Query 012735
Match_columns 457
No_of_seqs 130 out of 1283
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 15:13:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012735.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012735hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 4.4E-69 1.5E-73 522.2 31.8 436 1-447 8-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 7.7E-64 2.6E-68 495.9 33.8 440 5-449 7-480 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 3E-61 1E-65 475.6 40.6 442 1-448 1-469 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 1.1E-61 3.8E-66 475.6 32.3 438 1-449 1-453 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 4.8E-58 1.6E-62 451.1 35.7 426 5-447 8-462 (463)
6 4amg_A Snogd; transferase, pol 100.0 8.2E-46 2.8E-50 360.2 26.3 358 5-444 21-397 (400)
7 2iya_A OLEI, oleandomycin glyc 100.0 2.9E-45 1E-49 358.9 27.8 397 5-448 11-422 (424)
8 1iir_A Glycosyltransferase GTF 100.0 6.9E-43 2.4E-47 340.8 21.9 378 7-448 1-401 (415)
9 3rsc_A CALG2; TDP, enediyne, s 100.0 2.5E-41 8.4E-46 330.2 25.4 379 4-448 18-414 (415)
10 1rrv_A Glycosyltransferase GTF 100.0 1.1E-41 3.8E-46 332.5 19.4 375 7-447 1-401 (416)
11 3ia7_A CALG4; glycosysltransfe 100.0 2.5E-40 8.6E-45 321.7 26.7 377 6-448 4-399 (402)
12 2yjn_A ERYCIII, glycosyltransf 100.0 3.6E-40 1.2E-44 324.2 26.2 374 5-449 19-437 (441)
13 3h4t_A Glycosyltransferase GTF 100.0 1.3E-40 4.4E-45 323.2 18.6 368 7-450 1-385 (404)
14 2p6p_A Glycosyl transferase; X 100.0 2E-39 6.7E-44 313.4 23.7 357 7-451 1-383 (384)
15 2iyf_A OLED, oleandomycin glyc 100.0 1.9E-38 6.6E-43 311.1 26.7 380 6-447 7-399 (430)
16 4fzr_A SSFS6; structural genom 100.0 1.1E-37 3.7E-42 302.6 17.3 355 4-443 13-396 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 4.3E-37 1.5E-41 298.4 20.5 353 4-446 18-396 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 2.6E-35 9E-40 285.2 19.9 356 6-447 1-388 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 4.6E-33 1.6E-37 271.4 26.1 360 4-448 18-409 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 1.2E-29 4.1E-34 242.0 22.0 339 7-451 3-360 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 1.2E-27 4E-32 203.2 13.2 160 249-426 8-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 5.2E-21 1.8E-25 182.9 20.2 340 6-451 6-359 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 2.5E-15 8.5E-20 135.9 14.2 116 261-391 156-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 5.7E-16 2E-20 134.3 9.0 132 260-406 26-197 (224)
25 2gek_A Phosphatidylinositol ma 99.5 9.9E-12 3.4E-16 120.0 23.6 341 2-449 16-383 (406)
26 3c48_A Predicted glycosyltrans 99.5 3E-11 1E-15 117.9 26.7 368 3-448 17-424 (438)
27 3fro_A GLGA glycogen synthase; 99.4 1.3E-10 4.4E-15 113.3 28.3 382 5-450 1-431 (439)
28 3okp_A GDP-mannose-dependent a 99.4 6.3E-11 2.2E-15 113.8 20.9 345 5-450 3-380 (394)
29 2jjm_A Glycosyl transferase, g 99.3 1.6E-09 5.5E-14 104.1 27.9 348 6-449 15-385 (394)
30 1v4v_A UDP-N-acetylglucosamine 99.3 3.6E-11 1.2E-15 115.0 15.0 134 261-417 197-340 (376)
31 2iw1_A Lipopolysaccharide core 99.2 1.8E-10 6.2E-15 109.8 16.4 160 262-448 195-370 (374)
32 3ot5_A UDP-N-acetylglucosamine 99.2 5.2E-11 1.8E-15 114.5 12.0 109 322-447 282-393 (403)
33 2r60_A Glycosyl transferase, g 99.2 2.3E-09 7.9E-14 106.4 24.0 168 264-449 263-459 (499)
34 3dzc_A UDP-N-acetylglucosamine 99.2 6.5E-11 2.2E-15 113.6 11.8 157 261-447 229-395 (396)
35 1vgv_A UDP-N-acetylglucosamine 99.2 4.3E-11 1.5E-15 114.7 9.9 164 261-450 204-377 (384)
36 2iuy_A Avigt4, glycosyltransfe 99.2 1.1E-09 3.9E-14 103.0 19.3 148 265-448 164-334 (342)
37 3beo_A UDP-N-acetylglucosamine 99.2 4.4E-10 1.5E-14 107.2 16.5 162 261-446 204-373 (375)
38 2x6q_A Trehalose-synthase TRET 99.0 9.1E-08 3.1E-12 92.5 24.7 111 322-449 293-414 (416)
39 3s28_A Sucrose synthase 1; gly 98.9 5.3E-08 1.8E-12 100.6 17.5 168 263-451 572-771 (816)
40 4hwg_A UDP-N-acetylglucosamine 98.9 3.8E-09 1.3E-13 100.6 7.9 157 262-446 203-374 (385)
41 3oy2_A Glycosyltransferase B73 98.8 3.5E-07 1.2E-11 88.2 19.5 111 324-449 256-390 (413)
42 2vsy_A XCC0866; transferase, g 98.6 2.5E-05 8.4E-10 78.6 28.7 117 322-449 434-559 (568)
43 2hy7_A Glucuronosyltransferase 98.6 3.6E-06 1.2E-10 80.9 19.2 73 322-408 265-352 (406)
44 1rzu_A Glycogen synthase 1; gl 98.6 7.7E-07 2.7E-11 87.8 14.3 158 264-449 292-475 (485)
45 2qzs_A Glycogen synthase; glyc 98.5 1.7E-06 5.8E-11 85.3 15.6 161 263-450 292-477 (485)
46 2f9f_A First mannosyl transfer 98.5 3.2E-07 1.1E-11 77.3 7.6 127 265-408 25-162 (177)
47 2xci_A KDO-transferase, 3-deox 98.4 3.1E-05 1.1E-09 73.4 20.7 95 324-425 262-363 (374)
48 4gyw_A UDP-N-acetylglucosamine 98.0 0.00012 4E-09 75.4 16.2 172 260-449 520-705 (723)
49 3qhp_A Type 1 capsular polysac 97.9 3.2E-05 1.1E-09 63.9 8.6 142 263-425 2-158 (166)
50 2bfw_A GLGA glycogen synthase; 97.7 0.00019 6.6E-09 61.1 10.8 77 323-408 96-181 (200)
51 3tov_A Glycosyl transferase fa 97.4 0.0038 1.3E-07 58.3 15.3 105 5-130 7-115 (349)
52 3q3e_A HMW1C-like glycosyltran 97.4 0.0018 6E-08 64.2 13.3 133 263-408 441-588 (631)
53 1psw_A ADP-heptose LPS heptosy 97.3 0.0016 5.5E-08 60.8 11.7 103 7-130 1-106 (348)
54 3rhz_A GTF3, nucleotide sugar 97.2 0.00051 1.7E-08 63.8 6.4 110 323-445 215-336 (339)
55 3vue_A GBSS-I, granule-bound s 95.6 0.028 9.7E-07 55.6 8.2 166 264-450 328-512 (536)
56 2gt1_A Lipopolysaccharide hept 95.5 0.049 1.7E-06 50.0 9.2 49 7-55 1-51 (326)
57 2x0d_A WSAF; GT4 family, trans 94.3 0.032 1.1E-06 53.2 4.4 84 322-417 295-385 (413)
58 3ty2_A 5'-nucleotidase SURE; s 92.8 0.36 1.2E-05 42.0 7.9 46 1-48 6-51 (261)
59 3vue_A GBSS-I, granule-bound s 90.5 0.31 1.1E-05 48.1 5.7 42 4-45 7-54 (536)
60 3nb0_A Glycogen [starch] synth 89.9 1.5 5.2E-05 43.9 10.0 107 328-448 499-632 (725)
61 2phj_A 5'-nucleotidase SURE; S 89.0 3.5 0.00012 35.7 10.4 110 7-134 2-128 (251)
62 2x0d_A WSAF; GT4 family, trans 87.1 0.34 1.1E-05 46.1 3.2 40 4-43 44-88 (413)
63 3vot_A L-amino acid ligase, BL 86.5 4.3 0.00015 38.4 10.7 99 1-128 1-101 (425)
64 2e6c_A 5'-nucleotidase SURE; S 86.2 7.1 0.00024 33.7 10.7 54 7-62 1-58 (244)
65 1kjn_A MTH0777; hypotethical p 85.2 1.3 4.4E-05 34.5 4.9 43 1-43 1-45 (157)
66 1o4v_A Phosphoribosylaminoimid 84.8 14 0.00049 29.9 12.1 139 263-430 14-164 (183)
67 1xmp_A PURE, phosphoribosylami 84.6 14 0.00047 29.6 11.6 140 262-430 11-164 (170)
68 2wqk_A 5'-nucleotidase SURE; S 84.3 3.3 0.00011 36.0 7.8 109 8-134 3-128 (251)
69 1g5t_A COB(I)alamin adenosyltr 83.7 2.8 9.4E-05 34.9 6.8 99 5-115 27-131 (196)
70 1j9j_A Stationary phase surviV 82.9 14 0.00047 31.9 11.1 53 7-61 1-57 (247)
71 3fgn_A Dethiobiotin synthetase 82.0 14 0.00047 32.1 11.0 38 5-42 24-63 (251)
72 3zqu_A Probable aromatic acid 81.3 2.2 7.4E-05 36.0 5.3 38 5-43 3-40 (209)
73 3qxc_A Dethiobiotin synthetase 81.2 15 0.00051 31.7 10.8 36 7-42 21-58 (242)
74 1l5x_A SurviVal protein E; str 79.8 13 0.00043 32.9 9.9 40 7-48 1-40 (280)
75 3iqw_A Tail-anchored protein t 76.0 8.1 0.00028 35.2 7.9 39 5-43 14-53 (334)
76 1mvl_A PPC decarboxylase athal 75.8 3.1 0.0001 35.1 4.6 37 6-44 19-55 (209)
77 2gk4_A Conserved hypothetical 74.7 13 0.00045 31.7 8.3 24 21-44 30-53 (232)
78 1u11_A PURE (N5-carboxyaminoim 74.2 33 0.0011 27.7 11.7 140 263-431 22-175 (182)
79 3lqk_A Dipicolinate synthase s 73.8 4.9 0.00017 33.6 5.3 40 5-45 6-46 (201)
80 2yxb_A Coenzyme B12-dependent 73.6 3.3 0.00011 33.3 4.1 38 5-42 17-54 (161)
81 3mc3_A DSRE/DSRF-like family p 73.3 5.2 0.00018 30.9 5.1 39 5-43 14-55 (134)
82 3qjg_A Epidermin biosynthesis 72.7 4 0.00014 33.3 4.4 37 7-44 6-42 (175)
83 2v4n_A Multifunctional protein 72.6 29 0.001 30.0 10.1 40 7-48 2-41 (254)
84 4dzz_A Plasmid partitioning pr 72.4 19 0.00065 29.6 8.9 36 8-43 3-39 (206)
85 4b4o_A Epimerase family protei 72.3 4.8 0.00017 35.8 5.4 32 7-42 1-32 (298)
86 1ccw_A Protein (glutamate muta 71.8 5.8 0.0002 30.8 5.1 37 6-42 3-39 (137)
87 3pdi_B Nitrogenase MOFE cofact 70.9 30 0.001 33.0 10.8 88 6-132 313-400 (458)
88 3mcu_A Dipicolinate synthase, 70.7 4 0.00014 34.2 4.1 39 5-44 4-43 (207)
89 2i2x_B MTAC, methyltransferase 70.4 7.1 0.00024 34.1 5.9 40 4-43 121-160 (258)
90 1sbz_A Probable aromatic acid 69.5 5.7 0.0002 33.0 4.7 36 7-43 1-37 (197)
91 1y80_A Predicted cobalamin bin 69.3 6 0.0002 33.3 5.0 39 5-43 87-125 (210)
92 1p9o_A Phosphopantothenoylcyst 69.2 3.9 0.00013 36.8 3.9 38 7-44 37-89 (313)
93 2r8r_A Sensor protein; KDPD, P 69.1 7.4 0.00025 33.1 5.4 40 4-43 4-43 (228)
94 3llv_A Exopolyphosphatase-rela 68.9 3.1 0.00011 32.3 3.0 38 1-43 1-38 (141)
95 1fmt_A Methionyl-tRNA FMet for 67.8 17 0.0006 32.7 8.0 35 4-43 1-35 (314)
96 3t5t_A Putative glycosyltransf 67.3 28 0.00094 33.6 9.7 111 323-449 353-473 (496)
97 2q5c_A NTRC family transcripti 67.1 15 0.00051 30.4 6.9 42 87-135 129-170 (196)
98 2ejb_A Probable aromatic acid 66.7 10 0.00036 31.2 5.8 36 7-43 2-37 (189)
99 3io3_A DEHA2D07832P; chaperone 65.3 11 0.00039 34.5 6.4 39 5-43 16-57 (348)
100 1uqt_A Alpha, alpha-trehalose- 65.3 22 0.00075 34.2 8.7 105 327-449 337-454 (482)
101 2b8t_A Thymidine kinase; deoxy 64.2 40 0.0014 28.5 9.1 37 7-43 12-49 (223)
102 3ezx_A MMCP 1, monomethylamine 63.9 8.9 0.00031 32.4 5.0 40 4-43 90-129 (215)
103 2h31_A Multifunctional protein 63.4 88 0.003 29.3 11.9 138 261-427 264-411 (425)
104 1p3y_1 MRSD protein; flavoprot 62.9 5.8 0.0002 32.9 3.5 37 6-43 8-44 (194)
105 1id1_A Putative potassium chan 61.2 6.5 0.00022 30.9 3.5 33 6-43 3-35 (153)
106 3dm5_A SRP54, signal recogniti 60.9 15 0.00051 34.9 6.4 38 6-43 100-137 (443)
107 3igf_A ALL4481 protein; two-do 60.5 4.2 0.00014 37.8 2.5 36 7-42 2-38 (374)
108 4grd_A N5-CAIR mutase, phospho 60.4 64 0.0022 25.8 10.8 139 261-428 11-163 (173)
109 3auf_A Glycinamide ribonucleot 60.2 43 0.0015 28.5 8.6 106 4-134 20-132 (229)
110 1qzu_A Hypothetical protein MD 59.8 7 0.00024 32.8 3.5 39 5-44 18-57 (206)
111 1g63_A Epidermin modifying enz 59.3 7.5 0.00026 31.8 3.5 37 7-44 3-39 (181)
112 2ywx_A Phosphoribosylaminoimid 59.0 64 0.0022 25.4 11.2 131 265-427 2-143 (157)
113 2qs7_A Uncharacterized protein 58.3 15 0.0005 28.7 5.0 38 6-43 7-45 (144)
114 3ors_A N5-carboxyaminoimidazol 58.2 68 0.0023 25.4 10.3 137 263-427 4-153 (163)
115 3dfu_A Uncharacterized protein 57.5 9.6 0.00033 32.6 4.0 36 1-42 2-37 (232)
116 3trh_A Phosphoribosylaminoimid 56.7 74 0.0025 25.4 12.2 136 263-427 7-156 (169)
117 2i2c_A Probable inorganic poly 56.6 6.4 0.00022 34.7 2.9 52 339-408 36-93 (272)
118 2q5c_A NTRC family transcripti 56.3 17 0.00057 30.2 5.3 28 339-369 52-79 (196)
119 1lss_A TRK system potassium up 55.9 7.8 0.00027 29.6 3.1 33 5-42 3-35 (140)
120 3lp6_A Phosphoribosylaminoimid 55.9 78 0.0027 25.4 12.0 137 263-427 8-155 (174)
121 3kuu_A Phosphoribosylaminoimid 55.9 78 0.0027 25.4 11.3 140 263-431 13-166 (174)
122 1dhr_A Dihydropteridine reduct 55.2 12 0.00042 31.9 4.5 40 1-43 1-40 (241)
123 3eag_A UDP-N-acetylmuramate:L- 55.1 12 0.00042 33.8 4.7 35 5-43 3-37 (326)
124 2lnd_A De novo designed protei 54.8 13 0.00044 25.1 3.4 49 359-407 50-100 (112)
125 2ywr_A Phosphoribosylglycinami 54.4 39 0.0013 28.4 7.4 103 7-134 2-111 (216)
126 3u7q_B Nitrogenase molybdenum- 53.1 1.1E+02 0.0036 29.8 11.1 33 6-43 364-396 (523)
127 3l4e_A Uncharacterized peptida 52.9 21 0.00072 29.8 5.4 44 253-296 19-62 (206)
128 2iz6_A Molybdenum cofactor car 51.9 19 0.00063 29.3 4.7 76 326-407 93-173 (176)
129 3n7t_A Macrophage binding prot 51.4 29 0.001 29.9 6.2 38 6-43 9-57 (247)
130 1qkk_A DCTD, C4-dicarboxylate 51.2 45 0.0015 25.5 7.0 48 359-408 74-121 (155)
131 2g1u_A Hypothetical protein TM 50.9 15 0.00052 28.8 4.1 33 6-43 19-51 (155)
132 3ew7_A LMO0794 protein; Q8Y8U8 50.9 22 0.00076 29.4 5.4 33 7-43 1-33 (221)
133 3fwz_A Inner membrane protein 50.1 11 0.00037 29.1 3.0 33 6-43 7-39 (140)
134 3e8x_A Putative NAD-dependent 49.8 24 0.00083 29.8 5.5 34 6-43 21-54 (236)
135 4g6h_A Rotenone-insensitive NA 49.5 10 0.00034 36.9 3.3 36 3-43 39-74 (502)
136 2pju_A Propionate catabolism o 49.4 11 0.00038 32.1 3.1 67 339-408 64-153 (225)
137 4eg0_A D-alanine--D-alanine li 49.2 25 0.00087 31.5 5.8 41 3-43 10-54 (317)
138 3h2s_A Putative NADH-flavin re 48.8 25 0.00086 29.3 5.4 33 7-43 1-33 (224)
139 1hdo_A Biliverdin IX beta redu 48.7 56 0.0019 26.4 7.6 33 7-43 4-36 (206)
140 1rpn_A GDP-mannose 4,6-dehydra 48.5 23 0.00078 31.8 5.4 37 3-43 11-47 (335)
141 4b4k_A N5-carboxyaminoimidazol 48.3 1.1E+02 0.0036 24.8 11.1 140 262-429 22-174 (181)
142 3dhn_A NAD-dependent epimerase 48.2 35 0.0012 28.4 6.3 34 6-43 4-37 (227)
143 2nly_A BH1492 protein, diverge 48.2 93 0.0032 26.7 8.8 37 88-130 116-155 (245)
144 3kjh_A CO dehydrogenase/acetyl 47.8 13 0.00045 31.7 3.5 37 7-43 1-37 (254)
145 3of5_A Dethiobiotin synthetase 47.8 20 0.00069 30.5 4.6 37 5-41 2-40 (228)
146 4id9_A Short-chain dehydrogena 47.7 19 0.00065 32.6 4.8 35 5-43 18-52 (347)
147 3s40_A Diacylglycerol kinase; 47.4 36 0.0012 30.3 6.4 80 264-368 12-97 (304)
148 3lrx_A Putative hydrogenase; a 47.4 19 0.00065 28.5 4.1 35 6-43 23-57 (158)
149 1pno_A NAD(P) transhydrogenase 47.1 25 0.00086 27.9 4.4 38 6-43 23-63 (180)
150 1wcv_1 SOJ, segregation protei 46.7 17 0.00059 31.4 4.1 43 1-43 1-44 (257)
151 4dll_A 2-hydroxy-3-oxopropiona 45.7 24 0.00081 31.8 5.0 33 5-42 30-62 (320)
152 2vqe_B 30S ribosomal protein S 45.6 1.5E+02 0.005 25.6 10.2 31 104-134 158-190 (256)
153 1d4o_A NADP(H) transhydrogenas 45.3 26 0.00089 27.9 4.3 38 6-43 22-62 (184)
154 3s2u_A UDP-N-acetylglucosamine 44.1 44 0.0015 30.6 6.7 26 338-365 92-120 (365)
155 1mio_B Nitrogenase molybdenum 43.9 1.3E+02 0.0043 28.6 10.0 90 6-132 312-410 (458)
156 2bru_C NAD(P) transhydrogenase 43.7 28 0.00096 27.8 4.3 38 6-43 30-70 (186)
157 2hmt_A YUAA protein; RCK, KTN, 43.3 13 0.00045 28.3 2.6 34 5-43 5-38 (144)
158 4hb9_A Similarities with proba 43.2 16 0.00054 33.9 3.5 30 7-41 2-31 (412)
159 3qrx_B Melittin; calcium-bindi 43.2 8.9 0.0003 19.3 0.9 17 349-365 1-17 (26)
160 2x4g_A Nucleoside-diphosphate- 43.1 34 0.0011 30.7 5.7 34 6-43 13-46 (342)
161 1mio_A Nitrogenase molybdenum 42.9 1.2E+02 0.004 29.6 9.6 35 6-45 335-369 (533)
162 3zq6_A Putative arsenical pump 42.9 32 0.0011 31.0 5.4 42 3-44 9-52 (324)
163 3pdi_A Nitrogenase MOFE cofact 42.9 1.2E+02 0.004 29.2 9.6 33 6-43 332-364 (483)
164 3d7l_A LIN1944 protein; APC893 42.8 35 0.0012 27.9 5.3 34 5-43 2-35 (202)
165 1qgu_B Protein (nitrogenase mo 42.8 1.8E+02 0.006 28.2 10.9 33 6-43 360-392 (519)
166 1tvm_A PTS system, galactitol- 42.8 97 0.0033 22.7 8.0 60 5-65 20-80 (113)
167 2fsv_C NAD(P) transhydrogenase 42.7 29 0.001 28.2 4.3 38 6-43 46-86 (203)
168 3obb_A Probable 3-hydroxyisobu 42.6 27 0.00091 31.2 4.7 32 6-42 3-34 (300)
169 1djl_A Transhydrogenase DIII; 42.5 30 0.001 28.3 4.3 38 6-43 45-85 (207)
170 3dqp_A Oxidoreductase YLBE; al 42.4 30 0.001 28.8 4.9 33 7-43 1-33 (219)
171 2c5a_A GDP-mannose-3', 5'-epim 42.4 65 0.0022 29.5 7.6 35 5-43 28-62 (379)
172 3end_A Light-independent proto 41.8 29 0.00098 30.9 4.9 38 6-43 41-78 (307)
173 2qyt_A 2-dehydropantoate 2-red 41.4 12 0.00041 33.5 2.3 36 1-42 4-45 (317)
174 3hwr_A 2-dehydropantoate 2-red 41.4 19 0.00063 32.5 3.5 31 5-40 18-48 (318)
175 3rg8_A Phosphoribosylaminoimid 41.2 1.3E+02 0.0045 23.7 11.5 137 263-427 3-148 (159)
176 3lyu_A Putative hydrogenase; t 41.0 35 0.0012 26.3 4.7 33 6-40 18-50 (142)
177 2r85_A PURP protein PF1517; AT 40.6 27 0.00093 31.3 4.6 32 6-43 2-33 (334)
178 3vps_A TUNA, NAD-dependent epi 40.4 33 0.0011 30.4 5.2 34 6-43 7-40 (321)
179 3ko8_A NAD-dependent epimerase 40.3 57 0.002 28.7 6.7 33 7-43 1-33 (312)
180 3sbx_A Putative uncharacterize 40.2 41 0.0014 27.6 5.1 40 2-42 9-52 (189)
181 1u7z_A Coenzyme A biosynthesis 40.2 35 0.0012 28.9 4.8 23 21-43 35-57 (226)
182 3hn2_A 2-dehydropantoate 2-red 40.0 23 0.00078 31.7 3.9 32 7-43 3-34 (312)
183 4g65_A TRK system potassium up 40.0 7.9 0.00027 37.1 0.8 35 4-43 1-35 (461)
184 2ew2_A 2-dehydropantoate 2-red 40.0 20 0.00068 31.9 3.5 32 6-42 3-34 (316)
185 3gpi_A NAD-dependent epimerase 39.8 34 0.0012 29.8 5.0 46 6-60 3-48 (286)
186 3czc_A RMPB; alpha/beta sandwi 39.8 29 0.001 25.5 3.8 41 2-42 14-56 (110)
187 3tqr_A Phosphoribosylglycinami 39.5 75 0.0026 26.6 6.7 110 1-134 1-114 (215)
188 1z82_A Glycerol-3-phosphate de 38.9 22 0.00075 32.2 3.6 32 6-42 14-45 (335)
189 3av3_A Phosphoribosylglycinami 38.8 1.1E+02 0.0039 25.4 7.8 105 6-134 3-113 (212)
190 3l7i_A Teichoic acid biosynthe 38.5 17 0.00058 37.1 3.1 113 327-450 604-722 (729)
191 1vl0_A DTDP-4-dehydrorhamnose 38.4 26 0.0009 30.6 4.0 35 4-42 10-44 (292)
192 3i83_A 2-dehydropantoate 2-red 38.2 22 0.00077 31.9 3.6 32 7-43 3-34 (320)
193 3f67_A Putative dienelactone h 38.2 47 0.0016 27.5 5.5 37 6-42 31-67 (241)
194 1yt5_A Inorganic polyphosphate 38.1 9.8 0.00034 33.2 1.1 53 338-408 41-96 (258)
195 4gbj_A 6-phosphogluconate dehy 37.9 30 0.001 30.7 4.3 30 8-42 7-36 (297)
196 3l77_A Short-chain alcohol deh 37.9 37 0.0013 28.6 4.8 33 7-42 2-34 (235)
197 1jx7_A Hypothetical protein YC 37.7 37 0.0013 24.8 4.2 27 17-43 15-43 (117)
198 2dpo_A L-gulonate 3-dehydrogen 37.6 22 0.00074 32.1 3.3 38 1-43 1-38 (319)
199 3da8_A Probable 5'-phosphoribo 37.5 37 0.0013 28.5 4.5 110 2-134 8-120 (215)
200 3zzm_A Bifunctional purine bio 37.5 15 0.00052 35.1 2.2 99 6-114 9-112 (523)
201 3h7a_A Short chain dehydrogena 37.4 39 0.0013 29.0 4.9 34 6-42 6-39 (252)
202 4da9_A Short-chain dehydrogena 37.3 46 0.0016 29.1 5.4 34 6-42 28-61 (280)
203 1ks9_A KPA reductase;, 2-dehyd 37.2 24 0.00081 31.0 3.5 32 7-43 1-32 (291)
204 3bul_A Methionine synthase; tr 37.2 34 0.0012 33.6 4.8 39 5-43 97-135 (579)
205 2hy5_A Putative sulfurtransfer 37.1 51 0.0017 24.9 5.0 34 10-43 5-41 (130)
206 2raf_A Putative dinucleotide-b 37.0 26 0.00088 29.2 3.5 33 5-42 18-50 (209)
207 3h4t_A Glycosyltransferase GTF 36.9 2E+02 0.007 26.3 10.2 89 7-131 221-310 (404)
208 2bon_A Lipid kinase; DAG kinas 36.9 49 0.0017 29.9 5.6 68 278-369 44-119 (332)
209 3k96_A Glycerol-3-phosphate de 36.8 21 0.00071 32.8 3.1 34 5-43 28-61 (356)
210 2b69_A UDP-glucuronate decarbo 36.6 47 0.0016 29.9 5.5 35 5-43 26-60 (343)
211 1u0t_A Inorganic polyphosphate 36.5 12 0.00043 33.5 1.5 56 335-408 72-131 (307)
212 3ruf_A WBGU; rossmann fold, UD 36.3 49 0.0017 29.8 5.7 34 6-43 25-58 (351)
213 3l4b_C TRKA K+ channel protien 36.3 13 0.00044 31.2 1.5 32 7-43 1-32 (218)
214 2vns_A Metalloreductase steap3 36.2 23 0.0008 29.6 3.1 33 5-42 27-59 (215)
215 3doj_A AT3G25530, dehydrogenas 36.1 30 0.001 30.9 4.0 33 5-42 20-52 (310)
216 3oow_A Phosphoribosylaminoimid 36.0 1.6E+02 0.0056 23.3 13.2 141 263-431 6-159 (166)
217 1f0y_A HCDH, L-3-hydroxyacyl-C 36.0 23 0.00079 31.5 3.2 33 5-42 14-46 (302)
218 2fb6_A Conserved hypothetical 36.0 36 0.0012 25.4 3.8 37 7-43 8-48 (117)
219 2an1_A Putative kinase; struct 35.9 14 0.00049 32.7 1.8 56 335-408 60-119 (292)
220 2l2q_A PTS system, cellobiose- 35.9 55 0.0019 23.8 4.8 37 6-42 4-40 (109)
221 4b79_A PA4098, probable short- 35.8 1.2E+02 0.0041 25.9 7.6 35 6-43 10-44 (242)
222 4hv4_A UDP-N-acetylmuramate--L 35.8 41 0.0014 32.4 5.2 35 4-42 20-54 (494)
223 3qvo_A NMRA family protein; st 35.8 71 0.0024 26.8 6.3 22 22-43 35-57 (236)
224 3i4f_A 3-oxoacyl-[acyl-carrier 35.6 50 0.0017 28.4 5.3 39 1-42 1-39 (264)
225 3enk_A UDP-glucose 4-epimerase 35.2 56 0.0019 29.2 5.8 34 5-42 4-37 (341)
226 2p90_A Hypothetical protein CG 35.0 2.5E+02 0.0084 25.1 11.0 133 262-408 102-251 (319)
227 3g0o_A 3-hydroxyisobutyrate de 34.8 22 0.00075 31.7 2.9 33 5-42 6-38 (303)
228 3ucx_A Short chain dehydrogena 34.6 55 0.0019 28.2 5.5 34 6-42 10-43 (264)
229 3tl4_X Glutaminyl-tRNA synthet 34.6 66 0.0023 26.3 5.4 33 371-408 100-132 (187)
230 2lpm_A Two-component response 34.5 27 0.00094 26.3 3.0 38 91-132 44-86 (123)
231 3ghy_A Ketopantoate reductase 34.4 25 0.00086 31.8 3.3 33 6-43 3-35 (335)
232 3tzq_B Short-chain type dehydr 34.4 49 0.0017 28.7 5.1 35 6-43 10-44 (271)
233 4e5v_A Putative THUA-like prot 34.2 48 0.0016 29.2 4.9 39 4-43 2-43 (281)
234 2x5n_A SPRPN10, 26S proteasome 34.1 58 0.002 26.7 5.2 35 9-43 110-144 (192)
235 2d1p_A TUSD, hypothetical UPF0 34.1 72 0.0025 24.6 5.4 38 6-43 12-53 (140)
236 3rfo_A Methionyl-tRNA formyltr 34.0 53 0.0018 29.5 5.2 35 4-43 2-36 (317)
237 2qv7_A Diacylglycerol kinase D 34.0 32 0.0011 31.2 3.9 81 264-368 28-114 (337)
238 3slg_A PBGP3 protein; structur 33.9 67 0.0023 29.2 6.2 34 6-43 24-58 (372)
239 3cky_A 2-hydroxymethyl glutara 33.7 44 0.0015 29.4 4.8 33 5-42 3-35 (301)
240 2h78_A Hibadh, 3-hydroxyisobut 33.7 34 0.0012 30.3 4.0 33 5-42 2-34 (302)
241 3k9g_A PF-32 protein; ssgcid, 33.6 35 0.0012 29.5 4.0 38 5-43 25-64 (267)
242 3oh8_A Nucleoside-diphosphate 33.5 54 0.0019 31.7 5.7 34 6-43 147-180 (516)
243 3to5_A CHEY homolog; alpha(5)b 33.5 1.2E+02 0.0041 23.0 6.6 54 352-407 74-132 (134)
244 3p19_A BFPVVD8, putative blue 33.5 44 0.0015 29.0 4.6 35 6-43 15-49 (266)
245 2ew8_A (S)-1-phenylethanol deh 33.4 53 0.0018 28.0 5.1 34 6-42 6-39 (249)
246 3n0v_A Formyltetrahydrofolate 33.4 1.4E+02 0.0048 26.2 7.8 107 3-134 87-197 (286)
247 3ius_A Uncharacterized conserv 33.4 48 0.0017 28.8 4.9 33 6-43 5-37 (286)
248 3uve_A Carveol dehydrogenase ( 33.3 55 0.0019 28.6 5.3 34 6-42 10-43 (286)
249 2w36_A Endonuclease V; hypoxan 33.3 70 0.0024 27.0 5.5 31 104-134 103-140 (225)
250 1yb4_A Tartronic semialdehyde 33.1 32 0.0011 30.3 3.7 32 5-41 2-33 (295)
251 3ic5_A Putative saccharopine d 33.1 67 0.0023 23.1 5.0 34 5-43 4-38 (118)
252 3m2p_A UDP-N-acetylglucosamine 33.0 60 0.002 28.6 5.5 33 7-43 3-35 (311)
253 3lf2_A Short chain oxidoreduct 32.9 54 0.0018 28.3 5.1 34 6-42 7-40 (265)
254 3qsg_A NAD-binding phosphogluc 32.8 24 0.00082 31.6 2.8 33 5-42 23-56 (312)
255 3nyw_A Putative oxidoreductase 32.8 40 0.0014 28.8 4.2 39 1-42 1-39 (250)
256 1zi8_A Carboxymethylenebutenol 32.8 64 0.0022 26.5 5.5 38 6-43 27-64 (236)
257 3ug7_A Arsenical pump-driving 32.8 57 0.0019 29.7 5.4 40 5-44 24-64 (349)
258 3t7c_A Carveol dehydrogenase; 32.8 59 0.002 28.7 5.4 34 6-42 27-60 (299)
259 3grc_A Sensor protein, kinase; 32.7 97 0.0033 22.9 6.1 48 360-408 80-127 (140)
260 2hy5_B Intracellular sulfur ox 32.6 65 0.0022 24.7 4.9 36 8-43 7-45 (136)
261 3kkl_A Probable chaperone prot 32.6 70 0.0024 27.4 5.6 38 6-43 3-51 (244)
262 3dtt_A NADP oxidoreductase; st 32.2 28 0.00097 29.8 3.1 33 6-43 19-51 (245)
263 2vo1_A CTP synthase 1; pyrimid 32.2 53 0.0018 28.6 4.5 39 5-43 21-62 (295)
264 3f8d_A Thioredoxin reductase ( 32.1 31 0.0011 30.5 3.5 32 7-43 16-47 (323)
265 3kcn_A Adenylate cyclase homol 32.0 1E+02 0.0035 23.2 6.3 48 359-408 75-123 (151)
266 2pzm_A Putative nucleotide sug 32.0 55 0.0019 29.3 5.1 34 6-43 20-53 (330)
267 2pd6_A Estradiol 17-beta-dehyd 31.7 64 0.0022 27.5 5.4 34 6-42 6-39 (264)
268 1bg6_A N-(1-D-carboxylethyl)-L 31.6 33 0.0011 31.2 3.6 32 6-42 4-35 (359)
269 2d1p_B TUSC, hypothetical UPF0 31.6 81 0.0028 23.3 5.2 35 9-43 5-41 (119)
270 3ftp_A 3-oxoacyl-[acyl-carrier 31.6 75 0.0026 27.5 5.8 34 6-42 27-60 (270)
271 3t4x_A Oxidoreductase, short c 31.6 69 0.0023 27.6 5.6 34 6-42 9-42 (267)
272 3lk7_A UDP-N-acetylmuramoylala 31.5 58 0.002 30.9 5.4 33 5-42 8-40 (451)
273 3o26_A Salutaridine reductase; 31.4 52 0.0018 28.9 4.8 35 6-43 11-45 (311)
274 1nff_A Putative oxidoreductase 31.4 72 0.0025 27.3 5.7 33 7-42 7-39 (260)
275 3c1o_A Eugenol synthase; pheny 31.4 38 0.0013 30.1 4.0 35 5-43 3-37 (321)
276 1cp2_A CP2, nitrogenase iron p 31.3 45 0.0015 28.7 4.3 37 7-43 2-38 (269)
277 2z1m_A GDP-D-mannose dehydrata 31.2 61 0.0021 28.9 5.4 33 7-43 4-36 (345)
278 3lyh_A Cobalamin (vitamin B12) 31.2 1.4E+02 0.0048 22.1 6.6 39 261-299 5-43 (126)
279 2rh8_A Anthocyanidin reductase 31.1 66 0.0022 28.7 5.6 32 7-42 10-41 (338)
280 2b9w_A Putative aminooxidase; 31.0 56 0.0019 30.4 5.2 37 1-42 1-38 (424)
281 3bfv_A CAPA1, CAPB2, membrane 31.0 72 0.0025 27.7 5.6 39 5-43 80-120 (271)
282 1jkx_A GART;, phosphoribosylgl 31.0 2.3E+02 0.0078 23.5 9.1 104 7-134 1-110 (212)
283 3obi_A Formyltetrahydrofolate 30.8 2.2E+02 0.0074 25.1 8.6 106 4-134 87-197 (288)
284 3guy_A Short-chain dehydrogena 30.8 42 0.0014 28.2 3.9 33 8-43 2-34 (230)
285 2jk1_A HUPR, hydrogenase trans 30.6 1.1E+02 0.0039 22.5 6.2 49 359-408 71-119 (139)
286 1y1p_A ARII, aldehyde reductas 30.6 70 0.0024 28.5 5.7 33 6-42 11-43 (342)
287 3ip0_A 2-amino-4-hydroxy-6-hyd 30.5 61 0.0021 25.7 4.4 28 264-291 2-29 (158)
288 3pnx_A Putative sulfurtransfer 30.4 70 0.0024 25.4 4.8 38 6-43 5-42 (160)
289 2qx0_A 7,8-dihydro-6-hydroxyme 30.2 86 0.0029 24.8 5.2 28 264-291 3-30 (159)
290 1f9y_A HPPK, protein (6-hydrox 30.2 63 0.0021 25.6 4.4 28 264-291 2-29 (158)
291 2ehd_A Oxidoreductase, oxidore 30.1 68 0.0023 26.8 5.2 32 8-42 6-37 (234)
292 1iow_A DD-ligase, DDLB, D-ALA\ 30.1 67 0.0023 28.2 5.4 38 6-43 2-43 (306)
293 3ego_A Probable 2-dehydropanto 30.1 30 0.001 30.9 3.0 32 6-43 2-33 (307)
294 1pzg_A LDH, lactate dehydrogen 29.9 29 0.00099 31.5 2.8 35 4-43 7-42 (331)
295 1fjh_A 3alpha-hydroxysteroid d 29.8 64 0.0022 27.4 5.1 32 8-42 2-33 (257)
296 3cio_A ETK, tyrosine-protein k 29.7 71 0.0024 28.3 5.4 38 7-44 105-143 (299)
297 4ao6_A Esterase; hydrolase, th 29.6 43 0.0015 28.7 3.8 39 5-43 54-94 (259)
298 4h15_A Short chain alcohol deh 29.5 64 0.0022 27.9 4.9 34 6-42 10-43 (261)
299 2r6j_A Eugenol synthase 1; phe 29.4 47 0.0016 29.5 4.2 32 8-43 13-44 (318)
300 3ppi_A 3-hydroxyacyl-COA dehyd 29.4 66 0.0022 27.9 5.1 33 7-42 30-62 (281)
301 2q1w_A Putative nucleotide sug 29.4 73 0.0025 28.4 5.5 34 6-43 21-54 (333)
302 4e5s_A MCCFLIKE protein (BA_56 29.4 1.1E+02 0.0036 27.7 6.5 72 276-368 63-136 (331)
303 1i24_A Sulfolipid biosynthesis 29.3 68 0.0023 29.5 5.4 34 5-42 10-43 (404)
304 2wsb_A Galactitol dehydrogenas 29.2 76 0.0026 26.9 5.4 32 8-42 12-43 (254)
305 2afh_E Nitrogenase iron protei 29.2 57 0.002 28.5 4.7 37 7-43 3-39 (289)
306 2pk3_A GDP-6-deoxy-D-LYXO-4-he 29.2 72 0.0024 28.2 5.4 22 22-43 24-45 (321)
307 3hn7_A UDP-N-acetylmuramate-L- 29.2 49 0.0017 32.2 4.5 34 6-43 19-52 (524)
308 3nbm_A PTS system, lactose-spe 29.1 63 0.0022 23.6 4.0 57 4-61 4-60 (108)
309 1rkx_A CDP-glucose-4,6-dehydra 29.1 76 0.0026 28.6 5.7 34 6-43 9-42 (357)
310 3l18_A Intracellular protease 29.0 1.2E+02 0.0043 23.7 6.3 38 5-43 1-38 (168)
311 1xfi_A Unknown protein; struct 28.7 53 0.0018 30.2 4.4 38 6-43 212-250 (367)
312 3pfb_A Cinnamoyl esterase; alp 28.7 81 0.0028 26.5 5.5 37 7-43 46-84 (270)
313 3imf_A Short chain dehydrogena 28.7 66 0.0023 27.5 4.9 33 7-42 6-38 (257)
314 4h3k_B RNA polymerase II subun 28.7 2.5E+02 0.0085 23.2 10.2 38 3-43 22-59 (214)
315 4e3z_A Putative oxidoreductase 28.6 65 0.0022 27.8 4.9 34 6-42 25-58 (272)
316 3lou_A Formyltetrahydrofolate 28.6 2E+02 0.0067 25.4 7.9 106 4-134 93-202 (292)
317 4gi5_A Quinone reductase; prot 28.5 91 0.0031 27.4 5.7 37 6-42 22-61 (280)
318 1sb8_A WBPP; epimerase, 4-epim 28.5 80 0.0027 28.4 5.7 34 6-43 27-60 (352)
319 1o97_C Electron transferring f 28.4 65 0.0022 28.0 4.7 31 104-134 112-148 (264)
320 3vtz_A Glucose 1-dehydrogenase 28.4 77 0.0026 27.4 5.3 35 6-43 13-47 (269)
321 2ydy_A Methionine adenosyltran 28.4 69 0.0024 28.2 5.1 32 7-42 3-34 (315)
322 3afn_B Carbonyl reductase; alp 28.3 66 0.0023 27.3 4.9 39 1-42 1-39 (258)
323 2xxa_A Signal recognition part 28.3 88 0.003 29.5 6.0 38 6-43 100-138 (433)
324 1ehi_A LMDDL2, D-alanine:D-lac 28.3 55 0.0019 30.2 4.5 37 6-42 3-44 (377)
325 3h1g_A Chemotaxis protein CHEY 28.2 1.7E+02 0.0058 21.1 8.1 55 352-408 68-127 (129)
326 2etv_A Iron(III) ABC transport 28.2 45 0.0015 30.3 3.8 30 104-133 96-126 (346)
327 4hcj_A THIJ/PFPI domain protei 28.1 57 0.0019 26.3 4.0 38 5-43 7-44 (177)
328 1zem_A Xylitol dehydrogenase; 28.1 73 0.0025 27.3 5.1 33 7-42 7-39 (262)
329 2c20_A UDP-glucose 4-epimerase 27.9 78 0.0027 28.1 5.4 33 7-43 2-34 (330)
330 3qha_A Putative oxidoreductase 27.8 33 0.0011 30.4 2.8 32 6-42 15-46 (296)
331 1ooe_A Dihydropteridine reduct 27.8 64 0.0022 27.1 4.6 33 8-43 4-36 (236)
332 3d3j_A Enhancer of mRNA-decapp 27.8 50 0.0017 29.5 3.9 34 7-43 133-168 (306)
333 3f9i_A 3-oxoacyl-[acyl-carrier 27.7 85 0.0029 26.5 5.4 34 6-42 13-46 (249)
334 1jay_A Coenzyme F420H2:NADP+ o 27.7 44 0.0015 27.6 3.5 31 7-42 1-32 (212)
335 1txg_A Glycerol-3-phosphate de 27.7 34 0.0012 30.8 2.9 31 7-42 1-31 (335)
336 4dgk_A Phytoene dehydrogenase; 27.6 27 0.00094 33.5 2.4 30 7-41 2-31 (501)
337 3r6d_A NAD-dependent epimerase 27.6 91 0.0031 25.7 5.5 22 22-43 17-39 (221)
338 3i6i_A Putative leucoanthocyan 27.6 65 0.0022 29.0 4.9 34 6-43 10-43 (346)
339 2d1y_A Hypothetical protein TT 27.6 1.1E+02 0.0036 26.1 6.1 33 8-43 7-39 (256)
340 3foj_A Uncharacterized protein 27.5 1.1E+02 0.0039 21.4 5.3 33 6-42 56-88 (100)
341 3sc6_A DTDP-4-dehydrorhamnose 27.4 39 0.0013 29.4 3.2 32 7-42 6-37 (287)
342 1gsa_A Glutathione synthetase; 27.4 54 0.0018 28.9 4.2 37 7-43 2-41 (316)
343 3dii_A Short-chain dehydrogena 27.4 67 0.0023 27.3 4.7 32 8-42 3-34 (247)
344 3nrb_A Formyltetrahydrofolate 27.2 3.2E+02 0.011 23.9 11.1 106 4-134 86-196 (287)
345 4hn9_A Iron complex transport 27.2 48 0.0016 29.9 3.8 31 104-134 116-146 (335)
346 3qvl_A Putative hydantoin race 27.1 2.4E+02 0.0084 23.9 8.1 94 7-131 2-97 (245)
347 2bka_A CC3, TAT-interacting pr 27.1 1.2E+02 0.0042 25.2 6.4 33 7-43 19-53 (242)
348 2o6l_A UDP-glucuronosyltransfe 27.1 1.3E+02 0.0043 23.5 6.1 38 6-43 20-60 (170)
349 3edm_A Short chain dehydrogena 27.0 71 0.0024 27.4 4.8 33 7-42 8-40 (259)
350 3orf_A Dihydropteridine reduct 27.0 68 0.0023 27.3 4.6 34 7-43 22-55 (251)
351 2c29_D Dihydroflavonol 4-reduc 27.0 66 0.0023 28.7 4.8 34 5-42 4-37 (337)
352 3d3k_A Enhancer of mRNA-decapp 27.0 54 0.0019 28.4 3.9 34 7-43 86-121 (259)
353 3gem_A Short chain dehydrogena 26.9 55 0.0019 28.2 4.1 33 8-43 28-60 (260)
354 3la6_A Tyrosine-protein kinase 26.8 80 0.0027 27.7 5.1 38 7-44 93-131 (286)
355 2zki_A 199AA long hypothetical 26.7 64 0.0022 26.2 4.3 38 5-43 3-41 (199)
356 3sju_A Keto reductase; short-c 26.7 66 0.0022 28.0 4.6 33 7-42 24-56 (279)
357 1zmt_A Haloalcohol dehalogenas 26.7 51 0.0017 28.2 3.8 32 8-42 2-33 (254)
358 3qbc_A 2-amino-4-hydroxy-6-hyd 26.6 79 0.0027 25.1 4.4 29 263-291 5-33 (161)
359 1e2b_A Enzyme IIB-cellobiose; 26.6 1.6E+02 0.0053 21.3 5.9 38 6-43 3-40 (106)
360 3itj_A Thioredoxin reductase 1 26.6 30 0.001 30.9 2.4 33 5-42 21-53 (338)
361 3tsc_A Putative oxidoreductase 26.5 76 0.0026 27.5 5.0 34 6-42 10-43 (277)
362 1efv_B Electron transfer flavo 26.5 74 0.0025 27.5 4.7 31 104-134 116-152 (255)
363 1imj_A CIB, CCG1-interacting f 26.5 1.3E+02 0.0044 24.0 6.2 38 6-43 31-70 (210)
364 2a3d_A Protein (de novo three- 26.5 78 0.0027 19.7 3.4 31 412-446 5-35 (73)
365 2xdo_A TETX2 protein; tetracyc 26.5 48 0.0016 30.7 3.8 34 5-43 25-58 (398)
366 3pef_A 6-phosphogluconate dehy 26.4 46 0.0016 29.2 3.5 31 7-42 2-32 (287)
367 3l6d_A Putative oxidoreductase 26.4 35 0.0012 30.4 2.7 33 5-42 8-40 (306)
368 3fwy_A Light-independent proto 26.4 75 0.0026 28.4 4.9 38 6-43 48-85 (314)
369 3dfz_A SIRC, precorrin-2 dehyd 26.3 74 0.0025 26.8 4.5 34 5-43 30-63 (223)
370 3ado_A Lambda-crystallin; L-gu 26.3 34 0.0012 30.8 2.6 37 1-42 1-37 (319)
371 3ea0_A ATPase, para family; al 26.3 62 0.0021 27.3 4.2 39 6-44 3-44 (245)
372 1mxh_A Pteridine reductase 2; 26.3 73 0.0025 27.5 4.8 32 8-42 12-43 (276)
373 1e7w_A Pteridine reductase; di 26.2 76 0.0026 27.8 4.9 32 7-41 9-40 (291)
374 2p4h_X Vestitone reductase; NA 26.2 86 0.0029 27.6 5.4 32 7-42 2-33 (322)
375 3l9w_A Glutathione-regulated p 26.2 29 0.001 32.6 2.2 35 4-43 2-36 (413)
376 3rp8_A Flavoprotein monooxygen 26.2 46 0.0016 30.8 3.6 35 4-43 21-55 (407)
377 3tqq_A Methionyl-tRNA formyltr 26.2 64 0.0022 28.9 4.3 33 6-43 2-34 (314)
378 1cbk_A Protein (7,8-dihydro-6- 26.0 82 0.0028 25.0 4.4 28 264-291 3-30 (160)
379 3c85_A Putative glutathione-re 25.9 34 0.0012 27.5 2.4 33 6-43 39-72 (183)
380 2p5y_A UDP-glucose 4-epimerase 25.9 78 0.0027 27.8 5.0 32 7-42 1-32 (311)
381 3fkq_A NTRC-like two-domain pr 25.8 70 0.0024 29.4 4.7 38 6-43 142-181 (373)
382 1xq6_A Unknown protein; struct 25.8 1.1E+02 0.0039 25.5 5.9 35 5-43 3-39 (253)
383 2ag5_A DHRS6, dehydrogenase/re 25.8 1.1E+02 0.0037 25.8 5.8 32 8-42 7-38 (246)
384 3f6r_A Flavodoxin; FMN binding 25.7 75 0.0026 24.3 4.3 37 7-43 2-39 (148)
385 3s40_A Diacylglycerol kinase; 25.6 90 0.0031 27.7 5.3 43 1-43 3-48 (304)
386 3q0i_A Methionyl-tRNA formyltr 25.5 90 0.0031 28.0 5.2 34 5-43 6-39 (318)
387 1orr_A CDP-tyvelose-2-epimeras 25.5 89 0.0031 27.8 5.4 32 7-42 2-33 (347)
388 2q62_A ARSH; alpha/beta, flavo 25.5 92 0.0032 26.7 5.1 39 4-42 32-73 (247)
389 4dqx_A Probable oxidoreductase 25.5 76 0.0026 27.6 4.7 33 7-42 27-59 (277)
390 2rjn_A Response regulator rece 25.5 31 0.0011 26.5 2.0 48 359-408 78-126 (154)
391 4f0j_A Probable hydrolytic enz 25.5 70 0.0024 27.5 4.6 37 7-43 46-82 (315)
392 2o8n_A APOA-I binding protein; 25.4 62 0.0021 28.2 4.0 33 7-42 80-114 (265)
393 3f1l_A Uncharacterized oxidore 25.4 79 0.0027 26.9 4.8 33 7-42 12-44 (252)
394 3pdu_A 3-hydroxyisobutyrate de 25.4 49 0.0017 29.0 3.5 31 7-42 2-32 (287)
395 1g3q_A MIND ATPase, cell divis 25.3 78 0.0027 26.4 4.7 36 8-43 4-40 (237)
396 2f62_A Nucleoside 2-deoxyribos 25.3 2.5E+02 0.0085 22.1 8.5 35 5-39 8-45 (161)
397 4e12_A Diketoreductase; oxidor 25.1 62 0.0021 28.3 4.1 32 6-42 4-35 (283)
398 4iin_A 3-ketoacyl-acyl carrier 25.1 84 0.0029 27.1 5.0 32 8-42 30-61 (271)
399 3e9m_A Oxidoreductase, GFO/IDH 25.1 3.6E+02 0.012 23.8 9.9 109 263-391 7-125 (330)
400 1jzt_A Hypothetical 27.5 kDa p 25.0 54 0.0018 28.2 3.5 33 7-42 59-93 (246)
401 1qo0_D AMIR; binding protein, 25.0 2E+02 0.0069 22.8 7.1 54 353-408 69-125 (196)
402 3lzw_A Ferredoxin--NADP reduct 25.0 24 0.00082 31.5 1.3 33 6-43 7-39 (332)
403 2gas_A Isoflavone reductase; N 25.0 48 0.0016 29.1 3.4 34 6-43 2-35 (307)
404 1mv8_A GMD, GDP-mannose 6-dehy 25.0 68 0.0023 30.2 4.6 31 7-42 1-31 (436)
405 3tpc_A Short chain alcohol deh 24.9 1E+02 0.0035 26.3 5.4 35 6-43 6-40 (257)
406 1e4e_A Vancomycin/teicoplanin 24.9 46 0.0016 30.1 3.2 37 6-42 3-43 (343)
407 3rkr_A Short chain oxidoreduct 24.9 1.1E+02 0.0037 26.2 5.6 32 8-42 30-61 (262)
408 3g17_A Similar to 2-dehydropan 24.9 21 0.00072 31.7 0.9 32 7-43 3-34 (294)
409 2wtm_A EST1E; hydrolase; 1.60A 24.8 1E+02 0.0035 25.8 5.4 38 6-43 26-65 (251)
410 3ijr_A Oxidoreductase, short c 24.8 79 0.0027 27.7 4.7 34 7-43 47-80 (291)
411 3icc_A Putative 3-oxoacyl-(acy 24.7 86 0.0029 26.5 4.9 33 7-42 7-39 (255)
412 2gez_A L-asparaginase alpha su 24.7 1.5E+02 0.0051 24.3 5.9 22 431-452 47-68 (195)
413 3r5x_A D-alanine--D-alanine li 24.7 34 0.0012 30.3 2.3 39 5-43 2-44 (307)
414 1k2x_A Putative L-asparaginase 24.7 1.5E+02 0.0053 23.8 5.9 23 430-452 43-65 (177)
415 1x1t_A D(-)-3-hydroxybutyrate 24.7 81 0.0028 26.9 4.7 32 8-42 5-36 (260)
416 1gy8_A UDP-galactose 4-epimera 24.6 1E+02 0.0035 28.2 5.7 33 6-42 2-35 (397)
417 3md9_A Hemin-binding periplasm 24.6 62 0.0021 27.6 4.0 29 104-132 59-89 (255)
418 1vl8_A Gluconate 5-dehydrogena 24.6 92 0.0032 26.8 5.1 33 7-42 21-53 (267)
419 1wma_A Carbonyl reductase [NAD 24.6 87 0.003 26.7 5.0 34 7-43 4-38 (276)
420 3svt_A Short-chain type dehydr 24.5 88 0.003 27.1 5.0 34 6-42 10-43 (281)
421 3oig_A Enoyl-[acyl-carrier-pro 24.5 1.2E+02 0.004 26.0 5.8 36 6-42 6-41 (266)
422 2vdc_G Glutamate synthase [NAD 24.5 42 0.0014 31.9 3.0 35 4-43 120-154 (456)
423 3gl9_A Response regulator; bet 24.5 2E+02 0.0067 20.6 7.8 46 360-407 76-121 (122)
424 2bw0_A 10-FTHFDH, 10-formyltet 24.5 1E+02 0.0035 27.7 5.4 33 6-43 22-54 (329)
425 1efp_B ETF, protein (electron 24.4 75 0.0026 27.4 4.3 31 104-134 113-149 (252)
426 1qyc_A Phenylcoumaran benzylic 24.4 60 0.002 28.5 3.9 34 6-43 4-37 (308)
427 4ezb_A Uncharacterized conserv 24.4 48 0.0017 29.7 3.3 33 6-43 24-57 (317)
428 2x3n_A Probable FAD-dependent 24.4 42 0.0014 31.0 3.0 34 5-43 5-38 (399)
429 4h1h_A LMO1638 protein; MCCF-l 24.4 1.4E+02 0.0046 26.9 6.2 71 276-367 63-135 (327)
430 2dkn_A 3-alpha-hydroxysteroid 24.4 1.1E+02 0.0036 25.8 5.4 23 21-43 12-34 (255)
431 4e6p_A Probable sorbitol dehyd 24.4 1.3E+02 0.0045 25.6 6.0 33 7-42 8-40 (259)
432 4egf_A L-xylulose reductase; s 24.4 88 0.003 26.9 4.9 33 7-42 20-52 (266)
433 3q2i_A Dehydrogenase; rossmann 24.4 1.8E+02 0.0062 26.2 7.3 126 263-408 15-150 (354)
434 3grp_A 3-oxoacyl-(acyl carrier 24.3 90 0.0031 26.9 5.0 33 7-42 27-59 (266)
435 3op4_A 3-oxoacyl-[acyl-carrier 24.3 91 0.0031 26.4 5.0 33 7-42 9-41 (248)
436 3eme_A Rhodanese-like domain p 24.3 1.1E+02 0.0036 21.7 4.6 33 6-42 56-88 (103)
437 2qq5_A DHRS1, dehydrogenase/re 24.2 91 0.0031 26.6 5.0 32 8-42 6-37 (260)
438 4e21_A 6-phosphogluconate dehy 24.2 56 0.0019 29.9 3.6 32 6-42 22-53 (358)
439 3g79_A NDP-N-acetyl-D-galactos 24.1 83 0.0028 30.1 5.0 34 5-43 17-52 (478)
440 3l6e_A Oxidoreductase, short-c 24.1 85 0.0029 26.4 4.7 32 8-42 4-35 (235)
441 2vou_A 2,6-dihydroxypyridine h 24.1 61 0.0021 29.9 4.0 37 1-43 1-37 (397)
442 1xjc_A MOBB protein homolog; s 24.0 1.3E+02 0.0044 24.0 5.4 37 7-43 5-41 (169)
443 3sc4_A Short chain dehydrogena 24.0 78 0.0027 27.6 4.6 34 7-43 9-42 (285)
444 1ydg_A Trp repressor binding p 24.0 1E+02 0.0035 25.3 5.1 39 5-43 5-44 (211)
445 3rih_A Short chain dehydrogena 24.0 89 0.003 27.5 4.9 34 7-43 41-74 (293)
446 3gvc_A Oxidoreductase, probabl 24.0 1E+02 0.0034 26.8 5.2 33 7-42 29-61 (277)
447 1got_G GT-gamma; complex (GTP- 24.0 1.1E+02 0.0038 20.5 4.1 39 412-453 20-58 (73)
448 1rw7_A YDR533CP; alpha-beta sa 24.0 1.5E+02 0.0052 25.1 6.3 37 7-43 4-51 (243)
449 4fgs_A Probable dehydrogenase 24.0 1E+02 0.0034 26.9 5.1 34 6-42 28-61 (273)
450 2gf2_A Hibadh, 3-hydroxyisobut 24.0 50 0.0017 29.0 3.3 31 7-42 1-31 (296)
451 1ek6_A UDP-galactose 4-epimera 23.9 97 0.0033 27.7 5.3 32 7-42 3-34 (348)
452 2pju_A Propionate catabolism o 23.9 1.2E+02 0.0043 25.5 5.5 48 88-142 142-189 (225)
453 3ai3_A NADPH-sorbose reductase 23.9 1.1E+02 0.0037 26.1 5.4 32 8-42 8-39 (263)
454 2gkg_A Response regulator homo 23.8 82 0.0028 22.6 4.1 47 359-408 79-125 (127)
455 1o5i_A 3-oxoacyl-(acyl carrier 23.8 1.2E+02 0.0041 25.7 5.7 33 7-42 19-51 (249)
456 1eiw_A Hypothetical protein MT 23.8 42 0.0014 24.8 2.2 65 336-407 36-109 (111)
457 4iiu_A 3-oxoacyl-[acyl-carrier 23.8 91 0.0031 26.7 4.9 33 7-42 26-58 (267)
458 1qyd_A Pinoresinol-lariciresin 23.8 62 0.0021 28.5 3.9 34 6-43 4-37 (313)
459 1uls_A Putative 3-oxoacyl-acyl 23.8 89 0.003 26.4 4.8 32 8-42 6-37 (245)
460 3k30_A Histamine dehydrogenase 23.7 49 0.0017 33.5 3.5 34 5-43 390-423 (690)
461 2x6t_A ADP-L-glycero-D-manno-h 23.7 81 0.0028 28.4 4.8 34 6-43 46-80 (357)
462 2ahr_A Putative pyrroline carb 23.7 48 0.0017 28.4 3.1 33 5-42 2-34 (259)
463 2ph1_A Nucleotide-binding prot 23.7 1.1E+02 0.0036 26.3 5.3 37 7-43 19-56 (262)
464 4egb_A DTDP-glucose 4,6-dehydr 23.7 68 0.0023 28.8 4.2 34 4-41 22-55 (346)
465 1lld_A L-lactate dehydrogenase 23.7 44 0.0015 29.8 2.9 35 4-43 5-41 (319)
466 3t6k_A Response regulator rece 23.6 1.9E+02 0.0064 21.2 6.3 47 360-408 78-124 (136)
467 3dkr_A Esterase D; alpha beta 23.6 71 0.0024 26.3 4.1 36 7-42 22-57 (251)
468 2h7i_A Enoyl-[acyl-carrier-pro 23.6 1.2E+02 0.0043 25.9 5.8 35 6-42 6-41 (269)
469 1t1j_A Hypothetical protein; s 23.6 1.1E+02 0.0037 23.1 4.5 34 5-38 6-47 (125)
470 2jah_A Clavulanic acid dehydro 23.5 1E+02 0.0035 26.1 5.1 33 7-42 7-39 (247)
471 3sxp_A ADP-L-glycero-D-mannohe 23.5 1.3E+02 0.0044 27.1 6.2 35 5-43 9-45 (362)
472 1spx_A Short-chain reductase f 23.4 1.1E+02 0.0038 26.3 5.4 32 8-42 7-38 (278)
473 2a4k_A 3-oxoacyl-[acyl carrier 23.4 1.4E+02 0.0049 25.5 6.1 32 8-42 7-38 (263)
474 3v2h_A D-beta-hydroxybutyrate 23.3 90 0.0031 27.1 4.8 33 7-42 25-57 (281)
475 1udb_A Epimerase, UDP-galactos 23.3 1.1E+02 0.0036 27.3 5.4 32 7-42 1-32 (338)
476 4dmm_A 3-oxoacyl-[acyl-carrier 23.3 95 0.0032 26.8 4.9 33 7-42 28-60 (269)
477 2c5m_A CTP synthase; cytidine 23.2 75 0.0026 27.5 3.9 37 6-42 22-61 (294)
478 3ia7_A CALG4; glycosysltransfe 23.2 1E+02 0.0036 28.0 5.5 35 263-299 6-40 (402)
479 2pnf_A 3-oxoacyl-[acyl-carrier 23.1 1.4E+02 0.0048 24.9 6.0 33 7-42 7-39 (248)
480 3ka7_A Oxidoreductase; structu 23.1 51 0.0017 30.6 3.3 31 7-42 1-31 (425)
481 3awd_A GOX2181, putative polyo 23.1 1.3E+02 0.0043 25.5 5.7 32 8-42 14-45 (260)
482 3un1_A Probable oxidoreductase 23.1 99 0.0034 26.5 5.0 34 7-43 28-61 (260)
483 2v3c_C SRP54, signal recogniti 23.0 80 0.0027 29.8 4.6 38 6-43 99-136 (432)
484 1cyd_A Carbonyl reductase; sho 23.0 1.2E+02 0.0042 25.3 5.5 21 22-42 19-39 (244)
485 2rhc_B Actinorhodin polyketide 23.0 1.5E+02 0.0051 25.6 6.2 32 8-42 23-54 (277)
486 2pq6_A UDP-glucuronosyl/UDP-gl 23.0 1E+02 0.0034 29.5 5.4 40 4-43 292-333 (482)
487 4fn4_A Short chain dehydrogena 23.0 90 0.0031 26.9 4.6 34 6-42 6-39 (254)
488 4dyv_A Short-chain dehydrogena 22.9 97 0.0033 26.8 4.9 34 6-42 27-60 (272)
489 1g0o_A Trihydroxynaphthalene r 22.9 96 0.0033 26.9 4.9 32 8-42 30-61 (283)
490 3lte_A Response regulator; str 22.9 1.4E+02 0.0048 21.6 5.4 38 1-42 1-38 (132)
491 3uf0_A Short-chain dehydrogena 22.8 92 0.0032 27.0 4.7 33 7-42 31-63 (273)
492 3gg2_A Sugar dehydrogenase, UD 22.8 60 0.002 30.8 3.7 32 7-43 3-34 (450)
493 3ksu_A 3-oxoacyl-acyl carrier 22.8 76 0.0026 27.3 4.2 33 7-42 11-43 (262)
494 4eso_A Putative oxidoreductase 22.8 1.5E+02 0.005 25.2 6.0 33 7-42 8-40 (255)
495 3dff_A Teicoplanin pseudoaglyc 22.8 93 0.0032 27.1 4.7 38 6-43 7-44 (273)
496 2nm0_A Probable 3-oxacyl-(acyl 22.7 95 0.0033 26.5 4.8 32 8-42 22-53 (253)
497 2oze_A ORF delta'; para, walke 22.7 81 0.0028 27.6 4.4 37 7-43 35-74 (298)
498 2q8p_A Iron-regulated surface 22.7 61 0.0021 27.8 3.5 30 104-133 60-90 (260)
499 3osu_A 3-oxoacyl-[acyl-carrier 22.7 1E+02 0.0035 26.0 4.9 32 8-42 5-36 (246)
500 2kw0_A CCMH protein; oxidoredu 22.7 1.3E+02 0.0044 21.2 4.4 35 416-450 40-74 (90)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=4.4e-69 Score=522.18 Aligned_cols=436 Identities=27% Similarity=0.502 Sum_probs=355.3
Q ss_pred CCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCC--CeEEEEeCCCCCCCC-----CCCCCeeEEecCCCCCCCCCCccC
Q 012735 1 MDQRKGRRLVLFPLPLQGHISPMLQLANILHSQG--FTITIIHTSFNSPNP-----SSHPHLTFHFIQENLSASEASTDD 73 (457)
Q Consensus 1 ~~~~~~~~il~~~~~~~gH~~p~l~la~~L~~~G--h~Vt~~~~~~~~~~~-----~~~~g~~~~~i~~~~~~~~~~~~~ 73 (457)
|+..++.||+++|+|++||++|++.||+.|+++| +.|||++++++.... ....+++|+.+|++++++.....+
T Consensus 8 M~~~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~~~~~~~~ 87 (454)
T 3hbf_A 8 MNGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPKGYVSSGN 87 (454)
T ss_dssp ----CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCTTCCCCSC
T ss_pred ccCCCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCCCccccCC
Confidence 5666788999999999999999999999999999 999999986332111 112579999999999887654444
Q ss_pred HHHHHHHHHHhcchhHHHHHHHHhhccCCCCeeEEEeCCCcchHHHHHhHcCCCeEEEecchHHHHHHHHhhhhhhhcCC
Q 012735 74 LVAFVSLLNTKCLVPFRDCLAKLLADVEEEPIACLISDAMLPFTQAVADSLKLPRIVLRTGGASSFVVFAAFPLLKERGY 153 (457)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~l~iP~v~~~~~~~~~~~~~~~~~~~~~~~~ 153 (457)
....+..+...+...+++.++++.++... ++|+||+|.++.|+..+|+++|||++.++++++..+..+.+.+.......
T Consensus 88 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~ 166 (454)
T 3hbf_A 88 PREPIFLFIKAMQENFKHVIDEAVAETGK-NITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTG 166 (454)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcC
Confidence 44445555555666677777776554333 89999999999999999999999999999999998887776554333211
Q ss_pred C-CCCCCCCCccccCCCCCCCCCCCCCCC-CCChhHHHHHHhhhhccccccEEEEcCchhhhHHHHHHHHhhcCCCcccc
Q 012735 154 F-PIQDSKGQEPVVELPPLKIKDLPVINT-RDPETLYEIVNGMVDGAKVSSGIIWNTFEDLEESALATLRQQFSIPIFPI 231 (457)
Q Consensus 154 ~-p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~p~~~v 231 (457)
. +.........+|+++.++..+++.... .....+.+.+.+..+....++.+++|++++||++.++.+++.+ +++++|
T Consensus 167 ~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~-~~v~~v 245 (454)
T 3hbf_A 167 SKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKF-KLLLNV 245 (454)
T ss_dssp HHHHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS-SCEEEC
T ss_pred CCccccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcC-CCEEEE
Confidence 0 000111112367888888888885543 3344567777777778888999999999999999988888754 469999
Q ss_pred CccccCCCCCCCCCccCccccccccCCCCCCcEEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCCC
Q 012735 232 GPFHICIPASPSSLLTQDQSCIAWLDKQAPKSVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLEP 311 (457)
Q Consensus 232 Gp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~ 311 (457)
||++...+. ...+.++++.+||+.++++++|||||||....+.+.+.+++++++..++++||+++... ...
T Consensus 246 GPl~~~~~~---~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~------~~~ 316 (454)
T 3hbf_A 246 GPFNLTTPQ---RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDP------KEK 316 (454)
T ss_dssp CCHHHHSCC---SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCH------HHH
T ss_pred CCccccccc---ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcc------hhc
Confidence 999865432 22334566899999988899999999999998889999999999999999999998653 234
Q ss_pred CchhHHHhhcCCCccccccChHhhhcCCCCCCcccccChhHHHHHHhhCCcccccCccchhhHHHHHHHhhhccceecCC
Q 012735 312 LPSGFMEMVDGRGHLVKWAPQQEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVGLQLEN 391 (457)
Q Consensus 312 lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~ 391 (457)
+|+++.++.++|+++++|+||.++|+|+++++||||||+||++|++++|||||++|+++||+.||+++++.+|+|+.++.
T Consensus 317 lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~ 396 (454)
T 3hbf_A 317 LPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDN 396 (454)
T ss_dssp SCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGG
T ss_pred CCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecC
Confidence 88999999999999999999999999999888999999999999999999999999999999999999984499999987
Q ss_pred -CCCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 012735 392 -GLKREEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHIL 447 (457)
Q Consensus 392 -~~~~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (457)
.++.++|+++|+++|+++++++||+||+++++++++++.++||+.++++++++.+.
T Consensus 397 ~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 397 GVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp GSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 89999999999999998555689999999999999999999999999999999874
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=7.7e-64 Score=495.94 Aligned_cols=440 Identities=33% Similarity=0.691 Sum_probs=340.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCC---------CCCeeEEecCCCCCCCC---CCcc
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSS---------HPHLTFHFIQENLSASE---ASTD 72 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~---------~~g~~~~~i~~~~~~~~---~~~~ 72 (457)
+++||+++|++++||++|++.||++|++|||+|||++++.+.....+ ..+++|+.+++++++.. ....
T Consensus 7 ~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~~ 86 (482)
T 2pq6_A 7 RKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVSQ 86 (482)
T ss_dssp -CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------C
T ss_pred CCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcch
Confidence 46799999999999999999999999999999999998743211111 13899999998777521 1223
Q ss_pred CHHHHHHHHHHhcchhHHHHHHHHhhcc-CCCCeeEEEeCCCcchHHHHHhHcCCCeEEEecchHHHHHHHHhhhhhhhc
Q 012735 73 DLVAFVSLLNTKCLVPFRDCLAKLLADV-EEEPIACLISDAMLPFTQAVADSLKLPRIVLRTGGASSFVVFAAFPLLKER 151 (457)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~-~~~~pDlvi~D~~~~~~~~~A~~l~iP~v~~~~~~~~~~~~~~~~~~~~~~ 151 (457)
+...++..+...+...++++++++.... .. +||+||+|.++.|+..+|+++|||++.++++++.......+++.+...
T Consensus 87 ~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~-~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 165 (482)
T 2pq6_A 87 DVPTLCQSVRKNFLKPYCELLTRLNHSTNVP-PVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVER 165 (482)
T ss_dssp CHHHHHHHHTTSSHHHHHHHHHHHHTCSSSC-CCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHT
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHhhhccCC-CceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhc
Confidence 4455555555777788888877775320 12 899999999999999999999999999999998877666556666666
Q ss_pred CCCCCCCCC-----C----CccccCCCCCCCCCCCCCCCC--CChhHHHHHHhhhhccccccEEEEcCchhhhHHHHHHH
Q 012735 152 GYFPIQDSK-----G----QEPVVELPPLKIKDLPVINTR--DPETLYEIVNGMVDGAKVSSGIIWNTFEDLEESALATL 220 (457)
Q Consensus 152 ~~~p~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~ 220 (457)
++.|..... + ...+++++.++...++..... ..+.+.+.+.+..+...+++++++|++++||++.++.+
T Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~~~ 245 (482)
T 2pq6_A 166 GIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINAL 245 (482)
T ss_dssp TCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHHH
T ss_pred CCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHHHH
Confidence 777654321 1 112344444555455433211 12345555556666778889999999999999988888
Q ss_pred HhhcCCCccccCccccC--CCC------C-CCCCccCccccccccCCCCCCcEEEEEecccccCCHHHHHHHHHHHhhCC
Q 012735 221 RQQFSIPIFPIGPFHIC--IPA------S-PSSLLTQDQSCIAWLDKQAPKSVIYVSFGSIAAVSEAEFLEIAWGLANCK 291 (457)
Q Consensus 221 ~~~~~~p~~~vGp~~~~--~~~------~-~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~ 291 (457)
++.+ +++++|||++.. ... . ....++.+.++.+||+.++++++|||||||....+.+.+.+++++|+..+
T Consensus 246 ~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~ 324 (482)
T 2pq6_A 246 SSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCK 324 (482)
T ss_dssp HTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHHhcC
Confidence 8866 569999999763 210 0 00122445568999998878899999999998878888999999999999
Q ss_pred CCeEEEECCCCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCCCCCcccccChhHHHHHHhhCCcccccCccch
Q 012735 292 LPFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCFTD 371 (457)
Q Consensus 292 ~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~D 371 (457)
++++|+++.....+ . ...+|+++.++.++|+++++|+||.++|+|+++++||||||+||++|++++|||||++|++.|
T Consensus 325 ~~~l~~~~~~~~~~-~-~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~d 402 (482)
T 2pq6_A 325 KSFLWIIRPDLVIG-G-SVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFAD 402 (482)
T ss_dssp CEEEEECCGGGSTT-T-GGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTT
T ss_pred CcEEEEEcCCcccc-c-cccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccc
Confidence 99999997542111 0 123788998888999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHH-hhhccceecCCCCCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 012735 372 QKVNARYVS-DVWKVGLQLENGLKREEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILSL 449 (457)
Q Consensus 372 Q~~na~~v~-~~lG~g~~l~~~~~~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (457)
|+.||++++ + +|+|+.++..+++++|+++|+++|+|+++++||+||+++++++++++.++||+.++++++++.++++
T Consensus 403 Q~~na~~~~~~-~G~g~~l~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~~~ 480 (482)
T 2pq6_A 403 QPTDCRFICNE-WEIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVLLK 480 (482)
T ss_dssp HHHHHHHHHHT-SCCEEECCSSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHH-hCEEEEECCCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhc
Confidence 999999997 7 6999999767899999999999999843347999999999999999999999999999999998654
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=3e-61 Score=475.56 Aligned_cols=442 Identities=28% Similarity=0.455 Sum_probs=324.6
Q ss_pred CCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHC-CCeEEEEeCCCCC--CCCC----C-CCCeeEEecCCCCCCCCCCcc
Q 012735 1 MDQRKGRRLVLFPLPLQGHISPMLQLANILHSQ-GFTITIIHTSFNS--PNPS----S-HPHLTFHFIQENLSASEASTD 72 (457)
Q Consensus 1 ~~~~~~~~il~~~~~~~gH~~p~l~la~~L~~~-Gh~Vt~~~~~~~~--~~~~----~-~~g~~~~~i~~~~~~~~~~~~ 72 (457)
|+.++++||+++|++++||++|+++||++|++| ||+|||+++..+. .... . ..+++|+.++.+..+......
