BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012739
(457 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 197 bits (502), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 114/295 (38%), Positives = 167/295 (56%), Gaps = 7/295 (2%)
Query: 139 GVVQVFTYKELETATENFSEXXXXXXXXXXXXYKGVLSDGTVAAIKKLHRDGKQR-ERAF 197
G ++ F+ +EL+ A++NFS YKG L+DGT+ A+K+L + Q E F
Sbjct: 23 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQF 82
Query: 198 RMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRL 257
+ EV+++S L+ L G+C RLL+ YM NG++ L PLDW R
Sbjct: 83 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQ 142
Query: 258 IIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIST 317
IAL A L +LH+H P +IHRD K +N+LLD+ F A V DFGLAK++ D + +
Sbjct: 143 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-DYKDXHVXX 201
Query: 318 RVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEH--VLVSWAL 375
V GT G++APEY STGK + K+DV+ YGV+LLEL+TG+ D R + +L+ W
Sbjct: 202 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 261
Query: 376 PRLTSREEAVE-MVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQSL 429
L +E+ +E +VD LQG Y +++ +C Q RP M++VV+ L
Sbjct: 262 GLL--KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 191 bits (485), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 111/295 (37%), Positives = 164/295 (55%), Gaps = 7/295 (2%)
Query: 139 GVVQVFTYKELETATENFSEXXXXXXXXXXXXYKGVLSDGTVAAIKKLHRDGKQR-ERAF 197
G ++ F+ +EL+ A++NF YKG L+DG + A+K+L + Q E F
Sbjct: 15 GQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQF 74
Query: 198 RMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRL 257
+ EV+++S L+ L G+C RLL+ YM NG++ L PLDW R
Sbjct: 75 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQ 134
Query: 258 IIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIST 317
IAL A L +LH+H P +IHRD K +N+LLD+ F A V DFGLAK++ K + +
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DXHVXX 193
Query: 318 RVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEH--VLVSWAL 375
V G G++APEY STGK + K+DV+ YGV+LLEL+TG+ D R + +L+ W
Sbjct: 194 AVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253
Query: 376 PRLTSREEAVE-MVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQSL 429
L +E+ +E +VD LQG Y +++ +C Q RP M++VV+ L
Sbjct: 254 GLL--KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 147/282 (52%), Gaps = 4/282 (1%)
Query: 148 ELETATENFSEXXXXXXXXXXXXYKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRL 207
+LE AT NF YKGVL DG A+K+ + Q F E++ LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 208 HSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMAL 267
P LV L+G+C ++N +LI +YM NG L++HL+ + + W RL I + A L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 268 EFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLA 327
+LH A +IHRD K N+LLD+NF K+TDFG++K ++ + V GT GY+
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 328 PEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEM 387
PEY G+LT KSDVYS+GVVL E+L R + + P L WA+ + + ++
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES-HNNGQLEQI 268
Query: 388 VDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQSL 429
VDP+L + + L C+ + RP M DV+ L
Sbjct: 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 147/282 (52%), Gaps = 4/282 (1%)
Query: 148 ELETATENFSEXXXXXXXXXXXXYKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRL 207
+LE AT NF YKGVL DG A+K+ + Q F E++ LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 208 HSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMAL 267
P LV L+G+C ++N +LI +YM NG L++HL+ + + W RL I + A L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 268 EFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLA 327
+LH A +IHRD K N+LLD+NF K+TDFG++K ++ + V GT GY+
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 328 PEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEM 387
PEY G+LT KSDVYS+GVVL E+L R + + P L WA+ + + ++
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES-HNNGQLEQI 268
Query: 388 VDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQSL 429
VDP+L + + L C+ + RP M DV+ L
Sbjct: 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 131/232 (56%), Gaps = 16/232 (6%)
Query: 144 FTYKELETATENFSEX------XXXXXXXXXXXYKGVLSDGTVAAIKKLHR----DGKQR 193
F++ EL+ T NF E YKG +++ TVA +KKL ++
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVA-VKKLAAMVDITTEEL 73
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
++ F E+ ++++ LVELLG+ +D + L+ YMPNG+L L + PL W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT-PPLSW 132
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
R IA A + FLHE+ IHRD K +N+LLD+ F AK++DFGLA+
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPP 365
+ +R++GTT Y+APE A G++T KSD+YS+GVVLLE++TG VD +R P
Sbjct: 190 VMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP 240
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 130/232 (56%), Gaps = 16/232 (6%)
Query: 144 FTYKELETATENFSEX------XXXXXXXXXXXYKGVLSDGTVAAIKKLHR----DGKQR 193
F++ EL+ T NF E YKG +++ TVA +KKL ++
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVA-VKKLAAMVDITTEEL 67
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
++ F E+ ++++ LVELLG+ +D + L+ YMPNG+L L + PL W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT-PPLSW 126
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
R IA A + FLHE+ IHRD K +N+LLD+ F AK++DFGLA+
Sbjct: 127 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPP 365
+ R++GTT Y+APE A G++T KSD+YS+GVVLLE++TG VD +R P
Sbjct: 184 VMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP 234
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 130/232 (56%), Gaps = 16/232 (6%)
Query: 144 FTYKELETATENFSEX------XXXXXXXXXXXYKGVLSDGTVAAIKKLHR----DGKQR 193
F++ EL+ T NF E YKG +++ TVA +KKL ++
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVA-VKKLAAMVDITTEEL 73
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
++ F E+ ++++ LVELLG+ +D + L+ YMPNG+L L + PL W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT-PPLSW 132
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
R IA A + FLHE+ IHRD K +N+LLD+ F AK++DFGLA+
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPP 365
+ R++GTT Y+APE A G++T KSD+YS+GVVLLE++TG VD +R P
Sbjct: 190 VMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP 240
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 128/232 (55%), Gaps = 16/232 (6%)
Query: 144 FTYKELETATENFSEX------XXXXXXXXXXXYKGVLSDGTVAAIKKLHR----DGKQR 193
F++ EL+ T NF E YKG +++ TVA +KKL ++
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVA-VKKLAAMVDITTEEL 64
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
++ F E+ + ++ LVELLG+ +D + L+ Y PNG+L L + PL W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT-PPLSW 123
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
R IA A + FLHE+ IHRD K +N+LLD+ F AK++DFGLA+
Sbjct: 124 HXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPP 365
+R++GTT Y APE A G++T KSD+YS+GVVLLE++TG VD +R P
Sbjct: 181 VXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP 231
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 98/183 (53%), Gaps = 6/183 (3%)
Query: 178 GTVAAIKKLHRDGKQRERA--FRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNG 235
G+ A+K L ER F EV ++ RL P +V +G + +++EY+ G
Sbjct: 60 GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L + LH+ R + LD R RL +A D A + +LH PP++HRD K N+L+D+ +
Sbjct: 120 SLYRLLHKSGAREQ-LDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYT 177
Query: 296 AKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTG 355
KV DFGL+++ + S GT ++APE KSDVYS+GV+L EL T
Sbjct: 178 VKVCDFGLSRLKASXF--LXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATL 235
Query: 356 RVP 358
+ P
Sbjct: 236 QQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 98/183 (53%), Gaps = 6/183 (3%)
Query: 178 GTVAAIKKLHRDGKQRERA--FRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNG 235
G+ A+K L ER F EV ++ RL P +V +G + +++EY+ G
Sbjct: 60 GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L + LH+ R + LD R RL +A D A + +LH PP++HR+ K N+L+D+ +
Sbjct: 120 SLYRLLHKSGAREQ-LDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYT 177
Query: 296 AKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTG 355
KV DFGL+++ + S GT ++APE KSDVYS+GV+L EL T
Sbjct: 178 VKVCDFGLSRLKASTFLS--SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATL 235
Query: 356 RVP 358
+ P
Sbjct: 236 QQP 238
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 107/201 (53%), Gaps = 25/201 (12%)
Query: 174 VLSDGTVAAIKKLHRDGKQRE-------RAFRMEVDLLSRLHSPQLVELLGYCADQNHRL 226
++ D +V AIK L + E + F+ EV ++S L+ P +V+L G N
Sbjct: 40 LVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPR 97
Query: 227 LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCS 286
++ E++P G L HR ++ P+ W +L + LD A+ +E++ ++ PP++HRD +
Sbjct: 98 MVMEFVPCGDL---YHRLLDKAHPIKWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSP 153
Query: 287 NVL---LDQN--FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEY--ASTGKLTTK 339
N+ LD+N AKV DFGL++ ++G +LG ++APE A T K
Sbjct: 154 NIFLQSLDENAPVCAKVADFGLSQQSVHSVSG-----LLGNFQWMAPETIGAEEESYTEK 208
Query: 340 SDVYSYGVVLLELLTGRVPVD 360
+D YS+ ++L +LTG P D
Sbjct: 209 ADTYSFAMILYTILTGEGPFD 229
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 100/191 (52%), Gaps = 12/191 (6%)
Query: 181 AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQH 240
AIK + R+G E F E +++ +L P+LV+L G C +Q L++E+M +G L +
Sbjct: 35 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDY 93
Query: 241 LHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTD 300
L + T L + LD + +L E VIHRD N L+ +N KV+D
Sbjct: 94 LRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSD 147
Query: 301 FGLAKMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
FG+ + V D+ T+ + +PE S + ++KSDV+S+GV++ E+ + G++P
Sbjct: 148 FGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 205
Query: 359 VDPNRPPGEHV 369
+ NR E V
Sbjct: 206 YE-NRSNSEVV 215
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 25/201 (12%)
Query: 174 VLSDGTVAAIKKLHRDGKQRE-------RAFRMEVDLLSRLHSPQLVELLGYCADQNHRL 226
++ D +V AIK L + E + F+ EV ++S L+ P +V+L G N
Sbjct: 40 LVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPR 97
Query: 227 LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCS 286
++ E++P G L HR ++ P+ W +L + LD A+ +E++ ++ PP++HRD +
Sbjct: 98 MVMEFVPCGDL---YHRLLDKAHPIKWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSP 153
Query: 287 NVL---LDQN--FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEY--ASTGKLTTK 339
N+ LD+N AKV DFG ++ ++G +LG ++APE A T K
Sbjct: 154 NIFLQSLDENAPVCAKVADFGTSQQSVHSVSG-----LLGNFQWMAPETIGAEEESYTEK 208
Query: 340 SDVYSYGVVLLELLTGRVPVD 360
+D YS+ ++L +LTG P D
Sbjct: 209 ADTYSFAMILYTILTGEGPFD 229
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 100/191 (52%), Gaps = 12/191 (6%)
Query: 181 AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQH 240
AIK + R+G E F E +++ +L P+LV+L G C +Q L+ E+M +G L +
Sbjct: 34 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 92
Query: 241 LHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTD 300
L + T L + LD + +L E + VIHRD N L+ +N KV+D
Sbjct: 93 LRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAS---VIHRDLAARNCLVGENQVIKVSD 146
Query: 301 FGLAKMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
FG+ + V D+ T+ + +PE S + ++KSDV+S+GV++ E+ + G++P
Sbjct: 147 FGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 204
Query: 359 VDPNRPPGEHV 369
+ NR E V
Sbjct: 205 YE-NRSNSEVV 214
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 89/180 (49%), Gaps = 9/180 (5%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHR--LLISEYMPNG 235
G V A+KKL ++ R F E+++L L +V+ G C R LI EY+P G
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 105
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L+ +L +H R +D L +E+L T IHRD N+L++ R
Sbjct: 106 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 159
Query: 296 AKVTDFGLAKMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+ DFGL K++ DK ++ + APE + K + SDV+S+GVVL EL T
Sbjct: 160 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 9/180 (5%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYC--ADQNHRLLISEYMPNG 235
G V A+KKL ++ R F E+++L L +V+ G C A + + LI EY+P G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L+ +L +H R +D L +E+L T IHRD N+L++ R
Sbjct: 102 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 155
Query: 296 AKVTDFGLAKMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+ DFGL K++ DK ++ + APE + K + SDV+S+GVVL EL T
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 89/180 (49%), Gaps = 9/180 (5%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHR--LLISEYMPNG 235
G V A+KKL ++ R F E+++L L +V+ G C R LI EY+P G
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 129
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L+ +L +H R +D L +E+L T IHRD N+L++ R
Sbjct: 130 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 183
Query: 296 AKVTDFGLAKMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+ DFGL K++ DK ++ + APE + K + SDV+S+GVVL EL T
Sbjct: 184 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 99/191 (51%), Gaps = 12/191 (6%)
Query: 181 AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQH 240
AIK + R+G E F E +++ +L P+LV+L G C +Q L+ E+M +G L +
Sbjct: 37 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 95
Query: 241 LHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTD 300
L + T L + LD + +L E VIHRD N L+ +N KV+D
Sbjct: 96 LRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSD 149
Query: 301 FGLAKMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
FG+ + V D+ T+ + +PE S + ++KSDV+S+GV++ E+ + G++P
Sbjct: 150 FGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 207
Query: 359 VDPNRPPGEHV 369
+ NR E V
Sbjct: 208 YE-NRSNSEVV 217
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 89/180 (49%), Gaps = 9/180 (5%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHR--LLISEYMPNG 235
G V A+KKL ++ R F E+++L L +V+ G C R LI EY+P G
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 103
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L+ +L +H R +D L +E+L T IHRD N+L++ R
Sbjct: 104 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 157
Query: 296 AKVTDFGLAKMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+ DFGL K++ DK ++ + APE + K + SDV+S+GVVL EL T
Sbjct: 158 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 106/201 (52%), Gaps = 25/201 (12%)
Query: 174 VLSDGTVAAIKKLHRDGKQRE-------RAFRMEVDLLSRLHSPQLVELLGYCADQNHRL 226
++ D +V AIK L + E + F+ EV ++S L+ P +V+L G N
Sbjct: 40 LVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM--HNPPR 97
Query: 227 LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCS 286
++ E++P G L HR ++ P+ W +L + LD A+ +E++ ++ PP++HRD +
Sbjct: 98 MVMEFVPCGDL---YHRLLDKAHPIKWSVKLRLMLDIALGIEYM-QNQNPPIVHRDLRSP 153
Query: 287 NVL---LDQN--FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEY--ASTGKLTTK 339
N+ LD+N AKV DF L++ ++G +LG ++APE A T K
Sbjct: 154 NIFLQSLDENAPVCAKVADFSLSQQSVHSVSG-----LLGNFQWMAPETIGAEEESYTEK 208
Query: 340 SDVYSYGVVLLELLTGRVPVD 360
+D YS+ ++L +LTG P D
Sbjct: 209 ADTYSFAMILYTILTGEGPFD 229
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 9/180 (5%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYC--ADQNHRLLISEYMPNG 235
G V A+KKL ++ R F E+++L L +V+ G C A + + LI EY+P G
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 104
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L+ +L +H R +D L +E+L T IHRD N+L++ R
Sbjct: 105 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 158
Query: 296 AKVTDFGLAKMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+ DFGL K++ DK ++ + APE + K + SDV+S+GVVL EL T
Sbjct: 159 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 9/180 (5%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYC--ADQNHRLLISEYMPNG 235
G V A+KKL ++ R F E+++L L +V+ G C A + + LI EY+P G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L+ +L +H R +D L +E+L T IHRD N+L++ R
Sbjct: 99 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 152
Query: 296 AKVTDFGLAKMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+ DFGL K++ DK ++ + APE + K + SDV+S+GVVL EL T
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 99/191 (51%), Gaps = 12/191 (6%)
Query: 181 AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQH 240
AIK + R+G E F E +++ +L P+LV+L G C +Q L+ E+M +G L +
Sbjct: 34 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 92
Query: 241 LHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTD 300
L + T L + LD + +L E VIHRD N L+ +N KV+D
Sbjct: 93 LRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSD 146
Query: 301 FGLAKMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
FG+ + V D+ T+ + +PE S + ++KSDV+S+GV++ E+ + G++P
Sbjct: 147 FGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 204
Query: 359 VDPNRPPGEHV 369
+ NR E V
Sbjct: 205 YE-NRSNSEVV 214
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 9/180 (5%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYC--ADQNHRLLISEYMPNG 235
G V A+KKL ++ R F E+++L L +V+ G C A + + LI EY+P G
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 97
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L+ +L +H R +D L +E+L T IHRD N+L++ R
Sbjct: 98 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 151
Query: 296 AKVTDFGLAKMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+ DFGL K++ DK ++ + APE + K + SDV+S+GVVL EL T
Sbjct: 152 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 99/191 (51%), Gaps = 12/191 (6%)
Query: 181 AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQH 240
AIK + R+G E F E +++ +L P+LV+L G C +Q L+ E+M +G L +
Sbjct: 32 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 90
Query: 241 LHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTD 300
L + T L + LD + +L E VIHRD N L+ +N KV+D
Sbjct: 91 LRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSD 144
Query: 301 FGLAKMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
FG+ + V D+ T+ + +PE S + ++KSDV+S+GV++ E+ + G++P
Sbjct: 145 FGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 202
Query: 359 VDPNRPPGEHV 369
+ NR E V
Sbjct: 203 YE-NRSNSEVV 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 9/180 (5%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYC--ADQNHRLLISEYMPNG 235
G V A+KKL ++ R F E+++L L +V+ G C A + + LI EY+P G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L+ +L +H R +D L +E+L T IHRD N+L++ R
Sbjct: 117 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 170
Query: 296 AKVTDFGLAKMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+ DFGL K++ DK ++ + APE + K + SDV+S+GVVL EL T
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 9/180 (5%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYC--ADQNHRLLISEYMPNG 235
G V A+KKL ++ R F E+++L L +V+ G C A + + LI EY+P G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L+ +L +H R +D L +E+L T IHRD N+L++ R
Sbjct: 117 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 170
Query: 296 AKVTDFGLAKMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+ DFGL K++ DK ++ + APE + K + SDV+S+GVVL EL T
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 9/180 (5%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYC--ADQNHRLLISEYMPNG 235
G V A+KKL ++ R F E+++L L +V+ G C A + + LI EY+P G
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 96
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L+ +L +H R +D L +E+L T IHRD N+L++ R
Sbjct: 97 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 150
Query: 296 AKVTDFGLAKMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+ DFGL K++ DK ++ + APE + K + SDV+S+GVVL EL T
Sbjct: 151 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 9/180 (5%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYC--ADQNHRLLISEYMPNG 235
G V A+KKL ++ R F E+++L L +V+ G C A + + LI EY+P G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L+ +L +H R +D L +E+L T IHRD N+L++ R
Sbjct: 99 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 152
Query: 296 AKVTDFGLAKMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+ DFGL K++ DK ++ + APE + K + SDV+S+GVVL EL T
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 9/180 (5%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYC--ADQNHRLLISEYMPNG 235
G V A+KKL ++ R F E+++L L +V+ G C A + + LI EY+P G
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 102
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L+ +L +H R +D L +E+L T IHRD N+L++ R
Sbjct: 103 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 156
Query: 296 AKVTDFGLAKMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+ DFGL K++ DK ++ + APE + K + SDV+S+GVVL EL T
Sbjct: 157 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 92/180 (51%), Gaps = 9/180 (5%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYC--ADQNHRLLISEYMPNG 235
G V A+KKL ++ R F E+++L L +V+ G C A + + LI E++P G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYG 101
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L+++L +H R +D L +E+L T IHRD N+L++ R
Sbjct: 102 SLREYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 155
Query: 296 AKVTDFGLAKMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+ DFGL K++ DK ++ + APE + K + SDV+S+GVVL EL T
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 91/180 (50%), Gaps = 9/180 (5%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLG--YCADQNHRLLISEYMPNG 235
G + A+K+L G ++R F+ E+ +L LHS +V+ G Y + L+ EY+P+G
Sbjct: 36 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSG 95
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
L+ L RH R LD L+ + +E+L +HRD N+L++
Sbjct: 96 CLRDFLQRHRAR---LDASRLLLYSSQICKGMEYLGSRRC---VHRDLAARNILVESEAH 149
Query: 296 AKVTDFGLAKMVS-DKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+ DFGLAK++ DK + + APE S + +SDV+S+GVVL EL T
Sbjct: 150 VKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 92/180 (51%), Gaps = 9/180 (5%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLG--YCADQNHRLLISEYMPNG 235
G + A+K+L G ++R F+ E+ +L LHS +V+ G Y + L+ EY+P+G
Sbjct: 39 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 98
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
L+ L RH R LD L+ + +E+L + +HRD N+L++
Sbjct: 99 CLRDFLQRHRAR---LDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAH 152
Query: 296 AKVTDFGLAKMVS-DKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+ DFGLAK++ DK + + APE S + +SDV+S+GVVL EL T
Sbjct: 153 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 9/180 (5%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYC--ADQNHRLLISEYMPNG 235
G V A+KKL ++ R F E+++L L +V+ G C A + + LI EY+P G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L+ +L +H R +D L +E+L T IHRD N+L++ R
Sbjct: 99 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 152
Query: 296 AKVTDFGLAKMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+ DFGL K++ DK ++ + APE + K + SDV+S+GVVL EL T
Sbjct: 153 VKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 92/180 (51%), Gaps = 9/180 (5%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLG--YCADQNHRLLISEYMPNG 235
G + A+K+L G ++R F+ E+ +L LHS +V+ G Y + L+ EY+P+G
Sbjct: 40 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 99
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
L+ L RH R LD L+ + +E+L + +HRD N+L++
Sbjct: 100 CLRDFLQRHRAR---LDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAH 153
Query: 296 AKVTDFGLAKMVS-DKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+ DFGLAK++ DK + + APE S + +SDV+S+GVVL EL T
Sbjct: 154 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 92/180 (51%), Gaps = 9/180 (5%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLG--YCADQNHRLLISEYMPNG 235
G + A+K+L G ++R F+ E+ +L LHS +V+ G Y + L+ EY+P+G
Sbjct: 52 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 111
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
L+ L RH R LD L+ + +E+L + +HRD N+L++
Sbjct: 112 CLRDFLQRHRAR---LDASRLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAH 165
Query: 296 AKVTDFGLAKMVS-DKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+ DFGLAK++ DK + + APE S + +SDV+S+GVVL EL T
Sbjct: 166 VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 99/191 (51%), Gaps = 12/191 (6%)
Query: 181 AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQH 240
AIK + ++G E F E +++ +L P+LV+L G C +Q L+ E+M +G L +
Sbjct: 54 VAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 112
Query: 241 LHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTD 300
L + T L + LD + +L E VIHRD N L+ +N KV+D
Sbjct: 113 LRTQRGLFAA---ETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSD 166
Query: 301 FGLAKMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
FG+ + V D+ T+ + +PE S + ++KSDV+S+GV++ E+ + G++P
Sbjct: 167 FGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 224
Query: 359 VDPNRPPGEHV 369
+ NR E V
Sbjct: 225 YE-NRSNSEVV 234
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTL 237
G V +K+L R ++ +R F EV ++ L P +++ +G I+EY+ GTL
Sbjct: 35 GEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94
Query: 238 QQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAK 297
+ + +++Y W R+ A D A + +LH +IHRD N L+ +N
Sbjct: 95 RGIIKSMDSQY---PWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVV 148
Query: 298 VTDFGLAKMVSDKINGQISTR------------VLGTTGYLAPEYASTGKLTTKSDVYSY 345
V DFGLA+++ D+ R V+G ++APE + K DV+S+
Sbjct: 149 VADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSF 208
Query: 346 GVVLLELLTGRVPVDPNRPP 365
G+VL E++ GRV DP+ P
Sbjct: 209 GIVLCEII-GRVNADPDYLP 227
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 90/180 (50%), Gaps = 9/180 (5%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYC--ADQNHRLLISEYMPNG 235
G V A+KKL ++ R F E+++L L +V+ G C A + + LI EY+P G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L+ +L H R +D L +E+L T IHRD N+L++ R
Sbjct: 102 SLRDYLQAHAER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENR 155
Query: 296 AKVTDFGLAKMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+ DFGL K++ DK ++ + APE + K + SDV+S+GVVL EL T
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 126/267 (47%), Gaps = 28/267 (10%)
Query: 178 GTVAAIKKLHRD-GKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHR--LLISEYMPN 234
G + A+K L D G Q ++ E+D+L L+ +++ G C DQ + L+ EY+P
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
G+L+ +L RH+ L L+ A + +LH IHR+ NVLLD +
Sbjct: 103 GSLRDYLPRHSIGLAQL-----LLFAQQICEGMAYLHSQH---YIHRNLAARNVLLDNDR 154
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVL----GTTGYLAPEYASTGKLTTKSDVYSYGVVLL 350
K+ DFGLAK V + G RV + APE K SDV+S+GV L
Sbjct: 155 LVKIGDFGLAKAVPE---GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLY 211
Query: 351 ELLTGRVPVDPNR-PPGEHV-LVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXXXXX 408