T Consensus 1 M~~~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~ 80 (480)
T 2vch_A 1 MEESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLTDLSSST 80 (480)
T ss_dssp -----CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCTTSCTTC
T ss_pred CCCCCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCCCCCCch
Confidence 777778999999999999999999999999998 9999999987531 1111 0 258999999865322211122
Q ss_pred CHHHHHHHHHHhcchhHHHHHHHHhhccCCCCe-eEEEeCCCcchHHHHHhHcCCCeEEEecchHHHHHHHHhhhhhhhc
Q 012735 73 DLVAFVSLLNTKCLVPFRDCLAKLLADVEEEPI-ACLISDAMLPFTQAVADSLKLPRIVLRTGGASSFVVFAAFPLLKER 151 (457)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~p-Dlvi~D~~~~~~~~~A~~l~iP~v~~~~~~~~~~~~~~~~~~~~~~ 151 (457)
+....+......+...++++++++... . ++ |+||+|.++.|+..+|+++|||++.++++++.......+++.....
T Consensus 81 ~~~~~~~~~~~~~~~~l~~ll~~~~~~--~-~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 157 (480)
T 2vch_A 81 RIESRISLTVTRSNPELRKVFDSFVEG--G-RLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDET 157 (480)
T ss_dssp CHHHHHHHHHHTTHHHHHHHHHHHHHT--T-CCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhhHHHHHHHHHhccC--C-CCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhc
Confidence 333333344455556667777665421 1 78 9999999988999999999999999999998876665544433222
Q ss_pred CCCCCCCCCCCccccCCCCCCCCCCCCCCCCCChhHHHHHHhhhhccccccEEEEcCchhhhHHHHHHHHhhc--CCCcc
Q 012735 152 GYFPIQDSKGQEPVVELPPLKIKDLPVINTRDPETLYEIVNGMVDGAKVSSGIIWNTFEDLEESALATLRQQF--SIPIF 229 (457)
Q Consensus 152 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~--~~p~~ 229 (457)
...+..+......+|+++.+...+++...........+.+.+....++.+..+++|++.++|...+..+.+.. .++++
T Consensus 158 ~~~~~~~~~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~v~ 237 (480)
T 2vch_A 158 VSCEFRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVY 237 (480)
T ss_dssp CCSCGGGCSSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCEE
T ss_pred CCCcccccCCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCcEE
Confidence 1111110000112344444444444432212222344444444555667788889999999998777666411 13599
Q ss_pred ccCccccCCCCCCCCCccCccccccccCCCCCCcEEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCCC----
Q 012735 230 PIGPFHICIPASPSSLLTQDQSCIAWLDKQAPKSVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTRG---- 305 (457)
Q Consensus 230 ~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~---- 305 (457)
+|||++..... ....+.++++.+||++++++++|||||||....+.+++.+++++++..++++||+++.....+
T Consensus 238 ~vGpl~~~~~~--~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~ 315 (480)
T 2vch_A 238 PVGPLVNIGKQ--EAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSY 315 (480)
T ss_dssp ECCCCCCCSCS--CC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTT
T ss_pred EEecccccccc--ccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCccccccccc
Confidence 99999865321 000223456899999987889999999999988889999999999999999999998643110
Q ss_pred -----CCCC-CCCchhHHHhhcCCCcccc-ccChHhhhcCCCCCCcccccChhHHHHHHhhCCcccccCccchhhHHHHH
Q 012735 306 -----SDCL-EPLPSGFMEMVDGRGHLVK-WAPQQEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCFTDQKVNARY 378 (457)
Q Consensus 306 -----~~~~-~~lp~~~~~~~~~~~~~~~-~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~ 378 (457)
.... ..+|+|+.++..++++++. |+||.+||+|++|++||||||+||++||+++|||||++|++.||+.||++
T Consensus 316 ~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~ 395 (480)
T 2vch_A 316 FDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVL 395 (480)
T ss_dssp TCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHH
T ss_pred cccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHHHHH
Confidence 0001 2488999888888877775 99999999999999999999999999999999999999999999999999
Q ss_pred H-HhhhccceecCC----CCCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 012735 379 V-SDVWKVGLQLEN----GLKREEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILS 448 (457)
Q Consensus 379 v-~~~lG~g~~l~~----~~~~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (457)
+ ++ +|+|+.++. .+++++|+++|+++|+++++++||+||+++++++++++.++|++.++++++++.+++
T Consensus 396 l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 396 LSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp HHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHH
T ss_pred HHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 7 68 699999975 489999999999999843348999999999999999999999999999999999876
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=1.1e-61 Score=475.61 Aligned_cols=438 Identities=26% Similarity=0.494 Sum_probs=327.6
Q ss_pred CCCC-CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCe--EEEEeCCCCC----C-CCC-CCCCeeEEecCCCCCCCCCCc
Q 012735 1 MDQR-KGRRLVLFPLPLQGHISPMLQLANILHSQGFT--ITIIHTSFNS----P-NPS-SHPHLTFHFIQENLSASEAST 71 (457)
Q Consensus 1 ~~~~-~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~--Vt~~~~~~~~----~-~~~-~~~g~~~~~i~~~~~~~~~~~ 71 (457)
|++. +++||+++|++++||++|+++||++|++|||+ |||++++.+. . ... ...+++++.+++++++.....
T Consensus 1 m~~~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~~~~~~ 80 (456)
T 2c1x_A 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPEGYVFA 80 (456)
T ss_dssp ------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCTTCCCC
T ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCCccccc
Confidence 5553 36899999999999999999999999999766 4777774211 0 011 025899999998887654222
Q ss_pred cCHHHHHHHHHHhcchhHHHHHHHHhhccCCCCeeEEEeCCCcchHHHHHhHcCCCeEEEecchHHHHHHHHhhhhhhhc
Q 012735 72 DDLVAFVSLLNTKCLVPFRDCLAKLLADVEEEPIACLISDAMLPFTQAVADSLKLPRIVLRTGGASSFVVFAAFPLLKER 151 (457)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~l~iP~v~~~~~~~~~~~~~~~~~~~~~~ 151 (457)
......+..+...+...+++.++++.+.... +||+||+|.++.|+..+|+++|||+|.++++++.......+.+.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~-~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 159 (456)
T 2c1x_A 81 GRPQEDIELFTRAAPESFRQGMVMAVAETGR-PVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREK 159 (456)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHHHHHTC-CCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHH
T ss_pred CChHHHHHHHHHHhHHHHHHHHHHHHhccCC-CceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhc
Confidence 2233334444444445556666655533223 899999999999999999999999999999987766554433322111
Q ss_pred -CCCCC-C-CCCCCccccCCCCCCCCCCCCCCC--CCChhHHHHHHhhhhccccccEEEEcCchhhhHHHHHHHHhhcCC
Q 012735 152 -GYFPI-Q-DSKGQEPVVELPPLKIKDLPVINT--RDPETLYEIVNGMVDGAKVSSGIIWNTFEDLEESALATLRQQFSI 226 (457)
Q Consensus 152 -~~~p~-~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~ 226 (457)
.+.+. . .......+|+++.++..+++.... .....+.+.+.+..+....++.+++|+++++|++.+..+++.+ +
T Consensus 160 ~~~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~-~ 238 (456)
T 2c1x_A 160 IGVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKL-K 238 (456)
T ss_dssp HCSSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHS-S
T ss_pred cCCcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcC-C
Confidence 11110 0 011112345555555555553221 1122344555555556678899999999999999888888765 4
Q ss_pred CccccCccccCCCCCCCCCccCccccccccCCCCCCcEEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCCCC
Q 012735 227 PIFPIGPFHICIPASPSSLLTQDQSCIAWLDKQAPKSVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTRGS 306 (457)
Q Consensus 227 p~~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~ 306 (457)
++++|||+...... ..++.+.++.+|++..+++++|||||||....+.+.+.+++++++..+.+++|+++...
T Consensus 239 ~~~~vGpl~~~~~~---~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~---- 311 (456)
T 2c1x_A 239 TYLNIGPFNLITPP---PVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKA---- 311 (456)
T ss_dssp CEEECCCHHHHC------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGG----
T ss_pred CEEEecCcccCccc---ccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcc----
Confidence 69999999865432 12444456889999887889999999999987888999999999999999999997643
Q ss_pred CCCCCCchhHHHhhcCCCccccccChHhhhcCCCCCCcccccChhHHHHHHhhCCcccccCccchhhHHHHHHHhhhccc
Q 012735 307 DCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVG 386 (457)
Q Consensus 307 ~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g 386 (457)
...+|+++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++++.+|+|
T Consensus 312 --~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g 389 (456)
T 2c1x_A 312 --RVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIG 389 (456)
T ss_dssp --GGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCE
T ss_pred --hhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeE
Confidence 234788888888899999999999999999999999999999999999999999999999999999999999933999
Q ss_pred eecCC-CCCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 012735 387 LQLEN-GLKREEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILSL 449 (457)
Q Consensus 387 ~~l~~-~~~~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (457)
+.++. .++.++|+++|+++|+|+++++||+||+++++.+++++.++||+.++++++++.+.+.
T Consensus 390 ~~l~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~~ 453 (456)
T 2c1x_A 390 VRIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKP 453 (456)
T ss_dssp EECGGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTSC
T ss_pred EEecCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHhc
Confidence 99987 7999999999999999844458999999999999999999999999999999998653
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=4.8e-58 Score=451.10 Aligned_cols=426 Identities=26% Similarity=0.450 Sum_probs=319.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCCCCCC---------CCCCCCeeEEecCCCCCCCCCCccC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQ--GFTITIIHTSFNSPN---------PSSHPHLTFHFIQENLSASEASTDD 73 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~~~~~~~---------~~~~~g~~~~~i~~~~~~~~~~~~~ 73 (457)
+++||+++|+|++||++|+++||++|+++ ||+|||++++.+... .....+++|+.+|++..+..+...+
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~~~ 87 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPPQELLKS 87 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCCGGGGGS
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCCcccccCC
Confidence 36799999999999999999999999999 999999999754211 0112589999999763222111112
Q ss_pred HHHHHHHHHHhcchhHHHHHHHHhhccCCCCeeEEEeCCCcchHHHHHhHcCCCeEEEecchHHHHHHHHhhhhhhhcCC
Q 012735 74 LVAFVSLLNTKCLVPFRDCLAKLLADVEEEPIACLISDAMLPFTQAVADSLKLPRIVLRTGGASSFVVFAAFPLLKERGY 153 (457)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~l~iP~v~~~~~~~~~~~~~~~~~~~~~~~~ 153 (457)
....+......+...++++++++ .. . +||+||+|.++.|+..+|+++|||++.++++++.......+++.....
T Consensus 88 ~~~~~~~~~~~~~~~~~~ll~~~-~~--~-~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~-- 161 (463)
T 2acv_A 88 PEFYILTFLESLIPHVKATIKTI-LS--N-KVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE-- 161 (463)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHH-CC--T-TEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT--
T ss_pred ccHHHHHHHHhhhHHHHHHHHhc-cC--C-CCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhccc--
Confidence 11113333455555666666665 11 2 899999999989999999999999999999988876665554432100
Q ss_pred CCCCCCCC---CccccCC-CCCCCCCCCCCCCCCChhHHHHHHhhhhccccccEEEEcCchhhhHHHHHHHHhhc--CCC
Q 012735 154 FPIQDSKG---QEPVVEL-PPLKIKDLPVINTRDPETLYEIVNGMVDGAKVSSGIIWNTFEDLEESALATLRQQF--SIP 227 (457)
Q Consensus 154 ~p~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~--~~p 227 (457)
.+...... ...+|++ +.+...+++...... ....+.+.+..+.+..++.+++|+++++|+.....+.+.. .++
T Consensus 162 ~~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~~~ 240 (463)
T 2acv_A 162 EVFDDSDRDHQLLNIPGISNQVPSNVLPDACFNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPP 240 (463)
T ss_dssp CCCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSCC
T ss_pred CCCCCccccCceeECCCCCCCCChHHCchhhcCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccccCCc
Confidence 01111110 1223444 443433333111111 2244444444455677788899999999998877766644 345
Q ss_pred ccccCccccCCC-CCCCCCccCccccccccCCCCCCcEEEEEecccc-cCCHHHHHHHHHHHhhCCCCeEEEECCCCCCC
Q 012735 228 IFPIGPFHICIP-ASPSSLLTQDQSCIAWLDKQAPKSVIYVSFGSIA-AVSEAEFLEIAWGLANCKLPFLWVVRPGLTRG 305 (457)
Q Consensus 228 ~~~vGp~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~ 305 (457)
+++|||+..... ......++.+.++.+|++.++++++|||||||.. ..+.+.+.+++++|+..++++||+++.+.
T Consensus 241 v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~--- 317 (463)
T 2acv_A 241 IYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEK--- 317 (463)
T ss_dssp EEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCG---
T ss_pred EEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCCc---
Confidence 999999986532 1000001233568999999888899999999999 77888899999999999999999997530
Q ss_pred CCCCCCCchhHHHhh--cCCCccccccChHhhhcCCCCCCcccccChhHHHHHHhhCCcccccCccchhhHHHHHH-Hhh
Q 012735 306 SDCLEPLPSGFMEMV--DGRGHLVKWAPQQEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCFTDQKVNARYV-SDV 382 (457)
Q Consensus 306 ~~~~~~lp~~~~~~~--~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v-~~~ 382 (457)
..+|+++.++. ++|+++++|+||.++|+|+++++||||||+||++|++++|||||++|++.||+.||+++ ++
T Consensus 318 ----~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~- 392 (463)
T 2acv_A 318 ----KVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKE- 392 (463)
T ss_dssp ----GGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHT-
T ss_pred ----ccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHH-
Confidence 13778888777 88999999999999999999999999999999999999999999999999999999995 78
Q ss_pred hccceec-C----C--CCCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 012735 383 WKVGLQL-E----N--GLKREEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHIL 447 (457)
Q Consensus 383 lG~g~~l-~----~--~~~~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (457)
+|+|+.+ + . .++.++|+++|+++|++. ++||+||+++++++++++.++||+.++++++++.+.
T Consensus 393 ~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~--~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 393 WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKD--SIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTT--CTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred cCeEEEEecccCCCCccccHHHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 6999999 3 2 479999999999999721 689999999999999999999999999999999874
No 6
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=8.2e-46 Score=360.18 Aligned_cols=358 Identities=19% Similarity=0.227 Sum_probs=231.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCCC----------C----C
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSSHPHLTFHFIQENLSASE----------A----S 70 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~----------~----~ 70 (457)
+.|||||+++|+.||++|+++||++|++|||+|||++++....... .|+.+..+.++..... . .
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE--AGLCAVDVSPGVNYAKLFVPDDTDVTDPMHSE 98 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT--TTCEEEESSTTCCSHHHHSCCC----------
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh--cCCeeEecCCchhHhhhccccccccccccchh
Confidence 4699999999999999999999999999999999999863332222 5788888764432111 0 0
Q ss_pred ccCHHHHHHHHHHhcchhHHHHHHHHhhccCCCCeeEEEeCCCcchHHHHHhHcCCCeEEEecchHHHHHHHHhhhhhhh
Q 012735 71 TDDLVAFVSLLNTKCLVPFRDCLAKLLADVEEEPIACLISDAMLPFTQAVADSLKLPRIVLRTGGASSFVVFAAFPLLKE 150 (457)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~l~iP~v~~~~~~~~~~~~~~~~~~~~~ 150 (457)
..........+.......+.+++ ++.+.. +||+||+|.+..++..+|+.+|||++.+...+.........
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~---~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~------ 168 (400)
T 4amg_A 99 GLGEGFFAEMFARVSAVAVDGAL-RTARSW---RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGA------ 168 (400)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHH-HHHHHH---CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHH------
T ss_pred hhhHHHHHHHHHHHHHHHHHHHH-HHHHhc---CCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhh------
Confidence 00111111112222222222222 233333 99999999999999999999999999876543221100000
Q ss_pred cCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCChhHHHHHHhhhhc-cccccEEEEcCchhhhHHHHHHHHhhcCCC-c
Q 012735 151 RGYFPIQDSKGQEPVVELPPLKIKDLPVINTRDPETLYEIVNGMVDG-AKVSSGIIWNTFEDLEESALATLRQQFSIP-I 228 (457)
Q Consensus 151 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~le~~~~~~~~~~~~~p-~ 228 (457)
...+.+.+.+.+..-. ............+..... .+.....+ .
T Consensus 169 -------------------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 213 (400)
T 4amg_A 169 -------------------------------LIRRAMSKDYERHGVTGEPTGSVRLTTTPPSVEAL----LPEDRRSPGA 213 (400)
T ss_dssp -------------------------------HHHHHTHHHHHHTTCCCCCSCEEEEECCCHHHHHT----SCGGGCCTTC
T ss_pred -------------------------------HHHHHHHHHHHHhCCCcccccchhhcccCchhhcc----CcccccCCcc
Confidence 0000001111111111 111222222222222111 00000111 1
Q ss_pred cccCccccCCCCCCCCCccCccccccccCCCCCCcEEEEEecccccCC--HHHHHHHHHHHhhCCCCeEEEECCCCCCCC
Q 012735 229 FPIGPFHICIPASPSSLLTQDQSCIAWLDKQAPKSVIYVSFGSIAAVS--EAEFLEIAWGLANCKLPFLWVVRPGLTRGS 306 (457)
Q Consensus 229 ~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~--~~~~~~~~~al~~~~~~~i~~~~~~~~~~~ 306 (457)
....+.. ......+.+|++..+++++|||||||..... .+.+..++++++..+.+++|...+.....
T Consensus 214 ~~~~~~~----------~~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~- 282 (400)
T 4amg_A 214 WPMRYVP----------YNGGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLAL- 282 (400)
T ss_dssp EECCCCC----------CCCCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCCC-
T ss_pred cCccccc----------ccccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCccccc-
Confidence 1111111 1112234568888888899999999987632 35678899999999999999987654222
Q ss_pred CCCCCCchhHHHhhcCCCccccccChHhhhcCCCCCCcccccChhHHHHHHhhCCcccccCccchhhHHHHHHHhhhccc
Q 012735 307 DCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVG 386 (457)
Q Consensus 307 ~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g 386 (457)
...+|+|+ ++.+|+||.++|+|+++ ||||||+||++||+++|||+|++|++.||+.||+++++ +|+|
T Consensus 283 --~~~~~~~v--------~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~-~G~g 349 (400)
T 4amg_A 283 --LGELPANV--------RVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTG-LGIG 349 (400)
T ss_dssp --CCCCCTTE--------EEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHH-HTSE
T ss_pred --cccCCCCE--------EEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHH-CCCE
Confidence 33455555 89999999999988888 99999999999999999999999999999999999999 5999
Q ss_pred eecCC-CCCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 012735 387 LQLEN-GLKREEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVT 444 (457)
Q Consensus 387 ~~l~~-~~~~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~ 444 (457)
+.++. ..+++ +|+++|+| ++||+||++++++++ ...+..++++.|++
T Consensus 350 ~~l~~~~~~~~----al~~lL~d---~~~r~~a~~l~~~~~----~~~~~~~~a~~le~ 397 (400)
T 4amg_A 350 FDAEAGSLGAE----QCRRLLDD---AGLREAALRVRQEMS----EMPPPAETAAXLVA 397 (400)
T ss_dssp EECCTTTCSHH----HHHHHHHC---HHHHHHHHHHHHHHH----TSCCHHHHHHHHHH
T ss_pred EEcCCCCchHH----HHHHHHcC---HHHHHHHHHHHHHHH----cCCCHHHHHHHHHH
Confidence 99987 66654 67788999 999999999999998 55566666666654
No 7
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=2.9e-45 Score=358.85 Aligned_cols=397 Identities=13% Similarity=0.167 Sum_probs=267.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCCCCC----ccCHHHHHHH
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSSHPHLTFHFIQENLSASEAS----TDDLVAFVSL 80 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~----~~~~~~~~~~ 80 (457)
+++||+|++++++||++|+++||++|+++||+|+|++++........ .|+++++++.+++..... ..+....+..
T Consensus 11 ~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (424)
T 2iya_A 11 TPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKA-AGATPVVYDSILPKESNPEESWPEDQESAMGL 89 (424)
T ss_dssp CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-HTCEEEECCCCSCCTTCTTCCCCSSHHHHHHH
T ss_pred ccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHh-CCCEEEecCccccccccchhhcchhHHHHHHH
Confidence 35799999999999999999999999999999999998743222221 478999998765533211 2233333333
Q ss_pred HHHhcchhHHHHHHHHhhccCCCCeeEEEeCCCcchHHHHHhHcCCCeEEEecchHHHHHHHHhhhhhhhcCCCCCCCCC
Q 012735 81 LNTKCLVPFRDCLAKLLADVEEEPIACLISDAMLPFTQAVADSLKLPRIVLRTGGASSFVVFAAFPLLKERGYFPIQDSK 160 (457)
Q Consensus 81 ~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~l~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 160 (457)
+...+..... .+.++++.. +||+||+|.+..|+..+|+.+|||++.+++.+..........+. ........ .
T Consensus 90 ~~~~~~~~~~-~l~~~l~~~---~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~-~~~~~~~~---~ 161 (424)
T 2iya_A 90 FLDEAVRVLP-QLEDAYADD---RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPA-VQDPTADR---G 161 (424)
T ss_dssp HHHHHHHHHH-HHHHHTTTS---CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGG-GSCCCC------
T ss_pred HHHHHHHHHH-HHHHHHhcc---CCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccccccccc-cccccccc---c
Confidence 3333322222 233444333 99999999988899999999999999988765421111000000 00000000 0
Q ss_pred CCccccCCCCCCCCCCCCCCCCCChhHHHHHHhhhh----------ccccccEEEEcCchhhhHHHHHHHHhhcCCCccc
Q 012735 161 GQEPVVELPPLKIKDLPVINTRDPETLYEIVNGMVD----------GAKVSSGIIWNTFEDLEESALATLRQQFSIPIFP 230 (457)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~le~~~~~~~~~~~~~p~~~ 230 (457)
.....+...... ....... .....+.+.+..... .....+.++.++.++++++ ...++.++++
T Consensus 162 ~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~-----~~~~~~~~~~ 234 (424)
T 2iya_A 162 EEAAAPAGTGDA-EEGAEAE-DGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK-----GDTVGDNYTF 234 (424)
T ss_dssp -------------------H-HHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT-----GGGCCTTEEE
T ss_pred cccccccccccc-hhhhccc-hhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC-----ccCCCCCEEE
Confidence 000000000000 0000000 000001111111111 1114567889999988765 2334556999
Q ss_pred cCccccCCCCCCCCCccCccccccccCCCCCCcEEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCC
Q 012735 231 IGPFHICIPASPSSLLTQDQSCIAWLDKQAPKSVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLE 310 (457)
Q Consensus 231 vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~ 310 (457)
|||+..... +..+|++..+++++||+++||......+.+..++++++..+.+++|.++....
T Consensus 235 vGp~~~~~~-----------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~------- 296 (424)
T 2iya_A 235 VGPTYGDRS-----------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFVD------- 296 (424)
T ss_dssp CCCCCCCCG-----------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTSC-------
T ss_pred eCCCCCCcc-----------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcCC-------
Confidence 999764211 02357765556789999999998666788899999999888889888875421
Q ss_pred CCchhHHHhhcCCCccccccChHhhhcCCCCCCcccccChhHHHHHHhhCCcccccCccchhhHHHHHHHhhhccceecC
Q 012735 311 PLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVGLQLE 390 (457)
Q Consensus 311 ~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~ 390 (457)
.+.+ +..++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||+++++ +|+|+.++
T Consensus 297 --~~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~ 370 (424)
T 2iya_A 297 --PADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVE-LGLGRHIP 370 (424)
T ss_dssp --GGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-TTSEEECC
T ss_pred --hHHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHH-CCCEEEcC
Confidence 0111 112455689999999999999988 99999999999999999999999999999999999999 59999998
Q ss_pred C-CCCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 012735 391 N-GLKREEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILS 448 (457)
Q Consensus 391 ~-~~~~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (457)
. .+++++|.++|+++++| ++|++++++++++++ ..++.+++++.+++.+++
T Consensus 371 ~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~ 422 (424)
T 2iya_A 371 RDQVTAEKLREAVLAVASD---PGVAERLAAVRQEIR----EAGGARAAADILEGILAE 422 (424)
T ss_dssp GGGCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hcCcHHHHHHHHHHHHhc
Confidence 7 78999999999999999 899999999999998 567788888888777653
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=6.9e-43 Score=340.78 Aligned_cols=378 Identities=13% Similarity=0.095 Sum_probs=251.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCCCCC-ccCHHHHHHHHHHhc
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSSHPHLTFHFIQENLSASEAS-TDDLVAFVSLLNTKC 85 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~ 85 (457)
|||+|++.++.||++|+++||++|+++||+|+|++++........ .|++++.++......... .......+ ...+
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~-~g~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~ 76 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE-VGVPHVPVGPSARAPIQRAKPLTAEDV---RRFT 76 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-TTCCEEECCC-------CCSCCCHHHH---HHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH-cCCeeeeCCCCHHHHhhcccccchHHH---HHHH
Confidence 689999999999999999999999999999999998642221111 589999998653211110 11111111 1222
Q ss_pred chhHHHHHHHHhhccCCCCeeEEEeCC-Ccch--HHHHHhHcCCCeEEEecchHHHHHHHHhhhhhhhcCCCCCCCCCCC
Q 012735 86 LVPFRDCLAKLLADVEEEPIACLISDA-MLPF--TQAVADSLKLPRIVLRTGGASSFVVFAAFPLLKERGYFPIQDSKGQ 162 (457)
Q Consensus 86 ~~~~~~~l~~l~~~~~~~~pDlvi~D~-~~~~--~~~~A~~l~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 162 (457)
...+.+.++++.+. .. +||+||+|. +..| +..+|+++|||++.+.+.+... ...++|......
T Consensus 77 ~~~~~~~~~~l~~~-~~-~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~-----------~~~~~p~~~~~~- 142 (415)
T 1iir_A 77 TEAIATQFDEIPAA-AE-GCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYV-----------PSPYYPPPPLGE- 142 (415)
T ss_dssp HHHHHHHHHHHHHH-TT-TCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGS-----------CCSSSCCCC----
T ss_pred HHHHHHHHHHHHHH-hc-CCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcC-----------CCcccCCccCCc-
Confidence 22233445555431 11 999999997 5678 8999999999999988775321 111222111000
Q ss_pred ccccCCCCCCCCCCCCCCCCCCh-h----HHHHHHhhhhc------------cccccEEEEcCchhhhH-HHHHHHHhhc
Q 012735 163 EPVVELPPLKIKDLPVINTRDPE-T----LYEIVNGMVDG------------AKVSSGIIWNTFEDLEE-SALATLRQQF 224 (457)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~------------~~~~~~~~~~~~~~le~-~~~~~~~~~~ 224 (457)
.+++ . ...+. ......+ . +...+....+. .... ..+.++++.+++ + +..+
T Consensus 143 -~~~~--~-~~~n~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~-----~~~~ 210 (415)
T 1iir_A 143 -PSTQ--D-TIDIP--AQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ-----PTDL 210 (415)
T ss_dssp ----------CHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC-----CCSS
T ss_pred -cccc--h-HHHHH--HHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC-----cccC
Confidence 0000 0 00000 0000000 0 00001111110 0112 568888888875 3 1111
Q ss_pred CCCccccCccccCCCCCCCCCccCccccccccCCCCCCcEEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCC
Q 012735 225 SIPIFPIGPFHICIPASPSSLLTQDQSCIAWLDKQAPKSVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTR 304 (457)
Q Consensus 225 ~~p~~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 304 (457)
+++++||+..... .+.+.++.+|++.. +++|||++||.. ...+..+.++++++..+.+++|+++.....
T Consensus 211 --~~~~vG~~~~~~~------~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g~~~~~ 279 (415)
T 1iir_A 211 --DAVQTGAWILPDE------RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRGWADLV 279 (415)
T ss_dssp --CCEECCCCCCCCC------CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTCTTCC
T ss_pred --CeEeeCCCccCcc------cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 5889999886532 12334578899764 478999999997 578888899999999999999988754310
Q ss_pred CCCCCCCCchhHHHhhcCCCccccccChHhhhcCCCCCCcccccChhHHHHHHhhCCcccccCccchhhHHHHHHHhhhc
Q 012735 305 GSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVWK 384 (457)
Q Consensus 305 ~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG 384 (457)
...++++ +++.+|+||.++|+++++ ||||||+||+.||+++|||+|++|...||..||+++++ +|
T Consensus 280 ----~~~~~~~--------v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g 344 (415)
T 1iir_A 280 ----LPDDGAD--------CFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAE-LG 344 (415)
T ss_dssp ----CSSCGGG--------EEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HT
T ss_pred ----ccCCCCC--------EEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHH-CC
Confidence 1223444 488999999999966666 99999999999999999999999999999999999999 59
Q ss_pred cceecCC-CCCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 012735 385 VGLQLEN-GLKREEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILS 448 (457)
Q Consensus 385 ~g~~l~~-~~~~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (457)
+|+.++. .++++.|.++|+++ +| ++|++++++++++++ ..++.+++++.+++.++.
T Consensus 345 ~g~~~~~~~~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 345 VGVAHDGPIPTFDSLSAALATA-LT---PETHARATAVAGTIR----TDGAAVAARLLLDAVSRE 401 (415)
T ss_dssp SEEECSSSSCCHHHHHHHHHHH-TS---HHHHHHHHHHHHHSC----SCHHHHHHHHHHHHHHTC
T ss_pred CcccCCcCCCCHHHHHHHHHHH-cC---HHHHHHHHHHHHHHh----hcChHHHHHHHHHHHHhc
Confidence 9999987 78999999999999 98 899999999999987 566677777777666543
No 9
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=2.5e-41 Score=330.22 Aligned_cols=379 Identities=16% Similarity=0.158 Sum_probs=259.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCCCC----CccCHHHHHH
Q 012735 4 RKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSSHPHLTFHFIQENLSASEA----STDDLVAFVS 79 (457)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~----~~~~~~~~~~ 79 (457)
.+++||+|++.++.||++|+++||++|+++||+|+|++++........ .|+.+..++..++.... ...+....+.
T Consensus 18 ~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (415)
T 3rsc_A 18 RHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA-AGATVVPYQSEIIDADAAEVFGSDDLGVRPH 96 (415)
T ss_dssp -CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH-TTCEEEECCCSTTTCCHHHHHHSSSSCHHHH
T ss_pred ccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh-cCCEEEeccccccccccchhhccccHHHHHH
Confidence 457899999999999999999999999999999999997532222222 58999998865443210 0001111112
Q ss_pred H-HHHhcchhHHHHHHHHhhccCCCCeeEEEeC-CCcchHHHHHhHcCCCeEEEecchHHHHHHHHhhhhhhhcCCCCCC
Q 012735 80 L-LNTKCLVPFRDCLAKLLADVEEEPIACLISD-AMLPFTQAVADSLKLPRIVLRTGGASSFVVFAAFPLLKERGYFPIQ 157 (457)
Q Consensus 80 ~-~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D-~~~~~~~~~A~~l~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 157 (457)
. +.......+.+ +.++++.. +||+||+| ....++..+|+.+|||++.+.+.......... .+....... .
T Consensus 97 ~~~~~~~~~~~~~-l~~~l~~~---~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~~~~~~-~-- 168 (415)
T 3rsc_A 97 LMYLRENVSVLRA-TAEALDGD---VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSF-SQDMVTLAG-T-- 168 (415)
T ss_dssp HHHHHHHHHHHHH-HHHHHSSS---CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCCH-HHHHHHHHT-C--
T ss_pred HHHHHHHHHHHHH-HHHHHhcc---CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCcccc-ccccccccc-c--
Confidence 1 22222222222 33344433 99999999 77788999999999999998754321000000 000000000 0
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCCCChhHHHHHHhhhhc----------cc-cccEEEEcCchhhhHHHHHHHHhhcCC
Q 012735 158 DSKGQEPVVELPPLKIKDLPVINTRDPETLYEIVNGMVDG----------AK-VSSGIIWNTFEDLEESALATLRQQFSI 226 (457)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~~~~~~~~~le~~~~~~~~~~~~~ 226 (457)
..+ .......+.+...... .. ..+..+....+.++++ +..++.
T Consensus 169 -----------------~~p----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~ 222 (415)
T 3rsc_A 169 -----------------IDP----LDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA-----GDTFDD 222 (415)
T ss_dssp -----------------CCG----GGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT-----GGGCCT
T ss_pred -----------------CCh----hhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC-----cccCCC
Confidence 000 0001111111111110 11 1155566666555543 344455
Q ss_pred CccccCccccCCCCCCCCCccCccccccccCCCCCCcEEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCCCC
Q 012735 227 PIFPIGPFHICIPASPSSLLTQDQSCIAWLDKQAPKSVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTRGS 306 (457)
Q Consensus 227 p~~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~ 306 (457)
++.++||....... ..+|....+++++||+++||......+.+..++++++..+.+++|.++.+...
T Consensus 223 ~~~~vGp~~~~~~~-----------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~-- 289 (415)
T 3rsc_A 223 RFVFVGPCFDDRRF-----------LGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQVDP-- 289 (415)
T ss_dssp TEEECCCCCCCCGG-----------GCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTSCG--
T ss_pred ceEEeCCCCCCccc-----------CcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCCCh--
Confidence 58899987644221 23455545567899999999987677888999999998888888888754210
Q ss_pred CCCCCCchhHHHhhcCCCccccccChHhhhcCCCCCCcccccChhHHHHHHhhCCcccccCccchhhHHHHHHHhhhccc
Q 012735 307 DCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVG 386 (457)
Q Consensus 307 ~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g 386 (457)
+.+..+ ++|+++.+|+|+.++|+++++ ||||||+||+.||+++|+|+|++|...||+.||+++++ .|+|
T Consensus 290 ~~l~~~--------~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~-~g~g 358 (415)
T 3rsc_A 290 AALGDL--------PPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQ-LGLG 358 (415)
T ss_dssp GGGCCC--------CTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHH-HTCE
T ss_pred HHhcCC--------CCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHH-cCCE
Confidence 001223 345589999999999999888 99999999999999999999999999999999999999 5999
Q ss_pred eecCC-CCCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 012735 387 LQLEN-GLKREEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILS 448 (457)
Q Consensus 387 ~~l~~-~~~~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (457)
+.+.. .++++.|.++|+++++| ++++++++++++++. +.++.+++++.+++.+++
T Consensus 359 ~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 359 AVLPGEKADGDTLLAAVGAVAAD---PALLARVEAMRGHVR----RAGGAARAADAVEAYLAR 414 (415)
T ss_dssp EECCGGGCCHHHHHHHHHHHHTC---HHHHHHHHHHHHHHH----HSCHHHHHHHHHHHHHHH
T ss_pred EEcccCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHhhc
Confidence 99987 78999999999999999 899999999999998 678888888888887754
No 10
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.1e-41 Score=332.47 Aligned_cols=375 Identities=11% Similarity=0.024 Sum_probs=251.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCCCC--CccCHHHHHHHHHHh
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSSHPHLTFHFIQENLSASEA--STDDLVAFVSLLNTK 84 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~ 84 (457)
|||+|++.++.||++|+++||++|+++||+|+|++++........ .|++++.++........ ........+..+
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 76 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAE-VGVPHVPVGLPQHMMLQEGMPPPPPEEEQRL--- 76 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-HTCCEEECSCCGGGCCCTTSCCCCHHHHHHH---
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH-cCCeeeecCCCHHHHHhhccccchhHHHHHH---
Confidence 689999999999999999999999999999999998632211111 58899998864321111 011111111111
Q ss_pred cchhHHHHHHHHhhccCCCCeeEEEeCC-Ccch--HHHHHhHcCCCeEEEecchHHHHHHHHhhhhhhhcCCCCCCCCCC
Q 012735 85 CLVPFRDCLAKLLADVEEEPIACLISDA-MLPF--TQAVADSLKLPRIVLRTGGASSFVVFAAFPLLKERGYFPIQDSKG 161 (457)
Q Consensus 85 ~~~~~~~~l~~l~~~~~~~~pDlvi~D~-~~~~--~~~~A~~l~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 161 (457)
....+.+.++.+.+. .. +||+||+|. +..+ +..+|+.+|||++.+.+.+... ...++| ....
T Consensus 77 ~~~~~~~~~~~l~~~-~~-~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~-----------~~~~~p-~~~~- 141 (416)
T 1rrv_A 77 AAMTVEMQFDAVPGA-AE-GCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYL-----------ASPHLP-PAYD- 141 (416)
T ss_dssp HHHHHHHHHHHHHHH-TT-TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGS-----------CCSSSC-CCBC-
T ss_pred HHHHHHHHHHHHHHH-hc-CCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCC-----------CCcccC-CCCC-
Confidence 112223344444321 11 899999997 4567 8899999999999987764221 011121 0000
Q ss_pred CccccCCCCCCCCCCCCCCCCC-Ch-h----HHHHHHhhh------------hccccccEEEEcCchhhhHHHHHHHHhh
Q 012735 162 QEPVVELPPLKIKDLPVINTRD-PE-T----LYEIVNGMV------------DGAKVSSGIIWNTFEDLEESALATLRQQ 223 (457)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~-~~-~----~~~~~~~~~------------~~~~~~~~~~~~~~~~le~~~~~~~~~~ 223 (457)
++ +............ .. . +........ +..... .++.++.++++++ +..
T Consensus 142 ---~~----~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~-----~~~ 208 (416)
T 1rrv_A 142 ---EP----TTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL-----QPD 208 (416)
T ss_dssp ---SC----CCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC-----CSS
T ss_pred ---CC----CCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC-----CCC
Confidence 00 0000000000000 00 0 000000111 111222 5788888888754 111
Q ss_pred cCCCccccCccccCCCCCCCCCccCccccccccCCCCCCcEEEEEeccccc-CCHHHHHHHHHHHhhCCCCeEEEECCCC
Q 012735 224 FSIPIFPIGPFHICIPASPSSLLTQDQSCIAWLDKQAPKSVIYVSFGSIAA-VSEAEFLEIAWGLANCKLPFLWVVRPGL 302 (457)
Q Consensus 224 ~~~p~~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~ 302 (457)
.+++++||+..+.. .+.+.++.+|++.. +++|||++||... ...+.+..++++++..+.+++|+++...
T Consensus 209 --~~~~~vG~~~~~~~------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~ 278 (416)
T 1rrv_A 209 --VDAVQTGAWLLSDE------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTE 278 (416)
T ss_dssp --CCCEECCCCCCCCC------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTT
T ss_pred --CCeeeECCCccCcc------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEeCCcc
Confidence 15889999986532 12334578898764 4789999999975 4567788899999999999999987643
Q ss_pred CCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCCCCCcccccChhHHHHHHhhCCcccccCccchhhHHHHHHHhh
Q 012735 303 TRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCFTDQKVNARYVSDV 382 (457)
Q Consensus 303 ~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~ 382 (457)
.. ...+ ++|+.+.+|+||.++|+++++ ||||||+||+.||+++|||+|++|...||+.||+++++
T Consensus 279 ~~----~~~~--------~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~- 343 (416)
T 1rrv_A 279 LV----LPDD--------RDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAA- 343 (416)
T ss_dssp CC----CSCC--------CTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHH-
T ss_pred cc----ccCC--------CCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHH-
Confidence 10 1123 345588999999999977777 99999999999999999999999999999999999999
Q ss_pred hccceecCC-CCCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH-HHHHH
Q 012735 383 WKVGLQLEN-GLKREEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSL-VTHIL 447 (457)
Q Consensus 383 lG~g~~l~~-~~~~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~ 447 (457)
.|+|+.++. .++++.|+++|+++ +| ++|++++++++++++ ..++. ++++.+ ++.++
T Consensus 344 ~g~g~~~~~~~~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~----~~~~~-~~~~~i~e~~~~ 401 (416)
T 1rrv_A 344 LGIGVAHDGPTPTFESLSAALTTV-LA---PETRARAEAVAGMVL----TDGAA-AAADLVLAAVGR 401 (416)
T ss_dssp HTSEEECSSSCCCHHHHHHHHHHH-TS---HHHHHHHHHHTTTCC----CCHHH-HHHHHHHHHHHC
T ss_pred CCCccCCCCCCCCHHHHHHHHHHh-hC---HHHHHHHHHHHHHHh----hcCcH-HHHHHHHHHHhc
Confidence 599999986 78999999999999 98 899999999999887 55666 777766 54443
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=2.5e-40 Score=321.71 Aligned_cols=377 Identities=18% Similarity=0.221 Sum_probs=258.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCCC----CCccCHHHHHHH-
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSSHPHLTFHFIQENLSASE----ASTDDLVAFVSL- 80 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~----~~~~~~~~~~~~- 80 (457)
++||+|++.++.||++|+++||++|+++||+|+|++++....... ..|+.+..++..++... ....+....+..
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVK-AAGAEVVLYKSEFDTFHVPEVVKQEDAETQLHLV 82 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHH-HTTCEEEECCCGGGTSSSSSSSCCTTHHHHHHHH
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHH-HcCCEEEecccccccccccccccccchHHHHHHH
Confidence 359999999999999999999999999999999999852222221 15789998885433221 112233333333
Q ss_pred HHHhcchhHHHHHHHHhhccCCCCeeEEEeC-CCcchHHHHHhHcCCCeEEEecchHHHHHHHHhhhhhhhcCCCCCCCC
Q 012735 81 LNTKCLVPFRDCLAKLLADVEEEPIACLISD-AMLPFTQAVADSLKLPRIVLRTGGASSFVVFAAFPLLKERGYFPIQDS 159 (457)
Q Consensus 81 ~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D-~~~~~~~~~A~~l~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 159 (457)
+.......+.+ +.++++.. +||+||+| ....++..+|+.+|||++.+.+....+..... .+....... . .
T Consensus 83 ~~~~~~~~~~~-l~~~l~~~---~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~-~~~~~~~~~-~-~-- 153 (402)
T 3ia7_A 83 YVRENVAILRA-AEEALGDN---PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSL-FKELWKSNG-Q-R-- 153 (402)
T ss_dssp HHHHHHHHHHH-HHHHHTTC---CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCH-HHHHHHHHT-C-C--
T ss_pred HHHHHHHHHHH-HHHHHhcc---CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccccc-ccccccccc-c-c--
Confidence 33333333333 33333333 99999999 77788999999999999998754321100000 000000000 0 0
Q ss_pred CCCccccCCCCCCCCCCCCCCCCCChhHHHHHHhhhhc----------ccc-ccEEEEcCchhhhHHHHHHHHhhcCCCc
Q 012735 160 KGQEPVVELPPLKIKDLPVINTRDPETLYEIVNGMVDG----------AKV-SSGIIWNTFEDLEESALATLRQQFSIPI 228 (457)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-~~~~~~~~~~~le~~~~~~~~~~~~~p~ 228 (457)
.+ .....+.+.+...... ... .+..+....+++++. ...++.++
T Consensus 154 -----~~---------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~ 208 (402)
T 3ia7_A 154 -----HP---------------ADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF-----AETFDERF 208 (402)
T ss_dssp -----CG---------------GGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT-----GGGCCTTE
T ss_pred -----Ch---------------hhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc-----cccCCCCe
Confidence 00 0001111111111110 111 144555565555543 34445558
Q ss_pred cccCccccCCCCCCCCCccCccccccccCCCCCCcEEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCCCCCC
Q 012735 229 FPIGPFHICIPASPSSLLTQDQSCIAWLDKQAPKSVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTRGSDC 308 (457)
Q Consensus 229 ~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~ 308 (457)
.++||....... ...|....+++++||+++||......+.+..++++++..+.+++|.++.+... +.
T Consensus 209 ~~vGp~~~~~~~-----------~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~ 275 (402)
T 3ia7_A 209 AFVGPTLTGRDG-----------QPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLDP--AV 275 (402)
T ss_dssp EECCCCCCC---------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSCG--GG
T ss_pred EEeCCCCCCccc-----------CCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCCh--hh
Confidence 999987654321 23455545567899999999988777888999999998888888887754210 00
Q ss_pred CCCCchhHHHhhcCCCccccccChHhhhcCCCCCCcccccChhHHHHHHhhCCcccccCc-cchhhHHHHHHHhhhccce
Q 012735 309 LEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPC-FTDQKVNARYVSDVWKVGL 387 (457)
Q Consensus 309 ~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~-~~DQ~~na~~v~~~lG~g~ 387 (457)
+..+ ++|+++.+|+|+.++|+++++ +|||||+||+.||+++|+|+|++|. ..||..|++++++ .|+|+
T Consensus 276 ~~~~--------~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~-~g~g~ 344 (402)
T 3ia7_A 276 LGPL--------PPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIE-LGLGS 344 (402)
T ss_dssp GCSC--------CTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHH-TTSEE
T ss_pred hCCC--------CCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHH-cCCEE
Confidence 1223 455589999999999999888 9999999999999999999999999 9999999999999 59999
Q ss_pred ecCC-CCCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 012735 388 QLEN-GLKREEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILS 448 (457)
Q Consensus 388 ~l~~-~~~~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (457)
.+.. .++++.|.++++++++| ++++++++++++++. +.++.+++++.+++.+++
T Consensus 345 ~~~~~~~~~~~l~~~~~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 345 VLRPDQLEPASIREAVERLAAD---SAVRERVRRMQRDIL----SSGGPARAADEVEAYLGR 399 (402)
T ss_dssp ECCGGGCSHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCHHHHHHHHHHHHHHH
T ss_pred EccCCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHh----hCChHHHHHHHHHHHHhh
Confidence 9987 78999999999999999 899999999999998 678889999988888764
No 12
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=3.6e-40 Score=324.20 Aligned_cols=374 Identities=13% Similarity=0.132 Sum_probs=244.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCC-C---------------C
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSSHPHLTFHFIQENLSA-S---------------E 68 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~i~~~~~~-~---------------~ 68 (457)
.+|||+|++.++.||++|+++||++|+++||+|+|++++....... ..|++++.++..... . .
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~-~~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 97 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDIT-AAGLTAVPVGTDVDLVDFMTHAGHDIIDYVRSL 97 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHH-TTTCCEEECSCCCCHHHHHHHTTHHHHHHHTTC
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHH-hCCCceeecCCccchHHHhhhhhcccccccccc
Confidence 4689999999999999999999999999999999999863222221 268999999864310 0 0
Q ss_pred C-----Cc-cCHH---HHHHHHHHhcc-----h-hHHHHHHHHhhccCCCCeeEEEeCCCcchHHHHHhHcCCCeEEEec
Q 012735 69 A-----ST-DDLV---AFVSLLNTKCL-----V-PFRDCLAKLLADVEEEPIACLISDAMLPFTQAVADSLKLPRIVLRT 133 (457)
Q Consensus 69 ~-----~~-~~~~---~~~~~~~~~~~-----~-~~~~~l~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~l~iP~v~~~~ 133 (457)
+ .. .... ..+..+...+. . .+.++++.+ +.. +||+||+|..+.++..+|+.+|||++.+..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~---~pDlVv~d~~~~~~~~aA~~lgiP~v~~~~ 173 (441)
T 2yjn_A 98 DFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFC-RKW---RPDLVIWEPLTFAAPIAAAVTGTPHARLLW 173 (441)
T ss_dssp CCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHH-HHH---CCSEEEECTTCTHHHHHHHHHTCCEEEECS
T ss_pred cccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHH-Hhc---CCCEEEecCcchhHHHHHHHcCCCEEEEec
Confidence 0 00 0111 11111222111 1 334333322 333 999999999778899999999999999876
Q ss_pred chHHHHHHHHhhhhhhhcCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCChhHHHHHHhhhhccc---------cccEE
Q 012735 134 GGASSFVVFAAFPLLKERGYFPIQDSKGQEPVVELPPLKIKDLPVINTRDPETLYEIVNGMVDGAK---------VSSGI 204 (457)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~ 204 (457)
.+........ +......+.+.. .....+.+.+....+.+. ..+..
T Consensus 174 ~~~~~~~~~~--~~~~~~~~~~~~------------------------~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~ 227 (441)
T 2yjn_A 174 GPDITTRARQ--NFLGLLPDQPEE------------------------HREDPLAEWLTWTLEKYGGPAFDEEVVVGQWT 227 (441)
T ss_dssp SCCHHHHHHH--HHHHHGGGSCTT------------------------TCCCHHHHHHHHHHHHTTCCCCCGGGTSCSSE
T ss_pred CCCcchhhhh--hhhhhccccccc------------------------cccchHHHHHHHHHHHcCCCCCCccccCCCeE
Confidence 5433211111 111111111100 000112222222211110 12334
Q ss_pred EEcCchhhhHHHHHHHHhhcC-CCccccCccccCCCCCCCCCccCccccccccCCCCCCcEEEEEecccccC---CHHHH
Q 012735 205 IWNTFEDLEESALATLRQQFS-IPIFPIGPFHICIPASPSSLLTQDQSCIAWLDKQAPKSVIYVSFGSIAAV---SEAEF 280 (457)
Q Consensus 205 ~~~~~~~le~~~~~~~~~~~~-~p~~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~---~~~~~ 280 (457)
+....+.++++ ..++ .++.+++ .. ...++.+|++..+++++|||++||.... ..+.+
T Consensus 228 l~~~~~~~~~~------~~~~~~~~~~~~---~~----------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~ 288 (441)
T 2yjn_A 228 IDPAPAAIRLD------TGLKTVGMRYVD---YN----------GPSVVPEWLHDEPERRRVCLTLGISSRENSIGQVSI 288 (441)
T ss_dssp EECSCGGGSCC------CCCCEEECCCCC---CC----------SSCCCCGGGSSCCSSCEEEEEC----------CCST
T ss_pred EEecCccccCC------CCCCCCceeeeC---CC----------CCcccchHhhcCCCCCEEEEECCCCcccccChHHHH
Confidence 44444433321 0010 0122221 00 1123667888666778999999999863 34567
Q ss_pred HHHHHHHhhCCCCeEEEECCCCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCCCCCcccccChhHHHHHHhhC
Q 012735 281 LEIAWGLANCKLPFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVGAFWTHNGWNSTLESICEG 360 (457)
Q Consensus 281 ~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~g 360 (457)
..++++++..+.+++|+.++..... +..+ ++|+++.+|+||.++|+++++ ||||||+||+.||+++|
T Consensus 289 ~~~~~al~~~~~~~v~~~g~~~~~~---l~~~--------~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~Ea~~~G 355 (441)
T 2yjn_A 289 EELLGAVGDVDAEIIATFDAQQLEG---VANI--------PDNVRTVGFVPMHALLPTCAA--TVHHGGPGSWHTAAIHG 355 (441)
T ss_dssp TTTHHHHHTSSSEEEECCCTTTTSS---CSSC--------CSSEEECCSCCHHHHGGGCSE--EEECCCHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEEEECCcchhh---hccC--------CCCEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhC
Confidence 7889999988899999887543111 1123 345589999999999977777 99999999999999999
Q ss_pred CcccccCccchhhHHHHHHHhhhccceecCC-CCCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHH
Q 012735 361 IPMICMPCFTDQKVNARYVSDVWKVGLQLEN-GLKREEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESI 439 (457)
Q Consensus 361 vP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~-~~~~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~ 439 (457)
||+|++|...||+.||+++++ .|+|+.++. .++++.|.++|+++++| ++++++++++++++. ..++.++++
T Consensus 356 ~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~ 427 (441)
T 2yjn_A 356 VPQVILPDGWDTGVRAQRTQE-FGAGIALPVPELTPDQLRESVKRVLDD---PAHRAGAARMRDDML----AEPSPAEVV 427 (441)
T ss_dssp CCEEECCCSHHHHHHHHHHHH-HTSEEECCTTTCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCCHHHHH
T ss_pred CCEEEeCCcccHHHHHHHHHH-cCCEEEcccccCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHH----cCCCHHHHH
Confidence 999999999999999999999 599999987 78999999999999999 899999999999998 678888888
Q ss_pred HHHHHHHHhc
Q 012735 440 NSLVTHILSL 449 (457)
Q Consensus 440 ~~~~~~~~~~ 449 (457)
+.+++.+.+.
T Consensus 428 ~~i~~~~~~~ 437 (441)
T 2yjn_A 428 GICEELAAGR 437 (441)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHHhc
Confidence 8888877653
No 13
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=1.3e-40 Score=323.18 Aligned_cols=368 Identities=13% Similarity=0.086 Sum_probs=245.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCCCC-CccCHHHHHHHHHHhc
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSSHPHLTFHFIQENLSASEA-STDDLVAFVSLLNTKC 85 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~ 85 (457)
|||+|++.++.||++|+++||++|+++||+|+|++++....... ..|+.+.+++........ .......+...+...
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~-~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~- 78 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCA-EVGVPMVPVGRAVRAGAREPGELPPGAAEVVTEV- 78 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHH-HTTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHH-
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHH-HcCCceeecCCCHHHHhccccCCHHHHHHHHHHH-
Confidence 68999999999999999999999999999999999852211121 268899998754321100 000000011111111
Q ss_pred chhHHHHHHHHhhccCCCCeeEEEeCCCcchH---HHHHhHcCCCeEEEecchHHHHHHHHh-hhhhhhcCCCCCCCCCC
Q 012735 86 LVPFRDCLAKLLADVEEEPIACLISDAMLPFT---QAVADSLKLPRIVLRTGGASSFVVFAA-FPLLKERGYFPIQDSKG 161 (457)
Q Consensus 86 ~~~~~~~l~~l~~~~~~~~pDlvi~D~~~~~~---~~~A~~l~iP~v~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~ 161 (457)
+.+.++.+.+... +||+||+|..+..+ ..+|+.+|||++.+...+......... .....+.
T Consensus 79 ---~~~~~~~l~~~~~--~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~~~---------- 143 (404)
T 3h4t_A 79 ---VAEWFDKVPAAIE--GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQ---------- 143 (404)
T ss_dssp ---HHHHHHHHHHHHT--TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHH----------
T ss_pred ---HHHHHHHHHHHhc--CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHHHH----------
Confidence 1222222222111 79999998665444 789999999999988775421000000 0000000
Q ss_pred CccccCCCCCCCCCCCCCCCCCChhHHHHHHhhhhcc-----------ccccEEEEcCchhhhHHHHHHHHhhcCCCccc
Q 012735 162 QEPVVELPPLKIKDLPVINTRDPETLYEIVNGMVDGA-----------KVSSGIIWNTFEDLEESALATLRQQFSIPIFP 230 (457)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~le~~~~~~~~~~~~~p~~~ 230 (457)
.....+.+......... ...+..+.+..+.+.+. +.++..+++
T Consensus 144 --------------------~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~------~~~~~~~~~ 197 (404)
T 3h4t_A 144 --------------------GADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL------RPTDLGTVQ 197 (404)
T ss_dssp --------------------HHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC------CTTCCSCCB
T ss_pred --------------------HHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC------CCCCCCeEE
Confidence 00000000000000000 00122355666666442 112234788
Q ss_pred cCccccCCCCCCCCCccCccccccccCCCCCCcEEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCC
Q 012735 231 IGPFHICIPASPSSLLTQDQSCIAWLDKQAPKSVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLE 310 (457)
Q Consensus 231 vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~ 310 (457)
+|++..+... ..+ +++.+|++. .+++|||++||... +.+.+..+++++++.+.+++|+.+...... .
T Consensus 198 ~G~~~~~~~~----~~~--~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~~~~----~ 264 (404)
T 3h4t_A 198 TGAWILPDQR----PLS--AELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAGLGR----I 264 (404)
T ss_dssp CCCCCCCCCC----CCC--HHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTTCCC----S
T ss_pred eCccccCCCC----CCC--HHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCccccc----c
Confidence 9987655322 233 447888875 35789999999987 678889999999999999999987643111 1
Q ss_pred CCchhHHHhhcCCCccccccChHhhhcCCCCCCcccccChhHHHHHHhhCCcccccCccchhhHHHHHHHhhhccceecC
Q 012735 311 PLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVGLQLE 390 (457)
Q Consensus 311 ~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~ 390 (457)
.++ +|+++.+|+||.++|+++++ ||||||+||+.|++++|+|+|++|...||+.||+++++ +|+|+.++
T Consensus 265 ~~~--------~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~-~G~g~~l~ 333 (404)
T 3h4t_A 265 DEG--------DDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVAD-LGVGVAHD 333 (404)
T ss_dssp SCC--------TTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEEECS
T ss_pred cCC--------CCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHH-CCCEeccC
Confidence 123 45589999999999987777 99999999999999999999999999999999999999 59999998
Q ss_pred C-CCCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcc
Q 012735 391 N-GLKREEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILSLE 450 (457)
Q Consensus 391 ~-~~~~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (457)
. .++++.|.++|+++++ ++|+++++++++.+. . ++.+++++.+++.+++..
T Consensus 334 ~~~~~~~~l~~ai~~ll~----~~~~~~~~~~~~~~~----~-~~~~~~~~~i~~~~~~~~ 385 (404)
T 3h4t_A 334 GPTPTVESLSAALATALT----PGIRARAAAVAGTIR----T-DGTTVAAKLLLEAISRQR 385 (404)
T ss_dssp SSSCCHHHHHHHHHHHTS----HHHHHHHHHHHTTCC----C-CHHHHHHHHHHHHHHC--
T ss_pred cCCCCHHHHHHHHHHHhC----HHHHHHHHHHHHHHh----h-hHHHHHHHHHHHHHhhCC
Confidence 7 7899999999999997 389999999999987 6 778888888888776543
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=2e-39 Score=313.42 Aligned_cols=357 Identities=12% Similarity=0.079 Sum_probs=249.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCC------------CCCccCH
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSSHPHLTFHFIQENLSAS------------EASTDDL 74 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~i~~~~~~~------------~~~~~~~ 74 (457)
|||++++.++.||++|+++||++|+++||+|++++++....... ..|+.++.++...... .......
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVT-GVGLPAVATTDLPIRHFITTDREGRPEAIPSDPVA 79 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHH-HTTCCEEESCSSCHHHHHHBCTTSCBCCCCCSHHH
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHH-hCCCEEEEeCCcchHHHHhhhcccCccccCcchHH
Confidence 68999999999999999999999999999999999863211111 1578888887532100 0000011
Q ss_pred HHHH-HH-HHHhcchhHHHHHHHHhhccCCCCeeEEEeCCCcchHHHHHhHcCCCeEEEecchHHHHHHHHhhhhhhhcC
Q 012735 75 VAFV-SL-LNTKCLVPFRDCLAKLLADVEEEPIACLISDAMLPFTQAVADSLKLPRIVLRTGGASSFVVFAAFPLLKERG 152 (457)
Q Consensus 75 ~~~~-~~-~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~l~iP~v~~~~~~~~~~~~~~~~~~~~~~~ 152 (457)
...+ .. +...+...+.++.+ +++.. +||+||+|....++..+|+.+|||++.+...+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~-~l~~~---~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~--------------- 140 (384)
T 2p6p_A 80 QARFTGRWFARMAASSLPRMLD-FSRAW---RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD--------------- 140 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHHHH---CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC---------------
T ss_pred HHHHHHHHHHhhHHHHHHHHHH-HHhcc---CCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc---------------
Confidence 1111 11 11222222333332 22323 8999999987788899999999999987543110
Q ss_pred CCCCCCCCCCccccCCCCCCCCCCCCCCCCCChhHHHHHHhhhhc-----cccccEEEEcCchhhhHHHHHHHHhhcC-C
Q 012735 153 YFPIQDSKGQEPVVELPPLKIKDLPVINTRDPETLYEIVNGMVDG-----AKVSSGIIWNTFEDLEESALATLRQQFS-I 226 (457)
Q Consensus 153 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~le~~~~~~~~~~~~-~ 226 (457)
+ +. ....+.......... ...++.++.++.+.++++. + ++ .
T Consensus 141 --~---~~----------------------~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~-----~-~~~~ 187 (384)
T 2p6p_A 141 --A---DG----------------------IHPGADAELRPELSELGLERLPAPDLFIDICPPSLRPAN-----A-APAR 187 (384)
T ss_dssp --C---TT----------------------THHHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCTT-----S-CCCE
T ss_pred --c---ch----------------------hhHHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCCC-----C-CCCC
Confidence 0 00 000011111111111 1125677888888776431 1 11 1
Q ss_pred CccccCccccCCCCCCCCCccCccccccccCCCCCCcEEEEEecccccC-----CHHHHHHHHHHHhhCCCCeEEEECCC
Q 012735 227 PIFPIGPFHICIPASPSSLLTQDQSCIAWLDKQAPKSVIYVSFGSIAAV-----SEAEFLEIAWGLANCKLPFLWVVRPG 301 (457)
Q Consensus 227 p~~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~-----~~~~~~~~~~al~~~~~~~i~~~~~~ 301 (457)
++.+++. . . ..++.+|++..+++++||+++||.... +.+.+..+++++++.+.+++|+.++.
T Consensus 188 ~~~~~~~-~--~----------~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~ 254 (384)
T 2p6p_A 188 MMRHVAT-S--R----------QCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDT 254 (384)
T ss_dssp ECCCCCC-C--C----------CCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHH
T ss_pred ceEecCC-C--C----------CCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCC
Confidence 2444421 1 0 122567887655678999999999864 45778889999998888999987632
Q ss_pred CCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCCCCCcccccChhHHHHHHhhCCcccccCccchhhHHHHHHHh
Q 012735 302 LTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCFTDQKVNARYVSD 381 (457)
Q Consensus 302 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~ 381 (457)
. .+.+ +..++|+.+ +|+||.++|+++++ ||||||+||+.||+++|+|+|++|...||..|++++++
T Consensus 255 ~----------~~~l-~~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~ 320 (384)
T 2p6p_A 255 V----------AEAL-RAEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVAD 320 (384)
T ss_dssp H----------HHHH-HHHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHH
T ss_pred C----------HHhh-CCCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHH
Confidence 1 1222 235678899 99999999988777 99999999999999999999999999999999999999
Q ss_pred hhccceecCC-CCCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhccc
Q 012735 382 VWKVGLQLEN-GLKREEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILSLET 451 (457)
Q Consensus 382 ~lG~g~~l~~-~~~~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (457)
.|+|+.++. .++++.|.++|+++++| +++++++++++++++ ...+.+++++.+++++.-|++
T Consensus 321 -~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~~~~ 383 (384)
T 2p6p_A 321 -YGAAIALLPGEDSTEAIADSCQELQAK---DTYARRAQDLSREIS----GMPLPATVVTALEQLAHHHHH 383 (384)
T ss_dssp -HTSEEECCTTCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCCHHHHHHHHHHHHHHHC-
T ss_pred -CCCeEecCcCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hCCCHHHHHHHHHHHhhhccC
Confidence 599999987 78999999999999999 899999999999998 677899999999888877664
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.9e-38 Score=311.14 Aligned_cols=380 Identities=15% Similarity=0.162 Sum_probs=251.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCCCCC----ccCHHHHHHHH
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSSHPHLTFHFIQENLSASEAS----TDDLVAFVSLL 81 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~----~~~~~~~~~~~ 81 (457)
++||+|++.++.||++|+++||++|+++||+|+++++......... .|++++.++...+..... ..+....+..+
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA-TGPRPVLYHSTLPGPDADPEAWGSTLLDNVEPF 85 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT-TSCEEEECCCCSCCTTSCGGGGCSSHHHHHHHH
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh-CCCEEEEcCCcCccccccccccchhhHHHHHHH
Confidence 4799999999999999999999999999999999998633221222 588999888654322211 12333333333
Q ss_pred HHhcchhHHHHHHHHhhccCCCCeeEEEeCCCcchHHHHHhHcCCCeEEEecchHHHHHHHHhhhhhhhcCCCCCCCCCC
Q 012735 82 NTKCLVPFRDCLAKLLADVEEEPIACLISDAMLPFTQAVADSLKLPRIVLRTGGASSFVVFAAFPLLKERGYFPIQDSKG 161 (457)
Q Consensus 82 ~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~l~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 161 (457)
...+...+.. +.++++.. +||+||+|....++..+|+.+|||+|.+.+.+..........+.+..
T Consensus 86 ~~~~~~~~~~-l~~~l~~~---~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~----------- 150 (430)
T 2iyf_A 86 LNDAIQALPQ-LADAYADD---IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMW----------- 150 (430)
T ss_dssp HHHHHHHHHH-HHHHHTTS---CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHH-----------
T ss_pred HHHHHHHHHH-HHHHhhcc---CCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchh-----------
Confidence 3323332333 33343333 99999999877789999999999999987654210000000000000
Q ss_pred CccccCCCCCCCCCCCCCCCCCChhHHHHHHhh------hhccccccEEEEcCchhhhHHHHHHHHhhcCCC-ccccCcc
Q 012735 162 QEPVVELPPLKIKDLPVINTRDPETLYEIVNGM------VDGAKVSSGIIWNTFEDLEESALATLRQQFSIP-IFPIGPF 234 (457)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~p-~~~vGp~ 234 (457)
......+.+. .....+.+..... .+.....+.++.++.+.+++. ...++.+ ++++||.
T Consensus 151 -~~~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~v~~vG~~ 215 (430)
T 2iyf_A 151 -REPRQTERGR---------AYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPH-----ADRVDEDVYTFVGAC 215 (430)
T ss_dssp -HHHHHSHHHH---------HHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTT-----GGGSCTTTEEECCCC
T ss_pred -hhhccchHHH---------HHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCC-----cccCCCccEEEeCCc
Confidence 0000000000 0000011111110 001113577888888887754 1334556 8899986
Q ss_pred ccCCCCCCCCCccCccccccccCCCCCCcEEEEEecccccCCHHHHHHHHHHHhhC-CCCeEEEECCCCCCCCCCCCCCc
Q 012735 235 HICIPASPSSLLTQDQSCIAWLDKQAPKSVIYVSFGSIAAVSEAEFLEIAWGLANC-KLPFLWVVRPGLTRGSDCLEPLP 313 (457)
Q Consensus 235 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~lp 313 (457)
...... ..+|.+..+++++||+++||......+.+..++++++.. +.+++|.++.+.. .
T Consensus 216 ~~~~~~-----------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~---------~ 275 (430)
T 2iyf_A 216 QGDRAE-----------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVT---------P 275 (430)
T ss_dssp C----------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---C---------G
T ss_pred CCCCCC-----------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCC---------h
Confidence 532111 124554445678999999999855678888999999886 7788888865421 0
Q ss_pred hhHHHhhcCCCccccccChHhhhcCCCCCCcccccChhHHHHHHhhCCcccccCccchhhHHHHHHHhhhccceecCC-C
Q 012735 314 SGFMEMVDGRGHLVKWAPQQEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVGLQLEN-G 392 (457)
Q Consensus 314 ~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~-~ 392 (457)
+.+ +..++|+.+.+|+||.++|+++++ ||||||+||+.||+++|+|+|++|..+||..|++++++ .|+|+.+.. .
T Consensus 276 ~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~-~g~g~~~~~~~ 351 (430)
T 2iyf_A 276 AEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQG-LGVARKLATEE 351 (430)
T ss_dssp GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-TTSEEECCCC-
T ss_pred HHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHH-cCCEEEcCCCC
Confidence 111 112456689999999999999988 99999999999999999999999999999999999999 599999987 7
Q ss_pred CCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 012735 393 LKREEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHIL 447 (457)
Q Consensus 393 ~~~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (457)
++++.|.++|.++++| +.+++++.++++++. +.++.++.++.+++.++
T Consensus 352 ~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~ 399 (430)
T 2iyf_A 352 ATADLLRETALALVDD---PEVARRLRRIQAEMA----QEGGTRRAADLIEAELP 399 (430)
T ss_dssp CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----HHCHHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hcCcHHHHHHHHHHHhh
Confidence 8999999999999999 899999999998887 34566777777665543
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=1.1e-37 Score=302.60 Aligned_cols=355 Identities=13% Similarity=0.130 Sum_probs=222.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCC---------CCC--CCcc
Q 012735 4 RKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSSHPHLTFHFIQENLS---------ASE--ASTD 72 (457)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~i~~~~~---------~~~--~~~~ 72 (457)
..+|||+|++.++.||++|+++|+++|+++||+|++++++....... ..|+.++.++.... ... ....
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVT-GAGLPFAPTCPSLDMPEVLSWDREGNRTTMPR 91 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHH-HTTCCEEEEESSCCHHHHHSBCTTSCBCCCCS
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHH-hCCCeeEecCCccchHhhhhhhccCccccccc
Confidence 45799999999999999999999999999999999999852211111 15777887763111 000 0001
Q ss_pred CHHHHH----HHHHHhcchhHHHHHHHHhhccCCCCeeEEEeCCCcchHHHHHhHcCCCeEEEecchHHHHHHHHhhhhh
Q 012735 73 DLVAFV----SLLNTKCLVPFRDCLAKLLADVEEEPIACLISDAMLPFTQAVADSLKLPRIVLRTGGASSFVVFAAFPLL 148 (457)
Q Consensus 73 ~~~~~~----~~~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~l~iP~v~~~~~~~~~~~~~~~~~~~ 148 (457)
.....+ ..+.......+.+ +.++++.. +||+|++|....++..+|+.+|||++.+...........
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~---~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~------ 161 (398)
T 4fzr_A 92 EEKPLLEHIGRGYGRLVLRMRDE-ALALAERW---KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIK------ 161 (398)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH---CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHH------
T ss_pred chhhHHHHHHHHHHHHHHHHHHH-HHHHHHhC---CCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhh------
Confidence 111111 1112222222222 33333333 999999998778899999999999998765432111000
Q ss_pred hhcCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCChhHHHHHHhhhh-----ccccccEEEEcCchhhhHHHHHHHHhh
Q 012735 149 KERGYFPIQDSKGQEPVVELPPLKIKDLPVINTRDPETLYEIVNGMVD-----GAKVSSGIIWNTFEDLEESALATLRQQ 223 (457)
Q Consensus 149 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~le~~~~~~~~~~ 223 (457)
....+.+..... .....+..+....+.+.... ..
T Consensus 162 ------------------------------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 200 (398)
T 4fzr_A 162 ------------------------------------SAGVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQP-----KP 200 (398)
T ss_dssp ------------------------------------HHHHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC---------C
T ss_pred ------------------------------------HHHHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCCC-----CC
Confidence 000111111111 01122334444444444321 00
Q ss_pred cCCCccccCccccCCCCCCCCCccCccccccccCCCCCCcEEEEEecccccC--------CHHHHHHHHHHHhhCCCCeE
Q 012735 224 FSIPIFPIGPFHICIPASPSSLLTQDQSCIAWLDKQAPKSVIYVSFGSIAAV--------SEAEFLEIAWGLANCKLPFL 295 (457)
Q Consensus 224 ~~~p~~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~--------~~~~~~~~~~al~~~~~~~i 295 (457)
...++.++++.. ...++..|+...+++++||+++||.... ..+.+..+++++++.+.+++
T Consensus 201 ~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v 268 (398)
T 4fzr_A 201 GTTKMRYVPYNG------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVV 268 (398)
T ss_dssp CCEECCCCCCCC------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEE
T ss_pred CCCCeeeeCCCC------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEE
Confidence 011133332210 1122456766555678999999999752 34567889999998888888
Q ss_pred EEECCCCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCCCCCcccccChhHHHHHHhhCCcccccCccchhhHH
Q 012735 296 WVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCFTDQKVN 375 (457)
Q Consensus 296 ~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~DQ~~n 375 (457)
|+.++..... +..+ ++|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...||+.|
T Consensus 269 ~~~~~~~~~~---l~~~--------~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~ 335 (398)
T 4fzr_A 269 VAVSDKLAQT---LQPL--------PEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDS 335 (398)
T ss_dssp ECCCC-----------C--------CTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGGGHHH
T ss_pred EEeCCcchhh---hccC--------CCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchhHHHH
Confidence 8876542111 2223 455589999999999999888 99999999999999999999999999999999
Q ss_pred HHHHHhhhccceecCC-CCCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 012735 376 ARYVSDVWKVGLQLEN-GLKREEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLV 443 (457)
Q Consensus 376 a~~v~~~lG~g~~l~~-~~~~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~ 443 (457)
++++++ .|+|+.++. .++++.|.++|.++++| +++++++++.++++. +..+.++.++.++
T Consensus 336 a~~~~~-~g~g~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~l~ 396 (398)
T 4fzr_A 336 ARLLHA-AGAGVEVPWEQAGVESVLAACARIRDD---SSYVGNARRLAAEMA----TLPTPADIVRLIE 396 (398)
T ss_dssp HHHHHH-TTSEEECC-------CHHHHHHHHHHC---THHHHHHHHHHHHHT----TSCCHHHHHHHHT
T ss_pred HHHHHH-cCCEEecCcccCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHH----cCCCHHHHHHHHh
Confidence 999999 499999987 78999999999999999 899999999999998 5666666665543
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=4.3e-37 Score=298.38 Aligned_cols=353 Identities=15% Similarity=0.157 Sum_probs=234.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCC------------------
Q 012735 4 RKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSSHPHLTFHFIQENLS------------------ 65 (457)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~i~~~~~------------------ 65 (457)
.++|||+|++.++.||++|+++||++|.++||+|+++++ ....... ..|+.++.++....
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAA-AAGLEVVDVAPDYSAVKVFEQVAKDNPRFAET 95 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHH-TTTCEEEESSTTCCHHHHHHHHHHHCHHHHHT
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHH-hCCCeeEecCCccCHHHHhhhcccCCcccccc
Confidence 346899999999999999999999999999999999998 2222222 26899999885311
Q ss_pred ---CCCCCccCHHHHHHHHHHhcchhHHHHHHHHhhccCCCCeeEEEeCCCcchHHHHHhHcCCCeEEEecchHHHHHHH
Q 012735 66 ---ASEASTDDLVAFVSLLNTKCLVPFRDCLAKLLADVEEEPIACLISDAMLPFTQAVADSLKLPRIVLRTGGASSFVVF 142 (457)
Q Consensus 66 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~l~iP~v~~~~~~~~~~~~~ 142 (457)
............+. ......+.++ .+++++. +||+||+|...+++..+|+.+|||++.+...........