ELLT D ++ PP + + L+ A ++T E+++ + P K
Sbjct: 212 ELLTH---CDSSQSPPTKFLELIGIAQGQMTVL-RLTELLERGERLPRPDKCPCEVYHLM 267
Query: 409 XVCVQPEAAYRPLMTDVVQSLIPVVKN 435
C + EA++RP ++LIP++K
Sbjct: 268 KNCWETEASFRP----TFENLIPILKT 290
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 126/267 (47%), Gaps = 28/267 (10%)
Query: 178 GTVAAIKKLHRD-GKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHR--LLISEYMPN 234
G + A+K L D G Q ++ E+D+L L+ +++ G C DQ + L+ EY+P
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
G+L+ +L RH+ L L+ A + +LH IHR+ NVLLD +
Sbjct: 103 GSLRDYLPRHSIGLAQL-----LLFAQQICEGMAYLHAQH---YIHRNLAARNVLLDNDR 154
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVL----GTTGYLAPEYASTGKLTTKSDVYSYGVVLL 350
K+ DFGLAK V + G RV + APE K SDV+S+GV L
Sbjct: 155 LVKIGDFGLAKAVPE---GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLY 211
Query: 351 ELLTGRVPVDPNR-PPGEHV-LVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXXXXX 408
ELLT D ++ PP + + L+ A ++T E+++ + P K
Sbjct: 212 ELLTH---CDSSQSPPTKFLELIGIAQGQMTVL-RLTELLERGERLPRPDKCPCEVYHLM 267
Query: 409 XVCVQPEAAYRPLMTDVVQSLIPVVKN 435
C + EA++RP ++LIP++K
Sbjct: 268 KNCWETEASFRP----TFENLIPILKT 290
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 89/180 (49%), Gaps = 9/180 (5%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHR--LLISEYMPNG 235
G V A+KKL ++ R F E+++L L +V+ G C R LI EY+P G
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 99
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L+ +L +H R +D L +E+L T IHR+ N+L++ R
Sbjct: 100 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENR 153
Query: 296 AKVTDFGLAKMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+ DFGL K++ DK ++ + APE + K + SDV+S+GVVL EL T
Sbjct: 154 VKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 86/181 (47%), Gaps = 23/181 (12%)
Query: 189 DGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRY 248
D Q R E L + L P ++ L G C + + L+ E+ G L + L R
Sbjct: 45 DISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS--GKRI 102
Query: 249 RP---LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQ--------NFRAK 297
P ++W A+ A + +LH+ A P+IHRD K SN+L+ Q N K
Sbjct: 103 PPDILVNW------AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILK 156
Query: 298 VTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRV 357
+TDFGLA+ + + G ++APE + SDV+SYGV+L ELLTG V
Sbjct: 157 ITDFGLAR----EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEV 212
Query: 358 P 358
P
Sbjct: 213 P 213
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 130/286 (45%), Gaps = 36/286 (12%)
Query: 178 GTVAAIKKLHRD-GKQRERAFRMEVDLLSRLHSPQLVELLGYCADQN--HRLLISEYMPN 234
G + A+K L D G Q ++ E+D+L L+ +++ G C D L+ EY+P
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL 119
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
G+L+ +L RH+ L L+ A + +LH IHRD NVLLD +
Sbjct: 120 GSLRDYLPRHSIGLAQL-----LLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDR 171
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVL----GTTGYLAPEYASTGKLTTKSDVYSYGVVLL 350
K+ DFGLAK V + G RV + APE K SDV+S+GV L
Sbjct: 172 LVKIGDFGLAKAVPE---GHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLY 228
Query: 351 ELLTGRVPVDPNR-PPGEHV-LVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXXXXX 408
ELLT D ++ PP + + L+ A ++T E+++ + P K
Sbjct: 229 ELLTH---CDSSQSPPTKFLELIGIAQGQMTVL-RLTELLERGERLPRPDKCPAEVYHLM 284
Query: 409 XVCVQPEAAYRPLMTDVVQSLIPVVKNNAAGAISFGSSRFQHQTPS 454
C + EA++RP ++LIP++K ++Q Q PS
Sbjct: 285 KNCWETEASFRP----TFENLIPILKTV--------HEKYQGQAPS 318
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 108/234 (46%), Gaps = 14/234 (5%)
Query: 129 TTAYNYVRDKGVVQVFTYKELETATENFSEXXXXXXXXXXXXYKGVLSDGTVAAIKKLHR 188
T N +R +G Y E+E + S YKG I K+
Sbjct: 13 TQEKNKIRPRGQRDSSYYWEIEASEVMLS--TRIGSGSFGTVYKGKWHGDVAVKILKVVD 70
Query: 189 DGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRY 248
++ +AFR EV +L + ++ +GY N +++++ +L +HLH ++
Sbjct: 71 PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQETKF 129
Query: 249 RPLDWRTRLI-IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMV 307
+ +LI IA A +++LH +IHRD K +N+ L + K+ DFGLA +
Sbjct: 130 QMF----QLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182
Query: 308 SDKINGQISTRVLGTTGYLAPE---YASTGKLTTKSDVYSYGVVLLELLTGRVP 358
S Q + G+ ++APE + +SDVYSYG+VL EL+TG +P
Sbjct: 183 SRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 90/178 (50%), Gaps = 10/178 (5%)
Query: 185 KLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRH 244
K+ ++G E F E + +L P+LV+ G C+ + +++EY+ NG L +L H
Sbjct: 38 KMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSH 97
Query: 245 NNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLA 304
P L + D + FL H IHRD N L+D++ KV+DFG+
Sbjct: 98 GKGLEP---SQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMT 151
Query: 305 KMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
+ V D+ + T+ + APE K ++KSDV+++G+++ E+ + G++P D
Sbjct: 152 RYVLDDQYVSSVGTKF--PVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYD 207
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 98/192 (51%), Gaps = 15/192 (7%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T AIK L + G AF E ++ +L +LV+L +++ +++E
Sbjct: 284 WMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTE 341
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMA-LEFLHEHATPPVIHRDFKCSNVL 289
YM G+L L +Y L + + MA +E ++ +HRD + +N+L
Sbjct: 342 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN------YVHRDLRAANIL 395
Query: 290 LDQNFRAKVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGV 347
+ +N KV DFGLA+++ D + + R + APE A G+ T KSDV+S+G+
Sbjct: 396 VGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 452
Query: 348 VLLELLT-GRVP 358
+L EL T GRVP
Sbjct: 453 LLTELTTKGRVP 464
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 98/192 (51%), Gaps = 15/192 (7%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T AIK L + G AF E ++ +L +LV+L +++ +++E
Sbjct: 201 WMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTE 258
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMA-LEFLHEHATPPVIHRDFKCSNVL 289
YM G+L L +Y L + + MA +E ++ +HRD + +N+L
Sbjct: 259 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN------YVHRDLRAANIL 312
Query: 290 LDQNFRAKVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGV 347
+ +N KV DFGLA+++ D + + R + APE A G+ T KSDV+S+G+
Sbjct: 313 VGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 369
Query: 348 VLLELLT-GRVP 358
+L EL T GRVP
Sbjct: 370 LLTELTTKGRVP 381
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 98/192 (51%), Gaps = 15/192 (7%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T AIK L + G AF E ++ +L +LV+L +++ +++E
Sbjct: 201 WMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTE 258
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMA-LEFLHEHATPPVIHRDFKCSNVL 289
YM G+L L +Y L + + MA +E ++ +HRD + +N+L
Sbjct: 259 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN------YVHRDLRAANIL 312
Query: 290 LDQNFRAKVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGV 347
+ +N KV DFGLA+++ D + + R + APE A G+ T KSDV+S+G+
Sbjct: 313 VGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 369
Query: 348 VLLELLT-GRVP 358
+L EL T GRVP
Sbjct: 370 LLTELTTKGRVP 381
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 98/191 (51%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T AIK L + G AF E ++ +L +LV+L +++ + ++E
Sbjct: 25 WMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIXI-VTE 82
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMA-LEFLHEHATPPVIHRDFKCSNVL 289
YM G+L L +Y L + + MA +E ++ +HRD + +N+L
Sbjct: 83 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN------YVHRDLRAANIL 136
Query: 290 LDQNFRAKVTDFGLAKMVSD-KINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGLA+++ D + + + + APE A G+ T KSDV+S+G++
Sbjct: 137 VGENLVCKVADFGLARLIEDNEXTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGIL 194
Query: 349 LLELLT-GRVP 358
L EL T GRVP
Sbjct: 195 LTELTTKGRVP 205
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 114/248 (45%), Gaps = 28/248 (11%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
KQR R F E ++ + P ++ L G ++++EYM NG+L L +H+ ++
Sbjct: 88 KQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 251 LDWRTRLIIAL-DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSD 309
+ +L+ L A +++L + +HRD N+L++ N KV+DFGLA+++ D
Sbjct: 147 I----QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLED 199
Query: 310 KINGQISTRVLGT-TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVDPNRPPGE 367
+TR + +PE + K T+ SDV+SYG+VL E+++ G P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------- 251
Query: 368 HVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQ 427
W + S ++ ++ VD + P C Q + RP +V
Sbjct: 252 -----WEM----SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
Query: 428 SLIPVVKN 435
L +++N
Sbjct: 303 ILDKLIRN 310
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 98/191 (51%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T AIK L + G AF E ++ +L +LV+L +++ +++E
Sbjct: 28 WMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTE 85
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMA-LEFLHEHATPPVIHRDFKCSNVL 289
YM G+L L +Y L + + MA +E ++ +HRD + +N+L
Sbjct: 86 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN------YVHRDLRAANIL 139
Query: 290 LDQNFRAKVTDFGLAKMVSD-KINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGLA+++ D + + + + APE A G+ T KSDV+S+G++
Sbjct: 140 VGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGIL 197
Query: 349 LLELLT-GRVP 358
L EL T GRVP
Sbjct: 198 LTELTTKGRVP 208
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 15/192 (7%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T AIK L + G AF E ++ +L +LV+L +++ ++ E
Sbjct: 201 WMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVGE 258
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMA-LEFLHEHATPPVIHRDFKCSNVL 289
YM G+L L +Y L + + MA +E ++ +HRD + +N+L
Sbjct: 259 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN------YVHRDLRAANIL 312
Query: 290 LDQNFRAKVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGV 347
+ +N KV DFGLA+++ D + + R + APE A G+ T KSDV+S+G+
Sbjct: 313 VGENLVCKVADFGLARLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 369
Query: 348 VLLELLT-GRVP 358
+L EL T GRVP
Sbjct: 370 LLTELTTKGRVP 381
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 203 LLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALD 262
+LS + P ++ + G D +I +Y+ G L L + P+ A +
Sbjct: 59 MLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPV----AKFYAAE 114
Query: 263 CAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGT 322
+ALE+LH + +I+RD K N+LLD+N K+TDFG AK V D ++ + GT
Sbjct: 115 VCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGT 166
Query: 323 TGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
Y+APE ST D +S+G+++ E+L G P
Sbjct: 167 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 96/189 (50%), Gaps = 12/189 (6%)
Query: 185 KLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRH 244
K+ ++G E F E ++ L +LV+L G C Q +I+EYM NG L +L
Sbjct: 38 KMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM 97
Query: 245 NNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLA 304
+R++ + L + D A+E+L + +HRD N L++ KV+DFGL+
Sbjct: 98 RHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 151
Query: 305 KMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD-- 360
+ V D+ + ++ + PE K ++KSD++++GV++ E+ + G++P +
Sbjct: 152 RYVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 209
Query: 361 PNRPPGEHV 369
N EH+
Sbjct: 210 TNSETAEHI 218
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 96/189 (50%), Gaps = 12/189 (6%)
Query: 185 KLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRH 244
K+ ++G E F E ++ L +LV+L G C Q +I+EYM NG L +L
Sbjct: 54 KMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM 113
Query: 245 NNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLA 304
+R++ + L + D A+E+L + +HRD N L++ KV+DFGL+
Sbjct: 114 RHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
Query: 305 KMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD-- 360
+ V D+ + ++ + PE K ++KSD++++GV++ E+ + G++P +
Sbjct: 168 RYVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 225
Query: 361 PNRPPGEHV 369
N EH+
Sbjct: 226 TNSETAEHI 234
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 96/189 (50%), Gaps = 12/189 (6%)
Query: 185 KLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRH 244
K+ ++G E F E ++ L +LV+L G C Q +I+EYM NG L +L
Sbjct: 45 KMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM 104
Query: 245 NNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLA 304
+R++ + L + D A+E+L + +HRD N L++ KV+DFGL+
Sbjct: 105 RHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 158
Query: 305 KMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD-- 360
+ V D+ + ++ + PE K ++KSD++++GV++ E+ + G++P +
Sbjct: 159 RYVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 216
Query: 361 PNRPPGEHV 369
N EH+
Sbjct: 217 TNSETAEHI 225
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 98/191 (51%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T AIK L + G AF E ++ +L +LV+L +++ ++I E
Sbjct: 35 WMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-E 92
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMA-LEFLHEHATPPVIHRDFKCSNVL 289
YM G+L L +Y L + + MA +E ++ +HRD + +N+L
Sbjct: 93 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN------YVHRDLRAANIL 146
Query: 290 LDQNFRAKVTDFGLAKMVSD-KINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGLA+++ D + + + + APE A G+ T KSDV+S+G++
Sbjct: 147 VGENLVCKVADFGLARLIEDNEXTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGIL 204
Query: 349 LLELLT-GRVP 358
L EL T GRVP
Sbjct: 205 LTELTTKGRVP 215
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 28/248 (11%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
KQR R F E ++ + P ++ L G ++++EYM NG+L L +H+ ++
Sbjct: 88 KQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 251 LDWRTRLIIAL-DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSD 309
+ +L+ L A +++L + +HRD N+L++ N KV+DFGL++++ D
Sbjct: 147 I----QLVGMLRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 310 KINGQISTRVLGT-TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVDPNRPPGE 367
+TR + +PE + K T+ SDV+SYG+VL E+++ G P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------- 251
Query: 368 HVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQ 427
W + S ++ ++ VD + P C Q + RP +V
Sbjct: 252 -----WEM----SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
Query: 428 SLIPVVKN 435
L +++N
Sbjct: 303 ILDKLIRN 310
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 8/139 (5%)
Query: 227 LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCS 286
++ EY+ TL+ +H P+ + + + D AL F H++ +IHRD K +
Sbjct: 93 IVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 287 NVLLDQNFRAKVTDFGLAKMVSDKINGQISTR-VLGTTGYLAPEYASTGKLTTKSDVYSY 345
N+L+ KV DFG+A+ ++D N T V+GT YL+PE A + +SDVYS
Sbjct: 146 NILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 346 GVVLLELLTGRVPVDPNRP 364
G VL E+LTG P + P
Sbjct: 206 GCVLYEVLTGEPPFTGDSP 224
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 96/189 (50%), Gaps = 12/189 (6%)
Query: 185 KLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRH 244
K+ ++G E F E ++ L +LV+L G C Q +I+EYM NG L +L
Sbjct: 39 KMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM 98
Query: 245 NNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLA 304
+R++ + L + D A+E+L + +HRD N L++ KV+DFGL+
Sbjct: 99 RHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 152
Query: 305 KMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD-- 360
+ V D+ + ++ + PE K ++KSD++++GV++ E+ + G++P +
Sbjct: 153 RYVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 210
Query: 361 PNRPPGEHV 369
N EH+
Sbjct: 211 TNSETAEHI 219
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 98/191 (51%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T AIK L + G AF E ++ +L +LV+L +++ ++I E
Sbjct: 35 WMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-E 92
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMA-LEFLHEHATPPVIHRDFKCSNVL 289
YM G+L L +Y L + + MA +E ++ +HRD + +N+L
Sbjct: 93 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN------YVHRDLRAANIL 146
Query: 290 LDQNFRAKVTDFGLAKMVSD-KINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGLA+++ D + + + + APE A G+ T KSDV+S+G++
Sbjct: 147 VGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGIL 204
Query: 349 LLELLT-GRVP 358
L EL T GRVP
Sbjct: 205 LTELTTKGRVP 215
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 96/184 (52%), Gaps = 16/184 (8%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRL-LISEYMPNGT 236
G A+K + D + AF E ++++L LV+LLG ++ L +++EYM G+
Sbjct: 216 GNKVAVKCIKNDATAQ--AFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 273
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
L +L D L +LD A+E+L + +HRD NVL+ ++ A
Sbjct: 274 LVDYLRSRGRSVLGGD--CLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVA 328
Query: 297 KVTDFGLAKMVSD-KINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT- 354
KV+DFGL K S + G++ + + APE K +TKSDV+S+G++L E+ +
Sbjct: 329 KVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKFSTKSDVWSFGILLWEIYSF 382
Query: 355 GRVP 358
GRVP
Sbjct: 383 GRVP 386
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 98/191 (51%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T AIK L + G AF E ++ +L +LV+L +++ +++E
Sbjct: 24 WMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTE 81
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMA-LEFLHEHATPPVIHRDFKCSNVL 289
YM G+L L +Y L + + MA +E ++ +HRD + +N+L
Sbjct: 82 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN------YVHRDLRAANIL 135
Query: 290 LDQNFRAKVTDFGLAKMVSD-KINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGLA+++ D + + + + APE A G+ T KSDV+S+G++
Sbjct: 136 VGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGIL 193
Query: 349 LLELLT-GRVP 358
L EL T GRVP
Sbjct: 194 LTELTTKGRVP 204
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 96/189 (50%), Gaps = 12/189 (6%)
Query: 185 KLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRH 244
K+ ++G E F E ++ L +LV+L G C Q +I+EYM NG L +L
Sbjct: 34 KMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM 93
Query: 245 NNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLA 304
+R++ + L + D A+E+L + +HRD N L++ KV+DFGL+
Sbjct: 94 RHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 147
Query: 305 KMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD-- 360
+ V D+ + ++ + PE K ++KSD++++GV++ E+ + G++P +
Sbjct: 148 RYVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 205
Query: 361 PNRPPGEHV 369
N EH+
Sbjct: 206 TNSETAEHI 214
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 98/191 (51%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T AIK L + G AF E ++ +L +LV+L +++ +++E
Sbjct: 35 WMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTE 92
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMA-LEFLHEHATPPVIHRDFKCSNVL 289
YM G+L L +Y L + + MA +E ++ +HRD + +N+L
Sbjct: 93 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN------YVHRDLRAANIL 146
Query: 290 LDQNFRAKVTDFGLAKMVSD-KINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGLA+++ D + + + + APE A G+ T KSDV+S+G++
Sbjct: 147 VGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGIL 204
Query: 349 LLELLT-GRVP 358
L EL T GRVP
Sbjct: 205 LTELTTKGRVP 215
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 14/199 (7%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
Y+GV ++ A+K L D + E F E ++ + P LV+LLG C + +I+
Sbjct: 28 YEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 86
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
E+M G L +L R NR + + L +A + A+E+L + IHRD N L
Sbjct: 87 EFMTYGNLLDYL-RECNR-QEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 141
Query: 290 LDQNFRAKVTDFGLAK-MVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGL++ M D + + APE + K + KSDV+++GV+
Sbjct: 142 VGENHLVKVADFGLSRLMTGDTFTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVL 199
Query: 349 LLELLT-GRVP---VDPNR 363
L E+ T G P +DP++
Sbjct: 200 LWEIATYGMSPYPGIDPSQ 218
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 98/191 (51%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T AIK L + G AF E ++ +L +LV+L +++ +++E
Sbjct: 32 WMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTE 89
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMA-LEFLHEHATPPVIHRDFKCSNVL 289
YM G+L L +Y L + + MA +E ++ +HRD + +N+L
Sbjct: 90 YMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN------YVHRDLRAANIL 143
Query: 290 LDQNFRAKVTDFGLAKMVSD-KINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGLA+++ D + + + + APE A G+ T KSDV+S+G++
Sbjct: 144 VGENLVCKVADFGLARLIEDNEWTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGIL 201
Query: 349 LLELLT-GRVP 358
L EL T GRVP
Sbjct: 202 LTELTTKGRVP 212
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 96/184 (52%), Gaps = 16/184 (8%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRL-LISEYMPNGT 236
G A+K + D + AF E ++++L LV+LLG ++ L +++EYM G+
Sbjct: 44 GNKVAVKCIKNDATAQ--AFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 101
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
L +L D L +LD A+E+L + +HRD NVL+ ++ A
Sbjct: 102 LVDYLRSRGRSVLGGD--CLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVA 156
Query: 297 KVTDFGLAKMVSD-KINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT- 354
KV+DFGL K S + G++ + + APE K +TKSDV+S+G++L E+ +
Sbjct: 157 KVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKFSTKSDVWSFGILLWEIYSF 210
Query: 355 GRVP 358
GRVP
Sbjct: 211 GRVP 214
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 98/191 (51%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T AIK L + G AF E ++ +L +LV+L +++ +++E
Sbjct: 26 WMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTE 83
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMA-LEFLHEHATPPVIHRDFKCSNVL 289
YM G+L L +Y L + + MA +E ++ +HRD + +N+L
Sbjct: 84 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN------YVHRDLRAANIL 137
Query: 290 LDQNFRAKVTDFGLAKMVSD-KINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGLA+++ D + + + + APE A G+ T KSDV+S+G++
Sbjct: 138 VGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGIL 195
Query: 349 LLELLT-GRVP 358
L EL T GRVP
Sbjct: 196 LTELTTKGRVP 206
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 28/248 (11%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
KQR R F E ++ + P ++ L G ++++EYM NG+L L +H+ ++
Sbjct: 88 KQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 251 LDWRTRLIIAL-DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSD 309
+ +L+ L A +++L + +HRD N+L++ N KV+DFGL++++ D
Sbjct: 147 I----QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 310 KINGQISTRVLGT-TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVDPNRPPGE 367
+TR + +PE + K T+ SDV+SYG+VL E+++ G P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------- 251
Query: 368 HVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQ 427
W + S ++ ++ VD + P C Q + RP +V
Sbjct: 252 -----WEM----SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
Query: 428 SLIPVVKN 435
L +++N
Sbjct: 303 ILDKLIRN 310
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 98/191 (51%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T AIK L + G AF E ++ +L +LV+L +++ +++E
Sbjct: 32 WMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTE 89
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMA-LEFLHEHATPPVIHRDFKCSNVL 289
YM G+L L +Y L + + MA +E ++ +HRD + +N+L
Sbjct: 90 YMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN------YVHRDLRAANIL 143
Query: 290 LDQNFRAKVTDFGLAKMVSD-KINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGLA+++ D + + + + APE A G+ T KSDV+S+G++
Sbjct: 144 VGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGIL 201
Query: 349 LLELLT-GRVP 358
L EL T GRVP
Sbjct: 202 LTELTTKGRVP 212
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 197 FRMEVDLLSRLHSPQLVELLGYCADQNHR----LLISEYMPNGTLQQHLHRHNNRYRPLD 252
FR E + L+ P +V + + ++ EY+ TL+ +H P+
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG----PMT 114
Query: 253 WRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN 312
+ + + D AL F H++ +IHRD K +N+++ KV DFG+A+ ++D N
Sbjct: 115 PKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 313 GQISTR-VLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
T V+GT YL+PE A + +SDVYS G VL E+LTG P + P
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 28/248 (11%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
KQR R F E ++ + P ++ L G ++++EYM NG+L L +H+ ++
Sbjct: 88 KQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 251 LDWRTRLIIAL-DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSD 309
+ +L+ L A +++L + +HRD N+L++ N KV+DFGL++++ D
Sbjct: 147 I----QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 310 KINGQISTRVLGT-TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVDPNRPPGE 367
+TR + +PE + K T+ SDV+SYG+VL E+++ G P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------- 251
Query: 368 HVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQ 427
W + S ++ ++ VD + P C Q + RP +V
Sbjct: 252 -----WEM----SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
Query: 428 SLIPVVKN 435
L +++N
Sbjct: 303 ILDKLIRN 310
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 28/248 (11%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
KQR R F E ++ + P ++ L G ++++EYM NG+L L +H+ ++
Sbjct: 88 KQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 251 LDWRTRLIIAL-DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSD 309
+ +L+ L A +++L + +HRD N+L++ N KV+DFGL++++ D
Sbjct: 147 I----QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 310 KINGQISTRVLGT-TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVDPNRPPGE 367
+TR + +PE + K T+ SDV+SYG+VL E+++ G P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------- 251
Query: 368 HVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQ 427
W + S ++ ++ VD + P C Q + RP +V
Sbjct: 252 -----WEM----SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
Query: 428 SLIPVVKN 435
L +++N
Sbjct: 303 ILDKLIRN 310
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 28/248 (11%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
KQR R F E ++ + P ++ L G ++++EYM NG+L L +H+ ++
Sbjct: 88 KQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 251 LDWRTRLIIAL-DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSD 309
+ +L+ L A +++L + +HRD N+L++ N KV+DFGL++++ D
Sbjct: 147 I----QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 310 KINGQISTRVLGT-TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVDPNRPPGE 367
+TR + +PE + K T+ SDV+SYG+VL E+++ G P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------- 251
Query: 368 HVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQ 427
W + S ++ ++ VD + P C Q + RP +V
Sbjct: 252 -----WEM----SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
Query: 428 SLIPVVKN 435
L +++N
Sbjct: 303 ILDKLIRN 310
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 96/189 (50%), Gaps = 12/189 (6%)
Query: 185 KLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRH 244
K+ ++G E F E ++ L +LV+L G C Q +I+EYM NG L +L
Sbjct: 54 KMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM 113
Query: 245 NNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLA 304
+R++ + L + D A+E+L + +HRD N L++ KV+DFGL+
Sbjct: 114 RHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
Query: 305 KMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD-- 360
+ V D+ + ++ + PE K ++KSD++++GV++ E+ + G++P +
Sbjct: 168 RYVLDDEETSSVGSKF--PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 225
Query: 361 PNRPPGEHV 369
N EH+
Sbjct: 226 TNSETAEHI 234
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 88/186 (47%), Gaps = 11/186 (5%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
EV + +L P ++EL Y D N+ L+ E NG + ++L NR +P
Sbjct: 61 EVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL---KNRVKPFSENEARHF 117
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ +LH H ++HRD SN+LL +N K+ DFGLA + K+ + +
Sbjct: 118 MHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQL--KMPHEKHYTL 172
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPN---RPPGEHVLVSWALP 376
GT Y++PE A+ +SDV+S G + LL GR P D + + VL + +P
Sbjct: 173 CGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMP 232
Query: 377 RLTSRE 382
S E
Sbjct: 233 SFLSIE 238
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 8/139 (5%)
Query: 227 LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCS 286
++ EY+ TL+ +H P+ + + + D AL F H++ +IHRD K +
Sbjct: 93 IVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 287 NVLLDQNFRAKVTDFGLAKMVSDKINGQISTR-VLGTTGYLAPEYASTGKLTTKSDVYSY 345
N+++ KV DFG+A+ ++D N T V+GT YL+PE A + +SDVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 346 GVVLLELLTGRVPVDPNRP 364
G VL E+LTG P + P
Sbjct: 206 GCVLYEVLTGEPPFTGDSP 224
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 113/248 (45%), Gaps = 28/248 (11%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
KQR R F E ++ + P ++ L G ++++EYM NG+L L +H+ ++
Sbjct: 88 KQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 251 LDWRTRLIIAL-DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSD 309
+ +L+ L A +++L + +HRD N+L++ N KV+DFGL +++ D
Sbjct: 147 I----QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLED 199
Query: 310 KINGQISTRVLGT-TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVDPNRPPGE 367
+TR + +PE + K T+ SDV+SYG+VL E+++ G P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------- 251
Query: 368 HVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQ 427
W + S ++ ++ VD + P C Q + RP +V
Sbjct: 252 -----WEM----SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
Query: 428 SLIPVVKN 435
L +++N
Sbjct: 303 ILDKLIRN 310
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 8/139 (5%)
Query: 227 LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCS 286
++ EY+ TL+ +H P+ + + + D AL F H++ +IHRD K +
Sbjct: 93 IVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 287 NVLLDQNFRAKVTDFGLAKMVSDKINGQISTR-VLGTTGYLAPEYASTGKLTTKSDVYSY 345
N+++ KV DFG+A+ ++D N T V+GT YL+PE A + +SDVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 346 GVVLLELLTGRVPVDPNRP 364
G VL E+LTG P + P
Sbjct: 206 GCVLYEVLTGEPPFTGDSP 224
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 19/198 (9%)
Query: 182 AIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHL 241
AIK++ + +++ AF +E+ LSR++ P +V+L G C N L+ EY G+L L
Sbjct: 36 AIKQIESESERK--AFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVL 91
Query: 242 HRHNNRYRPLDWRTR---LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA-K 297
H PL + T + L C+ + +LH +IHRD K N+LL K
Sbjct: 92 HGAE----PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLK 147
Query: 298 VTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRV 357
+ DFG A + + T G+ ++APE + K DV+S+G++L E++T R
Sbjct: 148 ICDFGTACDIQTHM-----TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 202
Query: 358 PVDPNRPPGEHVLVSWAL 375
P D P ++ WA+
Sbjct: 203 PFDEIGGPAFRIM--WAV 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 8/139 (5%)
Query: 227 LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCS 286
++ EY+ TL+ +H P+ + + + D AL F H++ +IHRD K +
Sbjct: 93 IVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 287 NVLLDQNFRAKVTDFGLAKMVSDKINGQISTR-VLGTTGYLAPEYASTGKLTTKSDVYSY 345
N+++ KV DFG+A+ ++D N T V+GT YL+PE A + +SDVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 346 GVVLLELLTGRVPVDPNRP 364
G VL E+LTG P + P
Sbjct: 206 GCVLYEVLTGEPPFTGDSP 224
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 28/248 (11%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
KQR R F E ++ + P ++ L G ++++EYM NG+L L +H+ ++
Sbjct: 86 KQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 144
Query: 251 LDWRTRLIIAL-DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSD 309
+ +L+ L A +++L + +HRD N+L++ N KV+DFGL++++ D
Sbjct: 145 I----QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 197
Query: 310 KINGQISTRVLGT-TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVDPNRPPGE 367
+TR + +PE + K T+ SDV+SYG+VL E+++ G P
Sbjct: 198 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------- 249
Query: 368 HVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQ 427
W + S ++ ++ VD + P C Q + RP +V
Sbjct: 250 -----WEM----SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 300
Query: 428 SLIPVVKN 435
L +++N
Sbjct: 301 ILDKLIRN 308
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 96/184 (52%), Gaps = 16/184 (8%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRL-LISEYMPNGT 236
G A+K + D + AF E ++++L LV+LLG ++ L +++EYM G+
Sbjct: 29 GNKVAVKCIKNDATAQ--AFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 86
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
L +L D L +LD A+E+L + +HRD NVL+ ++ A
Sbjct: 87 LVDYLRSRGRSVLGGD--CLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVA 141
Query: 297 KVTDFGLAKMVSD-KINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT- 354
KV+DFGL K S + G++ + + APE K +TKSDV+S+G++L E+ +
Sbjct: 142 KVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKFSTKSDVWSFGILLWEIYSF 195
Query: 355 GRVP 358
GRVP
Sbjct: 196 GRVP 199
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
Y+GV ++ A+K L D + E F E ++ + P LV+LLG C + +I+
Sbjct: 28 YEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 86
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
E+M G L +L R NR + + L +A + A+E+L + IHRD N L
Sbjct: 87 EFMTYGNLLDYL-RECNR-QEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 141
Query: 290 LDQNFRAKVTDFGLAKMVSDKINGQISTRVLGT---TGYLAPEYASTGKLTTKSDVYSYG 346
+ +N KV DFGL+++++ G T G + APE + K + KSDV+++G
Sbjct: 142 VGENHLVKVADFGLSRLMT----GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 197
Query: 347 VVLLELLT-GRVP---VDPNR 363
V+L E+ T G P +DP++
Sbjct: 198 VLLWEIATYGMSPYPGIDPSQ 218
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 98/191 (51%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T AIK L + G AF E ++ ++ +LV+L +++ +++E
Sbjct: 35 WMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEEPI-YIVTE 92
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMA-LEFLHEHATPPVIHRDFKCSNVL 289
YM G+L L +Y L + + MA +E ++ +HRD + +N+L
Sbjct: 93 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN------YVHRDLRAANIL 146
Query: 290 LDQNFRAKVTDFGLAKMVSD-KINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGLA+++ D + + + + APE A G+ T KSDV+S+G++
Sbjct: 147 VGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGIL 204
Query: 349 LLELLT-GRVP 358
L EL T GRVP
Sbjct: 205 LTELTTKGRVP 215
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 97/191 (50%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T AIK L + G AF E ++ +L +LV+L +++ ++ E
Sbjct: 35 WMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVCE 92
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMA-LEFLHEHATPPVIHRDFKCSNVL 289
YM G+L L +Y L + + MA +E ++ +HRD + +N+L
Sbjct: 93 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN------YVHRDLRAANIL 146
Query: 290 LDQNFRAKVTDFGLAKMVSD-KINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGLA+++ D + + + + APE A G+ T KSDV+S+G++
Sbjct: 147 VGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGIL 204
Query: 349 LLELLT-GRVP 358
L EL T GRVP
Sbjct: 205 LTELTTKGRVP 215
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 97/191 (50%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T AIK L + G AF E ++ +L +LV+L +++ +++E
Sbjct: 35 WMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTE 92
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMA-LEFLHEHATPPVIHRDFKCSNVL 289
YM G L L +Y L + + MA +E ++ +HRD + +N+L
Sbjct: 93 YMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN------YVHRDLRAANIL 146
Query: 290 LDQNFRAKVTDFGLAKMVSD-KINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGLA+++ D + + + + APE A G+ T KSDV+S+G++
Sbjct: 147 VGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGIL 204
Query: 349 LLELLT-GRVP 358
L EL T GRVP
Sbjct: 205 LTELTTKGRVP 215
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 97/192 (50%), Gaps = 15/192 (7%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T AIK L + G AF E ++ +L +LV+L +++ +++E
Sbjct: 202 WMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTE 259
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMA-LEFLHEHATPPVIHRDFKCSNVL 289
YM G+L L +Y L + + MA +E ++ +HRD + +N+L
Sbjct: 260 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN------YVHRDLRAANIL 313
Query: 290 LDQNFRAKVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGV 347
+ +N KV DFGL +++ D + + R + APE A G+ T KSDV+S+G+
Sbjct: 314 VGENLVCKVADFGLGRLIEDN---EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGI 370
Query: 348 VLLELLT-GRVP 358
+L EL T GRVP
Sbjct: 371 LLTELTTKGRVP 382
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 89/166 (53%), Gaps = 10/166 (6%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
KQR R F E ++ + P ++ L G ++++EYM NG+L L +H+ ++
Sbjct: 59 KQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 117
Query: 251 LDWRTRLIIAL-DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSD 309
+ +L+ L A +++L + +HRD N+L++ N KV+DFGL++++ D
Sbjct: 118 I----QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 170
Query: 310 KINGQISTRVLGT-TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
+TR + +PE + K T+ SDV+SYG+VL E+++
Sbjct: 171 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 19/198 (9%)
Query: 182 AIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHL 241
AIK++ + +++ AF +E+ LSR++ P +V+L G C N L+ EY G+L L
Sbjct: 35 AIKQIESESERK--AFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVL 90
Query: 242 HRHNNRYRPLDWRTR---LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA-K 297
H PL + T + L C+ + +LH +IHRD K N+LL K
Sbjct: 91 HGAE----PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLK 146
Query: 298 VTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRV 357
+ DFG A + + T G+ ++APE + K DV+S+G++L E++T R
Sbjct: 147 ICDFGTACDIQTHM-----TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 201
Query: 358 PVDPNRPPGEHVLVSWAL 375
P D P ++ WA+
Sbjct: 202 PFDEIGGPAFRIM--WAV 217
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 89/166 (53%), Gaps = 10/166 (6%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
KQR R F E ++ + P ++ L G ++++EYM NG+L L +H+ ++
Sbjct: 76 KQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 134
Query: 251 LDWRTRLIIAL-DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSD 309
+ +L+ L A +++L + +HRD N+L++ N KV+DFGL++++ D
Sbjct: 135 I----QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 187
Query: 310 KINGQISTRVLGT-TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
+TR + +PE + K T+ SDV+SYG+VL E+++
Sbjct: 188 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 14/188 (7%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
Y+GV ++ A+K L D + E F E ++ + P LV+LLG C + +I+
Sbjct: 32 YEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 90
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
E+M G L +L R NR + ++ L +A + A+E+L + IHRD N L
Sbjct: 91 EFMTYGNLLDYL-RECNR-QEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 145
Query: 290 LDQNFRAKVTDFGLAKMVSDKINGQISTRVLGT---TGYLAPEYASTGKLTTKSDVYSYG 346
+ +N KV DFGL+++++ G T G + APE + K + KSDV+++G
Sbjct: 146 VGENHLVKVADFGLSRLMT----GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 201
Query: 347 VVLLELLT 354
V+L E+ T
Sbjct: 202 VLLWEIAT 209
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 14/188 (7%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
Y+GV ++ A+K L D + E F E ++ + P LV+LLG C + +I+
Sbjct: 35 YEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 93
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
E+M G L +L R NR + ++ L +A + A+E+L + IHRD N L
Sbjct: 94 EFMTYGNLLDYL-RECNR-QEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 148
Query: 290 LDQNFRAKVTDFGLAKMVSDKINGQISTRVLGT---TGYLAPEYASTGKLTTKSDVYSYG 346
+ +N KV DFGL+++++ G T G + APE + K + KSDV+++G
Sbjct: 149 VGENHLVKVADFGLSRLMT----GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 204
Query: 347 VVLLELLT 354
V+L E+ T
Sbjct: 205 VLLWEIAT 212
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 97/191 (50%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T AIK L + G AF E ++ +L +LV+L +++ +++E
Sbjct: 35 WMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTE 92
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMA-LEFLHEHATPPVIHRDFKCSNVL 289
YM G+L L +Y L + + MA +E ++ +HRD +N+L
Sbjct: 93 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN------YVHRDLAAANIL 146
Query: 290 LDQNFRAKVTDFGLAKMVSD-KINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGLA+++ D + + + + APE A G+ T KSDV+S+G++
Sbjct: 147 VGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGIL 204
Query: 349 LLELLT-GRVP 358
L EL T GRVP
Sbjct: 205 LTELTTKGRVP 215
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 14/188 (7%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
Y+GV ++ A+K L D + E F E ++ + P LV+LLG C + +I+
Sbjct: 31 YEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 89
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
E+M G L +L R NR + ++ L +A + A+E+L + IHRD N L
Sbjct: 90 EFMTYGNLLDYL-RECNR-QEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 144
Query: 290 LDQNFRAKVTDFGLAKMVSDKINGQISTRVLGT---TGYLAPEYASTGKLTTKSDVYSYG 346
+ +N KV DFGL+++++ G T G + APE + K + KSDV+++G
Sbjct: 145 VGENHLVKVADFGLSRLMT----GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 200
Query: 347 VVLLELLT 354
V+L E+ T
Sbjct: 201 VLLWEIAT 208
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 94/186 (50%), Gaps = 10/186 (5%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
Y+GV ++ A+K L D + E F E ++ + P LV+LLG C + +I+
Sbjct: 35 YEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 93
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
E+M G L +L R NR + ++ L +A + A+E+L + IHRD N L
Sbjct: 94 EFMTYGNLLDYL-RECNR-QEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 148
Query: 290 LDQNFRAKVTDFGLAK-MVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGL++ M D + + APE + K + KSDV+++GV+
Sbjct: 149 VGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVL 206
Query: 349 LLELLT 354
L E+ T
Sbjct: 207 LWEIAT 212
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 94/186 (50%), Gaps = 10/186 (5%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
Y+GV ++ A+K L D + E F E ++ + P LV+LLG C + +I+
Sbjct: 35 YEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 93
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
E+M G L +L R NR + ++ L +A + A+E+L + IHRD N L
Sbjct: 94 EFMTYGNLLDYL-RECNR-QEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 148
Query: 290 LDQNFRAKVTDFGLAK-MVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGL++ M D + + APE + K + KSDV+++GV+
Sbjct: 149 VGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVL 206
Query: 349 LLELLT 354
L E+ T
Sbjct: 207 LWEIAT 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 94/186 (50%), Gaps = 10/186 (5%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
Y+GV ++ A+K L D + E F E ++ + P LV+LLG C + +I+
Sbjct: 34 YEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 92
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
E+M G L +L R NR + ++ L +A + A+E+L + IHRD N L
Sbjct: 93 EFMTYGNLLDYL-RECNR-QEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 147
Query: 290 LDQNFRAKVTDFGLAK-MVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGL++ M D + + APE + K + KSDV+++GV+
Sbjct: 148 VGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVL 205
Query: 349 LLELLT 354
L E+ T
Sbjct: 206 LWEIAT 211
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 16/191 (8%)
Query: 185 KLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRH 244
K+ ++G E F E ++ L +LV+L G C Q +I+EYM NG L +L
Sbjct: 39 KMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM 98
Query: 245 NNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLA 304
+R++ + L + D A+E+L + +HRD N L++ KV+DFGL+
Sbjct: 99 RHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 152
Query: 305 KMVSDKINGQISTRVLGT---TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
+ V D + S+R G+ + PE K ++KSD++++GV++ E+ + G++P +
Sbjct: 153 RYVLD--DEYTSSR--GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE 208
Query: 361 --PNRPPGEHV 369
N EH+
Sbjct: 209 RFTNSETAEHI 219
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 94/186 (50%), Gaps = 10/186 (5%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
Y+GV ++ A+K L D + E F E ++ + P LV+LLG C + +I+
Sbjct: 30 YEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
E+M G L +L R NR + ++ L +A + A+E+L + IHRD N L
Sbjct: 89 EFMTYGNLLDYL-RECNR-QEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 143
Query: 290 LDQNFRAKVTDFGLAK-MVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGL++ M D + + APE + K + KSDV+++GV+
Sbjct: 144 VGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 349 LLELLT 354
L E+ T
Sbjct: 202 LWEIAT 207
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 8/139 (5%)
Query: 227 LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCS 286
++ EY+ TL+ +H P+ + + + D AL F H++ +IHRD K +
Sbjct: 110 IVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 162
Query: 287 NVLLDQNFRAKVTDFGLAKMVSDKINGQISTR-VLGTTGYLAPEYASTGKLTTKSDVYSY 345
N+++ KV DFG+A+ ++D N T V+GT YL+PE A + +SDVYS
Sbjct: 163 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 222
Query: 346 GVVLLELLTGRVPVDPNRP 364
G VL E+LTG P + P
Sbjct: 223 GCVLYEVLTGEPPFTGDSP 241
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T A+K L + G AF E +L+ +L +LV L Q +I+E
Sbjct: 30 WMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITE 87
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL 290
YM NG+L L + ++ L +A A + F+ E IHRD + +N+L+
Sbjct: 88 YMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIHRDLRAANILV 142
Query: 291 DQNFRAKVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVV 348
K+ DFGLA+++ D + + R + APE + G T KSDV+S+G++
Sbjct: 143 SDTLSCKIADFGLARLIED---AEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 349 LLELLT-GRVP 358
L E++T GR+P
Sbjct: 200 LTEIVTHGRIP 210
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 94/186 (50%), Gaps = 10/186 (5%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
Y+GV ++ A+K L D + E F E ++ + P LV+LLG C + +I+
Sbjct: 32 YEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 90
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
E+M G L +L R NR + ++ L +A + A+E+L + IHRD N L
Sbjct: 91 EFMTYGNLLDYL-RECNR-QEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 145
Query: 290 LDQNFRAKVTDFGLAK-MVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGL++ M D + + APE + K + KSDV+++GV+
Sbjct: 146 VGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVL 203
Query: 349 LLELLT 354
L E+ T
Sbjct: 204 LWEIAT 209
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T A+K L + G AF E +L+ +L +LV L Q +I+E
Sbjct: 38 WMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITE 95
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL 290
YM NG+L L + ++ L +A A + F+ E IHRD + +N+L+
Sbjct: 96 YMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIHRDLRAANILV 150
Query: 291 DQNFRAKVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVV 348
K+ DFGLA+++ D + + R + APE + G T KSDV+S+G++
Sbjct: 151 SDTLSCKIADFGLARLIEDN---EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 207
Query: 349 LLELLT-GRVP 358
L E++T GR+P
Sbjct: 208 LTEIVTHGRIP 218
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 94/186 (50%), Gaps = 10/186 (5%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
Y+GV ++ A+K L D + E F E ++ + P LV+LLG C + +I+
Sbjct: 30 YEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
E+M G L +L R NR + ++ L +A + A+E+L + IHRD N L
Sbjct: 89 EFMTYGNLLDYL-RECNR-QEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 143
Query: 290 LDQNFRAKVTDFGLAK-MVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGL++ M D + + APE + K + KSDV+++GV+
Sbjct: 144 VGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 349 LLELLT 354
L E+ T
Sbjct: 202 LWEIAT 207
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 121/268 (45%), Gaps = 30/268 (11%)
Query: 178 GTVAAIKKLHRD-GKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHR--LLISEYMPN 234
G + A+K L G Q ++ E+++L L+ +V+ G C DQ + L+ EY+P
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 97
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
G+L+ +L RH L L+ A + +LH IHR NVLLD +
Sbjct: 98 GSLRDYLPRHCVGLAQL-----LLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDR 149
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVL----GTTGYLAPEYASTGKLTTKSDVYSYGVVLL 350
K+ DFGLAK V + G RV + APE K SDV+S+GV L
Sbjct: 150 LVKIGDFGLAKAVPE---GHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLY 206
Query: 351 ELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQ-YPKKDLXXXXXXXX 409
ELLT D N+ P H + + + + + + +G+ P+ D
Sbjct: 207 ELLT---YCDSNQSP--HTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHL 261
Query: 410 V--CVQPEAAYRPLMTDVVQSLIPVVKN 435
+ C + EA++RP Q+L+P+++
Sbjct: 262 MKNCWETEASFRP----TFQNLVPILQT 285
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T A+K L + G AF E +L+ +L +LV L Q +I+E
Sbjct: 40 WMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITE 97
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL 290
YM NG+L L + ++ L +A A + F+ E IHRD + +N+L+
Sbjct: 98 YMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIHRDLRAANILV 152
Query: 291 DQNFRAKVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVV 348
K+ DFGLA+++ D + + R + APE + G T KSDV+S+G++
Sbjct: 153 SDTLSCKIADFGLARLIEDN---EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 209
Query: 349 LLELLT-GRVP 358
L E++T GR+P
Sbjct: 210 LTEIVTHGRIP 220
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 121/268 (45%), Gaps = 30/268 (11%)
Query: 178 GTVAAIKKLHRD-GKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHR--LLISEYMPN 234
G + A+K L G Q ++ E+++L L+ +V+ G C DQ + L+ EY+P
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 96
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
G+L+ +L RH L L+ A + +LH IHR NVLLD +
Sbjct: 97 GSLRDYLPRHCVGLAQL-----LLFAQQICEGMAYLHAQH---YIHRALAARNVLLDNDR 148
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVL----GTTGYLAPEYASTGKLTTKSDVYSYGVVLL 350
K+ DFGLAK V + G RV + APE K SDV+S+GV L
Sbjct: 149 LVKIGDFGLAKAVPE---GHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLY 205
Query: 351 ELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQ-YPKKDLXXXXXXXX 409
ELLT D N+ P H + + + + + + +G+ P+ D
Sbjct: 206 ELLT---YCDSNQSP--HTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHL 260
Query: 410 V--CVQPEAAYRPLMTDVVQSLIPVVKN 435
+ C + EA++RP Q+L+P+++
Sbjct: 261 MKNCWETEASFRP----TFQNLVPILQT 284
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T A+K L + G AF E +L+ +L +LV L Q +I+E
Sbjct: 36 WMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITE 93
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL 290
YM NG+L L + ++ L +A A + F+ E IHRD + +N+L+
Sbjct: 94 YMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIHRDLRAANILV 148
Query: 291 DQNFRAKVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVV 348
K+ DFGLA+++ D + + R + APE + G T KSDV+S+G++
Sbjct: 149 SDTLSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 205
Query: 349 LLELLT-GRVP 358
L E++T GR+P
Sbjct: 206 LTEIVTHGRIP 216
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 94/186 (50%), Gaps = 10/186 (5%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
Y+GV ++ A+K L D + E F E ++ + P LV+LLG C + +I+
Sbjct: 32 YEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 90
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
E+M G L +L R NR + ++ L +A + A+E+L + IHRD N L
Sbjct: 91 EFMTYGNLLDYL-RECNR-QEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 145
Query: 290 LDQNFRAKVTDFGLAK-MVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGL++ M D + + APE + K + KSDV+++GV+
Sbjct: 146 VGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVL 203
Query: 349 LLELLT 354
L E+ T
Sbjct: 204 LWEIAT 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 94/186 (50%), Gaps = 10/186 (5%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
Y+GV ++ A+K L D + E F E ++ + P LV+LLG C + +I+
Sbjct: 43 YEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 101
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
E+M G L +L R NR + ++ L +A + A+E+L + IHRD N L
Sbjct: 102 EFMTYGNLLDYL-RECNR-QEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 156
Query: 290 LDQNFRAKVTDFGLAK-MVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGL++ M D + + APE + K + KSDV+++GV+
Sbjct: 157 VGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVL 214
Query: 349 LLELLT 354
L E+ T
Sbjct: 215 LWEIAT 220
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T A+K L + G AF E +L+ +L +LV L Q +I+E
Sbjct: 30 WMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITE 87
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL 290
YM NG+L L + ++ L +A A + F+ E IHRD + +N+L+
Sbjct: 88 YMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIHRDLRAANILV 142
Query: 291 DQNFRAKVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVV 348
K+ DFGLA+++ D + + R + APE + G T KSDV+S+G++
Sbjct: 143 SDTLSCKIADFGLARLIEDN---EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 349 LLELLT-GRVP 358
L E++T GR+P
Sbjct: 200 LTEIVTHGRIP 210