T Consensus 96 ~~~~~~~~~~~~~~~~~---~~~~~~~~~l-~~~l~~~---~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~ 168 (398)
T 3oti_A 96 VATRPAIDLEEWGVQIA---AVNRPLVDGT-MALVDDY---RPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRTRGMH 168 (398)
T ss_dssp GGGSCCCSGGGGHHHHH---HHHGGGHHHH-HHHHHHH---CCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCCTTHH
T ss_pred ccCChhhhHHHHHHHHH---HHHHHHHHHH-HHHHHHc---CCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCccchh
Confidence 00111111122222 2222223322 2333333 999999998888899999999999998654311000000
Q ss_pred HhhhhhhhcCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCChhHHHHHHhhhhccccccEEEEcCchhhhHHHHHHHHh
Q 012735 143 AAFPLLKERGYFPIQDSKGQEPVVELPPLKIKDLPVINTRDPETLYEIVNGMVDGAKVSSGIIWNTFEDLEESALATLRQ 222 (457)
Q Consensus 143 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~ 222 (457)
. .....+.....+..-.....+..+....+.+..+ ..
T Consensus 169 --------------------~------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 205 (398)
T 3oti_A 169 --------------------R------------------SIASFLTDLMDKHQVSLPEPVATIESFPPSLLLE-----AE 205 (398)
T ss_dssp --------------------H------------------HHHTTCHHHHHHTTCCCCCCSEEECSSCGGGGTT-----SC
T ss_pred --------------------h------------------HHHHHHHHHHHHcCCCCCCCCeEEEeCCHHHCCC-----CC
Confidence 0 0000001111111100122233343333333221 00
Q ss_pred hcCCCccccCccccCCCCCCCCCccCccccccccCCCCCCcEEEEEecccccC--CHHHHHHHHHHHhhCCCCeEEEECC
Q 012735 223 QFSIPIFPIGPFHICIPASPSSLLTQDQSCIAWLDKQAPKSVIYVSFGSIAAV--SEAEFLEIAWGLANCKLPFLWVVRP 300 (457)
Q Consensus 223 ~~~~p~~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~--~~~~~~~~~~al~~~~~~~i~~~~~ 300 (457)
....++.++ |. ....++.+|+...+++++||+++||.... ..+.+..+++++++.+.+++|+.++
T Consensus 206 ~~~~~~~~~-~~------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~ 272 (398)
T 3oti_A 206 PEGWFMRWV-PY------------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGD 272 (398)
T ss_dssp CCSBCCCCC-CC------------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTT
T ss_pred CCCCCcccc-CC------------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECC
Confidence 001112221 10 01122456776556778999999999652 5677888999999888899988876
Q ss_pred CCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCCCCCcccccChhHHHHHHhhCCcccccCccchhhHHH--HH
Q 012735 301 GLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCFTDQKVNA--RY 378 (457)
Q Consensus 301 ~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~DQ~~na--~~ 378 (457)
..... +..++ +|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...||..|+ ++
T Consensus 273 ~~~~~---l~~~~--------~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~ 339 (398)
T 3oti_A 273 LDISP---LGTLP--------RNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREA 339 (398)
T ss_dssp SCCGG---GCSCC--------TTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHH
T ss_pred cChhh---hccCC--------CcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHH
Confidence 42111 22233 45589999999999988888 999999999999999999999999999999999 99
Q ss_pred HHhhhccceecCC-CCCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 012735 379 VSDVWKVGLQLEN-GLKREEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHI 446 (457)
Q Consensus 379 v~~~lG~g~~l~~-~~~~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (457)
+++ .|+|+.++. ..+++.|. ++++| ++++++++++++++. +..+.++.++.+++.+
T Consensus 340 ~~~-~g~g~~~~~~~~~~~~l~----~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 340 VSR-RGIGLVSTSDKVDADLLR----RLIGD---ESLRTAAREVREEMV----ALPTPAETVRRIVERI 396 (398)
T ss_dssp HHH-HTSEEECCGGGCCHHHHH----HHHHC---HHHHHHHHHHHHHHH----TSCCHHHHHHHHHHHH
T ss_pred HHH-CCCEEeeCCCCCCHHHHH----HHHcC---HHHHHHHHHHHHHHH----hCCCHHHHHHHHHHHh
Confidence 999 599999987 77888877 88889 899999999999998 6777888888777654
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=2.6e-35 Score=285.22 Aligned_cols=356 Identities=15% Similarity=0.199 Sum_probs=232.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCeeEEec-CCCCCCCC---------------C
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSSHPHLTFHFI-QENLSASE---------------A 69 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~i-~~~~~~~~---------------~ 69 (457)
+|||+|++.++.||++|+++|+++|+++||+|++++++....... ..|+.++.+ +....... .
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAH-GAGLTTAGIRGNDRTGDTGGTTQLRFPNPAFGQR 79 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHH-HBTCEEEEC--------------CCSCCGGGGCT
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHH-hCCCceeeecCCccchhhhhhhcccccccccccc
Confidence 589999999999999999999999999999999999752111111 157788877 32110000 0
Q ss_pred CccCHHHHHHHHHHhc----chhHHHHHHHHhhccCCCCeeEEEeCCCcchHHHHHhHcCCCeEEEecchHHHHHHHHhh
Q 012735 70 STDDLVAFVSLLNTKC----LVPFRDCLAKLLADVEEEPIACLISDAMLPFTQAVADSLKLPRIVLRTGGASSFVVFAAF 145 (457)
Q Consensus 70 ~~~~~~~~~~~~~~~~----~~~~~~~l~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~l~iP~v~~~~~~~~~~~~~~~~ 145 (457)
........+....... ...+.+ +.++++.. +||+||+|...+.+..+|+.+|||++.+.........
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~l~~~---~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~----- 150 (391)
T 3tsa_A 80 DTEAGRQLWEQTASNVAQSSLDQLPE-YLRLAEAW---RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPTAG----- 150 (391)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH---CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCTTT-----
T ss_pred cchhHHHHHHHHHHHHhhcchhhHHH-HHHHHHhc---CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccccc-----
Confidence 0011111111111111 000222 23333333 9999999987788899999999999997644210000
Q ss_pred hhhhhcCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCChhHHHHHHhhhhcc-----ccccEEEEcCchhhhHHHHHHH
Q 012735 146 PLLKERGYFPIQDSKGQEPVVELPPLKIKDLPVINTRDPETLYEIVNGMVDGA-----KVSSGIIWNTFEDLEESALATL 220 (457)
Q Consensus 146 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~le~~~~~~~ 220 (457)
.......++.......+ ...+..+....++++..
T Consensus 151 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 189 (391)
T 3tsa_A 151 ------------------------------------PFSDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQAS----- 189 (391)
T ss_dssp ------------------------------------HHHHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCT-----
T ss_pred ------------------------------------cccchHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCC-----
Confidence 00011122222221111 11244444444444322
Q ss_pred HhhcCCCccccCccccCCCCCCCCCccCccccccccCCCCCCcEEEEEeccccc--CC-HHHHHHHHHHHhhC-CCCeEE
Q 012735 221 RQQFSIPIFPIGPFHICIPASPSSLLTQDQSCIAWLDKQAPKSVIYVSFGSIAA--VS-EAEFLEIAWGLANC-KLPFLW 296 (457)
Q Consensus 221 ~~~~~~p~~~vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~--~~-~~~~~~~~~al~~~-~~~~i~ 296 (457)
......++.++ |.. ....+..|+...+++++|++++||... .. .+.+..++++ ++. +.+++|
T Consensus 190 ~~~~~~~~~~~-p~~------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~ 255 (391)
T 3tsa_A 190 DAPQGAPVQYV-PYN------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVI 255 (391)
T ss_dssp TSCCCEECCCC-CCC------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEE
T ss_pred CCCccCCeeee-cCC------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEE
Confidence 00001112333 111 112245677665677899999999954 23 7778888888 877 677887
Q ss_pred EECCCCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCCCCCcccccChhHHHHHHhhCCcccccCccchhhHHH
Q 012735 297 VVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCFTDQKVNA 376 (457)
Q Consensus 297 ~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~DQ~~na 376 (457)
..++..... +..+ ++|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...||..|+
T Consensus 256 ~~~~~~~~~---l~~~--------~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a 322 (391)
T 3tsa_A 256 AVPPEHRAL---LTDL--------PDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQFDYA 322 (391)
T ss_dssp ECCGGGGGG---CTTC--------CTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHHHHH
T ss_pred EECCcchhh---cccC--------CCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHHHHH
Confidence 776532111 2223 345589999999999987777 999999999999999999999999999999999
Q ss_pred HHHHhhhccceecCC---CCCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 012735 377 RYVSDVWKVGLQLEN---GLKREEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHIL 447 (457)
Q Consensus 377 ~~v~~~lG~g~~l~~---~~~~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (457)
+++++. |+|+.+.. ..+++.|.+++.++++| ++++++++++++++. +.++.+++++.+++.+.
T Consensus 323 ~~~~~~-g~g~~~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 323 RNLAAA-GAGICLPDEQAQSDHEQFTDSIATVLGD---TGFAAAAIKLSDEIT----AMPHPAALVRTLENTAA 388 (391)
T ss_dssp HHHHHT-TSEEECCSHHHHTCHHHHHHHHHHHHTC---THHHHHHHHHHHHHH----TSCCHHHHHHHHHHC--
T ss_pred HHHHHc-CCEEecCcccccCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----cCCCHHHHHHHHHHHHh
Confidence 999994 99999875 37899999999999999 899999999999998 77788888888776654
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=4.6e-33 Score=271.40 Aligned_cols=360 Identities=17% Similarity=0.199 Sum_probs=241.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCC------------CCCCCCc
Q 012735 4 RKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSSHPHLTFHFIQENL------------SASEAST 71 (457)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~i~~~~------------~~~~~~~ 71 (457)
..+|||+|++.++.||++|+++||++|+++||+|++++++...... ...|+.++.++... .......
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTL-RKLGFEPVATGMPVFDGFLAALRIRFDTDSPEG 96 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHH-HHTTCEEEECCCCHHHHHHHHHHHHHSCSCCTT
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHH-HhcCCceeecCcccccchhhhhhhhhcccCCcc
Confidence 3579999999999999999999999999999999999985211111 12578888887410 0000000
Q ss_pred cCHHHH----HHHHHHh-cchhHHHHHHHHhhccCCCCeeEEEeCCCcchHHHHHhHcCCCeEEEecchHHHHHHHHhhh
Q 012735 72 DDLVAF----VSLLNTK-CLVPFRDCLAKLLADVEEEPIACLISDAMLPFTQAVADSLKLPRIVLRTGGASSFVVFAAFP 146 (457)
Q Consensus 72 ~~~~~~----~~~~~~~-~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~l~iP~v~~~~~~~~~~~~~~~~~ 146 (457)
...... ...+... ....+.. +.+++++. +||+||+|....++..+|+.+|||+|.+.........
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~l~~~---~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~------ 166 (412)
T 3otg_A 97 LTPEQLSELPQIVFGRVIPQRVFDE-LQPVIERL---RPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTPDD------ 166 (412)
T ss_dssp CCHHHHTTSHHHHHHTHHHHHHHHH-HHHHHHHH---CCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCCSH------
T ss_pred CChhHhhHHHHHHHhccchHHHHHH-HHHHHHhc---CCCEEEECchhhHHHHHHHHcCCCEEEecccccCchh------
Confidence 011111 1111111 1111122 22333333 9999999987777889999999999986544211000
Q ss_pred hhhhcCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCChhHHHHHHhhhhc----------cccccEEEEcCchhhhHHH
Q 012735 147 LLKERGYFPIQDSKGQEPVVELPPLKIKDLPVINTRDPETLYEIVNGMVDG----------AKVSSGIIWNTFEDLEESA 216 (457)
Q Consensus 147 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~le~~~ 216 (457)
....+.+.+...... ...++.++..+.+.++..
T Consensus 167 ------------------------------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~- 209 (412)
T 3otg_A 167 ------------------------------------LTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEP- 209 (412)
T ss_dssp ------------------------------------HHHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCH-
T ss_pred ------------------------------------hhHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCC-
Confidence 001111111111111 123455566555555432
Q ss_pred HHHHHhhcCC---CccccCccccCCCCCCCCCccCccccccc-cCCCCCCcEEEEEecccccCCHHHHHHHHHHHhhCCC
Q 012735 217 LATLRQQFSI---PIFPIGPFHICIPASPSSLLTQDQSCIAW-LDKQAPKSVIYVSFGSIAAVSEAEFLEIAWGLANCKL 292 (457)
Q Consensus 217 ~~~~~~~~~~---p~~~vGp~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~ 292 (457)
...+.. |+.++++- ...++..| ....+++++|++++||......+.+..+++++++.+.
T Consensus 210 ----~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~ 272 (412)
T 3otg_A 210 ----EFRARPRRHELRPVPFA-------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDA 272 (412)
T ss_dssp ----HHHTCTTEEECCCCCCC-------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSS
T ss_pred ----cccCCCCcceeeccCCC-------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCC
Confidence 111111 12222211 11123455 2323467899999999976678888999999998888
Q ss_pred CeEEEECCCCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCCCCCcccccChhHHHHHHhhCCcccccCccchh
Q 012735 293 PFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCFTDQ 372 (457)
Q Consensus 293 ~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~DQ 372 (457)
+++|..++.... +.+..++ +|+.+.+|+|+.++|+++++ ||+|||+||++||+++|+|+|++|...||
T Consensus 273 ~~~~~~g~~~~~--~~l~~~~--------~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q 340 (412)
T 3otg_A 273 DVLVASGPSLDV--SGLGEVP--------ANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGDS 340 (412)
T ss_dssp EEEEECCSSCCC--TTCCCCC--------TTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred EEEEEECCCCCh--hhhccCC--------CcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCCchhH
Confidence 888888765311 1122344 44488999999999999888 99999999999999999999999999999
Q ss_pred hHHHHHHHhhhccceecCC-CCCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 012735 373 KVNARYVSDVWKVGLQLEN-GLKREEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILS 448 (457)
Q Consensus 373 ~~na~~v~~~lG~g~~l~~-~~~~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (457)
..|++++++. |.|..+.. .++++.|.++|.++++| +++++++.+.++++. +..+.++.++.+++.+.+
T Consensus 341 ~~~~~~v~~~-g~g~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 341 FANAQAVAQA-GAGDHLLPDNISPDSVSGAAKRLLAE---ESYRAGARAVAAEIA----AMPGPDEVVRLLPGFASR 409 (412)
T ss_dssp HHHHHHHHHH-TSEEECCGGGCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----HSCCHHHHHTTHHHHHC-
T ss_pred HHHHHHHHHc-CCEEecCcccCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHh----cCCCHHHHHHHHHHHhcc
Confidence 9999999995 99999987 78999999999999999 899999999999987 667888888888877643
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=1.2e-29 Score=242.02 Aligned_cols=339 Identities=14% Similarity=0.124 Sum_probs=202.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCC-CCCCCCCCeeEEecCC-CCCCCC--CCccCHHHHHHHHH
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNS-PNPSSHPHLTFHFIQE-NLSASE--ASTDDLVAFVSLLN 82 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~-~~~~~~~g~~~~~i~~-~~~~~~--~~~~~~~~~~~~~~ 82 (457)
+||++...|+.||++|.++||++|+++||+|+|+++.... .......|+.++.++. ++.... ........++..+.
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKSLF 82 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC--------------CHHHHHHHHH
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHHHH
Confidence 5899998888899999999999999999999999975321 1111125788888873 222111 00111112111111
Q ss_pred HhcchhHHHHHHHHhhccCCCCeeEEEeCCCc--chHHHHHhHcCCCeEEEecchHHHHHHHHhhhhhhhcCCCCCCCCC
Q 012735 83 TKCLVPFRDCLAKLLADVEEEPIACLISDAML--PFTQAVADSLKLPRIVLRTGGASSFVVFAAFPLLKERGYFPIQDSK 160 (457)
Q Consensus 83 ~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~--~~~~~~A~~l~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 160 (457)
....++++. +||+||++... ..+..+|..+|||++......
T Consensus 83 -----~~~~~l~~~-------~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n~------------------------- 125 (365)
T 3s2u_A 83 -----QALRVIRQL-------RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNA------------------------- 125 (365)
T ss_dssp -----HHHHHHHHH-------CCSEEEECSSSTHHHHHHHHHHTTCCEEEEECSS-------------------------
T ss_pred -----HHHHHHHhc-------CCCEEEEcCCcchHHHHHHHHHcCCCEEEEecch-------------------------
Confidence 111233333 99999998655 345678999999998743210
Q ss_pred CCccccCCCCCCCCCCCCCCCCCChhHHHHHHhhhhccccccEEEEcCchhhhHHHHHHHHhhcCCCccccCccccCCCC
Q 012735 161 GQEPVVELPPLKIKDLPVINTRDPETLYEIVNGMVDGAKVSSGIIWNTFEDLEESALATLRQQFSIPIFPIGPFHICIPA 240 (457)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~p~~~vGp~~~~~~~ 240 (457)
.++ ...+++. +.++.++. ++++..+. .....++|........
T Consensus 126 ----~~G------------------~~nr~l~------~~a~~v~~-~~~~~~~~---------~~k~~~~g~pvr~~~~ 167 (365)
T 3s2u_A 126 ----VAG------------------TANRSLA------PIARRVCE-AFPDTFPA---------SDKRLTTGNPVRGELF 167 (365)
T ss_dssp ----SCC------------------HHHHHHG------GGCSEEEE-SSTTSSCC------------CEECCCCCCGGGC
T ss_pred ----hhh------------------hHHHhhc------cccceeee-cccccccC---------cCcEEEECCCCchhhc
Confidence 000 0011111 12233222 33321110 1226667755433211
Q ss_pred CCCCCccCccccccccCCCCCCcEEEEEecccccCCHHHHHHHHHHHhhCC----CCeEEEECCCCCCCCCCCCCCchhH
Q 012735 241 SPSSLLTQDQSCIAWLDKQAPKSVIYVSFGSIAAVSEAEFLEIAWGLANCK----LPFLWVVRPGLTRGSDCLEPLPSGF 316 (457)
Q Consensus 241 ~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~----~~~i~~~~~~~~~~~~~~~~lp~~~ 316 (457)
... .......+++++|++..||.+. ....+.+.+++.... ..+++.++... .+..
T Consensus 168 -----~~~----~~~~~~~~~~~~ilv~gGs~g~--~~~~~~~~~al~~l~~~~~~~vi~~~G~~~----------~~~~ 226 (365)
T 3s2u_A 168 -----LDA----HARAPLTGRRVNLLVLGGSLGA--EPLNKLLPEALAQVPLEIRPAIRHQAGRQH----------AEIT 226 (365)
T ss_dssp -----CCT----TSSCCCTTSCCEEEECCTTTTC--SHHHHHHHHHHHTSCTTTCCEEEEECCTTT----------HHHH
T ss_pred -----cch----hhhcccCCCCcEEEEECCcCCc--cccchhhHHHHHhcccccceEEEEecCccc----------cccc
Confidence 000 1111223456789999999875 344455667776542 34555554321 1222
Q ss_pred H---HhhcCCCccccccChH-hhhcCCCCCCcccccChhHHHHHHhhCCcccccCcc----chhhHHHHHHHhhhcccee
Q 012735 317 M---EMVDGRGHLVKWAPQQ-EVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCF----TDQKVNARYVSDVWKVGLQ 388 (457)
Q Consensus 317 ~---~~~~~~~~~~~~vpq~-~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~----~DQ~~na~~v~~~lG~g~~ 388 (457)
. +..+.++.+.+|+++. ++|+.+|+ +|||+|.+|+.|++++|+|+|++|+. .+|..||+.+++. |+|+.
T Consensus 227 ~~~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~-G~a~~ 303 (365)
T 3s2u_A 227 AERYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRS-GAGRL 303 (365)
T ss_dssp HHHHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTT-TSEEE
T ss_pred cceecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHC-CCEEE
Confidence 2 2344677888999975 69999998 99999999999999999999999974 6899999999995 99999
Q ss_pred cCC-CCCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhccc
Q 012735 389 LEN-GLKREEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILSLET 451 (457)
Q Consensus 389 l~~-~~~~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (457)
++. .++++.|.++|.++++| ++.+++..+-+.++. ..++.++.++.+++..+...+
T Consensus 304 l~~~~~~~~~L~~~i~~ll~d---~~~~~~m~~~a~~~~----~~~aa~~ia~~i~~larG~e~ 360 (365)
T 3s2u_A 304 LPQKSTGAAELAAQLSEVLMH---PETLRSMADQARSLA----KPEATRTVVDACLEVARGLEH 360 (365)
T ss_dssp CCTTTCCHHHHHHHHHHHHHC---THHHHHHHHHHHHTC----CTTHHHHHHHHHHHHC-----
T ss_pred eecCCCCHHHHHHHHHHHHCC---HHHHHHHHHHHHhcC----CccHHHHHHHHHHHHHccchh
Confidence 987 88999999999999999 443332222222222 344556666666665555444
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=1.2e-27 Score=203.16 Aligned_cols=160 Identities=25% Similarity=0.441 Sum_probs=136.0
Q ss_pred ccccccccCCCCCCcEEEEEeccccc-CCHHHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCCCCchhHHHhhcCCCccc
Q 012735 249 DQSCIAWLDKQAPKSVIYVSFGSIAA-VSEAEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLV 327 (457)
Q Consensus 249 ~~~l~~~l~~~~~~~vv~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~ 327 (457)
.+++.+|++..+++++||+++||... .+.+.+..+++++++.+.+++|+.++.. ...++ +|+++.
T Consensus 8 ~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~------~~~~~--------~~v~~~ 73 (170)
T 2o6l_A 8 PKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK------PDTLG--------LNTRLY 73 (170)
T ss_dssp CHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC------CTTCC--------TTEEEE
T ss_pred CHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC------cccCC--------CcEEEe
Confidence 34588999876677899999999974 5778889999999988889999886542 12233 445899
Q ss_pred cccChHhhhcCCCCCCcccccChhHHHHHHhhCCcccccCccchhhHHHHHHHhhhccceecCC-CCCHHHHHHHHHHHh
Q 012735 328 KWAPQQEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVGLQLEN-GLKREEIEKTIRRVM 406 (457)
Q Consensus 328 ~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~-~~~~~~l~~ai~~il 406 (457)
+|+||.++|.|+.+++||||||+||+.||+++|+|+|++|...||..||+++++ .|+|+.++. .++++.|.++|.+++
T Consensus 74 ~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ll 152 (170)
T 2o6l_A 74 KWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDFNTMSSTDLLNALKRVI 152 (170)
T ss_dssp SSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCTTTCCHHHHHHHHHHHH
T ss_pred cCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEeccccCCHHHHHHHHHHHH
Confidence 999999999666666699999999999999999999999999999999999999 599999987 789999999999999
Q ss_pred cccchHHHHHHHHHHHHHHH
Q 012735 407 VEKQGEEIRSRIFRLKEKAN 426 (457)
Q Consensus 407 ~~~~~~~~~~~a~~l~~~~~ 426 (457)
+| ++|+++++++++.++
T Consensus 153 ~~---~~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 153 ND---PSYKENVMKLSRIQH 169 (170)
T ss_dssp HC---HHHHHHHHHHC----
T ss_pred cC---HHHHHHHHHHHHHhh
Confidence 99 899999999999876
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.87 E-value=5.2e-21 Score=182.88 Aligned_cols=340 Identities=15% Similarity=0.110 Sum_probs=205.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCC-CCCCCCCeeEEecCCCCCCCCCCccCHHHHHHHHHHh
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSP-NPSSHPHLTFHFIQENLSASEASTDDLVAFVSLLNTK 84 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~-~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 84 (457)
+|||++++.+..||..+++.|+++|.++||+|++++...... ......|+.++.++..-... ......+......
T Consensus 6 ~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~ 81 (364)
T 1f0k_A 6 GKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRG----KGIKALIAAPLRI 81 (364)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGGTCEEEECCCCCCTT----CCHHHHHTCHHHH
T ss_pred CcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccccCCceEEecCCccCc----CccHHHHHHHHHH
Confidence 489999998777999999999999999999999999853211 01111477777766321101 1111111101110
Q ss_pred cchhHHHHHHHHhhccCCCCeeEEEeCCCc--chHHHHHhHcCCCeEEEecchHHHHHHHHhhhhhhhcCCCCCCCCCCC
Q 012735 85 CLVPFRDCLAKLLADVEEEPIACLISDAML--PFTQAVADSLKLPRIVLRTGGASSFVVFAAFPLLKERGYFPIQDSKGQ 162 (457)
Q Consensus 85 ~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~--~~~~~~A~~l~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 162 (457)
. ..+.. +.++++.. +||+|+++... ..+..++..+++|+|....... +
T Consensus 82 ~-~~~~~-l~~~l~~~---~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~------------------~------- 131 (364)
T 1f0k_A 82 F-NAWRQ-ARAIMKAY---KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI------------------A------- 131 (364)
T ss_dssp H-HHHHH-HHHHHHHH---CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS------------------C-------
T ss_pred H-HHHHH-HHHHHHhc---CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC------------------C-------
Confidence 0 01112 22222222 99999998643 3456788889999986533210 0
Q ss_pred ccccCCCCCCCCCCCCCCCCCChhHHHHHHhhhhccccccEEEEcCchhhhHHHHHHHHhhcCCCccccCccccCCCCCC
Q 012735 163 EPVVELPPLKIKDLPVINTRDPETLYEIVNGMVDGAKVSSGIIWNTFEDLEESALATLRQQFSIPIFPIGPFHICIPASP 242 (457)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~p~~~vGp~~~~~~~~~ 242 (457)
. ...++ ....++.++..+... ++ ++..+|.......
T Consensus 132 -------------------~---~~~~~------~~~~~d~v~~~~~~~------------~~-~~~~i~n~v~~~~--- 167 (364)
T 1f0k_A 132 -------------------G---LTNKW------LAKIATKVMQAFPGA------------FP-NAEVVGNPVRTDV--- 167 (364)
T ss_dssp -------------------C---HHHHH------HTTTCSEEEESSTTS------------SS-SCEECCCCCCHHH---
T ss_pred -------------------c---HHHHH------HHHhCCEEEecChhh------------cC-CceEeCCccchhh---
Confidence 0 00111 112344444433211 12 3444443221100
Q ss_pred CCCccCccccccccCCCCCCcEEEEEecccccCCHHHHHHHHHHHhhC--CCCeEEEECCCCCCCCCCCCCCchhHHHh-
Q 012735 243 SSLLTQDQSCIAWLDKQAPKSVIYVSFGSIAAVSEAEFLEIAWGLANC--KLPFLWVVRPGLTRGSDCLEPLPSGFMEM- 319 (457)
Q Consensus 243 ~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~lp~~~~~~- 319 (457)
..... ....+...+++++|++..|+.. +.+....++++++.. +.++++.++.+. .+.+.+.
T Consensus 168 ---~~~~~-~~~~~~~~~~~~~il~~~g~~~--~~k~~~~li~a~~~l~~~~~~l~i~G~~~----------~~~l~~~~ 231 (364)
T 1f0k_A 168 ---LALPL-PQQRLAGREGPVRVLVVGGSQG--ARILNQTMPQVAAKLGDSVTIWHQSGKGS----------QQSVEQAY 231 (364)
T ss_dssp ---HTSCC-HHHHHTTCCSSEEEEEECTTTC--CHHHHHHHHHHHHHHGGGEEEEEECCTTC----------HHHHHHHH
T ss_pred ---cccch-hhhhcccCCCCcEEEEEcCchH--hHHHHHHHHHHHHHhcCCcEEEEEcCCch----------HHHHHHHH
Confidence 00000 0111222234567888888876 455566666777654 345555555432 1233222
Q ss_pred --hc-CCCccccccCh-HhhhcCCCCCCcccccChhHHHHHHhhCCcccccCcc---chhhHHHHHHHhhhccceecCC-
Q 012735 320 --VD-GRGHLVKWAPQ-QEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCF---TDQKVNARYVSDVWKVGLQLEN- 391 (457)
Q Consensus 320 --~~-~~~~~~~~vpq-~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~---~DQ~~na~~v~~~lG~g~~l~~- 391 (457)
.. +|+.+.+|+++ .++|+.+++ +|+++|.+++.||+.+|+|+|+.|.. .||..|++.+.+. |.|..++.
T Consensus 232 ~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g~~~~~~ 308 (364)
T 1f0k_A 232 AEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAKIIEQP 308 (364)
T ss_dssp HHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEEECCGG
T ss_pred hhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcEEEeccc
Confidence 22 47788899954 679988998 99999999999999999999999987 7999999999995 99998887
Q ss_pred CCCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhccc
Q 012735 392 GLKREEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILSLET 451 (457)
Q Consensus 392 ~~~~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (457)
+.+++.++++|.++ | +..+++..+-+.+.. +..+.++.++.+++.+++...
T Consensus 309 d~~~~~la~~i~~l--~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~y~~~~~ 359 (364)
T 1f0k_A 309 QLSVDAVANTLAGW--S---RETLLTMAERARAAS----IPDATERVANEVSRVARALEH 359 (364)
T ss_dssp GCCHHHHHHHHHTC--C---HHHHHHHHHHHHHTC----CTTHHHHHHHHHHHHHTTC--
T ss_pred cCCHHHHHHHHHhc--C---HHHHHHHHHHHHHhh----ccCHHHHHHHHHHHHHHHHHh
Confidence 67799999999998 6 455555444444433 456788888888888877653
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.64 E-value=2.5e-15 Score=135.93 Aligned_cols=116 Identities=10% Similarity=0.080 Sum_probs=89.4
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCCCCchhHHHhh--cCCCccccccChH-hhhc
Q 012735 261 PKSVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLEPLPSGFMEMV--DGRGHLVKWAPQQ-EVLA 337 (457)
Q Consensus 261 ~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~--~~~~~~~~~vpq~-~lL~ 337 (457)
+.+.|+|++|.... ......+++++.... ++.++.+... ...+.+.+.. ..|+.+..|+++. ++++
T Consensus 156 ~~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~~--------~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~ 224 (282)
T 3hbm_A 156 KKYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSSN--------PNLKKLQKFAKLHNNIRLFIDHENIAKLMN 224 (282)
T ss_dssp CCEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTTC--------TTHHHHHHHHHTCSSEEEEESCSCHHHHHH
T ss_pred cCCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCCc--------hHHHHHHHHHhhCCCEEEEeCHHHHHHHHH
Confidence 35679999997653 345667888887644 5666665432 1334443332 2477888999976 6998
Q ss_pred CCCCCCcccccChhHHHHHHhhCCcccccCccchhhHHHHHHHhhhccceecCC
Q 012735 338 HPAVGAFWTHNGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVGLQLEN 391 (457)
Q Consensus 338 ~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~ 391 (457)
.+++ +|++|| +|++|+++.|+|+|++|...+|..||+.+++. |++..+..
T Consensus 225 ~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 225 ESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp TEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred HCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 9999 999999 89999999999999999999999999999994 99998865
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.63 E-value=5.7e-16 Score=134.25 Aligned_cols=132 Identities=11% Similarity=0.060 Sum_probs=96.1
Q ss_pred CCCcEEEEEecccccCCHHHHHHH-----HHHHhhCC-CCeEEEECCCCCCCCCCCCCCchhHHHhh---------c---
Q 012735 260 APKSVIYVSFGSIAAVSEAEFLEI-----AWGLANCK-LPFLWVVRPGLTRGSDCLEPLPSGFMEMV---------D--- 321 (457)
Q Consensus 260 ~~~~vv~vs~Gs~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~~~~lp~~~~~~~---------~--- 321 (457)
.++++|||+.||... -...+..+ ++++...+ .+++++++..... ..+.+.+.. +
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~-------~~~~~~~~~~~~~~~~l~p~~~ 97 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSS-------EFEHLVQERGGQRESQKIPIDQ 97 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCC-------CCCSHHHHHTCEECSCCCSSCT
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchh-------hHHHHHHhhhcccccccccccc
Confidence 456889999999843 24444444 48887777 6888888765310 111111110 0
Q ss_pred --------------C--CCccccccChH-hhhc-CCCCCCcccccChhHHHHHHhhCCcccccCcc----chhhHHHHHH
Q 012735 322 --------------G--RGHLVKWAPQQ-EVLA-HPAVGAFWTHNGWNSTLESICEGIPMICMPCF----TDQKVNARYV 379 (457)
Q Consensus 322 --------------~--~~~~~~~vpq~-~lL~-~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~----~DQ~~na~~v 379 (457)
. ++.+.+|+++. ++|+ .+++ +|||||+||++|++++|+|+|++|.. .||..||+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l 175 (224)
T 2jzc_A 98 FGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKF 175 (224)
T ss_dssp TCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHH
T ss_pred ccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHH
Confidence 1 23456888875 7998 8888 99999999999999999999999984 4799999999
Q ss_pred HhhhccceecCCCCCHHHHHHHHHHHh
Q 012735 380 SDVWKVGLQLENGLKREEIEKTIRRVM 406 (457)
Q Consensus 380 ~~~lG~g~~l~~~~~~~~l~~ai~~il 406 (457)
++ .|+++.+ +++.|.++|+++.
T Consensus 176 ~~-~G~~~~~----~~~~L~~~i~~l~ 197 (224)
T 2jzc_A 176 VE-LGYVWSC----APTETGLIAGLRA 197 (224)
T ss_dssp HH-HSCCCEE----CSCTTTHHHHHHH
T ss_pred HH-CCCEEEc----CHHHHHHHHHHHH
Confidence 99 5998765 5677788887773
No 25
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.46 E-value=9.9e-12 Score=120.01 Aligned_cols=341 Identities=9% Similarity=0.043 Sum_probs=179.7
Q ss_pred CCCCCcEEEEEcCC---C-ccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCC---CCeeEEecCCCCCCCCCCccCH
Q 012735 2 DQRKGRRLVLFPLP---L-QGHISPMLQLANILHSQGFTITIIHTSFNSPNPSSH---PHLTFHFIQENLSASEASTDDL 74 (457)
Q Consensus 2 ~~~~~~~il~~~~~---~-~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~---~g~~~~~i~~~~~~~~~~~~~~ 74 (457)
+..++|||+++... . .|.-.-...+++.|.++||+|++++........... .+ .++.++.. ...
T Consensus 16 ~~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~~~--------~~~ 86 (406)
T 2gek_A 16 PRGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGG-KAVPIPYN--------GSV 86 (406)
T ss_dssp -----CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEEECC-CCC----------------
T ss_pred cCCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccccCC-cEEecccc--------CCc
Confidence 44568999999842 2 466688999999999999999999986332211110 01 11111100 000
Q ss_pred HHHHHHHHHhcchhHHHHHHHHhhccCCCCeeEEEeCCCc--chHHHHHhHcCCCeEEEecchHHHHHHHHhhhhhhhcC
Q 012735 75 VAFVSLLNTKCLVPFRDCLAKLLADVEEEPIACLISDAML--PFTQAVADSLKLPRIVLRTGGASSFVVFAAFPLLKERG 152 (457)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~--~~~~~~A~~l~iP~v~~~~~~~~~~~~~~~~~~~~~~~ 152 (457)
.. ..........+.++++.. +||+|++.... ..+..++...++|+|........
T Consensus 87 ~~------~~~~~~~~~~l~~~l~~~---~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~--------------- 142 (406)
T 2gek_A 87 AR------LRFGPATHRKVKKWIAEG---DFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTT--------------- 142 (406)
T ss_dssp ----------CCHHHHHHHHHHHHHH---CCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCC---------------
T ss_pred cc------ccccHHHHHHHHHHHHhc---CCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcch---------------
Confidence 00 000000111222233222 89999977654 33556777789999986543100
Q ss_pred CCCCCCCCCCccccCCCCCCCCCCCCCCCCCChhHHHHHHhhh-hccccccEEEEcCchhhhHHHHHHHHhhcCCC-ccc
Q 012735 153 YFPIQDSKGQEPVVELPPLKIKDLPVINTRDPETLYEIVNGMV-DGAKVSSGIIWNTFEDLEESALATLRQQFSIP-IFP 230 (457)
Q Consensus 153 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~p-~~~ 230 (457)
.....+.+.... .....++.++..+....+.- .+.++.. + .
T Consensus 143 -------------------------------~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~-----~~~~~~~~~-v 185 (406)
T 2gek_A 143 -------------------------------KSLTLSVFQGILRPYHEKIIGRIAVSDLARRWQ-----MEALGSDAV-E 185 (406)
T ss_dssp -------------------------------SHHHHHHHHSTTHHHHTTCSEEEESSHHHHHHH-----HHHHSSCEE-E
T ss_pred -------------------------------hhhhHHHHHHHHHHHHhhCCEEEECCHHHHHHH-----HHhcCCCcE-E
Confidence 001111222222 23467787777775443321 2223333 3 3
Q ss_pred cCccccCCCCCCCCCccCccccccccCCCCCCcEEEEEeccc-ccCCHHHHHHHHHHHhh---CCCCe-EEEECCCCCCC
Q 012735 231 IGPFHICIPASPSSLLTQDQSCIAWLDKQAPKSVIYVSFGSI-AAVSEAEFLEIAWGLAN---CKLPF-LWVVRPGLTRG 305 (457)
Q Consensus 231 vGp~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~-~~~~~~~~~~~~~al~~---~~~~~-i~~~~~~~~~~ 305 (457)
+....... .......-.. + +++..+++..|+. .. .+....+++++.. ...++ ++.++.+.
T Consensus 186 i~~~v~~~------~~~~~~~~~~-~---~~~~~~i~~~G~~~~~--~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~--- 250 (406)
T 2gek_A 186 IPNGVDVA------SFADAPLLDG-Y---PREGRTVLFLGRYDEP--RKGMAVLLAALPKLVARFPDVEILIVGRGD--- 250 (406)
T ss_dssp CCCCBCHH------HHHTCCCCTT-C---SCSSCEEEEESCTTSG--GGCHHHHHHHHHHHHTTSTTCEEEEESCSC---
T ss_pred ecCCCChh------hcCCCchhhh-c---cCCCeEEEEEeeeCcc--ccCHHHHHHHHHHHHHHCCCeEEEEEcCCc---
Confidence 33222110 0000000000 0 1122466677887 43 2333444444443 22233 33444331
Q ss_pred CCCCCCCchhHHHhh---cCCCccccccChH---hhhcCCCCCCcccc----cC-hhHHHHHHhhCCcccccCccchhhH
Q 012735 306 SDCLEPLPSGFMEMV---DGRGHLVKWAPQQ---EVLAHPAVGAFWTH----NG-WNSTLESICEGIPMICMPCFTDQKV 374 (457)
Q Consensus 306 ~~~~~~lp~~~~~~~---~~~~~~~~~vpq~---~lL~~~~~~~~I~h----gG-~~s~~eal~~gvP~v~~P~~~DQ~~ 374 (457)
. +.+.+.. .+|+.+.+++|+. .+|..+++ +|.- .| .+++.||+.+|+|+|+.+. ..
T Consensus 251 ------~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~ 317 (406)
T 2gek_A 251 ------E-DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DA 317 (406)
T ss_dssp ------H-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HH
T ss_pred ------H-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----Cc
Confidence 1 3333222 4567888999964 68888888 6633 34 3599999999999998866 45
Q ss_pred HHHHHHhhhccceecCCCCCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 012735 375 NARYVSDVWKVGLQLENGLKREEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILSL 449 (457)
Q Consensus 375 na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (457)
....+.+. +.|...+. -+.+++.++|.++++| +..+++..+-+.+. .. ..+.++.++.+++.+++.
T Consensus 318 ~~e~i~~~-~~g~~~~~-~d~~~l~~~i~~l~~~---~~~~~~~~~~~~~~---~~-~~s~~~~~~~~~~~~~~~ 383 (406)
T 2gek_A 318 FRRVLADG-DAGRLVPV-DDADGMAAALIGILED---DQLRAGYVARASER---VH-RYDWSVVSAQIMRVYETV 383 (406)
T ss_dssp HHHHHTTT-TSSEECCT-TCHHHHHHHHHHHHHC---HHHHHHHHHHHHHH---GG-GGBHHHHHHHHHHHHHHH
T ss_pred HHHHhcCC-CceEEeCC-CCHHHHHHHHHHHHcC---HHHHHHHHHHHHHH---HH-hCCHHHHHHHHHHHHHHH
Confidence 66777763 67877765 5899999999999998 44333322222222 22 456788888888877654
No 26
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.46 E-value=3e-11 Score=117.93 Aligned_cols=368 Identities=12% Similarity=0.062 Sum_probs=188.1
Q ss_pred CCCCcEEEEEcC-----------CCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCC---CCCCCeeEEecCCCCCCCC
Q 012735 3 QRKGRRLVLFPL-----------PLQGHISPMLQLANILHSQGFTITIIHTSFNSPNP---SSHPHLTFHFIQENLSASE 68 (457)
Q Consensus 3 ~~~~~~il~~~~-----------~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~---~~~~g~~~~~i~~~~~~~~ 68 (457)
.+++|||++++. ...|+-.....+++.|.++||+|++++........ ....++.++.++.......
T Consensus 17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~ 96 (438)
T 3c48_A 17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGL 96 (438)
T ss_dssp --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSSSC
T ss_pred CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCCeEEEEecCCCcccc
Confidence 356799999985 23588888999999999999999999975321111 1114677777663211110
Q ss_pred CCccCHHHHHHHHHHhcchhHHHHHHHHhhccCCCCeeEEEeCCCc--chHHHHHhHcCCCeEEEecchHHHHHHHHhhh
Q 012735 69 ASTDDLVAFVSLLNTKCLVPFRDCLAKLLADVEEEPIACLISDAML--PFTQAVADSLKLPRIVLRTGGASSFVVFAAFP 146 (457)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~--~~~~~~A~~l~iP~v~~~~~~~~~~~~~~~~~ 146 (457)
...+....+..+ ...++...++... +||+|++.... ..+..++..+++|+|..........
T Consensus 97 -~~~~~~~~~~~~-------~~~~~~~~~~~~~--~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~------- 159 (438)
T 3c48_A 97 -SKEELPTQLAAF-------TGGMLSFTRREKV--TYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK------- 159 (438)
T ss_dssp -CGGGGGGGHHHH-------HHHHHHHHHHHTC--CCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH-------
T ss_pred -chhHHHHHHHHH-------HHHHHHHHHhccC--CCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc-------
Confidence 011111111111 1112222122211 59999987532 2344577788999988765532210
Q ss_pred hhhhcCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCChhHHHHHHhhhhccccccEEEEcCchhhhHHHHHHHHhhcCC
Q 012735 147 LLKERGYFPIQDSKGQEPVVELPPLKIKDLPVINTRDPETLYEIVNGMVDGAKVSSGIIWNTFEDLEESALATLRQQFSI 226 (457)
Q Consensus 147 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~ 226 (457)
..... ... .......... ....+..++.++..+....+.- .+.+..
T Consensus 160 ----~~~~~-----------------~~~------~~~~~~~~~~--~~~~~~~~d~ii~~s~~~~~~~-----~~~~g~ 205 (438)
T 3c48_A 160 ----NSYRD-----------------DSD------TPESEARRIC--EQQLVDNADVLAVNTQEEMQDL-----MHHYDA 205 (438)
T ss_dssp ----SCC---------------------C------CHHHHHHHHH--HHHHHHHCSEEEESSHHHHHHH-----HHHHCC
T ss_pred ----ccccc-----------------ccC------CcchHHHHHH--HHHHHhcCCEEEEcCHHHHHHH-----HHHhCC
Confidence 00000 000 0000011111 1122456788888776544321 222222
Q ss_pred C---ccccCccccCCCCCCCCCccCc--cccccccCCCCCCcEEEEEecccccCCHHHHHHHHHHHhhC-----CCCe-E
Q 012735 227 P---IFPIGPFHICIPASPSSLLTQD--QSCIAWLDKQAPKSVIYVSFGSIAAVSEAEFLEIAWGLANC-----KLPF-L 295 (457)
Q Consensus 227 p---~~~vGp~~~~~~~~~~~~~~~~--~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~-i 295 (457)
+ +..+..-.....- ...+.. ..+..-+... ++..+++..|+... .+....+++++... +..+ +
T Consensus 206 ~~~k~~vi~ngvd~~~~---~~~~~~~~~~~r~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~p~~~~~l 279 (438)
T 3c48_A 206 DPDRISVVSPGADVELY---SPGNDRATERSRRELGIP-LHTKVVAFVGRLQP--FKGPQVLIKAVAALFDRDPDRNLRV 279 (438)
T ss_dssp CGGGEEECCCCCCTTTS---CCC----CHHHHHHTTCC-SSSEEEEEESCBSG--GGCHHHHHHHHHHHHHHCTTCSEEE
T ss_pred ChhheEEecCCcccccc---CCcccchhhhhHHhcCCC-CCCcEEEEEeeecc--cCCHHHHHHHHHHHHhhCCCcceEE
Confidence 2 3334322211110 000000 0022222211 23456677788764 23334444444332 1233 3
Q ss_pred EEECCCCCCCCCCCCCCchhHHHh-----hcCCCccccccChH---hhhcCCCCCCcccc----cChhHHHHHHhhCCcc
Q 012735 296 WVVRPGLTRGSDCLEPLPSGFMEM-----VDGRGHLVKWAPQQ---EVLAHPAVGAFWTH----NGWNSTLESICEGIPM 363 (457)
Q Consensus 296 ~~~~~~~~~~~~~~~~lp~~~~~~-----~~~~~~~~~~vpq~---~lL~~~~~~~~I~h----gG~~s~~eal~~gvP~ 363 (457)
+.++.....+ ...+.+.+. ..+|+.+.+++|+. .+|+.+++ +|.- |..+++.||+.+|+|+
T Consensus 280 ~i~G~~~~~g-----~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~Pv 352 (438)
T 3c48_A 280 IICGGPSGPN-----ATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPV 352 (438)
T ss_dssp EEECCBC-----------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCE
T ss_pred EEEeCCCCCC-----cHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCE
Confidence 3343311000 112222222 23577888999864 57888888 7654 3356899999999999
Q ss_pred cccCccchhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHhcccc-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 012735 364 ICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVMVEKQ-GEEIRSRIFRLKEKANHSWKQGRSSFESINSL 442 (457)
Q Consensus 364 v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~~~~-~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~ 442 (457)
|+.+. ......+.+. +.|..++. -++++++++|.++++|.+ +..+.+++++..+++. .+..++.+
T Consensus 353 I~~~~----~~~~e~i~~~-~~g~~~~~-~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s--------~~~~~~~~ 418 (438)
T 3c48_A 353 IAARV----GGLPIAVAEG-ETGLLVDG-HSPHAWADALATLLDDDETRIRMGEDAVEHARTFS--------WAATAAQL 418 (438)
T ss_dssp EEESC----TTHHHHSCBT-TTEEEESS-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH--------HHHHHHHH
T ss_pred EecCC----CChhHHhhCC-CcEEECCC-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCC--------HHHHHHHH
Confidence 98764 3455666663 67887765 589999999999999832 3445556665555543 56666666
Q ss_pred HHHHHh
Q 012735 443 VTHILS 448 (457)
Q Consensus 443 ~~~~~~ 448 (457)
++.+++
T Consensus 419 ~~~~~~ 424 (438)
T 3c48_A 419 SSLYND 424 (438)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666554
No 27
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.42 E-value=1.3e-10 Score=113.31 Aligned_cols=382 Identities=13% Similarity=0.036 Sum_probs=193.4
Q ss_pred CCcEEEEEcCC-----CccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCC-------------------CCCCeeEEec
Q 012735 5 KGRRLVLFPLP-----LQGHISPMLQLANILHSQGFTITIIHTSFNSPNPS-------------------SHPHLTFHFI 60 (457)
Q Consensus 5 ~~~~il~~~~~-----~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~-------------------~~~g~~~~~i 60 (457)
++|||++++.. ..|--.-+..||++|+++||+|+++++........ ...|+.++.+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 47899998833 34555668999999999999999999753322110 2256777666
Q ss_pred CCCCCCCCCCccCHHHH-HHHHHHhcchhHHHHHHHHhhccCCCCeeEEEeCCCc--chHHHHHhHcCCCeEEEecchHH
Q 012735 61 QENLSASEASTDDLVAF-VSLLNTKCLVPFRDCLAKLLADVEEEPIACLISDAML--PFTQAVADSLKLPRIVLRTGGAS 137 (457)
Q Consensus 61 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~--~~~~~~A~~l~iP~v~~~~~~~~ 137 (457)
+................ ...+.... ..+...+..+.... . +||+|.+.... ..+..++...++|+|........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~-~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~ 157 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAVTFG-RASVLLLNDLLREE-P-LPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNK 157 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHHHHH-HHHHHHHHHHTTTS-C-CCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCC
T ss_pred cchhccccccccCCcchhhhhhHHHH-HHHHHHHHHHhccC-C-CCeEEEecchhhhhhHHHHhhccCCCEEEEeccccc
Confidence 64111111111111111 22121111 12223344442211 1 99999987543 33456777889999987654211
Q ss_pred HHHHHHhhhh-hhhcCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCChhHHHHHHhhhhccccccEEEEcCchhhhHHH
Q 012735 138 SFVVFAAFPL-LKERGYFPIQDSKGQEPVVELPPLKIKDLPVINTRDPETLYEIVNGMVDGAKVSSGIIWNTFEDLEESA 216 (457)
Q Consensus 138 ~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~ 216 (457)
.. .+. ..... .+. .... .......+ ..+..++.++..+....+. .
T Consensus 158 ~~-----~~~~~~~~~-----------------~~~--~~~~---~~~~~~~~------~~~~~ad~ii~~S~~~~~~-~ 203 (439)
T 3fro_A 158 SK-----LPAFYFHEA-----------------GLS--ELAP---YPDIDPEH------TGGYIADIVTTVSRGYLID-E 203 (439)
T ss_dssp CC-----EEHHHHHHT-----------------TCG--GGCC---SSEECHHH------HHHHHCSEEEESCHHHHHH-T
T ss_pred cc-----CchHHhCcc-----------------ccc--cccc---cceeeHhh------hhhhhccEEEecCHHHHHH-H
Confidence 00 000 00000 000 0000 00001111 1134567777777654433 1
Q ss_pred HHHHHhhcCCCccccCccccCCCCCCCCCcc-----CccccccccCCCCCCcEEEEEecccc-c-CCHHHHHHHHHHHhh
Q 012735 217 LATLRQQFSIPIFPIGPFHICIPASPSSLLT-----QDQSCIAWLDKQAPKSVIYVSFGSIA-A-VSEAEFLEIAWGLAN 289 (457)
Q Consensus 217 ~~~~~~~~~~p~~~vGp~~~~~~~~~~~~~~-----~~~~l~~~l~~~~~~~vv~vs~Gs~~-~-~~~~~~~~~~~al~~ 289 (457)
...+.. ...++..+..-.....- .....+ ...++.+-+.-. ++ .+++..|+.. . ...+.+-+.+..+..
T Consensus 204 ~~~~~~-~~~~i~vi~ngvd~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~ 279 (439)
T 3fro_A 204 WGFFRN-FEGKITYVFNGIDCSFW-NESYLTGSRDERKKSLLSKFGMD-EG-VTFMFIGRFDRGQKGVDVLLKAIEILSS 279 (439)
T ss_dssp HHHHGG-GTTSEEECCCCCCTTTS-CGGGSCSCHHHHHHHHHHHHTCC-SC-EEEEEECCSSCTTBCHHHHHHHHHHHHT
T ss_pred hhhhhh-cCCceeecCCCCCchhc-CcccccchhhhhHHHHHHHcCCC-CC-cEEEEEcccccccccHHHHHHHHHHHHh
Confidence 111111 12333333221111100 000000 111222222222 33 6777788887 4 334444444444433
Q ss_pred CC--CCeEEEECCCCCCCCCCCCCCchhH---HHhhcCCCccccccChHh---hhcCCCCCCcccc----cChhHHHHHH
Q 012735 290 CK--LPFLWVVRPGLTRGSDCLEPLPSGF---MEMVDGRGHLVKWAPQQE---VLAHPAVGAFWTH----NGWNSTLESI 357 (457)
Q Consensus 290 ~~--~~~i~~~~~~~~~~~~~~~~lp~~~---~~~~~~~~~~~~~vpq~~---lL~~~~~~~~I~h----gG~~s~~eal 357 (457)
.. ..+-+.+.+.. .....+.+ .+..++++.+.+|+|+.+ +++.+++ +|.- |-.+++.||+
T Consensus 280 ~~~~~~~~l~i~G~g------~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAm 351 (439)
T 3fro_A 280 KKEFQEMRFIIIGKG------DPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAM 351 (439)
T ss_dssp SGGGGGEEEEEECCC------CHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHH
T ss_pred cccCCCeEEEEEcCC------ChhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHH
Confidence 22 23333333321 00000122 222333345568899754 7888887 6632 3357999999
Q ss_pred hhCCcccccCccchhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHhc-ccc-hHHHHHHHHHHHHHHHHHHhcCCCh
Q 012735 358 CEGIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVMV-EKQ-GEEIRSRIFRLKEKANHSWKQGRSS 435 (457)
Q Consensus 358 ~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~-~~~-~~~~~~~a~~l~~~~~~~~~~~~~~ 435 (457)
.+|+|+|+... ......+.. |.|..++. -++++++++|.++++ |.+ ...+.+++++..+. .+.
T Consensus 352 a~G~Pvi~s~~----~~~~e~~~~--~~g~~~~~-~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~--------~s~ 416 (439)
T 3fro_A 352 CLGAIPIASAV----GGLRDIITN--ETGILVKA-GDPGELANAILKALELSRSDLSKFRENCKKRAMS--------FSW 416 (439)
T ss_dssp HTTCEEEEESS----THHHHHCCT--TTCEEECT-TCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHT--------SCH
T ss_pred HCCCCeEEcCC----CCcceeEEc--CceEEeCC-CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhh--------CcH
Confidence 99999998754 344444443 78888776 589999999999998 632 45566666655533 558
Q ss_pred HHHHHHHHHHHHhcc
Q 012735 436 FESINSLVTHILSLE 450 (457)
Q Consensus 436 ~~~~~~~~~~~~~~~ 450 (457)
+..++.+++.+++.-
T Consensus 417 ~~~~~~~~~~~~~~~ 431 (439)
T 3fro_A 417 EKSAERYVKAYTGSI 431 (439)
T ss_dssp HHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHH
Confidence 888999988887753
No 28
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.35 E-value=6.3e-11 Score=113.81 Aligned_cols=345 Identities=11% Similarity=0.030 Sum_probs=186.5
Q ss_pred CCcEEEEEcC--C--CccCHHHHHHHHHHHHHCCCeEEEEeCCCCCC---CCCCCCCeeEEecCCCCCCCCCCccCHHHH
Q 012735 5 KGRRLVLFPL--P--LQGHISPMLQLANILHSQGFTITIIHTSFNSP---NPSSHPHLTFHFIQENLSASEASTDDLVAF 77 (457)
Q Consensus 5 ~~~~il~~~~--~--~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~---~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~ 77 (457)
++|||++++. + ..|.-..+..+++.| +||+|++++...... ......++.++.++..... ...
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--- 72 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVML-----PTP--- 72 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCC-----SCH---
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEccccccc-----cch---
Confidence 5788888874 3 358888899999999 799999999863221 1112256777777642210 001
Q ss_pred HHHHHHhcchhHHHHHHHHhhccCCCCeeEEEeCCCc--chHHHHHhHcCCCeEEEecchHHHHHHHHhhhhhhhcCCCC
Q 012735 78 VSLLNTKCLVPFRDCLAKLLADVEEEPIACLISDAML--PFTQAVADSLKLPRIVLRTGGASSFVVFAAFPLLKERGYFP 155 (457)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~--~~~~~~A~~l~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~p 155 (457)
. ....+.++++.. +||+|++.... .....++..+++|.+++........ .
T Consensus 73 ---------~-~~~~l~~~~~~~---~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~------------- 124 (394)
T 3okp_A 73 ---------T-TAHAMAEIIRER---EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVG--W------------- 124 (394)
T ss_dssp ---------H-HHHHHHHHHHHT---TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHH--H-------------
T ss_pred ---------h-hHHHHHHHHHhc---CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhh--h-------------
Confidence 0 111222333332 89999976543 3455668889999555333211100 0
Q ss_pred CCCCCCCccccCCCCCCCCCCCCCCCCCChhHHHHHHhhhhccccccEEEEcCchhhhHHHHHHHHhhcCC--CccccCc
Q 012735 156 IQDSKGQEPVVELPPLKIKDLPVINTRDPETLYEIVNGMVDGAKVSSGIIWNTFEDLEESALATLRQQFSI--PIFPIGP 233 (457)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~--p~~~vGp 233 (457)
.......... ......++.++..+....+.- .+.+.. ++..+..
T Consensus 125 --------------------------~~~~~~~~~~---~~~~~~~d~ii~~s~~~~~~~-----~~~~~~~~~~~vi~n 170 (394)
T 3okp_A 125 --------------------------SMLPGSRQSL---RKIGTEVDVLTYISQYTLRRF-----KSAFGSHPTFEHLPS 170 (394)
T ss_dssp --------------------------TTSHHHHHHH---HHHHHHCSEEEESCHHHHHHH-----HHHHCSSSEEEECCC
T ss_pred --------------------------hhcchhhHHH---HHHHHhCCEEEEcCHHHHHHH-----HHhcCCCCCeEEecC
Confidence 0000111111 112356677777776543322 222222 2444432
Q ss_pred cccCCCCCCCCCccCccccccccCCCCCCcEEEEEecccccCCHHHHHHHHHHHhh---CCCCe-EEEECCCCCCCCCCC
Q 012735 234 FHICIPASPSSLLTQDQSCIAWLDKQAPKSVIYVSFGSIAAVSEAEFLEIAWGLAN---CKLPF-LWVVRPGLTRGSDCL 309 (457)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~---~~~~~-i~~~~~~~~~~~~~~ 309 (457)
-.....- .........++.+.+... ++..+++..|+... .+.+..++++++. ....+ ++.++.+.
T Consensus 171 gv~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~------- 239 (394)
T 3okp_A 171 GVDVKRF-TPATPEDKSATRKKLGFT-DTTPVIACNSRLVP--RKGQDSLIKAMPQVIAARPDAQLLIVGSGR------- 239 (394)
T ss_dssp CBCTTTS-CCCCHHHHHHHHHHTTCC-TTCCEEEEESCSCG--GGCHHHHHHHHHHHHHHSTTCEEEEECCCT-------
T ss_pred CcCHHHc-CCCCchhhHHHHHhcCCC-cCceEEEEEecccc--ccCHHHHHHHHHHHHhhCCCeEEEEEcCch-------
Confidence 2211110 000000111222223222 23356777788754 2334444444433 22222 33343321
Q ss_pred CCCchhHH---HhhcCCCccccccChHh---hhcCCCCCCccc-----------ccChhHHHHHHhhCCcccccCccchh
Q 012735 310 EPLPSGFM---EMVDGRGHLVKWAPQQE---VLAHPAVGAFWT-----------HNGWNSTLESICEGIPMICMPCFTDQ 372 (457)
Q Consensus 310 ~~lp~~~~---~~~~~~~~~~~~vpq~~---lL~~~~~~~~I~-----------hgG~~s~~eal~~gvP~v~~P~~~DQ 372 (457)
..+.+. ....+++.+.+|+|+.+ +++.+++ +|. -|..+++.||+.+|+|+|+.+..
T Consensus 240 --~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~--- 312 (394)
T 3okp_A 240 --YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSG--- 312 (394)
T ss_dssp --THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSST---
T ss_pred --HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCC---
Confidence 222222 22246778889998654 7888888 776 55667999999999999997753
Q ss_pred hHHHHHHHhhhccceecCCCCCHHHHHHHHHHHhcccc-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcc
Q 012735 373 KVNARYVSDVWKVGLQLENGLKREEIEKTIRRVMVEKQ-GEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILSLE 450 (457)
Q Consensus 373 ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~~~~-~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (457)
.....+.+ |.|...+. -+++++.++|.++++|.+ ...+.+++++... +..+.+..++.+++.+++..
T Consensus 313 -~~~e~i~~--~~g~~~~~-~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~-------~~~s~~~~~~~~~~~~~~~~ 380 (394)
T 3okp_A 313 -GAPETVTP--ATGLVVEG-SDVDKLSELLIELLDDPIRRAAMGAAGRAHVE-------AEWSWEIMGERLTNILQSEP 380 (394)
T ss_dssp -TGGGGCCT--TTEEECCT-TCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-------HHTBHHHHHHHHHHHHHSCC
T ss_pred -ChHHHHhc--CCceEeCC-CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-------HhCCHHHHHHHHHHHHHHhc
Confidence 23333333 56776665 589999999999999832 2334444444332 33458889999999888764
No 29
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.31 E-value=1.6e-09 Score=104.09 Aligned_cols=348 Identities=12% Similarity=0.076 Sum_probs=179.1
Q ss_pred CcEEEEEcCCCc-cCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCCCCCccCHHHHHHHHHHh
Q 012735 6 GRRLVLFPLPLQ-GHISPMLQLANILHSQGFTITIIHTSFNSPNPSSHPHLTFHFIQENLSASEASTDDLVAFVSLLNTK 84 (457)
Q Consensus 6 ~~~il~~~~~~~-gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 84 (457)
+.++....+|.. |.-.-...++++|+++||+|++++............++.+..++.......... . .. +.
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~-~~-~~----- 86 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNKVYPNIYFHEVTVNQYSVFQYP-P-YD-LA----- 86 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC----CCCTTEEEECCCCC----CCSC-C-HH-HH-----
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcccccCCceEEEecccccccccccc-c-cc-HH-----
Confidence 456777777654 677788899999999999999999853222112235676666552110000000 0 00 00
Q ss_pred cchhHHHHHHHHhhccCCCCeeEEEeCCCcc--hHHHHHh-Hc--CCCeEEEecchHHHHHHHHhhhhhhhcCCCCCCCC
Q 012735 85 CLVPFRDCLAKLLADVEEEPIACLISDAMLP--FTQAVAD-SL--KLPRIVLRTGGASSFVVFAAFPLLKERGYFPIQDS 159 (457)
Q Consensus 85 ~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~~--~~~~~A~-~l--~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 159 (457)
....+.+.+.+. +||+|++..... ....++. .+ ++|+|......... . ...
T Consensus 87 ~~~~l~~~l~~~-------~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~-----~------~~~------ 142 (394)
T 2jjm_A 87 LASKMAEVAQRE-------NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT-----V------LGS------ 142 (394)
T ss_dssp HHHHHHHHHHHH-------TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH-----T------TTT------
T ss_pred HHHHHHHHHHHc-------CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc-----c------cCC------
Confidence 001122223332 899999874332 2233343 33 59988865542110 0 000
Q ss_pred CCCccccCCCCCCCCCCCCCCCCCChhHHHHHHhhhhccccccEEEEcCchhhhHHHHHHHHhhcCC--CccccCccccC
Q 012735 160 KGQEPVVELPPLKIKDLPVINTRDPETLYEIVNGMVDGAKVSSGIIWNTFEDLEESALATLRQQFSI--PIFPIGPFHIC 237 (457)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~--p~~~vGp~~~~ 237 (457)
. .......+. .+..++.++..+....+. +.+.+.. ++..+..-...
T Consensus 143 --------------~-------~~~~~~~~~------~~~~ad~ii~~s~~~~~~-----~~~~~~~~~~~~vi~ngv~~ 190 (394)
T 2jjm_A 143 --------------D-------PSLNNLIRF------GIEQSDVVTAVSHSLINE-----THELVKPNKDIQTVYNFIDE 190 (394)
T ss_dssp --------------C-------TTTHHHHHH------HHHHSSEEEESCHHHHHH-----HHHHTCCSSCEEECCCCCCT
T ss_pred --------------C-------HHHHHHHHH------HHhhCCEEEECCHHHHHH-----HHHhhCCcccEEEecCCccH
Confidence 0 001111111 234567777777544332 2333332 34444322211
Q ss_pred CCCCCCCCccCccccccccCCCCCCcEEEEEecccccCCHHHHHHHHHHHhh---C-CCCeEEEECCCCCCCCCCCCCCc
Q 012735 238 IPASPSSLLTQDQSCIAWLDKQAPKSVIYVSFGSIAAVSEAEFLEIAWGLAN---C-KLPFLWVVRPGLTRGSDCLEPLP 313 (457)
Q Consensus 238 ~~~~~~~~~~~~~~l~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~---~-~~~~i~~~~~~~~~~~~~~~~lp 313 (457)
..- ......++.+-+... +++.+++..|+... .+....++++++. . +. -++.++.+. ..
T Consensus 191 ~~~----~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~-~l~i~G~g~---------~~ 253 (394)
T 2jjm_A 191 RVY----FKRDMTQLKKEYGIS-ESEKILIHISNFRK--VKRVQDVVQAFAKIVTEVDA-KLLLVGDGP---------EF 253 (394)
T ss_dssp TTC----CCCCCHHHHHHTTCC----CEEEEECCCCG--GGTHHHHHHHHHHHHHSSCC-EEEEECCCT---------TH
T ss_pred Hhc----CCcchHHHHHHcCCC-CCCeEEEEeecccc--ccCHHHHHHHHHHHHhhCCC-EEEEECCch---------HH
Confidence 110 000111122222211 22345666787764 3334444555443 2 33 334444331 11
Q ss_pred hhHHHhh-----cCCCccccccCh-HhhhcCCCCCCcc----cccChhHHHHHHhhCCcccccCccchhhHHHHHHHhhh
Q 012735 314 SGFMEMV-----DGRGHLVKWAPQ-QEVLAHPAVGAFW----THNGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVW 383 (457)
Q Consensus 314 ~~~~~~~-----~~~~~~~~~vpq-~~lL~~~~~~~~I----~hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~l 383 (457)
+.+.+.. .+|+.+.++..+ ..+|+.+++ +| .-|..+++.||+.+|+|+|+.+.. ...+.+.+.
T Consensus 254 ~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v~~~- 326 (394)
T 2jjm_A 254 CTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVIQHG- 326 (394)
T ss_dssp HHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTCCBT-
T ss_pred HHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHhhcC-
Confidence 2222221 245677776553 568988888 77 556678999999999999987753 333445552
Q ss_pred ccceecCCCCCHHHHHHHHHHHhcccc-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 012735 384 KVGLQLENGLKREEIEKTIRRVMVEKQ-GEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILSL 449 (457)
Q Consensus 384 G~g~~l~~~~~~~~l~~ai~~il~~~~-~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (457)
+.|...+. -++++++++|.++++|.+ ...+.+++++.. .+..+.++.++.+++.+++.
T Consensus 327 ~~g~~~~~-~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~-------~~~~s~~~~~~~~~~~~~~~ 385 (394)
T 2jjm_A 327 DTGYLCEV-GDTTGVADQAIQLLKDEELHRNMGERARESV-------YEQFRSEKIVSQYETIYYDV 385 (394)
T ss_dssp TTEEEECT-TCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-------HHHSCHHHHHHHHHHHHHHT
T ss_pred CceEEeCC-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH-------HHhCCHHHHHHHHHHHHHHH
Confidence 57777765 489999999999999832 233444444433 13356888888888888764
No 30
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.29 E-value=3.6e-11 Score=114.95 Aligned_cols=134 Identities=13% Similarity=0.146 Sum_probs=85.2
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHhhC-----CCCeEEEECCCCCCCCCCCCCCchhHHHhh--cCCCccccccCh-
Q 012735 261 PKSVIYVSFGSIAAVSEAEFLEIAWGLANC-----KLPFLWVVRPGLTRGSDCLEPLPSGFMEMV--DGRGHLVKWAPQ- 332 (457)
Q Consensus 261 ~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~--~~~~~~~~~vpq- 332 (457)
++++|+++.|...... .+..+++|++.. +..+++..+.+. .+-+.+.+.. .+++.+.+++++
T Consensus 197 ~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~--------~~~~~l~~~~~~~~~v~~~g~~g~~ 266 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNP--------VVREAVFPVLKGVRNFVLLDPLEYG 266 (376)
T ss_dssp SSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCH--------HHHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCH--------HHHHHHHHHhccCCCEEEECCCCHH
Confidence 3456777777653321 345566666532 333333333211 0112232222 246777766664
Q ss_pred --HhhhcCCCCCCcccccChhHHHHHHhhCCcccccCccchhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHhcccc
Q 012735 333 --QEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVMVEKQ 410 (457)
Q Consensus 333 --~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~~~~ 410 (457)
.++|+.+++ ||+.+| |.+.||+.+|+|+|+.+..+++... .+. |.|+.+. .+++.|++++.++++|
T Consensus 267 ~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~~-g~g~lv~--~d~~~la~~i~~ll~d-- 334 (376)
T 1v4v_A 267 SMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LKA-GILKLAG--TDPEGVYRVVKGLLEN-- 334 (376)
T ss_dssp HHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HHH-TSEEECC--SCHHHHHHHHHHHHTC--
T ss_pred HHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hcC-CceEECC--CCHHHHHHHHHHHHhC--
Confidence 478988998 998884 5566999999999998877776663 454 8887775 3899999999999998
Q ss_pred hHHHHHH
Q 012735 411 GEEIRSR 417 (457)
Q Consensus 411 ~~~~~~~ 417 (457)
+..+++
T Consensus 335 -~~~~~~ 340 (376)
T 1v4v_A 335 -PEELSR 340 (376)
T ss_dssp -HHHHHH
T ss_pred -hHhhhh
Confidence 544443
No 31
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.23 E-value=1.8e-10 Score=109.78 Aligned_cols=160 Identities=15% Similarity=0.210 Sum_probs=102.1
Q ss_pred CcEEEEEecccccCCHHHHHHHHHHHhhCCC----Ce-EEEECCCCCCCCCCCCCCchhHHH---hh--cCCCccccccC
Q 012735 262 KSVIYVSFGSIAAVSEAEFLEIAWGLANCKL----PF-LWVVRPGLTRGSDCLEPLPSGFME---MV--DGRGHLVKWAP 331 (457)
Q Consensus 262 ~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~----~~-i~~~~~~~~~~~~~~~~lp~~~~~---~~--~~~~~~~~~vp 331 (457)
++.+++..|+.. +.+....++++++.... .+ ++.++.+. .+.+.+ .. .+|+.+.++..
T Consensus 195 ~~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~----------~~~~~~~~~~~~~~~~v~~~g~~~ 262 (374)
T 2iw1_A 195 QQNLLLQVGSDF--GRKGVDRSIEALASLPESLRHNTLLFVVGQDK----------PRKFEALAEKLGVRSNVHFFSGRN 262 (374)
T ss_dssp TCEEEEEECSCT--TTTTHHHHHHHHHTSCHHHHHTEEEEEESSSC----------CHHHHHHHHHHTCGGGEEEESCCS
T ss_pred CCeEEEEeccch--hhcCHHHHHHHHHHhHhccCCceEEEEEcCCC----------HHHHHHHHHHcCCCCcEEECCCcc
Confidence 345677778766 34556677788876532 23 44444321 122222 11 35667777765
Q ss_pred h-HhhhcCCCCCCccc----ccChhHHHHHHhhCCcccccCccchhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHh
Q 012735 332 Q-QEVLAHPAVGAFWT----HNGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVM 406 (457)
Q Consensus 332 q-~~lL~~~~~~~~I~----hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il 406 (457)
+ ..+++.+++ +|. -|..+++.||+.+|+|+|+.+.. .+...+++. +.|..++..-+++++.++|.+++
T Consensus 263 ~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~-~~g~~~~~~~~~~~l~~~i~~l~ 335 (374)
T 2iw1_A 263 DVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAVC----GYAHYIADA-NCGTVIAEPFSQEQLNEVLRKAL 335 (374)
T ss_dssp CHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETTS----TTTHHHHHH-TCEEEECSSCCHHHHHHHHHHHH
T ss_pred cHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecCC----CchhhhccC-CceEEeCCCCCHHHHHHHHHHHH
Confidence 4 468888888 775 46678999999999999997653 456777874 88988873368999999999999
Q ss_pred cccc-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 012735 407 VEKQ-GEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILS 448 (457)
Q Consensus 407 ~~~~-~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (457)
+|.+ +..+.+++++..++. +.+...+.+.+.+++
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~ 370 (374)
T 2iw1_A 336 TQSPLRMAWAENARHYADTQ--------DLYSLPEKAADIITG 370 (374)
T ss_dssp HCHHHHHHHHHHHHHHHHHS--------CCSCHHHHHHHHHHC
T ss_pred cChHHHHHHHHHHHHHHHHh--------hHHHHHHHHHHHHHH
Confidence 9832 234444444444432 344555555555544
No 32
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.22 E-value=5.2e-11 Score=114.51 Aligned_cols=109 Identities=14% Similarity=0.186 Sum_probs=76.7
Q ss_pred CCCccccccCh---HhhhcCCCCCCcccccChhHHHHHHhhCCcccccCccchhhHHHHHHHhhhccceecCCCCCHHHH
Q 012735 322 GRGHLVKWAPQ---QEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEI 398 (457)
Q Consensus 322 ~~~~~~~~vpq---~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l 398 (457)
+|+++.+++++ ..+++++++ +|+..|..+ .||+.+|+|+|++|-..++++. .+. |.|+.+.. +++.|
T Consensus 282 ~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e~----v~~-g~~~lv~~--d~~~l 351 (403)
T 3ot5_A 282 ERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPEG----IEA-GTLKLIGT--NKENL 351 (403)
T ss_dssp TTEEEECCCCHHHHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHHH----HHH-TSEEECCS--CHHHH
T ss_pred CCEEEeCCCCHHHHHHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchhh----eeC-CcEEEcCC--CHHHH
Confidence 57788888874 358888888 998875333 7999999999999776666542 354 87776654 89999
Q ss_pred HHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 012735 399 EKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHIL 447 (457)
Q Consensus 399 ~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (457)
.+++.++++| +..+++..+.+..+ ..++++++.++.+.+++.
T Consensus 352 ~~ai~~ll~~---~~~~~~m~~~~~~~----g~~~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 352 IKEALDLLDN---KESHDKMAQAANPY----GDGFAANRILAAIKSHFE 393 (403)
T ss_dssp HHHHHHHHHC---HHHHHHHHHSCCTT----CCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcC---HHHHHHHHhhcCcc----cCCcHHHHHHHHHHHHhC
Confidence 9999999998 55554433322222 255666666666666553
No 33
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.21 E-value=2.3e-09 Score=106.44 Aligned_cols=168 Identities=13% Similarity=0.121 Sum_probs=101.6
Q ss_pred EEEEEecccccCCHHHHHHHHHHHhhCCC----C-eEEEECCCCCCCCCCCCCC-------chhHHHhh-----cCCCcc
Q 012735 264 VIYVSFGSIAAVSEAEFLEIAWGLANCKL----P-FLWVVRPGLTRGSDCLEPL-------PSGFMEMV-----DGRGHL 326 (457)
Q Consensus 264 vv~vs~Gs~~~~~~~~~~~~~~al~~~~~----~-~i~~~~~~~~~~~~~~~~l-------p~~~~~~~-----~~~~~~ 326 (457)
.+++..|+.. +.+.+..+++|++.... . .++.++.......+ ...+ -+.+.+.. .+++.+
T Consensus 263 ~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~-y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~ 339 (499)
T 2r60_A 263 PAIIASSRLD--QKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFED-YSRAGQEEKEILGKIIELIDNNDCRGKVSM 339 (499)
T ss_dssp CEEEECSCCC--GGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTB-CTTSCHHHHHHHHHHHHHHHHTTCBTTEEE
T ss_pred cEEEEeecCc--cccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccc-cccccccchHHHHHHHHHHHhcCCCceEEE
Confidence 4566778776 34556677778776521 2 34555541100000 0001 12222221 356788
Q ss_pred ccccChH---hhhcCC----CCCCcccc----cChhHHHHHHhhCCcccccCccchhhHHHHHHHhhhccceecCCCCCH
Q 012735 327 VKWAPQQ---EVLAHP----AVGAFWTH----NGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKR 395 (457)
Q Consensus 327 ~~~vpq~---~lL~~~----~~~~~I~h----gG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~ 395 (457)
.+++|+. .+++.+ ++ +|.- |-..++.||+.+|+|+|+... ......+.+. +.|..++. -++
T Consensus 340 ~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~~~-~d~ 411 (499)
T 2r60_A 340 FPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLVDP-EDP 411 (499)
T ss_dssp EECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEECT-TCH
T ss_pred CCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEeCC-CCH
Confidence 8999865 477778 77 6632 334689999999999998764 3455666663 57888876 589
Q ss_pred HHHHHHHHHHhcccc-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 012735 396 EEIEKTIRRVMVEKQ-GEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILSL 449 (457)
Q Consensus 396 ~~l~~ai~~il~~~~-~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (457)
++++++|.++++|.+ +..+.+++++..+ +..+.++.++.+++.+++.