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 122/279 (43%), Gaps = 45/279 (16%)
Query: 171 YKGVLSDGTV-----AAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCADQNH 224
YKG+L + AIK L +++R F E ++ + ++ L G +
Sbjct: 61 YKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 120
Query: 225 RLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIAL-DCAMALEFLHEHATPPVIHRDF 283
++I+EYM NG L + L + + L +L+ L A +++L A +HRD
Sbjct: 121 MMIITEYMENGALDKFLREKDGEFSVL----QLVGMLRGIAAGMKYL---ANMNYVHRDL 173
Query: 284 KCSNVLLDQNFRAKVTDFGLAKMVSDK-------INGQISTRVLGTTGYLAPEYASTGKL 336
N+L++ N KV+DFGL++++ D G+I R + APE S K
Sbjct: 174 AARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR------WTAPEAISYRKF 227
Query: 337 TTKSDVYSYGVVLLELLT-GRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQ 395
T+ SDV+S+G+V+ E++T G P W L S E ++ ++ +
Sbjct: 228 TSASDVWSFGIVMWEVMTYGERPY-------------WEL----SNHEVMKAINDGFRLP 270
Query: 396 YPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQSLIPVVK 434
P C Q E A RP D+V L +++
Sbjct: 271 TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T A+K L + G AF E +L+ +L +LV L Q +I+E
Sbjct: 39 WMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITE 96
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL 290
YM NG+L L + ++ L +A A + F+ E IHRD + +N+L+
Sbjct: 97 YMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIHRDLRAANILV 151
Query: 291 DQNFRAKVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVV 348
K+ DFGLA+++ D + + R + APE + G T KSDV+S+G++
Sbjct: 152 SDTLSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 208
Query: 349 LLELLT-GRVP 358
L E++T GR+P
Sbjct: 209 LTEIVTHGRIP 219
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 95/184 (51%), Gaps = 16/184 (8%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRL-LISEYMPNGT 236
G A+K + D + AF E ++++L LV+LLG ++ L +++EYM G+
Sbjct: 35 GNKVAVKCIKNDATAQ--AFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 92
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
L +L D L +LD A+E+L + +HRD NVL+ ++ A
Sbjct: 93 LVDYLRSRGRSVLGGD--CLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVA 147
Query: 297 KVTDFGLAKMVSD-KINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT- 354
KV+DFGL K S + G++ + + APE +TKSDV+S+G++L E+ +
Sbjct: 148 KVSDFGLTKEASSTQDTGKLPVK------WTAPEALREAAFSTKSDVWSFGILLWEIYSF 201
Query: 355 GRVP 358
GRVP
Sbjct: 202 GRVP 205
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 102/201 (50%), Gaps = 18/201 (8%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
Y+GV ++ A+K L D + E F E ++ + P LV+LLG C + +I
Sbjct: 28 YEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIII 86
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
E+M G L +L R NR + + L +A + A+E+L + IHRD N L
Sbjct: 87 EFMTYGNLLDYL-RECNR-QEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 141
Query: 290 LDQNFRAKVTDFGLAKMVSDKINGQISTRVLGT---TGYLAPEYASTGKLTTKSDVYSYG 346
+ +N KV DFGL+++++ G T G + APE + K + KSDV+++G
Sbjct: 142 VGENHLVKVADFGLSRLMT----GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 197
Query: 347 VVLLELLT-GRVP---VDPNR 363
V+L E+ T G P +DP++
Sbjct: 198 VLLWEIATYGMSPYPGIDPSQ 218
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 89/194 (45%), Gaps = 15/194 (7%)
Query: 177 DGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT 236
D + A+K L + + F+ E +LL+ L +V G C + L++ EYM +G
Sbjct: 70 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 129
Query: 237 LQQHLHRHNNRYR-----------PLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKC 285
L + L H + PL L +A A + +L A +HRD
Sbjct: 130 LNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLAT 186
Query: 286 SNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSY 345
N L+ Q K+ DFG+++ + ++ R + ++ PE K TT+SDV+S+
Sbjct: 187 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSF 246
Query: 346 GVVLLELLT-GRVP 358
GVVL E+ T G+ P
Sbjct: 247 GVVLWEIFTYGKQP 260
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T A+K L + G AF E +L+ +L +LV L Q +I+E
Sbjct: 36 WMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITE 93
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL 290
YM NG+L L + ++ L +A A + F+ E IHRD + +N+L+
Sbjct: 94 YMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIHRDLRAANILV 148
Query: 291 DQNFRAKVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVV 348
K+ DFGLA+++ D + + R + APE + G T KSDV+S+G++
Sbjct: 149 SDTLSCKIADFGLARLIED---NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 205
Query: 349 LLELLT-GRVP 358
L E++T GR+P
Sbjct: 206 LTEIVTHGRIP 216
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 96/191 (50%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T AIK L + G AF E ++ +L +LV+L +++ ++ E
Sbjct: 35 WMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVME 92
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMA-LEFLHEHATPPVIHRDFKCSNVL 289
YM G L L +Y L + + MA +E ++ +HRD + +N+L
Sbjct: 93 YMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN------YVHRDLRAANIL 146
Query: 290 LDQNFRAKVTDFGLAKMVSD-KINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGLA+++ D + + + + APE A G+ T KSDV+S+G++
Sbjct: 147 VGENLVCKVADFGLARLIEDNEYTARQGAKF--PIKWTAPEAALYGRFTIKSDVWSFGIL 204
Query: 349 LLELLT-GRVP 358
L EL T GRVP
Sbjct: 205 LTELTTKGRVP 215
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T A+K L + G AF E +L+ +L +LV L Q +I+E
Sbjct: 32 WMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITE 89
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL 290
YM NG+L L + ++ L +A A + F+ E IHRD + +N+L+
Sbjct: 90 YMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIHRDLRAANILV 144
Query: 291 DQNFRAKVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVV 348
K+ DFGLA+++ D + + R + APE + G T KSDV+S+G++
Sbjct: 145 SDTLSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 201
Query: 349 LLELLT-GRVP 358
L E++T GR+P
Sbjct: 202 LTEIVTHGRIP 212
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T A+K L + G AF E +L+ +L +LV L Q +I+E
Sbjct: 35 WMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITE 92
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL 290
YM NG+L L + ++ L +A A + F+ E IHRD + +N+L+
Sbjct: 93 YMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIHRDLRAANILV 147
Query: 291 DQNFRAKVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVV 348
K+ DFGLA+++ D + + R + APE + G T KSDV+S+G++
Sbjct: 148 SDTLSCKIADFGLARLIED---NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 204
Query: 349 LLELLT-GRVP 358
L E++T GR+P
Sbjct: 205 LTEIVTHGRIP 215
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T A+K L + G AF E +L+ +L +LV L Q +I+E
Sbjct: 31 WMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITE 88
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL 290
YM NG+L L + ++ L +A A + F+ E IHRD + +N+L+
Sbjct: 89 YMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIHRDLRAANILV 143
Query: 291 DQNFRAKVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVV 348
K+ DFGLA+++ D + + R + APE + G T KSDV+S+G++
Sbjct: 144 SDTLSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 200
Query: 349 LLELLT-GRVP 358
L E++T GR+P
Sbjct: 201 LTEIVTHGRIP 211
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 10/186 (5%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
Y+GV ++ A+K L D + E F E ++ + P LV+LLG C + +I+
Sbjct: 35 YEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 93
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
E+M G L +L R NR + + L +A + A+E+L + IHRD N L
Sbjct: 94 EFMTYGNLLDYL-RECNR-QEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 148
Query: 290 LDQNFRAKVTDFGLAK-MVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGL++ M D + + APE + K + KSDV+++GV+
Sbjct: 149 VGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVL 206
Query: 349 LLELLT 354
L E+ T
Sbjct: 207 LWEIAT 212
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T A+K L + G AF E +L+ +L +LV L Q +I+E
Sbjct: 30 WMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITE 87
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL 290
YM NG+L L + ++ L +A A + F+ E IHRD + +N+L+
Sbjct: 88 YMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIHRDLRAANILV 142
Query: 291 DQNFRAKVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVV 348
K+ DFGLA+++ D + + R + APE + G T KSDV+S+G++
Sbjct: 143 SDTLSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 349 LLELLT-GRVP 358
L E++T GR+P
Sbjct: 200 LTEIVTHGRIP 210
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 10/186 (5%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
Y+GV ++ A+K L D + E F E ++ + P LV+LLG C + +I+
Sbjct: 30 YEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
E+M G L +L R NR + + L +A + A+E+L + IHRD N L
Sbjct: 89 EFMTYGNLLDYL-RECNR-QEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 143
Query: 290 LDQNFRAKVTDFGLAK-MVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGL++ M D + + APE + K + KSDV+++GV+
Sbjct: 144 VGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 349 LLELLT 354
L E+ T
Sbjct: 202 LWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 10/186 (5%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
Y+GV ++ A+K L D + E F E ++ + P LV+LLG C + +I+
Sbjct: 30 YEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
E+M G L +L R NR + + L +A + A+E+L + IHRD N L
Sbjct: 89 EFMTYGNLLDYL-RECNR-QEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 143
Query: 290 LDQNFRAKVTDFGLAK-MVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGL++ M D + + APE + K + KSDV+++GV+
Sbjct: 144 VGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 349 LLELLT 354
L E+ T
Sbjct: 202 LWEIAT 207
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T A+K L + G AF E +L+ +L +LV L Q +I+E
Sbjct: 30 WMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITE 87
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL 290
YM NG+L L + ++ L +A A + F+ E IHRD + +N+L+
Sbjct: 88 YMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEERN---YIHRDLRAANILV 142
Query: 291 DQNFRAKVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVV 348
K+ DFGLA+++ D + + R + APE + G T KSDV+S+G++
Sbjct: 143 SDTLSCKIADFGLARLIED---NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 349 LLELLT-GRVP 358
L E++T GR+P
Sbjct: 200 LTEIVTHGRIP 210
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 94/186 (50%), Gaps = 10/186 (5%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
Y+GV ++ A+K L D + E F E ++ + P LV+LLG C + +I+
Sbjct: 276 YEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 334
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
E+M G L +L R NR + ++ L +A + A+E+L + IHR+ N L
Sbjct: 335 EFMTYGNLLDYL-RECNR-QEVNAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCL 389
Query: 290 LDQNFRAKVTDFGLAK-MVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGL++ M D + + APE + K + KSDV+++GV+
Sbjct: 390 VGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVL 447
Query: 349 LLELLT 354
L E+ T
Sbjct: 448 LWEIAT 453
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 15/195 (7%)
Query: 176 SDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNG 235
D + A+K L + + F+ E +LL+ L +V G C + L++ EYM +G
Sbjct: 46 QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 105
Query: 236 TLQQHLHRHNNRYR-----------PLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFK 284
L + L H + PL L +A A + +L A +HRD
Sbjct: 106 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLA 162
Query: 285 CSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYS 344
N L+ Q K+ DFG+++ + ++ R + ++ PE K TT+SDV+S
Sbjct: 163 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWS 222
Query: 345 YGVVLLELLT-GRVP 358
+GVVL E+ T G+ P
Sbjct: 223 FGVVLWEIFTYGKQP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 15/195 (7%)
Query: 176 SDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNG 235
D + A+K L + + F+ E +LL+ L +V G C + L++ EYM +G
Sbjct: 40 QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 99
Query: 236 TLQQHLHRHNNRYR-----------PLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFK 284
L + L H + PL L +A A + +L A +HRD
Sbjct: 100 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLA 156
Query: 285 CSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYS 344
N L+ Q K+ DFG+++ + ++ R + ++ PE K TT+SDV+S
Sbjct: 157 TRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWS 216
Query: 345 YGVVLLELLT-GRVP 358
+GVVL E+ T G+ P
Sbjct: 217 FGVVLWEIFTYGKQP 231
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T A+K L + G AF E +L+ +L +LV L Q +I+E
Sbjct: 25 WMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITE 82
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL 290
YM NG+L L + L L +A A + F+ E IHRD + +N+L+
Sbjct: 83 YMENGSLVDFLKTPSGI--KLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILV 137
Query: 291 DQNFRAKVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVV 348
K+ DFGLA+++ D + + R + APE + G T KSDV+S+G++
Sbjct: 138 SDTLSCKIADFGLARLIEDN---EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 194
Query: 349 LLELLT-GRVP 358
L E++T GR+P
Sbjct: 195 LTEIVTHGRIP 205
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 96/188 (51%), Gaps = 14/188 (7%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
Y+GV ++ A+K L D + E F E ++ + P LV+LLG C + +I
Sbjct: 31 YEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIII 89
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
E+M G L +L R NR + ++ L +A + A+E+L + IHRD N L
Sbjct: 90 EFMTYGNLLDYL-RECNR-QEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 144
Query: 290 LDQNFRAKVTDFGLAKMVSDKINGQISTRVLGT---TGYLAPEYASTGKLTTKSDVYSYG 346
+ +N KV DFGL+++++ G T G + APE + K + KSDV+++G
Sbjct: 145 VGENHLVKVADFGLSRLMT----GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 200
Query: 347 VVLLELLT 354
V+L E+ T
Sbjct: 201 VLLWEIAT 208
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 94/186 (50%), Gaps = 10/186 (5%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
Y+GV ++ A+K L D + E F E ++ + P LV+LLG C + +I+
Sbjct: 234 YEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 292
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
E+M G L +L R NR + ++ L +A + A+E+L + IHR+ N L
Sbjct: 293 EFMTYGNLLDYL-RECNR-QEVNAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCL 347
Query: 290 LDQNFRAKVTDFGLAK-MVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGL++ M D + + APE + K + KSDV+++GV+
Sbjct: 348 VGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVL 405
Query: 349 LLELLT 354
L E+ T
Sbjct: 406 LWEIAT 411
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 19/199 (9%)
Query: 178 GTVAAIKKLHRD--GKQRERAFRMEVDLLSRLHSPQLV------ELLGYCADQNHRLLIS 229
G AIK+ ++ K RER + +E+ ++ +L+ P +V + L A + LL
Sbjct: 40 GEQVAIKQCRQELSPKNRER-WCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAM 98
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
EY G L+++L++ N + R +++ D + AL +LHE+ +IHRD K N++
Sbjct: 99 EYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSALRYLHENR---IIHRDLKPENIV 154
Query: 290 LD---QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYG 346
L Q K+ D G AK + G++ T +GT YLAPE K T D +S+G
Sbjct: 155 LQPGPQRLIHKIIDLGYAKELD---QGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFG 211
Query: 347 VVLLELLTGRVPVDPNRPP 365
+ E +TG P PN P
Sbjct: 212 TLAFECITGFRPFLPNWQP 230
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 19/199 (9%)
Query: 178 GTVAAIKKLHRD--GKQRERAFRMEVDLLSRLHSPQLV------ELLGYCADQNHRLLIS 229
G AIK+ ++ K RER + +E+ ++ +L+ P +V + L A + LL
Sbjct: 39 GEQVAIKQCRQELSPKNRER-WCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAM 97
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
EY G L+++L++ N + R +++ D + AL +LHE+ +IHRD K N++
Sbjct: 98 EYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSALRYLHENR---IIHRDLKPENIV 153
Query: 290 LD---QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYG 346
L Q K+ D G AK + G++ T +GT YLAPE K T D +S+G
Sbjct: 154 LQPGPQRLIHKIIDLGYAKELD---QGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFG 210
Query: 347 VVLLELLTGRVPVDPNRPP 365
+ E +TG P PN P
Sbjct: 211 TLAFECITGFRPFLPNWQP 229
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 91/186 (48%), Gaps = 10/186 (5%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
Y GV ++ A+K L D + E F E ++ + P LV+LLG C + +++
Sbjct: 49 YVGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVT 107
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
EYMP G L +L R NR + L +A + A+E+L + IHRD N L
Sbjct: 108 EYMPYGNLLDYL-RECNR-EEVTAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 162
Query: 290 LDQNFRAKVTDFGLAK-MVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGL++ M D + + APE + + KSDV+++GV+
Sbjct: 163 VGENHVVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNTFSIKSDVWAFGVL 220
Query: 349 LLELLT 354
L E+ T
Sbjct: 221 LWEIAT 226
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 10/186 (5%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
Y+GV ++ A+K L D + E F E ++ + P LV+LLG C + +I
Sbjct: 35 YEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIII 93
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
E+M G L +L R NR + ++ L +A + A+E+L + IHRD N L
Sbjct: 94 EFMTYGNLLDYL-RECNR-QEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 148
Query: 290 LDQNFRAKVTDFGLAK-MVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGL++ M D + + APE + K + KSDV+++GV+
Sbjct: 149 VGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVL 206
Query: 349 LLELLT 354
L E+ T
Sbjct: 207 LWEIAT 212
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 93/186 (50%), Gaps = 10/186 (5%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
Y+GV ++ A+K L D + E F E ++ + P LV+LLG C + +I+
Sbjct: 237 YEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
E+M G L +L R NR + + L +A + A+E+L + IHR+ N L
Sbjct: 296 EFMTYGNLLDYL-RECNR-QEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCL 350
Query: 290 LDQNFRAKVTDFGLAK-MVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGL++ M D + + APE + K + KSDV+++GV+
Sbjct: 351 VGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVL 408
Query: 349 LLELLT 354
L E+ T
Sbjct: 409 LWEIAT 414
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 89/166 (53%), Gaps = 10/166 (6%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
KQR R F E ++ + P ++ L G ++I+EYM NG+L L +++ R+
Sbjct: 72 KQR-RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV 130
Query: 251 LDWRTRLIIAL-DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSD 309
+ +L+ L +++L + + +HRD N+L++ N KV+DFG+++++ D
Sbjct: 131 I----QLVGMLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSRVLED 183
Query: 310 KINGQISTRVLGT-TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
+TR + APE + K T+ SDV+SYG+V+ E+++
Sbjct: 184 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 28/248 (11%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
KQR R F E ++ + P ++ L G ++++E M NG+L L +H+ ++
Sbjct: 88 KQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV 146
Query: 251 LDWRTRLIIAL-DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSD 309
+ +L+ L A +++L + +HRD N+L++ N KV+DFGL++++ D
Sbjct: 147 I----QLVGMLRGIASGMKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 310 KINGQISTRVLGT-TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVDPNRPPGE 367
+TR + +PE + K T+ SDV+SYG+VL E+++ G P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------- 251
Query: 368 HVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQ 427
W + S ++ ++ VD + P C Q + RP +V
Sbjct: 252 -----WEM----SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
Query: 428 SLIPVVKN 435
L +++N
Sbjct: 303 ILDKLIRN 310
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 92/179 (51%), Gaps = 12/179 (6%)
Query: 181 AAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
AIK L +++R F E ++ + P ++ L G ++I+E+M NG+L
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 240 HLHRHNNRYRPLDWRTRLIIAL-DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKV 298
L +++ ++ + +L+ L A +++L A +HRD N+L++ N KV
Sbjct: 124 FLRQNDGQFTVI----QLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKV 176
Query: 299 TDFGLAKMVSDKINGQISTRVLGT---TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
+DFGL++ + D + T LG + APE K T+ SDV+SYG+V+ E+++
Sbjct: 177 SDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 10/186 (5%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
Y+GV ++ A+K L D + E F E ++ + P LV+LLG C + +I
Sbjct: 30 YEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIII 88
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
E+M G L +L R NR + + L +A + A+E+L + IHRD N L
Sbjct: 89 EFMTYGNLLDYL-RECNR-QEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 143
Query: 290 LDQNFRAKVTDFGLAK-MVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGL++ M D + + APE + K + KSDV+++GV+
Sbjct: 144 VGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 349 LLELLT 354
L E+ T
Sbjct: 202 LWEIAT 207
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 10/186 (5%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
Y+GV ++ A+K L D + E F E ++ + P LV+LLG C + +I
Sbjct: 30 YEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIII 88
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
E+M G L +L R NR + + L +A + A+E+L + IHRD N L
Sbjct: 89 EFMTYGNLLDYL-RECNR-QEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCL 143
Query: 290 LDQNFRAKVTDFGLAK-MVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ +N KV DFGL++ M D + + APE + K + KSDV+++GV+
Sbjct: 144 VGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGVL 201
Query: 349 LLELLT 354
L E+ T
Sbjct: 202 LWEIAT 207
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 28/248 (11%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
KQR R F E ++ + P ++ L G ++++E M NG+L L +H+ ++
Sbjct: 88 KQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV 146
Query: 251 LDWRTRLIIAL-DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSD 309
+ +L+ L A +++L + +HRD N+L++ N KV+DFGL++++ D
Sbjct: 147 I----QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 310 KINGQISTRVLGT-TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVDPNRPPGE 367
+TR + +PE + K T+ SDV+SYG+VL E+++ G P
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY-------- 251
Query: 368 HVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQ 427
W + S ++ ++ VD + P C Q + RP +V
Sbjct: 252 -----WEM----SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
Query: 428 SLIPVVKN 435
L +++N
Sbjct: 303 ILDKLIRN 310
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 14/188 (7%)
Query: 181 AAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCA-DQNHRLLISEYMPNGTLQ 238
A+K L+R E + F E ++ P ++ LLG C + L++ YM +G L+
Sbjct: 120 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 179
Query: 239 QHLHR--HNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ HN + L + L A ++FL A+ +HRD N +LD+ F
Sbjct: 180 NFIRNETHNPTVKDL-----IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTV 231
Query: 297 KVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
KV DFGLA+ + DK + + ++A E T K TTKSDV+S+GV+L EL+T
Sbjct: 232 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291
Query: 355 GRVPVDPN 362
P P+
Sbjct: 292 RGAPPYPD 299
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 14/188 (7%)
Query: 181 AAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCA-DQNHRLLISEYMPNGTLQ 238
A+K L+R E + F E ++ P ++ LLG C + L++ YM +G L+
Sbjct: 61 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 120
Query: 239 QHLHR--HNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ HN + L + L A ++FL A+ +HRD N +LD+ F
Sbjct: 121 NFIRNETHNPTVKDL-----IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTV 172
Query: 297 KVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
KV DFGLA+ + DK + + ++A E T K TTKSDV+S+GV+L EL+T
Sbjct: 173 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
Query: 355 GRVPVDPN 362
P P+
Sbjct: 233 RGAPPYPD 240
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 14/188 (7%)
Query: 181 AAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCA-DQNHRLLISEYMPNGTLQ 238
A+K L+R E + F E ++ P ++ LLG C + L++ YM +G L+
Sbjct: 61 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 120
Query: 239 QHLHR--HNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ HN + L + L A ++FL A+ +HRD N +LD+ F
Sbjct: 121 NFIRNETHNPTVKDL-----IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTV 172
Query: 297 KVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
KV DFGLA+ + DK + + ++A E T K TTKSDV+S+GV+L EL+T
Sbjct: 173 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
Query: 355 GRVPVDPN 362
P P+
Sbjct: 233 RGAPPYPD 240
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 14/188 (7%)
Query: 181 AAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCA-DQNHRLLISEYMPNGTLQ 238
A+K L+R E + F E ++ P ++ LLG C + L++ YM +G L+
Sbjct: 66 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 125
Query: 239 QHLHR--HNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ HN + L + L A ++FL A+ +HRD N +LD+ F
Sbjct: 126 NFIRNETHNPTVKDL-----IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTV 177
Query: 297 KVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
KV DFGLA+ + DK + + ++A E T K TTKSDV+S+GV+L EL+T
Sbjct: 178 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 237
Query: 355 GRVPVDPN 362
P P+
Sbjct: 238 RGAPPYPD 245
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 14/188 (7%)
Query: 181 AAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCA-DQNHRLLISEYMPNGTLQ 238
A+K L+R E + F E ++ P ++ LLG C + L++ YM +G L+
Sbjct: 62 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 121
Query: 239 QHLHR--HNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ HN + L + L A ++FL A+ +HRD N +LD+ F
Sbjct: 122 NFIRNETHNPTVKDL-----IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTV 173
Query: 297 KVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
KV DFGLA+ + DK + + ++A E T K TTKSDV+S+GV+L EL+T
Sbjct: 174 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
Query: 355 GRVPVDPN 362
P P+
Sbjct: 234 RGAPPYPD 241
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T A+K L + G AF E +L+ +L +LV L Q +I+E
Sbjct: 26 WMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYA-VVTQEPIYIITE 83
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL 290
YM NG+L L + L L +A A + F+ E IHR+ + +N+L+
Sbjct: 84 YMENGSLVDFLKTPSGI--KLTINKLLDMAAQIAEGMAFIEERN---YIHRNLRAANILV 138
Query: 291 DQNFRAKVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVV 348
K+ DFGLA+++ D + + R + APE + G T KSDV+S+G++
Sbjct: 139 SDTLSCKIADFGLARLIEDN---EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 195
Query: 349 LLELLT-GRVP 358
L E++T GR+P
Sbjct: 196 LTEIVTHGRIP 206
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 14/188 (7%)
Query: 181 AAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCA-DQNHRLLISEYMPNGTLQ 238
A+K L+R E + F E ++ P ++ LLG C + L++ YM +G L+
Sbjct: 59 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 118
Query: 239 QHLHR--HNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ HN + L + L A ++FL A+ +HRD N +LD+ F
Sbjct: 119 NFIRNETHNPTVKDL-----IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTV 170
Query: 297 KVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
KV DFGLA+ + DK + + ++A E T K TTKSDV+S+GV+L EL+T
Sbjct: 171 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
Query: 355 GRVPVDPN 362
P P+
Sbjct: 231 RGAPPYPD 238
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 88/166 (53%), Gaps = 10/166 (6%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
KQR R F E ++ + P ++ L G ++++E M NG+L L +H+ ++
Sbjct: 59 KQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV 117
Query: 251 LDWRTRLIIAL-DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSD 309
+ +L+ L A +++L + +HRD N+L++ N KV+DFGL++++ D
Sbjct: 118 I----QLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 170
Query: 310 KINGQISTRVLGT-TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
+TR + +PE + K T+ SDV+SYG+VL E+++
Sbjct: 171 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 14/188 (7%)
Query: 181 AAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCA-DQNHRLLISEYMPNGTLQ 238
A+K L+R E + F E ++ P ++ LLG C + L++ YM +G L+
Sbjct: 62 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 121
Query: 239 QHLHR--HNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ HN + L + L A ++FL A+ +HRD N +LD+ F
Sbjct: 122 NFIRNETHNPTVKDL-----IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTV 173
Query: 297 KVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
KV DFGLA+ + DK + + ++A E T K TTKSDV+S+GV+L EL+T
Sbjct: 174 KVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
Query: 355 GRVPVDPN 362
P P+
Sbjct: 234 RGAPPYPD 241
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 89/166 (53%), Gaps = 10/166 (6%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
KQR R F E ++ + P ++ L G ++I+EYM NG+L L +++ R+
Sbjct: 57 KQR-RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV 115
Query: 251 LDWRTRLIIAL-DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSD 309
+ +L+ L +++L + + +HRD N+L++ N KV+DFG+++++ D
Sbjct: 116 I----QLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLED 168
Query: 310 KINGQISTRVLGT-TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
+TR + APE + K T+ SDV+SYG+V+ E+++
Sbjct: 169 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 89/166 (53%), Gaps = 10/166 (6%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
KQR R F E ++ + P ++ L G ++I+EYM NG+L L +++ R+
Sbjct: 51 KQR-RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV 109
Query: 251 LDWRTRLIIAL-DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSD 309
+ +L+ L +++L + + +HRD N+L++ N KV+DFG+++++ D
Sbjct: 110 I----QLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLED 162
Query: 310 KINGQISTRVLGT-TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
+TR + APE + K T+ SDV+SYG+V+ E+++
Sbjct: 163 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 116/250 (46%), Gaps = 28/250 (11%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
KQR R F E ++ + P ++ L G ++++EYM NG+L L +++ ++
Sbjct: 65 KQR-RDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV 123
Query: 251 LDWRTRLIIAL-DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSD 309
+ +L+ L + +++L + +HRD N+L++ N KV+DFGL++++ D
Sbjct: 124 I----QLVGMLRGISAGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 176
Query: 310 KINGQISTRVLGT-TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVDPNRPPGE 367
+TR + APE + K T+ SDV+SYG+V+ E+++ G P
Sbjct: 177 DPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPY-------- 228
Query: 368 HVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQ 427
W + + ++ ++ V+ + P C Q E RP ++V
Sbjct: 229 -----WEM----TNQDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVN 279
Query: 428 SLIPVVKNNA 437
L +++N A
Sbjct: 280 MLDKLIRNPA 289
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 40/254 (15%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
KQR R F E ++ + P +V L G +++ E+M NG L L +H+ ++
Sbjct: 86 KQR-RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV 144
Query: 251 LDWRTRLIIAL-DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSD 309
+ +L+ L A + +L + +HRD N+L++ N KV+DFGL++++ D
Sbjct: 145 I----QLVGMLRGIAAGMRYLADMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVIED 197
Query: 310 K-------INGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVDP 361
G+I R + APE K T+ SDV+SYG+V+ E+++ G P
Sbjct: 198 DPEAVYTTTGGKIPVR------WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY-- 249
Query: 362 NRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPL 421
W + S ++ ++ ++ + P C Q E A RP
Sbjct: 250 -----------WDM----SNQDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPK 294
Query: 422 MTDVVQSLIPVVKN 435
+V L +++N
Sbjct: 295 FEQIVGILDKMIRN 308
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 13/191 (6%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G + T AIK L + G +F E ++ +L +LV+L +++ +++E
Sbjct: 26 WMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEEPI-YIVTE 83
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL 290
YM G+L L + R L + +A A + ++ IHRD + +N+L+
Sbjct: 84 YMNKGSLLDFLK--DGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILV 138
Query: 291 DQNFRAKVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVV 348
K+ DFGLA+++ D + + R + APE A G+ T KSDV+S+G++
Sbjct: 139 GNGLICKIADFGLARLIEDN---EXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL 195
Query: 349 LLELLT-GRVP 358
L EL+T GRVP
Sbjct: 196 LTELVTKGRVP 206
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 92/181 (50%), Gaps = 12/181 (6%)
Query: 179 TVAAIKKLHRDGKQRER-AFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTL 237
+ AIK L +R+R F E ++ + P ++ L G + ++++E+M NG L
Sbjct: 45 SCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL 104
Query: 238 QQHLHRHNNRYRPLDWRTRLIIAL-DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
L ++ ++ + +L+ L A + +L E + +HRD N+L++ N
Sbjct: 105 DSFLRLNDGQFTVI----QLVGMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVC 157
Query: 297 KVTDFGLAKMVSDKINGQISTRVLGT---TGYLAPEYASTGKLTTKSDVYSYGVVLLELL 353
KV+DFGL++ + + + T LG + APE + K T+ SD +SYG+V+ E++
Sbjct: 158 KVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 217
Query: 354 T 354
+
Sbjct: 218 S 218
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 93/171 (54%), Gaps = 12/171 (7%)
Query: 192 QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPL 251
Q+ +AF+ EV +L + ++ +GY + + +++++ +L HLH ++ +
Sbjct: 51 QQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI 109
Query: 252 DWRTRLI-IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDK 310
+LI IA A +++LH + +IHRD K +N+ L ++ K+ DFGLA + S
Sbjct: 110 ----KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 162
Query: 311 INGQISTRVLGTTGYLAPE---YASTGKLTTKSDVYSYGVVLLELLTGRVP 358
++ G+ ++APE + +SDVY++G+VL EL+TG++P
Sbjct: 163 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 26/191 (13%)
Query: 181 AAIKKLHR-DGKQRERAFRMEVDLLSRL-HSPQLVELLGYCADQNHRLLISEYMPNGTLQ 238
AAIK++ K R F E+++L +L H P ++ LLG C + + L EY P+G L
Sbjct: 45 AAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLL 104
Query: 239 QHLHRH------------NNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCS 286
L + N+ L + L A D A +++L + IHRD
Sbjct: 105 DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAAR 161
Query: 287 NVLLDQNFRAKVTDFGLAK---MVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVY 343
N+L+ +N+ AK+ DFGL++ + K G++ R ++A E + TT SDV+
Sbjct: 162 NILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR------WMAIESLNYSVYTTNSDVW 215
Query: 344 SYGVVLLELLT 354
SYGV+L E+++
Sbjct: 216 SYGVLLWEIVS 226
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 93/171 (54%), Gaps = 12/171 (7%)
Query: 192 QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPL 251
Q+ +AF+ EV +L + ++ +GY + + +++++ +L HLH ++ +
Sbjct: 51 QQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI 109
Query: 252 DWRTRLI-IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDK 310
+LI IA A +++LH + +IHRD K +N+ L ++ K+ DFGLA + S
Sbjct: 110 ----KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 162
Query: 311 INGQISTRVLGTTGYLAPE---YASTGKLTTKSDVYSYGVVLLELLTGRVP 358
++ G+ ++APE + +SDVY++G+VL EL+TG++P
Sbjct: 163 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 192 QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPL 251
Q+ +AF+ EV +L + ++ +GY + + +++++ +L HLH ++
Sbjct: 50 QQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHASETKF--- 105
Query: 252 DWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKI 311
+ + + IA A +++LH + +IHRD K +N+ L ++ K+ DFGLA + S
Sbjct: 106 EMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWS 162
Query: 312 NGQISTRVLGTTGYLAPE---YASTGKLTTKSDVYSYGVVLLELLTGRVP 358
++ G+ ++APE + + +SDVY++G+VL EL+TG++P
Sbjct: 163 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 93/171 (54%), Gaps = 12/171 (7%)
Query: 192 QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPL 251
Q+ +AF+ EV +L + ++ +GY + + +++++ +L HLH ++ +
Sbjct: 48 QQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI 106
Query: 252 DWRTRLI-IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDK 310
+LI IA A +++LH + +IHRD K +N+ L ++ K+ DFGLA + S
Sbjct: 107 ----KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 159
Query: 311 INGQISTRVLGTTGYLAPE---YASTGKLTTKSDVYSYGVVLLELLTGRVP 358
++ G+ ++APE + +SDVY++G+VL EL+TG++P
Sbjct: 160 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 26/191 (13%)
Query: 181 AAIKKLHR-DGKQRERAFRMEVDLLSRL-HSPQLVELLGYCADQNHRLLISEYMPNGTLQ 238
AAIK++ K R F E+++L +L H P ++ LLG C + + L EY P+G L
Sbjct: 55 AAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLL 114
Query: 239 QHLHRH------------NNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCS 286
L + N+ L + L A D A +++L + IHRD
Sbjct: 115 DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAAR 171
Query: 287 NVLLDQNFRAKVTDFGLAK---MVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVY 343
N+L+ +N+ AK+ DFGL++ + K G++ R ++A E + TT SDV+
Sbjct: 172 NILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR------WMAIESLNYSVYTTNSDVW 225
Query: 344 SYGVVLLELLT 354
SYGV+L E+++
Sbjct: 226 SYGVLLWEIVS 236
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 14/188 (7%)
Query: 181 AAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCA-DQNHRLLISEYMPNGTLQ 238
A+K L+R E + F E ++ P ++ LLG C + L++ YM +G L+
Sbjct: 60 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 119
Query: 239 QHLHR--HNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ HN + L + L A +++L A+ +HRD N +LD+ F
Sbjct: 120 NFIRNETHNPTVKDL-----IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 171
Query: 297 KVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
KV DFGLA+ + DK + + ++A E T K TTKSDV+S+GV+L EL+T
Sbjct: 172 KVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
Query: 355 GRVPVDPN 362
P P+
Sbjct: 232 RGAPPYPD 239
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 93/171 (54%), Gaps = 12/171 (7%)
Query: 192 QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPL 251
Q+ +AF+ EV +L + ++ +GY + + +++++ +L HLH ++ +
Sbjct: 46 QQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI 104
Query: 252 DWRTRLI-IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDK 310
+LI IA A +++LH + +IHRD K +N+ L ++ K+ DFGLA + S
Sbjct: 105 ----KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 157
Query: 311 INGQISTRVLGTTGYLAPE---YASTGKLTTKSDVYSYGVVLLELLTGRVP 358
++ G+ ++APE + +SDVY++G+VL EL+TG++P
Sbjct: 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 90/179 (50%), Gaps = 18/179 (10%)
Query: 182 AIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQH 240
AIK L +R+R F E ++ + P ++ L G ++++EYM NG+L
Sbjct: 81 AIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTF 140
Query: 241 LHRHNNRYRPLDWRTRLIIAL-DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVT 299
L H+ ++ + +L+ L + +L + +HRD NVL+D N KV+
Sbjct: 141 LRTHDGQFTIM----QLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVS 193
Query: 300 DFGLAKMVSDKINGQISTRVLGTTG-----YLAPEYASTGKLTTKSDVYSYGVVLLELL 353
DFGL++++ D + +T T G + APE + ++ SDV+S+GVV+ E+L
Sbjct: 194 DFGLSRVLEDDPDAAXTT----TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 90/179 (50%), Gaps = 18/179 (10%)
Query: 182 AIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQH 240
AIK L +R+R F E ++ + P ++ L G ++++EYM NG+L
Sbjct: 81 AIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTF 140
Query: 241 LHRHNNRYRPLDWRTRLIIAL-DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVT 299
L H+ ++ + +L+ L + +L + +HRD NVL+D N KV+
Sbjct: 141 LRTHDGQFTIM----QLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVS 193
Query: 300 DFGLAKMVSDKINGQISTRVLGTTG-----YLAPEYASTGKLTTKSDVYSYGVVLLELL 353
DFGL++++ D + +T T G + APE + ++ SDV+S+GVV+ E+L
Sbjct: 194 DFGLSRVLEDDPDAAYTT----TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 93/171 (54%), Gaps = 12/171 (7%)
Query: 192 QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPL 251
Q+ +AF+ EV +L + ++ +GY + + +++++ +L HLH ++ +
Sbjct: 74 QQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI 132
Query: 252 DWRTRLI-IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDK 310
+LI IA A +++LH + +IHRD K +N+ L ++ K+ DFGLA + S
Sbjct: 133 ----KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 185
Query: 311 INGQISTRVLGTTGYLAPE---YASTGKLTTKSDVYSYGVVLLELLTGRVP 358
++ G+ ++APE + +SDVY++G+VL EL+TG++P
Sbjct: 186 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 92/181 (50%), Gaps = 12/181 (6%)
Query: 179 TVAAIKKLHRDGKQRER-AFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTL 237
+ AIK L +R+R F E ++ + P ++ L G + ++++E+M NG L
Sbjct: 43 SCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL 102
Query: 238 QQHLHRHNNRYRPLDWRTRLIIAL-DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
L ++ ++ + +L+ L A + +L E + +HRD N+L++ N
Sbjct: 103 DSFLRLNDGQFTVI----QLVGMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVC 155
Query: 297 KVTDFGLAKMVSDKINGQISTRVLGT---TGYLAPEYASTGKLTTKSDVYSYGVVLLELL 353
KV+DFGL++ + + + T LG + APE + K T+ SD +SYG+V+ E++
Sbjct: 156 KVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 215
Query: 354 T 354
+
Sbjct: 216 S 216
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 93/171 (54%), Gaps = 12/171 (7%)
Query: 192 QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPL 251
Q+ +AF+ EV +L + ++ +GY + + +++++ +L HLH ++ +
Sbjct: 73 QQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI 131
Query: 252 DWRTRLI-IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDK 310
+LI IA A +++LH + +IHRD K +N+ L ++ K+ DFGLA + S
Sbjct: 132 ----KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 184
Query: 311 INGQISTRVLGTTGYLAPE---YASTGKLTTKSDVYSYGVVLLELLTGRVP 358
++ G+ ++APE + +SDVY++G+VL EL+TG++P
Sbjct: 185 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 92/170 (54%), Gaps = 10/170 (5%)
Query: 192 QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPL 251
Q+ +AF+ EV +L + ++ +GY + + +++++ +L HLH ++
Sbjct: 62 QQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHASETKF--- 117
Query: 252 DWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKI 311
+ + + IA A +++LH + +IHRD K +N+ L ++ K+ DFGLA S
Sbjct: 118 EMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS 174
Query: 312 NGQISTRVLGTTGYLAPE---YASTGKLTTKSDVYSYGVVLLELLTGRVP 358
++ G+ ++APE + + +SDVY++G+VL EL+TG++P
Sbjct: 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 13/193 (6%)
Query: 176 SDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNG 235
D + A+K L + F E +LL+ L +V+ G C + + +++ EYM +G
Sbjct: 41 QDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHG 100
Query: 236 TLQQHLHRHN---------NRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCS 286
L + L H N L L IA A + +L A+ +HRD
Sbjct: 101 DLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATR 157
Query: 287 NVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYG 346
N L+ +N K+ DFG+++ V ++ + ++ PE K TT+SDV+S G
Sbjct: 158 NCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLG 217
Query: 347 VVLLELLT-GRVP 358
VVL E+ T G+ P
Sbjct: 218 VVLWEIFTYGKQP 230
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 92/171 (53%), Gaps = 12/171 (7%)
Query: 192 QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPL 251
Q+ +AF+ EV +L + ++ +GY + +++++ +L HLH ++ +
Sbjct: 46 QQLQAFKNEVGVLRKTRHVNILLFMGY-STAPQLAIVTQWCEGSSLYHHLHIIETKFEMI 104
Query: 252 DWRTRLI-IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDK 310
+LI IA A +++LH + +IHRD K +N+ L ++ K+ DFGLA + S
Sbjct: 105 ----KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 157
Query: 311 INGQISTRVLGTTGYLAPE---YASTGKLTTKSDVYSYGVVLLELLTGRVP 358
++ G+ ++APE + +SDVY++G+VL EL+TG++P
Sbjct: 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 95/190 (50%), Gaps = 18/190 (9%)
Query: 181 AAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCA-DQNHRLLISEYMPNGTLQ 238
A+K L+R E + F E ++ P ++ LLG C + L++ YM +G L+
Sbjct: 61 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 120
Query: 239 QHLHR--HNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ HN + L + L A +++L A+ +HRD N +LD+ F
Sbjct: 121 NFIRNETHNPTVKDL-----IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 172
Query: 297 KVTDFGLAKMVSDK----INGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
KV DFGLA+ + DK ++ + ++ ++A E T K TTKSDV+S+GV+L EL
Sbjct: 173 KVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESLQTQKFTTKSDVWSFGVLLWEL 230
Query: 353 LTGRVPVDPN 362
+T P P+
Sbjct: 231 MTRGAPPYPD 240
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 14/188 (7%)
Query: 181 AAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCA-DQNHRLLISEYMPNGTLQ 238
A+K L+R E + F E ++ P ++ LLG C + L++ YM +G L+
Sbjct: 59 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 118
Query: 239 QHLHR--HNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ HN + L + L A +++L A+ +HRD N +LD+ F
Sbjct: 119 NFIRNETHNPTVKDL-----IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 170
Query: 297 KVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
KV DFGLA+ + DK + + ++A E T K TTKSDV+S+GV+L EL+T
Sbjct: 171 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
Query: 355 GRVPVDPN 362
P P+
Sbjct: 231 RGAPPYPD 238
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 14/188 (7%)
Query: 181 AAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCA-DQNHRLLISEYMPNGTLQ 238
A+K L+R E + F E ++ P ++ LLG C + L++ YM +G L+
Sbjct: 56 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 115
Query: 239 QHLHR--HNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ HN + L + L A +++L A+ +HRD N +LD+ F
Sbjct: 116 NFIRNETHNPTVKDL-----IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 167
Query: 297 KVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
KV DFGLA+ + DK + + ++A E T K TTKSDV+S+GV+L EL+T
Sbjct: 168 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227
Query: 355 GRVPVDPN 362
P P+
Sbjct: 228 RGAPPYPD 235
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 95/190 (50%), Gaps = 18/190 (9%)
Query: 181 AAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCA-DQNHRLLISEYMPNGTLQ 238
A+K L+R E + F E ++ P ++ LLG C + L++ YM +G L+
Sbjct: 79 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 138
Query: 239 QHLHR--HNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ HN + L + L A +++L A+ +HRD N +LD+ F
Sbjct: 139 NFIRNETHNPTVKDL-----IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 190
Query: 297 KVTDFGLAKMVSDK----INGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
KV DFGLA+ + DK ++ + ++ ++A E T K TTKSDV+S+GV+L EL
Sbjct: 191 KVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESLQTQKFTTKSDVWSFGVLLWEL 248
Query: 353 LTGRVPVDPN 362
+T P P+
Sbjct: 249 MTRGAPPYPD 258
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 14/188 (7%)
Query: 181 AAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCA-DQNHRLLISEYMPNGTLQ 238
A+K L+R E + F E ++ P ++ LLG C + L++ YM +G L+
Sbjct: 60 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 119
Query: 239 QHLHR--HNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ HN + L + L A +++L A+ +HRD N +LD+ F
Sbjct: 120 NFIRNETHNPTVKDL-----IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 171
Query: 297 KVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
KV DFGLA+ + DK + + ++A E T K TTKSDV+S+GV+L EL+T
Sbjct: 172 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
Query: 355 GRVPVDPN 362
P P+
Sbjct: 232 RGAPPYPD 239
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 14/188 (7%)
Query: 181 AAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCA-DQNHRLLISEYMPNGTLQ 238
A+K L+R E + F E ++ P ++ LLG C + L++ YM +G L+
Sbjct: 61 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 120
Query: 239 QHLHR--HNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ HN + L + L A +++L A+ +HRD N +LD+ F
Sbjct: 121 NFIRNETHNPTVKDL-----IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 172
Query: 297 KVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
KV DFGLA+ + DK + + ++A E T K TTKSDV+S+GV+L EL+T
Sbjct: 173 KVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
Query: 355 GRVPVDPN 362
P P+
Sbjct: 233 RGAPPYPD 240
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 92/171 (53%), Gaps = 12/171 (7%)
Query: 192 QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPL 251
Q+ +AF+ EV +L + ++ +GY + + +++++ +L HLH ++ +
Sbjct: 46 QQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI 104
Query: 252 DWRTRLI-IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDK 310
+LI IA A +++LH + +IHRD K +N+ L ++ K+ DFGLA S
Sbjct: 105 ----KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRW 157
Query: 311 INGQISTRVLGTTGYLAPE---YASTGKLTTKSDVYSYGVVLLELLTGRVP 358
++ G+ ++APE + +SDVY++G+VL EL+TG++P
Sbjct: 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 95/190 (50%), Gaps = 18/190 (9%)
Query: 181 AAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCA-DQNHRLLISEYMPNGTLQ 238
A+K L+R E + F E ++ P ++ LLG C + L++ YM +G L+
Sbjct: 53 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 112
Query: 239 QHLHR--HNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ HN + L + L A +++L A+ +HRD N +LD+ F
Sbjct: 113 NFIRNETHNPTVKDL-----IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 164
Query: 297 KVTDFGLAKMVSDK----INGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
KV DFGLA+ + DK ++ + ++ ++A E T K TTKSDV+S+GV+L EL
Sbjct: 165 KVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESLQTQKFTTKSDVWSFGVLLWEL 222
Query: 353 LTGRVPVDPN 362
+T P P+
Sbjct: 223 MTRGAPPYPD 232
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 95/190 (50%), Gaps = 18/190 (9%)
Query: 181 AAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCA-DQNHRLLISEYMPNGTLQ 238
A+K L+R E + F E ++ P ++ LLG C + L++ YM +G L+
Sbjct: 58 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 117
Query: 239 QHLHR--HNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ HN + L + L A +++L A+ +HRD N +LD+ F
Sbjct: 118 NFIRNETHNPTVKDL-----IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 169
Query: 297 KVTDFGLAKMVSDK----INGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
KV DFGLA+ + DK ++ + ++ ++A E T K TTKSDV+S+GV+L EL
Sbjct: 170 KVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESLQTQKFTTKSDVWSFGVLLWEL 227
Query: 353 LTGRVPVDPN 362
+T P P+
Sbjct: 228 MTRGAPPYPD 237
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 91/179 (50%), Gaps = 12/179 (6%)
Query: 181 AAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
AIK L +++R F E ++ + P ++ L G ++I+E+M NG+L
Sbjct: 38 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 97
Query: 240 HLHRHNNRYRPLDWRTRLIIAL-DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKV 298
L +++ ++ + +L+ L A +++L A +HR N+L++ N KV
Sbjct: 98 FLRQNDGQFTVI----QLVGMLRGIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKV 150
Query: 299 TDFGLAKMVSDKINGQISTRVLGT---TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
+DFGL++ + D + T LG + APE K T+ SDV+SYG+V+ E+++
Sbjct: 151 SDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 32/201 (15%)
Query: 179 TVAAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTL 237
T+ A+K L + +A F+ E L++ +P +V+LLG CA L+ EYM G L
Sbjct: 78 TMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDL 137
Query: 238 QQHLHRH-------------NNRYR-------PLDWRTRLIIALDCAMALEFLHEHATPP 277
+ L + R R PL +L IA A + +L E
Sbjct: 138 NEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK--- 194
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSD----KINGQISTRVLGTTGYLAPEYAST 333
+HRD N L+ +N K+ DFGL++ + K +G + + ++ PE
Sbjct: 195 FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPI----RWMPPESIFY 250
Query: 334 GKLTTKSDVYSYGVVLLELLT 354
+ TT+SDV++YGVVL E+ +
Sbjct: 251 NRYTTESDVWAYGVVLWEIFS 271
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 95/190 (50%), Gaps = 18/190 (9%)
Query: 181 AAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCA-DQNHRLLISEYMPNGTLQ 238
A+K L+R E + F E ++ P ++ LLG C + L++ YM +G L+
Sbjct: 80 CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR 139
Query: 239 QHLHR--HNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ HN + L + L A +++L A+ +HRD N +LD+ F
Sbjct: 140 NFIRNETHNPTVKDL-----IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTV 191
Query: 297 KVTDFGLAKMVSDK----INGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
KV DFGLA+ + DK ++ + ++ ++A E T K TTKSDV+S+GV+L EL
Sbjct: 192 KVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESLQTQKFTTKSDVWSFGVLLWEL 249
Query: 353 LTGRVPVDPN 362
+T P P+
Sbjct: 250 MTRGAPPYPD 259
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 92/171 (53%), Gaps = 12/171 (7%)
Query: 192 QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPL 251
Q+ +AF+ EV +L + ++ +GY + + +++++ +L HLH ++ +
Sbjct: 74 QQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI 132
Query: 252 DWRTRLI-IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDK 310
+LI IA A +++LH + +IHRD K +N+ L ++ K+ DFGLA S
Sbjct: 133 ----KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRW 185
Query: 311 INGQISTRVLGTTGYLAPE---YASTGKLTTKSDVYSYGVVLLELLTGRVP 358
++ G+ ++APE + +SDVY++G+VL EL+TG++P
Sbjct: 186 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 92/171 (53%), Gaps = 12/171 (7%)
Query: 192 QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPL 251
Q+ +AF+ EV +L + ++ +GY + + +++++ +L HLH ++ +
Sbjct: 66 QQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMI 124
Query: 252 DWRTRLI-IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDK 310
+LI IA A +++LH + +IHRD K +N+ L ++ K+ DFGLA S
Sbjct: 125 ----KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRW 177