T Consensus 412 ~~la~~i~~ll~~~~~~~~~~~~a~~~~~-------~~fs~~~~~~~~~~~y~~~ 459 (499)
T 2r60_A 412 EDIARGLLKAFESEETWSAYQEKGKQRVE-------ERYTWQETARGYLEVIQEI 459 (499)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHH-------HHSBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHH-------HhCCHHHHHHHHHHHHHHH
Confidence 999999999999832 2233344443333 3345677777777666543
No 34
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.21 E-value=6.5e-11 Score=113.65 Aligned_cols=157 Identities=11% Similarity=0.107 Sum_probs=93.0
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHhhC-----CCCeEEEECCCCCCCCCCCCCCchhHHHhh--cCCCccccccCh-
Q 012735 261 PKSVIYVSFGSIAAVSEAEFLEIAWGLANC-----KLPFLWVVRPGLTRGSDCLEPLPSGFMEMV--DGRGHLVKWAPQ- 332 (457)
Q Consensus 261 ~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~--~~~~~~~~~vpq- 332 (457)
++++|+++.+-...... .+..+++|++.. +..+++.++.+. .+-+.+.+.. .+|+++.+++++
T Consensus 229 ~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~~--------~~~~~l~~~~~~~~~v~~~~~lg~~ 299 (396)
T 3dzc_A 229 SKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVHLNP--------NVREPVNKLLKGVSNIVLIEPQQYL 299 (396)
T ss_dssp TSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBCH--------HHHHHHHHHTTTCTTEEEECCCCHH
T ss_pred CCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeCCCh--------HHHHHHHHHHcCCCCEEEeCCCCHH
Confidence 45677777533222112 245677776543 334444332110 0112232221 246777777753
Q ss_pred --HhhhcCCCCCCcccccChhHHHHHHhhCCcccccCccchhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHhcccc
Q 012735 333 --QEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVMVEKQ 410 (457)
Q Consensus 333 --~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~~~~ 410 (457)
..+++.+++ +|+-+| |.+.||+.+|+|+|+..-..++++ +.+. |.++.+.. +++.|.+++.++++|
T Consensus 300 ~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e----~v~~-G~~~lv~~--d~~~l~~ai~~ll~d-- 367 (396)
T 3dzc_A 300 PFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERPE----AVAA-GTVKLVGT--NQQQICDALSLLLTD-- 367 (396)
T ss_dssp HHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCHH----HHHH-TSEEECTT--CHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcchH----HHHc-CceEEcCC--CHHHHHHHHHHHHcC--
Confidence 468888998 999988 666899999999999865555532 3454 87755543 799999999999998
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 012735 411 GEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHIL 447 (457)
Q Consensus 411 ~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (457)
+..+++..+.... .+...+.+.+++.|+
T Consensus 368 -~~~~~~m~~~~~~--------~~~~~aa~ri~~~l~ 395 (396)
T 3dzc_A 368 -PQAYQAMSQAHNP--------YGDGKACQRIADILA 395 (396)
T ss_dssp -HHHHHHHHTSCCT--------TCCSCHHHHHHHHHH
T ss_pred -HHHHHHHhhccCC--------CcCChHHHHHHHHHh
Confidence 5544433322222 233445556666554
No 35
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.19 E-value=4.3e-11 Score=114.66 Aligned_cols=164 Identities=16% Similarity=0.175 Sum_probs=99.1
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHhhC-----CCCeEEEECCCCCCCCCCCCCCchhHHHhhc--CCCccccccCh-
Q 012735 261 PKSVIYVSFGSIAAVSEAEFLEIAWGLANC-----KLPFLWVVRPGLTRGSDCLEPLPSGFMEMVD--GRGHLVKWAPQ- 332 (457)
Q Consensus 261 ~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~--~~~~~~~~vpq- 332 (457)
++++|+++.|+..... +.+..+++++... +..+++..+.+. .+.+.+.+... +++.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~--------~~~~~l~~~~~~~~~v~~~g~~~~~ 274 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNP--------NVREPVNRILGHVKNVILIDPQEYL 274 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCH--------HHHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCH--------HHHHHHHHHhhcCCCEEEeCCCCHH
Confidence 4567888888765321 3455666666542 233443222110 01122322222 56777666664
Q ss_pred --HhhhcCCCCCCcccccChhHHHHHHhhCCcccccCccchhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHhcccc
Q 012735 333 --QEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVMVEKQ 410 (457)
Q Consensus 333 --~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~~~~ 410 (457)
.++|+.+++ ||+.+|. ++.||+.+|+|+|+.+..++..+ +.+. |.|..++. ++++|+++|.++++|
T Consensus 275 ~~~~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~e----~v~~-g~g~lv~~--d~~~la~~i~~ll~d-- 342 (384)
T 1vgv_A 275 PFVWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTERPE----AVTA-GTVRLVGT--DKQRIVEEVTRLLKD-- 342 (384)
T ss_dssp HHHHHHHHCSE--EEESSST-GGGTGGGGTCCEEEESSCCSCHH----HHHH-TSEEEECS--SHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhCcE--EEECCcc-hHHHHHHcCCCEEEccCCCCcch----hhhC-CceEEeCC--CHHHHHHHHHHHHhC--
Confidence 458888998 9998854 48899999999999987544433 3454 88887765 899999999999998
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcc
Q 012735 411 GEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILSLE 450 (457)
Q Consensus 411 ~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (457)
+..+++..+-+.++ .+..+.++.++.+.+.+++..
T Consensus 343 -~~~~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~ 377 (384)
T 1vgv_A 343 -ENEYQAMSRAHNPY----GDGQACSRILEALKNNRISLG 377 (384)
T ss_dssp -HHHHHHHHSSCCTT----CCSCHHHHHHHHHHHTCCCC-
T ss_pred -hHHHhhhhhccCCC----cCCCHHHHHHHHHHHHHHhhc
Confidence 54433322211112 144556666666666555444
No 36
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.19 E-value=1.1e-09 Score=102.99 Aligned_cols=148 Identities=14% Similarity=0.128 Sum_probs=95.5
Q ss_pred EEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCCCCch---hHHHhhcCCCccccccChH---hhhcC
Q 012735 265 IYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLEPLPS---GFMEMVDGRGHLVKWAPQQ---EVLAH 338 (457)
Q Consensus 265 v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~---~~~~~~~~~~~~~~~vpq~---~lL~~ 338 (457)
+++..|+.. +.+....++++++..+.++++ ++.+. ..+ ...+...+|+.+.+|+|+. .+++.
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i-~G~g~---------~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~ 231 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVL-AGPAW---------EPEYFDEITRRYGSTVEPIGEVGGERRLDLLAS 231 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEE-ESCCC---------CHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHH
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEE-EeCcc---------cHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHh
Confidence 444567766 445566777888777666444 44321 112 2233344788899999965 68888
Q ss_pred CCCCCccc--------------ccChhHHHHHHhhCCcccccCccchhhHHHHHHHh--hhccceecCCCCCHHHHHHHH
Q 012735 339 PAVGAFWT--------------HNGWNSTLESICEGIPMICMPCFTDQKVNARYVSD--VWKVGLQLENGLKREEIEKTI 402 (457)
Q Consensus 339 ~~~~~~I~--------------hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~--~lG~g~~l~~~~~~~~l~~ai 402 (457)
+++ +|. -|-.+++.||+.+|+|+|+.... .+.+.+++ . +.|...+. +.++++++|
T Consensus 232 adv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~~~~~~-~~g~~~~~--d~~~l~~~i 302 (342)
T 2iuy_A 232 AHA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIVPSVGE-VVGYGTDF--APDEARRTL 302 (342)
T ss_dssp CSE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHGGGGEE-ECCSSSCC--CHHHHHHHH
T ss_pred CCE--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHhcccCC-CceEEcCC--CHHHHHHHH
Confidence 888 662 23346899999999999998763 45666665 4 56666654 999999999
Q ss_pred HHHhcccchHHHHHHHHHHH-HHHHHHHhcCCChHHHHHHHHHHHHh
Q 012735 403 RRVMVEKQGEEIRSRIFRLK-EKANHSWKQGRSSFESINSLVTHILS 448 (457)
Q Consensus 403 ~~il~~~~~~~~~~~a~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (457)
.++++ .+++++.. +.+. .++.++.+++.+++
T Consensus 303 ~~l~~-------~~~~~~~~~~~~s--------~~~~~~~~~~~~~~ 334 (342)
T 2iuy_A 303 AGLPA-------SDEVRRAAVRLWG--------HVTIAERYVEQYRR 334 (342)
T ss_dssp HTSCC-------HHHHHHHHHHHHB--------HHHHHHHHHHHHHH
T ss_pred HHHHH-------HHHHHHHHHHhcC--------HHHHHHHHHHHHHH
Confidence 99886 22333322 3332 56666666666554
No 37
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.18 E-value=4.4e-10 Score=107.20 Aligned_cols=162 Identities=12% Similarity=0.156 Sum_probs=96.6
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHhhC---CCCeEEEECCCCCCCCCCCCCCchhHHHhhc--CCCccccccCh---
Q 012735 261 PKSVIYVSFGSIAAVSEAEFLEIAWGLANC---KLPFLWVVRPGLTRGSDCLEPLPSGFMEMVD--GRGHLVKWAPQ--- 332 (457)
Q Consensus 261 ~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~---~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~--~~~~~~~~vpq--- 332 (457)
++++++++.|...... +.+..+++|++.. ..++.+.++.+. ...+-+.+.+... +|+.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~~~g~------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 276 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVYPVHM------NPVVRETANDILGDYGRIHLIEPLDVIDF 276 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEEECCS------CHHHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEEeCCC------CHHHHHHHHHHhhccCCEEEeCCCCHHHH
Confidence 3566777777654321 4556677777543 113333333321 0001122322223 57778777775
Q ss_pred HhhhcCCCCCCcccccChhHHHHHHhhCCcccccCccchhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHhcccchH
Q 012735 333 QEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVMVEKQGE 412 (457)
Q Consensus 333 ~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~~~~~~ 412 (457)
..+|+.+++ +|+.+| +++.||+.+|+|+|+....+...+ +.+. |.|..++. ++++|+++|.++++| +
T Consensus 277 ~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~e----~v~~-g~g~~v~~--d~~~la~~i~~ll~~---~ 343 (375)
T 3beo_A 277 HNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERPE----GIEA-GTLKLAGT--DEETIFSLADELLSD---K 343 (375)
T ss_dssp HHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCHH----HHHT-TSEEECCS--CHHHHHHHHHHHHHC---H
T ss_pred HHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCce----eecC-CceEEcCC--CHHHHHHHHHHHHhC---h
Confidence 358888888 998874 558899999999999865343322 3454 88877754 899999999999998 5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 012735 413 EIRSRIFRLKEKANHSWKQGRSSFESINSLVTHI 446 (457)
Q Consensus 413 ~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (457)
..+++..+-+.++. +..+.++.++.+.+.+
T Consensus 344 ~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~ 373 (375)
T 3beo_A 344 EAHDKMSKASNPYG----DGRASERIVEAILKHF 373 (375)
T ss_dssp HHHHHHCCCCCTTC----CSCHHHHHHHHHHHHT
T ss_pred HhHhhhhhcCCCCC----CCcHHHHHHHHHHHHh
Confidence 54433222111111 3455666666665554
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.02 E-value=9.1e-08 Score=92.46 Aligned_cols=111 Identities=10% Similarity=0.044 Sum_probs=77.8
Q ss_pred CCCccccccC---h---HhhhcCCCCCCccccc----ChhHHHHHHhhCCcccccCccchhhHHHHHHHhhhccceecCC
Q 012735 322 GRGHLVKWAP---Q---QEVLAHPAVGAFWTHN----GWNSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVGLQLEN 391 (457)
Q Consensus 322 ~~~~~~~~vp---q---~~lL~~~~~~~~I~hg----G~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~ 391 (457)
+++.+.+|++ + ..+++.+++ +|.-. ..+++.||+.+|+|+|+.+. ..+...+.+. +.|...+
T Consensus 293 ~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~- 364 (416)
T 2x6q_A 293 YDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR- 364 (416)
T ss_dssp TTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES-
T ss_pred CcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC-
Confidence 5778878775 2 347878888 77544 45789999999999999765 3566666663 6787775
Q ss_pred CCCHHHHHHHHHHHhcccc-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 012735 392 GLKREEIEKTIRRVMVEKQ-GEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILSL 449 (457)
Q Consensus 392 ~~~~~~l~~ai~~il~~~~-~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (457)
++++++++|.++++|.+ ...+.+++++... +..+.+..++.+++.+++.
T Consensus 365 --d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~-------~~fs~~~~~~~~~~~~~~l 414 (416)
T 2x6q_A 365 --DANEAVEVVLYLLKHPEVSKEMGAKAKERVR-------KNFIITKHMERYLDILNSL 414 (416)
T ss_dssp --SHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH-------HHTBHHHHHHHHHHHHHTC
T ss_pred --CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-------HHcCHHHHHHHHHHHHHHh
Confidence 89999999999999821 2233333333322 3355788888888887653
No 39
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.87 E-value=5.3e-08 Score=100.59 Aligned_cols=168 Identities=11% Similarity=0.054 Sum_probs=98.7
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHhhCCC---C-eEEEECCCCCCCCCCCCCCc------hhHHH---hh--cCCCccc
Q 012735 263 SVIYVSFGSIAAVSEAEFLEIAWGLANCKL---P-FLWVVRPGLTRGSDCLEPLP------SGFME---MV--DGRGHLV 327 (457)
Q Consensus 263 ~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~---~-~i~~~~~~~~~~~~~~~~lp------~~~~~---~~--~~~~~~~ 327 (457)
+.+++..|... +.+.+..+++|++.... . -++.++++.... ...+ +.+.+ .. .+++.+.
T Consensus 572 ~~vIl~vGRl~--~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~----~~~~e~~~~~~~L~~li~~lgL~~~V~fl 645 (816)
T 3s28_A 572 KPILFTMARLD--RVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKE----SKDNEEKAEMKKMYDLIEEYKLNGQFRWI 645 (816)
T ss_dssp SCEEEEECCCC--TTTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSC----CCCHHHHHHHHHHHHHHHHTTCBBBEEEE
T ss_pred CeEEEEEccCc--ccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCccc----ccchhhHHHHHHHHHHHHHcCCCCcEEEc
Confidence 45667778876 45566777777766521 2 234444332000 0001 11111 11 2456666
Q ss_pred c----ccChHhhhc----CCCCCCcccc----cChhHHHHHHhhCCcccccCccchhhHHHHHHHhhhccceecCCCCCH
Q 012735 328 K----WAPQQEVLA----HPAVGAFWTH----NGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKR 395 (457)
Q Consensus 328 ~----~vpq~~lL~----~~~~~~~I~h----gG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~ 395 (457)
+ ++|+.++.. .+++ +|.- |-..++.||+++|+|+|+.. .......+.+. +.|..++. -++
T Consensus 646 G~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd----~GG~~EiV~dg-~~Gllv~p-~D~ 717 (816)
T 3s28_A 646 SSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVHG-KSGFHIDP-YHG 717 (816)
T ss_dssp CCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEES----SBTHHHHCCBT-TTBEEECT-TSH
T ss_pred cCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeC----CCChHHHHccC-CcEEEeCC-CCH
Confidence 6 444454443 4566 6632 34579999999999999864 44556666663 67888876 589
Q ss_pred HHHHHHHHHHh----cccc-hHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhccc
Q 012735 396 EEIEKTIRRVM----VEKQ-GEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILSLET 451 (457)
Q Consensus 396 ~~l~~ai~~il----~~~~-~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (457)
++++++|.+++ .|.+ ...+.+++++. ..+..+.+..++.+++.++.+..
T Consensus 718 e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~-------a~~~fSwe~~a~~ll~lY~~~g~ 771 (816)
T 3s28_A 718 DQAADTLADFFTKCKEDPSHWDEISKGGLQR-------IEEKYTWQIYSQRLLTLTGVYGF 771 (816)
T ss_dssp HHHHHHHHHHHHHHHHCTHHHHHHHHHHHHH-------HHHSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHHHHH-------HHHhCCHHHHHHHHHHHHHHHhH
Confidence 99999997776 6621 22333333332 22456788888888888876653
No 40
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.85 E-value=3.8e-09 Score=100.56 Aligned_cols=157 Identities=10% Similarity=0.097 Sum_probs=95.4
Q ss_pred CcEEEEEeccccc-CCHHHHHHHHHHHhhC----CCCeEEEECCCCCCCCCCCCCCchhHHHh---h--cCCCccccccC
Q 012735 262 KSVIYVSFGSIAA-VSEAEFLEIAWGLANC----KLPFLWVVRPGLTRGSDCLEPLPSGFMEM---V--DGRGHLVKWAP 331 (457)
Q Consensus 262 ~~vv~vs~Gs~~~-~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~~~lp~~~~~~---~--~~~~~~~~~vp 331 (457)
+++|+++.|.... ...+.+..+++++... +..+++..... +.+.+.+. . .+|+++.+.++
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~----------~~~~l~~~~~~~~~~~~v~l~~~lg 272 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR----------TKKRLEDLEGFKELGDKIRFLPAFS 272 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH----------HHHHHHTSGGGGGTGGGEEECCCCC
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH----------HHHHHHHHHHHhcCCCCEEEEcCCC
Confidence 5688888876543 2235566777777643 45555544211 11112111 1 24556665555
Q ss_pred h---HhhhcCCCCCCcccccChhHHHHHHhhCCcccccCccchhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHhcc
Q 012735 332 Q---QEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVMVE 408 (457)
Q Consensus 332 q---~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~~ 408 (457)
+ ..+++++++ +|+-.|. .+.||...|+|+|+++...+-++ ..++ |.++.+. .+++.|.+++.++++|
T Consensus 273 ~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~-G~~~lv~--~d~~~i~~ai~~ll~d 342 (385)
T 4hwg_A 273 FTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE----GMDA-GTLIMSG--FKAERVLQAVKTITEE 342 (385)
T ss_dssp HHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHH-TCCEECC--SSHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhc-CceEEcC--CCHHHHHHHHHHHHhC
Confidence 4 468988888 9999876 46999999999999987654232 2453 8776654 3899999999999988
Q ss_pred cc-hHHHHHHHHHHHHHH-HHHHhcCCChHHHHHHHHHHH
Q 012735 409 KQ-GEEIRSRIFRLKEKA-NHSWKQGRSSFESINSLVTHI 446 (457)
Q Consensus 409 ~~-~~~~~~~a~~l~~~~-~~~~~~~~~~~~~~~~~~~~~ 446 (457)
++ ...+++++. .+ . .++++++.++.+.+++
T Consensus 343 ~~~~~~m~~~~~----~~~g----~g~aa~rI~~~l~~~~ 374 (385)
T 4hwg_A 343 HDNNKRTQGLVP----DYNE----AGLVSKKILRIVLSYV 374 (385)
T ss_dssp CBTTBCCSCCCH----HHHT----CCCHHHHHHHHHHHHH
T ss_pred hHHHHHhhccCC----CCCC----CChHHHHHHHHHHHHh
Confidence 32 112222222 23 3 5666676666666554
No 41
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.79 E-value=3.5e-07 Score=88.19 Aligned_cols=111 Identities=13% Similarity=0.049 Sum_probs=73.8
Q ss_pred CccccccChH---hhhcCCCCCCccc----ccChhHHHHHHhhCCcccccCccchhhHHHHHHHhhhcc-----------
Q 012735 324 GHLVKWAPQQ---EVLAHPAVGAFWT----HNGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVWKV----------- 385 (457)
Q Consensus 324 ~~~~~~vpq~---~lL~~~~~~~~I~----hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~----------- 385 (457)
+.+.+|+|+. ++|+.+++ +|. -|...++.||+.+|+|+|+.... .....+.+. ..
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v~~~-~~~~i~~~~~~~~ 328 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYFSGD-CVYKIKPSAWISV 328 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHSCTT-TSEEECCCEEEEC
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHHccC-ccccccccccccc
Confidence 4455999954 47888888 663 33456999999999999986543 445555442 22
Q ss_pred ----ce--ecCCCCCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 012735 386 ----GL--QLENGLKREEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILSL 449 (457)
Q Consensus 386 ----g~--~l~~~~~~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (457)
|. .+.. -++++++++| ++++| +..+++ +++..++...+..+.++.++.+++.+++.
T Consensus 329 ~~~~G~~gl~~~-~d~~~la~~i-~l~~~---~~~~~~---~~~~a~~~~~~~fs~~~~~~~~~~~~~~~ 390 (413)
T 3oy2_A 329 DDRDGIGGIEGI-IDVDDLVEAF-TFFKD---EKNRKE---YGKRVQDFVKTKPTWDDISSDIIDFFNSL 390 (413)
T ss_dssp TTTCSSCCEEEE-CCHHHHHHHH-HHTTS---HHHHHH---HHHHHHHHHTTSCCHHHHHHHHHHHHHHH
T ss_pred ccccCcceeeCC-CCHHHHHHHH-HHhcC---HHHHHH---HHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 55 4443 4899999999 99998 544332 22222222235667888888888888764
No 42
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.64 E-value=2.5e-05 Score=78.63 Aligned_cols=117 Identities=9% Similarity=0.036 Sum_probs=76.9
Q ss_pred CCCccccccChH---hhhcCCCCCCccc---ccChhHHHHHHhhCCcccccCccchhhHH-HHHHHhhhccceecCCCCC
Q 012735 322 GRGHLVKWAPQQ---EVLAHPAVGAFWT---HNGWNSTLESICEGIPMICMPCFTDQKVN-ARYVSDVWKVGLQLENGLK 394 (457)
Q Consensus 322 ~~~~~~~~vpq~---~lL~~~~~~~~I~---hgG~~s~~eal~~gvP~v~~P~~~DQ~~n-a~~v~~~lG~g~~l~~~~~ 394 (457)
+++.+.+++|+. .++..+++ ||. .|+.+++.||+.+|+|+|++|...=.... +..+.. .|+.-.+.. +
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~~--~ 508 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNVA--D 508 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBCS--S
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhcC--C
Confidence 567888999854 46888888 652 26678999999999999997753111112 344555 376655544 8
Q ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH--hcCCChHHHHHHHHHHHHhc
Q 012735 395 REEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSW--KQGRSSFESINSLVTHILSL 449 (457)
Q Consensus 395 ~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 449 (457)
++++.+++.++++| +..+++ +++..++.. .+..+.+..++.+++.+++.
T Consensus 509 ~~~la~~i~~l~~~---~~~~~~---~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~ 559 (568)
T 2vsy_A 509 DAAFVAKAVALASD---PAALTA---LHARVDVLRRASGVFHMDGFADDFGALLQAL 559 (568)
T ss_dssp HHHHHHHHHHHHHC---HHHHHH---HHHHHHHHHHHSSTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC---HHHHHH---HHHHHHHhhhcCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999998 443332 222222222 24566777777777766543
No 43
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.57 E-value=3.6e-06 Score=80.90 Aligned_cols=73 Identities=10% Similarity=0.009 Sum_probs=56.1
Q ss_pred CCCccccccChH---hhhcCCCCCCccc---ccC-hhHHHHHH-------hhCCcccccCccchhhHHHHHHHhhhccce
Q 012735 322 GRGHLVKWAPQQ---EVLAHPAVGAFWT---HNG-WNSTLESI-------CEGIPMICMPCFTDQKVNARYVSDVWKVGL 387 (457)
Q Consensus 322 ~~~~~~~~vpq~---~lL~~~~~~~~I~---hgG-~~s~~eal-------~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~ 387 (457)
+|+.+.+++|+. ++++.+++ +|. ..| .+++.||+ ++|+|+|+... +... ..|.
T Consensus 265 ~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~ 331 (406)
T 2hy7_A 265 DNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSR 331 (406)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSE
T ss_pred CCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceE
Confidence 444888999965 47888888 663 233 46789999 99999999765 5553 5677
Q ss_pred e-cCCCCCHHHHHHHHHHHhcc
Q 012735 388 Q-LENGLKREEIEKTIRRVMVE 408 (457)
Q Consensus 388 ~-l~~~~~~~~l~~ai~~il~~ 408 (457)
. ++. -++++++++|.++++|
T Consensus 332 l~v~~-~d~~~la~ai~~ll~~ 352 (406)
T 2hy7_A 332 FGYTP-GNADSVIAAITQALEA 352 (406)
T ss_dssp EEECT-TCHHHHHHHHHHHHHC
T ss_pred EEeCC-CCHHHHHHHHHHHHhC
Confidence 6 655 5899999999999988
No 44
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.55 E-value=7.7e-07 Score=87.78 Aligned_cols=158 Identities=13% Similarity=0.070 Sum_probs=95.4
Q ss_pred EEEEEecccccCCHHHHHHHHHHHhhC---CCCeEEEECCCCCCCCCCCCCCchhHH---HhhcCCCc-cccccChH---
Q 012735 264 VIYVSFGSIAAVSEAEFLEIAWGLANC---KLPFLWVVRPGLTRGSDCLEPLPSGFM---EMVDGRGH-LVKWAPQQ--- 333 (457)
Q Consensus 264 vv~vs~Gs~~~~~~~~~~~~~~al~~~---~~~~i~~~~~~~~~~~~~~~~lp~~~~---~~~~~~~~-~~~~vpq~--- 333 (457)
.+++..|+... .+.+..+++|++.+ +.++++ ++.+. ...-+.+. +..++++. +.++ +..
T Consensus 292 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~i-vG~g~-------~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~ 360 (485)
T 1rzu_A 292 PLFCVISRLTW--QKGIDLMAEAVDEIVSLGGRLVV-LGAGD-------VALEGALLAAASRHHGRVGVAIGY-NEPLSH 360 (485)
T ss_dssp CEEEEESCBST--TTTHHHHHTTHHHHHHTTCEEEE-EECBC-------HHHHHHHHHHHHHTTTTEEEEESC-CHHHHH
T ss_pred eEEEEEccCcc--ccCHHHHHHHHHHHHhcCceEEE-EeCCc-------hHHHHHHHHHHHhCCCcEEEecCC-CHHHHH
Confidence 36777888764 34444555555432 444433 33321 00112222 22345676 5677 533
Q ss_pred hhhcCCCCCCccc----ccChhHHHHHHhhCCcccccCccchhhHHHHHHHhhh---------ccceecCCCCCHHHHHH
Q 012735 334 EVLAHPAVGAFWT----HNGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVW---------KVGLQLENGLKREEIEK 400 (457)
Q Consensus 334 ~lL~~~~~~~~I~----hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~l---------G~g~~l~~~~~~~~l~~ 400 (457)
.+++.+++ +|. -|...++.||+.+|+|+|+.... ...+.+.+ - +.|..++. -+++++++
T Consensus 361 ~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~g----g~~e~v~~-~~~~~~~~~~~~G~l~~~-~d~~~la~ 432 (485)
T 1rzu_A 361 LMQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVARTG----GLADTVID-ANHAALASKAATGVQFSP-VTLDGLKQ 432 (485)
T ss_dssp HHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCB-CCHHHHHTTCCCBEEESS-CSHHHHHH
T ss_pred HHHhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCCC----Chhheecc-cccccccccCCcceEeCC-CCHHHHHH
Confidence 57888888 763 23456899999999999997653 44454544 2 36777765 58999999
Q ss_pred HHHHHh---cccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 012735 401 TIRRVM---VEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILSL 449 (457)
Q Consensus 401 ai~~il---~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (457)
+|.+++ +| +..+++.. +..+ .+..+.+..++.+++.+++.
T Consensus 433 ~i~~ll~~~~~---~~~~~~~~---~~~~---~~~fs~~~~~~~~~~~y~~~ 475 (485)
T 1rzu_A 433 AIRRTVRYYHD---PKLWTQMQ---KLGM---KSDVSWEKSAGLYAALYSQL 475 (485)
T ss_dssp HHHHHHHHHTC---HHHHHHHH---HHHH---TCCCBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCC---HHHHHHHH---HHHH---HHhCChHHHHHHHHHHHHHh
Confidence 999999 67 44333222 2222 15677888888888887664
No 45
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.51 E-value=1.7e-06 Score=85.35 Aligned_cols=161 Identities=14% Similarity=0.098 Sum_probs=95.5
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHhhC---CCCeEEEECCCCCCCCCCCCCCchhHH---HhhcCCCc-cccccCh--H
Q 012735 263 SVIYVSFGSIAAVSEAEFLEIAWGLANC---KLPFLWVVRPGLTRGSDCLEPLPSGFM---EMVDGRGH-LVKWAPQ--Q 333 (457)
Q Consensus 263 ~vv~vs~Gs~~~~~~~~~~~~~~al~~~---~~~~i~~~~~~~~~~~~~~~~lp~~~~---~~~~~~~~-~~~~vpq--~ 333 (457)
..+++..|.... .+.+..+++|++.+ +.++++ ++.+. ....+.+. +...+++. +.++... .
T Consensus 292 ~~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~i-vG~g~-------~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~ 361 (485)
T 2qzs_A 292 VPLFAVVSRLTS--QKGLDLVLEALPGLLEQGGQLAL-LGAGD-------PVLQEGFLAAAAEYPGQVGVQIGYHEAFSH 361 (485)
T ss_dssp SCEEEEEEEESG--GGCHHHHHHHHHHHHHTTCEEEE-EEEEC-------HHHHHHHHHHHHHSTTTEEEEESCCHHHHH
T ss_pred CeEEEEeccCcc--ccCHHHHHHHHHHHhhCCcEEEE-EeCCc-------hHHHHHHHHHHHhCCCcEEEeCCCCHHHHH
Confidence 346666777653 34445555555443 444433 33221 00112222 22235665 5677332 2
Q ss_pred hhhcCCCCCCcccc----cChhHHHHHHhhCCcccccCccchhhHHHHHHHhhh---------ccceecCCCCCHHHHHH
Q 012735 334 EVLAHPAVGAFWTH----NGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVW---------KVGLQLENGLKREEIEK 400 (457)
Q Consensus 334 ~lL~~~~~~~~I~h----gG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~l---------G~g~~l~~~~~~~~l~~ 400 (457)
.+++.+++ +|.- |...++.||+.+|+|+|+.... ...+.+.+ - +.|..++. -+++++++
T Consensus 362 ~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~g----g~~e~v~~-~~~~~~~~~~~~G~l~~~-~d~~~la~ 433 (485)
T 2qzs_A 362 RIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRTG----GLADTVSD-CSLENLADGVASGFVFED-SNAWSLLR 433 (485)
T ss_dssp HHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHCCB-CCHHHHHTTCCCBEEECS-SSHHHHHH
T ss_pred HHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCCC----Cccceecc-CccccccccccceEEECC-CCHHHHHH
Confidence 57888888 6632 3356899999999999987653 44454544 2 36777765 58999999
Q ss_pred HHHHHh---cccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcc
Q 012735 401 TIRRVM---VEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILSLE 450 (457)
Q Consensus 401 ai~~il---~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (457)
+|.+++ +| +..+++..+ ..+. +..+.+..++.+++.+++..
T Consensus 434 ~i~~ll~~~~~---~~~~~~~~~---~~~~---~~fs~~~~~~~~~~ly~~~~ 477 (485)
T 2qzs_A 434 AIRRAFVLWSR---PSLWRFVQR---QAMA---MDFSWQVAAKSYRELYYRLK 477 (485)
T ss_dssp HHHHHHHHHTS---HHHHHHHHH---HHHH---CCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCC---HHHHHHHHH---HHHh---hcCCHHHHHHHHHHHHHHhh
Confidence 999999 66 443333222 2221 56778888888888887653
No 46
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.46 E-value=3.2e-07 Score=77.30 Aligned_cols=127 Identities=12% Similarity=0.051 Sum_probs=86.1
Q ss_pred EEEEecccccCCHHHHHHHHHHHhhC-CCCeEEEECCCCCCCCCCCCCCchhHH---HhhcCCCccccccCh---Hhhhc
Q 012735 265 IYVSFGSIAAVSEAEFLEIAWGLANC-KLPFLWVVRPGLTRGSDCLEPLPSGFM---EMVDGRGHLVKWAPQ---QEVLA 337 (457)
Q Consensus 265 v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~---~~~~~~~~~~~~vpq---~~lL~ 337 (457)
+++..|+.. +.+....++++++.. +.++++ ++.+.. ...+-+-+. ...++|+.+.+|+|+ ..+++
T Consensus 25 ~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i-~G~~~~-----~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~ 96 (177)
T 2f9f_A 25 FWLSVNRIY--PEKRIELQLEVFKKLQDEKLYI-VGWFSK-----GDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYS 96 (177)
T ss_dssp CEEEECCSS--GGGTHHHHHHHHHHCTTSCEEE-EBCCCT-----TSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHH
T ss_pred EEEEEeccc--cccCHHHHHHHHHhCCCcEEEE-EecCcc-----HHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHH
Confidence 455677776 345667788888877 445444 443320 111212111 123458889999997 46888
Q ss_pred CCCCCCccc---ccC-hhHHHHHHhhCCcccccCccchhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHhcc
Q 012735 338 HPAVGAFWT---HNG-WNSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVMVE 408 (457)
Q Consensus 338 ~~~~~~~I~---hgG-~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~~ 408 (457)
.+++ +|. +.| ..++.||+.+|+|+|+... ..+...+.+. +.|..+ . -+.+++.++|.++++|
T Consensus 97 ~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~-~d~~~l~~~i~~l~~~ 162 (177)
T 2f9f_A 97 RCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-N-ADVNEIIDAMKKVSKN 162 (177)
T ss_dssp HCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-C-SCHHHHHHHHHHHHHC
T ss_pred hCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-C-CCHHHHHHHHHHHHhC
Confidence 8888 775 334 4599999999999998754 4566667663 678777 4 6899999999999988
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.41 E-value=3.1e-05 Score=73.43 Aligned_cols=95 Identities=16% Similarity=0.197 Sum_probs=70.5
Q ss_pred CccccccCh-HhhhcCCCCCCcccc-----cChhHHHHHHhhCCcccccCccchhhHHHHHHHhhhccceecCCCCCHHH
Q 012735 324 GHLVKWAPQ-QEVLAHPAVGAFWTH-----NGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREE 397 (457)
Q Consensus 324 ~~~~~~vpq-~~lL~~~~~~~~I~h-----gG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~ 397 (457)
+++.++... ..+++.+++ ++.- +|..++.||+++|+|+|+-|...+..+....+.+. |.++.. -++++
T Consensus 262 v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~---~d~~~ 335 (374)
T 2xci_A 262 VILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEV---KNETE 335 (374)
T ss_dssp EEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEEC---CSHHH
T ss_pred EEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEe---CCHHH
Confidence 344454443 458888887 5541 23478999999999999888877777777776664 776655 37899
Q ss_pred HHHHHHHHhcccc-hHHHHHHHHHHHHHH
Q 012735 398 IEKTIRRVMVEKQ-GEEIRSRIFRLKEKA 425 (457)
Q Consensus 398 l~~ai~~il~~~~-~~~~~~~a~~l~~~~ 425 (457)
|++++.++++| + +..+.+++++..+.-
T Consensus 336 La~ai~~ll~d-~~r~~mg~~ar~~~~~~ 363 (374)
T 2xci_A 336 LVTKLTELLSV-KKEIKVEEKSREIKGCY 363 (374)
T ss_dssp HHHHHHHHHHS-CCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhH-HHHHHHHHHHHHHHHhc
Confidence 99999999988 5 677888888877664
No 48
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.00 E-value=0.00012 Score=75.41 Aligned_cols=172 Identities=16% Similarity=0.186 Sum_probs=109.5
Q ss_pred CCCcEEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCCCCchhHHHhh------cCCCccccccChH
Q 012735 260 APKSVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLEPLPSGFMEMV------DGRGHLVKWAPQQ 333 (457)
Q Consensus 260 ~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~------~~~~~~~~~vpq~ 333 (457)
+++.+||.||.......++.+....+.|++.+.-++|....... ..+++.+.+ ++++.+.+..|..
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~--------~~~~l~~~~~~~gi~~~r~~f~~~~~~~ 591 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV--------GEPNIQQYAQNMGLPQNRIIFSPVAPKE 591 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGG--------GHHHHHHHHHHTTCCGGGEEEEECCCHH
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH--------HHHHHHHHHHhcCCCcCeEEECCCCCHH
Confidence 35579999999888899999999999999998888888765421 113333322 2455667778854
Q ss_pred h---hhcCCCCCCccc---ccChhHHHHHHhhCCcccccCccch-hhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHh
Q 012735 334 E---VLAHPAVGAFWT---HNGWNSTLESICEGIPMICMPCFTD-QKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVM 406 (457)
Q Consensus 334 ~---lL~~~~~~~~I~---hgG~~s~~eal~~gvP~v~~P~~~D-Q~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il 406 (457)
+ .+..+|+ ++- .+|.+|++|||++|||+|.++-..= -..-+..+.. +|+.-.+.. +.++-.+.--++-
T Consensus 592 ~~l~~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~-~gl~e~ia~--~~~~Y~~~a~~la 666 (723)
T 4gyw_A 592 EHVRRGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTC-LGCLELIAK--NRQEYEDIAVKLG 666 (723)
T ss_dssp HHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHH-HTCGGGBCS--SHHHHHHHHHHHH
T ss_pred HHHHHhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHH-cCCcccccC--CHHHHHHHHHHHh
Confidence 4 5556666 654 7889999999999999999995321 2222334455 577655433 5555444444565
Q ss_pred cccchHHHHHHHH-HHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 012735 407 VEKQGEEIRSRIF-RLKEKANHSWKQGRSSFESINSLVTHILSL 449 (457)
Q Consensus 407 ~~~~~~~~~~~a~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (457)
+| ...+++.+ +|++.... .+.......+..+++.++++
T Consensus 667 ~d---~~~l~~lr~~l~~~~~~--s~l~d~~~~~~~le~a~~~~ 705 (723)
T 4gyw_A 667 TD---LEYLKKVRGKVWKQRIS--SPLFNTKQYTMELERLYLQM 705 (723)
T ss_dssp HC---HHHHHHHHHHHHHHHHH--SSTTCHHHHHHHHHHHHHHH
T ss_pred cC---HHHHHHHHHHHHHHHHh--CcCcCHHHHHHHHHHHHHHH
Confidence 66 33322221 22222221 13455677788888777765
No 49
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.93 E-value=3.2e-05 Score=63.92 Aligned_cols=142 Identities=13% Similarity=0.164 Sum_probs=85.9
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHhhCC--CCeEEE-ECCCCCCCCCCCCCCchhHH---HhhcCCCccccccChH---
Q 012735 263 SVIYVSFGSIAAVSEAEFLEIAWGLANCK--LPFLWV-VRPGLTRGSDCLEPLPSGFM---EMVDGRGHLVKWAPQQ--- 333 (457)
Q Consensus 263 ~vv~vs~Gs~~~~~~~~~~~~~~al~~~~--~~~i~~-~~~~~~~~~~~~~~lp~~~~---~~~~~~~~~~~~vpq~--- 333 (457)
+++++..|+.. +.+....++++++.+. .++-+. ++.+. ..+.+. +....++.+ +|+|+.
T Consensus 2 ~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~---------~~~~~~~~~~~~~~~v~~-g~~~~~~~~ 69 (166)
T 3qhp_A 2 PFKIAMVGRYS--NEKNQSVLIKAVALSKYKQDIVLLLKGKGP---------DEKKIKLLAQKLGVKAEF-GFVNSNELL 69 (166)
T ss_dssp CEEEEEESCCS--TTTTHHHHHHHHHTCTTGGGEEEEEECCST---------THHHHHHHHHHHTCEEEC-CCCCHHHHH
T ss_pred ceEEEEEeccc--hhcCHHHHHHHHHHhccCCCeEEEEEeCCc---------cHHHHHHHHHHcCCeEEE-eecCHHHHH
Confidence 56777888876 3456677788887653 233333 33321 122222 223346677 999964
Q ss_pred hhhcCCCCCCccc----ccChhHHHHHHhhCC-cccccCccchhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHhcc
Q 012735 334 EVLAHPAVGAFWT----HNGWNSTLESICEGI-PMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVMVE 408 (457)
Q Consensus 334 ~lL~~~~~~~~I~----hgG~~s~~eal~~gv-P~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~~ 408 (457)
.++..+++ +|. -|...++.||+.+|+ |+|+....+ .....+.+. +. .+.. -+++++.++|.++++|
T Consensus 70 ~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~---~~~~~~~~~-~~--~~~~-~~~~~l~~~i~~l~~~ 140 (166)
T 3qhp_A 70 EILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLS---ATRQFALDE-RS--LFEP-NNAKDLSAKIDWWLEN 140 (166)
T ss_dssp HHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTC---GGGGGCSSG-GG--EECT-TCHHHHHHHHHHHHHC
T ss_pred HHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCC---chhhhccCC-ce--EEcC-CCHHHHHHHHHHHHhC
Confidence 47888887 775 244569999999996 999943221 112222331 22 3333 5899999999999998
Q ss_pred cc-hHHHHHHHHHHHHHH
Q 012735 409 KQ-GEEIRSRIFRLKEKA 425 (457)
Q Consensus 409 ~~-~~~~~~~a~~l~~~~ 425 (457)
.+ ...+.+++++..+.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~ 158 (166)
T 3qhp_A 141 KLERERMQNEYAKSALNY 158 (166)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHC
Confidence 32 345556666555444
No 50
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.75 E-value=0.00019 Score=61.12 Aligned_cols=77 Identities=12% Similarity=0.090 Sum_probs=59.5
Q ss_pred CCcc-ccccChH---hhhcCCCCCCcccc----cChhHHHHHHhhCCcccccCccchhhHHHHHHHhhhccceecCCCCC
Q 012735 323 RGHL-VKWAPQQ---EVLAHPAVGAFWTH----NGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLK 394 (457)
Q Consensus 323 ~~~~-~~~vpq~---~lL~~~~~~~~I~h----gG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~ 394 (457)
++.+ .+++|+. .++..+++ +|.- |...++.||+.+|+|+|+.... .....+ .. +.|...+. -+
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~-~~-~~g~~~~~-~~ 166 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-TN-ETGILVKA-GD 166 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC-CT-TTCEEECT-TC
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc-CC-CceEEecC-CC
Confidence 7888 8999954 57888888 6643 2357899999999999887543 455555 53 67877765 58
Q ss_pred HHHHHHHHHHHhc-c
Q 012735 395 REEIEKTIRRVMV-E 408 (457)
Q Consensus 395 ~~~l~~ai~~il~-~ 408 (457)
.+++.++|.++++ |
T Consensus 167 ~~~l~~~i~~l~~~~ 181 (200)
T 2bfw_A 167 PGELANAILKALELS 181 (200)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhcC
Confidence 9999999999998 8
No 51
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.41 E-value=0.0038 Score=58.30 Aligned_cols=105 Identities=13% Similarity=0.077 Sum_probs=72.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCCCCCCCCCCCCee-EEecCCCCCCCCCCccCHHHHHHHH
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQ--GFTITIIHTSFNSPNPSSHPHLT-FHFIQENLSASEASTDDLVAFVSLL 81 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~~~~~~~~~~~~g~~-~~~i~~~~~~~~~~~~~~~~~~~~~ 81 (457)
+.+||+++-..+.|++.-..++.++|+++ +.+|++++.+.........+.++ ++.++.. .....+.
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~p~vd~vi~~~~~---------~~~~~~~-- 75 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYNPNIDELIVVDKK---------GRHNSIS-- 75 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSCTTCSEEEEECCS---------SHHHHHH--
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCCccEEEEeCcc---------cccccHH--
Confidence 56899999999999999999999999998 99999999975555555445664 5555421 1111111
Q ss_pred HHhcchhHHHHHHHHhhccCCCCe-eEEEeCCCcchHHHHHhHcCCCeEE
Q 012735 82 NTKCLVPFRDCLAKLLADVEEEPI-ACLISDAMLPFTQAVADSLKLPRIV 130 (457)
Q Consensus 82 ~~~~~~~~~~~l~~l~~~~~~~~p-Dlvi~D~~~~~~~~~A~~l~iP~v~ 130 (457)
.+..++.++.+. ++ |++|.=....-...++...|+|..+
T Consensus 76 ------~~~~l~~~Lr~~----~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 76 ------GLNEVAREINAK----GKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp ------HHHHHHHHHHHH----CCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred ------HHHHHHHHHhhC----CCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 112344455544 89 9999655455566788888999755
No 52
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.40 E-value=0.0018 Score=64.17 Aligned_cols=133 Identities=8% Similarity=0.049 Sum_probs=87.4
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEE--CCCCCCCCCCCCCCchhHHH-----hhcCCCccccccChHh-
Q 012735 263 SVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVV--RPGLTRGSDCLEPLPSGFME-----MVDGRGHLVKWAPQQE- 334 (457)
Q Consensus 263 ~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~--~~~~~~~~~~~~~lp~~~~~-----~~~~~~~~~~~vpq~~- 334 (457)
.++|.+|++.....++.++...+.+++.+..++|.. +... + .-.+..+ -..+++.+.+.+|+.+
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~--g------~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~ 512 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN--G------ITHPYVERFIKSYLGDSATAHPHSPYHQY 512 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC--G------GGHHHHHHHHHHHHGGGEEEECCCCHHHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc--h------hhHHHHHHHHHcCCCccEEEcCCCCHHHH
Confidence 689999998888889999999999998887777643 3211 0 1112211 1235667778888654
Q ss_pred --hhcCCCCCCcc---cccChhHHHHHHhhCCcccccCccchhhHHH-HHHHhhhcccee-cCCCCCHHHHHHHHHHHhc
Q 012735 335 --VLAHPAVGAFW---THNGWNSTLESICEGIPMICMPCFTDQKVNA-RYVSDVWKVGLQ-LENGLKREEIEKTIRRVMV 407 (457)
Q Consensus 335 --lL~~~~~~~~I---~hgG~~s~~eal~~gvP~v~~P~~~DQ~~na-~~v~~~lG~g~~-l~~~~~~~~l~~ai~~il~ 407 (457)
.+..+|+ |+ ..+|..|++|||++|||+|..+-..=.-..+ ..+.. +|+.-. +. -+.++..+...++.+
T Consensus 513 la~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA--~d~eeYv~~Av~La~ 587 (631)
T 3q3e_A 513 LRILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIA--NTVDEYVERAVRLAE 587 (631)
T ss_dssp HHHHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEE--SSHHHHHHHHHHHHH
T ss_pred HHHHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceec--CCHHHHHHHHHHHhC
Confidence 4577777 44 3477899999999999999987542111122 22334 365432 32 367888777778888
Q ss_pred c
Q 012735 408 E 408 (457)
Q Consensus 408 ~ 408 (457)
|
T Consensus 588 D 588 (631)
T 3q3e_A 588 N 588 (631)
T ss_dssp C
T ss_pred C
Confidence 8
No 53
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.31 E-value=0.0016 Score=60.78 Aligned_cols=103 Identities=11% Similarity=0.003 Sum_probs=64.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCCCCCCCCCCCCe-eEEecCCCCCCCCCCccCHHHHHHHHHH
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQ--GFTITIIHTSFNSPNPSSHPHL-TFHFIQENLSASEASTDDLVAFVSLLNT 83 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~~~~~~~~~~~~g~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 83 (457)
|||+++.....|++.-..++.++|+++ +.+|++++.+.........+.+ +++.++.. .. ..
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~p~i~~v~~~~~~--------~~----~~---- 64 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLG--------HG----AL---- 64 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTCTTEEEEEEC-----------------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCccCEEEEecCC--------cc----cc----
Confidence 589999988889999999999999997 9999999986433333332444 34444310 00 00
Q ss_pred hcchhHHHHHHHHhhccCCCCeeEEEeCCCcchHHHHHhHcCCCeEE
Q 012735 84 KCLVPFRDCLAKLLADVEEEPIACLISDAMLPFTQAVADSLKLPRIV 130 (457)
Q Consensus 84 ~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~l~iP~v~ 130 (457)
....+.++...+.+. ++|++|.-....-...++...|+|...
T Consensus 65 -~~~~~~~l~~~l~~~----~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 65 -EIGERRKLGHSLREK----RYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -CHHHHHHHHHHTTTT----TCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred -chHHHHHHHHHHHhc----CCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 001122344444433 899999332335566778888999743
No 54
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.17 E-value=0.00051 Score=63.79 Aligned_cols=110 Identities=15% Similarity=0.244 Sum_probs=79.7
Q ss_pred CCccccccChHhh---hcCCCCCCcccccCh---------hHHHHHHhhCCcccccCccchhhHHHHHHHhhhccceecC
Q 012735 323 RGHLVKWAPQQEV---LAHPAVGAFWTHNGW---------NSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVGLQLE 390 (457)
Q Consensus 323 ~~~~~~~vpq~~l---L~~~~~~~~I~hgG~---------~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~ 390 (457)
|+.+.+|+|+.++ |+.++.+++.+-+.. +-+.|+|++|+|+|+.+ ...++..+++. |+|...+
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC
Confidence 5588999998764 545555445533332 35889999999999754 55788889996 9999886
Q ss_pred CCCCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 012735 391 NGLKREEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTH 445 (457)
Q Consensus 391 ~~~~~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~ 445 (457)
+.+++.+++..+..+ +...+++|+++.+++++ .+.-.++++.+.+..
T Consensus 290 ---~~~e~~~~i~~l~~~-~~~~m~~na~~~a~~~~----~~~f~k~~l~~~~~~ 336 (339)
T 3rhz_A 290 ---DVEEAIMKVKNVNED-EYIELVKNVRSFNPILR----KGFFTRRLLTESVFQ 336 (339)
T ss_dssp ---SHHHHHHHHHHCCHH-HHHHHHHHHHHHTHHHH----TTHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHH
Confidence 467888888876533 45789999999999988 555566666555443
No 55
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=95.58 E-value=0.028 Score=55.61 Aligned_cols=166 Identities=13% Similarity=0.090 Sum_probs=96.3
Q ss_pred EEEEEecccccCCHHHHHHHHHHHhh---CCCCeEEEECCCCCCCCCCCCCCchhHHHhhcCCCccccccChH---hhhc
Q 012735 264 VIYVSFGSIAAVSEAEFLEIAWGLAN---CKLPFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQ---EVLA 337 (457)
Q Consensus 264 vv~vs~Gs~~~~~~~~~~~~~~al~~---~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~---~lL~ 337 (457)
.+++..|... +.+.+..+++|+.. .+.++++...+... ....-.......+.++.+....+.. .+++
T Consensus 328 p~i~~vgRl~--~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 400 (536)
T 3vue_A 328 PLIAFIGRLE--EQKGPDVMAAAIPELMQEDVQIVLLGTGKKK-----FEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMA 400 (536)
T ss_dssp CEEEEECCBS--GGGCHHHHHHHHHHHTTSSCEEEEECCBCHH-----HHHHHHHHHHHSTTTEEEECSCCHHHHHHHHH
T ss_pred cEEEEEeecc--ccCChHHHHHHHHHhHhhCCeEEEEeccCch-----HHHHHHHHHhhcCCceEEEEeccHHHHHHHHH
Confidence 3555567776 34555666666654 34454444332210 0000012223345666776666653 4777
Q ss_pred CCCCCCccccc---Ch-hHHHHHHhhCCcccccCccchhhHHHHHHHhhhccceecCC---------CCCHHHHHHHHHH
Q 012735 338 HPAVGAFWTHN---GW-NSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVGLQLEN---------GLKREEIEKTIRR 404 (457)
Q Consensus 338 ~~~~~~~I~hg---G~-~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~---------~~~~~~l~~ai~~ 404 (457)
.+++ ||.-. |. .+++||+++|+|+|+.... ...+.|.+. .-|..... ..+++.|+++|++
T Consensus 401 ~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~r 473 (536)
T 3vue_A 401 GADV--LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLKR 473 (536)
T ss_dssp HCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHHH
T ss_pred hhhe--eecccccCCCCHHHHHHHHcCCCEEEcCCC----CchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHHH
Confidence 7887 76432 33 4899999999999987653 455555552 34443221 2467889999998
Q ss_pred HhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcc
Q 012735 405 VMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILSLE 450 (457)
Q Consensus 405 il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (457)
+++..+.+.+++. .++++.+..|.++.+++.++.+++..
T Consensus 474 al~~~~~~~~~~~-------~~~am~~~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 474 AIKVVGTPAYEEM-------VRNCMNQDLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp HHHHTTSHHHHHH-------HHHHHHSCCSSHHHHHHHHHHHHTTC
T ss_pred HHHhcCcHHHHHH-------HHHHHHhcCCHHHHHHHHHHHHHHhh
Confidence 8753111333322 22333467889999999999988863
No 56
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=95.52 E-value=0.049 Score=50.04 Aligned_cols=49 Identities=14% Similarity=0.145 Sum_probs=39.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCCCCCCCCCCCCe
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQ--GFTITIIHTSFNSPNPSSHPHL 55 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~~~~~~~~~~~~g~ 55 (457)
|||+++-..+.|++.-..++.++|+++ +.++++++.+.........+.+
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~p~v 51 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWHAAV 51 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHTSTTE
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhcCCCC
Confidence 589999999999999999999999998 9999999987443333322344
No 57
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=94.31 E-value=0.032 Score=53.24 Aligned_cols=84 Identities=15% Similarity=0.070 Sum_probs=56.3
Q ss_pred CCCccccccChH---hhhcCCCCCCccccc---C-hhHHHHHHhhCCcccccCccchhhHHHHHHHhhhccceecCCCCC
Q 012735 322 GRGHLVKWAPQQ---EVLAHPAVGAFWTHN---G-WNSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLK 394 (457)
Q Consensus 322 ~~~~~~~~vpq~---~lL~~~~~~~~I~hg---G-~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~ 394 (457)
.++.+.+++|+. ++++.+++ ||.-. | ..++.||+++|+|+|+ -..+ ....+++. ..|+.++. -+
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~-~d 365 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQ-LN 365 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESS-CS
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCC-CC
Confidence 345788999865 47888888 76422 3 3578999999999997 2222 12334442 46777765 58
Q ss_pred HHHHHHHHHHHhcccchHHHHHH
Q 012735 395 REEIEKTIRRVMVEKQGEEIRSR 417 (457)
Q Consensus 395 ~~~l~~ai~~il~~~~~~~~~~~ 417 (457)
+++++++|.++++| +..+++
T Consensus 366 ~~~la~ai~~ll~~---~~~~~~ 385 (413)
T 2x0d_A 366 PENIAETLVELCMS---FNNRDV 385 (413)
T ss_dssp HHHHHHHHHHHHHH---TC----
T ss_pred HHHHHHHHHHHHcC---HHHHHH
Confidence 99999999999998 444443
No 58
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=92.77 E-value=0.36 Score=42.05 Aligned_cols=46 Identities=15% Similarity=0.007 Sum_probs=30.3
Q ss_pred CCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCC
Q 012735 1 MDQRKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPN 48 (457)
Q Consensus 1 ~~~~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~ 48 (457)
|+.+++||||+.==-+. |---..+|+++|.+ +|+|+++.+..+.+-
T Consensus 6 ~~~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg 51 (261)
T 3ty2_A 6 KTATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSG 51 (261)
T ss_dssp -----CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTT
T ss_pred hccCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcC
Confidence 34456789888765444 44457788888887 899999999755543
No 59
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=90.45 E-value=0.31 Score=48.13 Aligned_cols=42 Identities=12% Similarity=0.238 Sum_probs=30.5
Q ss_pred CCCcEEEEEcCCC------ccCHHHHHHHHHHHHHCCCeEEEEeCCCC
Q 012735 4 RKGRRLVLFPLPL------QGHISPMLQLANILHSQGFTITIIHTSFN 45 (457)
Q Consensus 4 ~~~~~il~~~~~~------~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~ 45 (457)
+++||||++++-. .|=-.-.-+|+++|+++||+|+++++.+.
T Consensus 7 ~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~ 54 (536)
T 3vue_A 7 HHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYD 54 (536)
T ss_dssp -CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCS
T ss_pred CCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCch
Confidence 3589999997431 12113466899999999999999997643
No 60
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=89.93 E-value=1.5 Score=43.94 Aligned_cols=107 Identities=13% Similarity=0.014 Sum_probs=62.0
Q ss_pred cccCh---------HhhhcCCCCCCccccc---C-hhHHHHHHhhCCcccccCccchhhHHHHHHHhh------hcccee
Q 012735 328 KWAPQ---------QEVLAHPAVGAFWTHN---G-WNSTLESICEGIPMICMPCFTDQKVNARYVSDV------WKVGLQ 388 (457)
Q Consensus 328 ~~vpq---------~~lL~~~~~~~~I~hg---G-~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~------lG~g~~ 388 (457)
.|++. .++++.+++ ||.-. | ..+.+||+++|+|+|+.-..+ ....|.+. -+.|+.
T Consensus 499 ~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG----~~d~V~dg~~~~~~~~tG~l 572 (725)
T 3nb0_A 499 EFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVSG----FGSYMEDLIETNQAKDYGIY 572 (725)
T ss_dssp SCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTBH----HHHHHHTTSCHHHHHHTTEE
T ss_pred cccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCCC----hhhhhhccccccCCCCceEE
Confidence 77775 357888888 77543 3 359999999999999866542 22233220 135655
Q ss_pred cC-C-CCCHHHHHHHHHHHh----c-cc-chHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 012735 389 LE-N-GLKREEIEKTIRRVM----V-EK-QGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILS 448 (457)
Q Consensus 389 l~-~-~~~~~~l~~ai~~il----~-~~-~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (457)
+. . ..+++++.++|.+++ . ++ .+..++++++++++. .+.++.+++.++..++
T Consensus 573 V~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~--------FSWe~iA~~Yl~~Ye~ 632 (725)
T 3nb0_A 573 IVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDL--------LDWKRMGLEYVKARQL 632 (725)
T ss_dssp EECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGG--------GBHHHHHHHHHHHHHH
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh--------CCHHHHHHHHHHHHHH
Confidence 53 2 446666555555554 2 31 134455555555444 3466666666655543
No 61
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=88.95 E-value=3.5 Score=35.70 Aligned_cols=110 Identities=14% Similarity=0.103 Sum_probs=59.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCC----CCCeeEEecCCCCCCCCCCccCHHHHHHHHH
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSS----HPHLTFHFIQENLSASEASTDDLVAFVSLLN 82 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~----~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 82 (457)
||||+.==-+. |---+.+|+++|.+.| +|+++.+..+.+-... ...+++..+..+.. ..-...+..-...
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~sit~~~pl~~~~~~~~~~--~~v~GTPaDCV~l-- 75 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDFY--TVIDGTPADCVHL-- 75 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTEE--EETTCCHHHHHHH--
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccceecCCCeEEEEecCCCe--EEECCCHHHHHHH--
Confidence 67776654443 3345788899999988 9999999755433321 13455555443210 1111111111110
Q ss_pred HhcchhHHHHHHHHhhccCCCCeeEEEeCCC----------c---chHHHHHhHcCCCeEEEecc
Q 012735 83 TKCLVPFRDCLAKLLADVEEEPIACLISDAM----------L---PFTQAVADSLKLPRIVLRTG 134 (457)
Q Consensus 83 ~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~----------~---~~~~~~A~~l~iP~v~~~~~ 134 (457)
.+..++.. . +||+||+..- . ..+..-|..+|||.|.++..
T Consensus 76 ---------al~~l~~~--~-~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (251)
T 2phj_A 76 ---------GYRVILEE--K-KPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp ---------HHHTTTTT--C-CCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ---------HHHHhcCC--C-CCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEcC
Confidence 12223221 1 8999997431 1 23344566789999998764
No 62
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=87.09 E-value=0.34 Score=46.13 Aligned_cols=40 Identities=35% Similarity=0.476 Sum_probs=31.3
Q ss_pred CCCcEEEEEcCCCc-----cCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 4 RKGRRLVLFPLPLQ-----GHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 4 ~~~~~il~~~~~~~-----gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
..+|||++++.... |=......+|++|+++||+|++++..
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~ 88 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTD 88 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESS
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEec
Confidence 46789988874421 33356889999999999999999985
No 63
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=86.46 E-value=4.3 Score=38.45 Aligned_cols=99 Identities=17% Similarity=0.201 Sum_probs=53.3
Q ss_pred CCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCCCCCccCHHHHHHH
Q 012735 1 MDQRKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSSHPHLTFHFIQENLSASEASTDDLVAFVSL 80 (457)
Q Consensus 1 ~~~~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~ 80 (457)
|+ ++++||+++..+... ..+.++.++.|++|+++.............--.++.++.. .+...++
T Consensus 1 M~-~~~k~l~Il~~~~~~-----~~i~~aa~~lG~~vv~v~~~~~~~~~~~~~~d~~~~~~~~--------~d~~~~~-- 64 (425)
T 3vot_A 1 MT-KRNKNLAIICQNKHL-----PFIFEEAERLGLKVTFFYNSAEDFPGNLPAVERCVPLPLF--------EDEEAAM-- 64 (425)
T ss_dssp -C-CCCCEEEEECCCTTC-----CHHHHHHHHTTCEEEEEEETTSCCCCSCTTEEEEEEECTT--------TCHHHHH--
T ss_pred CC-CCCcEEEEECCChhH-----HHHHHHHHHCCCEEEEEECCCcccccCHhhccEEEecCCC--------CCHHHHH--
Confidence 55 577888888755432 2357888899999999876422211111011134444311 1121211
Q ss_pred HHHhcchhHHHHHHHHhhccCCCCeeEEEeC--CCcchHHHHHhHcCCCe
Q 012735 81 LNTKCLVPFRDCLAKLLADVEEEPIACLISD--AMLPFTQAVADSLKLPR 128 (457)
Q Consensus 81 ~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D--~~~~~~~~~A~~l~iP~ 128 (457)
+.+.++.++. ++|.|++- .....+..+|+.+|+|.
T Consensus 65 ----------~~~~~~~~~~---~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 65 ----------DVVRQTFVEF---PFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp ----------HHHHHHHHHS---CCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred ----------HHHHHhhhhc---CCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 1223333332 88999853 22345567889999995
No 64
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=86.17 E-value=7.1 Score=33.67 Aligned_cols=54 Identities=7% Similarity=-0.048 Sum_probs=33.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCC----CCCeeEEecCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSS----HPHLTFHFIQE 62 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~----~~g~~~~~i~~ 62 (457)
||||+.==-+. |---+.+|+++|.+.| +|+++.+..+.+-... ...+++..++.
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~ 58 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAITIAHPVRAYPHPS 58 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSCCCSSCBEEEECCC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEecc
Confidence 35555433332 2233778899999988 8999999755433321 24566766654
No 65
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=85.16 E-value=1.3 Score=34.49 Aligned_cols=43 Identities=16% Similarity=0.296 Sum_probs=30.3
Q ss_pred CCCCCCcEEEEEc-CC-CccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 1 MDQRKGRRLVLFP-LP-LQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 1 ~~~~~~~~il~~~-~~-~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
|+.++.||++++- .| ..-.+.-.+=++..|.++||+|++++.+
T Consensus 1 ~~~~~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~np 45 (157)
T 1kjn_A 1 MKTESTGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANP 45 (157)
T ss_dssp -----CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred CccccceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCH
Confidence 5556777765554 44 4466777888999999999999999987
No 66
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=84.84 E-value=14 Score=29.90 Aligned_cols=139 Identities=14% Similarity=0.146 Sum_probs=81.1
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCCCC
Q 012735 263 SVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVG 342 (457)
Q Consensus 263 ~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~ 342 (457)
|+|-|-+||.. +....++....++..+...-+.+... .++|+.+.+... + .....++
T Consensus 14 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa--------HR~p~~l~~~~~----------~---a~~~g~~ 70 (183)
T 1o4v_A 14 PRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSA--------HRTPDRMFEYAK----------N---AEERGIE 70 (183)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCT--------TTCHHHHHHHHH----------H---TTTTTCC
T ss_pred CeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc--------cCCHHHHHHHHH----------H---HHhCCCc
Confidence 67888889888 57788888999999888877777553 457777632111 0 0111222
Q ss_pred CcccccCh----hHHHHHHhhCCcccccCccchh-hHHHHH--HHhhh--ccceec---CCCCCHHHHHHHHHHHhcccc
Q 012735 343 AFWTHNGW----NSTLESICEGIPMICMPCFTDQ-KVNARY--VSDVW--KVGLQL---ENGLKREEIEKTIRRVMVEKQ 410 (457)
Q Consensus 343 ~~I~hgG~----~s~~eal~~gvP~v~~P~~~DQ-~~na~~--v~~~l--G~g~~l---~~~~~~~~l~~ai~~il~~~~ 410 (457)
.+|.-.|. .++..++ .-+|+|.+|..... ...... +.. . |+.+.. +...++.-++..|- -+.|
T Consensus 71 ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivq-mP~GvpVatV~Id~~~nAa~lAaqIl-a~~d-- 145 (183)
T 1o4v_A 71 VIIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQ-MPGGVPVATVAINNAKNAGILAASIL-GIKY-- 145 (183)
T ss_dssp EEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTCCCEECCTTCHHHHHHHHHHHH-HTTC--
T ss_pred EEEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCeeEEEecCCchHHHHHHHHHH-hcCC--
Confidence 37776663 4555555 68999999986421 111121 222 2 432211 21334444554442 3456
Q ss_pred hHHHHHHHHHHHHHHHHHHh
Q 012735 411 GEEIRSRIFRLKEKANHSWK 430 (457)
Q Consensus 411 ~~~~~~~a~~l~~~~~~~~~ 430 (457)
+.++++.+..+++.+..+.
T Consensus 146 -~~l~~kL~~~r~~~~~~v~ 164 (183)
T 1o4v_A 146 -PEIARKVKEYKERMKREVL 164 (183)
T ss_dssp -HHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHH
Confidence 7888888888888775443
No 67
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=84.63 E-value=14 Score=29.58 Aligned_cols=140 Identities=14% Similarity=0.131 Sum_probs=81.1
Q ss_pred CcEEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCCC
Q 012735 262 KSVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAV 341 (457)
Q Consensus 262 ~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~ 341 (457)
+|.|-|-+||.. +....++....++..+...-+.+... .++|+.+.+.. -+ .....+
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa--------HR~p~~l~~~~----------~~---a~~~g~ 67 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA--------HRTPDYMFEYA----------ET---ARERGL 67 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTSHHHHHHHH----------HH---TTTTTC
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEec--------cCCHHHHHHHH----------HH---HHhCCC
Confidence 356778888888 57788888999999888877777653 45777763211 00 011112
Q ss_pred CCcccccCh----hHHHHHHhhCCcccccCccchh-hHHHHHHH--h--hhcccee---cCC--CCCHHHHHHHHHHHhc
Q 012735 342 GAFWTHNGW----NSTLESICEGIPMICMPCFTDQ-KVNARYVS--D--VWKVGLQ---LEN--GLKREEIEKTIRRVMV 407 (457)
Q Consensus 342 ~~~I~hgG~----~s~~eal~~gvP~v~~P~~~DQ-~~na~~v~--~--~lG~g~~---l~~--~~~~~~l~~ai~~il~ 407 (457)
+.+|.-.|. .++..++ .-+|+|.+|..... ......+. . . |+.+. +++ ..++.-++..|- -+.
T Consensus 68 ~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~ 144 (170)
T 1xmp_A 68 KVIIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQIL-GSF 144 (170)
T ss_dssp CEEEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHHHH-HTT
T ss_pred cEEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHHHH-ccC
Confidence 337776664 3455444 47899999986431 11111222 2 2 44321 221 134444444442 346
Q ss_pred ccchHHHHHHHHHHHHHHHHHHh
Q 012735 408 EKQGEEIRSRIFRLKEKANHSWK 430 (457)
Q Consensus 408 ~~~~~~~~~~a~~l~~~~~~~~~ 430 (457)
| +.++++.+..+++.++.+.
T Consensus 145 d---~~l~~kl~~~r~~~~~~v~ 164 (170)
T 1xmp_A 145 H---DDIHDALELRREAIEKDVR 164 (170)
T ss_dssp C---HHHHHHHHHHHHHHHHHHH
T ss_pred C---HHHHHHHHHHHHHHHHHHH
Confidence 6 7899999999998875443
No 68
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=84.25 E-value=3.3 Score=35.98 Aligned_cols=109 Identities=14% Similarity=0.099 Sum_probs=56.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCC----CCCeeEEecCCCCCCCCCCccCHHHHHHHHHH
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSS----HPHLTFHFIQENLSASEASTDDLVAFVSLLNT 83 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~----~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 83 (457)
|||+.==-+. +---+.+|+++|.+.| +|+++.+..+.+-... ...+++..+..... ..-...+..=...
T Consensus 3 ~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~~~~~--~~v~GTPaDCV~l--- 75 (251)
T 2wqk_A 3 TFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDFY--TVIDGTPADCVHL--- 75 (251)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTEE--EETTCCHHHHHHH---
T ss_pred EEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCcCCCCCceeEEeeccce--eecCCChHHHHhh---
Confidence 5555432222 2233677899999998 5999988755433321 13344444432100 0001111110000
Q ss_pred hcchhHHHHHHHHhhccCCCCeeEEEeCC----------C---cchHHHHHhHcCCCeEEEecc
Q 012735 84 KCLVPFRDCLAKLLADVEEEPIACLISDA----------M---LPFTQAVADSLKLPRIVLRTG 134 (457)
Q Consensus 84 ~~~~~~~~~l~~l~~~~~~~~pDlvi~D~----------~---~~~~~~~A~~l~iP~v~~~~~ 134 (457)
.+..++... +||+||+.. + +..+..-|..+|||.|.++..
T Consensus 76 --------al~~~l~~~---~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~ 128 (251)
T 2wqk_A 76 --------GYRVILEEK---KPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp --------HHHTTTTTC---CCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred --------hhhhhcCCC---CCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcc
Confidence 122223222 899999832 1 234555666789999998753
No 69
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=83.73 E-value=2.8 Score=34.91 Aligned_cols=99 Identities=10% Similarity=0.124 Sum_probs=60.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCC-C-----CCCCCCCCeeEEecCCCCCCCCCCccCHHHHH
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFN-S-----PNPSSHPHLTFHFIQENLSASEASTDDLVAFV 78 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~-~-----~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~ 78 (457)
.+..|++++..+.|-....+.+|-+.+.+|+.|.|+.---. . ....+ .+++++....++.. ...+...
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~-L~v~~~~~g~gf~~---~~~~~~~-- 100 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEP-HGVEFQVMATGFTW---ETQNREA-- 100 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGG-GTCEEEECCTTCCC---CGGGHHH--
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHh-CCcEEEEccccccc---CCCCcHH--
Confidence 35678888888899999999999999999999999964311 0 11222 25778877765432 1111111
Q ss_pred HHHHHhcchhHHHHHHHHhhccCCCCeeEEEeCCCcc
Q 012735 79 SLLNTKCLVPFRDCLAKLLADVEEEPIACLISDAMLP 115 (457)
Q Consensus 79 ~~~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~~ 115 (457)
-...+...+....+.+... ++|+||.|.+..
T Consensus 101 --~~~~a~~~l~~a~~~l~~~----~yDlvILDEi~~ 131 (196)
T 1g5t_A 101 --DTAACMAVWQHGKRMLADP----LLDMVVLDELTY 131 (196)
T ss_dssp --HHHHHHHHHHHHHHHTTCT----TCSEEEEETHHH
T ss_pred --HHHHHHHHHHHHHHHHhcC----CCCEEEEeCCCc
Confidence 1112233333333333222 899999998643
No 70
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=82.89 E-value=14 Score=31.93 Aligned_cols=53 Identities=11% Similarity=0.122 Sum_probs=31.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCC----CCCeeEEecC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSS----HPHLTFHFIQ 61 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~----~~g~~~~~i~ 61 (457)
||||+.==-+. |---+.+|+++|++.| +|+++.+..+.+-... ...+++..++
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~ 57 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSITIHVPLWMKKVF 57 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCCCSSCCCEEECC
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEec
Confidence 35555433232 2234778899999988 8999999755433321 1345555554
No 71
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=82.01 E-value=14 Score=32.08 Aligned_cols=38 Identities=11% Similarity=0.142 Sum_probs=29.5
Q ss_pred CCcEEEEEc-CC-CccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 5 KGRRLVLFP-LP-LQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 5 ~~~~il~~~-~~-~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
++++.+|++ .. +-|=..-.+.|++.|+++|++|.++=+
T Consensus 24 ~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKP 63 (251)
T 3fgn_A 24 SHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKP 63 (251)
T ss_dssp SSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEee
Confidence 455555554 44 349999999999999999999999753
No 72
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=81.34 E-value=2.2 Score=35.96 Aligned_cols=38 Identities=16% Similarity=0.127 Sum_probs=33.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+++||++.-.|+.|-+. ...|.+.|+++|++|.++.++
T Consensus 3 ~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~ 40 (209)
T 3zqu_A 3 GPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISK 40 (209)
T ss_dssp SCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECc
Confidence 55788888888877766 889999999999999999986
No 73
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=81.16 E-value=15 Score=31.67 Aligned_cols=36 Identities=11% Similarity=0.181 Sum_probs=28.0
Q ss_pred cEEEEEc-CC-CccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFP-LP-LQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~-~~-~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
++.+|++ .. .-|=..-.+.|++.|+++|.+|.++=+
T Consensus 21 ~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fKP 58 (242)
T 3qxc_A 21 GHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLKP 58 (242)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEee
Confidence 4444444 43 449999999999999999999999753
No 74
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=79.82 E-value=13 Score=32.87 Aligned_cols=40 Identities=10% Similarity=0.074 Sum_probs=26.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPN 48 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~ 48 (457)
||||+.==-+. +---+.+|+++|.+.| +|+++.+..+.+-
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg 40 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSA 40 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTT
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcC
Confidence 45555433332 2233778899999988 9999999755433
No 75
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=76.01 E-value=8.1 Score=35.25 Aligned_cols=39 Identities=15% Similarity=0.134 Sum_probs=32.3
Q ss_pred CCcEEEEEc-CCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFP-LPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~-~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++++|+|++ -|+-|-..-...+|..|+++|++|.++...
T Consensus 14 ~~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D 53 (334)
T 3iqw_A 14 RSLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTD 53 (334)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECC
T ss_pred CCeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 445565555 567799999999999999999999999986
No 76
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=75.81 E-value=3.1 Score=35.06 Aligned_cols=37 Identities=14% Similarity=0.091 Sum_probs=32.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSF 44 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 44 (457)
++||++...|+.+-+. ...+.+.|+++| +|.++.++.
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~ 55 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKS 55 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTG
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcch
Confidence 5789988888887766 899999999999 999999873
No 77
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=74.68 E-value=13 Score=31.74 Aligned_cols=24 Identities=21% Similarity=0.250 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHCCCeEEEEeCCC
Q 012735 21 SPMLQLANILHSQGFTITIIHTSF 44 (457)
Q Consensus 21 ~p~l~la~~L~~~Gh~Vt~~~~~~ 44 (457)
....++|++|+++|++|++++.+.
T Consensus 30 ~mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 30 HLGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCc
Confidence 356789999999999999999863
No 78
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=74.21 E-value=33 Score=27.74 Aligned_cols=140 Identities=10% Similarity=0.107 Sum_probs=81.0
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCCCC
Q 012735 263 SVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVG 342 (457)
Q Consensus 263 ~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~ 342 (457)
+.|-|-+||.. +....++....++..+...-+.+... +++|+.+.+.. -+ .....++
T Consensus 22 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa--------HR~p~~l~~~~----------~~---a~~~g~~ 78 (182)
T 1u11_A 22 PVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSA--------HRTPDRLADYA----------RT---AAERGLN 78 (182)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTCHHHHHHHH----------HH---TTTTTCC
T ss_pred CEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEcc--------cCCHHHHHHHH----------HH---HHhCCCc
Confidence 45777788888 56788888899999888877777653 45777763211 00 0111123
Q ss_pred CcccccCh----hHHHHHHhhCCcccccCccchhh-HHHHHH--Hh--hhcccee---cCC--CCCHHHHHHHHHHHhcc
Q 012735 343 AFWTHNGW----NSTLESICEGIPMICMPCFTDQK-VNARYV--SD--VWKVGLQ---LEN--GLKREEIEKTIRRVMVE 408 (457)
Q Consensus 343 ~~I~hgG~----~s~~eal~~gvP~v~~P~~~DQ~-~na~~v--~~--~lG~g~~---l~~--~~~~~~l~~ai~~il~~ 408 (457)
.+|.-.|. .++..++ .-+|+|.+|...... .....+ .. . |+.+. ++. ..+..-++..|- -+.|
T Consensus 79 ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d 155 (182)
T 1u11_A 79 VIIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPG-GVPVGTLAIGASGAKNAALLAASIL-ALYN 155 (182)
T ss_dssp EEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCT-TSCCEECCSSHHHHHHHHHHHHHHH-GGGC
T ss_pred EEEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCceEEEecCCccchHHHHHHHHHH-ccCC
Confidence 37776663 4555555 489999999864311 111112 22 2 44421 221 133444443332 3456
Q ss_pred cchHHHHHHHHHHHHHHHHHHhc
Q 012735 409 KQGEEIRSRIFRLKEKANHSWKQ 431 (457)
Q Consensus 409 ~~~~~~~~~a~~l~~~~~~~~~~ 431 (457)
+.++++.+..+++.++.+.+
T Consensus 156 ---~~l~~kL~~~r~~~~~~v~~ 175 (182)
T 1u11_A 156 ---PALAARLETWRALQTASVPN 175 (182)
T ss_dssp ---HHHHHHHHHHHHHHHHHSCS
T ss_pred ---HHHHHHHHHHHHHHHHHHHH
Confidence 78999999999988764443
No 79
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=73.84 E-value=4.9 Score=33.58 Aligned_cols=40 Identities=15% Similarity=-0.012 Sum_probs=32.8
Q ss_pred CCcEEEEEcCCCccCHH-HHHHHHHHHHHCCCeEEEEeCCCC
Q 012735 5 KGRRLVLFPLPLQGHIS-PMLQLANILHSQGFTITIIHTSFN 45 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~-p~l~la~~L~~~Gh~Vt~~~~~~~ 45 (457)
+++||++.-.|+ +... -.+.+.+.|+++|++|.++.++..
T Consensus 6 ~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A 46 (201)
T 3lqk_A 6 AGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTV 46 (201)
T ss_dssp TTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhH
Confidence 457888888887 4555 789999999999999999999743
No 80
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=73.59 E-value=3.3 Score=33.26 Aligned_cols=38 Identities=18% Similarity=0.309 Sum_probs=34.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
++.||++.+.++-.|-....-++..|...|++|..+..
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~ 54 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGL 54 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCS
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCC
Confidence 57889999999999999999999999999999998875
No 81
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=73.34 E-value=5.2 Score=30.91 Aligned_cols=39 Identities=10% Similarity=0.082 Sum_probs=29.0
Q ss_pred CCcEEEEEc-CC--CccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFP-LP--LQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~-~~--~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.++|++|+. .+ +.......+.+|...++.||+|+++...
T Consensus 14 ~~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~ 55 (134)
T 3mc3_A 14 QXXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMI 55 (134)
T ss_dssp CCCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred ccceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEe
Confidence 445665544 44 3467777888899999999999998875
No 82
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=72.70 E-value=4 Score=33.26 Aligned_cols=37 Identities=11% Similarity=0.056 Sum_probs=31.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSF 44 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 44 (457)
+||++.-.|+.|=+. ...+.+.|+++|++|.++.++.
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~ 42 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTN 42 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTG
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcC
Confidence 578888888766554 8899999999999999999873
No 83
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=72.56 E-value=29 Score=30.02 Aligned_cols=40 Identities=18% Similarity=0.182 Sum_probs=27.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPN 48 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~ 48 (457)
||||+.==-+. |---+.+|+++|++.| +|+++.+..+.+-
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg 41 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSG 41 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTT
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcC
Confidence 56666543333 3344778899998876 9999999755433
No 84
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=72.36 E-value=19 Score=29.60 Aligned_cols=36 Identities=19% Similarity=0.483 Sum_probs=29.3
Q ss_pred EEEEE-cCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 8 RLVLF-PLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 8 ~il~~-~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.|.|+ +-++-|=..-...||..|+++|++|.++-..
T Consensus 3 vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D 39 (206)
T 4dzz_A 3 VISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTD 39 (206)
T ss_dssp EEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 34444 3456699999999999999999999998875
No 85
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=72.29 E-value=4.8 Score=35.82 Aligned_cols=32 Identities=22% Similarity=0.378 Sum_probs=24.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|||++.... |.+ -..|+++|.++||+|+.++-
T Consensus 1 MkILVTGat--GfI--G~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGGGT--GFI--GTALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEETTT--SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC--CHH--HHHHHHHHHHCCCEEEEEEC
Confidence 687766543 433 35689999999999999875
No 86
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=71.80 E-value=5.8 Score=30.78 Aligned_cols=37 Identities=19% Similarity=0.205 Sum_probs=33.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.||++.+.++-.|-....-++..|..+|++|..+..
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~ 39 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGV 39 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCC
Confidence 4689999999889999999999999999999998876
No 87
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=70.87 E-value=30 Score=33.02 Aligned_cols=88 Identities=16% Similarity=0.151 Sum_probs=52.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCCCCCccCHHHHHHHHHHhc
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSSHPHLTFHFIQENLSASEASTDDLVAFVSLLNTKC 85 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (457)
.+|++++.. -.-.+.+++-|.+.|-+|..+.+........+.. . ......+..
T Consensus 313 Gkrv~i~~~-----~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~~-~-----------~~v~~~D~~---------- 365 (458)
T 3pdi_B 313 SARTAIAAD-----PDLLLGFDALLRSMGAHTVAAVVPARAAALVDSP-L-----------PSVRVGDLE---------- 365 (458)
T ss_dssp TCEEEEECC-----HHHHHHHHHHHHTTTCEEEEEEESSCCSCCTTTT-S-----------SCEEESHHH----------
T ss_pred CCEEEEECC-----cHHHHHHHHHHHHCCCEEEEEEECCCChhhhhCc-c-----------CcEEeCCHH----------
Confidence 467777533 2456789999999999999988754222111100 0 000000111
Q ss_pred chhHHHHHHHHhhccCCCCeeEEEeCCCcchHHHHHhHcCCCeEEEe
Q 012735 86 LVPFRDCLAKLLADVEEEPIACLISDAMLPFTQAVADSLKLPRIVLR 132 (457)
Q Consensus 86 ~~~~~~~l~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~l~iP~v~~~ 132 (457)
.+++.+.+. +||++|.+.. +..+|+++|||++.+.
T Consensus 366 --~le~~i~~~-------~pDllig~~~---~~~~a~k~gip~~~~g 400 (458)
T 3pdi_B 366 --DLEHAARAG-------QAQLVIGNSH---ALASARRLGVPLLRAG 400 (458)
T ss_dssp --HHHHHHHHH-------TCSEEEECTT---HHHHHHHTTCCEEECS
T ss_pred --HHHHHHHhc-------CCCEEEEChh---HHHHHHHcCCCEEEec
Confidence 122233333 9999999854 5679999999999853
No 88
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=70.67 E-value=4 Score=34.24 Aligned_cols=39 Identities=13% Similarity=0.058 Sum_probs=30.8
Q ss_pred CCcEEEEEcCCCccCHHH-HHHHHHHHHHCCCeEEEEeCCC
Q 012735 5 KGRRLVLFPLPLQGHISP-MLQLANILHSQGFTITIIHTSF 44 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p-~l~la~~L~~~Gh~Vt~~~~~~ 44 (457)
+++||++.-.|+ +..+- ...+.+.|+++|++|.++.++.
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~ 43 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYT 43 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC-
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehH
Confidence 456787777776 44554 7899999999999999999973
No 89
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=70.40 E-value=7.1 Score=34.11 Aligned_cols=40 Identities=10% Similarity=0.092 Sum_probs=36.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 4 RKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.++.+|++.+.++-.|-....-++..|..+|++|..+...
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 4578999999999999999999999999999999998864
No 90
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=69.49 E-value=5.7 Score=33.03 Aligned_cols=36 Identities=11% Similarity=0.091 Sum_probs=30.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHC-CCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQ-GFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~-Gh~Vt~~~~~ 43 (457)
|||++...|+.|-+. ...+.+.|+++ |++|.++.++
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~ 37 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSK 37 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECc
Confidence 478888888876655 89999999999 9999999886
No 91
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=69.35 E-value=6 Score=33.29 Aligned_cols=39 Identities=23% Similarity=0.140 Sum_probs=35.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++.+|++.+.++-.|-....-++..|..+|++|..+...
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~ 125 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVD 125 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSS
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 467899999999999999999999999999999998863
No 92
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=69.18 E-value=3.9 Score=36.84 Aligned_cols=38 Identities=11% Similarity=0.115 Sum_probs=29.7
Q ss_pred cE-EEEEcCCCccCH--------------HHHHHHHHHHHHCCCeEEEEeCCC
Q 012735 7 RR-LVLFPLPLQGHI--------------SPMLQLANILHSQGFTITIIHTSF 44 (457)
Q Consensus 7 ~~-il~~~~~~~gH~--------------~p~l~la~~L~~~Gh~Vt~~~~~~ 44 (457)
+| |++.+.|+.=.+ ....++|+++.++|++|++++.+.
T Consensus 37 k~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 37 RRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp CCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence 45 666666665555 267889999999999999999864
No 93
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=69.07 E-value=7.4 Score=33.15 Aligned_cols=40 Identities=25% Similarity=0.194 Sum_probs=35.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 4 RKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
..+.+|++...|+-|-..-++.+|.+|+++|++|.++...
T Consensus 4 ~g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D 43 (228)
T 2r8r_A 4 RGRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVE 43 (228)
T ss_dssp CCCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 3467889999999999999999999999999999888775
No 94
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=68.94 E-value=3.1 Score=32.25 Aligned_cols=38 Identities=13% Similarity=0.155 Sum_probs=25.9
Q ss_pred CCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 1 MDQRKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 1 ~~~~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
|+..++++|+++.. |. -...+|+.|.++||+|+++...
T Consensus 1 m~~~~~~~v~I~G~---G~--iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 1 MTENGRYEYIVIGS---EA--AGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp -----CCSEEEECC---SH--HHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCCCCCEEEEECC---CH--HHHHHHHHHHHCCCeEEEEECC
Confidence 44445568888865 33 3467999999999999998763
No 95
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=67.79 E-value=17 Score=32.65 Aligned_cols=35 Identities=17% Similarity=0.216 Sum_probs=26.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 4 RKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++++||+|+..+.++ ....++|.+.||+|..+.+.
T Consensus 1 s~~mrIvf~Gt~~fa-----~~~L~~L~~~~~~i~~Vvt~ 35 (314)
T 1fmt_A 1 SESLRIIFAGTPDFA-----ARHLDALLSSGHNVVGVFTQ 35 (314)
T ss_dssp CCCCEEEEEECSHHH-----HHHHHHHHHTTCEEEEEECC
T ss_pred CCCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEeC
Confidence 467999999876533 45567788889999877664
No 96
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=67.30 E-value=28 Score=33.62 Aligned_cols=111 Identities=10% Similarity=0.030 Sum_probs=69.5
Q ss_pred CCccccccChH---hhhcCCCCCCccc---ccChh-HHHHHHhhC---CcccccCccchhhHHHHHHHhhhccceecCCC
Q 012735 323 RGHLVKWAPQQ---EVLAHPAVGAFWT---HNGWN-STLESICEG---IPMICMPCFTDQKVNARYVSDVWKVGLQLENG 392 (457)
Q Consensus 323 ~~~~~~~vpq~---~lL~~~~~~~~I~---hgG~~-s~~eal~~g---vP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~ 392 (457)
.+++...+|+. +++..+++ |+. .=|+| +..|++++| .|+|+--.. ..+..+. .-|+.++.
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~a----Ga~~~l~---~~allVnP- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETC----GAAEVLG---EYCRSVNP- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTB----TTHHHHG---GGSEEECT-
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCC----CCHHHhC---CCEEEECC-
Confidence 45666778864 46777887 654 45777 568999986 555544332 2233232 23677766
Q ss_pred CCHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 012735 393 LKREEIEKTIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILSL 449 (457)
Q Consensus 393 ~~~~~l~~ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (457)
.+.++++++|.++|++.. +.-+++.+++.+.+. + .....-++.+++.|+.-
T Consensus 423 ~D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~----~-~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 423 FDLVEQAEAISAALAAGP-RQRAEAAARRRDAAR----P-WTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp TBHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHT----T-CBHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH----H-CCHHHHHHHHHHHHhhc
Confidence 689999999999998621 233444455555554 3 44667777777777653
No 97
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=67.12 E-value=15 Score=30.44 Aligned_cols=42 Identities=14% Similarity=0.110 Sum_probs=33.3
Q ss_pred hhHHHHHHHHhhccCCCCeeEEEeCCCcchHHHHHhHcCCCeEEEecch
Q 012735 87 VPFRDCLAKLLADVEEEPIACLISDAMLPFTQAVADSLKLPRIVLRTGG 135 (457)
Q Consensus 87 ~~~~~~l~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~l~iP~v~~~~~~ 135 (457)
......+.++.+. +.|+||.|. .+..+|+++|+|.+.+.++.
T Consensus 129 ~e~~~~i~~l~~~----G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 129 DEITTLISKVKTE----NIKIVVSGK---TVTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp GGHHHHHHHHHHT----TCCEEEECH---HHHHHHHHTTCEEEECCCCH
T ss_pred HHHHHHHHHHHHC----CCeEEECCH---HHHHHHHHcCCcEEEEecCH
Confidence 4456677888776 899999984 35789999999999987743
No 98
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=66.73 E-value=10 Score=31.22 Aligned_cols=36 Identities=17% Similarity=0.338 Sum_probs=30.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+||++...|+.|-+ =...+.++|.++|++|.++.++
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~ 37 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISR 37 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEECh
Confidence 58888888887754 5789999999999999999876
No 99
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=65.32 E-value=11 Score=34.47 Aligned_cols=39 Identities=13% Similarity=0.077 Sum_probs=32.3
Q ss_pred CCcEEEEEc-CCCccCHHHHHHHHHHHH--HCCCeEEEEeCC
Q 012735 5 KGRRLVLFP-LPLQGHISPMLQLANILH--SQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~-~~~~gH~~p~l~la~~L~--~~Gh~Vt~~~~~ 43 (457)
+.++|+|++ -|+-|-..-...+|..|+ ++|++|.++...
T Consensus 16 ~~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D 57 (348)
T 3io3_A 16 DSLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTD 57 (348)
T ss_dssp TTCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECC
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECC
Confidence 445565555 567799999999999999 899999999986
No 100
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=65.28 E-value=22 Score=34.23 Aligned_cols=105 Identities=10% Similarity=0.072 Sum_probs=66.5
Q ss_pred ccccChHh---hhcCCCCCCccc---ccCh-hHHHHHHhhCC-----cccccCccchhhHHHHHHHhhhccceecCCCCC
Q 012735 327 VKWAPQQE---VLAHPAVGAFWT---HNGW-NSTLESICEGI-----PMICMPCFTDQKVNARYVSDVWKVGLQLENGLK 394 (457)
Q Consensus 327 ~~~vpq~~---lL~~~~~~~~I~---hgG~-~s~~eal~~gv-----P~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~ 394 (457)
.+++|+.+ ++..+++ ||. .=|+ .++.||+++|+ |+|+--..+- +..+ .-|+.++. .+
T Consensus 337 ~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~----~~~l----~~g~lv~p-~d 405 (482)
T 1uqt_A 337 NQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA----ANEL----TSALIVNP-YD 405 (482)
T ss_dssp CSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG----GGTC----TTSEEECT-TC
T ss_pred CCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCC----HHHh----CCeEEECC-CC
Confidence 47788654 7778888 664 3355 48999999998 6665443221 1111 13455555 58
Q ss_pred HHHHHHHHHHHhcccchHH-HHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 012735 395 REEIEKTIRRVMVEKQGEE-IRSRIFRLKEKANHSWKQGRSSFESINSLVTHILSL 449 (457)
Q Consensus 395 ~~~l~~ai~~il~~~~~~~-~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (457)
+++++++|.++|++. +. -+++.++..+..+ + .+.+..++.+++.+++.
T Consensus 406 ~~~lA~ai~~lL~~~--~~~r~~~~~~~~~~v~----~-~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 406 RDEVAAALDRALTMS--LAERISRHAEMLDVIV----K-NDINHWQECFISDLKQI 454 (482)
T ss_dssp HHHHHHHHHHHHTCC--HHHHHHHHHHHHHHHH----H-TCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHcCC--HHHHHHHHHHHHHHHH----h-CCHHHHHHHHHHHHHhc
Confidence 999999999999852 22 2233333333333 3 46888888888888775
No 101
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=64.19 E-value=40 Score=28.53 Aligned_cols=37 Identities=5% Similarity=0.125 Sum_probs=30.6
Q ss_pred cEEEEEc-CCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFP-LPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~-~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
..+.+++ .++.|=..-++.++.++..+|..|.++.+.
T Consensus 12 G~i~litG~mGsGKTT~ll~~~~r~~~~g~kVli~~~~ 49 (223)
T 2b8t_A 12 GWIEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPK 49 (223)
T ss_dssp CEEEEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred cEEEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEEec
Confidence 3455555 448899999999999999999999998765
No 102
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=63.86 E-value=8.9 Score=32.39 Aligned_cols=40 Identities=15% Similarity=0.120 Sum_probs=35.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 4 RKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.++.||++.+.++-.|-....-++..|..+|++|..+...
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~ 129 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVD 129 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSS
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCC
Confidence 3468999999999999999999999999999999998764
No 103
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=63.36 E-value=88 Score=29.29 Aligned_cols=138 Identities=15% Similarity=0.106 Sum_probs=78.1
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCC-
Q 012735 261 PKSVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHP- 339 (457)
Q Consensus 261 ~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~- 339 (457)
..+.|-|-+||.+ +....++....++..|...-+.+.+. +++|+.+.+.. -+..- ...
T Consensus 264 ~~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~sa--------HR~p~~~~~~~----------~~~~~-~g~~ 322 (425)
T 2h31_A 264 SQCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTSA--------HKGPDETLRIK----------AEYEG-DGIP 322 (425)
T ss_dssp CCCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTCHHHHHHHH----------HHHHT-TCCC
T ss_pred CCCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeeec--------cCCHHHHHHHH----------HHHHH-CCCC
Confidence 3466778888888 56788888999999998877777653 45777653211 10000 012
Q ss_pred CCCCcccccCh----hHHHHHHhhCCcccccCccchhhHHHHHHHhhhc--cceecCC---CCCHHHHHHHHHHHhcccc
Q 012735 340 AVGAFWTHNGW----NSTLESICEGIPMICMPCFTDQKVNARYVSDVWK--VGLQLEN---GLKREEIEKTIRRVMVEKQ 410 (457)
Q Consensus 340 ~~~~~I~hgG~----~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG--~g~~l~~---~~~~~~l~~ai~~il~~~~ 410 (457)
+| +|.-+|. .++..++ .-+|+|.+|....-......+.- +. -|+-+.. ..++.-++..|- -+.|
T Consensus 323 ~v--iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~-vqmp~g~pvatv~~~~nAa~~A~~Il-~~~~-- 395 (425)
T 2h31_A 323 TV--FVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSS-LRLPSGLGCSTVLSPEGSAQFAAQIF-GLSN-- 395 (425)
T ss_dssp EE--EEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGT-SSCCSSCCCEECCCHHHHHHHHHHHH-HTTC--
T ss_pred eE--EEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHH-hcCCCCCceEEecCchHHHHHHHHHH-ccCC--
Confidence 34 6666654 4566555 48999999985322222222222 22 2222222 223333443332 3456
Q ss_pred hHHHHHHHHHHHHHHHH
Q 012735 411 GEEIRSRIFRLKEKANH 427 (457)
Q Consensus 411 ~~~~~~~a~~l~~~~~~ 427 (457)
+.++++.+..+.....
T Consensus 396 -~~l~~kl~~~~~~~~~ 411 (425)
T 2h31_A 396 -HLVWSKLRASILNTWI 411 (425)
T ss_dssp -HHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHH
Confidence 7888888888777653
No 104
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=62.93 E-value=5.8 Score=32.94 Aligned_cols=37 Identities=11% Similarity=0.034 Sum_probs=31.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++||++...|+.|=.. ...+.+.|.++|++|.++.++
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~ 44 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTK 44 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEch
Confidence 4688888888866664 789999999999999999886
No 105
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=61.21 E-value=6.5 Score=30.94 Aligned_cols=33 Identities=12% Similarity=0.231 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+.||+++.. |++- ..+++.|.++||+|+++...
T Consensus 3 ~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 457888854 4333 78899999999999999873
No 106
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=60.86 E-value=15 Score=34.87 Aligned_cols=38 Identities=13% Similarity=0.377 Sum_probs=33.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+..|+++..++.|-..-...||..|+++|+.|.++...
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D 137 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSD 137 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 45677777888899999999999999999999999875
No 107
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=60.54 E-value=4.2 Score=37.78 Aligned_cols=36 Identities=17% Similarity=0.137 Sum_probs=30.1
Q ss_pred cEEEEEc-CCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFP-LPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~-~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
++|++++ -++-|-..-...+|..|+++|+.|.++..
T Consensus 2 ~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 2 ALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 4666655 45559999999999999999999999987
No 108
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=60.39 E-value=64 Score=25.83 Aligned_cols=139 Identities=12% Similarity=0.118 Sum_probs=77.9
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCC
Q 012735 261 PKSVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPA 340 (457)
Q Consensus 261 ~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~ 340 (457)
+.|.|-|-+||.. +....++....++..+...-+.+... ++.|+.+.+.. -. .....
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~sa--------HR~p~~l~~~~----------~~---a~~~g 67 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSA--------HRMPDEMFDYA----------EK---ARERG 67 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTSHHHHHHHH----------HH---HTTTT
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcc--------ccCHHHHHHHH----------HH---HHhcC
Confidence 4466888889988 56788888999999988877777653 45777653211 10 11122
Q ss_pred CCCcccccCh----hHHHHHHhhCCcccccCccchhhHHHHH---HHh-hhccceecCCCCC------HHHHHHHHHHHh
Q 012735 341 VGAFWTHNGW----NSTLESICEGIPMICMPCFTDQKVNARY---VSD-VWKVGLQLENGLK------REEIEKTIRRVM 406 (457)
Q Consensus 341 ~~~~I~hgG~----~s~~eal~~gvP~v~~P~~~DQ~~na~~---v~~-~lG~g~~l~~~~~------~~~l~~ai~~il 406 (457)
++.+|.-.|. .++..++ .-+|+|.+|.......-..- +.. --|+.+..- -.+ ..-++..| --+
T Consensus 68 ~~ViIa~AG~aahLpgvvA~~-t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv-~i~~~~a~NAallA~~I-La~ 144 (173)
T 4grd_A 68 LRAIIAGAGGAAHLPGMLAAK-TTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATF-AIGEAGAANAALFAVSI-LSG 144 (173)
T ss_dssp CSEEEEEEESSCCHHHHHHHH-CCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEEC-CSSHHHHHHHHHHHHHH-HTT
T ss_pred CeEEEEeccccccchhhheec-CCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEE-ecCCcchHHHHHHHHHH-HcC
Confidence 2336665553 3555554 48999999975443221111 111 013332221 122 22222222 124
Q ss_pred cccchHHHHHHHHHHHHHHHHH
Q 012735 407 VEKQGEEIRSRIFRLKEKANHS 428 (457)
Q Consensus 407 ~~~~~~~~~~~a~~l~~~~~~~ 428 (457)
.| +.++++.++.+++.++.
T Consensus 145 ~d---~~l~~kl~~~r~~~~~~ 163 (173)
T 4grd_A 145 NS---VDYANRLAAFRVRQNEA 163 (173)
T ss_dssp SC---HHHHHHHHHHHHHHHHH
T ss_pred CC---HHHHHHHHHHHHHHHHH
Confidence 56 78999999888887743
No 109
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=60.23 E-value=43 Score=28.46 Aligned_cols=106 Identities=5% Similarity=0.012 Sum_probs=57.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCC-CCCCC--CCCCCCeeEEecCC-CCCCCCCCccCHHHH
Q 012735 4 RKGRRLVLFPLPLQGHISPMLQLANILHSQ--GFTITIIHTS-FNSPN--PSSHPHLTFHFIQE-NLSASEASTDDLVAF 77 (457)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~~-~~~~~--~~~~~g~~~~~i~~-~~~~~~~~~~~~~~~ 77 (457)
.+++||+|+.+++. + -+.++.++|.+. +++|..+.+. ..... .....|+.+..++. .+. +
T Consensus 20 ~~~~rI~~l~SG~g-~--~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~~~-------~---- 85 (229)
T 3auf_A 20 GHMIRIGVLISGSG-T--NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPAAYP-------S---- 85 (229)
T ss_dssp TTCEEEEEEESSCC-H--HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGGSS-------S----
T ss_pred CCCcEEEEEEeCCc-H--HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECccccc-------c----
Confidence 34579999977763 2 367778888876 6888766653 11110 01124666655442 110 0
Q ss_pred HHHHHHhcchhHHHHHHHHhhccCCCCeeEEEeCCCc-chHHHHHhHcCCCeEEEecc
Q 012735 78 VSLLNTKCLVPFRDCLAKLLADVEEEPIACLISDAML-PFTQAVADSLKLPRIVLRTG 134 (457)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~-~~~~~~A~~l~iP~v~~~~~ 134 (457)
...+.+.+.+.++.. +||+||+-.+. .-...+-+...-.++-+.++
T Consensus 86 --------r~~~~~~~~~~l~~~---~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 86 --------RTAFDAALAERLQAY---GVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp --------HHHHHHHHHHHHHHT---TCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred --------hhhccHHHHHHHHhc---CCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 011222222222222 89999987653 33444445566677877665
No 110
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=59.79 E-value=7 Score=32.77 Aligned_cols=39 Identities=10% Similarity=0.127 Sum_probs=30.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHH-CCCeEEEEeCCC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHS-QGFTITIIHTSF 44 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~-~Gh~Vt~~~~~~ 44 (457)
+++||++...|+.+=+ -...+.+.|.+ +|++|.++.++.
T Consensus 18 ~~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~ 57 (206)
T 1qzu_A 18 RKFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTER 57 (206)
T ss_dssp SSEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTG
T ss_pred CCCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHh
Confidence 4578888888887654 45899999999 899999999974
No 111
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=59.31 E-value=7.5 Score=31.84 Aligned_cols=37 Identities=11% Similarity=0.064 Sum_probs=30.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSF 44 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 44 (457)
+||++.-.|+.|=+ -...+.+.|+++|++|.++.++.
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~ 39 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPS 39 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchh
Confidence 46777777776555 67899999999999999999873
No 112
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=59.01 E-value=64 Score=25.41 Aligned_cols=131 Identities=18% Similarity=0.194 Sum_probs=74.4
Q ss_pred EEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCCCCCc
Q 012735 265 IYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVGAF 344 (457)
Q Consensus 265 v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~ 344 (457)
|-|-+||.. +....++....++..+...-+.+.+. +++|+.+.+... .. +.++ +
T Consensus 2 V~Iimgs~S--D~~v~~~a~~~l~~~gi~~dv~V~sa--------HR~p~~~~~~~~------~a--------~~~V--i 55 (157)
T 2ywx_A 2 ICIIMGSES--DLKIAEKAVNILKEFGVEFEVRVASA--------HRTPELVEEIVK------NS--------KADV--F 55 (157)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTCHHHHHHHHH------HC--------CCSE--E
T ss_pred EEEEEccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc--------cCCHHHHHHHHH------hc--------CCCE--E
Confidence 455677777 56788888889998888876666553 457777632111 00 1144 7
Q ss_pred ccccCh----hHHHHHHhhCCcccccCccchhhHHHHHHHhhh----ccceec---CCCCCHHHHHHHHHHHhcccchHH
Q 012735 345 WTHNGW----NSTLESICEGIPMICMPCFTDQKVNARYVSDVW----KVGLQL---ENGLKREEIEKTIRRVMVEKQGEE 413 (457)
Q Consensus 345 I~hgG~----~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~l----G~g~~l---~~~~~~~~l~~ai~~il~~~~~~~ 413 (457)
|.-.|. .++..++ .-+|+|.+|....-......+.- + |+.+.. +...++.-++..|- -+.| +.
T Consensus 56 Ia~AG~aa~Lpgvva~~-t~~PVIgVP~~~~l~G~daLlS~-vqmP~gvpVatV~I~~~~nAa~lA~~Il-~~~d---~~ 129 (157)
T 2ywx_A 56 IAIAGLAAHLPGVVASL-TTKPVIAVPVDAKLDGLDALLSS-VQMPPGIPVATVGIDRGENAAILALEIL-ALKD---EN 129 (157)
T ss_dssp EEEEESSCCHHHHHHTT-CSSCEEEEEECSSGGGHHHHHHH-HSCCTTSCCEECCTTCHHHHHHHHHHHH-TTTC---HH
T ss_pred EEEcCchhhhHHHHHhc-cCCCEEEecCCCccCcHHHHHHH-hcCCCCCeeEEEecCCcHHHHHHHHHHH-hcCC---HH
Confidence 766553 3455444 47899999983221222222222 2 432211 11234444443332 2456 78
Q ss_pred HHHHHHHHHHHHHH
Q 012735 414 IRSRIFRLKEKANH 427 (457)
Q Consensus 414 ~~~~a~~l~~~~~~ 427 (457)
++++.+..+++.++
T Consensus 130 l~~kl~~~r~~~~~ 143 (157)
T 2ywx_A 130 IAKKLIEYREKMKK 143 (157)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999988888873
No 113
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=58.25 E-value=15 Score=28.73 Aligned_cols=38 Identities=13% Similarity=0.207 Sum_probs=29.9
Q ss_pred CcEEE-EEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLV-LFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il-~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+++++ ++..+..-.+.+.+.+|...++.|++|+++.+.
T Consensus 7 ~~kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~ 45 (144)
T 2qs7_A 7 KKKLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTF 45 (144)
T ss_dssp CCEEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred cCCEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEeh
Confidence 44554 444556688889999999999999999998874
No 114
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=58.23 E-value=68 Score=25.45 Aligned_cols=137 Identities=10% Similarity=0.108 Sum_probs=76.7
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCCCC
Q 012735 263 SVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVG 342 (457)
Q Consensus 263 ~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~ 342 (457)
+.|-|-+||.. +....++....++..+...-+.+... +++|+.+.+... . .....++
T Consensus 4 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa--------HR~p~~~~~~~~------~-------a~~~g~~ 60 (163)
T 3ors_A 4 MKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSA--------HRTPKMMVQFAS------E-------ARERGIN 60 (163)
T ss_dssp CCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTSHHHHHHHHH------H-------TTTTTCC
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECC--------cCCHHHHHHHHH------H-------HHhCCCc
Confidence 44777788887 56788888889998888877776553 457777632110 0 0111223
Q ss_pred CcccccCh----hHHHHHHhhCCcccccCccchhh-HHHHHH--Hhh-hcc--cee-cCC--CCCHHHHHHHHHHHhccc
Q 012735 343 AFWTHNGW----NSTLESICEGIPMICMPCFTDQK-VNARYV--SDV-WKV--GLQ-LEN--GLKREEIEKTIRRVMVEK 409 (457)
Q Consensus 343 ~~I~hgG~----~s~~eal~~gvP~v~~P~~~DQ~-~na~~v--~~~-lG~--g~~-l~~--~~~~~~l~~ai~~il~~~ 409 (457)
.+|.-.|. .++..++ .-+|+|.+|...... .....+ ... -|+ +.. +++ ..++..++..|- -+.|
T Consensus 61 ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il-~~~d- 137 (163)
T 3ors_A 61 IIIAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGAAGAKNAGILAARML-SIQN- 137 (163)
T ss_dssp EEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHH-HTTC-
T ss_pred EEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEEEcCCcccHHHHHHHHHHH-hCCC-
Confidence 37776664 4555554 579999999864322 111111 110 133 211 221 123333333332 2355
Q ss_pred chHHHHHHHHHHHHHHHH
Q 012735 410 QGEEIRSRIFRLKEKANH 427 (457)
Q Consensus 410 ~~~~~~~~a~~l~~~~~~ 427 (457)
+.++++.+..++++++
T Consensus 138 --~~l~~kl~~~r~~~~~ 153 (163)
T 3ors_A 138 --PSLVEKLNQYESSLIQ 153 (163)
T ss_dssp --THHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHH
Confidence 6889999988888873
No 115
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=57.53 E-value=9.6 Score=32.62 Aligned_cols=36 Identities=25% Similarity=0.329 Sum_probs=29.2
Q ss_pred CCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 1 MDQRKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 1 ~~~~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|.| .++||.|+..|..|- .||+.|+++||+|+.+..
T Consensus 2 ~~~-~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 2 MQA-PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp -CC-CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSS
T ss_pred CCC-CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecC
Confidence 444 678999999998875 589999999999987665
No 116
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=56.66 E-value=74 Score=25.39 Aligned_cols=136 Identities=14% Similarity=0.163 Sum_probs=77.0
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCCCC
Q 012735 263 SVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVG 342 (457)
Q Consensus 263 ~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~ 342 (457)
+.|-|-+||.. +....++....++..+...-+.+... +++|+.+.+. +-... -...++
T Consensus 7 ~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa--------HR~p~~~~~~----------~~~a~-~~g~~V- 64 (169)
T 3trh_A 7 IFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSA--------HRTPKETVEF----------VENAD-NRGCAV- 64 (169)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTSHHHHHHH----------HHHHH-HTTEEE-
T ss_pred CcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcc--------cCCHHHHHHH----------HHHHH-hCCCcE-
Confidence 45777788887 56788888899999888877777653 4477766321 11000 012334
Q ss_pred CcccccCh----hHHHHHHhhCCcccccCccchhh-HHHHHHHhhhc--cceecCC-CC------CHHHHHHHHHHHhcc
Q 012735 343 AFWTHNGW----NSTLESICEGIPMICMPCFTDQK-VNARYVSDVWK--VGLQLEN-GL------KREEIEKTIRRVMVE 408 (457)
Q Consensus 343 ~~I~hgG~----~s~~eal~~gvP~v~~P~~~DQ~-~na~~v~~~lG--~g~~l~~-~~------~~~~l~~ai~~il~~ 408 (457)
+|.-.|. .++..++. -+|+|.+|...-.. .....+.- +. -|+-+.. .+ ++..++..| --+.|
T Consensus 65 -iIa~AG~aa~LpgvvA~~t-~~PVIgVP~~~~~l~G~dsLlS~-vqmp~GvPVatV~I~~a~~~nAa~lAa~I-l~~~d 140 (169)
T 3trh_A 65 -FIAAAGLAAHLAGTIAAHT-LKPVIGVPMAGGSLGGLDALLST-VQMPGGVPVACTAIGKAGAKNAAILAAQI-IALQD 140 (169)
T ss_dssp -EEEEECSSCCHHHHHHHTC-SSCEEEEECCCSTTTTHHHHHHH-HCCCTTSCCEECCSTHHHHHHHHHHHHHH-HHTTC
T ss_pred -EEEECChhhhhHHHHHhcC-CCCEEEeecCCCCCCCHHHHHHh-hcCCCCCceEEEecCCccchHHHHHHHHH-HcCCC
Confidence 7776664 34554444 68999999863222 22222222 12 2321111 22 233333222 23456
Q ss_pred cchHHHHHHHHHHHHHHHH
Q 012735 409 KQGEEIRSRIFRLKEKANH 427 (457)
Q Consensus 409 ~~~~~~~~~a~~l~~~~~~ 427 (457)
+.++++.+..+++.++
T Consensus 141 ---~~l~~kl~~~r~~~~~ 156 (169)
T 3trh_A 141 ---KSIAQKLVQQRTAKRE 156 (169)
T ss_dssp ---HHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHH
Confidence 7899999999888873
No 117
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=56.65 E-value=6.4 Score=34.70 Aligned_cols=52 Identities=13% Similarity=0.187 Sum_probs=38.1
Q ss_pred CCCCCcccccChhHHHHHHhh------CCcccccCccchhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHhcc
Q 012735 339 PAVGAFWTHNGWNSTLESICE------GIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVMVE 408 (457)
Q Consensus 339 ~~~~~~I~hgG~~s~~eal~~------gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~~ 408 (457)
+++ +|.-||=||+++++.. ++|++.+|.. . +|. +. .+.++++.++++++++.
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G-----------~-lgf---l~-~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHTG-----------H-LGF---YA-DWRPAEADKLVKLLAKG 93 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEESS-----------S-CCS---SC-CBCGGGHHHHHHHHHTT
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC-----------C-CCc---CC-cCCHHHHHHHHHHHHcC
Confidence 566 9999999999999875 8899888751 1 232 11 34577788888888765
No 118
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=56.34 E-value=17 Score=30.17 Aligned_cols=28 Identities=11% Similarity=0.133 Sum_probs=23.8
Q ss_pred CCCCCcccccChhHHHHHHhhCCcccccCcc
Q 012735 339 PAVGAFWTHNGWNSTLESICEGIPMICMPCF 369 (457)
Q Consensus 339 ~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~ 369 (457)
+++ +|+.||........ .++|+|-++..
T Consensus 52 ~dV--IISRGgta~~lr~~-~~iPVV~I~~s 79 (196)
T 2q5c_A 52 VDA--IISRGATSDYIKKS-VSIPSISIKVT 79 (196)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCC
T ss_pred CeE--EEECChHHHHHHHh-CCCCEEEEcCC
Confidence 455 99999999998875 57999999985
No 119
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=55.92 E-value=7.8 Score=29.57 Aligned_cols=33 Identities=24% Similarity=0.467 Sum_probs=24.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.++|+++.. |.+ ...+++.|.++||+|+++..
T Consensus 3 ~~m~i~IiG~---G~i--G~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 3 HGMYIIIAGI---GRV--GYTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp --CEEEEECC---SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECC---CHH--HHHHHHHHHhCCCeEEEEEC
Confidence 3578888844 444 34688999999999999876
No 120
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=55.88 E-value=78 Score=25.40 Aligned_cols=137 Identities=14% Similarity=0.102 Sum_probs=78.0
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCCCC
Q 012735 263 SVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVG 342 (457)
Q Consensus 263 ~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~ 342 (457)
+.|-|-+||.. +....++....++..+...-+.+... +++|+.+.+.. -... -...++
T Consensus 8 ~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~Sa--------HR~p~~~~~~~----------~~a~-~~g~~V- 65 (174)
T 3lp6_A 8 PRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSA--------HRTPEAMFSYA----------RGAA-ARGLEV- 65 (174)
T ss_dssp CSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTCHHHHHHHH----------HHHH-HHTCCE-
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECC--------CCCHHHHHHHH----------HHHH-hCCCCE-
Confidence 44777788887 56788888899999888877777653 45777663211 1000 022344
Q ss_pred CcccccCh----hHHHHHHhhCCcccccCccchhh-HHHHH---HHhhhcccee--c-CCCCCHHHHHHHHHHHhcccch
Q 012735 343 AFWTHNGW----NSTLESICEGIPMICMPCFTDQK-VNARY---VSDVWKVGLQ--L-ENGLKREEIEKTIRRVMVEKQG 411 (457)
Q Consensus 343 ~~I~hgG~----~s~~eal~~gvP~v~~P~~~DQ~-~na~~---v~~~lG~g~~--l-~~~~~~~~l~~ai~~il~~~~~ 411 (457)
+|.-.|. .++..++ .-+|+|.+|...-.. ..... ++---|+.+. . +...++..++..| --+.|
T Consensus 66 -iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I~~~~nAa~lAa~I-l~~~d--- 139 (174)
T 3lp6_A 66 -IIAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRM-LGAAN--- 139 (174)
T ss_dssp -EEEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCTTCHHHHHHHHHHH-HHTTC---
T ss_pred -EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEcCcchHHHHHHHHH-HhCCC---
Confidence 7776664 3555554 579999999863221 11111 2211142222 1 1123444444333 22456
Q ss_pred HHHHHHHHHHHHHHHH
Q 012735 412 EEIRSRIFRLKEKANH 427 (457)
Q Consensus 412 ~~~~~~a~~l~~~~~~ 427 (457)
+.++++.+..+++.++
T Consensus 140 ~~l~~kl~~~r~~~~~ 155 (174)
T 3lp6_A 140 PQLRARIVAFQDRLAD 155 (174)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7899999999888763
No 121
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=55.85 E-value=78 Score=25.39 Aligned_cols=140 Identities=15% Similarity=0.165 Sum_probs=79.2
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCCCC
Q 012735 263 SVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVG 342 (457)
Q Consensus 263 ~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~ 342 (457)
+.|-|-+||.. +....++....++..+...-+.+... +++|+.+.+... . .....++
T Consensus 13 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~Sa--------HR~p~~~~~~~~----------~---a~~~g~~ 69 (174)
T 3kuu_A 13 VKIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVSA--------HRTPDRLFSFAE----------Q---AEANGLH 69 (174)
T ss_dssp CCEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTCHHHHHHHHH----------H---TTTTTCS
T ss_pred CcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc--------cCCHHHHHHHHH----------H---HHhCCCc
Confidence 34677788887 56788888899999888877777653 457777632110 0 0111223
Q ss_pred CcccccCh----hHHHHHHhhCCcccccCccchhh-HHHHHHHhhhc--cceecCC-CCC------HHHHHHHHHHHhcc
Q 012735 343 AFWTHNGW----NSTLESICEGIPMICMPCFTDQK-VNARYVSDVWK--VGLQLEN-GLK------REEIEKTIRRVMVE 408 (457)
Q Consensus 343 ~~I~hgG~----~s~~eal~~gvP~v~~P~~~DQ~-~na~~v~~~lG--~g~~l~~-~~~------~~~l~~ai~~il~~ 408 (457)
.+|.-.|. .++..++. -+|+|.+|...... .....+.- +. -|+-+.. .+. ...++..| --+.|
T Consensus 70 ViIa~AG~aa~LpgvvA~~t-~~PVIgVP~~~~~l~G~dsLlS~-vqmP~GvPVatV~I~~a~~~nAa~lAa~I-La~~d 146 (174)
T 3kuu_A 70 VIIAGNGGAAHLPGMLAAKT-LVPVLGVPVQSAALSGVDSLYSI-VQMPRGIPVGTLAIGKAGAANAALLAAQI-LALHD 146 (174)
T ss_dssp EEEEEEESSCCHHHHHHHTC-SSCEEEEEECCTTTTTHHHHHHH-HTCCTTSCCEECCSSHHHHHHHHHHHHHH-HHTTC
T ss_pred EEEEECChhhhhHHHHHhcc-CCCEEEeeCCCCCCCCHHHHHHh-hhCCCCCeeEEEEeCCccchHHHHHHHHH-HcCCC
Confidence 37776664 35554444 68999999854221 22222222 12 2321211 222 33333333 23456
Q ss_pred cchHHHHHHHHHHHHHHHHHHhc
Q 012735 409 KQGEEIRSRIFRLKEKANHSWKQ 431 (457)
Q Consensus 409 ~~~~~~~~~a~~l~~~~~~~~~~ 431 (457)
+.++++.++.++++++.+.+
T Consensus 147 ---~~l~~kl~~~r~~~~~~v~~ 166 (174)
T 3kuu_A 147 ---TELAGRLAHWRQSQTDDVLD 166 (174)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHHHHHHHHHHh
Confidence 78999999999988755443
No 122
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=55.20 E-value=12 Score=31.90 Aligned_cols=40 Identities=13% Similarity=0.027 Sum_probs=25.6
Q ss_pred CCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 1 MDQRKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 1 ~~~~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
|+...+.|.++++.++. .--.++++.|+++|++|.++...
T Consensus 1 M~~~~~~k~vlVTGas~---gIG~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 1 MAASGEARRVLVYGGRG---ALGSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp -----CCCEEEEETTTS---HHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCccCCCCEEEEECCCc---HHHHHHHHHHHhCCCEEEEEeCC
Confidence 45444555566665543 24678999999999999988753
No 123
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=55.11 E-value=12 Score=33.84 Aligned_cols=35 Identities=17% Similarity=0.154 Sum_probs=29.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
..+||.|+..++.| |-++|+.|.++||+|+..-..
T Consensus 3 ~~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 3 AMKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp CCCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcCC
Confidence 46799999999876 668999999999999987653
No 124
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=54.84 E-value=13 Score=25.14 Aligned_cols=49 Identities=16% Similarity=0.306 Sum_probs=35.3
Q ss_pred hCCcccccCccchhhHHHHHHHhhhccceecCC--CCCHHHHHHHHHHHhc
Q 012735 359 EGIPMICMPCFTDQKVNARYVSDVWKVGLQLEN--GLKREEIEKTIRRVMV 407 (457)
Q Consensus 359 ~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~--~~~~~~l~~ai~~il~ 407 (457)
+|+|++++--.+.|.+....-.++..-|+..+. ..++++|...+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqneakkegvsydvlkstdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLKSTDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhcCcchhhhccCCHHHHHHHHHHHHH
Confidence 799999988888887765443222355665554 6799999999988874
No 125
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=54.40 E-value=39 Score=28.37 Aligned_cols=103 Identities=8% Similarity=0.112 Sum_probs=53.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCC--eEEEEeCCC-CCCCC--CCCCCeeEEecCCC-CCCCCCCccCHHHHHHH
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGF--TITIIHTSF-NSPNP--SSHPHLTFHFIQEN-LSASEASTDDLVAFVSL 80 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh--~Vt~~~~~~-~~~~~--~~~~g~~~~~i~~~-~~~~~~~~~~~~~~~~~ 80 (457)
+||+|+.+++.+ -+.++.++|.+.+| +|..+.+.. ..... ....|+.+..++.. +. +
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~~~~~~-------~------- 64 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKHNVECKVIQRKEFP-------S------- 64 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHHTCCEEECCGGGSS-------S-------
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeCccccc-------c-------
Confidence 588888776642 46778888888888 776555431 11100 11135555444321 10 0
Q ss_pred HHHhcchhHHHHHHHHhhccCCCCeeEEEeCCCc-chHHHHHhHcCCCeEEEecc
Q 012735 81 LNTKCLVPFRDCLAKLLADVEEEPIACLISDAML-PFTQAVADSLKLPRIVLRTG 134 (457)
Q Consensus 81 ~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~-~~~~~~A~~l~iP~v~~~~~ 134 (457)
...+.+.+.+.+++. +||++|+-.+. .-...+-+...-.++-++++
T Consensus 65 -----r~~~~~~~~~~l~~~---~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 65 -----KKEFEERMALELKKK---GVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp -----HHHHHHHHHHHHHHT---TCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred -----hhhhhHHHHHHHHhc---CCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 111222222222222 89999987653 33344445555667777665
No 126
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=53.06 E-value=1.1e+02 Score=29.78 Aligned_cols=33 Identities=21% Similarity=0.293 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.+|++++. .-.-.+++++.|.+.|-+|..+...
T Consensus 364 GKrvaI~g-----d~~~~~~la~fL~elGm~vv~v~~~ 396 (523)
T 3u7q_B 364 GKRFALWG-----DPDFVMGLVKFLLELGCEPVHILCH 396 (523)
T ss_dssp TCEEEEEC-----SHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHcCCEEEEEEeC
Confidence 46777762 3345678889999999999988774
No 127
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=52.93 E-value=21 Score=29.83 Aligned_cols=44 Identities=11% Similarity=-0.053 Sum_probs=31.2
Q ss_pred ccccCCCCCCcEEEEEecccccCCHHHHHHHHHHHhhCCCCeEE
Q 012735 253 IAWLDKQAPKSVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLW 296 (457)
Q Consensus 253 ~~~l~~~~~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~ 296 (457)
.+|+.....+.++||..++......+......++++++|..+.+
T Consensus 19 ~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~ 62 (206)
T 3l4e_A 19 TEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEE 62 (206)
T ss_dssp HHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEE
Confidence 34543333467999998877554567788899999999987543
No 128
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=51.93 E-value=19 Score=29.30 Aligned_cols=76 Identities=7% Similarity=0.098 Sum_probs=41.2
Q ss_pred cccccCh-Hhhh-cCCCCCCcccccChhHHHHH---HhhCCcccccCccchhhHHHHHHHhhhccceecCCCCCHHHHHH
Q 012735 326 LVKWAPQ-QEVL-AHPAVGAFWTHNGWNSTLES---ICEGIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEK 400 (457)
Q Consensus 326 ~~~~vpq-~~lL-~~~~~~~~I~hgG~~s~~ea---l~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ 400 (457)
+++..++ ..++ ..++ ..++--||.||+-|+ +.+++|++++|.+. .....+... -..... ..-+++++.+
T Consensus 93 ~~~~~~~Rk~~m~~~sd-a~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~-~~~~~~e~~~ 166 (176)
T 2iz6_A 93 VTGLGSARDNINALSSN-VLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVH-VAADVAGAIA 166 (176)
T ss_dssp ECCCCSSSCCCCGGGCS-EEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEE-EESSHHHHHH
T ss_pred EcCCHHHHHHHHHHhCC-EEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEE-EcCCHHHHHH
Confidence 3455553 3333 2333 335567889986665 67999999999842 111122221 111111 1247788777
Q ss_pred HHHHHhc
Q 012735 401 TIRRVMV 407 (457)
Q Consensus 401 ai~~il~ 407 (457)
.+.+.+.
T Consensus 167 ~l~~~~~ 173 (176)
T 2iz6_A 167 AVKQLLA 173 (176)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766553
No 129
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=51.39 E-value=29 Score=29.89 Aligned_cols=38 Identities=21% Similarity=0.276 Sum_probs=28.5
Q ss_pred CcEEEEEcCCCcc-----------CHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQG-----------HISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~g-----------H~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++||+++.....+ ...=++.--..|.++|++|+++++.
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4678887766321 2455777788999999999999985
No 130
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=51.18 E-value=45 Score=25.54 Aligned_cols=48 Identities=15% Similarity=0.079 Sum_probs=33.0
Q ss_pred hCCcccccCccchhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHhcc
Q 012735 359 EGIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVMVE 408 (457)
Q Consensus 359 ~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~~ 408 (457)
..+|+|++--..+ ........+ .|+--.+.+.++.+.|..+|+.++..
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~-~g~~~~l~kP~~~~~L~~~i~~~~~~ 121 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQ-DGAYDFIAKPFAADRLVQSARRAEEK 121 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHH-TTCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHh-cCCCeEEeCCCCHHHHHHHHHHHHHH
Confidence 4678877755444 334444445 37655565578999999999999976
No 131
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=50.94 E-value=15 Score=28.82 Aligned_cols=33 Identities=21% Similarity=0.437 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.++|+++..|..| ..+++.|.++|++|+++...
T Consensus 19 ~~~v~IiG~G~iG-----~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 19 SKYIVIFGCGRLG-----SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEECCCHHH-----HHHHHHHHhCCCeEEEEECC
Confidence 5788888654333 56899999999999998764
No 132
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=50.85 E-value=22 Score=29.44 Aligned_cols=33 Identities=12% Similarity=0.209 Sum_probs=24.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
|||+++... |. --..|+++|+++||+|+.++..
T Consensus 1 MkvlVtGat--G~--iG~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGAT--GR--AGSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEETTT--SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEcCC--ch--hHHHHHHHHHhCCCEEEEEEcC
Confidence 466665433 32 3468899999999999998864
No 133
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=50.06 E-value=11 Score=29.12 Aligned_cols=33 Identities=21% Similarity=0.229 Sum_probs=26.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+.||+++.++..| ..+|+.|.++||+|+++...
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 5688888775444 57899999999999999874
No 134
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=49.75 E-value=24 Score=29.75 Aligned_cols=34 Identities=15% Similarity=0.129 Sum_probs=25.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.++|+++...+ .--..++++|+++||+|+.++..
T Consensus 21 ~~~ilVtGatG----~iG~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 21 GMRVLVVGANG----KVARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp CCEEEEETTTS----HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEECCCC----hHHHHHHHHHHhCCCeEEEEECC
Confidence 46676664433 34468899999999999998864
No 135
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=49.53 E-value=10 Score=36.90 Aligned_cols=36 Identities=6% Similarity=0.253 Sum_probs=28.8
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 3 QRKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 3 ~~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+.+|.||+++..+..| +.+|+.|.+.|++||++...
T Consensus 39 ~~~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~ 74 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPR 74 (502)
T ss_dssp SCSSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESS
T ss_pred CCCCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCC
Confidence 3457899999876544 67899999999999999864
No 136
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=49.37 E-value=11 Score=32.08 Aligned_cols=67 Identities=10% Similarity=0.101 Sum_probs=44.5
Q ss_pred CCCCCcccccChhHHHHHHhhCCcccccCcc-----------------------chhhHHHHHHHhhhccceecCCCCCH
Q 012735 339 PAVGAFWTHNGWNSTLESICEGIPMICMPCF-----------------------TDQKVNARYVSDVWKVGLQLENGLKR 395 (457)
Q Consensus 339 ~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~-----------------------~DQ~~na~~v~~~lG~g~~l~~~~~~ 395 (457)
+++ +|+.||.......- .++|+|-++.. .+....+..+.+.+|+-+....-.+.
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i~~~~~~~~ 140 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPSGYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITE 140 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEEEESSH
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCCHHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCceEEEEeCCH
Confidence 555 99999999998875 58999999984 22333444455443443333223467
Q ss_pred HHHHHHHHHHhcc
Q 012735 396 EEIEKTIRRVMVE 408 (457)
Q Consensus 396 ~~l~~ai~~il~~ 408 (457)
+++...|.++..+
T Consensus 141 ee~~~~i~~l~~~ 153 (225)
T 2pju_A 141 EDARGQINELKAN 153 (225)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHC
Confidence 7888888877655
No 137
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=49.25 E-value=25 Score=31.45 Aligned_cols=41 Identities=5% Similarity=0.016 Sum_probs=30.8
Q ss_pred CCCCcEEEEEcCCCcc-C---HHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 3 QRKGRRLVLFPLPLQG-H---ISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 3 ~~~~~~il~~~~~~~g-H---~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+..++||+++..+-.+ | +.....++++|.++||+|..+...
T Consensus 10 ~~~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~ 54 (317)
T 4eg0_A 10 PKRFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPA 54 (317)
T ss_dssp GGGGCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred hhhcceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3446788888876443 2 346788999999999999998853
No 138
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=48.85 E-value=25 Score=29.27 Aligned_cols=33 Identities=6% Similarity=0.165 Sum_probs=24.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
|||+++... |. --..|+++|+++||+|+.++-.
T Consensus 1 MkilVtGat--G~--iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGAT--GR--AGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEETTT--SH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcCC--CH--HHHHHHHHHHHCCCEEEEEEec
Confidence 466665433 32 3468899999999999999864
No 139
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=48.69 E-value=56 Score=26.43 Aligned_cols=33 Identities=15% Similarity=0.368 Sum_probs=24.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++|+++... | .--..++++|.++||+|+.++..
T Consensus 4 ~~ilVtGat--G--~iG~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIFGAT--G--QTGLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEESTT--S--HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcCC--c--HHHHHHHHHHHHCCCeEEEEEeC
Confidence 577766433 3 34568899999999999998864
No 140
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=48.53 E-value=23 Score=31.82 Aligned_cols=37 Identities=14% Similarity=0.144 Sum_probs=25.3
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 3 QRKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 3 ~~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+++.++|++....+ .--..|+++|.++||+|+.++..
T Consensus 11 ~~~~~~vlVTGatG----~iG~~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 11 GSMTRSALVTGITG----QDGAYLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp ----CEEEEETTTS----HHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCeEEEECCCC----hHHHHHHHHHHHCCCeEEEEeCC
Confidence 34567887765443 33467899999999999998864
No 141
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=48.34 E-value=1.1e+02 Score=24.75 Aligned_cols=140 Identities=12% Similarity=0.153 Sum_probs=79.0
Q ss_pred CcEEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCCC
Q 012735 262 KSVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAV 341 (457)
Q Consensus 262 ~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~ 341 (457)
+|+|-|-+||.. +....++..+.|+..+...-+.+... .+.|+.+.+.. -. .....+
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SA--------HRtp~~l~~~~----------~~---a~~~g~ 78 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA--------HRTPDYMFEYA----------ET---ARERGL 78 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT--------TTSHHHHHHHH----------HH---TTTTTC
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcc--------ccChHHHHHHH----------HH---HHhcCc
Confidence 467888899998 56788889999999988877777654 34676653211 10 011223
Q ss_pred CCcccccCh----hHHHHHHhhCCcccccCccchhh---HHHHHHHhhhccceecCC-CCCHH-HHHHHH--HHH--hcc
Q 012735 342 GAFWTHNGW----NSTLESICEGIPMICMPCFTDQK---VNARYVSDVWKVGLQLEN-GLKRE-EIEKTI--RRV--MVE 408 (457)
Q Consensus 342 ~~~I~hgG~----~s~~eal~~gvP~v~~P~~~DQ~---~na~~v~~~lG~g~~l~~-~~~~~-~l~~ai--~~i--l~~ 408 (457)
+.+|.-.|. .++..+ ..-+|+|.+|...... +.---+.. +--|+-+-. ..... ..-+++ .++ +.|
T Consensus 79 ~ViIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSivQ-MP~GvpVaTvaig~~ga~NAallA~qILa~~d 156 (181)
T 4b4k_A 79 KVIIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVATVAIGKAGSTNAGLLAAQILGSFH 156 (181)
T ss_dssp CEEEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHHT-CCTTCCCEECCSSHHHHHHHHHHHHHHHTTTC
T ss_pred eEEEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHHh-CCCCCceEEEecCCccHHHHHHHHHHHHccCC
Confidence 336666553 344444 4578999999864332 22222222 233443332 22211 111111 133 346
Q ss_pred cchHHHHHHHHHHHHHHHHHH
Q 012735 409 KQGEEIRSRIFRLKEKANHSW 429 (457)
Q Consensus 409 ~~~~~~~~~a~~l~~~~~~~~ 429 (457)
++++++.+..+++.++.+
T Consensus 157 ---~~l~~kl~~~r~~~~~~v 174 (181)
T 4b4k_A 157 ---DDIHDALELRREAIEKDV 174 (181)
T ss_dssp ---HHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHH
Confidence 788888888888876433
No 142
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=48.21 E-value=35 Score=28.42 Aligned_cols=34 Identities=24% Similarity=0.289 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+++|+++... | .--..|++.|.++||+|+.++..
T Consensus 4 m~~ilItGat--G--~iG~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLIGAS--G--FVGSALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CCEEEEETCC--H--HHHHHHHHHHHTTTCEEEEECSC
T ss_pred CCEEEEEcCC--c--hHHHHHHHHHHHCCCEEEEEEcC
Confidence 5677776433 3 33468899999999999998874
No 143
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=48.17 E-value=93 Score=26.68 Aligned_cols=37 Identities=19% Similarity=0.255 Sum_probs=27.2
Q ss_pred hHHHHHHHHhhccCCCCeeEEEeCCCc---chHHHHHhHcCCCeEE
Q 012735 88 PFRDCLAKLLADVEEEPIACLISDAML---PFTQAVADSLKLPRIV 130 (457)
Q Consensus 88 ~~~~~l~~l~~~~~~~~pDlvi~D~~~---~~~~~~A~~l~iP~v~ 130 (457)
.++..++.+.+ -.+++.|..+ ..+..+|..+|+|++.
T Consensus 116 ~m~~vm~~l~~------~gL~fvDS~Ts~~S~a~~~A~~~gvp~~~ 155 (245)
T 2nly_A 116 IMRAILEVVKE------KNAFIIDSGTSPHSLIPQLAEELEVPYAT 155 (245)
T ss_dssp HHHHHHHHHHH------TTCEEEECCCCSSCSHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHH------CCCEEEcCCCCcccHHHHHHHHcCCCeEE
Confidence 33445555543 2699999885 5688899999999988
No 144
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=47.85 E-value=13 Score=31.73 Aligned_cols=37 Identities=16% Similarity=0.054 Sum_probs=32.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
|||+|..-|+-|=..-...||..|+++|++|.++-..
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D 37 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGD 37 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEEC
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 5788877777799999999999999999999998775
No 145
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=47.81 E-value=20 Score=30.46 Aligned_cols=37 Identities=8% Similarity=0.044 Sum_probs=28.8
Q ss_pred CCcEEEEEc-CC-CccCHHHHHHHHHHHHHCCCeEEEEe
Q 012735 5 KGRRLVLFP-LP-LQGHISPMLQLANILHSQGFTITIIH 41 (457)
Q Consensus 5 ~~~~il~~~-~~-~~gH~~p~l~la~~L~~~Gh~Vt~~~ 41 (457)
.+|+.+|++ .. +-|-..-...|++.|+++|++|.++=
T Consensus 2 ~~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 2 NAMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TTCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 455555544 43 44999999999999999999999965
No 146
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=47.66 E-value=19 Score=32.57 Aligned_cols=35 Identities=11% Similarity=0.007 Sum_probs=23.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++++|+++...+ .--..|+++|+++||+|+.+...
T Consensus 18 ~~~~vlVtGatG----~iG~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 18 GSHMILVTGSAG----RVGRAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp ---CEEEETTTS----HHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEECCCC----hHHHHHHHHHHhCCCEEEEEeCC
Confidence 456777665433 33457899999999999998764
No 147
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=47.44 E-value=36 Score=30.32 Aligned_cols=80 Identities=11% Similarity=0.033 Sum_probs=47.3
Q ss_pred EEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCCCCC
Q 012735 264 VIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVGA 343 (457)
Q Consensus 264 vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~ 343 (457)
.|+++--|-.....+.+..+...|+..+..+.+..... +.+..+ +. .++....++
T Consensus 12 ~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~-----------~~~a~~-------~~-----~~~~~~~d~-- 66 (304)
T 3s40_A 12 LLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKE-----------QGDATK-------YC-----QEFASKVDL-- 66 (304)
T ss_dssp EEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCS-----------TTHHHH-------HH-----HHHTTTCSE--
T ss_pred EEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccC-----------cchHHH-------HH-----HHhhcCCCE--
Confidence 34444433222224566778888887777766555432 122210 11 011123455
Q ss_pred cccccChhHHHHHHh------hCCcccccCc
Q 012735 344 FWTHNGWNSTLESIC------EGIPMICMPC 368 (457)
Q Consensus 344 ~I~hgG~~s~~eal~------~gvP~v~~P~ 368 (457)
+|.-||-||+.|++. .++|+.++|.
T Consensus 67 vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 67 IIVFGGDGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp EEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred EEEEccchHHHHHHHHHhhCCCCCcEEEecC
Confidence 999999999999865 5689999997
No 148
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=47.41 E-value=19 Score=28.50 Aligned_cols=35 Identities=14% Similarity=0.175 Sum_probs=29.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
..++++++.+. | +.|++++++.|.++|.+|+++ ..
T Consensus 23 ~~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~ 57 (158)
T 3lrx_A 23 FGKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HV 57 (158)
T ss_dssp CSEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EE
T ss_pred CCeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-Ee
Confidence 46788887776 3 899999999999999999999 53
No 149
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=47.08 E-value=25 Score=27.92 Aligned_cols=38 Identities=11% Similarity=0.253 Sum_probs=29.9
Q ss_pred CcEEEEEcCCCc---cCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQ---GHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~---gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
..+|+++|.-+. --..+.-.|++.|.++|.+|.|..++
T Consensus 23 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 63 (180)
T 1pno_A 23 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 63 (180)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 457888874432 23468899999999999999999986
No 150
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=46.67 E-value=17 Score=31.38 Aligned_cols=43 Identities=23% Similarity=0.256 Sum_probs=30.5
Q ss_pred CCCCCCcEEEEEc-CCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 1 MDQRKGRRLVLFP-LPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 1 ~~~~~~~~il~~~-~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
|..++.+.|.|+. -++-|-..-...||..|+++|++|.++-..
T Consensus 1 m~~~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D 44 (257)
T 1wcv_1 1 MLRAKVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLD 44 (257)
T ss_dssp ----CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCCCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 5543444455543 456699999999999999999999998765
No 151
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=45.72 E-value=24 Score=31.79 Aligned_cols=33 Identities=18% Similarity=0.391 Sum_probs=27.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.+||.|+..|..| ..+|+.|++.||+|+++..
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 35799999887777 5789999999999998765
No 152
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=45.62 E-value=1.5e+02 Score=25.60 Aligned_cols=31 Identities=19% Similarity=0.174 Sum_probs=24.7
Q ss_pred CeeEEE-eCCCc-chHHHHHhHcCCCeEEEecc
Q 012735 104 PIACLI-SDAML-PFTQAVADSLKLPRIVLRTG 134 (457)
Q Consensus 104 ~pDlvi-~D~~~-~~~~~~A~~l~iP~v~~~~~ 134 (457)
.||+|| .|+.. .-+..=|.++|||+|.+...
T Consensus 158 ~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 158 LPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190 (256)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCCEECCCT
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 789886 67654 56778899999999998765
No 153
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=45.31 E-value=26 Score=27.95 Aligned_cols=38 Identities=16% Similarity=0.178 Sum_probs=29.7
Q ss_pred CcEEEEEcCCCc---cCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQ---GHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~---gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
..+|+++|.-+. --..+.-.|++.|.++|.+|.|..++
T Consensus 22 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 22 ANSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp CSEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 457888874322 23468899999999999999999986
No 154
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=44.08 E-value=44 Score=30.56 Aligned_cols=26 Identities=19% Similarity=0.491 Sum_probs=20.9
Q ss_pred CCCCCCcccccChhHH---HHHHhhCCcccc
Q 012735 338 HPAVGAFWTHNGWNST---LESICEGIPMIC 365 (457)
Q Consensus 338 ~~~~~~~I~hgG~~s~---~eal~~gvP~v~ 365 (457)
+||+ +|++||+-+. ..|...|+|+++
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEE
Confidence 6888 9999998664 456778999986
No 155
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=43.91 E-value=1.3e+02 Score=28.64 Aligned_cols=90 Identities=14% Similarity=0.251 Sum_probs=52.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCCCCCccCHHHHHHHHHHhc
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSSHPHLTFHFIQENLSASEASTDDLVAFVSLLNTKC 85 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (457)
.+|++++..+ .-...+++.|.+.|-+|..+...... ....+.++.+....
T Consensus 312 gkrv~i~~~~-----~~~~~l~~~L~elG~~vv~v~~~~~~-------------------------~~~~~~~~~ll~~~ 361 (458)
T 1mio_B 312 GKKVALLGDP-----DEIIALSKFIIELGAIPKYVVTGTPG-------------------------MKFQKEIDAMLAEA 361 (458)
T ss_dssp TCEEEEEECH-----HHHHHHHHHHHTTTCEEEEEEESSCC-------------------------HHHHHHHHHHHHTT
T ss_pred CCEEEEEcCc-----hHHHHHHHHHHHCCCEEEEEEeCCCC-------------------------HHHHHHHHHHHHhc
Confidence 4567766543 45668888888899999887764210 00111122211111
Q ss_pred --------c-hhHHHHHHHHhhccCCCCeeEEEeCCCcchHHHHHhHcCCCeEEEe
Q 012735 86 --------L-VPFRDCLAKLLADVEEEPIACLISDAMLPFTQAVADSLKLPRIVLR 132 (457)
Q Consensus 86 --------~-~~~~~~l~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~l~iP~v~~~ 132 (457)
. .-+.+ +.+++++. +||++|.+.. ...+|+++|||++.+.
T Consensus 362 ~~~~~~v~~~~d~~~-l~~~i~~~---~pDl~ig~~~---~~~~a~k~gip~~~~~ 410 (458)
T 1mio_B 362 GIEGSKVKVEGDFFD-VHQWIKNE---GVDLLISNTY---GKFIAREENIPFVRFG 410 (458)
T ss_dssp TCCSCEEEESCBHHH-HHHHHHHS---CCSEEEESGG---GHHHHHHHTCCEEECS
T ss_pred CCCCCEEEECCCHHH-HHHHHHhc---CCCEEEeCcc---hHHHHHHcCCCEEEee
Confidence 0 11222 33333333 8999998863 5678899999999863
No 156
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=43.72 E-value=28 Score=27.75 Aligned_cols=38 Identities=11% Similarity=0.176 Sum_probs=30.0
Q ss_pred CcEEEEEcCCCc---cCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQ---GHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~---gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
..+|+++|.-+. --..+.-.|++.|.++|.+|.|..++
T Consensus 30 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 70 (186)
T 2bru_C 30 SHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHP 70 (186)
T ss_dssp CSEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECS
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 457888874432 23468899999999999999999986
No 157
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=43.34 E-value=13 Score=28.34 Aligned_cols=34 Identities=15% Similarity=0.217 Sum_probs=24.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+.++|+++..+.. ...+++.|.+.|++|+++...
T Consensus 5 ~~~~v~I~G~G~i-----G~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 5 KNKQFAVIGLGRF-----GGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp -CCSEEEECCSHH-----HHHHHHHHHHTTCCCEEEESC
T ss_pred cCCcEEEECCCHH-----HHHHHHHHHHCCCEEEEEeCC
Confidence 3457888865332 356789999999999988763
No 158
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=43.18 E-value=16 Score=33.90 Aligned_cols=30 Identities=20% Similarity=0.195 Sum_probs=24.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIH 41 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~ 41 (457)
|||+|+..+-- -+.+|..|+++|++|+++=
T Consensus 2 m~V~IVGaGpa-----Gl~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 2 MHVGIIGAGIG-----GTCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp CEEEEECCSHH-----HHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHH-----HHHHHHHHHhCCCCEEEEe
Confidence 78888876643 4889999999999999983
No 159
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=43.17 E-value=8.9 Score=19.28 Aligned_cols=17 Identities=24% Similarity=0.603 Sum_probs=14.4
Q ss_pred ChhHHHHHHhhCCcccc
Q 012735 349 GWNSTLESICEGIPMIC 365 (457)
Q Consensus 349 G~~s~~eal~~gvP~v~ 365 (457)
|.|+++..|..|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67889999999999865
No 160
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=43.13 E-value=34 Score=30.74 Aligned_cols=34 Identities=12% Similarity=0.147 Sum_probs=25.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+|+|+++...+ .--..|++.|.++||+|+.++..
T Consensus 13 ~M~ilVtGatG----~iG~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 13 HVKYAVLGATG----LLGHHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCEEEEESTTS----HHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCEEEEECCCc----HHHHHHHHHHHHCCCEEEEEecC
Confidence 46777765433 33467899999999999998864
No 161
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=42.90 E-value=1.2e+02 Score=29.58 Aligned_cols=35 Identities=20% Similarity=0.210 Sum_probs=25.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFN 45 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~ 45 (457)
.+|++++..+. -.+.+++.|.+.|-+|..+++.+.
T Consensus 335 GKrv~i~~~~~-----~~~~l~~~l~ElGm~vv~~~t~~~ 369 (533)
T 1mio_A 335 GKTACLYVGGS-----RSHTYMNMLKSFGVDSLVAGFEFA 369 (533)
T ss_dssp TCEEEEEESSS-----HHHHHHHHHHHHTCEEEEEEESSC
T ss_pred CCEEEEECCch-----HHHHHHHHHHHCCCEEEEEEeccC
Confidence 46787766543 255677888889999999887643
No 162
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=42.88 E-value=32 Score=31.00 Aligned_cols=42 Identities=19% Similarity=0.105 Sum_probs=33.6
Q ss_pred CCCC-cEEEEEc-CCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 012735 3 QRKG-RRLVLFP-LPLQGHISPMLQLANILHSQGFTITIIHTSF 44 (457)
Q Consensus 3 ~~~~-~~il~~~-~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 44 (457)
+.++ ++|+|++ -|+-|-..-...+|..|+++|++|.++....
T Consensus 9 ~~~gm~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 9 FNKGKTTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp CBTTBCEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCCCCeEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4444 4555555 5566999999999999999999999999864
No 163
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=42.87 E-value=1.2e+02 Score=29.16 Aligned_cols=33 Identities=18% Similarity=0.391 Sum_probs=23.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.+|++++..+. + ...+++.|.+.|-+|..+++.
T Consensus 332 GKrv~i~~~~~--~---~~~l~~~L~ElGmevv~~gt~ 364 (483)
T 3pdi_A 332 GKRVLLYTGGV--K---SWSVVSALQDLGMKVVATGTK 364 (483)
T ss_dssp TCEEEEECSSS--C---HHHHHHHHHHHTCEEEEECBS
T ss_pred CCEEEEECCCc--h---HHHHHHHHHHCCCEEEEEecC
Confidence 46888876553 3 346777888899999887764
No 164
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=42.84 E-value=35 Score=27.86 Aligned_cols=34 Identities=9% Similarity=0.111 Sum_probs=24.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.||++++.... | .--..+++.|+ +||+|+.+...