Query: 311 INGQISTRVLGTTGYLAPE---YASTGKLTTKSDVYSYGVVLLELLTGRVP 358
++ G+ ++APE + +SDVY++G+VL EL+TG++P
Sbjct: 178 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 91/170 (53%), Gaps = 10/170 (5%)
Query: 192 QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPL 251
Q+ +AF+ EV +L + ++ +GY + +++++ +L HLH ++
Sbjct: 62 QQLQAFKNEVGVLRKTRHVNILLFMGY-STAPQLAIVTQWCEGSSLYHHLHASETKF--- 117
Query: 252 DWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKI 311
+ + + IA A +++LH + +IHRD K +N+ L ++ K+ DFGLA S
Sbjct: 118 EMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS 174
Query: 312 NGQISTRVLGTTGYLAPE---YASTGKLTTKSDVYSYGVVLLELLTGRVP 358
++ G+ ++APE + + +SDVY++G+VL EL+TG++P
Sbjct: 175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 96/196 (48%), Gaps = 22/196 (11%)
Query: 178 GTVAAIKKLHRDGKQRERAF------RMEVDLLSRLHSPQLVELLGYCADQNHRLLISEY 231
G A+K L+R Q+ R+ R E+ L P +++L + + ++ EY
Sbjct: 41 GHKVAVKILNR---QKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEY 97
Query: 232 MPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD 291
+ G L ++ + N R LD + + +++ H H V+HRD K NVLLD
Sbjct: 98 VSGGELFDYICK-NGR---LDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLD 150
Query: 292 QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTT--KSDVYSYGVVL 349
+ AK+ DFGL+ M+SD G+ G+ Y APE S G+L + D++S GV+L
Sbjct: 151 AHMNAKIADFGLSNMMSD---GEFLRXSCGSPNYAAPEVIS-GRLYAGPEVDIWSSGVIL 206
Query: 350 LELLTGRVPVDPNRPP 365
LL G +P D + P
Sbjct: 207 YALLCGTLPFDDDHVP 222
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 26/191 (13%)
Query: 181 AAIKKLHR-DGKQRERAFRMEVDLLSRL-HSPQLVELLGYCADQNHRLLISEYMPNGTLQ 238
AAIK++ K R F E+++L +L H P ++ LLG C + + L EY P+G L
Sbjct: 52 AAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLL 111
Query: 239 QHLHRH------------NNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCS 286
L + N+ L + L A D A +++L + IHR+
Sbjct: 112 DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRNLAAR 168
Query: 287 NVLLDQNFRAKVTDFGLAK---MVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVY 343
N+L+ +N+ AK+ DFGL++ + K G++ R ++A E + TT SDV+
Sbjct: 169 NILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR------WMAIESLNYSVYTTNSDVW 222
Query: 344 SYGVVLLELLT 354
SYGV+L E+++
Sbjct: 223 SYGVLLWEIVS 233
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 11/181 (6%)
Query: 181 AAIKKLH---RDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTL 237
AIK + R+ ++ + F EV S+L +V ++ + + L+ EY+ TL
Sbjct: 39 VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTL 98
Query: 238 QQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAK 297
+++ H PL T + ++ H+ ++HRD K N+L+D N K
Sbjct: 99 SEYIESHG----PLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLK 151
Query: 298 VTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRV 357
+ DFG+AK +S+ Q + VLGT Y +PE A +D+YS G+VL E+L G
Sbjct: 152 IFDFGIAKALSETSLTQ-TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEP 210
Query: 358 P 358
P
Sbjct: 211 P 211
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 95/196 (48%), Gaps = 22/196 (11%)
Query: 178 GTVAAIKKLHRDGKQRERAF------RMEVDLLSRLHSPQLVELLGYCADQNHRLLISEY 231
G A+K L+R Q+ R+ + E+ L P +++L + ++ EY
Sbjct: 36 GHKVAVKILNR---QKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEY 92
Query: 232 MPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD 291
+ G L ++ +H R ++ R L A+++ H H V+HRD K NVLLD
Sbjct: 93 VSGGELFDYICKHG-RVEEMEARRLFQQILS---AVDYCHRHM---VVHRDLKPENVLLD 145
Query: 292 QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTT--KSDVYSYGVVL 349
+ AK+ DFGL+ M+SD G+ G+ Y APE S G+L + D++S GV+L
Sbjct: 146 AHMNAKIADFGLSNMMSD---GEFLRTSCGSPNYAAPEVIS-GRLYAGPEVDIWSCGVIL 201
Query: 350 LELLTGRVPVDPNRPP 365
LL G +P D P
Sbjct: 202 YALLCGTLPFDDEHVP 217
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 94/184 (51%), Gaps = 15/184 (8%)
Query: 179 TVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQ 238
T A+K + + G AF E +++ L +LV+L + +I+E+M G+L
Sbjct: 40 TKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLL 97
Query: 239 QHLHRHNNRYRPLDWRTRLI-IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAK 297
L +PL +LI + A + F+ + IHRD + +N+L+ + K
Sbjct: 98 DFLKSDEGSKQPL---PKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCK 151
Query: 298 VTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT- 354
+ DFGLA+++ D + + R + APE + G T KSDV+S+G++L+E++T
Sbjct: 152 IADFGLARVIED---NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTY 208
Query: 355 GRVP 358
GR+P
Sbjct: 209 GRIP 212
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 95/196 (48%), Gaps = 22/196 (11%)
Query: 178 GTVAAIKKLHRDGKQRERAF------RMEVDLLSRLHSPQLVELLGYCADQNHRLLISEY 231
G A+K L+R Q+ R+ + E+ L P +++L + ++ EY
Sbjct: 36 GHKVAVKILNR---QKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEY 92
Query: 232 MPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD 291
+ G L ++ +H R ++ R L A+++ H H V+HRD K NVLLD
Sbjct: 93 VSGGELFDYICKHG-RVEEMEARRLFQQILS---AVDYCHRHM---VVHRDLKPENVLLD 145
Query: 292 QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTT--KSDVYSYGVVL 349
+ AK+ DFGL+ M+SD G+ G+ Y APE S G+L + D++S GV+L
Sbjct: 146 AHMNAKIADFGLSNMMSD---GEFLRDSCGSPNYAAPEVIS-GRLYAGPEVDIWSCGVIL 201
Query: 350 LELLTGRVPVDPNRPP 365
LL G +P D P
Sbjct: 202 YALLCGTLPFDDEHVP 217
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 16/196 (8%)
Query: 176 SDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNG 235
D + A+K L + F+ E +LL+ L +V+ G C D + +++ EYM +G
Sbjct: 43 KDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHG 102
Query: 236 TLQQHLHRHN-NRYRPLDWRTR-----------LIIALDCAMALEFLHEHATPPVIHRDF 283
L + L H + +D + R L IA A + +L A+ +HRD
Sbjct: 103 DLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDL 159
Query: 284 KCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVY 343
N L+ N K+ DFG+++ V ++ + ++ PE K TT+SDV+
Sbjct: 160 ATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVW 219
Query: 344 SYGVVLLELLT-GRVP 358
S+GV+L E+ T G+ P
Sbjct: 220 SFGVILWEIFTYGKQP 235
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 10/181 (5%)
Query: 178 GTVAAIKKLH-RDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQ--NHRLLISEYMPN 234
G A+K L G + E+++L L+ +V+ G C + N LI E++P+
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
G+L+++L ++ N+ ++ + +L A+ +++L + +HRD NVL++
Sbjct: 110 GSLKEYLPKNKNK---INLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEH 163
Query: 295 RAKVTDFGLAKMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELL 353
+ K+ DFGL K + +DK + + APE K SDV+S+GV L ELL
Sbjct: 164 QVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223
Query: 354 T 354
T
Sbjct: 224 T 224
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 15/197 (7%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G ++ T A+K L + G +AF E +L+ L +LV L + +I+E
Sbjct: 30 WMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITE 88
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLI-IALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
YM G+L L L +LI + A + ++ IHRD + +NVL
Sbjct: 89 YMAKGSLLDFLKSDEGGKVLL---PKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVL 142
Query: 290 LDQNFRAKVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGV 347
+ ++ K+ DFGLA+++ D + + R + APE + G T KSDV+S+G+
Sbjct: 143 VSESLMCKIADFGLARVIED---NEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGI 199
Query: 348 VLLELLT-GRVPVDPNR 363
+L E++T G++P P R
Sbjct: 200 LLYEIVTYGKIPY-PGR 215
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 10/181 (5%)
Query: 178 GTVAAIKKLH-RDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQ--NHRLLISEYMPN 234
G A+K L G + E+++L L+ +V+ G C + N LI E++P+
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
G+L+++L ++ N+ ++ + +L A+ +++L + +HRD NVL++
Sbjct: 98 GSLKEYLPKNKNK---INLKQQLKYAVQICKGMDYL---GSRQYVHRDLAARNVLVESEH 151
Query: 295 RAKVTDFGLAKMV-SDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELL 353
+ K+ DFGL K + +DK + + APE K SDV+S+GV L ELL
Sbjct: 152 QVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 211
Query: 354 T 354
T
Sbjct: 212 T 212
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 94/184 (51%), Gaps = 15/184 (8%)
Query: 179 TVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQ 238
T A+K + + G AF E +++ L +LV+L + +I+E+M G+L
Sbjct: 213 TKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLL 270
Query: 239 QHLHRHNNRYRPLDWRTRLI-IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAK 297
L +PL +LI + A + F+ + IHRD + +N+L+ + K
Sbjct: 271 DFLKSDEGSKQPL---PKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCK 324
Query: 298 VTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT- 354
+ DFGLA+++ D + + R + APE + G T KSDV+S+G++L+E++T
Sbjct: 325 IADFGLARVIED---NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTY 381
Query: 355 GRVP 358
GR+P
Sbjct: 382 GRIP 385
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 12/172 (6%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLIS-EYMPNGTLQQHLHRHNNRYRPLDWRTRLI 258
E D++SRL P V+L +C + +L Y NG L +++ + + D
Sbjct: 87 ERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRF 141
Query: 259 IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTR 318
+ ALE+LH +IHRD K N+LL+++ ++TDFG AK++S + +
Sbjct: 142 YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 198
Query: 319 VLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVL 370
+GT Y++PE + SD+++ G ++ +L+ G + P R E+++
Sbjct: 199 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLI 247
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 10/163 (6%)
Query: 199 MEVDLLSRLHSPQLVELLGYCADQNHRL-LISEYMPNGTLQQHLHRHNNRYRPLDWRTRL 257
+E +L+ L P + L C RL + EY+ G L H+ + P +
Sbjct: 68 VEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEP----QAV 123
Query: 258 IIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIST 317
A + ++ L FLH+ +I+RD K NV+LD K+ DFG+ K ++G +
Sbjct: 124 FYAAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTR 178
Query: 318 RVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVD 360
GT Y+APE + D ++YGV+L E+L G+ P D
Sbjct: 179 EFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 99/219 (45%), Gaps = 19/219 (8%)
Query: 182 AIKKLHRDGKQRER-AFRMEVDLLSRL-HSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
A+K L E+ A E+ ++S L +V LLG C L+I+EY G L
Sbjct: 72 AVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLN 131
Query: 240 HLHRH------NNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQN 293
L R RPL+ R L + A + FL A+ IHRD NVLL
Sbjct: 132 FLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNG 188
Query: 294 FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELL 353
AK+ DFGLA+ + + N + ++APE T +SDV+SYG++L E+
Sbjct: 189 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 248
Query: 354 TGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSL 392
+ + N PG +LV+ +L ++ +M P+
Sbjct: 249 S----LGLNPYPG--ILVNSKFYKLV--KDGYQMAQPAF 279
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 12/192 (6%)
Query: 172 KGVLSDG--TVAAIKKLHRDGKQRER-AFRMEVDLLSRLHSPQLVELLGYCADQNHRLLI 228
KGV+ D T AIK ++ RER F E ++ + +V LLG + L+I
Sbjct: 41 KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 100
Query: 229 SEYMPNGTLQQHLH------RHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRD 282
E M G L+ +L +N P + +A + A + +L+ + +HRD
Sbjct: 101 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRD 157
Query: 283 FKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDV 342
N ++ ++F K+ DFG+ + + + + + L +++PE G TT SDV
Sbjct: 158 LAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDV 217
Query: 343 YSYGVVLLELLT 354
+S+GVVL E+ T
Sbjct: 218 WSFGVVLWEIAT 229
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 99/219 (45%), Gaps = 19/219 (8%)
Query: 182 AIKKLHRDGKQRER-AFRMEVDLLSRL-HSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
A+K L E+ A E+ ++S L +V LLG C L+I+EY G L
Sbjct: 80 AVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLN 139
Query: 240 HLHRH------NNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQN 293
L R RPL+ R L + A + FL A+ IHRD NVLL
Sbjct: 140 FLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNG 196
Query: 294 FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELL 353
AK+ DFGLA+ + + N + ++APE T +SDV+SYG++L E+
Sbjct: 197 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 256
Query: 354 TGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSL 392
+ + N PG +LV+ +L ++ +M P+
Sbjct: 257 S----LGLNPYPG--ILVNSKFYKLV--KDGYQMAQPAF 287
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 12/192 (6%)
Query: 172 KGVLSDG--TVAAIKKLHRDGKQRER-AFRMEVDLLSRLHSPQLVELLGYCADQNHRLLI 228
KGV+ D T AIK ++ RER F E ++ + +V LLG + L+I
Sbjct: 32 KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 91
Query: 229 SEYMPNGTLQQHLH------RHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRD 282
E M G L+ +L +N P + +A + A + +L+ + +HRD
Sbjct: 92 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRD 148
Query: 283 FKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDV 342
N ++ ++F K+ DFG+ + + + + + L +++PE G TT SDV
Sbjct: 149 LAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDV 208
Query: 343 YSYGVVLLELLT 354
+S+GVVL E+ T
Sbjct: 209 WSFGVVLWEIAT 220
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 94/189 (49%), Gaps = 18/189 (9%)
Query: 178 GTVAAIKKLHRDG-KQRERAFRMEVDLLSRLHS-PQLVELLGYCADQNHRLLISEYMPNG 235
G V A+K++ R G K+ + M++D++ + H P +V+ G + E M G
Sbjct: 50 GHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--G 107
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
T + L + P ++ +A+ AL +L E VIHRD K SN+LLD+ +
Sbjct: 108 TCAEKLKKRMQGPIPERILGKMTVAI--VKALYYLKEKHG--VIHRDVKPSNILLDERGQ 163
Query: 296 AKVTDFGLA-KMVSDKINGQISTRVLGTTGYLAPEYASTGKLT-----TKSDVYSYGVVL 349
K+ DFG++ ++V DK R G Y+APE T ++DV+S G+ L
Sbjct: 164 IKLCDFGISGRLVDDKAK----DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISL 219
Query: 350 LELLTGRVP 358
+EL TG+ P
Sbjct: 220 VELATGQFP 228
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 13/170 (7%)
Query: 188 RDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNR 247
+ G+Q +A + + L +V LLG C + +L +++Y+P G+L H+ +H
Sbjct: 71 KSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGA 129
Query: 248 YRP---LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLA 304
P L+W ++ A + +L EH ++HR+ NVLL + +V DFG+A
Sbjct: 130 LGPQLLLNWGVQI------AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVA 180
Query: 305 KMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
++ + + ++A E GK T +SDV+SYGV + EL+T
Sbjct: 181 DLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
E R EV++ S L P ++ L GY D LI EY P GT+ + L + + D
Sbjct: 78 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDE 133
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
+ + A AL + H + VIHRD K N+LL K+ DFG S
Sbjct: 134 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPS 186
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPN 362
T + GT YL PE K D++S GV+ E L G+ P + N
Sbjct: 187 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
E R EV++ S L P ++ L GY D LI EY P GT+ + L + + D
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDE 112
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
+ + A AL + H + VIHRD K N+LL K+ DFG S
Sbjct: 113 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPS 165
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPN 362
T + GT YL PE K D++S GV+ E L G+ P + N
Sbjct: 166 SRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 78/171 (45%), Gaps = 15/171 (8%)
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
E R EV++ S L P ++ L GY D LI EY P GT+ + L + + D
Sbjct: 78 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDE 133
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
+ + A AL + H + VIHRD K N+LL K+ DFG + ++
Sbjct: 134 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHA 184
Query: 314 QISTR--VLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPN 362
S R + GT YL PE K D++S GV+ E L G+ P + N
Sbjct: 185 PSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
E R EV++ S L P ++ L GY D LI EY P GT+ + L + + D
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDE 107
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
+ + A AL + H + VIHRD K N+LL K+ DFG S
Sbjct: 108 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPS 160
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPN 362
T + GT YL PE K D++S GV+ E L G+ P + N
Sbjct: 161 SRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 7/159 (4%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E D++SRL P V+L D Y NG L +++ + + D
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGS----FDETCTRFY 137
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ ALE+LH +IHRD K N+LL+++ ++TDFG AK++S + +
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 194
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
+GT Y++PE + + SD+++ G ++ +L+ G P
Sbjct: 195 VGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 16/225 (7%)
Query: 143 VFTYKELETATENFSEXXXXXXXXXXXXY----KGVLSDG--TVAAIKKLHRDGKQRER- 195
VF E E A E + Y KGV+ D T AIK ++ RER
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 196 AFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLH------RHNNRYR 249
F E ++ + +V LLG + L+I E M G L+ +L +N
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 250 PLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSD 309
P + +A + A + +L+ + +HRD N ++ ++F K+ DFG+ + + +
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 181
Query: 310 KINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
+ + L +++PE G TT SDV+S+GVVL E+ T
Sbjct: 182 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
E R EV++ S L P ++ L GY D LI EY P GT+ + L + + D
Sbjct: 69 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDE 124
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
+ + A AL + H + VIHRD K N+LL K+ DFG S
Sbjct: 125 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPS 177
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPN 362
T + GT YL PE K D++S GV+ E L G+ P + N
Sbjct: 178 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 226
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EYMP G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ KV DFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 13/170 (7%)
Query: 188 RDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNR 247
+ G+Q +A + + L +V LLG C + +L +++Y+P G+L H+ +H
Sbjct: 53 KSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGA 111
Query: 248 YRP---LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLA 304
P L+W ++ A + +L EH ++HR+ NVLL + +V DFG+A
Sbjct: 112 LGPQLLLNWGVQI------AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVA 162
Query: 305 KMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
++ + + ++A E GK T +SDV+SYGV + EL+T
Sbjct: 163 DLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EYMP G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ KV DFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 15/197 (7%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE 230
+ G ++ T A+K L + G +AF E +L+ L +LV L + +I+E
Sbjct: 29 WMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITE 87
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLI-IALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
+M G+L L L +LI + A + ++ IHRD + +NVL
Sbjct: 88 FMAKGSLLDFLKSDEGGKVLL---PKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVL 141
Query: 290 LDQNFRAKVTDFGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGV 347
+ ++ K+ DFGLA+++ D + + R + APE + G T KS+V+S+G+
Sbjct: 142 VSESLMCKIADFGLARVIED---NEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGI 198
Query: 348 VLLELLT-GRVPVDPNR 363
+L E++T G++P P R
Sbjct: 199 LLYEIVTYGKIPY-PGR 214
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 86/188 (45%), Gaps = 18/188 (9%)
Query: 180 VAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT 236
+ A+K L + ++ E R EV++ S L P ++ L GY D LI EY P GT
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGT 94
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ + L + + D + + A AL + H + VIHRD K N+LL
Sbjct: 95 VYRELQKLSK----FDEQRTATYITELANALSYCH---SKKVIHRDIKPENLLLGSAGEL 147
Query: 297 KVTDFGLAKMVSDKINGQISTR--VLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+ DFG + ++ S R + GT YL PE K D++S GV+ E L
Sbjct: 148 KIADFGWS------VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 201
Query: 355 GRVPVDPN 362
G+ P + N
Sbjct: 202 GKPPFEAN 209
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
E R EV++ S L P ++ L GY D LI EY P GT+ + L + + D
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDE 112
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
+ + A AL + H + VIHRD K N+LL K+ DFG S
Sbjct: 113 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPS 165
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPN 362
T + GT YL PE K D++S GV+ E L G+ P + N
Sbjct: 166 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 78/171 (45%), Gaps = 15/171 (8%)
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
E R EV++ S L P ++ L GY D LI EY P GT+ + L + + D
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDE 109
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
+ + A AL + H + VIHRD K N+LL K+ DFG + ++
Sbjct: 110 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHA 160
Query: 314 QISTR--VLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPN 362
S R + GT YL PE K D++S GV+ E L G+ P + N
Sbjct: 161 PSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
E R EV++ S L P ++ L GY D LI EY P GT+ + L + + D
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDE 110
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
+ + A AL + H + VIHRD K N+LL K+ DFG S
Sbjct: 111 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPS 163
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPN 362
T + GT YL PE K D++S GV+ E L G+ P + N
Sbjct: 164 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
E R EV++ S L P ++ L GY D LI EY P GT+ + L + + D
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDE 107
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
+ + A AL + H + VIHRD K N+LL K+ DFG S
Sbjct: 108 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPS 160
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPN 362
T + GT YL PE K D++S GV+ E L G+ P + N
Sbjct: 161 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY P G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+++DQ KVTDFGLAK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
E R EV++ S L P ++ L GY D LI EY P GT+ + L + + D
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDE 112
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
+ + A AL + H + VIHRD K N+LL K+ DFG S
Sbjct: 113 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPS 165
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPN 362
T + GT YL PE K D++S GV+ E L G+ P + N
Sbjct: 166 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
E R EV++ S L P ++ L GY D LI EY P GT+ + L + + D
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDE 108
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
+ + A AL + H + VIHRD K N+LL K+ DFG +
Sbjct: 109 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRT 165
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPN 362
+S GT YL PE K D++S GV+ E L G+ P + N
Sbjct: 166 TLS----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 83/186 (44%), Gaps = 14/186 (7%)
Query: 180 VAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT 236
+ A+K L + ++ E R EV++ S L P ++ L GY D LI EY P GT
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 94
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ + L + + D + + A AL + H + VIHRD K N+LL
Sbjct: 95 VYRELQKLSK----FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGEL 147
Query: 297 KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGR 356
K+ DFG S T + GT YL PE K D++S GV+ E L G+
Sbjct: 148 KIADFGW----SVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
Query: 357 VPVDPN 362
P + N
Sbjct: 204 PPFEAN 209
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 78/171 (45%), Gaps = 15/171 (8%)
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
E R EV++ S L P ++ L GY D LI EY P GT+ + L + + D
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDE 110
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
+ + A AL + H + VIHRD K N+LL K+ DFG + ++
Sbjct: 111 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHA 161
Query: 314 QISTR--VLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPN 362
S R + GT YL PE K D++S GV+ E L G+ P + N
Sbjct: 162 PSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 12/192 (6%)
Query: 172 KGVLSDG--TVAAIKKLHRDGKQRER-AFRMEVDLLSRLHSPQLVELLGYCADQNHRLLI 228
KGV+ D T AIK ++ RER F E ++ + +V LLG + L+I
Sbjct: 47 KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 106
Query: 229 SEYMPNGTLQQHLH------RHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRD 282
E M G L+ +L +N P + +A + A + +L+ + +HRD
Sbjct: 107 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRD 163
Query: 283 FKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDV 342
N ++ ++F K+ DFG+ + + + + + L +++PE G TT SDV
Sbjct: 164 LAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV 223
Query: 343 YSYGVVLLELLT 354
+S+GVVL E+ T
Sbjct: 224 WSFGVVLWEIAT 235
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E D++SRL P V+L D Y NG L +++ + + D
Sbjct: 60 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFY 115
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ ALE+LH +IHRD K N+LL+++ ++TDFG AK++S + +
Sbjct: 116 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 172
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
+GT Y++PE + SD+++ G ++ +L+ G P
Sbjct: 173 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E D++SRL P V+L D Y NG L +++ + + D
Sbjct: 59 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFY 114
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ ALE+LH +IHRD K N+LL+++ ++TDFG AK++S + +
Sbjct: 115 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 171
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVL 370
+GT Y++PE + SD+++ G ++ +L+ G + P R E+++
Sbjct: 172 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLI 219
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E D++SRL P V+L D Y NG L +++ + + D
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFY 138
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ ALE+LH +IHRD K N+LL+++ ++TDFG AK++S + +
Sbjct: 139 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 195
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVL 370
+GT Y++PE + SD+++ G ++ +L+ G + P R E+++
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLI 243
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E D++SRL P V+L D Y NG L +++ + + D
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFY 138