T Consensus 2 ~kM~vlVtGas--g--~iG~~~~~~l~-~g~~V~~~~r~ 35 (202)
T 3d7l_A 2 NAMKILLIGAS--G--TLGSAVKERLE-KKAEVITAGRH 35 (202)
T ss_dssp CSCEEEEETTT--S--HHHHHHHHHHT-TTSEEEEEESS
T ss_pred CCcEEEEEcCC--c--HHHHHHHHHHH-CCCeEEEEecC
Confidence 45676665433 3 34567899999 99999988763
No 165
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=42.81 E-value=1.8e+02 Score=28.20 Aligned_cols=33 Identities=21% Similarity=0.353 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.+|++++. .-.-.++|++.|.+.|-+|..+...
T Consensus 360 Gkrv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~ 392 (519)
T 1qgu_B 360 GKKFGLYG-----DPDFVMGLTRFLLELGCEPTVILSH 392 (519)
T ss_dssp TCEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeC
Confidence 46777774 3345678899999999999887774
No 166
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=42.79 E-value=97 Score=22.71 Aligned_cols=60 Identities=7% Similarity=0.092 Sum_probs=38.7
Q ss_pred CCcEEEEEcCCCccCHHH-HHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCC
Q 012735 5 KGRRLVLFPLPLQGHISP-MLQLANILHSQGFTITIIHTSFNSPNPSSHPHLTFHFIQENLS 65 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p-~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~i~~~~~ 65 (457)
+++||++++..|.|.-.- ...|-+.+.+.|.++.+-...... ......+++++.....+.
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~~~~~-~~~~~~~~DlIist~~l~ 80 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNE-IETYMDGVHLICTTARVD 80 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEECTTT-TTTSTTSCSEEEESSCCC
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEecHHH-HhhccCCCCEEEECCccc
Confidence 457899999999998774 677778888999987665543221 111123566665554443
No 167
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=42.71 E-value=29 Score=28.23 Aligned_cols=38 Identities=11% Similarity=0.253 Sum_probs=29.6
Q ss_pred CcEEEEEcCCCc---cCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQ---GHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~---gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
..+|+++|.-+. --.++.-.|++.|.++|.+|.|..++
T Consensus 46 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 86 (203)
T 2fsv_C 46 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 86 (203)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 357888874322 23467899999999999999999986
No 168
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=42.57 E-value=27 Score=31.17 Aligned_cols=32 Identities=16% Similarity=0.334 Sum_probs=27.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.+||.|+..+..|. ++|+.|.++||+|++.-.
T Consensus 3 M~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~dr 34 (300)
T 3obb_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (300)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred cCEEEEeeehHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 45899999998874 789999999999998743
No 169
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=42.48 E-value=30 Score=28.30 Aligned_cols=38 Identities=16% Similarity=0.177 Sum_probs=29.6
Q ss_pred CcEEEEEcCCCc---cCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQ---GHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~---gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
..+|+++|.-+. --..+.-.|++.|.++|.+|.|..++
T Consensus 45 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 85 (207)
T 1djl_A 45 ANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHP 85 (207)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCc
Confidence 357888874322 23467889999999999999999986
No 170
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=42.37 E-value=30 Score=28.78 Aligned_cols=33 Identities=9% Similarity=-0.002 Sum_probs=24.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
|||+++...+ .--..++++|.++||+|+.++-.
T Consensus 1 M~ilItGatG----~iG~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVGSTG----RVGKSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEESTTS----HHHHHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEECCCC----HHHHHHHHHHHHCCCEEEEEECC
Confidence 4666665333 23468999999999999999874
No 171
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=42.36 E-value=65 Score=29.48 Aligned_cols=35 Identities=9% Similarity=-0.003 Sum_probs=25.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++++|+++...+ .--..|+++|.++||+|+.+...
T Consensus 28 ~~~~vlVtGatG----~iG~~l~~~L~~~g~~V~~~~r~ 62 (379)
T 2c5a_A 28 ENLKISITGAGG----FIASHIARRLKHEGHYVIASDWK 62 (379)
T ss_dssp SCCEEEEETTTS----HHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCeEEEECCcc----HHHHHHHHHHHHCCCeEEEEECC
Confidence 456777664433 33467899999999999998764
No 172
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=41.83 E-value=29 Score=30.88 Aligned_cols=38 Identities=11% Similarity=0.097 Sum_probs=31.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.+.|+|..-|+-|=..-...||..|+++|+.|.++-..
T Consensus 41 ~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D 78 (307)
T 3end_A 41 AKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCD 78 (307)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 44566666667799999999999999999999998765
No 173
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=41.41 E-value=12 Score=33.50 Aligned_cols=36 Identities=19% Similarity=0.352 Sum_probs=26.8
Q ss_pred CCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHC-----C-CeEEEEeC
Q 012735 1 MDQRKGRRLVLFPLPLQGHISPMLQLANILHSQ-----G-FTITIIHT 42 (457)
Q Consensus 1 ~~~~~~~~il~~~~~~~gH~~p~l~la~~L~~~-----G-h~Vt~~~~ 42 (457)
|+ +.+|||.|+..|..|. .+|..|.+. | |+|+++..
T Consensus 4 m~-~~~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 4 MN-QQPIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp ----CCEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CC-CCCCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEc
Confidence 44 3568999998777663 668888888 9 99999865
No 174
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=41.37 E-value=19 Score=32.47 Aligned_cols=31 Identities=16% Similarity=0.363 Sum_probs=25.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEE
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITII 40 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~ 40 (457)
.++||+++..|+.| ..+|..|++.||+|+++
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILI 48 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEE
Confidence 46899999887766 56889999999999999
No 175
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=41.16 E-value=1.3e+02 Score=23.73 Aligned_cols=137 Identities=14% Similarity=0.152 Sum_probs=75.2
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCCCC
Q 012735 263 SVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVG 342 (457)
Q Consensus 263 ~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~ 342 (457)
+.|-|-+||.. +....++....++..+...-+.+... +++|+.+.+.. ....--..+++
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~sa--------HR~p~~~~~~~----------~~a~~~~~~~V- 61 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSA--------HKTAEHVVSML----------KEYEALDRPKL- 61 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT--------TTCHHHHHHHH----------HHHHTSCSCEE-
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc--------cCCHHHHHHHH----------HHhhhcCCCcE-
Confidence 34667788877 56778888888998888776666553 45777663211 11110001344
Q ss_pred CcccccCh----hHHHHHHhhCCcccccCccchh---hHHHHHHH-hhhccceec-CCCCCHHHHHHHHHHHhcccchHH
Q 012735 343 AFWTHNGW----NSTLESICEGIPMICMPCFTDQ---KVNARYVS-DVWKVGLQL-ENGLKREEIEKTIRRVMVEKQGEE 413 (457)
Q Consensus 343 ~~I~hgG~----~s~~eal~~gvP~v~~P~~~DQ---~~na~~v~-~~lG~g~~l-~~~~~~~~l~~ai~~il~~~~~~~ 413 (457)
+|.-.|. .++..++ .-+|+|.+|...-. .+.--.++ -. |+.+.- +...++..++..| --+.| +.
T Consensus 62 -iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dLlS~vqmp~-GvpVatv~~~~nAa~lA~~I-l~~~d---~~ 134 (159)
T 3rg8_A 62 -YITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGADIYSSLRMPS-GISPALVLEPKNAALLAARI-FSLYD---KE 134 (159)
T ss_dssp -EEEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTHHHHHHCCCT-TCCCEECCSHHHHHHHHHHH-HTTTC---HH
T ss_pred -EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCccHHHHHhCCC-CCceEEecCchHHHHHHHHH-HhCCC---HH
Confidence 7777664 3555554 57899999964221 11111111 11 333221 2223333333333 12456 78
Q ss_pred HHHHHHHHHHHHHH
Q 012735 414 IRSRIFRLKEKANH 427 (457)
Q Consensus 414 ~~~~a~~l~~~~~~ 427 (457)
++++.+..+++.++
T Consensus 135 l~~kl~~~r~~~~~ 148 (159)
T 3rg8_A 135 IADSVKSYMESNAQ 148 (159)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888887763
No 176
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=40.99 E-value=35 Score=26.35 Aligned_cols=33 Identities=12% Similarity=0.118 Sum_probs=28.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEE
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITII 40 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~ 40 (457)
..+++++..+. =+.|++++++.|.++|.+|+++
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~ 50 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL 50 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE
Confidence 46788887665 3899999999999999999998
No 177
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=40.56 E-value=27 Score=31.33 Aligned_cols=32 Identities=19% Similarity=0.274 Sum_probs=26.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+++|+++..+ ....+++++.++||+|.++...
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~ 33 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSS 33 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECC
Confidence 4789988876 5678999999999999988764
No 178
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=40.44 E-value=33 Score=30.35 Aligned_cols=34 Identities=18% Similarity=0.088 Sum_probs=25.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+++|+++...+ .--..|+++|.++||+|+.++..
T Consensus 7 ~~~vlVtGatG----~iG~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 7 KHRILITGGAG----FIGGHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp CCEEEEETTTS----HHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCeEEEECCCC----hHHHHHHHHHHHCCCEEEEEecC
Confidence 56777665433 33457899999999999998764
No 179
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=40.32 E-value=57 Score=28.69 Aligned_cols=33 Identities=15% Similarity=0.137 Sum_probs=23.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
|||++....+ .--..|+++|.++||+|+.+...
T Consensus 1 m~vlVtGatG----~iG~~l~~~L~~~g~~V~~~~r~ 33 (312)
T 3ko8_A 1 MRIVVTGGAG----FIGSHLVDKLVELGYEVVVVDNL 33 (312)
T ss_dssp CEEEEETTTS----HHHHHHHHHHHHTTCEEEEECCC
T ss_pred CEEEEECCCC----hHHHHHHHHHHhCCCEEEEEeCC
Confidence 4666554433 23457899999999999988753
No 180
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=40.24 E-value=41 Score=27.57 Aligned_cols=40 Identities=8% Similarity=0.096 Sum_probs=26.0
Q ss_pred CCCCCcEEEEEcCCCccC----HHHHHHHHHHHHHCCCeEEEEeC
Q 012735 2 DQRKGRRLVLFPLPLQGH----ISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 2 ~~~~~~~il~~~~~~~gH----~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.+..+++|.+++... +. ..-...|++.|+++|+.|..-..
T Consensus 9 ~~~~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG 52 (189)
T 3sbx_A 9 DEPGRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGG 52 (189)
T ss_dssp ----CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCB
T ss_pred CCCCCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 345678898887655 43 34467788889999998766543
No 181
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=40.20 E-value=35 Score=28.92 Aligned_cols=23 Identities=13% Similarity=0.216 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHCCCeEEEEeCC
Q 012735 21 SPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 21 ~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.-..++|++|+++|++|+++..+
T Consensus 35 ~iG~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 35 KMGFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHHCCCEEEEEECC
Confidence 45678999999999999998764
No 182
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=40.04 E-value=23 Score=31.74 Aligned_cols=32 Identities=13% Similarity=0.203 Sum_probs=26.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+||+++..|+.|- .+|..|++.||+|+++...
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcC
Confidence 6899998888774 5688999999999999874
No 183
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=40.01 E-value=7.9 Score=37.15 Aligned_cols=35 Identities=20% Similarity=0.268 Sum_probs=28.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 4 RKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+..|||+++..|-.| ..||+.|.+.||+|+++-..
T Consensus 1 ~~~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 1 SNAMKIIILGAGQVG-----GTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp -CCEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESC
T ss_pred CCcCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 357999999887655 46999999999999998764
No 184
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=40.00 E-value=20 Score=31.93 Aligned_cols=32 Identities=22% Similarity=0.355 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
++||+|+..|..| ..+|..|.++||+|+++..
T Consensus 3 ~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEEC
Confidence 4789999776555 4678999999999999865
No 185
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=39.83 E-value=34 Score=29.84 Aligned_cols=46 Identities=20% Similarity=0.186 Sum_probs=31.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCeeEEec
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSSHPHLTFHFI 60 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~i 60 (457)
+++|+++. + | .--..|++.|.++||+|+.++..... .. .++.++..
T Consensus 3 ~~~ilVtG--a-G--~iG~~l~~~L~~~g~~V~~~~r~~~~--~~--~~~~~~~~ 48 (286)
T 3gpi_A 3 LSKILIAG--C-G--DLGLELARRLTAQGHEVTGLRRSAQP--MP--AGVQTLIA 48 (286)
T ss_dssp CCCEEEEC--C-S--HHHHHHHHHHHHTTCCEEEEECTTSC--CC--TTCCEEEC
T ss_pred CCcEEEEC--C-C--HHHHHHHHHHHHCCCEEEEEeCCccc--cc--cCCceEEc
Confidence 46788774 4 5 45568899999999999999874221 11 45666544
No 186
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=39.81 E-value=29 Score=25.46 Aligned_cols=41 Identities=12% Similarity=0.037 Sum_probs=28.7
Q ss_pred CCCCCcEEEEEcCCCccCHHHHH-HHHHHHHHCCCe-EEEEeC
Q 012735 2 DQRKGRRLVLFPLPLQGHISPML-QLANILHSQGFT-ITIIHT 42 (457)
Q Consensus 2 ~~~~~~~il~~~~~~~gH~~p~l-~la~~L~~~Gh~-Vt~~~~ 42 (457)
...+++||++++..+.|.-.-.. .|-+.+.++|.+ +.+-..
T Consensus 14 ~~~~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~~ 56 (110)
T 3czc_A 14 GRGSMVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESASC 56 (110)
T ss_dssp ----CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred cccCCcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 44456789999999988877776 677778888987 655443
No 187
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=39.50 E-value=75 Score=26.63 Aligned_cols=110 Identities=10% Similarity=0.112 Sum_probs=0.0
Q ss_pred CCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCC---CCCCCeeEEecCCCCCCCCCCccCHHHH
Q 012735 1 MDQRKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNP---SSHPHLTFHFIQENLSASEASTDDLVAF 77 (457)
Q Consensus 1 ~~~~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~---~~~~g~~~~~i~~~~~~~~~~~~~~~~~ 77 (457)
|+ .+++||+++.++..+-+..++.-.+.= .+++|..+.+....... ....|+.+..++..-.
T Consensus 1 ~~-~~~~riavl~SG~Gsnl~all~~~~~~--~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~~~~~------------ 65 (215)
T 3tqr_A 1 MN-REPLPIVVLISGNGTNLQAIIGAIQKG--LAIEIRAVISNRADAYGLKRAQQADIPTHIIPHEEF------------ 65 (215)
T ss_dssp ----CCEEEEEEESSCCHHHHHHHHHHHTT--CSEEEEEEEESCTTCHHHHHHHHTTCCEEECCGGGS------------
T ss_pred CC-CCCcEEEEEEeCCcHHHHHHHHHHHcC--CCCEEEEEEeCCcchHHHHHHHHcCCCEEEeCcccc------------
Q ss_pred HHHHHHhcchhHHHHHHHHhhccCCCCeeEEEeCCCc-chHHHHHhHcCCCeEEEecc
Q 012735 78 VSLLNTKCLVPFRDCLAKLLADVEEEPIACLISDAML-PFTQAVADSLKLPRIVLRTG 134 (457)
Q Consensus 78 ~~~~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~-~~~~~~A~~l~iP~v~~~~~ 134 (457)
.....+.+.+.+.+++. +||+||+-.+. .-...+-+...-.++-++++
T Consensus 66 ------~~r~~~d~~~~~~l~~~---~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 66 ------PSRTDFESTLQKTIDHY---DPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp ------SSHHHHHHHHHHHHHTT---CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ------CchhHhHHHHHHHHHhc---CCCEEEEccchhhCCHHHHhhccCCeEEeCcc
No 188
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=38.89 E-value=22 Score=32.22 Aligned_cols=32 Identities=19% Similarity=0.276 Sum_probs=27.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.+||.|+..|..| ..+|..|.+.||+|+++..
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r 45 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWAR 45 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 5789999887666 5789999999999999875
No 189
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=38.85 E-value=1.1e+02 Score=25.37 Aligned_cols=105 Identities=6% Similarity=0.052 Sum_probs=55.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCC-CCCCC--CCCCCeeEEecCCCCCCCCCCccCHHHHHHH
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQ--GFTITIIHTSF-NSPNP--SSHPHLTFHFIQENLSASEASTDDLVAFVSL 80 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~~~-~~~~~--~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~ 80 (457)
++||.++.+++. + -+.++.++|.+. +|+|..+.+.. ..... ....|+.+..++..- . .+
T Consensus 3 m~ki~vl~sG~g-~--~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~~---~---~~------- 66 (212)
T 3av3_A 3 MKRLAVFASGSG-T--NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPKD---Y---PS------- 66 (212)
T ss_dssp CEEEEEECCSSC-H--HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGGG---S---SS-------
T ss_pred CcEEEEEEECCc-H--HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCccc---c---cc-------
Confidence 358887777763 3 366777888877 78988766631 11110 111455555443210 0 00
Q ss_pred HHHhcchhHHHHHHHHhhccCCCCeeEEEeCCCc-chHHHHHhHcCCCeEEEecc
Q 012735 81 LNTKCLVPFRDCLAKLLADVEEEPIACLISDAML-PFTQAVADSLKLPRIVLRTG 134 (457)
Q Consensus 81 ~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~-~~~~~~A~~l~iP~v~~~~~ 134 (457)
...+.+.+.+.++.. +||+||+-.+. .-...+-+...-.++-++++
T Consensus 67 -----~~~~~~~~~~~l~~~---~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 67 -----KAAFESEILRELKGR---QIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp -----HHHHHHHHHHHHHHT---TCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred -----hhhhHHHHHHHHHhc---CCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 111222222222222 89999987653 33444455566678877765
No 190
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=38.51 E-value=17 Score=37.15 Aligned_cols=113 Identities=8% Similarity=-0.012 Sum_probs=78.3
Q ss_pred ccccChHhhhcCCCCCCcccccChhHHHHHHhhCCcccccCccchhhHHHHHHHhhhccceecC-----C-CCCHHHHHH
Q 012735 327 VKWAPQQEVLAHPAVGAFWTHNGWNSTLESICEGIPMICMPCFTDQKVNARYVSDVWKVGLQLE-----N-GLKREEIEK 400 (457)
Q Consensus 327 ~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~-----~-~~~~~~l~~ 400 (457)
.++.+-.++|..+|+ +||=- ++.+.|.+..++|+|....-.|+... ... |.=.... . -.+.++|.+
T Consensus 604 ~~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~----~~r-g~y~d~~~~~pg~~~~~~~eL~~ 675 (729)
T 3l7i_A 604 SNYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDK----GLR-GFYMNYMEDLPGPIYTEPYGLAK 675 (729)
T ss_dssp TTCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTS----SCC-SBSSCTTSSSSSCEESSHHHHHH
T ss_pred CCCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhh----ccC-CcccChhHhCCCCeECCHHHHHH
Confidence 356667789988888 99874 45889999999999988776666432 111 4322221 1 358899999
Q ss_pred HHHHHhcccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcc
Q 012735 401 TIRRVMVEKQGEEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILSLE 450 (457)
Q Consensus 401 ai~~il~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (457)
+|.....+. ..|+++.+++.+++-. ..+|.++++.++.+.+....-+
T Consensus 676 ~i~~~~~~~--~~~~~~~~~~~~~~~~-~~dg~as~ri~~~i~~~~~~~~ 722 (729)
T 3l7i_A 676 ELKNLDKVQ--QQYQEKIDAFYDRFCS-VDNGKASQYIGDLIHKDIKEQL 722 (729)
T ss_dssp HHTTHHHHH--HHTHHHHHHHHHHHST-TCCSCHHHHHHHHHHHHHHHHC
T ss_pred HHhhhhccc--hhHHHHHHHHHHHhCC-ccCChHHHHHHHHHHhcCcCcc
Confidence 998877531 5688888888888753 2467778888888877665433
No 191
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=38.38 E-value=26 Score=30.65 Aligned_cols=35 Identities=3% Similarity=0.002 Sum_probs=24.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 4 RKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
++.++|++....+ .--..|+++|.++||+|+.++.
T Consensus 10 ~~~~~vlVtGatG----~iG~~l~~~L~~~g~~V~~~~r 44 (292)
T 1vl0_A 10 HHHMKILITGANG----QLGREIQKQLKGKNVEVIPTDV 44 (292)
T ss_dssp --CEEEEEESTTS----HHHHHHHHHHTTSSEEEEEECT
T ss_pred cccceEEEECCCC----hHHHHHHHHHHhCCCeEEeccC
Confidence 4456777665444 3456789999999999998765
No 192
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=38.24 E-value=22 Score=31.92 Aligned_cols=32 Identities=13% Similarity=0.259 Sum_probs=26.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+||+++..|+.| ..+|..|++.||+|+++...
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIG-----SFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 689999887766 46788999999999999874
No 193
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=38.23 E-value=47 Score=27.50 Aligned_cols=37 Identities=14% Similarity=0.143 Sum_probs=29.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+..++++..+..|+-.-+..+++.|+++|+.|..+-.
T Consensus 31 ~~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 31 PLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp CEEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 3456777777778878899999999999999877765
No 194
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=38.09 E-value=9.8 Score=33.18 Aligned_cols=53 Identities=13% Similarity=0.137 Sum_probs=39.0
Q ss_pred CCCCCCcccccChhHHHHHHhh---CCcccccCccchhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHhcc
Q 012735 338 HPAVGAFWTHNGWNSTLESICE---GIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVMVE 408 (457)
Q Consensus 338 ~~~~~~~I~hgG~~s~~eal~~---gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~~ 408 (457)
.+++ +|+-||=||+++++.. ++|++.++.. . +|.-. .+.++++.++++.+++.
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~G-----------~-~Gfl~----~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKAG-----------R-LGFLT----SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEESS-----------S-CCSSC----CBCGGGHHHHHHHHHTT
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEECC-----------C-CCccC----cCCHHHHHHHHHHHHcC
Confidence 3566 9999999999999886 7888777632 1 23222 34678888888888875
No 195
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=37.94 E-value=30 Score=30.72 Aligned_cols=30 Identities=20% Similarity=0.454 Sum_probs=24.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
||.|+..+..|. ++|+.|+++||+|+++-.
T Consensus 7 kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~dr 36 (297)
T 4gbj_A 7 KIAFLGLGNLGT-----PIAEILLEAGYELVVWNR 36 (297)
T ss_dssp EEEEECCSTTHH-----HHHHHHHHTTCEEEEC--
T ss_pred cEEEEecHHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 799999888774 789999999999998653
No 196
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=37.88 E-value=37 Score=28.59 Aligned_cols=33 Identities=9% Similarity=0.143 Sum_probs=24.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+|.++++.++. .--.++|++|+++|++|.+...
T Consensus 2 ~k~vlITGas~---gIG~~ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 2 MKVAVITGASR---GIGEAIARALARDGYALALGAR 34 (235)
T ss_dssp CCEEEEESCSS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCc---HHHHHHHHHHHHCCCEEEEEeC
Confidence 35566665553 2467899999999999888765
No 197
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=37.74 E-value=37 Score=24.84 Aligned_cols=27 Identities=22% Similarity=0.201 Sum_probs=22.2
Q ss_pred ccCHHHHHHHHHHHHHC-CC-eEEEEeCC
Q 012735 17 QGHISPMLQLANILHSQ-GF-TITIIHTS 43 (457)
Q Consensus 17 ~gH~~p~l~la~~L~~~-Gh-~Vt~~~~~ 43 (457)
.......+.+|..+.+. || +|+++...
T Consensus 15 ~~~~~~al~~a~~~~~~~g~~~v~vff~~ 43 (117)
T 1jx7_A 15 SESLFNSLRLAIALREQESNLDLRLFLMS 43 (117)
T ss_dssp CSHHHHHHHHHHHHHHHCTTCEEEEEECG
T ss_pred cHHHHHHHHHHHHHHhcCCCccEEEEEEc
Confidence 35566789999999999 99 99988875
No 198
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=37.58 E-value=22 Score=32.10 Aligned_cols=38 Identities=18% Similarity=0.298 Sum_probs=26.3
Q ss_pred CCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 1 MDQRKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 1 ~~~~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
|...+.+||.|+..|..| .++|..|+++||+|+++...
T Consensus 1 m~~~~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 1 MASPAAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp ------CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSC
T ss_pred CCCCCCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 444456789999877655 47899999999999987653
No 199
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=37.52 E-value=37 Score=28.52 Aligned_cols=110 Identities=7% Similarity=-0.001 Sum_probs=0.0
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCC--CCeeEEecCCCCCCCCCCccCHHHHHH
Q 012735 2 DQRKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSSH--PHLTFHFIQENLSASEASTDDLVAFVS 79 (457)
Q Consensus 2 ~~~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~--~g~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (457)
.|..++||+|+.++..+-+..++.-.+. ..+++|..+.+.......+.. .|+.+..++..-...
T Consensus 8 ~~~~~~ri~vl~SG~gsnl~all~~~~~--~~~~eI~~Vis~~~a~~~~~A~~~gIp~~~~~~~~~~~------------ 73 (215)
T 3da8_A 8 PPSAPARLVVLASGTGSLLRSLLDAAVG--DYPARVVAVGVDRECRAAEIAAEASVPVFTVRLADHPS------------ 73 (215)
T ss_dssp CCCSSEEEEEEESSCCHHHHHHHHHSST--TCSEEEEEEEESSCCHHHHHHHHTTCCEEECCGGGSSS------------
T ss_pred CCCCCcEEEEEEeCChHHHHHHHHHHhc--cCCCeEEEEEeCCchHHHHHHHHcCCCEEEeCcccccc------------
Q ss_pred HHHHhcchhHHHHHHHHhhccCCCCeeEEEeCCCc-chHHHHHhHcCCCeEEEecc
Q 012735 80 LLNTKCLVPFRDCLAKLLADVEEEPIACLISDAML-PFTQAVADSLKLPRIVLRTG 134 (457)
Q Consensus 80 ~~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~-~~~~~~A~~l~iP~v~~~~~ 134 (457)
...+.+.+.+.+++. +||+||+-.+. .-...+-+...-.++-++++
T Consensus 74 ------r~~~d~~~~~~l~~~---~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpS 120 (215)
T 3da8_A 74 ------RDAWDVAITAATAAH---EPDLVVSAGFMRILGPQFLSRFYGRTLNTHPA 120 (215)
T ss_dssp ------HHHHHHHHHHHHHTT---CCSEEEEEECCSCCCHHHHHHHTTTEEEEESS
T ss_pred ------hhhhhHHHHHHHHhh---CCCEEEEcCchhhCCHHHHhhccCCeEEeCcc
No 200
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=37.47 E-value=15 Score=35.10 Aligned_cols=99 Identities=13% Similarity=0.029 Sum_probs=50.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCeeEEecC--CCCCCCCC---CccCHHHHHHH
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSSHPHLTFHFIQ--ENLSASEA---STDDLVAFVSL 80 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~i~--~~~~~~~~---~~~~~~~~~~~ 80 (457)
++|-+|++. ++=.-++.+|+.|.+.|.++. .|.. -...... .|+.+..+. .++|+-.+ .+-.+. +...
T Consensus 9 ~i~~aLISV---sDK~glvelAk~L~~lGfeI~-ATgG-Tak~L~e-~GI~v~~V~~vTgfPEil~GRVKTLHP~-ihgG 81 (523)
T 3zzm_A 9 PIRRALISV---YDKTGLVDLAQGLSAAGVEII-STGS-TAKTIAD-TGIPVTPVEQLTGFPEVLDGRVKTLHPR-VHAG 81 (523)
T ss_dssp CCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE-ECHH-HHHHHHT-TTCCCEEHHHHHSCCCCTTTTSSSCSHH-HHHH
T ss_pred cccEEEEEE---eccccHHHHHHHHHHCCCEEE-Ecch-HHHHHHH-cCCceeeccccCCCchhhCCccccCCch-hhhh
Confidence 444455554 344558899999999999864 3332 2122211 577777765 25555432 333332 2222
Q ss_pred HHHhcchhHHHHHHHHhhccCCCCeeEEEeCCCc
Q 012735 81 LNTKCLVPFRDCLAKLLADVEEEPIACLISDAML 114 (457)
Q Consensus 81 ~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~ 114 (457)
++..- -..+.++++.+..-. ..|+||++.+-
T Consensus 82 iLa~r--~~~~h~~~l~~~~i~-~iDlVvvNLYP 112 (523)
T 3zzm_A 82 LLADL--RKSEHAAALEQLGIE-AFELVVVNLYP 112 (523)
T ss_dssp HHCCT--TSHHHHHHHHHHTCC-CCSEEEEECCC
T ss_pred hccCC--CCHHHHHHHHHCCCC-ceeEEEEeCCC
Confidence 22211 111223333322223 89999999654
No 201
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=37.43 E-value=39 Score=28.99 Aligned_cols=34 Identities=15% Similarity=0.002 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.|+++++.++.| --.++|+.|+++|++|.++..
T Consensus 6 ~~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r 39 (252)
T 3h7a_A 6 RNATVAVIGAGDY---IGAEIAKKFAAEGFTVFAGRR 39 (252)
T ss_dssp CSCEEEEECCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 4456666665542 467999999999999988765
No 202
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=37.26 E-value=46 Score=29.06 Aligned_cols=34 Identities=24% Similarity=0.282 Sum_probs=25.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.|+++++.++. .--.++|++|+++|++|.++..
T Consensus 28 ~~k~~lVTGas~---GIG~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 28 ARPVAIVTGGRR---GIGLGIARALAASGFDIAITGI 61 (280)
T ss_dssp CCCEEEEETTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEecCCC---HHHHHHHHHHHHCCCeEEEEeC
Confidence 456667766654 3457899999999999998874
No 203
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=37.24 E-value=24 Score=30.98 Aligned_cols=32 Identities=13% Similarity=0.074 Sum_probs=25.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
|||.|+..|..| ..+|..|.++||+|+++...
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 478888776555 47899999999999998663
No 204
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=37.18 E-value=34 Score=33.62 Aligned_cols=39 Identities=10% Similarity=0.094 Sum_probs=36.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++.+|++.+.++-.|-....-++..|..+|++|..++..
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~ 135 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVM 135 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSS
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCC
Confidence 478999999999999999999999999999999998874
No 205
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=37.15 E-value=51 Score=24.92 Aligned_cols=34 Identities=12% Similarity=0.064 Sum_probs=24.7
Q ss_pred EEEcCCCc--cCHHHHHHHHHHHHHCCCeE-EEEeCC
Q 012735 10 VLFPLPLQ--GHISPMLQLANILHSQGFTI-TIIHTS 43 (457)
Q Consensus 10 l~~~~~~~--gH~~p~l~la~~L~~~Gh~V-t~~~~~ 43 (457)
+++..+.+ ......+.+|.++.+.||+| +++-..
T Consensus 5 iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~ 41 (130)
T 2hy5_A 5 LQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYH 41 (130)
T ss_dssp EEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred EEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEec
Confidence 33444444 34566788999999999999 887764
No 206
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=37.03 E-value=26 Score=29.22 Aligned_cols=33 Identities=15% Similarity=0.281 Sum_probs=25.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.+++|.|+..+..| ..+|+.|.++||+|+++..
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 46789988765544 5789999999999998865
No 207
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=36.94 E-value=2e+02 Score=26.32 Aligned_cols=89 Identities=9% Similarity=-0.032 Sum_probs=53.5
Q ss_pred cEEEEEcCCCcc-CHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCCCCCccCHHHHHHHHHHhc
Q 012735 7 RRLVLFPLPLQG-HISPMLQLANILHSQGFTITIIHTSFNSPNPSSHPHLTFHFIQENLSASEASTDDLVAFVSLLNTKC 85 (457)
Q Consensus 7 ~~il~~~~~~~g-H~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (457)
.++++++.|+.+ .-..+..+.+.|.+.|.+|.+.+............++.+...-
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~~~~~~v~~~~~~------------------------ 276 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQGRRVVLSSGWAGLGRIDEGDDCLVVGEV------------------------ 276 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHTTCCEEEECTTTTCCCSSCCTTEEEESSC------------------------
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCcccccccCCCCEEEecCC------------------------
Confidence 356777888776 4555777888999999999888764222111111233222110
Q ss_pred chhHHHHHHHHhhccCCCCeeEEEeCCCcchHHHHHhHcCCCeEEE
Q 012735 86 LVPFRDCLAKLLADVEEEPIACLISDAMLPFTQAVADSLKLPRIVL 131 (457)
Q Consensus 86 ~~~~~~~l~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~l~iP~v~~ 131 (457)
. ..+++. +.|++|+.... .+..-|-..|+|.+.+
T Consensus 277 -~-----~~~ll~-----~~d~~v~~gG~-~t~~Eal~~GvP~v~~ 310 (404)
T 3h4t_A 277 -N-----HQVLFG-----RVAAVVHHGGA-GTTTAVTRAGAPQVVV 310 (404)
T ss_dssp -C-----HHHHGG-----GSSEEEECCCH-HHHHHHHHHTCCEEEC
T ss_pred -C-----HHHHHh-----hCcEEEECCcH-HHHHHHHHcCCCEEEc
Confidence 0 112332 45999998744 3455666779999986
No 208
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=36.91 E-value=49 Score=29.88 Aligned_cols=68 Identities=10% Similarity=-0.105 Sum_probs=43.0
Q ss_pred HHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCCCCCcccccChhHHHHHH
Q 012735 278 AEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVGAFWTHNGWNSTLESI 357 (457)
Q Consensus 278 ~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~eal 357 (457)
+.++.+...++..+..+.+..... +....+ + . ...+....++ +|.-||=||+.|++
T Consensus 44 ~~~~~i~~~l~~~g~~~~~~~t~~-----------~~~~~~-------~---~-~~~~~~~~d~--vvv~GGDGTl~~v~ 99 (332)
T 2bon_A 44 LPLREAIMLLREEGMTIHVRVTWE-----------KGDAAR-------Y---V-EEARKFGVAT--VIAGGGDGTINEVS 99 (332)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECCS-----------TTHHHH-------H---H-HHHHHHTCSE--EEEEESHHHHHHHH
T ss_pred chHHHHHHHHHHcCCcEEEEEecC-----------cchHHH-------H---H-HHHHhcCCCE--EEEEccchHHHHHH
Confidence 556778888888887776655332 111110 0 0 1122234566 99999999999986
Q ss_pred h--------hCCcccccCcc
Q 012735 358 C--------EGIPMICMPCF 369 (457)
Q Consensus 358 ~--------~gvP~v~~P~~ 369 (457)
. .++|+.++|..
T Consensus 100 ~~l~~~~~~~~~plgiiP~G 119 (332)
T 2bon_A 100 TALIQCEGDDIPALGILPLG 119 (332)
T ss_dssp HHHHHCCSSCCCEEEEEECS
T ss_pred HHHhhcccCCCCeEEEecCc
Confidence 4 46798889973
No 209
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=36.84 E-value=21 Score=32.83 Aligned_cols=34 Identities=15% Similarity=0.159 Sum_probs=28.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.++||.|+..|..| .++|..|++.||+|++....
T Consensus 28 ~~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 28 FKHPIAILGAGSWG-----TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSC
T ss_pred cCCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 46799999887766 46899999999999998864
No 210
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=36.59 E-value=47 Score=29.87 Aligned_cols=35 Identities=14% Similarity=0.156 Sum_probs=24.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++++|+++...+ .--..|+++|.++||+|+.+...
T Consensus 26 ~~~~vlVtGatG----~iG~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 26 DRKRILITGGAG----FVGSHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp -CCEEEEETTTS----HHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEEcCcc----HHHHHHHHHHHHCCCEEEEEeCC
Confidence 456776664433 33467899999999999998753
No 211
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=36.53 E-value=12 Score=33.50 Aligned_cols=56 Identities=13% Similarity=0.077 Sum_probs=35.8
Q ss_pred hhcCCCCCCcccccChhHHHHHHhh----CCcccccCccchhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHhcc
Q 012735 335 VLAHPAVGAFWTHNGWNSTLESICE----GIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVMVE 408 (457)
Q Consensus 335 lL~~~~~~~~I~hgG~~s~~eal~~----gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~~ 408 (457)
+...+++ +|.-||-||+++++.. ++|++.++.. . +|.= . .+.++++.++++.+++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~G-----------~-~gfl--~--~~~~~~~~~~~~~i~~g 131 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNLG-----------R-IGFL--A--EAEAEAIDAVLEHVVAQ 131 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEECS-----------S-CCSS--C--SEEGGGHHHHHHHHHHT
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeCC-----------C-CccC--c--ccCHHHHHHHHHHHHcC
Confidence 3445666 9999999999999864 8899888742 1 2211 1 23466677777777654
No 212
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=36.34 E-value=49 Score=29.77 Aligned_cols=34 Identities=6% Similarity=-0.095 Sum_probs=25.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+++|+++...+ . --..|++.|.++||+|+.++..
T Consensus 25 ~~~vlVtGatG--~--iG~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 25 PKTWLITGVAG--F--IGSNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp CCEEEEETTTS--H--HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCeEEEECCCc--H--HHHHHHHHHHHCCCEEEEEeCC
Confidence 46777765433 2 3467899999999999998864
No 213
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=36.33 E-value=13 Score=31.24 Aligned_cols=32 Identities=16% Similarity=0.271 Sum_probs=24.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
|||+++..+ . -...+|+.|.++||+|+++...
T Consensus 1 M~iiIiG~G---~--~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGGE---T--TAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECCH---H--HHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECCC---H--HHHHHHHHHHhCCCeEEEEECC
Confidence 467777643 2 3457899999999999999864
No 214
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=36.23 E-value=23 Score=29.63 Aligned_cols=33 Identities=15% Similarity=0.159 Sum_probs=23.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.++|+|+..|..| ..+++.|.+.||+|+++..
T Consensus 27 ~~~~I~iiG~G~~G-----~~la~~l~~~g~~V~~~~r 59 (215)
T 2vns_A 27 EAPKVGILGSGDFA-----RSLATRLVGSGFKVVVGSR 59 (215)
T ss_dssp --CCEEEECCSHHH-----HHHHHHHHHTTCCEEEEES
T ss_pred CCCEEEEEccCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 45789998654333 4678899999999988765
No 215
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=36.08 E-value=30 Score=30.92 Aligned_cols=33 Identities=18% Similarity=0.290 Sum_probs=26.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.+||.|+..|..| ..+|+.|+++||+|+++..
T Consensus 20 ~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 20 HMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 45789999766544 6789999999999998765
No 216
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=36.02 E-value=1.6e+02 Score=23.35 Aligned_cols=141 Identities=9% Similarity=0.065 Sum_probs=78.5
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCCCC
Q 012735 263 SVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVG 342 (457)
Q Consensus 263 ~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~ 342 (457)
+.|-|-+||.. +....++....++..+...-+.+... .+.|+.+.+.. .. +....++
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa--------HRtp~~l~~~~----------~~---~~~~g~~ 62 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSA--------HRTPDKMFDYA----------ET---AKERGLK 62 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT--------TTCHHHHHHHH----------HH---TTTTTCC
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcC--------cCCHHHHHHHH----------HH---HHhCCCc
Confidence 45777788887 56778888889998888766666553 44777663211 11 1112233
Q ss_pred CcccccCh----hHHHHHHhhCCcccccCccchhh-HHHH---HHHhhhccceecCCCCCH-HHHHHHHH--HH--hccc
Q 012735 343 AFWTHNGW----NSTLESICEGIPMICMPCFTDQK-VNAR---YVSDVWKVGLQLENGLKR-EEIEKTIR--RV--MVEK 409 (457)
Q Consensus 343 ~~I~hgG~----~s~~eal~~gvP~v~~P~~~DQ~-~na~---~v~~~lG~g~~l~~~~~~-~~l~~ai~--~i--l~~~ 409 (457)
.+|.-.|. .++..++. -+|+|.+|...... .... .++-.-|+++..- .+.. .....++- +| +.|
T Consensus 63 ViIa~AG~aa~LpgvvA~~t-~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV-~I~~ag~~nAa~lAa~Il~~~d- 139 (166)
T 3oow_A 63 VIIAGAGGAAHLPGMVAAKT-TLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATF-AIGMAGAKNAALFAASILQHTD- 139 (166)
T ss_dssp EEEEEECSSCCHHHHHHHTC-SSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEEC-CSTHHHHHHHHHHHHHHHGGGC-
T ss_pred EEEEECCcchhhHHHHHhcc-CCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEE-ecCCccchHHHHHHHHHHcCCC-
Confidence 38876664 35555544 78999999853221 1111 1222113332221 2221 12222221 23 456
Q ss_pred chHHHHHHHHHHHHHHHHHHhc
Q 012735 410 QGEEIRSRIFRLKEKANHSWKQ 431 (457)
Q Consensus 410 ~~~~~~~~a~~l~~~~~~~~~~ 431 (457)
+.++++.+..++++++.+.+
T Consensus 140 --~~l~~kl~~~r~~~~~~v~~ 159 (166)
T 3oow_A 140 --INIAKALAEFRAEQTRFVLE 159 (166)
T ss_dssp --HHHHHHHHHHHHHHHHHHHT
T ss_pred --HHHHHHHHHHHHHHHHHHHh
Confidence 78999999999988754443
No 217
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=35.97 E-value=23 Score=31.49 Aligned_cols=33 Identities=15% Similarity=0.296 Sum_probs=26.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.++|.|+..|..|+ .+|..|+++||+|+++..
T Consensus 14 ~~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~ 46 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQ 46 (302)
T ss_dssp CCCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred cCCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEEC
Confidence 346899998876665 688999999999998765
No 218
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=35.96 E-value=36 Score=25.40 Aligned_cols=37 Identities=16% Similarity=0.108 Sum_probs=26.4
Q ss_pred cEEEEEcCCCc-cCH-HHHHHHHHHHHHCC--CeEEEEeCC
Q 012735 7 RRLVLFPLPLQ-GHI-SPMLQLANILHSQG--FTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~-gH~-~p~l~la~~L~~~G--h~Vt~~~~~ 43 (457)
+|++|+-..+. ... +..+..|....++| |+|.++.-.
T Consensus 8 ~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G 48 (117)
T 2fb6_A 8 DKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWG 48 (117)
T ss_dssp SEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECS
T ss_pred CeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEEC
Confidence 66666555443 322 44778899999999 899999875
No 219
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=35.90 E-value=14 Score=32.73 Aligned_cols=56 Identities=11% Similarity=0.033 Sum_probs=36.7
Q ss_pred hhcCCCCCCcccccChhHHHHHHhh----CCcccccCccchhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHhcc
Q 012735 335 VLAHPAVGAFWTHNGWNSTLESICE----GIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVMVE 408 (457)
Q Consensus 335 lL~~~~~~~~I~hgG~~s~~eal~~----gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~~ 408 (457)
+-..+++ +|.-||=||+++++.. ++|++.++.. . +|.=. .+.++++.++++.+++.
T Consensus 60 ~~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~G-----------t-~gfla----~~~~~~~~~al~~i~~g 119 (292)
T 2an1_A 60 IGQQADL--AVVVGGDGNMLGAARTLARYDINVIGINRG-----------N-LGFLT----DLDPDNALQQLSDVLEG 119 (292)
T ss_dssp HHHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCSS-----------S-CCSSC----CBCTTSHHHHHHHHHTT
T ss_pred cccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEECC-----------C-cccCC----cCCHHHHHHHHHHHHcC
Confidence 3344677 9999999999999853 7898888732 1 12211 12355667777777654
No 220
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=35.88 E-value=55 Score=23.85 Aligned_cols=37 Identities=11% Similarity=0.009 Sum_probs=29.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.+||++++..|.|+-.-.-.+-+.+.++|.++.+-..
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~ 40 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAI 40 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEE
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 4789999988888876666777888888998776444
No 221
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=35.82 E-value=1.2e+02 Score=25.91 Aligned_cols=35 Identities=14% Similarity=0.061 Sum_probs=28.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+-|+++++.++.| --.++|++|++.|.+|.+....
T Consensus 10 ~GK~alVTGas~G---IG~aia~~la~~Ga~Vv~~~~~ 44 (242)
T 4b79_A 10 AGQQVLVTGGSSG---IGAAIAMQFAELGAEVVALGLD 44 (242)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3578888877764 4688999999999999887764
No 222
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=35.79 E-value=41 Score=32.41 Aligned_cols=35 Identities=23% Similarity=0.361 Sum_probs=27.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 4 RKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
++.+||.|+..++.| +-++|+.|.++|++|+..-.
T Consensus 20 ~~~~~v~viGiG~sG----~s~~A~~l~~~G~~V~~~D~ 54 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAG----MGGIAEVLANEGYQISGSDL 54 (494)
T ss_dssp --CCEEEEETTTSTT----HHHHHHHHHHTTCEEEEECS
T ss_pred ccCCEEEEEEEcHhh----HHHHHHHHHhCCCeEEEEEC
Confidence 456899999998866 45689999999999998654
No 223
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=35.77 E-value=71 Score=26.81 Aligned_cols=22 Identities=14% Similarity=0.116 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHCC-CeEEEEeCC
Q 012735 22 PMLQLANILHSQG-FTITIIHTS 43 (457)
Q Consensus 22 p~l~la~~L~~~G-h~Vt~~~~~ 43 (457)
--.+|+++|+++| |+|+.++..
T Consensus 35 iG~~l~~~L~~~G~~~V~~~~R~ 57 (236)
T 3qvo_A 35 IARHVINQLADKQTIKQTLFARQ 57 (236)
T ss_dssp HHHHHHHHHTTCTTEEEEEEESS
T ss_pred HHHHHHHHHHhCCCceEEEEEcC
Confidence 3468999999999 999998864
No 224
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=35.57 E-value=50 Score=28.36 Aligned_cols=39 Identities=18% Similarity=0.198 Sum_probs=26.1
Q ss_pred CCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 1 MDQRKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 1 ~~~~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|+-..++|.++++.++. .--.++|++|+++|++|.++..
T Consensus 1 M~~~~~~k~vlVTGas~---gIG~~~a~~l~~~G~~v~~~~~ 39 (264)
T 3i4f_A 1 MSLGRFVRHALITAGTK---GLGKQVTEKLLAKGYSVTVTYH 39 (264)
T ss_dssp -----CCCEEEETTTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCcccccCEEEEeCCCc---hhHHHHHHHHHHCCCEEEEEcC
Confidence 44334567777776653 2357899999999999998765
No 225
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=35.24 E-value=56 Score=29.23 Aligned_cols=34 Identities=12% Similarity=0.027 Sum_probs=24.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
++++|++....+ .--..|+++|+++||+|+.+..
T Consensus 4 ~~~~vlVTGatG----~iG~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 4 TKGTILVTGGAG----YIGSHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp SSCEEEEETTTS----HHHHHHHHHHHHTTCEEEEECC
T ss_pred CCcEEEEecCCc----HHHHHHHHHHHHCCCcEEEEec
Confidence 456776665333 2346789999999999998865
No 226
>2p90_A Hypothetical protein CGL1923; structural genomics, PSI-2, MCSG structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} SCOP: c.56.8.1
Probab=34.99 E-value=2.5e+02 Score=25.11 Aligned_cols=133 Identities=10% Similarity=0.019 Sum_probs=65.8
Q ss_pred CcEEEEEecccccCC-HHHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCC
Q 012735 262 KSVIYVSFGSIAAVS-EAEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPA 340 (457)
Q Consensus 262 ~~vv~vs~Gs~~~~~-~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~ 340 (457)
+++++++ |...... ..+...+++..++.+.+-++.+++-.... ...-|. .+........++..-.
T Consensus 102 ~~~lll~-gpeP~~~w~~f~~~vl~~a~~~gV~~vv~Lggl~~~~---phtrp~----------~V~~~at~~~l~~~~~ 167 (319)
T 2p90_A 102 KPFLMLS-GPEPDLRWGDFSNAVVDLVEKFGVENTICLYAAPMTV---PHTRPT----------VVTAHGNSTDRLKDQV 167 (319)
T ss_dssp CEEEEEE-EECCSBCHHHHHHHHHHHHHHTTCCEEEEEEEEEESC---CTTSCC----------CEEEEESSGGGCSSCC
T ss_pred CeEEEEE-CCCChHHHHHHHHHHHHHHHHcCCCEEEEEeCccCCC---CCCCCC----------CeEEEeCCHHHHhhhh
Confidence 4566665 6665544 56667799999999998888776532110 000011 1111111122221111
Q ss_pred C--CCcccccChhHHHH--HHhhCCccccc----Cccc---hhhHHHHHHHhhh--ccceecCC---CCCHHHHHHHHHH
Q 012735 341 V--GAFWTHNGWNSTLE--SICEGIPMICM----PCFT---DQKVNARYVSDVW--KVGLQLEN---GLKREEIEKTIRR 404 (457)
Q Consensus 341 ~--~~~I~hgG~~s~~e--al~~gvP~v~~----P~~~---DQ~~na~~v~~~l--G~g~~l~~---~~~~~~l~~ai~~ 404 (457)
. .-..--||..++++ +...|+|.+++ |+.. +.+.=|..+-+.+ =+|+.++. .-.++.+.+.|++
T Consensus 168 ~~~~~~~ipggi~glL~~~~~~~Gi~a~~l~~~vphYl~~~pdP~AA~~lL~~l~~l~gl~id~~~L~e~A~~~e~~i~~ 247 (319)
T 2p90_A 168 SLDTRMTVPGSASLMLEKLLKDKGKNVSGYTVHVPHYVSASPYPAATLKLLQSIADSADLNLPLLALERDAEKVHRQLME 247 (319)
T ss_dssp CCCCCEEECCCHHHHHHHHHHHTTCCEEEEEEEEEGGGTTSCCHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccCcEEeccHHHHHHHHHHHCCCCEEEEEEecCcccCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Confidence 1 00112356665554 45789998776 3222 3344443332111 13555554 3456667777777
Q ss_pred Hhcc
Q 012735 405 VMVE 408 (457)
Q Consensus 405 il~~ 408 (457)
+.+.
T Consensus 248 l~~~ 251 (319)
T 2p90_A 248 QTEE 251 (319)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7753
No 227
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=34.78 E-value=22 Score=31.67 Aligned_cols=33 Identities=12% Similarity=0.011 Sum_probs=26.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+++||.|+..|..| ..+|+.|+++||+|+++..
T Consensus 6 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 6 TDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEEC
Confidence 46789999766555 4789999999999998865
No 228
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=34.62 E-value=55 Score=28.17 Aligned_cols=34 Identities=15% Similarity=0.054 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.|+++++.++.| --.++|++|+++|++|.+...
T Consensus 10 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 43 (264)
T 3ucx_A 10 TDKVVVISGVGPA---LGTTLARRCAEQGADLVLAAR 43 (264)
T ss_dssp TTCEEEEESCCTT---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEEECCCcH---HHHHHHHHHHHCcCEEEEEeC
Confidence 3466677766543 457899999999999988765
No 229
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=34.57 E-value=66 Score=26.26 Aligned_cols=33 Identities=9% Similarity=0.287 Sum_probs=25.3
Q ss_pred hhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHhcc
Q 012735 371 DQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVMVE 408 (457)
Q Consensus 371 DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~~ 408 (457)
+..+.+..-++ .|+|+.+ |+|+|.++|.+.++.
T Consensus 100 ~~id~~~Fe~~-cGVGV~V----T~EqI~~~V~~~i~~ 132 (187)
T 3tl4_X 100 EASTKMGMNEN-SGVGIEI----TEDQVRNYVMQYIQE 132 (187)
T ss_dssp GGCCHHHHHHT-TTTTCCC----CHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHH-CCCCeEe----CHHHHHHHHHHHHHH
Confidence 33455666667 4999876 899999999999965
No 230
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=34.52 E-value=27 Score=26.26 Aligned_cols=38 Identities=24% Similarity=0.177 Sum_probs=24.6
Q ss_pred HHHHHHhhccCCCCeeEEEeCCCcc--hHHHHHhH---cCCCeEEEe
Q 012735 91 DCLAKLLADVEEEPIACLISDAMLP--FTQAVADS---LKLPRIVLR 132 (457)
Q Consensus 91 ~~l~~l~~~~~~~~pDlvi~D~~~~--~~~~~A~~---l~iP~v~~~ 132 (457)
+.++.+.+. +||+||.|..-+ -|..+++. .++|+|.++
T Consensus 44 eAl~~~~~~----~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 44 EALDIARKG----QFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHHHHHHC----CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHHHHHHhC----CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 445555443 899999998652 34555554 478877654
No 231
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=34.41 E-value=25 Score=31.84 Aligned_cols=33 Identities=18% Similarity=0.153 Sum_probs=27.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.+||+++..|..| ..+|..|++.||+|+++...
T Consensus 3 ~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVG-----GYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEECh
Confidence 4789999877655 46789999999999999863
No 232
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=34.40 E-value=49 Score=28.67 Aligned_cols=35 Identities=11% Similarity=0.214 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+.|+++++.++.| --.++|++|+++|++|.++...
T Consensus 10 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 44 (271)
T 3tzq_B 10 ENKVAIITGACGG---IGLETSRVLARAGARVVLADLP 44 (271)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEcCC
Confidence 4566677766542 4578999999999999887653
No 233
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=34.16 E-value=48 Score=29.18 Aligned_cols=39 Identities=23% Similarity=0.370 Sum_probs=29.3
Q ss_pred CCCcEEEEEcCCCccCHHHH--HHHHHHHHHCC-CeEEEEeCC
Q 012735 4 RKGRRLVLFPLPLQGHISPM--LQLANILHSQG-FTITIIHTS 43 (457)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~--l~la~~L~~~G-h~Vt~~~~~ 43 (457)
+++.|||+++. ..+|-.+. -.|++.|.+.| .+|++....
T Consensus 2 ~~~~kvLiv~G-~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLITG-QNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEES-CCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCceEEEEEcC-CCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 46889999944 34786443 57788888888 999998763
No 234
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=34.14 E-value=58 Score=26.68 Aligned_cols=35 Identities=20% Similarity=0.385 Sum_probs=27.1
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 9 LVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 9 il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
|+++..+...+-.....+++.|++.|+.|.++.-.
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G 144 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIG 144 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEES
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeC
Confidence 45555555566777889999999999999987754
No 235
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=34.08 E-value=72 Score=24.58 Aligned_cols=38 Identities=18% Similarity=0.338 Sum_probs=26.0
Q ss_pred CcEEEE-EcCCCccCHHH--HHHHHHHHHHCCCeE-EEEeCC
Q 012735 6 GRRLVL-FPLPLQGHISP--MLQLANILHSQGFTI-TIIHTS 43 (457)
Q Consensus 6 ~~~il~-~~~~~~gH~~p--~l~la~~L~~~Gh~V-t~~~~~ 43 (457)
.||++| +..+-+|+-.. .+.+|+++.+.||+| .++-..
T Consensus 12 ~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~ 53 (140)
T 2d1p_A 12 SMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYR 53 (140)
T ss_dssp CCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred ceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEec
Confidence 355544 44455565444 577799999999999 777664
No 236
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=34.01 E-value=53 Score=29.52 Aligned_cols=35 Identities=14% Similarity=0.197 Sum_probs=27.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 4 RKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.++|||+|+..+.++ ++..++|.+.||+|..+.+.
T Consensus 2 ~~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~ 36 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQ 36 (317)
T ss_dssp CTTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECC
T ss_pred CCceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeC
Confidence 467899999988754 34567888899999887775
No 237
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=33.97 E-value=32 Score=31.18 Aligned_cols=81 Identities=10% Similarity=-0.058 Sum_probs=46.8
Q ss_pred EEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCCCCC
Q 012735 264 VIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVGA 343 (457)
Q Consensus 264 vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~ 343 (457)
.|+++-.+-.....+.+..+...|+..+..+.+..... +....+ + -+.......++
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~-----------~~~a~~-------~----~~~~~~~~~d~-- 83 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEK-----------IGDATL-------E----AERAMHENYDV-- 83 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCS-----------TTHHHH-------H----HHHHTTTTCSE--
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecC-----------cchHHH-------H----HHHHhhcCCCE--
Confidence 34444433322234566778888888776655544322 111110 0 01112223455
Q ss_pred cccccChhHHHHHHh------hCCcccccCc
Q 012735 344 FWTHNGWNSTLESIC------EGIPMICMPC 368 (457)
Q Consensus 344 ~I~hgG~~s~~eal~------~gvP~v~~P~ 368 (457)
+|.-||=||+.|++. .++|+.++|.
T Consensus 84 vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 84 LIAAGGDGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp EEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred EEEEcCchHHHHHHHHHHhCCCCCcEEEecC
Confidence 999999999999864 4689999997
No 238
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=33.88 E-value=67 Score=29.20 Aligned_cols=34 Identities=3% Similarity=0.094 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHC-CCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQ-GFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~-Gh~Vt~~~~~ 43 (457)
+++|+++...+ . --..|+++|.++ ||+|+.++..
T Consensus 24 ~~~vlVtGatG--~--iG~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 24 AKKVLILGVNG--F--IGHHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp CCEEEEESCSS--H--HHHHHHHHHHHHSSCEEEEEESC
T ss_pred CCEEEEECCCC--h--HHHHHHHHHHhCCCCEEEEEeCC
Confidence 46777765433 2 346789999998 9999999864
No 239
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=33.74 E-value=44 Score=29.45 Aligned_cols=33 Identities=21% Similarity=0.256 Sum_probs=25.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+++||.|+..|..|. .+|+.|.+.||+|+++..
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 468999998776664 468889999999987654
No 240
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=33.73 E-value=34 Score=30.33 Aligned_cols=33 Identities=15% Similarity=0.330 Sum_probs=26.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.+||.|+..+..|. .+|+.|++.||+|+++..
T Consensus 2 ~m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~ 34 (302)
T 2h78_A 2 HMKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (302)
T ss_dssp -CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 357899998777664 778999999999998855
No 241
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=33.58 E-value=35 Score=29.51 Aligned_cols=38 Identities=16% Similarity=0.256 Sum_probs=29.0
Q ss_pred CCcEEEEEc--CCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFP--LPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~--~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++++++.+. -|+-|=..-...||..|+ +|++|.++-..
T Consensus 25 ~~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D 64 (267)
T 3k9g_A 25 KKPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMD 64 (267)
T ss_dssp -CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEEC
T ss_pred CCCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECC
Confidence 445554443 445699999999999999 99999998765
No 242
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=33.47 E-value=54 Score=31.71 Aligned_cols=34 Identities=9% Similarity=-0.042 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+|+|+++...+ .--..|++.|.++||+|+.++-.
T Consensus 147 ~m~VLVTGatG----~IG~~l~~~L~~~G~~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAITGSRG----LVGRALTAQLQTGGHEVIQLVRK 180 (516)
T ss_dssp CCEEEEESTTS----HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCC----HHHHHHHHHHHHCCCEEEEEECC
Confidence 57887776444 23357899999999999999864
No 243
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=33.47 E-value=1.2e+02 Score=22.98 Aligned_cols=54 Identities=7% Similarity=0.159 Sum_probs=36.6
Q ss_pred HHHHHHh-----hCCcccccCccchhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHhc
Q 012735 352 STLESIC-----EGIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVMV 407 (457)
Q Consensus 352 s~~eal~-----~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~ 407 (457)
.+++.+. ..+|+|++--..+. ....+..+ .|+---+.+.+++++|.++|++++.
T Consensus 74 el~~~ir~~~~~~~ipvI~lTa~~~~-~~~~~~~~-~Ga~~yl~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 74 DLLKNIRADEELKHLPVLMITAEAKR-EQIIEAAQ-AGVNGYIVKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp HHHHHHHHSTTTTTCCEEEEESSCCH-HHHHHHHH-TTCCEEEESSCCHHHHHHHHHHHCC
T ss_pred HHHHHHHhCCCCCCCeEEEEECCCCH-HHHHHHHH-CCCCEEEECCCCHHHHHHHHHHHHh
Confidence 4455554 45787776554444 44555555 4876667667999999999999874
No 244
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=33.47 E-value=44 Score=28.98 Aligned_cols=35 Identities=11% Similarity=0.162 Sum_probs=25.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+.|+++++.++. .--.++|++|+++|++|.++...
T Consensus 15 ~~k~vlVTGas~---gIG~aia~~l~~~G~~V~~~~r~ 49 (266)
T 3p19_A 15 MKKLVVITGASS---GIGEAIARRFSEEGHPLLLLARR 49 (266)
T ss_dssp CCCEEEEESTTS---HHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEEECCCC---HHHHHHHHHHHHCCCEEEEEECC
Confidence 345666666653 24568999999999999988753
No 245
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=33.45 E-value=53 Score=27.96 Aligned_cols=34 Identities=15% Similarity=0.105 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.|+++++.++. .--.++|++|+++|++|.++..
T Consensus 6 ~~k~vlVTGas~---gIG~~ia~~l~~~G~~V~~~~r 39 (249)
T 2ew8_A 6 KDKLAVITGGAN---GIGRAIAERFAVEGADIAIADL 39 (249)
T ss_dssp TTCEEEEETTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCc---HHHHHHHHHHHHCCCEEEEEcC
Confidence 345556665543 3457899999999999998765
No 246
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=33.42 E-value=1.4e+02 Score=26.25 Aligned_cols=107 Identities=7% Similarity=0.046 Sum_probs=57.4
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCC-CCCCCCCCCCCeeEEecCCCCCCCCCCccCHHHHHH
Q 012735 3 QRKGRRLVLFPLPLQGHISPMLQLANILHSQ--GFTITIIHTS-FNSPNPSSHPHLTFHFIQENLSASEASTDDLVAFVS 79 (457)
Q Consensus 3 ~~~~~~il~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~~-~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (457)
..+++||+++.++. || -+.+|..+-.+- ..+|..+.+. ..........|+.+..+|.... +-
T Consensus 87 ~~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~gIp~~~~~~~~~-------~r----- 151 (286)
T 3n0v_A 87 PNHRPKVVIMVSKA-DH--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWHKIPYYHFALDPK-------DK----- 151 (286)
T ss_dssp TTCCCEEEEEESSC-CH--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHTTCCEEECCCBTT-------BH-----
T ss_pred CCCCcEEEEEEeCC-CC--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHcCCCEEEeCCCcC-------CH-----
Confidence 34578998888777 54 344555554332 4677776653 2211122235787777764210 00
Q ss_pred HHHHhcchhHHHHHHHHhhccCCCCeeEEEeCCCc-chHHHHHhHcCCCeEEEecc
Q 012735 80 LLNTKCLVPFRDCLAKLLADVEEEPIACLISDAML-PFTQAVADSLKLPRIVLRTG 134 (457)
Q Consensus 80 ~~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~-~~~~~~A~~l~iP~v~~~~~ 134 (457)
......+.+.++++ +||+||.-.+. .-...+-+.+.-.++-++++
T Consensus 152 ---~~~~~~~~~~l~~~-------~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 197 (286)
T 3n0v_A 152 ---PGQERKVLQVIEET-------GAELVILARYMQVLSPELCRRLDGWAINIHHS 197 (286)
T ss_dssp ---HHHHHHHHHHHHHH-------TCSEEEESSCCSCCCHHHHHHTTTSEEEEEEC
T ss_pred ---HHHHHHHHHHHHhc-------CCCEEEecccccccCHHHHhhhcCCeEEeccc
Confidence 01111222233333 89999987654 44445555566677777665
No 247
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=33.40 E-value=48 Score=28.76 Aligned_cols=33 Identities=24% Similarity=0.244 Sum_probs=25.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++||+++. + |.+ -..|+++|.++||+|+.++..
T Consensus 5 ~~~ilVtG--a-G~i--G~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 5 TGTLLSFG--H-GYT--ARVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CCEEEEET--C-CHH--HHHHHHHHGGGTCEEEEEESC
T ss_pred cCcEEEEC--C-cHH--HHHHHHHHHHCCCEEEEEEcC
Confidence 46788775 3 533 457899999999999999864
No 248
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=33.32 E-value=55 Score=28.58 Aligned_cols=34 Identities=15% Similarity=0.129 Sum_probs=26.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.|+++++.++.| --.++|++|+++|++|.++..
T Consensus 10 ~~k~~lVTGas~g---IG~aia~~la~~G~~V~~~~~ 43 (286)
T 3uve_A 10 EGKVAFVTGAARG---QGRSHAVRLAQEGADIIAVDI 43 (286)
T ss_dssp TTCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEec
Confidence 4567777776643 467899999999999988765
No 249
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=33.26 E-value=70 Score=26.99 Aligned_cols=31 Identities=10% Similarity=0.064 Sum_probs=22.7
Q ss_pred CeeEEEeCCCcch-------HHHHHhHcCCCeEEEecc
Q 012735 104 PIACLISDAMLPF-------TQAVADSLKLPRIVLRTG 134 (457)
Q Consensus 104 ~pDlvi~D~~~~~-------~~~~A~~l~iP~v~~~~~ 134 (457)
+||+|++|..-.. +..+.-.+++|+|.+.=.
T Consensus 103 ~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK~ 140 (225)
T 2w36_A 103 KPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKS 140 (225)
T ss_dssp CCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEESS
T ss_pred CCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEec
Confidence 8999999986432 344566679999997643
No 250
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=33.12 E-value=32 Score=30.29 Aligned_cols=32 Identities=19% Similarity=0.297 Sum_probs=24.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIH 41 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~ 41 (457)
+++||.|+..|..|. .+|+.|.+.||+|+++.
T Consensus 2 ~~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp --CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 457999998776664 57888999999998664
No 251
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=33.09 E-value=67 Score=23.06 Aligned_cols=34 Identities=9% Similarity=0.152 Sum_probs=24.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCC-CeEEEEeCC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQG-FTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~G-h~Vt~~~~~ 43 (457)
..++|+++..+. --..+++.|.++| |+|+++...
T Consensus 4 ~~~~v~I~G~G~-----iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 4 MRWNICVVGAGK-----IGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp TCEEEEEECCSH-----HHHHHHHHHHHCSSEEEEEEESC
T ss_pred CcCeEEEECCCH-----HHHHHHHHHHhCCCceEEEEeCC
Confidence 356788875532 2357899999999 999887763
No 252
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=32.99 E-value=60 Score=28.64 Aligned_cols=33 Identities=12% Similarity=-0.015 Sum_probs=24.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++|+++...+ .--..|+++|.++||+|+.++..
T Consensus 3 ~~vlVtGatG----~iG~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 3 LKIAVTGGTG----FLGQYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp CEEEEETTTS----HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCc----HHHHHHHHHHHhCCCEEEEEeCC
Confidence 5777765444 33457899999999999999874
No 253
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=32.90 E-value=54 Score=28.27 Aligned_cols=34 Identities=12% Similarity=0.126 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.|+++++.++.| --.++|+.|+++|++|.++..
T Consensus 7 ~~k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 7 SEAVAVVTGGSSG---IGLATVELLLEAGAAVAFCAR 40 (265)
T ss_dssp TTCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 3466677766543 467899999999999988765
No 254
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=32.84 E-value=24 Score=31.64 Aligned_cols=33 Identities=12% Similarity=0.134 Sum_probs=25.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCC-eEEEEeC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGF-TITIIHT 42 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh-~Vt~~~~ 42 (457)
+.+||.|+..|..| ..+|+.|++.|| +|+++..
T Consensus 23 ~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 23 NAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcC
Confidence 46789999776655 588999999999 9988766
No 255
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=32.78 E-value=40 Score=28.84 Aligned_cols=39 Identities=21% Similarity=0.258 Sum_probs=25.7
Q ss_pred CCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 1 MDQRKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 1 ~~~~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|+-+-+.|+++++.++. .--.++|+.|+++|++|.++..
T Consensus 1 M~~~~~~k~~lVTGas~---GIG~aia~~l~~~G~~V~~~~r 39 (250)
T 3nyw_A 1 MSLEKQKGLAIITGASQ---GIGAVIAAGLATDGYRVVLIAR 39 (250)
T ss_dssp ----CCCCEEEEESTTS---HHHHHHHHHHHHHTCEEEEEES
T ss_pred CcccCCCCEEEEECCCc---HHHHHHHHHHHHCCCEEEEEEC
Confidence 44334456666666553 2457899999999999988765
No 256
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=32.78 E-value=64 Score=26.52 Aligned_cols=38 Identities=13% Similarity=0.123 Sum_probs=29.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+..++++..+..|...-+..+++.|+++|+.|..+-..
T Consensus 27 ~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 64 (236)
T 1zi8_A 27 PAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLY 64 (236)
T ss_dssp SEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGG
T ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEecccc
Confidence 34466666666677778899999999999998877653
No 257
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=32.77 E-value=57 Score=29.71 Aligned_cols=40 Identities=18% Similarity=0.279 Sum_probs=32.6
Q ss_pred CCcEEEEEc-CCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 012735 5 KGRRLVLFP-LPLQGHISPMLQLANILHSQGFTITIIHTSF 44 (457)
Q Consensus 5 ~~~~il~~~-~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 44 (457)
+.++|+|++ -|+-|-..-..++|..|+++|++|.++....
T Consensus 24 ~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 64 (349)
T 3ug7_A 24 DGTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP 64 (349)
T ss_dssp CSCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCT
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 345555555 4566999999999999999999999999864
No 258
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=32.76 E-value=59 Score=28.67 Aligned_cols=34 Identities=18% Similarity=0.160 Sum_probs=26.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.|+++++.++.| --.++|++|+++|++|.++..
T Consensus 27 ~gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 60 (299)
T 3t7c_A 27 EGKVAFITGAARG---QGRSHAITLAREGADIIAIDV 60 (299)
T ss_dssp TTCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEec
Confidence 4567777776643 467899999999999988765
No 259
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=32.65 E-value=97 Score=22.89 Aligned_cols=48 Identities=8% Similarity=0.097 Sum_probs=32.4
Q ss_pred CCcccccCccchhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHhcc
Q 012735 360 GIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVMVE 408 (457)
Q Consensus 360 gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~~ 408 (457)
.+|+|++--..+.........+ .|+---+.+.++.++|..+|++++..
T Consensus 80 ~~~ii~~s~~~~~~~~~~~~~~-~g~~~~l~kP~~~~~l~~~i~~~l~~ 127 (140)
T 3grc_A 80 DLAIVVVSANAREGELEFNSQP-LAVSTWLEKPIDENLLILSLHRAIDN 127 (140)
T ss_dssp TCEEEEECTTHHHHHHHHCCTT-TCCCEEECSSCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCChHHHHHHhhh-cCCCEEEeCCCCHHHHHHHHHHHHHh
Confidence 6777776655544333323444 36655566678999999999999976
No 260
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=32.64 E-value=65 Score=24.68 Aligned_cols=36 Identities=11% Similarity=0.109 Sum_probs=25.4
Q ss_pred EEEE-EcCCCccCHHH--HHHHHHHHHHCCCeEEEEeCC
Q 012735 8 RLVL-FPLPLQGHISP--MLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 8 ~il~-~~~~~~gH~~p--~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
|++| +..+-+|+... .+.+|.++.+.||+|.++-..
T Consensus 7 k~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~ 45 (136)
T 2hy5_B 7 KFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLD 45 (136)
T ss_dssp EEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECG
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEh
Confidence 4544 44445566554 577799999999999998765
No 261
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=32.58 E-value=70 Score=27.38 Aligned_cols=38 Identities=13% Similarity=0.381 Sum_probs=27.5
Q ss_pred CcEEEEEcCCCcc-----------CHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQG-----------HISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~g-----------H~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++||+++.....+ ...=++.....|.++|++|+++++.
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4578877765322 2244677788999999999999985
No 262
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=32.19 E-value=28 Score=29.81 Aligned_cols=33 Identities=21% Similarity=0.303 Sum_probs=26.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.++|.|+..|..| .++|+.|++.||+|++....
T Consensus 19 ~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 19 GMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred CCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 5789999666544 56899999999999988653
No 263
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=32.15 E-value=53 Score=28.60 Aligned_cols=39 Identities=21% Similarity=0.185 Sum_probs=31.4
Q ss_pred CCcEEEEEcCC---CccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFPLP---LQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~---~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
..+|.+|++.+ +-|-=.-...|+..|++||+.||..--.
T Consensus 21 ~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~D 62 (295)
T 2vo1_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKID 62 (295)
T ss_dssp CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecc
Confidence 35788898866 3466677889999999999999997643
No 264
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=32.08 E-value=31 Score=30.49 Aligned_cols=32 Identities=9% Similarity=-0.012 Sum_probs=26.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.+|+++..+..| +..|..|+++|++|+++-..
T Consensus 16 ~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~ 47 (323)
T 3f8d_A 16 FDVIIVGLGPAA-----YGAALYSARYMLKTLVIGET 47 (323)
T ss_dssp EEEEEECCSHHH-----HHHHHHHHHTTCCEEEEESS
T ss_pred cCEEEECccHHH-----HHHHHHHHHCCCcEEEEecc
Confidence 578888777645 78899999999999999763
No 265
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=31.99 E-value=1e+02 Score=23.24 Aligned_cols=48 Identities=10% Similarity=-0.017 Sum_probs=30.6
Q ss_pred hCCcccccCccchhhHHHHHHHhhhc-cceecCCCCCHHHHHHHHHHHhcc
Q 012735 359 EGIPMICMPCFTDQKVNARYVSDVWK-VGLQLENGLKREEIEKTIRRVMVE 408 (457)
Q Consensus 359 ~gvP~v~~P~~~DQ~~na~~v~~~lG-~g~~l~~~~~~~~l~~ai~~il~~ 408 (457)
..+|+|++--..|.... .+..+ .| +--.+.+.++.++|.++|++++..
T Consensus 75 ~~~~ii~~s~~~~~~~~-~~~~~-~g~~~~~l~KP~~~~~L~~~i~~~l~~ 123 (151)
T 3kcn_A 75 PNSVYLMLTGNQDLTTA-MEAVN-EGQVFRFLNKPCQMSDIKAAINAGIKQ 123 (151)
T ss_dssp SSCEEEEEECGGGHHHH-HHHHH-HTCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCHHHH-HHHHH-cCCeeEEEcCCCCHHHHHHHHHHHHHH
Confidence 35666666544444333 33334 26 533455568999999999999976
No 266
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=31.99 E-value=55 Score=29.26 Aligned_cols=34 Identities=21% Similarity=0.158 Sum_probs=24.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.|+|++.... |. --..|+++|+++||+|+.+...
T Consensus 20 ~~~vlVTGas--G~--iG~~l~~~L~~~g~~V~~~~r~ 53 (330)
T 2pzm_A 20 HMRILITGGA--GC--LGSNLIEHWLPQGHEILVIDNF 53 (330)
T ss_dssp CCEEEEETTT--SH--HHHHHHHHHGGGTCEEEEEECC
T ss_pred CCEEEEECCC--CH--HHHHHHHHHHHCCCEEEEEECC
Confidence 4666665433 32 3467899999999999998763
No 267
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=31.72 E-value=64 Score=27.55 Aligned_cols=34 Identities=15% Similarity=0.016 Sum_probs=24.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.|.++++.++. .--.++++.|+++|++|.++..
T Consensus 6 ~~k~vlITGasg---giG~~la~~l~~~G~~V~~~~r 39 (264)
T 2pd6_A 6 RSALALVTGAGS---GIGRAVSVRLAGEGATVAACDL 39 (264)
T ss_dssp TTCEEEEETTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCC---hHHHHHHHHHHHCCCEEEEEeC
Confidence 334555555443 2457899999999999998865
No 268
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=31.60 E-value=33 Score=31.16 Aligned_cols=32 Identities=16% Similarity=0.196 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
++||+++..|..| ..+|..|.+.||+|+++..
T Consensus 4 ~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 4 SKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 4799999776555 4578899999999998865
No 269
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=31.59 E-value=81 Score=23.35 Aligned_cols=35 Identities=9% Similarity=0.062 Sum_probs=25.5
Q ss_pred EEEEcCCCccCH--HHHHHHHHHHHHCCCeEEEEeCC
Q 012735 9 LVLFPLPLQGHI--SPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 9 il~~~~~~~gH~--~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++++..+-+|+. .-.+.+|.++.+.||+|.++-..
T Consensus 5 ~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~ 41 (119)
T 2d1p_B 5 AFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIA 41 (119)
T ss_dssp EEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECG
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEeh
Confidence 344445555665 55678899999999999998765
No 270
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=31.58 E-value=75 Score=27.48 Aligned_cols=34 Identities=12% Similarity=0.034 Sum_probs=25.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.|+++++.++. .--.++|++|+++|++|.++..
T Consensus 27 ~~k~~lVTGas~---GIG~aia~~la~~G~~V~~~~r 60 (270)
T 3ftp_A 27 DKQVAIVTGASR---GIGRAIALELARRGAMVIGTAT 60 (270)
T ss_dssp TTCEEEETTCSS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCC---HHHHHHHHHHHHCCCEEEEEeC
Confidence 456777776654 3457899999999999987765
No 271
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=31.58 E-value=69 Score=27.61 Aligned_cols=34 Identities=18% Similarity=0.112 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.|+++++.++.| --.++|++|+++|++|.+...
T Consensus 9 ~~k~~lVTGas~g---IG~aia~~l~~~G~~V~~~~r 42 (267)
T 3t4x_A 9 KGKTALVTGSTAG---IGKAIATSLVAEGANVLINGR 42 (267)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3466777766542 457899999999999988765
No 272
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=31.45 E-value=58 Score=30.88 Aligned_cols=33 Identities=18% Similarity=0.341 Sum_probs=26.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.+||+|+..+..| .++|+.|+++||+|+..-.
T Consensus 8 ~~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 8 ENKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TTCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 46799999987654 3469999999999999765
No 273
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=31.41 E-value=52 Score=28.95 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=26.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+.|+++++.++.| --.++|++|+++|++|.++...
T Consensus 11 ~~k~vlITGas~G---IG~~~a~~L~~~G~~V~~~~r~ 45 (311)
T 3o26_A 11 KRRCAVVTGGNKG---IGFEICKQLSSNGIMVVLTCRD 45 (311)
T ss_dssp -CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3467777766643 4568999999999999888753
No 274
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=31.39 E-value=72 Score=27.34 Aligned_cols=33 Identities=6% Similarity=0.013 Sum_probs=23.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.|.++++.++. .--.++|++|+++||+|.++..
T Consensus 7 ~k~vlVTGas~---gIG~~ia~~l~~~G~~V~~~~r 39 (260)
T 1nff_A 7 GKVALVSGGAR---GMGASHVRAMVAEGAKVVFGDI 39 (260)
T ss_dssp TCEEEEETTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCC---HHHHHHHHHHHHCCCEEEEEeC
Confidence 34555554443 3456899999999999998765
No 275
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=31.37 E-value=38 Score=30.10 Aligned_cols=35 Identities=11% Similarity=0.064 Sum_probs=24.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++++|+++. +.|.+ -..|+++|.++||+|+.++..
T Consensus 3 ~~~~ilVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 37 (321)
T 3c1o_A 3 HMEKIIIYG--GTGYI--GKFMVRASLSFSHPTFIYARP 37 (321)
T ss_dssp -CCCEEEET--TTSTT--HHHHHHHHHHTTCCEEEEECC
T ss_pred cccEEEEEc--CCchh--HHHHHHHHHhCCCcEEEEECC
Confidence 345676664 33443 346889999999999998864
No 276
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=31.34 E-value=45 Score=28.73 Aligned_cols=37 Identities=22% Similarity=0.317 Sum_probs=31.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+.|.|..-|+-|-..-...||..|+++|++|.++-..
T Consensus 2 ~vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 2 RQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred cEEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 3566666677799999999999999999999998764
No 277
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=31.16 E-value=61 Score=28.94 Aligned_cols=33 Identities=18% Similarity=0.314 Sum_probs=23.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++|++.... |. --..|+++|+++||+|+.+...
T Consensus 4 ~~vlVtGat--G~--iG~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 4 KRALITGIR--GQ--DGAYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp CEEEEETTT--SH--HHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCC--Ch--HHHHHHHHHHHCCCEEEEEECC
Confidence 566665433 32 3467899999999999988753
No 278
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=31.16 E-value=1.4e+02 Score=22.12 Aligned_cols=39 Identities=18% Similarity=0.085 Sum_probs=25.5
Q ss_pred CCcEEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEEC
Q 012735 261 PKSVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVR 299 (457)
Q Consensus 261 ~~~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~ 299 (457)
++.+|+++.||........+..+.+.++.....+.+.+-
T Consensus 5 ~~alllv~HGS~~~~~~~~~~~l~~~l~~~~~~V~~a~l 43 (126)
T 3lyh_A 5 PHQIILLAHGSSDARWCETFEKLAEPTVESIENAAIAYM 43 (126)
T ss_dssp CEEEEEEECCCSCHHHHHHHHHHHHHHHHHSTTCEEEES
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 357999999997543345566777777654445555543
No 279
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=31.07 E-value=66 Score=28.73 Aligned_cols=32 Identities=9% Similarity=0.084 Sum_probs=22.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
++|++....+ .--..|+++|.++||+|+.++.
T Consensus 10 ~~vlVTGatG----fIG~~l~~~Ll~~G~~V~~~~r 41 (338)
T 2rh8_A 10 KTACVVGGTG----FVASLLVKLLLQKGYAVNTTVR 41 (338)
T ss_dssp CEEEEECTTS----HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCch----HHHHHHHHHHHHCCCEEEEEEc
Confidence 5666554333 2335789999999999997664
No 280
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=31.03 E-value=56 Score=30.42 Aligned_cols=37 Identities=22% Similarity=0.247 Sum_probs=28.3
Q ss_pred CCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCC-CeEEEEeC
Q 012735 1 MDQRKGRRLVLFPLPLQGHISPMLQLANILHSQG-FTITIIHT 42 (457)
Q Consensus 1 ~~~~~~~~il~~~~~~~gH~~p~l~la~~L~~~G-h~Vt~~~~ 42 (457)
|+..++++|+++..|. .-+..|..|+++| ++|+++=.
T Consensus 1 M~~~~~~~v~IIGaG~-----aGl~aA~~L~~~g~~~v~v~E~ 38 (424)
T 2b9w_A 1 MSISKDSRIAIIGAGP-----AGLAAGMYLEQAGFHDYTILER 38 (424)
T ss_dssp -CCCTTCCEEEECCSH-----HHHHHHHHHHHTTCCCEEEECS
T ss_pred CCCCCCCCEEEECcCH-----HHHHHHHHHHhCCCCcEEEEEC
Confidence 6555677888887663 4578899999999 99999854
No 281
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=31.02 E-value=72 Score=27.75 Aligned_cols=39 Identities=15% Similarity=0.244 Sum_probs=30.6
Q ss_pred CCcEEEEEc--CCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFP--LPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~--~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+++++++++ -++-|-..-...||..|++.|..|.++-..
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 344554444 356799999999999999999999998765
No 282
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=30.98 E-value=2.3e+02 Score=23.51 Aligned_cols=104 Identities=6% Similarity=0.016 Sum_probs=0.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCCCCCCCCCC---CCeeEEecCCCCCCCCCCccCHHHHHHHH
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQ--GFTITIIHTSFNSPNPSSH---PHLTFHFIQENLSASEASTDDLVAFVSLL 81 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~~~~~~~~~~~---~g~~~~~i~~~~~~~~~~~~~~~~~~~~~ 81 (457)
+||+++.++..+ -+.+|.+++.+. +|+|..+.+.......... .|+.+..++..-...
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~~~~~~~-------------- 63 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDS-------------- 63 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCGGGCSS--------------
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeCcccccc--------------
Q ss_pred HHhcchhHHHHHHHHhhccCCCCeeEEEeCCCc-chHHHHHhHcCCCeEEEecc
Q 012735 82 NTKCLVPFRDCLAKLLADVEEEPIACLISDAML-PFTQAVADSLKLPRIVLRTG 134 (457)
Q Consensus 82 ~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~-~~~~~~A~~l~iP~v~~~~~ 134 (457)
...+.+.+.+.++.. +||+||+-.+. .-...+-+...-.++-++++
T Consensus 64 ----r~~~~~~~~~~l~~~---~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 64 ----REAYDRELIHEIDMY---APDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp ----HHHHHHHHHHHHGGG---CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ----hhhccHHHHHHHHhc---CCCEEEEeChhhhCCHHHHhhccCCEEEEccC
No 283
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=30.81 E-value=2.2e+02 Score=25.05 Aligned_cols=106 Identities=9% Similarity=0.081 Sum_probs=56.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCCC--CCCCCCCCCCeeEEecCCCCCCCCCCccCHHHHHH
Q 012735 4 RKGRRLVLFPLPLQGHISPMLQLANILHSQ--GFTITIIHTSF--NSPNPSSHPHLTFHFIQENLSASEASTDDLVAFVS 79 (457)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~~~--~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (457)
.+++||+++.++. || -+.+|..+-.+- ..+|..+.+.. .........|+.+..+|.... +
T Consensus 87 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~~~gIp~~~~~~~~~-------~------ 150 (288)
T 3obi_A 87 ETRRKVMLLVSQS-DH--CLADILYRWRVGDLHMIPTAIVSNHPRETFSGFDFGDIPFYHFPVNKD-------T------ 150 (288)
T ss_dssp TSCEEEEEEECSC-CH--HHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTTTTTCCEEECCCCTT-------T------
T ss_pred CCCcEEEEEEcCC-CC--CHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHHHcCCCEEEeCCCcc-------c------
Confidence 4578898888776 54 334555544332 24666655422 222333346888888764210 0
Q ss_pred HHHHhcchhHHHHHHHHhhccCCCCeeEEEeCCCc-chHHHHHhHcCCCeEEEecc
Q 012735 80 LLNTKCLVPFRDCLAKLLADVEEEPIACLISDAML-PFTQAVADSLKLPRIVLRTG 134 (457)
Q Consensus 80 ~~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~-~~~~~~A~~l~iP~v~~~~~ 134 (457)
.......+.+.++++ ++|+||.-.+. .-...+-+.+.-.++-++++
T Consensus 151 --r~~~~~~~~~~l~~~-------~~Dlivlagy~~il~~~~l~~~~~~~iNiHpS 197 (288)
T 3obi_A 151 --RRQQEAAITALIAQT-------HTDLVVLARYMQILSDEMSARLAGRCINIHHS 197 (288)
T ss_dssp --HHHHHHHHHHHHHHH-------TCCEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred --HHHHHHHHHHHHHhc-------CCCEEEhhhhhhhCCHHHHhhhcCCeEEeCcc
Confidence 011111222233333 89999987654 44445555566667777665
No 284
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=30.76 E-value=42 Score=28.18 Aligned_cols=33 Identities=15% Similarity=0.167 Sum_probs=23.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
|+++++.++. .--.++|++|+++|++|.++...
T Consensus 2 k~vlVTGas~---gIG~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 2 SLIVITGASS---GLGAELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp -CEEEESTTS---HHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEecCCc---hHHHHHHHHHHHCCCEEEEEeCC
Confidence 4555655553 34578999999999999887753
No 285
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=30.61 E-value=1.1e+02 Score=22.53 Aligned_cols=49 Identities=14% Similarity=0.120 Sum_probs=29.7
Q ss_pred hCCcccccCccchhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHhcc
Q 012735 359 EGIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVMVE 408 (457)
Q Consensus 359 ~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~~ 408 (457)
..+|+|++--..|.......+... |+---+.+.++.++|..+|++++..
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~~-ga~~~l~KP~~~~~L~~~i~~~~~~ 119 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAINDA-GIHQFLTKPWHPEQLLSSARNAARM 119 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHHT-TCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHhh-chhhhccCCCCHHHHHHHHHHHHHH
Confidence 356766664444433333334431 4433444468999999999999865
No 286
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=30.61 E-value=70 Score=28.48 Aligned_cols=33 Identities=12% Similarity=0.202 Sum_probs=23.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.++|++.... |. --..|++.|.++||+|+.+..
T Consensus 11 ~~~vlVTGat--G~--iG~~l~~~L~~~g~~V~~~~r 43 (342)
T 1y1p_A 11 GSLVLVTGAN--GF--VASHVVEQLLEHGYKVRGTAR 43 (342)
T ss_dssp TCEEEEETTT--SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCc--cH--HHHHHHHHHHHCCCEEEEEeC
Confidence 4566665433 32 346789999999999998875
No 287
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=30.47 E-value=61 Score=25.66 Aligned_cols=28 Identities=21% Similarity=0.219 Sum_probs=22.8
Q ss_pred EEEEEecccccCCHHHHHHHHHHHhhCC
Q 012735 264 VIYVSFGSIAAVSEAEFLEIAWGLANCK 291 (457)
Q Consensus 264 vv~vs~Gs~~~~~~~~~~~~~~al~~~~ 291 (457)
+.|+++||....+.+.++..++.+.+..
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCC
Confidence 5799999998767778888888887653
No 288
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=30.37 E-value=70 Score=25.36 Aligned_cols=38 Identities=16% Similarity=0.040 Sum_probs=30.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++-.+++..+..--..+.+-+|..-++.|++|+++.+-
T Consensus 5 ~kl~II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf 42 (160)
T 3pnx_A 5 KKMNLLLFSGDYDKALASLIIANAAREMEIEVTIFCAF 42 (160)
T ss_dssp CEEEEEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred CcEEEEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 34445556667788999999999999999999998873
No 289
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=30.21 E-value=86 Score=24.83 Aligned_cols=28 Identities=21% Similarity=0.255 Sum_probs=24.4
Q ss_pred EEEEEecccccCCHHHHHHHHHHHhhCC
Q 012735 264 VIYVSFGSIAAVSEAEFLEIAWGLANCK 291 (457)
Q Consensus 264 vv~vs~Gs~~~~~~~~~~~~~~al~~~~ 291 (457)
.+|+++||....+...++..++++...+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 4899999999888999999899998764
No 290
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=30.16 E-value=63 Score=25.59 Aligned_cols=28 Identities=21% Similarity=0.219 Sum_probs=23.6
Q ss_pred EEEEEecccccCCHHHHHHHHHHHhhCC
Q 012735 264 VIYVSFGSIAAVSEAEFLEIAWGLANCK 291 (457)
Q Consensus 264 vv~vs~Gs~~~~~~~~~~~~~~al~~~~ 291 (457)
.+|+++||....+...++..++++.+.+
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 4899999999777888888888888753
No 291
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=30.15 E-value=68 Score=26.79 Aligned_cols=32 Identities=19% Similarity=0.262 Sum_probs=22.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|.++++.++ | .--.++++.|+++||+|.++..
T Consensus 6 k~vlVtGas-g--giG~~~a~~l~~~G~~V~~~~r 37 (234)
T 2ehd_A 6 GAVLITGAS-R--GIGEATARLLHAKGYRVGLMAR 37 (234)
T ss_dssp CEEEESSTT-S--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-c--HHHHHHHHHHHHCCCEEEEEEC
Confidence 344455443 3 3457899999999999988775
No 292
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=30.09 E-value=67 Score=28.16 Aligned_cols=38 Identities=5% Similarity=-0.034 Sum_probs=27.6
Q ss_pred CcEEEEEcCCCc-cCHH---HHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQ-GHIS---PMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~-gH~~---p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++||+++..+.. -|-. ....++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 468888876543 2322 4468999999999999988764
No 293
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=30.07 E-value=30 Score=30.86 Aligned_cols=32 Identities=13% Similarity=0.045 Sum_probs=26.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+|||+|+..|+.|- .+|..|. .||+|+++...
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSC
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECC
Confidence 37999998887664 6788899 99999999874
No 294
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=29.92 E-value=29 Score=31.45 Aligned_cols=35 Identities=3% Similarity=0.218 Sum_probs=25.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCC-eEEEEeCC
Q 012735 4 RKGRRLVLFPLPLQGHISPMLQLANILHSQGF-TITIIHTS 43 (457)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh-~Vt~~~~~ 43 (457)
++++||.++..|..|. ++|..|+..|| +|+++-..
T Consensus 7 ~~~~kI~VIGaG~vG~-----~lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 7 QRRKKVAMIGSGMIGG-----TMGYLCALRELADVVLYDVV 42 (331)
T ss_dssp SCCCEEEEECCSHHHH-----HHHHHHHHHTCCEEEEECSS
T ss_pred CCCCEEEEECCCHHHH-----HHHHHHHhCCCCeEEEEECC
Confidence 4568999987644443 38899999999 98777653
No 295
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=29.84 E-value=64 Score=27.43 Aligned_cols=32 Identities=13% Similarity=0.108 Sum_probs=23.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|.++++.++. .--.++|++|+++|++|.++..
T Consensus 2 k~vlVTGas~---gIG~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 2 SIIVISGCAT---GIGAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CEEEEETTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCC---HHHHHHHHHHHHCCCEEEEEeC
Confidence 4455554442 3467899999999999988765
No 296
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=29.71 E-value=71 Score=28.27 Aligned_cols=38 Identities=16% Similarity=0.204 Sum_probs=30.0
Q ss_pred cEEEEEc-CCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 012735 7 RRLVLFP-LPLQGHISPMLQLANILHSQGFTITIIHTSF 44 (457)
Q Consensus 7 ~~il~~~-~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 44 (457)
+.|+|.. -++-|-..-...||..|+++|..|.++-...
T Consensus 105 kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 105 NILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp CEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred eEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 3444444 3567999999999999999999999987653
No 297
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=29.55 E-value=43 Score=28.71 Aligned_cols=39 Identities=26% Similarity=0.287 Sum_probs=25.5
Q ss_pred CCcEEEEEcCCCccCH--HHHHHHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFPLPLQGHI--SPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~--~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++.-++++..++.+|- .-+..+|+.|+++|+.|..+-..
T Consensus 54 ~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~r 94 (259)
T 4ao6_A 54 SSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGP 94 (259)
T ss_dssp CCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCC
T ss_pred CCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccC
Confidence 3455777777777763 34788999999999998877654
No 298
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=29.49 E-value=64 Score=27.92 Aligned_cols=34 Identities=9% Similarity=0.083 Sum_probs=27.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+-|+++++.++.| --.++|++|+++|++|.+...
T Consensus 10 ~GK~alVTGas~G---IG~aia~~la~~Ga~V~~~~r 43 (261)
T 4h15_A 10 RGKRALITAGTKG---AGAATVSLFLELGAQVLTTAR 43 (261)
T ss_dssp TTCEEEESCCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeccCcH---HHHHHHHHHHHcCCEEEEEEC
Confidence 4578888887764 457899999999999988765
No 299
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=29.45 E-value=47 Score=29.49 Aligned_cols=32 Identities=13% Similarity=0.169 Sum_probs=23.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+|+++.. .|.+ -..|+++|.++||+|+.++..
T Consensus 13 ~ilVtGa--tG~i--G~~l~~~L~~~g~~V~~l~R~ 44 (318)
T 2r6j_A 13 KILIFGG--TGYI--GNHMVKGSLKLGHPTYVFTRP 44 (318)
T ss_dssp CEEEETT--TSTT--HHHHHHHHHHTTCCEEEEECT
T ss_pred eEEEECC--CchH--HHHHHHHHHHCCCcEEEEECC
Confidence 6666543 3433 357889999999999988864
No 300
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=29.43 E-value=66 Score=27.93 Aligned_cols=33 Identities=15% Similarity=0.112 Sum_probs=25.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.|.++++.++.| --.++|+.|+++|++|.++..
T Consensus 30 ~k~vlVTGas~G---IG~aia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 30 GASAIVSGGAGG---LGEATVRRLHADGLGVVIADL 62 (281)
T ss_dssp TEEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 466677766644 467899999999999988765
No 301
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=29.39 E-value=73 Score=28.43 Aligned_cols=34 Identities=12% Similarity=0.070 Sum_probs=24.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.++|+++...+ .--..|+++|+++||+|+.+...
T Consensus 21 ~~~vlVTGatG----~iG~~l~~~L~~~g~~V~~~~r~ 54 (333)
T 2q1w_A 21 MKKVFITGICG----QIGSHIAELLLERGDKVVGIDNF 54 (333)
T ss_dssp CCEEEEETTTS----HHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCCcc----HHHHHHHHHHHHCCCEEEEEECC
Confidence 45666664333 34567899999999999998763
No 302
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=29.35 E-value=1.1e+02 Score=27.71 Aligned_cols=72 Identities=11% Similarity=0.150 Sum_probs=50.8
Q ss_pred CHHHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCCCCCcccccChhHHHH
Q 012735 276 SEAEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVGAFWTHNGWNSTLE 355 (457)
Q Consensus 276 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~e 355 (457)
+.+..+.+.+++.+...+.||...++. .-. ++.++++...+-++|+. ||-..-...++-
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~-----------g~~--------rlL~~lD~~~i~~~PK~--~~GySDiTaL~~ 121 (331)
T 4e5s_A 63 ISSRVQDLHEAFRDPNVKAILTTLGGY-----------NSN--------GLLKYLDYDLIRENPKF--FCGYSDITALNN 121 (331)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCS-----------CGG--------GGGGGCCHHHHHTSCCE--EEECGGGHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccc-----------cHH--------HHHhhcChhHHHhCCeE--EEEecchHHHHH
Confidence 456677788888877778888877663 111 56677777777677877 887777777777
Q ss_pred HHh--hCCcccccCc
Q 012735 356 SIC--EGIPMICMPC 368 (457)
Q Consensus 356 al~--~gvP~v~~P~ 368 (457)
+++ .|++.+-=|.
T Consensus 122 al~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 122 AIYTKTGLVTYSGPH 136 (331)
T ss_dssp HHHHHHCBCEEECCC
T ss_pred HHHHhhCCcEEEccc
Confidence 776 4777666555
No 303
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=29.25 E-value=68 Score=29.52 Aligned_cols=34 Identities=15% Similarity=0.146 Sum_probs=23.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.++|++....+ .--..|+++|+++||+|+.+..
T Consensus 10 ~~~~vlVTG~tG----fIG~~l~~~L~~~G~~V~~~~r 43 (404)
T 1i24_A 10 HGSRVMVIGGDG----YCGWATALHLSKKNYEVCIVDN 43 (404)
T ss_dssp --CEEEEETTTS----HHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCeEEEeCCCc----HHHHHHHHHHHhCCCeEEEEEe
Confidence 356677665444 3346789999999999998864
No 304
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=29.23 E-value=76 Score=26.86 Aligned_cols=32 Identities=9% Similarity=0.080 Sum_probs=22.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|.++++.++ | .--.+++++|+++|++|.++..
T Consensus 12 k~vlITGas-g--giG~~la~~l~~~G~~V~~~~r 43 (254)
T 2wsb_A 12 ACAAVTGAG-S--GIGLEICRAFAASGARLILIDR 43 (254)
T ss_dssp CEEEEETTT-S--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCC-c--HHHHHHHHHHHHCCCEEEEEeC
Confidence 445555444 3 3457899999999999988865
No 305
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=29.23 E-value=57 Score=28.53 Aligned_cols=37 Identities=16% Similarity=0.214 Sum_probs=30.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+.|.|..-|+-|-..-...||..|+++|++|.++-..
T Consensus 3 kvIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D 39 (289)
T 2afh_E 3 RQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred eEEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 3466666667799999999999999999999988764
No 306
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=29.22 E-value=72 Score=28.17 Aligned_cols=22 Identities=23% Similarity=0.036 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHCCCeEEEEeCC
Q 012735 22 PMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 22 p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
--..|+++|+++||+|+.+...
T Consensus 24 iG~~l~~~L~~~G~~V~~~~r~ 45 (321)
T 2pk3_A 24 VGKYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp HHHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHHCCCEEEEEecC
Confidence 3467899999999999998764
No 307
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=29.18 E-value=49 Score=32.16 Aligned_cols=34 Identities=21% Similarity=0.149 Sum_probs=29.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.+||.|+..++.| |.++|+.|.++|++|+..-..
T Consensus 19 ~~~i~~iGiGg~G----ms~lA~~l~~~G~~V~~sD~~ 52 (524)
T 3hn7_A 19 GMHIHILGICGTF----MGSLALLARALGHTVTGSDAN 52 (524)
T ss_dssp CCEEEEETTTSHH----HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEEEecHhh----HHHHHHHHHhCCCEEEEECCC
Confidence 5789999999855 888999999999999987653
No 308
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=29.11 E-value=63 Score=23.63 Aligned_cols=57 Identities=2% Similarity=-0.059 Sum_probs=34.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCeeEEecC
Q 012735 4 RKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTSFNSPNPSSHPHLTFHFIQ 61 (457)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~i~ 61 (457)
.+++||++++..|.|--.-.-.+=++..++|.+|.+...+... ......+++.+-+.
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a~~~~~-~~~~~~~~DvvLLg 60 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSGAYGA-HYDIMGVYDLIILA 60 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTS-CTTTGGGCSEEEEC
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEcchHH-HHhhccCCCEEEEC
Confidence 4678898888887644444445555555679999986643222 11112456676665
No 309
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=29.09 E-value=76 Score=28.58 Aligned_cols=34 Identities=21% Similarity=0.180 Sum_probs=24.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.++|++.... |. --..|+++|.++||+|+.+...
T Consensus 9 ~~~vlVtGat--G~--iG~~l~~~L~~~g~~V~~~~r~ 42 (357)
T 1rkx_A 9 GKRVFVTGHT--GF--KGGWLSLWLQTMGATVKGYSLT 42 (357)
T ss_dssp TCEEEEETTT--SH--HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCC--ch--HHHHHHHHHHhCCCeEEEEeCC
Confidence 3566666433 33 3467899999999999998764
No 310
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=28.96 E-value=1.2e+02 Score=23.66 Aligned_cols=38 Identities=3% Similarity=0.084 Sum_probs=29.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+++||+|+.+++... .-+....+.|.+.|++|.+++..
T Consensus 1 ~~~ki~il~~~g~~~-~e~~~~~~~l~~ag~~v~~vs~~ 38 (168)
T 3l18_A 1 ASMKVLFLSADGFED-LELIYPLHRIKEEGHEVYVASFQ 38 (168)
T ss_dssp CCCEEEEECCTTBCH-HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEEEeCCCccH-HHHHHHHHHHHHCCCEEEEEECC
Confidence 367899998887543 44556678888899999999985
No 311
>1xfi_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2G17340, center for eukaryotic structural genomics; 1.70A {Arabidopsis thaliana} SCOP: e.50.1.1 PDB: 2q40_A
Probab=28.74 E-value=53 Score=30.20 Aligned_cols=38 Identities=18% Similarity=0.202 Sum_probs=30.8
Q ss_pred CcEEEEEcCCCc-cCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQ-GHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~-gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.++|++++=.+. .-+.=++.|++.|.++|++|++.+-.
T Consensus 212 ~k~Vl~v~DNAG~Eiv~D~L~La~~Ll~~g~kVvl~vK~ 250 (367)
T 1xfi_A 212 WKKAVIFVDNSGADIILGILPFARELLRRGAQVVLAANE 250 (367)
T ss_dssp CCEEEEECCBTTHHHHHTHHHHHHHHHHTTCEEEEEEBS
T ss_pred CCEEEEEecCCCchhhccHHHHHHHHHHcCCEEEEEECC
Confidence 478999987774 44444599999999999999998875
No 312
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=28.72 E-value=81 Score=26.50 Aligned_cols=37 Identities=11% Similarity=0.133 Sum_probs=27.1
Q ss_pred cEEEEEcCCCccC--HHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGH--ISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH--~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
..++++..|..|+ ..-+..+++.|.++|+.|..+-..
T Consensus 46 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 84 (270)
T 3pfb_A 46 YDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFN 84 (270)
T ss_dssp EEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccc
Confidence 4455555555555 666889999999999998877654
No 313
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=28.68 E-value=66 Score=27.51 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=25.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.|+++++.++.| --.++|++|+++|++|.++..
T Consensus 6 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 38 (257)
T 3imf_A 6 EKVVIITGGSSG---MGKGMATRFAKEGARVVITGR 38 (257)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 356677766543 567899999999999988765
No 314
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=28.68 E-value=2.5e+02 Score=23.20 Aligned_cols=38 Identities=18% Similarity=0.312 Sum_probs=28.5
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 3 QRKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 3 ~~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
|.+++|+.+++. +-.|...+--..|.++|.+|.=+++.
T Consensus 22 p~~~Lr~avVCa---SN~NRSMEAH~~L~k~Gf~V~SfGTG 59 (214)
T 4h3k_B 22 PSSPLRVAVVSS---SNQNRSMEAHNILSKRGFSVRSFGTG 59 (214)
T ss_dssp ----CEEEEEES---SSSSHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCCCCeEEEECC---CCcchhHHHHHHHHHCCCceEeecCC
Confidence 346788888875 45688888888999999999998885
No 315
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=28.64 E-value=65 Score=27.83 Aligned_cols=34 Identities=12% Similarity=0.113 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.|+++++.++. .--.++|++|+++|++|.+...
T Consensus 25 ~~k~vlITGas~---gIG~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 25 DTPVVLVTGGSR---GIGAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp CSCEEEETTTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCc---hHHHHHHHHHHHCCCEEEEEcC
Confidence 346677776654 3467899999999999987754
No 316
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=28.56 E-value=2e+02 Score=25.37 Aligned_cols=106 Identities=10% Similarity=0.075 Sum_probs=57.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCC-CCCCCCCCCCCeeEEecCCCCCCCCCCccCHHHHHHH
Q 012735 4 RKGRRLVLFPLPLQGHISPMLQLANILHSQ--GFTITIIHTS-FNSPNPSSHPHLTFHFIQENLSASEASTDDLVAFVSL 80 (457)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~~-~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~ 80 (457)
.+++||+++.++. || -+.+|..+-.+- ..+|..+.+. ..........|+.+..+|.... +-
T Consensus 93 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~gIp~~~~~~~~~-------~r------ 156 (292)
T 3lou_A 93 AARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQHGLPFRHFPITAD-------TK------ 156 (292)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHHTTCCEEECCCCSS-------CH------
T ss_pred CCCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHHcCCCEEEeCCCcC-------CH------
Confidence 4578898888766 55 355555554442 4677776653 2211122225787777764210 00
Q ss_pred HHHhcchhHHHHHHHHhhccCCCCeeEEEeCCCc-chHHHHHhHcCCCeEEEecc
Q 012735 81 LNTKCLVPFRDCLAKLLADVEEEPIACLISDAML-PFTQAVADSLKLPRIVLRTG 134 (457)
Q Consensus 81 ~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~-~~~~~~A~~l~iP~v~~~~~ 134 (457)
......+.+.++++ +||+||.-.+. .-...+-+.+.-.++-++++
T Consensus 157 --~~~~~~~~~~l~~~-------~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 202 (292)
T 3lou_A 157 --AQQEAQWLDVFETS-------GAELVILARYMQVLSPEASARLANRAINIHHS 202 (292)
T ss_dssp --HHHHHHHHHHHHHH-------TCSEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred --HHHHHHHHHHHHHh-------CCCEEEecCchhhCCHHHHhhhcCCeEEeCCC
Confidence 01111222233333 89999987654 44445555566677777665
No 317
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=28.52 E-value=91 Score=27.36 Aligned_cols=37 Identities=11% Similarity=0.165 Sum_probs=24.2
Q ss_pred CcEEEEE-cCCCccCHHH--HHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLF-PLPLQGHISP--MLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~-~~~~~gH~~p--~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.||||++ ..|-..-++- .-.+.+.|.++||+|+++--
T Consensus 22 ~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~DL 61 (280)
T 4gi5_A 22 SMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSDL 61 (280)
T ss_dssp CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred CCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 4666555 4554443443 23467888899999999764
No 318
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=28.52 E-value=80 Score=28.40 Aligned_cols=34 Identities=9% Similarity=-0.013 Sum_probs=24.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.++|+++... | .--..|+++|+++||+|+.++..
T Consensus 27 ~~~vlVtGat--G--~iG~~l~~~L~~~g~~V~~~~r~ 60 (352)
T 1sb8_A 27 PKVWLITGVA--G--FIGSNLLETLLKLDQKVVGLDNF 60 (352)
T ss_dssp CCEEEEETTT--S--HHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCeEEEECCC--c--HHHHHHHHHHHHCCCEEEEEeCC
Confidence 4566666443 3 33467899999999999998763
No 319
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=28.42 E-value=65 Score=28.01 Aligned_cols=31 Identities=13% Similarity=0.113 Sum_probs=25.3
Q ss_pred CeeEEEeCCCc------chHHHHHhHcCCCeEEEecc
Q 012735 104 PIACLISDAML------PFTQAVADSLKLPRIVLRTG 134 (457)
Q Consensus 104 ~pDlvi~D~~~------~~~~~~A~~l~iP~v~~~~~ 134 (457)
+||+|++..-. ..+..+|.+||+|++.....
T Consensus 112 ~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 148 (264)
T 1o97_C 112 APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVAD 148 (264)
T ss_dssp CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEE
Confidence 89999987644 26889999999999987654
No 320
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=28.39 E-value=77 Score=27.38 Aligned_cols=35 Identities=9% Similarity=0.075 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+.|.++++.++. ---.++|++|+++|++|.++...
T Consensus 13 ~~k~vlVTGas~---GIG~aia~~l~~~G~~V~~~~r~ 47 (269)
T 3vtz_A 13 TDKVAIVTGGSS---GIGLAVVDALVRYGAKVVSVSLD 47 (269)
T ss_dssp TTCEEEESSTTS---HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCC---HHHHHHHHHHHHCCCEEEEEeCC
Confidence 456666666654 34578999999999999887753
No 321
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=28.38 E-value=69 Score=28.21 Aligned_cols=32 Identities=6% Similarity=-0.078 Sum_probs=22.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
++|+++...+ . --..|+++|.++||+|+.++.
T Consensus 3 ~~vlVtGatG--~--iG~~l~~~L~~~g~~V~~~~r 34 (315)
T 2ydy_A 3 RRVLVTGATG--L--LGRAVHKEFQQNNWHAVGCGF 34 (315)
T ss_dssp CEEEEETTTS--H--HHHHHHHHHHTTTCEEEEEC-
T ss_pred CeEEEECCCc--H--HHHHHHHHHHhCCCeEEEEcc
Confidence 4666654433 2 345789999999999998874
No 322
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=28.34 E-value=66 Score=27.26 Aligned_cols=39 Identities=15% Similarity=0.034 Sum_probs=25.4
Q ss_pred CCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 1 MDQRKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 1 ~~~~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|.+.-+.+.++++.++ |. --..++++|+++||+|.++..
T Consensus 1 m~~~l~~k~vlVTGas-gg--iG~~~a~~l~~~G~~V~~~~r 39 (258)
T 3afn_B 1 MFPDLKGKRVLITGSS-QG--IGLATARLFARAGAKVGLHGR 39 (258)
T ss_dssp -CGGGTTCEEEETTCS-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCcCCCCCEEEEeCCC-Ch--HHHHHHHHHHHCCCEEEEECC
Confidence 4333333455555444 32 356899999999999988775
No 323
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=28.33 E-value=88 Score=29.48 Aligned_cols=38 Identities=11% Similarity=0.194 Sum_probs=33.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHC-CCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQ-GFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~-Gh~Vt~~~~~ 43 (457)
+..|+++..++-|-..-...||..|+.+ |+.|.++...
T Consensus 100 ~~vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D 138 (433)
T 2xxa_A 100 PAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSAD 138 (433)
T ss_dssp SEEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecC
Confidence 4567777777889999999999999999 9999999886
No 324
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=28.32 E-value=55 Score=30.15 Aligned_cols=37 Identities=14% Similarity=0.171 Sum_probs=28.7
Q ss_pred CcEEEEEcCCCcc-C---HHHHHHHHHHH-HHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQG-H---ISPMLQLANIL-HSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~g-H---~~p~l~la~~L-~~~Gh~Vt~~~~ 42 (457)
|+||+++..+-.+ | +.....++++| .++||+|..+-.
T Consensus 3 k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 3 KKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 6788888766544 3 33578899999 999999999865
No 325
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=28.24 E-value=1.7e+02 Score=21.15 Aligned_cols=55 Identities=9% Similarity=0.118 Sum_probs=35.1
Q ss_pred HHHHHHhh-----CCcccccCccchhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHhcc
Q 012735 352 STLESICE-----GIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVMVE 408 (457)
Q Consensus 352 s~~eal~~-----gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~~ 408 (457)
.+.+.+.. .+|+|++--..+.. ...+..+ .|+---+.+.++.++|.++|++++..
T Consensus 68 ~~~~~lr~~~~~~~~pii~~s~~~~~~-~~~~~~~-~g~~~~l~KP~~~~~L~~~l~~~l~~ 127 (129)
T 3h1g_A 68 DLVKKVRSDSRFKEIPIIMITAEGGKA-EVITALK-AGVNNYIVKPFTPQVLKEKLEVVLGT 127 (129)
T ss_dssp HHHHHHHTSTTCTTCCEEEEESCCSHH-HHHHHHH-HTCCEEEESCCCHHHHHHHHHHHHCC
T ss_pred HHHHHHHhcCCCCCCeEEEEeCCCChH-HHHHHHH-cCccEEEeCCCCHHHHHHHHHHHhcc
Confidence 44555543 56777665444433 3334444 37655566679999999999999865
No 326
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=28.15 E-value=45 Score=30.30 Aligned_cols=30 Identities=10% Similarity=0.125 Sum_probs=20.5
Q ss_pred CeeEEEeCCCcc-hHHHHHhHcCCCeEEEec
Q 012735 104 PIACLISDAMLP-FTQAVADSLKLPRIVLRT 133 (457)
Q Consensus 104 ~pDlvi~D~~~~-~~~~~A~~l~iP~v~~~~ 133 (457)
+||+||...... -...+.+.+|||++.+..
T Consensus 96 ~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~ 126 (346)
T 2etv_A 96 QPDVVFITYVDRXTAXDIQEXTGIPVVVLSY 126 (346)
T ss_dssp CCSEEEEESCCHHHHHHHHHHHTSCEEEECC
T ss_pred CCCEEEEeCCccchHHHHHHhcCCcEEEEec
Confidence 999999865432 223345678999998743
No 327
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=28.07 E-value=57 Score=26.34 Aligned_cols=38 Identities=13% Similarity=0.126 Sum_probs=27.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++++|+++...++-..- ++...+.|.+.|++|++++..
T Consensus 7 t~~~v~il~~~gFe~~E-~~~p~~~l~~ag~~V~~~s~~ 44 (177)
T 4hcj_A 7 TNNILYVMSGQNFQDEE-YFESKKIFESAGYKTKVSSTF 44 (177)
T ss_dssp CCEEEEECCSEEECHHH-HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCCccHHH-HHHHHHHHHHCCCEEEEEECC
Confidence 45556666666654443 456678889999999999975
No 328
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=28.05 E-value=73 Score=27.30 Aligned_cols=33 Identities=18% Similarity=0.129 Sum_probs=24.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.|+++++.++. .--.++|+.|+++|++|.++..
T Consensus 7 ~k~vlVTGas~---gIG~~ia~~l~~~G~~V~~~~r 39 (262)
T 1zem_A 7 GKVCLVTGAGG---NIGLATALRLAEEGTAIALLDM 39 (262)
T ss_dssp TCEEEEETTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCc---HHHHHHHHHHHHCCCEEEEEeC
Confidence 35555665543 3457899999999999988765
No 329
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=27.88 E-value=78 Score=28.08 Aligned_cols=33 Identities=6% Similarity=0.080 Sum_probs=23.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++|+++...+ .--..|++.|.++||+|+.+...
T Consensus 2 ~~ilVtGatG----~iG~~l~~~L~~~g~~V~~~~r~ 34 (330)
T 2c20_A 2 NSILICGGAG----YIGSHAVKKLVDEGLSVVVVDNL 34 (330)
T ss_dssp CEEEEETTTS----HHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEECCCc----HHHHHHHHHHHhCCCEEEEEeCC
Confidence 4666654333 33467899999999999998753
No 330
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=27.83 E-value=33 Score=30.37 Aligned_cols=32 Identities=16% Similarity=0.073 Sum_probs=26.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
++||.|+..+..|. .+|+.|+++||+|+++..
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 46899998777664 689999999999998865
No 331
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=27.80 E-value=64 Score=27.10 Aligned_cols=33 Identities=15% Similarity=0.097 Sum_probs=23.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
|.++++.++. .--.++++.|+++|++|.++...
T Consensus 4 k~vlITGas~---gIG~~~a~~l~~~G~~V~~~~r~ 36 (236)
T 1ooe_A 4 GKVIVYGGKG---ALGSAILEFFKKNGYTVLNIDLS 36 (236)
T ss_dssp EEEEEETTTS---HHHHHHHHHHHHTTEEEEEEESS
T ss_pred CEEEEECCCc---HHHHHHHHHHHHCCCEEEEEecC
Confidence 4455554443 34578999999999999988753
No 332
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=27.77 E-value=50 Score=29.49 Aligned_cols=34 Identities=9% Similarity=0.127 Sum_probs=26.9
Q ss_pred cEEEEEcCCCc--cCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQ--GHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~--gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.+|++++.++- |+ .+.+|+.|..+|++|+++...
T Consensus 133 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEec
Confidence 58888887653 33 478999999999999998663
No 333
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=27.71 E-value=85 Score=26.53 Aligned_cols=34 Identities=21% Similarity=0.209 Sum_probs=24.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.|.++++.++.| --.++|+.|+++|++|.+...
T Consensus 13 ~~k~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r 46 (249)
T 3f9i_A 13 TGKTSLITGASSG---IGSAIARLLHKLGSKVIISGS 46 (249)
T ss_dssp TTCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEcC
Confidence 4455566655532 457899999999999988765
No 334
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=27.68 E-value=44 Score=27.56 Aligned_cols=31 Identities=26% Similarity=0.195 Sum_probs=22.8
Q ss_pred cEEEEEc-CCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFP-LPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~-~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|||+++. .+..| ..+++.|.++||+|+++..
T Consensus 1 m~i~iiGa~G~~G-----~~ia~~l~~~g~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLGGTGNLG-----KGLALRLATLGHEIVVGSR 32 (212)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHTTTCEEEEEES
T ss_pred CeEEEEcCCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 4777775 44333 4689999999999998765
No 335
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=27.67 E-value=34 Score=30.77 Aligned_cols=31 Identities=19% Similarity=0.134 Sum_probs=24.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|||.|+..|..| ..+|..|.++||+|+++..
T Consensus 1 m~I~iiG~G~mG-----~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMG-----SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEEc
Confidence 478888776555 4678999999999999876
No 336
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=27.64 E-value=27 Score=33.49 Aligned_cols=30 Identities=17% Similarity=0.257 Sum_probs=22.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIH 41 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~ 41 (457)
++|+++..|-. -|.-|..|+++||+|+++=
T Consensus 2 k~VvVIGaG~~-----GL~aA~~La~~G~~V~VlE 31 (501)
T 4dgk_A 2 KPTTVIGAGFG-----GLALAIRLQAAGIPVLLLE 31 (501)
T ss_dssp CCEEEECCHHH-----HHHHHHHHHHTTCCEEEEC
T ss_pred CCEEEECCcHH-----HHHHHHHHHHCCCcEEEEc
Confidence 46777765533 3777889999999999964
No 337
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=27.62 E-value=91 Score=25.68 Aligned_cols=22 Identities=18% Similarity=0.117 Sum_probs=18.4
Q ss_pred HHHHHHHHHH-HCCCeEEEEeCC
Q 012735 22 PMLQLANILH-SQGFTITIIHTS 43 (457)
Q Consensus 22 p~l~la~~L~-~~Gh~Vt~~~~~ 43 (457)
--.+++++|+ ++||+|+.++..
T Consensus 17 iG~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 17 IAQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp HHHHHHHHHHHHCCCEEEEEESS
T ss_pred HHHHHHHHHHhcCCceEEEEecC
Confidence 3578999999 899999998764
No 338
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=27.58 E-value=65 Score=28.97 Aligned_cols=34 Identities=9% Similarity=-0.135 Sum_probs=24.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+++|+++...+ .--..|+++|.++||+|+.++..
T Consensus 10 ~~~IlVtGatG----~iG~~l~~~L~~~g~~V~~l~R~ 43 (346)
T 3i6i_A 10 KGRVLIAGATG----FIGQFVATASLDAHRPTYILARP 43 (346)
T ss_dssp -CCEEEECTTS----HHHHHHHHHHHHTTCCEEEEECS
T ss_pred CCeEEEECCCc----HHHHHHHHHHHHCCCCEEEEECC
Confidence 35677765433 33457899999999999998874
No 339
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=27.57 E-value=1.1e+02 Score=26.12 Aligned_cols=33 Identities=12% Similarity=0.050 Sum_probs=22.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
|.++++.++ | .--.+++++|+++|++|.++...
T Consensus 7 k~vlVTGas-~--gIG~~ia~~l~~~G~~V~~~~r~ 39 (256)
T 2d1y_A 7 KGVLVTGGA-R--GIGRAIAQAFAREGALVALCDLR 39 (256)
T ss_dssp CEEEEETTT-S--HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCC-C--HHHHHHHHHHHHCCCEEEEEeCC
Confidence 344444443 2 34568999999999999887653
No 340
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=27.47 E-value=1.1e+02 Score=21.37 Aligned_cols=33 Identities=9% Similarity=0.071 Sum_probs=24.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
...|++++..+ ......++.|.+.|++|..+..
T Consensus 56 ~~~ivvyC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (100)
T 3foj_A 56 NETYYIICKAG----GRSAQVVQYLEQNGVNAVNVEG 88 (100)
T ss_dssp TSEEEEECSSS----HHHHHHHHHHHTTTCEEEEETT
T ss_pred CCcEEEEcCCC----chHHHHHHHHHHCCCCEEEecc
Confidence 35677777443 4566788999999998887754
No 341
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=27.43 E-value=39 Score=29.43 Aligned_cols=32 Identities=16% Similarity=0.128 Sum_probs=23.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|+|+++...+ .--..|++.|.++||+|+.++.
T Consensus 6 m~ilVtGatG----~iG~~l~~~L~~~g~~V~~~~r 37 (287)
T 3sc6_A 6 ERVIITGANG----QLGKQLQEELNPEEYDIYPFDK 37 (287)
T ss_dssp EEEEEESTTS----HHHHHHHHHSCTTTEEEEEECT
T ss_pred eEEEEECCCC----HHHHHHHHHHHhCCCEEEEecc
Confidence 3677665433 3345789999999999999876
No 342
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=27.40 E-value=54 Score=28.91 Aligned_cols=37 Identities=8% Similarity=0.168 Sum_probs=27.5
Q ss_pred cEEEEEcCCCccC---HHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGH---ISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH---~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
|||+++..+.... ......++++|.++||+|.++...
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 5898888774221 233467999999999999998764
No 343
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=27.38 E-value=67 Score=27.29 Aligned_cols=32 Identities=16% Similarity=-0.012 Sum_probs=23.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|.++++.++. .--.++|++|+++|++|.++..
T Consensus 3 k~vlVTGas~---gIG~~ia~~l~~~G~~V~~~~r 34 (247)
T 3dii_A 3 RGVIVTGGGH---GIGKQICLDFLEAGDKVCFIDI 34 (247)
T ss_dssp CEEEEESTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCC---HHHHHHHHHHHHCCCEEEEEeC
Confidence 4555665553 2457899999999999988765
No 344
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=27.20 E-value=3.2e+02 Score=23.94 Aligned_cols=106 Identities=8% Similarity=0.100 Sum_probs=57.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCC-CC-CCCCCCCCCeeEEecCCCCCCCCCCccCHHHHHH
Q 012735 4 RKGRRLVLFPLPLQGHISPMLQLANILHSQ--GFTITIIHTS-FN-SPNPSSHPHLTFHFIQENLSASEASTDDLVAFVS 79 (457)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~~-~~-~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (457)
.+++||+++.++. || -+.+|.++-.+- ..+|..+.+. .. ........|+.+..+|... .+
T Consensus 86 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~~~a~~~~A~~~gIp~~~~~~~~-------~~------ 149 (287)
T 3nrb_A 86 TDRKKVVIMVSKF-DH--CLGDLLYRHRLGELDMEVVGIISNHPREALSVSLVGDIPFHYLPVTP-------AT------ 149 (287)
T ss_dssp TCCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSCGGGCCCCCCTTSCEEECCCCG-------GG------
T ss_pred CCCcEEEEEEeCC-Cc--CHHHHHHHHHCCCCCeEEEEEEeCChHHHHHHHHHcCCCEEEEeccC-------cc------
Confidence 4578898888776 44 344555555442 3577766653 22 2223334688888776321 00
Q ss_pred HHHHhcchhHHHHHHHHhhccCCCCeeEEEeCCCc-chHHHHHhHcCCCeEEEecc
Q 012735 80 LLNTKCLVPFRDCLAKLLADVEEEPIACLISDAML-PFTQAVADSLKLPRIVLRTG 134 (457)
Q Consensus 80 ~~~~~~~~~~~~~l~~l~~~~~~~~pDlvi~D~~~-~~~~~~A~~l~iP~v~~~~~ 134 (457)
.......+.+.++++ +||+||.-.+. .-...+-+.+.-.++-++++
T Consensus 150 --r~~~~~~~~~~l~~~-------~~Dlivlagym~il~~~~l~~~~~~~iNiHpS 196 (287)
T 3nrb_A 150 --KAAQESQIKNIVTQS-------QADLIVLARYMQILSDDLSAFLSGRCINIHHS 196 (287)
T ss_dssp --HHHHHHHHHHHHHHH-------TCSEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred --hhhHHHHHHHHHHHh-------CCCEEEhhhhhhhcCHHHHhhccCCeEEECcc
Confidence 011111222233333 89999987654 44455555566677777665
No 345
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=27.16 E-value=48 Score=29.89 Aligned_cols=31 Identities=16% Similarity=0.145 Sum_probs=20.8
Q ss_pred CeeEEEeCCCcchHHHHHhHcCCCeEEEecc
Q 012735 104 PIACLISDAMLPFTQAVADSLKLPRIVLRTG 134 (457)
Q Consensus 104 ~pDlvi~D~~~~~~~~~A~~l~iP~v~~~~~ 134 (457)
+||+||......-...--+.+|||++.+.+.
T Consensus 116 ~PDLIi~~~~~~~~~~~L~~~gipvv~~~~~ 146 (335)
T 4hn9_A 116 TPDVVFLPMKLKKTADTLESLGIKAVVVNPE 146 (335)
T ss_dssp CCSEEEEEGGGHHHHHHHHHTTCCEEEECCC
T ss_pred CCCEEEEeCcchhHHHHHHHcCCCEEEEcCC
Confidence 9999998754322233345679999987543
No 346
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=27.13 E-value=2.4e+02 Score=23.93 Aligned_cols=94 Identities=11% Similarity=0.005 Sum_probs=49.5
Q ss_pred cEEEEEcCCCccCH-HHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCCCCCccCHHHHHHHHHHhc
Q 012735 7 RRLVLFPLPLQGHI-SPMLQLANILHSQGFTITIIHTSFNSPNPSSHPHLTFHFIQENLSASEASTDDLVAFVSLLNTKC 85 (457)
Q Consensus 7 ~~il~~~~~~~gH~-~p~l~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (457)
|||+++=..+.-++ ..+...++.++.-|-+|.+.+.++... .+ .+..+.- ..
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~~gp~-----------~i-----------~~~~d~~-----~a 54 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPRAGVP-----------SI-----------EGHFDEA-----IA 54 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCSSSCS-----------SC-----------CSHHHHH-----HH
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCch-----------hh-----------cChhHHH-----HH
Confidence 56666655554444 566778887776678887777642110 00 0111111 11
Q ss_pred chhHHHHHHHHhhccCCCCeeEEEeCCCcchH-HHHHhHcCCCeEEE
Q 012735 86 LVPFRDCLAKLLADVEEEPIACLISDAMLPFT-QAVADSLKLPRIVL 131 (457)
Q Consensus 86 ~~~~~~~l~~l~~~~~~~~pDlvi~D~~~~~~-~~~A~~l~iP~v~~ 131 (457)
...+.+.+.++.+. ++|+||..-.+..+ -.+.+.+++|++.+
T Consensus 55 ~~~l~~~~~~l~~~----g~d~iviaCnt~~~l~~lr~~~~iPvigi 97 (245)
T 3qvl_A 55 AVGVLEQIRAGREQ----GVDGHVIASFGDPGLLAARELAQGPVIGI 97 (245)
T ss_dssp HHHHHHHHHHHHHH----TCSEEEEC-CCCTTHHHHHHHCSSCEEEH
T ss_pred HHHHHHHHHHHHHC----CCCEEEEeCCChhHHHHHHHHcCCCEECc
Confidence 11112223333333 88999977665333 44666789999874
No 347
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=27.13 E-value=1.2e+02 Score=25.17 Aligned_cols=33 Identities=18% Similarity=0.310 Sum_probs=23.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCC--eEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGF--TITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh--~Vt~~~~~ 43 (457)
++|+++... | .--..++++|+++|| +|+.+...
T Consensus 19 ~~vlVtGas--g--~iG~~l~~~L~~~G~~~~V~~~~r~ 53 (242)
T 2bka_A 19 KSVFILGAS--G--ETGRVLLKEILEQGLFSKVTLIGRR 53 (242)
T ss_dssp CEEEEECTT--S--HHHHHHHHHHHHHTCCSEEEEEESS
T ss_pred CeEEEECCC--c--HHHHHHHHHHHcCCCCCEEEEEEcC
Confidence 455555432 2 235678999999999 99998764
No 348
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=27.07 E-value=1.3e+02 Score=23.46 Aligned_cols=38 Identities=13% Similarity=0.008 Sum_probs=27.7
Q ss_pred CcEEEEEcCCCcc---CHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQG---HISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~g---H~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
...+++++.|+.+ ...-+..+.++|.+.+.+|.+++..
T Consensus 20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~ 60 (170)
T 2o6l_A 20 ENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDG 60 (170)
T ss_dssp TTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCS
T ss_pred CCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECC
Confidence 3456777777776 4556677888898888888887764
No 349
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=27.05 E-value=71 Score=27.37 Aligned_cols=33 Identities=9% Similarity=0.010 Sum_probs=24.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.|+++++.++.| --.++|++|+++|++|.+...
T Consensus 8 ~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~~ 40 (259)
T 3edm_A 8 NRTIVVAGAGRD---IGRACAIRFAQEGANVVLTYN 40 (259)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 456666665543 457899999999999988754
No 350
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=27.01 E-value=68 Score=27.34 Aligned_cols=34 Identities=9% Similarity=0.047 Sum_probs=24.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.|.++++.++. .--.++|++|+++|++|.++...
T Consensus 22 ~k~vlITGas~---gIG~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 22 SKNILVLGGSG---ALGAEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp CCEEEEETTTS---HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCC---HHHHHHHHHHHHCCCEEEEEeCC
Confidence 34555665553 24578999999999999888764
No 351
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=26.97 E-value=66 Score=28.71 Aligned_cols=34 Identities=15% Similarity=0.132 Sum_probs=21.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.++|++.. +.|. --..|+++|.++||+|+.++.
T Consensus 4 ~~~~vlVTG--atGf--IG~~l~~~L~~~G~~V~~~~r 37 (337)
T 2c29_D 4 QSETVCVTG--ASGF--IGSWLVMRLLERGYTVRATVR 37 (337)
T ss_dssp --CEEEETT--TTSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEEC--CchH--HHHHHHHHHHHCCCEEEEEEC
Confidence 345555443 2232 335789999999999987764
No 352
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=26.96 E-value=54 Score=28.43 Aligned_cols=34 Identities=9% Similarity=0.127 Sum_probs=26.7
Q ss_pred cEEEEEcCCCc--cCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQ--GHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~--gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.+|++++.++- |+ .+.+|+.|..+|++|+++...
T Consensus 86 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCB
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEec
Confidence 48888887653 33 478999999999999998653
No 353
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=26.92 E-value=55 Score=28.18 Aligned_cols=33 Identities=21% Similarity=0.101 Sum_probs=24.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
|+++++.++.| --.++|++|+++|++|.++...
T Consensus 28 k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 60 (260)
T 3gem_A 28 APILITGASQR---VGLHCALRLLEHGHRVIISYRT 60 (260)
T ss_dssp CCEEESSTTSH---HHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 45666665543 4578999999999999988763
No 354
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=26.78 E-value=80 Score=27.74 Aligned_cols=38 Identities=16% Similarity=0.200 Sum_probs=29.9
Q ss_pred cEEEEEc-CCCccCHHHHHHHHHHHHHCCCeEEEEeCCC
Q 012735 7 RRLVLFP-LPLQGHISPMLQLANILHSQGFTITIIHTSF 44 (457)
Q Consensus 7 ~~il~~~-~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~~ 44 (457)
+.|+|.. -++-|-..-...||..|++.|..|.++-...
T Consensus 93 kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 131 (286)
T 3la6_A 93 NVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDM 131 (286)
T ss_dssp CEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCT
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccC
Confidence 3444444 4566999999999999999999999997653
No 355
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=26.70 E-value=64 Score=26.22 Aligned_cols=38 Identities=11% Similarity=0.151 Sum_probs=27.4
Q ss_pred CCcEEEEEcCCCccCHHHHHH-HHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQ-LANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~-la~~L~~~Gh~Vt~~~~~ 43 (457)
+++||+++-.. .|+..-+.. +++.|.+.|++|.++...
T Consensus 3 ~mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~ 41 (199)
T 2zki_A 3 CKPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVR 41 (199)
T ss_dssp CCCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CCcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehh
Confidence 35788877766 888766544 566677789999988653
No 356
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=26.67 E-value=66 Score=28.00 Aligned_cols=33 Identities=15% Similarity=0.106 Sum_probs=24.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.|+++++.++.| --.++|++|+++|++|.++..
T Consensus 24 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 56 (279)
T 3sju_A 24 PQTAFVTGVSSG---IGLAVARTLAARGIAVYGCAR 56 (279)
T ss_dssp -CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 356666666542 567899999999999987765
No 357
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=26.66 E-value=51 Score=28.17 Aligned_cols=32 Identities=13% Similarity=-0.041 Sum_probs=23.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|.++++.++.| --.++|+.|+++|++|.++..
T Consensus 2 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 33 (254)
T 1zmt_A 2 STAIVTNVKHF---GGMGSALRLSEAGHTVACHDE 33 (254)
T ss_dssp CEEEESSTTST---THHHHHHHHHHTTCEEEECCG
T ss_pred eEEEEeCCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 55666655532 246899999999999887654
No 358
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=26.64 E-value=79 Score=25.09 Aligned_cols=29 Identities=17% Similarity=0.158 Sum_probs=23.7
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHhhCC
Q 012735 263 SVIYVSFGSIAAVSEAEFLEIAWGLANCK 291 (457)
Q Consensus 263 ~vv~vs~Gs~~~~~~~~~~~~~~al~~~~ 291 (457)
..+|+++||....+...++..++++...+
T Consensus 5 ~~v~i~LGSNlGd~~~~l~~A~~~L~~~~ 33 (161)
T 3qbc_A 5 IQAYLGLGSNIGDRESQLNDAIKILNEYD 33 (161)
T ss_dssp EEEEEEEEECSSSHHHHHHHHHHHHHHST
T ss_pred cEEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 35999999999777888888888888753
No 359
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=26.63 E-value=1.6e+02 Score=21.30 Aligned_cols=38 Identities=8% Similarity=0.013 Sum_probs=28.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++||++++..|.|--.-.-.+=+.+.++|.++.+-...
T Consensus 3 mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~ 40 (106)
T 1e2b_A 3 KKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFP 40 (106)
T ss_dssp CEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred CcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 45788888776655456668888899999998876654
No 360
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=26.56 E-value=30 Score=30.86 Aligned_cols=33 Identities=6% Similarity=-0.057 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.+.+|+++..+.. -+..|..|+++|++|+++-.
T Consensus 21 ~~~~vvIIG~G~a-----Gl~aA~~l~~~g~~v~vie~ 53 (338)
T 3itj_A 21 VHNKVTIIGSGPA-----AHTAAIYLARAEIKPILYEG 53 (338)
T ss_dssp CEEEEEEECCSHH-----HHHHHHHHHHTTCCCEEECC
T ss_pred CCCCEEEECcCHH-----HHHHHHHHHHCCCCEEEEec
Confidence 3567888876643 47889999999999999876
No 361
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=26.54 E-value=76 Score=27.49 Aligned_cols=34 Identities=12% Similarity=0.089 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.|+++++.++. ---.++|++|+++|++|.++..
T Consensus 10 ~~k~~lVTGas~---GIG~a~a~~la~~G~~V~~~~r 43 (277)
T 3tsc_A 10 EGRVAFITGAAR---GQGRAHAVRMAAEGADIIAVDI 43 (277)
T ss_dssp TTCEEEEESTTS---HHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEECCcc---HHHHHHHHHHHHcCCEEEEEec
Confidence 446667776654 2457899999999999998765
No 362
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=26.53 E-value=74 Score=27.49 Aligned_cols=31 Identities=13% Similarity=0.101 Sum_probs=25.2
Q ss_pred CeeEEEeCCCc------chHHHHHhHcCCCeEEEecc
Q 012735 104 PIACLISDAML------PFTQAVADSLKLPRIVLRTG 134 (457)
Q Consensus 104 ~pDlvi~D~~~------~~~~~~A~~l~iP~v~~~~~ 134 (457)
+||+|++..-. ..+..+|.+||+|++.....
T Consensus 116 ~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~~ 152 (255)
T 1efv_B 116 KVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQ 152 (255)
T ss_dssp TCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred CCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceEE
Confidence 89999987644 26889999999999987654
No 363
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=26.51 E-value=1.3e+02 Score=23.98 Aligned_cols=38 Identities=16% Similarity=0.107 Sum_probs=28.2
Q ss_pred CcEEEEEcCCCccCHHHHHH--HHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQ--LANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~--la~~L~~~Gh~Vt~~~~~ 43 (457)
+...+++..+..|+...+.. +++.|.++|+.|..+-..
T Consensus 31 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 70 (210)
T 1imj_A 31 ARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLP 70 (210)
T ss_dssp CSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCT
T ss_pred CCceEEEECCCCCccceeecchhHHHHHHCCCeEEEecCC
Confidence 34556666666677777777 699999999998777653
No 364
>2a3d_A Protein (de novo three-helix bundle); NMR {Synthetic construct} SCOP: k.9.1.1
Probab=26.48 E-value=78 Score=19.66 Aligned_cols=31 Identities=16% Similarity=0.235 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 012735 412 EEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHI 446 (457)
Q Consensus 412 ~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (457)
..++++...++.++. ..|+++..+..+++.|
T Consensus 5 aefkqrlaaiktrlq----alggseaelaafekei 35 (73)
T 2a3d_A 5 AEFKQRLAAIKTRLQ----ALGGSEAELAAFEKEI 35 (73)
T ss_dssp HHHHHHHHHHHHHHH----HCSSGGGTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH----HhcCcHHHHHHHHHHH
Confidence 357888888888887 6777776666665554
No 365
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=26.46 E-value=48 Score=30.66 Aligned_cols=34 Identities=12% Similarity=0.275 Sum_probs=26.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+..+|+++..+- .-+.+|..|+++|++|+++=..
T Consensus 25 ~~~dV~IVGaG~-----aGl~~A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 25 SDKNVAIIGGGP-----VGLTMAKLLQQNGIDVSVYERD 58 (398)
T ss_dssp TTCEEEEECCSH-----HHHHHHHHHHTTTCEEEEEECS
T ss_pred CCCCEEEECCCH-----HHHHHHHHHHHCCCCEEEEeCC
Confidence 456888887764 3478899999999999998753
No 366
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=26.44 E-value=46 Score=29.16 Aligned_cols=31 Identities=23% Similarity=0.367 Sum_probs=24.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+||.|+..|..| ..+|+.|+++||+|++...
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNR 32 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcC
Confidence 578888766544 5789999999999998765
No 367
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=26.40 E-value=35 Score=30.38 Aligned_cols=33 Identities=21% Similarity=0.223 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
..++|.|+..+..| .++|+.|+++||+|+++..
T Consensus 8 ~~~~IgiIG~G~mG-----~~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 8 FEFDVSVIGLGAMG-----TIMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp CSCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 35789999776555 4789999999999988754
No 368
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=26.36 E-value=75 Score=28.43 Aligned_cols=38 Identities=11% Similarity=0.097 Sum_probs=32.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.+.|.+..=|+-|=..-.+.||.+|+++|++|.++-..
T Consensus 48 aKVIAIaGKGGVGKTTtavNLA~aLA~~GkkVllID~D 85 (314)
T 3fwy_A 48 AKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCD 85 (314)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred ceEEEEECCCccCHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 34566666677799999999999999999999998875
No 369
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=26.33 E-value=74 Score=26.84 Aligned_cols=34 Identities=18% Similarity=0.240 Sum_probs=26.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+.++|+++..| ......++.|.+.|++|+++.+.
T Consensus 30 ~gk~VLVVGgG-----~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGG-----TIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCS-----HHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCC-----HHHHHHHHHHHHCCCEEEEECCC
Confidence 35678877654 45677889999999999999875
No 370
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=26.33 E-value=34 Score=30.80 Aligned_cols=37 Identities=19% Similarity=0.329 Sum_probs=26.8
Q ss_pred CCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 1 MDQRKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 1 ~~~~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|......+|.++..|..|+ .+|..++.+|++|+++-.
T Consensus 1 Ma~p~~~~VaViGaG~MG~-----giA~~~a~~G~~V~l~D~ 37 (319)
T 3ado_A 1 MASPAAGDVLIVGSGLVGR-----SWAMLFASGGFRVKLYDI 37 (319)
T ss_dssp ------CEEEEECCSHHHH-----HHHHHHHHTTCCEEEECS
T ss_pred CCCCCCCeEEEECCcHHHH-----HHHHHHHhCCCeEEEEEC
Confidence 5555678999999988775 688889999999998865
No 371
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=26.32 E-value=62 Score=27.26 Aligned_cols=39 Identities=13% Similarity=0.145 Sum_probs=30.6
Q ss_pred CcE-EEEEc-CCCccCHHHHHHHHHHHHHC-CCeEEEEeCCC
Q 012735 6 GRR-LVLFP-LPLQGHISPMLQLANILHSQ-GFTITIIHTSF 44 (457)
Q Consensus 6 ~~~-il~~~-~~~~gH~~p~l~la~~L~~~-Gh~Vt~~~~~~ 44 (457)
++| |.|+. -++-|-..-...||..|+++ |+.|.++-...
T Consensus 3 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~ 44 (245)
T 3ea0_A 3 AKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISL 44 (245)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 344 44443 45679999999999999999 99999998753
No 372
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=26.28 E-value=73 Score=27.49 Aligned_cols=32 Identities=19% Similarity=0.157 Sum_probs=24.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|.++++.++.| --.++|+.|+++|++|.++..
T Consensus 12 k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 12 PAAVITGGARR---IGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 56667766543 567899999999999998865
No 373
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=26.23 E-value=76 Score=27.79 Aligned_cols=32 Identities=16% Similarity=0.192 Sum_probs=25.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIH 41 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~ 41 (457)
.|+++++.++.| --.++|+.|+++|++|.++.
T Consensus 9 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 9 VPVALVTGAAKR---LGRSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCeEEEEc
Confidence 356677766643 56789999999999999887
No 374
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=26.22 E-value=86 Score=27.62 Aligned_cols=32 Identities=9% Similarity=-0.012 Sum_probs=21.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
++|++....+ .--..|+++|+++||+|+.+..
T Consensus 2 k~vlVTGatG----~iG~~l~~~L~~~G~~V~~~~r 33 (322)
T 2p4h_X 2 GRVCVTGGTG----FLGSWIIKSLLENGYSVNTTIR 33 (322)
T ss_dssp CEEEEESTTS----HHHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEECChh----HHHHHHHHHHHHCCCEEEEEEe
Confidence 4555554333 2346789999999999997764
No 375
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=26.20 E-value=29 Score=32.57 Aligned_cols=35 Identities=17% Similarity=0.336 Sum_probs=26.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 4 RKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+.++||+++.++-.| ..+|+.|.++||+|+++-..
T Consensus 2 ~~~~~viIiG~Gr~G-----~~va~~L~~~g~~vvvId~d 36 (413)
T 3l9w_A 2 SHGMRVIIAGFGRFG-----QITGRLLLSSGVKMVVLDHD 36 (413)
T ss_dssp --CCSEEEECCSHHH-----HHHHHHHHHTTCCEEEEECC
T ss_pred CCCCeEEEECCCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 356789988765434 57899999999999999864
No 376
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=26.17 E-value=46 Score=30.82 Aligned_cols=35 Identities=11% Similarity=0.138 Sum_probs=26.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 4 RKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.++.+|+++..+- .-+.+|..|+++|++|+++=..
T Consensus 21 ~~~~dV~IVGaG~-----aGl~~A~~La~~G~~V~v~E~~ 55 (407)
T 3rp8_A 21 QGHMKAIVIGAGI-----GGLSAAVALKQSGIDCDVYEAV 55 (407)
T ss_dssp --CCEEEEECCSH-----HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEECCCH-----HHHHHHHHHHhCCCCEEEEeCC
Confidence 3457888886653 3588999999999999998653
No 377
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=26.16 E-value=64 Score=28.93 Aligned_cols=33 Identities=12% Similarity=0.101 Sum_probs=26.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+|||+|+..+.++- +..++|.+.||+|..+.+.
T Consensus 2 ~mrivf~Gtp~fa~-----~~L~~L~~~~~~v~~Vvt~ 34 (314)
T 3tqq_A 2 SLKIVFAGTPQFAV-----PTLRALIDSSHRVLAVYTQ 34 (314)
T ss_dssp CCEEEEEECSGGGH-----HHHHHHHHSSSEEEEEECC
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEeC
Confidence 58999999887653 4568888899999887764
No 378
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=25.98 E-value=82 Score=24.97 Aligned_cols=28 Identities=11% Similarity=0.195 Sum_probs=23.6
Q ss_pred EEEEEecccccCCHHHHHHHHHHHhhCC
Q 012735 264 VIYVSFGSIAAVSEAEFLEIAWGLANCK 291 (457)
Q Consensus 264 vv~vs~Gs~~~~~~~~~~~~~~al~~~~ 291 (457)
.+|+++||....+.+.++..+++++..+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQLS 30 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhCC
Confidence 4899999999778888888888888753
No 379
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=25.94 E-value=34 Score=27.53 Aligned_cols=33 Identities=9% Similarity=-0.009 Sum_probs=25.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHC-CCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQ-GFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~-Gh~Vt~~~~~ 43 (457)
+++|+++..+. -...+|+.|.++ ||+|+++...
T Consensus 39 ~~~v~IiG~G~-----~G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 39 HAQVLILGMGR-----IGTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp TCSEEEECCSH-----HHHHHHHHHHHHHCSCEEEEESC
T ss_pred CCcEEEECCCH-----HHHHHHHHHHhccCCeEEEEECC
Confidence 46888885443 345778999999 9999998764
No 380
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=25.92 E-value=78 Score=27.80 Aligned_cols=32 Identities=13% Similarity=0.221 Sum_probs=22.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|+|++.... | .--..|+++|.++||+|+.+..
T Consensus 1 m~vlVTGat--G--~iG~~l~~~L~~~G~~V~~~~r 32 (311)
T 2p5y_A 1 MRVLVTGGA--G--FIGSHIVEDLLARGLEVAVLDN 32 (311)
T ss_dssp CEEEEETTT--S--HHHHHHHHHHHTTTCEEEEECC
T ss_pred CEEEEEeCC--c--HHHHHHHHHHHHCCCEEEEEEC
Confidence 356555433 3 3346789999999999988764
No 381
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=25.84 E-value=70 Score=29.37 Aligned_cols=38 Identities=8% Similarity=-0.012 Sum_probs=30.8
Q ss_pred CcE-EEEEc-CCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRR-LVLFP-LPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~-il~~~-~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++| |+|+. -|+-|-..-...||..|+++|++|.++-..
T Consensus 142 ~~kvIav~s~KGGvGKTT~a~nLA~~La~~g~rVlliD~D 181 (373)
T 3fkq_A 142 KSSVVIFTSPCGGVGTSTVAAACAIAHANMGKKVFYLNIE 181 (373)
T ss_dssp SCEEEEEECSSTTSSHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CceEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 444 45554 567799999999999999999999998864
No 382
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=25.81 E-value=1.1e+02 Score=25.47 Aligned_cols=35 Identities=9% Similarity=-0.091 Sum_probs=25.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHC--CCeEEEEeCC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQ--GFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~--Gh~Vt~~~~~ 43 (457)
++++|+++...+ .--..++++|.++ ||+|+.++..
T Consensus 3 ~~~~ilVtGasG----~iG~~l~~~l~~~~~g~~V~~~~r~ 39 (253)
T 1xq6_A 3 NLPTVLVTGASG----RTGQIVYKKLKEGSDKFVAKGLVRS 39 (253)
T ss_dssp SCCEEEEESTTS----HHHHHHHHHHHHTTTTCEEEEEESC
T ss_pred CCCEEEEEcCCc----HHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 456666664333 3456789999999 8999998763
No 383
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=25.76 E-value=1.1e+02 Score=25.83 Aligned_cols=32 Identities=9% Similarity=0.117 Sum_probs=23.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|.++++.++. .--.+++++|+++|++|.++..
T Consensus 7 k~vlVTGas~---gIG~~ia~~l~~~G~~V~~~~r 38 (246)
T 2ag5_A 7 KVIILTAAAQ---GIGQAAALAFAREGAKVIATDI 38 (246)
T ss_dssp CEEEESSTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCc---HHHHHHHHHHHHCCCEEEEEEC
Confidence 4555555443 3457899999999999998865
No 384
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=25.71 E-value=75 Score=24.31 Aligned_cols=37 Identities=11% Similarity=0.358 Sum_probs=25.7
Q ss_pred cEEEEEcCCCccCHHHH-HHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPM-LQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~-l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+||+++-...+|+..-+ -.|++.|.++|++|.++...
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 36665555556877654 44677888889999988764
No 385
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=25.59 E-value=90 Score=27.67 Aligned_cols=43 Identities=21% Similarity=0.324 Sum_probs=29.2
Q ss_pred CCCCCCcEEEEEcCCCc--cCH-HHHHHHHHHHHHCCCeEEEEeCC
Q 012735 1 MDQRKGRRLVLFPLPLQ--GHI-SPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 1 ~~~~~~~~il~~~~~~~--gH~-~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
|.+.+.+|++++..|.. |.. .-.-.+.+.|.++|.++.+..+.
T Consensus 3 m~~~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~ 48 (304)
T 3s40_A 3 MTKTKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTK 48 (304)
T ss_dssp --CCSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECC
T ss_pred CccCCCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEcc
Confidence 55666778877776644 443 33456778888999999998765
No 386
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=25.54 E-value=90 Score=27.99 Aligned_cols=34 Identities=21% Similarity=0.134 Sum_probs=25.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+++||+|+..+.+ .++..++|.++||+|..+.+.