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ ALE+LH +IHRD K N+LL+++ ++TDFG AK++S + +
Sbjct: 139 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 195
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
+GT Y++PE + SD+++ G ++ +L+ G P
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 83/186 (44%), Gaps = 14/186 (7%)
Query: 180 VAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT 236
+ A+K L + ++ E R EV++ S L P ++ L GY D LI EY P GT
Sbjct: 34 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 93
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ + L + + D + + A AL + H + VIHRD K N+LL
Sbjct: 94 VYRELQKLSK----FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGEL 146
Query: 297 KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGR 356
K+ DFG S T + GT YL PE K D++S GV+ E L G+
Sbjct: 147 KIADFGW----SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
Query: 357 VPVDPN 362
P + N
Sbjct: 203 PPFEAN 208
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
E R EV++ S L P ++ L GY D LI EY P GT+ + L + + D
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDE 107
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
+ + A AL + H + VIHRD K N+LL K+ DFG S
Sbjct: 108 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPS 160
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPN 362
T + GT YL PE K D++S GV+ E L G+ P + N
Sbjct: 161 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E D++SRL P V+L D Y NG L +++ + + D
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFY 137
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ ALE+LH +IHRD K N+LL+++ ++TDFG AK++S + +
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
+GT Y++PE + SD+++ G ++ +L+ G P
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E D++SRL P V+L D Y NG L +++ + + D
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFY 135
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ ALE+LH +IHRD K N+LL+++ ++TDFG AK++S + +
Sbjct: 136 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVL 370
+GT Y++PE + SD+++ G ++ +L+ G + P R E+++
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLI 240
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E D++SRL P V+L D Y NG L +++ + + D
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFY 137
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ ALE+LH +IHRD K N+LL+++ ++TDFG AK++S + +
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
+GT Y++PE + SD+++ G ++ +L+ G P
Sbjct: 195 VGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 83/186 (44%), Gaps = 14/186 (7%)
Query: 180 VAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT 236
+ A+K L + ++ E R EV++ S L P ++ L GY D LI EY P GT
Sbjct: 39 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 98
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ + L + + D + + A AL + H + VIHRD K N+LL
Sbjct: 99 VYRELQKLSK----FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGEL 151
Query: 297 KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGR 356
K+ DFG S T + GT YL PE K D++S GV+ E L G+
Sbjct: 152 KIADFGW----SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
Query: 357 VPVDPN 362
P + N
Sbjct: 208 PPFEAN 213
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 78/171 (45%), Gaps = 15/171 (8%)
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
E R EV++ S L P ++ L GY D LI EY P GT+ + L + + D
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDE 108
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
+ + A AL + H + VIHRD K N+LL K+ DFG + ++
Sbjct: 109 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHA 159
Query: 314 QISTR--VLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPN 362
S R + GT YL PE K D++S GV+ E L G+ P + N
Sbjct: 160 PSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
E R EV++ S L P ++ L GY D LI EY P GT+ + L + + D
Sbjct: 53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDE 108
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
+ + A AL + H + VIHRD K N+LL K+ DFG S
Sbjct: 109 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPS 161
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPN 362
T + GT YL PE K D++S GV+ E L G+ P + N
Sbjct: 162 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E D++SRL P V+L D Y NG L +++ + + D
Sbjct: 85 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFY 140
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ ALE+LH +IHRD K N+LL+++ ++TDFG AK++S + +
Sbjct: 141 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 197
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVL 370
+GT Y++PE + SD+++ G ++ +L+ G + P R E+++
Sbjct: 198 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLI 245
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
E R EV++ S L P ++ L GY D LI EY P GT+ + L + + D
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDE 107
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
+ + A AL + H + VIHRD K N+LL K+ DFG S
Sbjct: 108 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPS 160
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPN 362
T + GT YL PE K D++S GV+ E L G+ P + N
Sbjct: 161 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E D++SRL P V+L D Y NG L +++ + + D
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFY 137
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ ALE+LH +IHRD K N+LL+++ ++TDFG AK++S + +
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVL 370
+GT Y++PE + SD+++ G ++ +L+ G + P R E+++
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLI 242
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E D++SRL P V+L D Y NG L +++ + + D
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFY 135
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ ALE+LH +IHRD K N+LL+++ ++TDFG AK++S + +
Sbjct: 136 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVL 370
+GT Y++PE + SD+++ G ++ +L+ G + P R E+++
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLI 240
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E D++SRL P V+L D Y NG L +++ + + D
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFY 137
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ ALE+LH +IHRD K N+LL+++ ++TDFG AK++S + +
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
+GT Y++PE + SD+++ G ++ +L+ G P
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E D++SRL P V+L D Y NG L +++ + + D
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFY 135
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ ALE+LH +IHRD K N+LL+++ ++TDFG AK++S + +
Sbjct: 136 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAF 192
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVL 370
+GT Y++PE + SD+++ G ++ +L+ G + P R E+++
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLI 240
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E D++SRL P V+L D Y NG L +++ + + D
Sbjct: 57 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFY 112
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ ALE+LH +IHRD K N+LL+++ ++TDFG AK++S + +
Sbjct: 113 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 169
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVL 370
+GT Y++PE + SD+++ G ++ +L+ G + P R E+++
Sbjct: 170 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLI 217
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 91/182 (50%), Gaps = 21/182 (11%)
Query: 179 TVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQ 238
T A+K + + G AF E +++ L +LV+L + +I+E+M G+L
Sbjct: 207 TKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLL 264
Query: 239 QHLHRHNNRYRPLDWRTRLI-IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAK 297
L +PL +LI + A + F+ + IHRD + +N+L+ + K
Sbjct: 265 DFLKSDEGSKQPL---PKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCK 318
Query: 298 VTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GR 356
+ DFGLA+ + + + + APE + G T KSDV+S+G++L+E++T GR
Sbjct: 319 IADFGLAR-----VGAKFPIK------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 367
Query: 357 VP 358
+P
Sbjct: 368 IP 369
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 12/192 (6%)
Query: 172 KGVLSDG--TVAAIKKLHRDGKQRER-AFRMEVDLLSRLHSPQLVELLGYCADQNHRLLI 228
KGV+ D T AIK ++ RER F E ++ + +V LLG + L+I
Sbjct: 41 KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 100
Query: 229 SEYMPNGTLQQHLH------RHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRD 282
E M G L+ +L +N P + +A + A + +L+ + +HRD
Sbjct: 101 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRD 157
Query: 283 FKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDV 342
N ++ ++F K+ DFG+ + + + + + L +++PE G TT SDV
Sbjct: 158 LAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV 217
Query: 343 YSYGVVLLELLT 354
+S+GVVL E+ T
Sbjct: 218 WSFGVVLWEIAT 229
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 12/192 (6%)
Query: 172 KGVLSDG--TVAAIKKLHRDGKQRER-AFRMEVDLLSRLHSPQLVELLGYCADQNHRLLI 228
KGV+ D T AIK ++ RER F E ++ + +V LLG + L+I
Sbjct: 47 KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 106
Query: 229 SEYMPNGTLQQHLHR------HNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRD 282
E M G L+ +L +N P + +A + A + +L+ + +HRD
Sbjct: 107 MELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRD 163
Query: 283 FKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDV 342
N ++ ++F K+ DFG+ + + + + + L +++PE G TT SDV
Sbjct: 164 LAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV 223
Query: 343 YSYGVVLLELLT 354
+S+GVVL E+ T
Sbjct: 224 WSFGVVLWEIAT 235
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 74/169 (43%), Gaps = 11/169 (6%)
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
E R EV++ S L P ++ L GY D LI EY P G + + L + + D
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDE 112
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
+ + A AL + H + VIHRD K N+LL K+ DFG S
Sbjct: 113 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPS 165
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPN 362
T + GT YL PE K D++S GV+ E L G+ P + N
Sbjct: 166 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E D++SRL P V+L D Y NG L +++ + + D
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFY 137
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ ALE+LH +IHRD K N+LL+++ ++TDFG AK++S + +
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVL 370
+GT Y++PE + SD+++ G ++ +L+ G + P R E+++
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLI 242
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
E R EV++ S L P ++ L GY D LI EY P GT+ + L + + D
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDE 110
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
+ + A AL + H + VIHRD K N+LL K+ DFG S
Sbjct: 111 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPS 163
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPN 362
T + GT YL PE K D++S GV+ E L G+ P + N
Sbjct: 164 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E D++SRL P V+L D Y NG L +++ + + D
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFY 135
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ ALE+LH +IHRD K N+LL+++ ++TDFG AK++S + +
Sbjct: 136 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVL 370
+GT Y++PE + SD+++ G ++ +L+ G + P R E+++
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLI 240
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 78/171 (45%), Gaps = 15/171 (8%)
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
E R EV++ S L P ++ L GY D LI EY P GT+ + L + + D
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDE 107
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
+ + A AL + H + VIHRD K N+LL K+ DFG + ++
Sbjct: 108 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHA 158
Query: 314 QISTR--VLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPN 362
S R + GT YL PE K D++S GV+ E L G+ P + N
Sbjct: 159 PSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E D++SRL P V+L D Y NG L +++ + + D
Sbjct: 58 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFY 113
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ ALE+LH +IHRD K N+LL+++ ++TDFG AK++S + +
Sbjct: 114 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 170
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVL 370
+GT Y++PE + SD+++ G ++ +L+ G + P R E+++
Sbjct: 171 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLI 218
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 12/192 (6%)
Query: 172 KGVLSDG--TVAAIKKLHRDGKQRER-AFRMEVDLLSRLHSPQLVELLGYCADQNHRLLI 228
KGV+ D T AIK ++ RER F E ++ + +V LLG + L+I
Sbjct: 34 KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 93
Query: 229 SEYMPNGTLQQHLH------RHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRD 282
E M G L+ +L +N P + +A + A + +L+ + +HRD
Sbjct: 94 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRD 150
Query: 283 FKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDV 342
N ++ ++F K+ DFG+ + + + + + L +++PE G TT SDV
Sbjct: 151 LAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV 210
Query: 343 YSYGVVLLELLT 354
+S+GVVL E+ T
Sbjct: 211 WSFGVVLWEIAT 222
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 12/192 (6%)
Query: 172 KGVLSDG--TVAAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCADQNHRLLI 228
KGV+ D T AIK ++ RER F E ++ + +V LLG + L+I
Sbjct: 40 KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 99
Query: 229 SEYMPNGTLQQHLH------RHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRD 282
E M G L+ +L +N P + +A + A + +L+ + +HRD
Sbjct: 100 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRD 156
Query: 283 FKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDV 342
N ++ ++F K+ DFG+ + + + + + L +++PE G TT SDV
Sbjct: 157 LAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV 216
Query: 343 YSYGVVLLELLT 354
+S+GVVL E+ T
Sbjct: 217 WSFGVVLWEIAT 228
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 77/171 (45%), Gaps = 15/171 (8%)
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
E R EV++ S L P ++ L GY D LI EY P G + + L + + D
Sbjct: 57 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDE 112
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
+ + A AL + H + VIHRD K N+LL K+ DFG + ++
Sbjct: 113 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHA 163
Query: 314 QISTR--VLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPN 362
S R + GT YL PE K D++S GV+ E L G+ P + N
Sbjct: 164 PSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 78/171 (45%), Gaps = 15/171 (8%)
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
E R EV++ S L P ++ L GY D LI EY P GT+ + L + + D
Sbjct: 52 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDE 107
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
+ + A AL + H + VIHRD K N+LL K+ DFG + ++
Sbjct: 108 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHA 158
Query: 314 QISTR--VLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPN 362
S R + GT YL PE K D++S GV+ E L G+ P + N
Sbjct: 159 PSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 86/188 (45%), Gaps = 18/188 (9%)
Query: 180 VAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT 236
+ A+K L + ++ E R EV++ S L P ++ L GY D LI EY P GT
Sbjct: 38 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 97
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ + L + + D + + A AL + H + VIHRD K N+LL
Sbjct: 98 VYRELQKLSK----FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGEL 150
Query: 297 KVTDFGLAKMVSDKINGQISTR--VLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+ DFG + ++ S R + GT YL PE K D++S GV+ E L
Sbjct: 151 KIADFGWS------VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 204
Query: 355 GRVPVDPN 362
G+ P + N
Sbjct: 205 GKPPFEAN 212
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 12/192 (6%)
Query: 172 KGVLSDG--TVAAIKKLHRDGKQRER-AFRMEVDLLSRLHSPQLVELLGYCADQNHRLLI 228
KGV+ D T AIK ++ RER F E ++ + +V LLG + L+I
Sbjct: 40 KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 99
Query: 229 SEYMPNGTLQQHLH------RHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRD 282
E M G L+ +L +N P + +A + A + +L+ + +HRD
Sbjct: 100 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRD 156
Query: 283 FKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDV 342
N ++ ++F K+ DFG+ + + + + + L +++PE G TT SDV
Sbjct: 157 LAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV 216
Query: 343 YSYGVVLLELLT 354
+S+GVVL E+ T
Sbjct: 217 WSFGVVLWEIAT 228
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+P G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 85/184 (46%), Gaps = 14/184 (7%)
Query: 180 VAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT 236
+ A+K L + ++ E R EV++ S L P ++ L GY D LI EY P GT
Sbjct: 39 ILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 98
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ + L + + R + RT I + A AL + H + VIHRD K N+LL N
Sbjct: 99 VYRELQKLS---RFDEQRTATYIT-ELANALSYCH---SKRVIHRDIKPENLLLGSNGEL 151
Query: 297 KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGR 356
K+ DFG S T + GT YL PE K D++S GV+ E L G
Sbjct: 152 KIADFGW----SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGM 207
Query: 357 VPVD 360
P +
Sbjct: 208 PPFE 211
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY P G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+++DQ KVTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+P G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 83/186 (44%), Gaps = 14/186 (7%)
Query: 180 VAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT 236
+ A+K L + ++ E R EV++ S L P ++ L GY D LI EY P GT
Sbjct: 32 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 91
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ + L + + D + + A AL + H + VIHRD K N+LL
Sbjct: 92 VYRELQKLSK----FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGEL 144
Query: 297 KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGR 356
K+ DFG S T + GT YL PE K D++S GV+ E L G+
Sbjct: 145 KIADFGW----SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
Query: 357 VPVDPN 362
P + N
Sbjct: 201 PPFEAN 206
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+P G + HL R P R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARFYA 148
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 149 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 199
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 78/171 (45%), Gaps = 15/171 (8%)
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
E R EV++ S L P ++ L GY D LI EY P GT+ + L + + D
Sbjct: 55 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDE 110
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
+ + A AL + H + VIHRD K N+LL K+ DFG + ++
Sbjct: 111 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHA 161
Query: 314 QISTR--VLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPN 362
S R + GT YL PE K D++S GV+ E L G+ P + N
Sbjct: 162 PSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+P G + HL R P R
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARFYA 140
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 141 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 191
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 192 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E D++SRL P V+L D Y NG L +++ + + D
Sbjct: 64 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFY 119
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ ALE+LH +IHRD K N+LL+++ ++TDFG AK++S + +
Sbjct: 120 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 176
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVL 370
+GT Y++PE + SD+++ G ++ +L+ G + P R E+++
Sbjct: 177 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLI 224
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+P G + HL R P R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARFYA 148
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK ++ G+ T +
Sbjct: 149 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWT-L 199
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 12/192 (6%)
Query: 172 KGVLSDG--TVAAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCADQNHRLLI 228
KGV+ D T AIK ++ RER F E ++ + +V LLG + L+I
Sbjct: 69 KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 128
Query: 229 SEYMPNGTLQQHLH------RHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRD 282
E M G L+ +L +N P + +A + A + +L+ + +HRD
Sbjct: 129 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRD 185
Query: 283 FKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDV 342
N ++ ++F K+ DFG+ + + + + + L +++PE G TT SDV
Sbjct: 186 LAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV 245
Query: 343 YSYGVVLLELLT 354
+S+GVVL E+ T
Sbjct: 246 WSFGVVLWEIAT 257
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY P G + HL R P R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARFYA 148
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+++DQ KVTDFG AK V + + +
Sbjct: 149 A-QIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXL 199
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E D++SRL P V+L D Y NG L +++ + + D
Sbjct: 79 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFY 134
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ ALE+LH +IHRD K N+LL+++ ++TDFG AK++S + +
Sbjct: 135 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 191
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVL 370
+GT Y++PE + SD+++ G ++ +L+ G + P R E+++
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLI 239
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 88/186 (47%), Gaps = 18/186 (9%)
Query: 180 VAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT 236
+ A+K L + ++ E R EV++ S L P ++ L GY D LI EY P GT
Sbjct: 39 ILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 98
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ + L + + R + RT I + A AL + H + VIHRD K N+LL N
Sbjct: 99 VYRELQKLS---RFDEQRTATYIT-ELANALSYCH---SKRVIHRDIKPENLLLGSNGEL 151
Query: 297 KVTDFGLAKMVSDKINGQISTR--VLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+ DFG + ++ S R + GT YL PE K D++S GV+ E L
Sbjct: 152 KIADFGWS------VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 205
Query: 355 GRVPVD 360
G P +
Sbjct: 206 GMPPFE 211
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 91/192 (47%), Gaps = 12/192 (6%)
Query: 172 KGVLSDG--TVAAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCADQNHRLLI 228
KGV+ D T AIK ++ RER F E ++ + +V LLG + L+I
Sbjct: 37 KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 96
Query: 229 SEYMPNGTLQQHLHR------HNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRD 282
E M G L+ +L +N P + +A + A + +L+ + +HRD
Sbjct: 97 MELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRD 153
Query: 283 FKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDV 342
N ++ ++F K+ DFG+ + + + + + L +++PE G TT SDV
Sbjct: 154 LAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV 213
Query: 343 YSYGVVLLELLT 354
+S+GVVL E+ T
Sbjct: 214 WSFGVVLWEIAT 225
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+P G + HL R P R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARFYA 148
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 149 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 199
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E D++SRL P V+L D Y NG L +++ + + D
Sbjct: 79 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFY 134
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ ALE+LH +IHRD K N+LL+++ ++TDFG AK++S + +
Sbjct: 135 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 191
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVL 370
+GT Y++PE + SD+++ G ++ +L+ G + P R E+++
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG---LPPFRAGNEYLI 239
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+P G + HL R P R
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARFYA 168
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 169 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 219
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+P G + HL R P R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARFYA 148
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 149 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 199
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+P G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+P G + HL R P R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARFYA 148
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 149 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 199
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 32/206 (15%)
Query: 171 YKGV-LSDGTVA----AIKKLHRD-GKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNH 224
YKG+ + +G AIK L+ G + F E +++ + P LV LLG C
Sbjct: 55 YKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTI 114
Query: 225 RLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTRLIIALDCAMALEFLHEHATPPVIHR 281
+L +++ MP+G L +++H H + L+W + A + +L E ++HR
Sbjct: 115 QL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLEERR---LVHR 164
Query: 282 DFKCSNVLLDQNFRAKVTDFGLAKMVS------DKINGQISTRVLGTTGYLAPEYASTGK 335
D NVL+ K+TDFGLA+++ + G++ + ++A E K
Sbjct: 165 DLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK------WMALECIHYRK 218
Query: 336 LTTKSDVYSYGVVLLELLT-GRVPVD 360
T +SDV+SYGV + EL+T G P D
Sbjct: 219 FTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY P G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+++DQ KVTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+P G + HL R P R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARFYA 148
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 149 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 199
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+P G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+P G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+P G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+P G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+P G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+P G + HL R P R
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARFYA 140
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 141 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 191
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 192 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY P G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+++DQ +VTDFGLAK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+P G + HL R P R
Sbjct: 77 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARFYA 133
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK ++ G+ T +
Sbjct: 134 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWT-L 184
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 185 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 229