T Consensus 6 ~~mrivf~Gt~~f-----a~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 6 QSLRIVFAGTPDF-----AARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp -CCEEEEECCSHH-----HHHHHHHHHTSSSEEEEEECC
T ss_pred cCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEcC
Confidence 4789999987743 345568888899999877764
No 387
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=25.54 E-value=89 Score=27.84 Aligned_cols=32 Identities=22% Similarity=0.219 Sum_probs=22.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
++|++.... | .--..|+++|+++||+|+.+..
T Consensus 2 ~~vlVTGat--G--~iG~~l~~~L~~~g~~V~~~~r 33 (347)
T 1orr_A 2 AKLLITGGC--G--FLGSNLASFALSQGIDLIVFDN 33 (347)
T ss_dssp CEEEEETTT--S--HHHHHHHHHHHHTTCEEEEEEC
T ss_pred cEEEEeCCC--c--hhHHHHHHHHHhCCCEEEEEeC
Confidence 456655433 3 3346789999999999999864
No 388
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=25.52 E-value=92 Score=26.68 Aligned_cols=39 Identities=10% Similarity=0.177 Sum_probs=26.1
Q ss_pred CCCcEEEEEcCCCc--cCHHHHHH-HHHHHHHCCCeEEEEeC
Q 012735 4 RKGRRLVLFPLPLQ--GHISPMLQ-LANILHSQGFTITIIHT 42 (457)
Q Consensus 4 ~~~~~il~~~~~~~--gH~~p~l~-la~~L~~~Gh~Vt~~~~ 42 (457)
..++||+++..... |...-++. +++.|.+.|++|.++--
T Consensus 32 ~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 32 THRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp CSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 34678877765543 55555444 56777778999988765
No 389
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=25.48 E-value=76 Score=27.57 Aligned_cols=33 Identities=12% Similarity=0.142 Sum_probs=24.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.|+++++.++.| --.++|++|+++|++|.++..
T Consensus 27 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r 59 (277)
T 4dqx_A 27 QRVCIVTGGGSG---IGRATAELFAKNGAYVVVADV 59 (277)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 356666665542 467899999999999988765
No 390
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=25.48 E-value=31 Score=26.50 Aligned_cols=48 Identities=10% Similarity=0.122 Sum_probs=30.7
Q ss_pred hCCcccccCccchhhHHHHHHHhhhc-cceecCCCCCHHHHHHHHHHHhcc
Q 012735 359 EGIPMICMPCFTDQKVNARYVSDVWK-VGLQLENGLKREEIEKTIRRVMVE 408 (457)
Q Consensus 359 ~gvP~v~~P~~~DQ~~na~~v~~~lG-~g~~l~~~~~~~~l~~ai~~il~~ 408 (457)
..+|+|++--..+. .......+ .| +--.+.+.++.+.|..+|++++..
T Consensus 78 ~~~~ii~ls~~~~~-~~~~~~~~-~g~~~~~l~kP~~~~~L~~~i~~~~~~ 126 (154)
T 2rjn_A 78 PDIERVVISGYADA-QATIDAVN-RGKISRFLLKPWEDEDVFKVVEKGLQL 126 (154)
T ss_dssp TTSEEEEEECGGGH-HHHHHHHH-TTCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCCH-HHHHHHHh-ccchheeeeCCCCHHHHHHHHHHHHHH
Confidence 36777776544443 33333334 25 544454568999999999999976
No 391
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=25.46 E-value=70 Score=27.50 Aligned_cols=37 Identities=11% Similarity=0.160 Sum_probs=27.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
...+++..+..|+..-...+++.|.++|++|..+-.+
T Consensus 46 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 82 (315)
T 4f0j_A 46 GRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQV 82 (315)
T ss_dssp SCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecC
Confidence 3444555555566667889999999999999887764
No 392
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=25.44 E-value=62 Score=28.18 Aligned_cols=33 Identities=24% Similarity=0.198 Sum_probs=26.4
Q ss_pred cEEEEEcCCCc--cCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQ--GHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~--gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.+|++++.++- |+ .+.+|+.|..+|++|+++..
T Consensus 80 ~~VlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~ 114 (265)
T 2o8n_A 80 PTVLVICGPGNNGGD---GLVCARHLKLFGYQPTIYYP 114 (265)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEe
Confidence 48888887653 33 47899999999999999865
No 393
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=25.43 E-value=79 Score=26.92 Aligned_cols=33 Identities=15% Similarity=0.123 Sum_probs=24.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.|+++++.++. .--.++|++|+++|++|.++..
T Consensus 12 ~k~vlVTGas~---gIG~aia~~l~~~G~~V~~~~r 44 (252)
T 3f1l_A 12 DRIILVTGASD---GIGREAAMTYARYGATVILLGR 44 (252)
T ss_dssp TCEEEEESTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCC---hHHHHHHHHHHHCCCEEEEEeC
Confidence 45667766654 2457899999999999988765
No 394
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=25.36 E-value=49 Score=29.01 Aligned_cols=31 Identities=23% Similarity=0.357 Sum_probs=25.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+||.|+..|..|. .+|+.|+++||+|+++..
T Consensus 2 ~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~dr 32 (287)
T 3pdu_A 2 TTYGFLGLGIMGG-----PMAANLVRAGFDVTVWNR 32 (287)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHHTCCEEEECS
T ss_pred CeEEEEccCHHHH-----HHHHHHHHCCCeEEEEcC
Confidence 4788988777664 578999999999998765
No 395
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=25.34 E-value=78 Score=26.43 Aligned_cols=36 Identities=11% Similarity=0.131 Sum_probs=29.2
Q ss_pred EEEEEc-CCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 8 RLVLFP-LPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 8 ~il~~~-~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.|.|+. -++-|-..-...||..|+++|++|.++-..
T Consensus 4 ~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (237)
T 1g3q_A 4 IISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp EEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 444444 456699999999999999999999998765
No 396
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=25.30 E-value=2.5e+02 Score=22.11 Aligned_cols=35 Identities=11% Similarity=0.065 Sum_probs=26.3
Q ss_pred CCcEEEEEcCC--CccC-HHHHHHHHHHHHHCCCeEEE
Q 012735 5 KGRRLVLFPLP--LQGH-ISPMLQLANILHSQGFTITI 39 (457)
Q Consensus 5 ~~~~il~~~~~--~~gH-~~p~l~la~~L~~~Gh~Vt~ 39 (457)
..+++.++..+ ..+. ..-.-.+.+.|.+.|.+|.+
T Consensus 8 ~~~~~~y~a~~~F~~~e~~~~~~~l~~~l~~~G~~v~~ 45 (161)
T 2f62_A 8 HMRKIYIAGPAVFNPDMGASYYNKVRELLKKENVMPLI 45 (161)
T ss_dssp CCCEEEEESGGGGSTTTTHHHHHHHHHHHHTTTCEEEC
T ss_pred hhhceEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEC
Confidence 34566666655 4488 88899999999999998644
No 397
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=25.12 E-value=62 Score=28.31 Aligned_cols=32 Identities=19% Similarity=0.197 Sum_probs=25.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.+||.|+..|..| ..+|+.|+++||+|+++..
T Consensus 4 ~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 4 ITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 4689998665544 5789999999999988755
No 398
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=25.06 E-value=84 Score=27.07 Aligned_cols=32 Identities=25% Similarity=0.225 Sum_probs=24.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|.++++.++.| --.++|++|+++|++|.++..
T Consensus 30 k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r 61 (271)
T 4iin_A 30 KNVLITGASKG---IGAEIAKTLASMGLKVWINYR 61 (271)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 45666665543 467899999999999988776
No 399
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=25.06 E-value=3.6e+02 Score=23.85 Aligned_cols=109 Identities=11% Similarity=0.102 Sum_probs=54.9
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHhhC-CCCeEEEECCCCCCCCCCCCCCchhHHHhhcCCCcc-ccccChHhhhcCCC
Q 012735 263 SVIYVSFGSIAAVSEAEFLEIAWGLANC-KLPFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHL-VKWAPQQEVLAHPA 340 (457)
Q Consensus 263 ~vv~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~-~~~vpq~~lL~~~~ 340 (457)
++.+|..|.++. .++.++.+. +.+++.++.... .-.+.+.++. -+ ..+-...++|..++
T Consensus 7 ~igiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~~--------~~~~~~~~~~----~~~~~~~~~~~ll~~~~ 67 (330)
T 3e9m_A 7 RYGIMSTAQIVP-------RFVAGLRESAQAEVRGIASRRL--------ENAQKMAKEL----AIPVAYGSYEELCKDET 67 (330)
T ss_dssp EEEECSCCTTHH-------HHHHHHHHSSSEEEEEEBCSSS--------HHHHHHHHHT----TCCCCBSSHHHHHHCTT
T ss_pred EEEEECchHHHH-------HHHHHHHhCCCcEEEEEEeCCH--------HHHHHHHHHc----CCCceeCCHHHHhcCCC
Confidence 577788887763 245566654 334444443211 0111222222 12 23455678888666
Q ss_pred CCCcccccCh----hHHHHHHhhCCcccc-cCcc--chhhH-HHHHHHhhhccceecCC
Q 012735 341 VGAFWTHNGW----NSTLESICEGIPMIC-MPCF--TDQKV-NARYVSDVWKVGLQLEN 391 (457)
Q Consensus 341 ~~~~I~hgG~----~s~~eal~~gvP~v~-~P~~--~DQ~~-na~~v~~~lG~g~~l~~ 391 (457)
+.+++----. ..+.+|+.+|+++++ -|+. .++.. ..+..++. |+-+....
T Consensus 68 ~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~-g~~~~v~~ 125 (330)
T 3e9m_A 68 IDIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQ-GVFLMEAQ 125 (330)
T ss_dssp CSEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHT-TCCEEECC
T ss_pred CCEEEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHc-CCeEEEEE
Confidence 5556644333 346778889998876 2543 23322 23334443 65444443
No 400
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=25.05 E-value=54 Score=28.21 Aligned_cols=33 Identities=18% Similarity=0.247 Sum_probs=26.4
Q ss_pred cEEEEEcCCCc--cCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQ--GHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~--gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.+|++++.++- |+ .+.+|+.|..+|++|+++..
T Consensus 59 ~~v~VlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~ 93 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGD---GLVCARHLKLFGYNPVVFYP 93 (246)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCCEEEECC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEc
Confidence 58888887653 33 47889999999999999865
No 401
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=25.04 E-value=2e+02 Score=22.82 Aligned_cols=54 Identities=2% Similarity=-0.002 Sum_probs=34.8
Q ss_pred HHHHHh---hCCcccccCccchhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHhcc
Q 012735 353 TLESIC---EGIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVMVE 408 (457)
Q Consensus 353 ~~eal~---~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~~ 408 (457)
+.+.+. ..+|+|++--..| .......-+ .|+---+.+.++.+.|..+|+.++..
T Consensus 69 l~~~~~~~~~~~~ii~lt~~~~-~~~~~~a~~-~ga~~~l~KP~~~~~L~~~l~~~~~~ 125 (196)
T 1qo0_D 69 IAALLAAGTPRTTLVALVEYES-PAVLSQIIE-LECHGVITQPLDAHRVLPVLVSARRI 125 (196)
T ss_dssp HHHHHHHSCTTCEEEEEECCCS-HHHHHHHHH-HTCSEEEESSCCGGGHHHHHHHHHHH
T ss_pred HHHHHhccCCCCCEEEEEcCCC-hHHHHHHHH-cCCCeeEecCcCHHHHHHHHHHHHHH
Confidence 444444 3577776654444 344555555 37755555568999999999988865
No 402
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=25.04 E-value=24 Score=31.48 Aligned_cols=33 Identities=15% Similarity=-0.012 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
..+|+++..+..| +..|..|+++|++|+++-..
T Consensus 7 ~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~ 39 (332)
T 3lzw_A 7 VYDITIIGGGPVG-----LFTAFYGGMRQASVKIIESL 39 (332)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred cceEEEECCCHHH-----HHHHHHHHHCCCCEEEEEcC
Confidence 4578888776544 78889999999999999764
No 403
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=25.02 E-value=48 Score=29.13 Aligned_cols=34 Identities=9% Similarity=0.082 Sum_probs=23.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+++|+++. +.|.+ -..|+++|.++||+|+.++..
T Consensus 2 ~~~vlVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 35 (307)
T 2gas_A 2 ENKILILG--PTGAI--GRHIVWASIKAGNPTYALVRK 35 (307)
T ss_dssp CCCEEEES--TTSTT--HHHHHHHHHHHTCCEEEEECC
T ss_pred CcEEEEEC--CCchH--HHHHHHHHHhCCCcEEEEECC
Confidence 35666654 33433 346889999999999988764
No 404
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=25.02 E-value=68 Score=30.22 Aligned_cols=31 Identities=23% Similarity=0.349 Sum_probs=24.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|||.++..|..| ..+|..|+++||+|+++..
T Consensus 1 mkI~VIG~G~vG-----~~~A~~la~~G~~V~~~d~ 31 (436)
T 1mv8_A 1 MRISIFGLGYVG-----AVCAGCLSARGHEVIGVDV 31 (436)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 478888765555 5788899999999998865
No 405
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=24.95 E-value=1e+02 Score=26.26 Aligned_cols=35 Identities=11% Similarity=0.115 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+.|+++++.++. .--.++|++|+++|++|.++...
T Consensus 6 ~~k~~lVTGas~---gIG~aia~~l~~~G~~V~~~~r~ 40 (257)
T 3tpc_A 6 KSRVFIVTGASS---GLGAAVTRMLAQEGATVLGLDLK 40 (257)
T ss_dssp TTCEEEEESTTS---HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeCCCC---HHHHHHHHHHHHCCCEEEEEeCC
Confidence 345666666553 34578999999999999887753
No 406
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=24.92 E-value=46 Score=30.15 Aligned_cols=37 Identities=5% Similarity=0.058 Sum_probs=26.9
Q ss_pred CcEEEEEcCCCccCHH----HHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHIS----PMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~----p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|+||+++..+..+-.. ....++++|.+.||+|..+..
T Consensus 3 ~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (343)
T 1e4e_A 3 RIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGI 43 (343)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEE
Confidence 6788888755333222 466789999999999998765
No 407
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=24.90 E-value=1.1e+02 Score=26.19 Aligned_cols=32 Identities=16% Similarity=0.156 Sum_probs=24.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|+++++.++.| --.++|++|+++|++|.++..
T Consensus 30 k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r 61 (262)
T 3rkr_A 30 QVAVVTGASRG---IGAAIARKLGSLGARVVLTAR 61 (262)
T ss_dssp CEEEESSTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCh---HHHHHHHHHHHCCCEEEEEEC
Confidence 56666665542 567889999999999888765
No 408
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=24.86 E-value=21 Score=31.65 Aligned_cols=32 Identities=16% Similarity=0.070 Sum_probs=26.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+||+|+..|+.|- .+|..|.+.||+|+++...
T Consensus 3 mkI~iiGaGa~G~-----~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGT-----TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHH-----HHHHHHHHHCTTCEEEESS
T ss_pred cEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEec
Confidence 6899998877664 6788999999999999874
No 409
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=24.83 E-value=1e+02 Score=25.77 Aligned_cols=38 Identities=13% Similarity=0.157 Sum_probs=27.7
Q ss_pred CcEEEEEcCCCccC--HHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGH--ISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH--~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+...+++..+..|+ ..-+..+++.|.++|+.|..+-.+
T Consensus 26 ~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 65 (251)
T 2wtm_A 26 KCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMY 65 (251)
T ss_dssp SEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CCCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCC
Confidence 33455666666676 667788999999999998776553
No 410
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=24.79 E-value=79 Score=27.70 Aligned_cols=34 Identities=18% Similarity=0.075 Sum_probs=25.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.|+++++.++.| --.++|++|+++|++|.++...
T Consensus 47 gk~vlVTGas~G---IG~aia~~la~~G~~V~~~~r~ 80 (291)
T 3ijr_A 47 GKNVLITGGDSG---IGRAVSIAFAKEGANIAIAYLD 80 (291)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 356666666543 4578999999999999887653
No 411
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=24.72 E-value=86 Score=26.54 Aligned_cols=33 Identities=18% Similarity=0.153 Sum_probs=25.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.|+++++.++.| --.++|++|+++|++|.++..
T Consensus 7 ~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~ 39 (255)
T 3icc_A 7 GKVALVTGASRG---IGRAIAKRLANDGALVAIHYG 39 (255)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCeEEEEeC
Confidence 466777776654 567899999999999988755
No 412
>2gez_A L-asparaginase alpha subunit; isoaspartyl aminopeptidase, NTN-hydrolase, autoproteolysis, taspase, sodium binding, hydrolase; 2.60A {Lupinus luteus}
Probab=24.71 E-value=1.5e+02 Score=24.34 Aligned_cols=22 Identities=14% Similarity=0.415 Sum_probs=19.7
Q ss_pred cCCChHHHHHHHHHHHHhcccc
Q 012735 431 QGRSSFESINSLVTHILSLETF 452 (457)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~ 452 (457)
.+++.-++++..+..+|....|
T Consensus 47 ~G~sAlDAV~~av~~lEd~p~f 68 (195)
T 2gez_A 47 AQKPPLDVVELVVRELENIEHF 68 (195)
T ss_dssp TTCCHHHHHHHHHHHHHHCTTS
T ss_pred cCCCHHHHHHHHHHHHhcCCCC
Confidence 7899999999999999988754
No 413
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=24.67 E-value=34 Score=30.27 Aligned_cols=39 Identities=13% Similarity=0.103 Sum_probs=29.0
Q ss_pred CCcEEEEEcCCCcc-C---HHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFPLPLQG-H---ISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~g-H---~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.+|||+++..+-.+ | +.-...++++|.++||+|..+...
T Consensus 2 ~~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (307)
T 3r5x_A 2 NAMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLN 44 (307)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECS
T ss_pred CCcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 47899888866432 1 344668899999999999988763
No 414
>1k2x_A Putative L-asparaginase; NTN hydrolase, asparginase, autoproteolysis, hydrolase; HET: CME; 1.65A {Escherichia coli} SCOP: d.153.1.5 PDB: 1jn9_A* 1t3m_A 2zal_A
Probab=24.67 E-value=1.5e+02 Score=23.82 Aligned_cols=23 Identities=17% Similarity=0.332 Sum_probs=20.2
Q ss_pred hcCCChHHHHHHHHHHHHhcccc
Q 012735 430 KQGRSSFESINSLVTHILSLETF 452 (457)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~ 452 (457)
+.+++.-++++..+..+|....|
T Consensus 43 ~~g~saldAV~~av~~lEd~p~f 65 (177)
T 1k2x_A 43 EAGESALDVVTEAVRLLEECPLF 65 (177)
T ss_dssp HTTCCHHHHHHHHHHHHHHCTTS
T ss_pred HcCCCHHHHHHHHHHHHhcCCCC
Confidence 37899999999999999988854
No 415
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=24.67 E-value=81 Score=26.95 Aligned_cols=32 Identities=22% Similarity=0.227 Sum_probs=23.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|.++++.++.| --.++|+.|+++|++|.++..
T Consensus 5 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 36 (260)
T 1x1t_A 5 KVAVVTGSTSG---IGLGIATALAAQGADIVLNGF 36 (260)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHcCCEEEEEeC
Confidence 45666655532 467899999999999988754
No 416
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=24.64 E-value=1e+02 Score=28.22 Aligned_cols=33 Identities=12% Similarity=0.164 Sum_probs=23.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHH-HCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILH-SQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~-~~Gh~Vt~~~~ 42 (457)
.|+|++.... |. --..|++.|+ ++||+|+.+..
T Consensus 2 ~m~vlVTGat--G~--iG~~l~~~L~~~~g~~V~~~~r 35 (397)
T 1gy8_A 2 HMRVLVCGGA--GY--IGSHFVRALLRDTNHSVVIVDS 35 (397)
T ss_dssp CCEEEEETTT--SH--HHHHHHHHHHHHCCCEEEEEEC
T ss_pred CCEEEEECCC--CH--HHHHHHHHHHHhCCCEEEEEec
Confidence 4677666433 33 3467899999 99999999875
No 417
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=24.62 E-value=62 Score=27.61 Aligned_cols=29 Identities=7% Similarity=0.054 Sum_probs=20.3
Q ss_pred CeeEEEeCCCcc--hHHHHHhHcCCCeEEEe
Q 012735 104 PIACLISDAMLP--FTQAVADSLKLPRIVLR 132 (457)
Q Consensus 104 ~pDlvi~D~~~~--~~~~~A~~l~iP~v~~~ 132 (457)
+||+||...... -...--+..|||++.+.
T Consensus 59 ~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 59 KPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp CCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 999999886542 22333456789999874
No 418
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=24.61 E-value=92 Score=26.80 Aligned_cols=33 Identities=15% Similarity=0.161 Sum_probs=24.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.|+++++.++. .--.++|+.|+++|++|.++..
T Consensus 21 ~k~~lVTGas~---gIG~~ia~~l~~~G~~V~~~~r 53 (267)
T 1vl8_A 21 GRVALVTGGSR---GLGFGIAQGLAEAGCSVVVASR 53 (267)
T ss_dssp TCEEEEETTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCC---HHHHHHHHHHHHCCCEEEEEeC
Confidence 45666665543 3467899999999999988765
No 419
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=24.56 E-value=87 Score=26.73 Aligned_cols=34 Identities=9% Similarity=-0.080 Sum_probs=23.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHH-CCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHS-QGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~-~Gh~Vt~~~~~ 43 (457)
.|.++++.++ | .--.++++.|++ +|++|.++...
T Consensus 4 ~k~vlITGas-g--gIG~~~a~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 4 IHVALVTGGN-K--GIGLAIVRDLCRLFSGDVVLTARD 38 (276)
T ss_dssp CCEEEESSCS-S--HHHHHHHHHHHHHSSSEEEEEESS
T ss_pred CCEEEEeCCC-c--HHHHHHHHHHHHhcCCeEEEEeCC
Confidence 3455555444 3 245688999999 99999988753
No 420
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=24.54 E-value=88 Score=27.14 Aligned_cols=34 Identities=18% Similarity=0.025 Sum_probs=24.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.|+++++.++. .--.++|++|+++|++|.++..
T Consensus 10 ~~k~vlVTGas~---gIG~aia~~l~~~G~~V~~~~r 43 (281)
T 3svt_A 10 QDRTYLVTGGGS---GIGKGVAAGLVAAGASVMIVGR 43 (281)
T ss_dssp TTCEEEEETTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCc---HHHHHHHHHHHHCCCEEEEEeC
Confidence 345666665553 2456899999999999988764
No 421
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=24.52 E-value=1.2e+02 Score=25.95 Aligned_cols=36 Identities=17% Similarity=0.095 Sum_probs=23.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.|.++++.++. -----.++|++|+++|++|.+...
T Consensus 6 ~~k~vlVTGasg-~~GIG~~ia~~l~~~G~~V~~~~r 41 (266)
T 3oig_A 6 EGRNIVVMGVAN-KRSIAWGIARSLHEAGARLIFTYA 41 (266)
T ss_dssp TTCEEEEECCCS-TTSHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEEcCCC-CCcHHHHHHHHHHHCCCEEEEecC
Confidence 345555555441 101356899999999999988764
No 422
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=24.51 E-value=42 Score=31.93 Aligned_cols=35 Identities=14% Similarity=0.182 Sum_probs=27.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 4 RKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.++++|+++..+.. -+..|..|+++||+|+++-..
T Consensus 120 ~~~~~V~IIGgGpA-----Gl~aA~~L~~~G~~V~v~e~~ 154 (456)
T 2vdc_G 120 ELGLSVGVIGAGPA-----GLAAAEELRAKGYEVHVYDRY 154 (456)
T ss_dssp SCCCCEEEECCSHH-----HHHHHHHHHHHTCCEEEECSS
T ss_pred CCCCEEEEECCCHH-----HHHHHHHHHHCCCeEEEEecc
Confidence 35678888877643 478888999999999998764
No 423
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=24.51 E-value=2e+02 Score=20.59 Aligned_cols=46 Identities=7% Similarity=0.165 Sum_probs=31.7
Q ss_pred CCcccccCccchhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHhc
Q 012735 360 GIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVMV 407 (457)
Q Consensus 360 gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~ 407 (457)
.+|+|++--..+ .....+..+ .|+---+.+.++.++|.++|+++++
T Consensus 76 ~~pii~~s~~~~-~~~~~~~~~-~Ga~~~l~KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 76 RIPVIVLTAKGG-EEDESLALS-LGARKVMRKPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp TSCEEEEESCCS-HHHHHHHHH-TTCSEEEESSCCHHHHHHHHHHHHC
T ss_pred CCCEEEEecCCc-hHHHHHHHh-cChhhhccCCCCHHHHHHHHHHHhc
Confidence 577776654433 344455555 3776666667899999999998875
No 424
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=24.46 E-value=1e+02 Score=27.74 Aligned_cols=33 Identities=9% Similarity=0.074 Sum_probs=23.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++||+|+. --+....+.++|.+.||+|..+.+.
T Consensus 22 ~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt~ 54 (329)
T 2bw0_A 22 SMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFTV 54 (329)
T ss_dssp CCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEeC
Confidence 48999983 2234445779999999999876653
No 425
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=24.43 E-value=75 Score=27.40 Aligned_cols=31 Identities=13% Similarity=0.086 Sum_probs=25.2
Q ss_pred CeeEEEeCCCc------chHHHHHhHcCCCeEEEecc
Q 012735 104 PIACLISDAML------PFTQAVADSLKLPRIVLRTG 134 (457)
Q Consensus 104 ~pDlvi~D~~~------~~~~~~A~~l~iP~v~~~~~ 134 (457)
+||+|++..-. ..+..+|.+||+|++.....
T Consensus 113 ~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 149 (252)
T 1efp_B 113 GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASK 149 (252)
T ss_dssp TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEE
T ss_pred CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEEE
Confidence 89999987644 26889999999999987654
No 426
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=24.43 E-value=60 Score=28.51 Aligned_cols=34 Identities=18% Similarity=0.206 Sum_probs=23.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+++|+++... |.+ -..|+++|.++||+|+.++..
T Consensus 4 ~~~ilVtGat--G~i--G~~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 4 RSRILLIGAT--GYI--GRHVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp CCCEEEESTT--STT--HHHHHHHHHHTTCCEEEECCC
T ss_pred CCEEEEEcCC--cHH--HHHHHHHHHhCCCCEEEEECC
Confidence 4567666532 333 346889999999999987764
No 427
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=24.42 E-value=48 Score=29.69 Aligned_cols=33 Identities=6% Similarity=0.015 Sum_probs=26.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCC-CeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQG-FTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~G-h~Vt~~~~~ 43 (457)
.++|.|+..|..| .++|+.|++.| |+|+++...
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECGG
T ss_pred CCeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeCC
Confidence 3689999877655 78899999999 999987653
No 428
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=24.41 E-value=42 Score=31.01 Aligned_cols=34 Identities=15% Similarity=0.212 Sum_probs=26.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+..+|+++..+-. -+.+|..|+++|++|+++-..
T Consensus 5 ~~~dVvIVGaG~a-----Gl~~A~~L~~~G~~V~viE~~ 38 (399)
T 2x3n_A 5 NHIDVLINGCGIG-----GAMLAYLLGRQGHRVVVVEQA 38 (399)
T ss_dssp CEEEEEEECCSHH-----HHHHHHHHHHTTCCEEEECSS
T ss_pred CcCCEEEECcCHH-----HHHHHHHHHhCCCcEEEEeCC
Confidence 4567888877643 478899999999999998653
No 429
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=24.38 E-value=1.4e+02 Score=26.90 Aligned_cols=71 Identities=8% Similarity=0.131 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHHhhCCCCeEEEECCCCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCCCCCcccccChhHHHH
Q 012735 276 SEAEFLEIAWGLANCKLPFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPAVGAFWTHNGWNSTLE 355 (457)
Q Consensus 276 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~~~~~I~hgG~~s~~e 355 (457)
+.+....+.+++.+...+.||...++. .-. ++.++++...+-++|+. ||-..-..++.-
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~-----------g~~--------rlL~~LD~~~i~~~PK~--~~GySDiT~L~~ 121 (327)
T 4h1h_A 63 IRSRVADIHEAFNDSSVKAILTVIGGF-----------NSN--------QLLPYLDYDLISENPKI--LCGFSDITALAT 121 (327)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCS-----------CGG--------GGGGGCCHHHHHHSCCE--EEECTTHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCch-----------hHH--------HHhhhcchhhhccCCeE--EEecccccHHHH
Confidence 456677788888887788888877663 111 56677777777777877 887777777777
Q ss_pred HHh--hCCcccccC
Q 012735 356 SIC--EGIPMICMP 367 (457)
Q Consensus 356 al~--~gvP~v~~P 367 (457)
+++ .|+..+.=|
T Consensus 122 al~~~~g~~t~hGp 135 (327)
T 4h1h_A 122 AIYTQTELITYSGA 135 (327)
T ss_dssp HHHHHHCBCEEECC
T ss_pred HHHHhcCeEEEeCc
Confidence 765 344444333
No 430
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=24.38 E-value=1.1e+02 Score=25.81 Aligned_cols=23 Identities=22% Similarity=0.213 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHCCCeEEEEeCC
Q 012735 21 SPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 21 ~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.--..++++|+++||+|+.+...
T Consensus 12 ~iG~~l~~~L~~~g~~V~~~~r~ 34 (255)
T 2dkn_A 12 GIGAALKELLARAGHTVIGIDRG 34 (255)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHHhCCCEEEEEeCC
Confidence 34567899999999999988763
No 431
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=24.37 E-value=1.3e+02 Score=25.59 Aligned_cols=33 Identities=15% Similarity=0.108 Sum_probs=23.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.|.++++.++. .--.++|++|+++|++|.++..
T Consensus 8 ~k~vlVTGas~---gIG~~ia~~l~~~G~~V~~~~r 40 (259)
T 4e6p_A 8 GKSALITGSAR---GIGRAFAEAYVREGATVAIADI 40 (259)
T ss_dssp TCEEEEETCSS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCc---HHHHHHHHHHHHCCCEEEEEeC
Confidence 34555555443 3456899999999999988765
No 432
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=24.37 E-value=88 Score=26.90 Aligned_cols=33 Identities=12% Similarity=0.144 Sum_probs=25.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.|+++++.++.| --.++|+.|+++|++|.++..
T Consensus 20 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 52 (266)
T 4egf_A 20 GKRALITGATKG---IGADIARAFAAAGARLVLSGR 52 (266)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 356777766643 457899999999999988765
No 433
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=24.35 E-value=1.8e+02 Score=26.16 Aligned_cols=126 Identities=15% Similarity=0.109 Sum_probs=0.0
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHhhC--CCCeEEEECCCCCCCCCCCCCCchhHHHhhcCCCccccccChHhhhcCCC
Q 012735 263 SVIYVSFGSIAAVSEAEFLEIAWGLANC--KLPFLWVVRPGLTRGSDCLEPLPSGFMEMVDGRGHLVKWAPQQEVLAHPA 340 (457)
Q Consensus 263 ~vv~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~vpq~~lL~~~~ 340 (457)
++.+|..|.++ ...+.++.+. +.+++.++... +.-.+.+.+..-+..+-...++|..++
T Consensus 15 rvgiiG~G~~g-------~~~~~~l~~~~~~~~lvav~d~~------------~~~~~~~~~~~~~~~~~~~~~ll~~~~ 75 (354)
T 3q2i_A 15 RFALVGCGRIA-------NNHFGALEKHADRAELIDVCDID------------PAALKAAVERTGARGHASLTDMLAQTD 75 (354)
T ss_dssp EEEEECCSTTH-------HHHHHHHHHTTTTEEEEEEECSS------------HHHHHHHHHHHCCEEESCHHHHHHHCC
T ss_pred eEEEEcCcHHH-------HHHHHHHHhCCCCeEEEEEEcCC------------HHHHHHHHHHcCCceeCCHHHHhcCCC
Q ss_pred CCCcc----cccChhHHHHHHhhCCcccc----cCccchhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHhcc
Q 012735 341 VGAFW----THNGWNSTLESICEGIPMIC----MPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVMVE 408 (457)
Q Consensus 341 ~~~~I----~hgG~~s~~eal~~gvP~v~----~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~~ 408 (457)
+.+++ ++--...+.+++.+|+++++ .....|-....+..++. |+-+.+.....-.-....+++++.+
T Consensus 76 ~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~-g~~~~v~~~~r~~p~~~~~k~~i~~ 150 (354)
T 3q2i_A 76 ADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKA-KKHLFVVKQNRRNATLQLLKRAMQE 150 (354)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHH-TCCEEECCGGGGSHHHHHHHHHHHT
T ss_pred CCEEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHh-CCeEEEEEcccCCHHHHHHHHHHhc
No 434
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=24.31 E-value=90 Score=26.90 Aligned_cols=33 Identities=24% Similarity=0.210 Sum_probs=24.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.|+++++.++.| --.++|++|+++|++|.+...
T Consensus 27 gk~vlVTGas~g---IG~aia~~la~~G~~V~~~~r 59 (266)
T 3grp_A 27 GRKALVTGATGG---IGEAIARCFHAQGAIVGLHGT 59 (266)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 356666666543 457899999999999988765
No 435
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=24.28 E-value=91 Score=26.44 Aligned_cols=33 Identities=15% Similarity=0.127 Sum_probs=25.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.|+++++.++. .--.++|++|+++|++|.+...
T Consensus 9 gk~~lVTGas~---gIG~a~a~~l~~~G~~V~~~~r 41 (248)
T 3op4_A 9 GKVALVTGASR---GIGKAIAELLAERGAKVIGTAT 41 (248)
T ss_dssp TCEEEESSCSS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCC---HHHHHHHHHHHHCCCEEEEEeC
Confidence 46677776654 2457899999999999988765
No 436
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=24.28 E-value=1.1e+02 Score=21.70 Aligned_cols=33 Identities=6% Similarity=0.019 Sum_probs=23.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
...|++++..+ ......++.|.+.|++|.++..
T Consensus 56 ~~~iv~yC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (103)
T 3eme_A 56 NEIYYIVCAGG----VRSAKVVEYLEANGIDAVNVEG 88 (103)
T ss_dssp TSEEEEECSSS----SHHHHHHHHHHTTTCEEEEETT
T ss_pred CCeEEEECCCC----hHHHHHHHHHHHCCCCeEEeCC
Confidence 35677777543 2456678899999999887764
No 437
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=24.18 E-value=91 Score=26.63 Aligned_cols=32 Identities=16% Similarity=0.048 Sum_probs=24.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|+++++.++. .--.++|++|+++|++|.++..
T Consensus 6 k~vlVTGas~---gIG~~ia~~l~~~G~~V~~~~r 37 (260)
T 2qq5_A 6 QVCVVTGASR---GIGRGIALQLCKAGATVYITGR 37 (260)
T ss_dssp CEEEESSTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCc---hHHHHHHHHHHHCCCEEEEEeC
Confidence 5666666553 2456899999999999988764
No 438
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=24.17 E-value=56 Score=29.95 Aligned_cols=32 Identities=13% Similarity=0.197 Sum_probs=25.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+++|.|+..+..| ..+|+.|+++||+|+++..
T Consensus 22 ~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr 53 (358)
T 4e21_A 22 SMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDL 53 (358)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 4789999766544 5789999999999998865
No 439
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=24.15 E-value=83 Score=30.13 Aligned_cols=34 Identities=9% Similarity=0.193 Sum_probs=28.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHC-CC-eEEEEeCC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQ-GF-TITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~-Gh-~Vt~~~~~ 43 (457)
+.+||.|+..|..| +++|..|+++ || +|+++...
T Consensus 17 ~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~ 52 (478)
T 3g79_A 17 PIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRN 52 (478)
T ss_dssp SCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCC
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECC
Confidence 45799999888777 5789999999 99 99998764
No 440
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=24.12 E-value=85 Score=26.41 Aligned_cols=32 Identities=9% Similarity=0.029 Sum_probs=23.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|.++++.++. .--.++|++|+++|++|.++..
T Consensus 4 k~vlVTGas~---GIG~a~a~~l~~~G~~V~~~~r 35 (235)
T 3l6e_A 4 GHIIVTGAGS---GLGRALTIGLVERGHQVSMMGR 35 (235)
T ss_dssp CEEEEESTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCC---HHHHHHHHHHHHCCCEEEEEEC
Confidence 4555555543 3457899999999999988765
No 441
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=24.08 E-value=61 Score=29.89 Aligned_cols=37 Identities=19% Similarity=0.282 Sum_probs=27.7
Q ss_pred CCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 1 MDQRKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 1 ~~~~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
|+. ++.+|+++..+- .-+.+|..|+++|++|+++-..
T Consensus 1 M~~-~~~~V~IVGaG~-----aGl~~A~~L~~~G~~v~v~E~~ 37 (397)
T 2vou_A 1 MSP-TTDRIAVVGGSI-----SGLTAALMLRDAGVDVDVYERS 37 (397)
T ss_dssp -CC-CCSEEEEECCSH-----HHHHHHHHHHHTTCEEEEECSS
T ss_pred CCC-CCCcEEEECCCH-----HHHHHHHHHHhCCCCEEEEecC
Confidence 542 457888887663 3588899999999999998653
No 442
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=24.05 E-value=1.3e+02 Score=24.00 Aligned_cols=37 Identities=8% Similarity=0.129 Sum_probs=31.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
..|.++...+.|-..-+..|++.|..+|+.|.++...
T Consensus 5 ~~i~i~G~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~ 41 (169)
T 1xjc_A 5 NVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHH 41 (169)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEEEECCCCCCHHHHHHHHHHhhHhcCCeeeEEEeC
Confidence 4466677778899999999999999999999998865
No 443
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=24.01 E-value=78 Score=27.61 Aligned_cols=34 Identities=15% Similarity=0.253 Sum_probs=25.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.|+++++.++.| --.++|++|+++|++|.++...
T Consensus 9 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 42 (285)
T 3sc4_A 9 GKTMFISGGSRG---IGLAIAKRVAADGANVALVAKS 42 (285)
T ss_dssp TCEEEEESCSSH---HHHHHHHHHHTTTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEECC
Confidence 356666666543 4568999999999999887764
No 444
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=24.01 E-value=1e+02 Score=25.27 Aligned_cols=39 Identities=13% Similarity=0.145 Sum_probs=27.8
Q ss_pred CCcEEEEEcCCCccCHHHHH-HHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFPLPLQGHISPML-QLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l-~la~~L~~~Gh~Vt~~~~~ 43 (457)
+++||+++-....|+..-+. .+++.|.+.|++|.++--.
T Consensus 5 ~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 44 (211)
T 1ydg_A 5 APVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKVR 44 (211)
T ss_dssp CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 46787777655578776654 4567777789999887763
No 445
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=23.99 E-value=89 Score=27.46 Aligned_cols=34 Identities=21% Similarity=0.224 Sum_probs=25.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.|+++++.++.| --.++|++|+++|++|.++...
T Consensus 41 ~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r~ 74 (293)
T 3rih_A 41 ARSVLVTGGTKG---IGRGIATVFARAGANVAVAARS 74 (293)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEECC
Confidence 356777766642 4678999999999999988753
No 446
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=23.99 E-value=1e+02 Score=26.80 Aligned_cols=33 Identities=15% Similarity=0.153 Sum_probs=24.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.|+++++.++.| --.++|++|+++|++|.++..
T Consensus 29 gk~vlVTGas~g---IG~aia~~la~~G~~V~~~~r 61 (277)
T 3gvc_A 29 GKVAIVTGAGAG---IGLAVARRLADEGCHVLCADI 61 (277)
T ss_dssp TCEEEETTTTST---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 466777766542 346899999999999988765
No 447
>1got_G GT-gamma; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: a.137.3.1 PDB: 1tbg_E 2trc_G 1b9y_B 1b9x_B 1a0r_G*
Probab=23.98 E-value=1.1e+02 Score=20.54 Aligned_cols=39 Identities=5% Similarity=0.024 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhccccc
Q 012735 412 EEIRSRIFRLKEKANHSWKQGRSSFESINSLVTHILSLETFT 453 (457)
Q Consensus 412 ~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (457)
..+|+-.++|+.++.- +.=-.-+++++++++++++.+++
T Consensus 20 ~~lr~~veqLr~el~~---~RikVS~aa~~L~~Yce~~~~~D 58 (73)
T 1got_G 20 DKLKMEVDQLKKEVTL---ERMLVSKCCEEFRDYVEERSGED 58 (73)
T ss_dssp HHHHHHHHHHHHHTTC---CCCCHHHHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHCC---chhhHHHHHHHHHHHHHhcCCCC
Confidence 4567777777777642 33446788899999999987765
No 448
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=23.97 E-value=1.5e+02 Score=25.06 Aligned_cols=37 Identities=14% Similarity=0.324 Sum_probs=27.2
Q ss_pred cEEEEEcCCCc-----------cCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQ-----------GHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~-----------gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+||+++..... -...=+....+.|.++|++|+++++.
T Consensus 4 ~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~ 51 (243)
T 1rw7_A 4 KKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSET 51 (243)
T ss_dssp CEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSS
T ss_pred ceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCC
Confidence 47887776421 13455677788899999999999985
No 449
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=23.96 E-value=1e+02 Score=26.94 Aligned_cols=34 Identities=15% Similarity=0.165 Sum_probs=28.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+-|+++++.++.| --.++|++|++.|.+|.+...
T Consensus 28 ~gKvalVTGas~G---IG~aiA~~la~~Ga~V~i~~r 61 (273)
T 4fgs_A 28 NAKIAVITGATSG---IGLAAAKRFVAEGARVFITGR 61 (273)
T ss_dssp TTCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCcCCH---HHHHHHHHHHHCCCEEEEEEC
Confidence 4578999988765 568899999999999988765
No 450
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=23.96 E-value=50 Score=28.97 Aligned_cols=31 Identities=19% Similarity=0.305 Sum_probs=24.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|||.|+..|..|. .+|+.|.+.||+|+++..
T Consensus 1 m~i~iiG~G~mG~-----~~a~~l~~~g~~V~~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGN-----PMAKNLMKHGYPLIIYDV 31 (296)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHTTCCEEEECS
T ss_pred CeEEEEeccHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 4788887777664 678899999999987754
No 451
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=23.93 E-value=97 Score=27.66 Aligned_cols=32 Identities=13% Similarity=0.096 Sum_probs=22.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
++|+++... |. --..|++.|.++||+|+.+..
T Consensus 3 ~~vlVtGat--G~--iG~~l~~~L~~~g~~V~~~~r 34 (348)
T 1ek6_A 3 EKVLVTGGA--GY--IGSHTVLELLEAGYLPVVIDN 34 (348)
T ss_dssp SEEEEETTT--SH--HHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEECCC--CH--HHHHHHHHHHHCCCEEEEEec
Confidence 466665433 32 346789999999999999865
No 452
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=23.92 E-value=1.2e+02 Score=25.45 Aligned_cols=48 Identities=10% Similarity=0.162 Sum_probs=34.6
Q ss_pred hHHHHHHHHhhccCCCCeeEEEeCCCcchHHHHHhHcCCCeEEEecchHHHHHHH
Q 012735 88 PFRDCLAKLLADVEEEPIACLISDAMLPFTQAVADSLKLPRIVLRTGGASSFVVF 142 (457)
Q Consensus 88 ~~~~~l~~l~~~~~~~~pDlvi~D~~~~~~~~~A~~l~iP~v~~~~~~~~~~~~~ 142 (457)
.....+.++.+. +.|+||.+. .+..+|+++|+|.+.+.+.-+...++.
T Consensus 142 e~~~~i~~l~~~----G~~vVVG~~---~~~~~A~~~Gl~~vlI~s~eSI~~Ai~ 189 (225)
T 2pju_A 142 DARGQINELKAN----GTEAVVGAG---LITDLAEEAGMTGIFIYSAATVRQAFS 189 (225)
T ss_dssp HHHHHHHHHHHT----TCCEEEESH---HHHHHHHHTTSEEEESSCHHHHHHHHH
T ss_pred HHHHHHHHHHHC----CCCEEECCH---HHHHHHHHcCCcEEEECCHHHHHHHHH
Confidence 445577777776 899999984 357899999999999875433333333
No 453
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=23.87 E-value=1.1e+02 Score=26.14 Aligned_cols=32 Identities=13% Similarity=0.181 Sum_probs=23.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|.++++.++. .--.++|++|+++|++|.++..
T Consensus 8 k~vlVTGas~---gIG~~ia~~l~~~G~~V~~~~r 39 (263)
T 3ai3_A 8 KVAVITGSSS---GIGLAIAEGFAKEGAHIVLVAR 39 (263)
T ss_dssp CEEEEESCSS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCc---hHHHHHHHHHHHCCCEEEEEcC
Confidence 4555555443 3457899999999999988765
No 454
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=23.85 E-value=82 Score=22.62 Aligned_cols=47 Identities=2% Similarity=0.039 Sum_probs=33.4
Q ss_pred hCCcccccCccchhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHhcc
Q 012735 359 EGIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVMVE 408 (457)
Q Consensus 359 ~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~~ 408 (457)
..+|+|++ ..+......+..+ .|+--.+.+.++.++|.++|++++..
T Consensus 79 ~~~~ii~~--~~~~~~~~~~~~~-~g~~~~l~kp~~~~~l~~~i~~~~~~ 125 (127)
T 2gkg_A 79 KNVPIVII--GNPDGFAQHRKLK-AHADEYVAKPVDADQLVERAGALIGF 125 (127)
T ss_dssp TTSCEEEE--ECGGGHHHHHHST-TCCSEEEESSCCHHHHHHHHHHHHCC
T ss_pred cCCCEEEE--ecCCchhHHHHHH-hCcchheeCCCCHHHHHHHHHHHHcC
Confidence 46888888 4444455555556 37755565678999999999998864
No 455
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=23.84 E-value=1.2e+02 Score=25.67 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=23.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.|.++++.++. .--.++|++|+++|++|.++..
T Consensus 19 ~k~vlVTGas~---gIG~~~a~~l~~~G~~V~~~~r 51 (249)
T 1o5i_A 19 DKGVLVLAASR---GIGRAVADVLSQEGAEVTICAR 51 (249)
T ss_dssp TCEEEEESCSS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCC---HHHHHHHHHHHHCCCEEEEEcC
Confidence 44555555442 3456889999999999988765
No 456
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=23.84 E-value=42 Score=24.76 Aligned_cols=65 Identities=9% Similarity=0.055 Sum_probs=44.3
Q ss_pred hcCCCCCCcccccChhH---------HHHHHhhCCcccccCccchhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHh
Q 012735 336 LAHPAVGAFWTHNGWNS---------TLESICEGIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVM 406 (457)
Q Consensus 336 L~~~~~~~~I~hgG~~s---------~~eal~~gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il 406 (457)
+..++| +|--.|..| +..|...|+|+|++=-.+.+. .-..+++. +. .+- ..+.+.|.++|+..+
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~-a~--~iV-~Wn~~~I~~aI~~~~ 108 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAV-SS--EVV-GWNPHCIRDALEDAL 108 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHH-CS--EEE-CSCHHHHHHHHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhh-Cc--eec-cCCHHHHHHHHHhcc
Confidence 345677 888888877 667788999999988776541 12224432 22 222 378999999998876
Q ss_pred c
Q 012735 407 V 407 (457)
Q Consensus 407 ~ 407 (457)
+
T Consensus 109 ~ 109 (111)
T 1eiw_A 109 D 109 (111)
T ss_dssp C
T ss_pred C
Confidence 4
No 457
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=23.83 E-value=91 Score=26.74 Aligned_cols=33 Identities=27% Similarity=0.280 Sum_probs=24.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.|.++++.++.| --.++|+.|+++|++|.++..
T Consensus 26 ~k~vlVTGas~g---IG~~la~~l~~~G~~v~i~~~ 58 (267)
T 4iiu_A 26 SRSVLVTGASKG---IGRAIARQLAADGFNIGVHYH 58 (267)
T ss_dssp CCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 456666666532 357899999999999988765
No 458
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=23.79 E-value=62 Score=28.47 Aligned_cols=34 Identities=18% Similarity=0.203 Sum_probs=24.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+++|+++.. .|.+ -..++++|.++||+|+.++..
T Consensus 4 ~~~ilVtGa--tG~i--G~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIVGG--TGYI--GKRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCCEEEEST--TSTT--HHHHHHHHHHTTCCEEEECCS
T ss_pred CCEEEEEcC--CcHH--HHHHHHHHHhCCCcEEEEECC
Confidence 466776643 3433 356889999999999988764
No 459
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=23.78 E-value=89 Score=26.43 Aligned_cols=32 Identities=9% Similarity=0.073 Sum_probs=22.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|.++++.++. .--.+++++|+++|++|.++..
T Consensus 6 k~vlVTGas~---giG~~ia~~l~~~G~~V~~~~r 37 (245)
T 1uls_A 6 KAVLITGAAH---GIGRATLELFAKEGARLVACDI 37 (245)
T ss_dssp CEEEEESTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCC---HHHHHHHHHHHHCCCEEEEEeC
Confidence 3445554443 3466899999999999998765
No 460
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=23.74 E-value=49 Score=33.46 Aligned_cols=34 Identities=18% Similarity=0.370 Sum_probs=26.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
++.+|+++..+..| +..|..|+++||+|+++-..
T Consensus 390 ~~~~VvIIGgG~AG-----l~aA~~La~~G~~V~liE~~ 423 (690)
T 3k30_A 390 SDARVLVVGAGPSG-----LEAARALGVRGYDVVLAEAG 423 (690)
T ss_dssp SCCEEEEECCSHHH-----HHHHHHHHHHTCEEEEECSS
T ss_pred ccceEEEECCCHHH-----HHHHHHHHHCCCeEEEEecC
Confidence 45788888777544 77889999999999998663
No 461
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=23.74 E-value=81 Score=28.42 Aligned_cols=34 Identities=15% Similarity=0.168 Sum_probs=23.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCC-CeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQG-FTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~G-h~Vt~~~~~ 43 (457)
.++|+++...+ .--..|+++|.++| |+|+.+...
T Consensus 46 ~~~vlVtGatG----~iG~~l~~~L~~~g~~~V~~~~r~ 80 (357)
T 2x6t_A 46 GRMIIVTGGAG----FIGSNIVKALNDKGITDILVVDNL 80 (357)
T ss_dssp --CEEEETTTS----HHHHHHHHHHHHTTCCCEEEEECC
T ss_pred CCEEEEECCCc----HHHHHHHHHHHHCCCcEEEEEecC
Confidence 35666664433 33467899999999 999988763
No 462
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=23.70 E-value=48 Score=28.43 Aligned_cols=33 Identities=6% Similarity=0.054 Sum_probs=24.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+++||.|+..|..| ..+++.|.+.||+|+++..
T Consensus 2 ~~m~i~iiG~G~mG-----~~~a~~l~~~g~~v~~~~~ 34 (259)
T 2ahr_A 2 NAMKIGIIGVGKMA-----SAIIKGLKQTPHELIISGS 34 (259)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHTTSSCEEEEECS
T ss_pred CccEEEEECCCHHH-----HHHHHHHHhCCCeEEEECC
Confidence 46799999866555 4678899999999877654
No 463
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=23.68 E-value=1.1e+02 Score=26.29 Aligned_cols=37 Identities=19% Similarity=0.188 Sum_probs=29.6
Q ss_pred cEEEEEc-CCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFP-LPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~-~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+.|.|+. -++-|=..-...||..|+++|++|.++-..
T Consensus 19 ~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D 56 (262)
T 2ph1_A 19 SRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDAD 56 (262)
T ss_dssp CEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred eEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3455544 446699999999999999999999998765
No 464
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=23.68 E-value=68 Score=28.75 Aligned_cols=34 Identities=9% Similarity=-0.089 Sum_probs=21.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEe
Q 012735 4 RKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIH 41 (457)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~ 41 (457)
.+.++|+++...+ .--..|+++|.++|+++.+++
T Consensus 22 ~~~~~vlVtGatG----~iG~~l~~~L~~~g~~~~v~~ 55 (346)
T 4egb_A 22 SNAMNILVTGGAG----FIGSNFVHYMLQSYETYKIIN 55 (346)
T ss_dssp --CEEEEEETTTS----HHHHHHHHHHHHHCTTEEEEE
T ss_pred cCCCeEEEECCcc----HHHHHHHHHHHhhCCCcEEEE
Confidence 3456777665433 334588999999995554443
No 465
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=23.67 E-value=44 Score=29.83 Aligned_cols=35 Identities=20% Similarity=0.221 Sum_probs=24.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHHCCC--eEEEEeCC
Q 012735 4 RKGRRLVLFPLPLQGHISPMLQLANILHSQGF--TITIIHTS 43 (457)
Q Consensus 4 ~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh--~Vt~~~~~ 43 (457)
.+++||.++..|..|- .+|..|+..|| +|+++...
T Consensus 5 ~~~mkI~IiGaG~vG~-----~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 5 VKPTKLAVIGAGAVGS-----TLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp --CCEEEEECCSHHHH-----HHHHHHHHTTCCSEEEEECSS
T ss_pred CCCCEEEEECCCHHHH-----HHHHHHHhCCCCCEEEEEeCC
Confidence 3457999987644333 37788999999 99988653
No 466
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=23.62 E-value=1.9e+02 Score=21.22 Aligned_cols=47 Identities=9% Similarity=0.133 Sum_probs=31.9
Q ss_pred CCcccccCccchhhHHHHHHHhhhccceecCCCCCHHHHHHHHHHHhcc
Q 012735 360 GIPMICMPCFTDQKVNARYVSDVWKVGLQLENGLKREEIEKTIRRVMVE 408 (457)
Q Consensus 360 gvP~v~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~l~~ai~~il~~ 408 (457)
.+|+|++--..+. ....+.-+ .|+---+.+.++.++|.++|++++..
T Consensus 78 ~~pii~~t~~~~~-~~~~~~~~-~ga~~~l~KP~~~~~L~~~i~~~l~~ 124 (136)
T 3t6k_A 78 TLPILMLTAQGDI-SAKIAGFE-AGANDYLAKPFEPQELVYRVKNILAR 124 (136)
T ss_dssp TCCEEEEECTTCH-HHHHHHHH-HTCSEEEETTCCHHHHHHHHHHHHHC
T ss_pred CccEEEEecCCCH-HHHHHHHh-cCcceEEeCCCCHHHHHHHHHHHHhc
Confidence 5677766544443 33344445 37765666678999999999999876
No 467
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=23.60 E-value=71 Score=26.29 Aligned_cols=36 Identities=17% Similarity=0.180 Sum_probs=27.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.+.+++..+..|+..-+..+++.|.++|+.|..+-.
T Consensus 22 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~ 57 (251)
T 3dkr_A 22 DTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLF 57 (251)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCC
T ss_pred CceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCC
Confidence 345555666667777788999999999998866544
No 468
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=23.57 E-value=1.2e+02 Score=25.91 Aligned_cols=35 Identities=14% Similarity=0.227 Sum_probs=24.6
Q ss_pred CcEEEEEcCC-CccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLP-LQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~-~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.|+++++.+ +.|-+ -.++|+.|+++|++|.+...
T Consensus 6 ~~k~vlVTGa~~s~gI--G~aia~~l~~~G~~V~~~~r 41 (269)
T 2h7i_A 6 DGKRILVSGIITDSSI--AFHIARVAQEQGAQLVLTGF 41 (269)
T ss_dssp TTCEEEECCCSSTTSH--HHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEECCCCCCch--HHHHHHHHHHCCCEEEEEec
Confidence 3456666665 13333 56899999999999988765
No 469
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=23.55 E-value=1.1e+02 Score=23.09 Aligned_cols=34 Identities=12% Similarity=0.163 Sum_probs=22.3
Q ss_pred CCcEEEEEcCCCccCHH--------HHHHHHHHHHHCCCeEE
Q 012735 5 KGRRLVLFPLPLQGHIS--------PMLQLANILHSQGFTIT 38 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~--------p~l~la~~L~~~Gh~Vt 38 (457)
.-||.++++.|-.|... .+-..|..|.++||.+.
T Consensus 6 ~~M~~IYIagPysg~~~n~~~~n~~~~~r~A~~l~~~G~ip~ 47 (125)
T 1t1j_A 6 GHMRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVF 47 (125)
T ss_dssp -CCCEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhhheeEECCCCCCcchHHHHHHHHHHHHHHHHHHCCCeee
Confidence 34667777777666632 34456777889999654
No 470
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=23.55 E-value=1e+02 Score=26.08 Aligned_cols=33 Identities=15% Similarity=0.117 Sum_probs=24.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.|.++++.++. .--.++|+.|+++|++|.++..
T Consensus 7 ~k~~lVTGas~---gIG~aia~~l~~~G~~V~~~~r 39 (247)
T 2jah_A 7 GKVALITGASS---GIGEATARALAAEGAAVAIAAR 39 (247)
T ss_dssp TCEEEEESCSS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCC---HHHHHHHHHHHHCCCEEEEEEC
Confidence 35556665543 3457899999999999988765
No 471
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=23.54 E-value=1.3e+02 Score=27.10 Aligned_cols=35 Identities=6% Similarity=-0.034 Sum_probs=25.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHH--CCCeEEEEeCC
Q 012735 5 KGRRLVLFPLPLQGHISPMLQLANILHS--QGFTITIIHTS 43 (457)
Q Consensus 5 ~~~~il~~~~~~~gH~~p~l~la~~L~~--~Gh~Vt~~~~~ 43 (457)
+.++|++....+ .--..|+++|++ +||+|+.+...
T Consensus 9 ~~~~vlVTGatG----~IG~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 9 ENQTILITGGAG----FVGSNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp TTCEEEEETTTS----HHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred CCCEEEEECCCC----HHHHHHHHHHHhhCCCCeEEEEECC
Confidence 356777665443 345678999999 99999998763
No 472
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=23.41 E-value=1.1e+02 Score=26.34 Aligned_cols=32 Identities=13% Similarity=0.119 Sum_probs=23.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|+++++.++. .--.+++++|+++|++|.++..
T Consensus 7 k~vlVTGas~---gIG~~ia~~l~~~G~~V~~~~r 38 (278)
T 1spx_A 7 KVAIITGSSN---GIGRATAVLFAREGAKVTITGR 38 (278)
T ss_dssp CEEEETTTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCc---hHHHHHHHHHHHCCCEEEEEeC
Confidence 4556665543 3456899999999999988765
No 473
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=23.39 E-value=1.4e+02 Score=25.51 Aligned_cols=32 Identities=6% Similarity=0.126 Sum_probs=23.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|.++++.++. .--.++|++|+++|++|.++..
T Consensus 7 k~vlITGas~---gIG~aia~~l~~~G~~V~~~~r 38 (263)
T 2a4k_A 7 KTILVTGAAS---GIGRAALDLFAREGASLVAVDR 38 (263)
T ss_dssp CEEEEESTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCC---HHHHHHHHHHHHCCCEEEEEeC
Confidence 4455554443 3456899999999999998865
No 474
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=23.32 E-value=90 Score=27.15 Aligned_cols=33 Identities=18% Similarity=0.170 Sum_probs=24.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.|+++++.++.| --.++|++|+++|++|.+...
T Consensus 25 ~k~~lVTGas~G---IG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 25 TKTAVITGSTSG---IGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 356666665543 457899999999999988765
No 475
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=23.31 E-value=1.1e+02 Score=27.31 Aligned_cols=32 Identities=19% Similarity=0.202 Sum_probs=22.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|+|++.. +.|.+ -..|+++|+++||+|+.+..
T Consensus 1 m~vlVTG--atG~i--G~~l~~~L~~~G~~V~~~~~ 32 (338)
T 1udb_A 1 MRVLVTG--GSGYI--GSHTCVQLLQNGHDVIILDN 32 (338)
T ss_dssp CEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEEC--CCCHH--HHHHHHHHHHCCCEEEEEec
Confidence 3555543 33433 45789999999999998764
No 476
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=23.28 E-value=95 Score=26.77 Aligned_cols=33 Identities=15% Similarity=0.094 Sum_probs=25.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.|+++++.++. .--.++|++|+++|++|.+...
T Consensus 28 ~k~vlVTGas~---gIG~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 28 DRIALVTGASR---GIGRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp TCEEEETTCSS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCC---HHHHHHHHHHHHCCCEEEEEeC
Confidence 45677776654 2467899999999999988765
No 477
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=23.19 E-value=75 Score=27.46 Aligned_cols=37 Identities=22% Similarity=0.177 Sum_probs=30.0
Q ss_pred CcEEEEEcCC---CccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLP---LQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~---~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
++|.+|++.+ +-|-=.-...|+..|.+||+.||..--
T Consensus 22 ~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~Ki 61 (294)
T 2c5m_A 22 SMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKI 61 (294)
T ss_dssp CCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEE
T ss_pred ceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEec
Confidence 5788898866 336667788999999999999998654
No 478
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=23.15 E-value=1e+02 Score=28.01 Aligned_cols=35 Identities=11% Similarity=0.107 Sum_probs=24.2
Q ss_pred cEEEEEecccccCCHHHHHHHHHHHhhCCCCeEEEEC
Q 012735 263 SVIYVSFGSIAAVSEAEFLEIAWGLANCKLPFLWVVR 299 (457)
Q Consensus 263 ~vv~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~ 299 (457)
++++++.|+.+- ......++++|.+.|+++.+...
T Consensus 6 ~il~~~~~~~Gh--v~~~~~La~~L~~~GheV~v~~~ 40 (402)
T 3ia7_A 6 HILFANVQGHGH--VYPSLGLVSELARRGHRITYVTT 40 (402)
T ss_dssp EEEEECCSSHHH--HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEEeCCCCcc--cccHHHHHHHHHhCCCEEEEEcC
Confidence 577787775542 23344578888888998887764
No 479
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=23.11 E-value=1.4e+02 Score=24.93 Aligned_cols=33 Identities=24% Similarity=0.152 Sum_probs=23.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.+.++++.++ | .--.+++++|+++||+|.++..
T Consensus 7 ~~~vlVtGas-g--giG~~la~~l~~~G~~V~~~~r 39 (248)
T 2pnf_A 7 GKVSLVTGST-R--GIGRAIAEKLASAGSTVIITGT 39 (248)
T ss_dssp TCEEEETTCS-S--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCC-c--hHHHHHHHHHHHCCCEEEEEeC
Confidence 3455555444 3 3456789999999999998765
No 480
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=23.11 E-value=51 Score=30.64 Aligned_cols=31 Identities=23% Similarity=0.308 Sum_probs=24.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
++|+++..+..| +..|..|+++|++|+++=.
T Consensus 1 ~dVvVIGaGiaG-----LsaA~~La~~G~~V~vlE~ 31 (425)
T 3ka7_A 1 MKTVVIGAGLGG-----LLSAARLSKAGHEVEVFER 31 (425)
T ss_dssp CEEEEECCBHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CcEEEECCCHHH-----HHHHHHHHhCCCceEEEeC
Confidence 367777666444 8889999999999999854
No 481
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=23.07 E-value=1.3e+02 Score=25.53 Aligned_cols=32 Identities=19% Similarity=0.149 Sum_probs=22.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|.++++.++. .--.+++++|+++|++|.++..
T Consensus 14 k~vlItGasg---giG~~la~~l~~~G~~V~~~~r 45 (260)
T 3awd_A 14 RVAIVTGGAQ---NIGLACVTALAEAGARVIIADL 45 (260)
T ss_dssp CEEEEETTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCc---hHHHHHHHHHHHCCCEEEEEeC
Confidence 3444444432 3457899999999999998875
No 482
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=23.07 E-value=99 Score=26.49 Aligned_cols=34 Identities=12% Similarity=0.158 Sum_probs=24.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
.|+++++.++. .--.++|++|+++|++|.++...
T Consensus 28 ~k~vlVTGas~---gIG~aia~~l~~~G~~V~~~~r~ 61 (260)
T 3un1_A 28 QKVVVITGASQ---GIGAGLVRAYRDRNYRVVATSRS 61 (260)
T ss_dssp CCEEEESSCSS---HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCC---HHHHHHHHHHHHCCCEEEEEeCC
Confidence 35566665553 34568999999999999988763
No 483
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=23.04 E-value=80 Score=29.78 Aligned_cols=38 Identities=16% Similarity=0.317 Sum_probs=34.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+..|+++..++.|-..-...||..|+++|+.|.++...
T Consensus 99 ~~vI~ivG~~GvGKTTla~~La~~l~~~G~kVllv~~D 136 (432)
T 2v3c_C 99 QNVILLVGIQGSGKTTTAAKLARYIQKRGLKPALIAAD 136 (432)
T ss_dssp CCCEEEECCSSSSTTHHHHHHHHHHHHHHCCEEEECCS
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 45788888888899999999999999999999999875
No 484
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=23.04 E-value=1.2e+02 Score=25.30 Aligned_cols=21 Identities=14% Similarity=0.192 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHCCCeEEEEeC
Q 012735 22 PMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 22 p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
--.+++++|+++|++|.++..
T Consensus 19 iG~~~a~~l~~~G~~V~~~~r 39 (244)
T 1cyd_A 19 IGRDTVKALHASGAKVVAVTR 39 (244)
T ss_dssp HHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHHCCCEEEEEeC
Confidence 456899999999999988765
No 485
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=22.99 E-value=1.5e+02 Score=25.59 Aligned_cols=32 Identities=16% Similarity=0.201 Sum_probs=23.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|+++++.++. .--.++|+.|+++|++|.++..
T Consensus 23 k~vlVTGas~---gIG~~ia~~l~~~G~~V~~~~r 54 (277)
T 2rhc_B 23 EVALVTGATS---GIGLEIARRLGKEGLRVFVCAR 54 (277)
T ss_dssp CEEEEETCSS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCC---HHHHHHHHHHHHCCCEEEEEeC
Confidence 4555555442 3456899999999999988765
No 486
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=22.96 E-value=1e+02 Score=29.47 Aligned_cols=40 Identities=13% Similarity=0.016 Sum_probs=32.3
Q ss_pred CCCcEEEEEcCCCccC--HHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 4 RKGRRLVLFPLPLQGH--ISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 4 ~~~~~il~~~~~~~gH--~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+++..++++++|+.+. ..-+..+++.|.+.|++|.+.+..
T Consensus 292 ~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 333 (482)
T 2pq6_A 292 KEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRP 333 (482)
T ss_dssp SCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEECCG
T ss_pred CCCCceEEEecCCcccCCHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 3456789999998874 455888999999999999998864
No 487
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=22.95 E-value=90 Score=26.89 Aligned_cols=34 Identities=9% Similarity=0.049 Sum_probs=27.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+-|+++++.++.| --.++|++|++.|.+|.+...
T Consensus 6 ~gKvalVTGas~G---IG~aiA~~la~~Ga~Vv~~~~ 39 (254)
T 4fn4_A 6 KNKVVIVTGAGSG---IGRAIAKKFALNDSIVVAVEL 39 (254)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHcCCEEEEEEC
Confidence 4578888887765 468899999999999988664
No 488
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=22.92 E-value=97 Score=26.80 Aligned_cols=34 Identities=12% Similarity=0.214 Sum_probs=25.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
+.|+++++.++. .--.++|++|+++|++|.++..
T Consensus 27 ~~k~~lVTGas~---GIG~aia~~la~~G~~V~~~~r 60 (272)
T 4dyv_A 27 GKKIAIVTGAGS---GVGRAVAVALAGAGYGVALAGR 60 (272)
T ss_dssp -CCEEEETTTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCc---HHHHHHHHHHHHCCCEEEEEEC
Confidence 346667776653 3457899999999999988765
No 489
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=22.90 E-value=96 Score=26.91 Aligned_cols=32 Identities=13% Similarity=0.074 Sum_probs=24.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|.++++.++. .--.++|+.|+++|++|.++..
T Consensus 30 k~vlVTGas~---gIG~~ia~~l~~~G~~V~~~~r 61 (283)
T 1g0o_A 30 KVALVTGAGR---GIGREMAMELGRRGCKVIVNYA 61 (283)
T ss_dssp CEEEETTTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCc---HHHHHHHHHHHHCCCEEEEEeC
Confidence 5666766554 3467899999999999988765
No 490
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=22.86 E-value=1.4e+02 Score=21.57 Aligned_cols=38 Identities=13% Similarity=0.375 Sum_probs=23.0
Q ss_pred CCCCCCcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 1 MDQRKGRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 1 ~~~~~~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|...++++|+++- .+-.-...+.+.|.+.|++|..+..
T Consensus 1 M~~~~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 38 (132)
T 3lte_A 1 MSLKQSKRILVVD----DDQAMAAAIERVLKRDHWQVEIAHN 38 (132)
T ss_dssp ------CEEEEEC----SCHHHHHHHHHHHHHTTCEEEEESS
T ss_pred CCCCCCccEEEEE----CCHHHHHHHHHHHHHCCcEEEEeCC
Confidence 5556678888874 3455566778888888998875543
No 491
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=22.85 E-value=92 Score=26.95 Aligned_cols=33 Identities=9% Similarity=-0.094 Sum_probs=24.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.|+++++.++. .--.++|++|+++|++|.++..
T Consensus 31 gk~~lVTGas~---GIG~aia~~la~~G~~V~~~~r 63 (273)
T 3uf0_A 31 GRTAVVTGAGS---GIGRAIAHGYARAGAHVLAWGR 63 (273)
T ss_dssp TCEEEEETTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCc---HHHHHHHHHHHHCCCEEEEEcC
Confidence 35566665554 2457899999999999988773
No 492
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=22.83 E-value=60 Score=30.85 Aligned_cols=32 Identities=16% Similarity=0.136 Sum_probs=25.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
|||.|+..|.. -.++|..|+++||+|+++...
T Consensus 3 mkI~VIG~G~v-----G~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYV-----GLVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHH-----HHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECcCHH-----HHHHHHHHHhcCCEEEEEECC
Confidence 68999876543 467899999999999988653
No 493
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=22.83 E-value=76 Score=27.28 Aligned_cols=33 Identities=3% Similarity=0.054 Sum_probs=25.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.|+++++.++.| --.++|++|+++|++|.++..
T Consensus 11 ~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 11 NKVIVIAGGIKN---LGALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHTTSSCEEEEEES
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEec
Confidence 356777766654 467899999999999998754
No 494
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=22.79 E-value=1.5e+02 Score=25.24 Aligned_cols=33 Identities=12% Similarity=0.032 Sum_probs=24.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 7 RRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 7 ~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
.|.++++.++.| --.++|++|+++|++|.+...
T Consensus 8 gk~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 8 GKKAIVIGGTHG---MGLATVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 355666655542 457899999999999988765
No 495
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=22.79 E-value=93 Score=27.13 Aligned_cols=38 Identities=11% Similarity=0.067 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 6 GRRLVLFPLPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 6 ~~~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+++||++...----..-+-.+...++++|++|++++-.
T Consensus 7 ~~rvLvv~aHPDDe~lg~GGtia~~~~~G~~V~vv~~T 44 (273)
T 3dff_A 7 ATRLLAISPHLDDAVLSFGAGLAQAAQDGANVLVYTVF 44 (273)
T ss_dssp -CEEEEEESSTTHHHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred CCCEEEEEeCCChHHHhHHHHHHHHHHCCCcEEEEEEe
Confidence 45666555443344455556667778899999998853
No 496
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=22.74 E-value=95 Score=26.49 Aligned_cols=32 Identities=22% Similarity=0.147 Sum_probs=23.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|.++++.++. .--.++|++|+++|++|.+...
T Consensus 22 k~vlVTGas~---gIG~aia~~l~~~G~~V~~~~r 53 (253)
T 2nm0_A 22 RSVLVTGGNR---GIGLAIARAFADAGDKVAITYR 53 (253)
T ss_dssp CEEEEETTTS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCC---HHHHHHHHHHHHCCCEEEEEeC
Confidence 4555555543 2457899999999999988765
No 497
>2oze_A ORF delta'; para, walker type atpases, DNA segregation, PSM19035, plasmid, DNA binding protein; HET: AGS EPE; 1.83A {Streptococcus pyogenes}
Probab=22.72 E-value=81 Score=27.62 Aligned_cols=37 Identities=11% Similarity=0.137 Sum_probs=30.8
Q ss_pred cEEEEEc---CCCccCHHHHHHHHHHHHHCCCeEEEEeCC
Q 012735 7 RRLVLFP---LPLQGHISPMLQLANILHSQGFTITIIHTS 43 (457)
Q Consensus 7 ~~il~~~---~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~~ 43 (457)
+.|+|+. -|+-|=..-...||..|+++|+.|.++-..
T Consensus 35 ~~i~v~~~s~KGGvGKTT~a~nLA~~la~~G~rVlliD~D 74 (298)
T 2oze_A 35 EAIVILNNYFKGGVGKSKLSTMFAYLTDKLNLKVLMIDKD 74 (298)
T ss_dssp SCEEEEECCSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred cEEEEEeccCCCCchHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4455554 678899999999999999999999998765
No 498
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=22.68 E-value=61 Score=27.76 Aligned_cols=30 Identities=10% Similarity=0.031 Sum_probs=20.1
Q ss_pred CeeEEEeCCCc-chHHHHHhHcCCCeEEEec
Q 012735 104 PIACLISDAML-PFTQAVADSLKLPRIVLRT 133 (457)
Q Consensus 104 ~pDlvi~D~~~-~~~~~~A~~l~iP~v~~~~ 133 (457)
+||+||..... ......-+.+|||++.+..
T Consensus 60 ~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~ 90 (260)
T 2q8p_A 60 KPTHVLSVSTIKDEMQPFYKQLNMKGYFYDF 90 (260)
T ss_dssp CCSEEEEEGGGHHHHHHHHHHHTSCCEEECC
T ss_pred CCCEEEecCccCHHHHHHHHHcCCcEEEecC
Confidence 99999986432 2223344567999998754
No 499
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=22.65 E-value=1e+02 Score=26.04 Aligned_cols=32 Identities=13% Similarity=0.132 Sum_probs=24.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHHCCCeEEEEeC
Q 012735 8 RLVLFPLPLQGHISPMLQLANILHSQGFTITIIHT 42 (457)
Q Consensus 8 ~il~~~~~~~gH~~p~l~la~~L~~~Gh~Vt~~~~ 42 (457)
|.++++.++. .--.++|++|+++|++|.+...
T Consensus 5 k~~lVTGas~---gIG~~ia~~l~~~G~~V~~~~~ 36 (246)
T 3osu_A 5 KSALVTGASR---GIGRSIALQLAEEGYNVAVNYA 36 (246)
T ss_dssp CEEEETTCSS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCC---hHHHHHHHHHHHCCCEEEEEeC
Confidence 5566665553 3457899999999999988765
No 500
>2kw0_A CCMH protein; oxidoreductase, cytochrome C maturation; NMR {Escherichia coli}
Probab=22.65 E-value=1.3e+02 Score=21.15 Aligned_cols=35 Identities=17% Similarity=0.197 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhcc
Q 012735 416 SRIFRLKEKANHSWKQGRSSFESINSLVTHILSLE 450 (457)
Q Consensus 416 ~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (457)
.-|+.|+.+++..+.+|.|.++.++.+++...+..
T Consensus 40 ~iA~dlR~~Vre~l~~G~Sd~eI~~~mv~RYGdfV 74 (90)
T 2kw0_A 40 MIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFV 74 (90)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHhcCCeE
Confidence 55677778888888899999998888887765544
Done!