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+P G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ KV DFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 171 YKGV-LSDGTVA----AIKKLHRD-GKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNH 224
YKG+ + +G AIK L+ G + F E +++ + P LV LLG C
Sbjct: 32 YKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTI 91
Query: 225 RLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTRLIIALDCAMALEFLHEHATPPVIHR 281
+L +++ MP+G L +++H H + L+W ++ A + +L E ++HR
Sbjct: 92 QL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYLEERR---LVHR 141
Query: 282 DFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSD 341
D NVL+ K+TDFGLA+++ + ++A E K T +SD
Sbjct: 142 DLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSD 201
Query: 342 VYSYGVVLLELLT-GRVPVD 360
V+SYGV + EL+T G P D
Sbjct: 202 VWSYGVTIWELMTFGGKPYD 221
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
E R EV++ S L P ++ L GY D LI EY P GT+ + L + + D
Sbjct: 54 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDE 109
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKING 313
+ + A AL + H + VIHRD K N+LL K+ +FG S
Sbjct: 110 QRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGW----SVHAPS 162
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPN 362
T + GT YL PE K D++S GV+ E L G+ P + N
Sbjct: 163 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 29/231 (12%)
Query: 198 RMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRL 257
+ E+ +LS+ SP + + G +I EY+ G+ L PLD
Sbjct: 68 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIA 122
Query: 258 IIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIS- 316
I + L++LH IHRD K +NVLL ++ K+ DFG+A ++D QI
Sbjct: 123 TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT---QIKR 176
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALP 376
+GT ++APE +K+D++S G+ +EL G P P + V + +P
Sbjct: 177 NXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP----MKVLFLIP 232
Query: 377 RLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQ 427
+ P+L+G Y K C+ E ++RP ++++
Sbjct: 233 KNNP---------PTLEGNYSK----PLKEFVEACLNKEPSFRPTAKELLK 270
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 83/161 (51%), Gaps = 9/161 (5%)
Query: 198 RMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRL 257
+ME D+L ++ P +V+L + LI +++ G L R + + +
Sbjct: 74 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKF 130
Query: 258 IIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIST 317
+A + A+AL+ LH +I+RD K N+LLD+ K+TDFGL+K D S
Sbjct: 131 YLA-ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS- 185
Query: 318 RVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
GT Y+APE + T +D +S+GV++ E+LTG +P
Sbjct: 186 -FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 85/209 (40%), Gaps = 30/209 (14%)
Query: 181 AAIKKLHRDGKQRER-AFRMEVDLLSRLHS-PQLVELLGYCADQNHRLLISEYMPNGTLQ 238
A+K L ER A E+ ++++L S +V LLG C LI EY G L
Sbjct: 78 VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLL 137
Query: 239 QHLHRHNNRYRP-------------------LDWRTRLIIALDCAMALEFLHEHATPPVI 279
+L ++ L + L A A +EFL +
Sbjct: 138 NYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCV 194
Query: 280 HRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTK 339
HRD NVL+ K+ DFGLA+ + N + ++APE G T K
Sbjct: 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIK 254
Query: 340 SDVYSYGVVLLELLTGRV------PVDPN 362
SDV+SYG++L E+ + V PVD N
Sbjct: 255 SDVWSYGILLWEIFSLGVNPYPGIPVDAN 283
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 29/231 (12%)
Query: 198 RMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRL 257
+ E+ +LS+ SP + + G +I EY+ G+ L PLD
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIA 107
Query: 258 IIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIS- 316
I + L++LH IHRD K +NVLL ++ K+ DFG+A ++D QI
Sbjct: 108 TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT---QIKR 161
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALP 376
+GT ++APE +K+D++S G+ +EL G P P + V + +P
Sbjct: 162 NXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP----MKVLFLIP 217
Query: 377 RLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQ 427
+ P+L+G Y K C+ E ++RP ++++
Sbjct: 218 KNNP---------PTLEGNYSK----PLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 12/192 (6%)
Query: 172 KGVLSDG--TVAAIKKLHRDGKQRER-AFRMEVDLLSRLHSPQLVELLGYCADQNHRLLI 228
KGV+ D T AIK ++ RER F E ++ + +V LLG + L+I
Sbjct: 34 KGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI 93
Query: 229 SEYMPNGTLQQHLH------RHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRD 282
E M G L+ +L +N P + +A + A + +L+ + +HRD
Sbjct: 94 MELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRD 150
Query: 283 FKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDV 342
N + ++F K+ DFG+ + + + + + L +++PE G TT SDV
Sbjct: 151 LAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV 210
Query: 343 YSYGVVLLELLT 354
+S+GVVL E+ T
Sbjct: 211 WSFGVVLWEIAT 222
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 16/223 (7%)
Query: 143 VFTYKELETATENFSEXXXXXXXXXXXXYKGVLSD------GTVAAIKKLHRDGKQRER- 195
VF E E + E + Y+G D T A+K ++ RER
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 196 AFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHR-----HNNRYRP 250
F E ++ +V LLG + L++ E M +G L+ +L NN RP
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 251 LDWRTRLI-IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSD 309
+I +A + A + +L+ +HRD N ++ +F K+ DFG+ + + +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 310 KINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
+ + L ++APE G TT SD++S+GVVL E+
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 27/256 (10%)
Query: 210 PQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEF 269
P LV L ++ + EY+ G L H+ R R L + + ++AL +
Sbjct: 81 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNY 136
Query: 270 LHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE 329
LHE +I+RD K NVLLD K+TD+G+ K G ++ GT Y+APE
Sbjct: 137 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPE 191
Query: 330 YASTGKLTTKSDVYSYGVVLLELLTGRVPVD-------PNRPPGEHVL-----VSWALPR 377
D ++ GV++ E++ GR P D P++ +++ +PR
Sbjct: 192 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 251
Query: 378 LTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQ--SLIPVVKN 435
S + A V S + PK+ L +Q +R + D+++ ++P K
Sbjct: 252 SMSVKAAS--VLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKP 309
Query: 436 NAAGAISFGSSRFQHQ 451
N +G FG F Q
Sbjct: 310 NISG--EFGLDNFDSQ 323
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 83/186 (44%), Gaps = 14/186 (7%)
Query: 180 VAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT 236
+ A+K L + ++ E R EV++ S L P ++ L GY D LI EY P GT
Sbjct: 38 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 97
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ + L + + D + + A AL + H + VIHRD K N+LL
Sbjct: 98 VYRELQKLSK----FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGEL 150
Query: 297 KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGR 356
K+ +FG S T + GT YL PE K D++S GV+ E L G+
Sbjct: 151 KIANFGW----SVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
Query: 357 VPVDPN 362
P + N
Sbjct: 207 PPFEAN 212
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 16/223 (7%)
Query: 143 VFTYKELETATENFSEXXXXXXXXXXXXYKGVLSD------GTVAAIKKLHRDGKQRER- 195
VF E E + E + Y+G D T A+K ++ RER
Sbjct: 3 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 62
Query: 196 AFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHR-----HNNRYRP 250
F E ++ +V LLG + L++ E M +G L+ +L NN RP
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 251 LDWRTRLI-IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSD 309
+I +A + A + +L+ +HRD N ++ +F K+ DFG+ + + +
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 179
Query: 310 KINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
+ + L ++APE G TT SD++S+GVVL E+
Sbjct: 180 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 29/231 (12%)
Query: 198 RMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRL 257
+ E+ +LS+ SP + + G +I EY+ G+ L PLD
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIA 107
Query: 258 IIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIS- 316
I + L++LH IHRD K +NVLL ++ K+ DFG+A ++D QI
Sbjct: 108 TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT---QIKR 161
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALP 376
+GT ++APE +K+D++S G+ +EL G P P + V + +P
Sbjct: 162 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP----MKVLFLIP 217
Query: 377 RLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQ 427
+ P+L+G Y K C+ E ++RP ++++
Sbjct: 218 KNNP---------PTLEGNYSK----PLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 9/161 (5%)
Query: 198 RMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRL 257
+ME D+L ++ P +V+L + LI +++ G L R + + +
Sbjct: 74 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKF 130
Query: 258 IIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIST 317
+A + A+AL+ LH + +I+RD K N+LLD+ K+TDFGL+K D + + +
Sbjct: 131 YLA-ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID--HEKKAY 184
Query: 318 RVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
GT Y+APE + T +D +S+GV++ E+LTG +P
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 86/161 (53%), Gaps = 9/161 (5%)
Query: 198 RMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRL 257
+ME D+L ++ P +V+L + LI +++ G L R + + +
Sbjct: 75 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL---FTRLSKEVMFTEEDVKF 131
Query: 258 IIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIST 317
+A + A+AL+ LH + +I+RD K N+LLD+ K+TDFGL+K D + + +
Sbjct: 132 YLA-ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID--HEKKAY 185
Query: 318 RVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
GT Y+APE + T +D +S+GV++ E+LTG +P
Sbjct: 186 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 29/231 (12%)
Query: 198 RMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRL 257
+ E+ +LS+ SP + + G +I EY+ G+ L PLD
Sbjct: 73 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIA 127
Query: 258 IIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIS- 316
I + L++LH IHRD K +NVLL ++ K+ DFG+A ++D QI
Sbjct: 128 TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT---QIKR 181
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALP 376
+GT ++APE +K+D++S G+ +EL G P P + V + +P
Sbjct: 182 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP----MKVLFLIP 237
Query: 377 RLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQ 427
+ P+L+G Y K C+ E ++RP ++++
Sbjct: 238 KNNP---------PTLEGNYSKP----LKEFVEACLNKEPSFRPTAKELLK 275
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY P G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+++DQ +VTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P L +L D ++ ++ EY P G + HL R P R
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP---HARFYA 148
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+++DQ KVTDFG AK V + + +
Sbjct: 149 A-QIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXL 199
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 27/256 (10%)
Query: 210 PQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEF 269
P LV L ++ + EY+ G L H+ R R L + + ++AL +
Sbjct: 113 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNY 168
Query: 270 LHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE 329
LHE +I+RD K NVLLD K+TD+G+ K G ++ GT Y+APE
Sbjct: 169 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAPE 223
Query: 330 YASTGKLTTKSDVYSYGVVLLELLTGRVPVD-------PNRPPGEHVL-----VSWALPR 377
D ++ GV++ E++ GR P D P++ +++ +PR
Sbjct: 224 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 283
Query: 378 LTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQ--SLIPVVKN 435
S + A V S + PK+ L +Q +R + D+++ ++P K
Sbjct: 284 SLSVKAAS--VLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKP 341
Query: 436 NAAGAISFGSSRFQHQ 451
N +G FG F Q
Sbjct: 342 NISG--EFGLDNFDSQ 355
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E+ L L P +++L +++ EY G L ++ D R
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTE--DEGRRFFQ 115
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ CA +E+ H H ++HRD K N+LLD N K+ DFGL+ +++D G
Sbjct: 116 QIICA--IEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTD---GNFLKTS 167
Query: 320 LGTTGYLAPEYASTGKLTT--KSDVYSYGVVLLELLTGRVPVDPNRPP 365
G+ Y APE + GKL + DV+S G+VL +L GR+P D P
Sbjct: 168 CGSPNYAAPEVIN-GKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP 214
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 10/181 (5%)
Query: 179 TVAAIKKLHRDGKQRER-AFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTL 237
T A+K ++ RER F E ++ +V LLG + L++ E M +G L
Sbjct: 48 TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 107
Query: 238 QQHLHR-----HNNRYRPLDWRTRLI-IALDCAMALEFLHEHATPPVIHRDFKCSNVLLD 291
+ +L NN RP +I +A + A + +L+ +HRD N ++
Sbjct: 108 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVA 164
Query: 292 QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLE 351
+F K+ DFG+ + + + + + L ++APE G TT SD++S+GVVL E
Sbjct: 165 HDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE 224
Query: 352 L 352
+
Sbjct: 225 I 225
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 27/256 (10%)
Query: 210 PQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEF 269
P LV L ++ + EY+ G L H+ R R L + + ++AL +
Sbjct: 66 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNY 121
Query: 270 LHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE 329
LHE +I+RD K NVLLD K+TD+G+ K G ++ GT Y+APE
Sbjct: 122 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPE 176
Query: 330 YASTGKLTTKSDVYSYGVVLLELLTGRVPVD-------PNRPPGEHVL-----VSWALPR 377
D ++ GV++ E++ GR P D P++ +++ +PR
Sbjct: 177 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 236
Query: 378 LTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQ--SLIPVVKN 435
S + A V S + PK+ L +Q +R + D+++ ++P K
Sbjct: 237 SLSVKAAS--VLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKP 294
Query: 436 NAAGAISFGSSRFQHQ 451
N +G FG F Q
Sbjct: 295 NISG--EFGLDNFDSQ 308
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 27/256 (10%)
Query: 210 PQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEF 269
P LV L ++ + EY+ G L H+ R R L + + ++AL +
Sbjct: 70 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNY 125
Query: 270 LHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE 329
LHE +I+RD K NVLLD K+TD+G+ K G ++ GT Y+APE
Sbjct: 126 LHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPE 180
Query: 330 YASTGKLTTKSDVYSYGVVLLELLTGRVPVD-------PNRPPGEHVL-----VSWALPR 377
D ++ GV++ E++ GR P D P++ +++ +PR
Sbjct: 181 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 240
Query: 378 LTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQ--SLIPVVKN 435
S + A V S + PK+ L +Q +R + D+++ ++P K
Sbjct: 241 SLSVKAAS--VLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKP 298
Query: 436 NAAGAISFGSSRFQHQ 451
N +G FG F Q
Sbjct: 299 NISG--EFGLDNFDSQ 312
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 17/186 (9%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E+ L L P +++L ++ +++ EY N + R + + II
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQII 122
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ A+E+ H H ++HRD K N+LLD++ K+ DFGL+ +++D G
Sbjct: 123 S-----AVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTD---GNFLKTS 171
Query: 320 LGTTGYLAPEYASTGKLTT--KSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVS---WA 374
G+ Y APE S GKL + DV+S GV+L +L R+P D P +S +
Sbjct: 172 CGSPNYAAPEVIS-GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYT 230
Query: 375 LPRLTS 380
LP+ S
Sbjct: 231 LPKFLS 236
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P L +L D ++ ++ EY P G + HL R P R
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARFYA 148
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+++DQ KVTDFG AK V + + +
Sbjct: 149 A-QIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXL 199
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P L +L D ++ ++ EY P G + HL R P R
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARFYA 148
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+++DQ KVTDFG AK V + + +
Sbjct: 149 A-QIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXL 199
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 94/183 (51%), Gaps = 11/183 (6%)
Query: 178 GTVAAIKKLHRDG-KQRERA-FRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNG 235
G + A+K L + K R+R +ME D+L+ ++ P +V+L + LI +++ G
Sbjct: 56 GHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGG 115
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
L R + + + +A + A+ L+ LH +I+RD K N+LLD+
Sbjct: 116 DL---FTRLSKEVMFTEEDVKFYLA-ELALGLDHLHSLG---IIYRDLKPENILLDEEGH 168
Query: 296 AKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTG 355
K+TDFGL+K D S GT Y+APE + + +D +SYGV++ E+LTG
Sbjct: 169 IKLTDFGLSKEAIDHEKKAYS--FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
Query: 356 RVP 358
+P
Sbjct: 227 SLP 229
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 17/186 (9%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E+ L L P +++L ++ +++ EY N + R + + II
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQII 123
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ A+E+ H H ++HRD K N+LLD++ K+ DFGL+ +++D G
Sbjct: 124 S-----AVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTD---GNFLKTS 172
Query: 320 LGTTGYLAPEYASTGKLTT--KSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVS---WA 374
G+ Y APE S GKL + DV+S GV+L +L R+P D P +S +
Sbjct: 173 CGSPNYAAPEVIS-GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYT 231
Query: 375 LPRLTS 380
LP+ S
Sbjct: 232 LPKFLS 237
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 93/193 (48%), Gaps = 22/193 (11%)
Query: 181 AAIKKLHRDGK-QRERAFRMEVDLLSRLHSPQLVELLGYCADQN---HRLLISEYMPNGT 236
AIK L R + Q+ AF E L+ L+ P ++ L+G H LL YM +G
Sbjct: 52 CAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL--PYMCHGD 109
Query: 237 LQQHLH--RHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L Q + + N + L + L A +E+L E +HRD N +LD++F
Sbjct: 110 LLQFIRSPQRNPTVKDL-----ISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESF 161
Query: 295 RAKVTDFGLAKMVSDK--INGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
KV DFGLA+ + D+ + Q + A E T + TTKSDV+S+GV+L EL
Sbjct: 162 TVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWEL 221
Query: 353 LTGRVP----VDP 361
LT P +DP
Sbjct: 222 LTRGAPPYRHIDP 234
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 17/186 (9%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E+ L L P +++L ++ +++ EY N + R + + II
Sbjct: 54 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQII 113
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ A+E+ H H ++HRD K N+LLD++ K+ DFGL+ +++D G
Sbjct: 114 S-----AVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTD---GNFLKTS 162
Query: 320 LGTTGYLAPEYASTGKLTT--KSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVS---WA 374
G+ Y APE S GKL + DV+S GV+L +L R+P D P +S +
Sbjct: 163 CGSPNYAAPEVIS-GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYT 221
Query: 375 LPRLTS 380
LP+ S
Sbjct: 222 LPKFLS 227
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 16/223 (7%)
Query: 143 VFTYKELETATENFSEXXXXXXXXXXXXYKGVLSD------GTVAAIKKLHRDGKQRER- 195
VF E E + E + Y+G D T A+K ++ RER
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 196 AFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHR-----HNNRYRP 250
F E ++ +V LLG + L++ E M +G L+ +L NN RP
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 251 LDWRTRLI-IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSD 309
+I +A + A + +L+ +HRD N ++ +F K+ DFG+ + + +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 310 KINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
+ + L ++APE G TT SD++S+GVVL E+
Sbjct: 183 TAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 83/194 (42%), Gaps = 24/194 (12%)
Query: 182 AIKKLHRDGKQRER-AFRMEVDLLSRL-HSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
A+K L E+ A E+ ++S L +V LLG C L+I+EY G L
Sbjct: 65 AVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLN 124
Query: 240 HLHRHNNRY-------------------RPLDWRTRLIIALDCAMALEFLHEHATPPVIH 280
L R RPL+ R L + A + FL A+ IH
Sbjct: 125 FLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIH 181
Query: 281 RDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKS 340
RD NVLL AK+ DFGLA+ + + N + ++APE T +S
Sbjct: 182 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS 241
Query: 341 DVYSYGVVLLELLT 354
DV+SYG++L E+ +
Sbjct: 242 DVWSYGILLWEIFS 255
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 17/186 (9%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E+ L L P +++L ++ +++ EY N + R + + II
Sbjct: 58 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQII 117
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ A+E+ H H ++HRD K N+LLD++ K+ DFGL+ +++D G
Sbjct: 118 S-----AVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTD---GNFLKTS 166
Query: 320 LGTTGYLAPEYASTGKLTT--KSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVS---WA 374
G+ Y APE S GKL + DV+S GV+L +L R+P D P +S +
Sbjct: 167 CGSPNYAAPEVIS-GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYT 225
Query: 375 LPRLTS 380
LP+ S
Sbjct: 226 LPKFLS 231
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 19/196 (9%)
Query: 178 GTVAAIKKLHRDGKQ--RERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNG 235
G V A K +H + K R + R E+ +L +SP +V G + E+M G
Sbjct: 31 GLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 89
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L Q L + P ++ IA+ L +L E ++HRD K SN+L++
Sbjct: 90 SLDQVLKKAGRI--PEQILGKVSIAV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGE 143
Query: 296 AKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTG 355
K+ DFG VS ++ ++ +GT Y++PE + +SD++S G+ L+E+ G
Sbjct: 144 IKLCDFG----VSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
Query: 356 RVPVDP------NRPP 365
R P+ P +RPP
Sbjct: 200 RYPIPPPDAKEDSRPP 215
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 90/184 (48%), Gaps = 10/184 (5%)
Query: 175 LSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
++ G AI++++ + ++ E+ ++ +P +V L + ++ EY+
Sbjct: 42 VATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 101
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
G+L + +D + +C ALEFLH + VIHRD K N+LL +
Sbjct: 102 GSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDG 153
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+TDFG ++ + + + + ++GT ++APE + K D++S G++ +E++
Sbjct: 154 SVKLTDFGFCAQITPEQSKR--SEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 211
Query: 355 GRVP 358
G P
Sbjct: 212 GEPP 215
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E+ ++ L P LV L D+ ++ + + G L+ HL + N ++ T +
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQ-NVHFKE---ETVKLF 120
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ MAL++L +IHRD K N+LLD++ +TDF +A M+ + QI+T +
Sbjct: 121 ICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET--QITT-M 174
Query: 320 LGTTGYLAPEYASTGKLTTKS---DVYSYGVVLLELLTGRVP 358
GT Y+APE S+ K S D +S GV ELL GR P
Sbjct: 175 AGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+ G + HL R P R
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARFYA 168
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 169 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 219
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 19/224 (8%)
Query: 174 VLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMP 233
V S G + A+KK+ +QR EV ++ +VE+ + ++ E++
Sbjct: 45 VRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 104
Query: 234 NGTLQQHL-HRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQ 292
G L + H N + IA C L+ L VIHRD K ++LL
Sbjct: 105 GGALTDIVTHTRMNEEQ---------IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH 155
Query: 293 NFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
+ R K++DFG VS ++ + ++GT ++APE S + D++S G++++E+
Sbjct: 156 DGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 213
Query: 353 LTGRVPVDPNRPPGEHVLVSWALPR--LTSREEAVEMVDPSLQG 394
+ G P N PP L + + R L R + + V PSL+G
Sbjct: 214 VDGEPPYF-NEPP----LKAMKMIRDNLPPRLKNLHKVSPSLKG 252
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 19/224 (8%)
Query: 174 VLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMP 233
V S G + A+KK+ +QR EV ++ +VE+ + ++ E++
Sbjct: 172 VRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 231
Query: 234 NGTLQQHL-HRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQ 292
G L + H N + IA C L+ L VIHRD K ++LL
Sbjct: 232 GGALTDIVTHTRMNEEQ---------IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH 282
Query: 293 NFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
+ R K++DFG VS ++ + ++GT ++APE S + D++S G++++E+
Sbjct: 283 DGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 340
Query: 353 LTGRVPVDPNRPPGEHVLVSWALPR--LTSREEAVEMVDPSLQG 394
+ G P N PP L + + R L R + + V PSL+G
Sbjct: 341 VDGEPPYF-NEPP----LKAMKMIRDNLPPRLKNLHKVSPSLKG 379
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 19/224 (8%)
Query: 174 VLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMP 233
V S G + A+KK+ +QR EV ++ +VE+ + ++ E++
Sbjct: 50 VRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 109
Query: 234 NGTLQQHL-HRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQ 292
G L + H N + IA C L+ L VIHRD K ++LL
Sbjct: 110 GGALTDIVTHTRMNEEQ---------IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH 160
Query: 293 NFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
+ R K++DFG VS ++ + ++GT ++APE S + D++S G++++E+
Sbjct: 161 DGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 218
Query: 353 LTGRVPVDPNRPPGEHVLVSWALPR--LTSREEAVEMVDPSLQG 394
+ G P N PP L + + R L R + + V PSL+G
Sbjct: 219 VDGEPPYF-NEPP----LKAMKMIRDNLPPRLKNLHKVSPSLKG 257
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+ G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+ G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 19/224 (8%)
Query: 174 VLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMP 233
V S G + A+KK+ +QR EV ++ +VE+ + ++ E++
Sbjct: 95 VRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 154
Query: 234 NGTLQQHL-HRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQ 292
G L + H N + IA C L+ L VIHRD K ++LL
Sbjct: 155 GGALTDIVTHTRMNEEQ---------IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH 205
Query: 293 NFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
+ R K++DFG VS ++ + ++GT ++APE S + D++S G++++E+
Sbjct: 206 DGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 263
Query: 353 LTGRVPVDPNRPPGEHVLVSWALPR--LTSREEAVEMVDPSLQG 394
+ G P N PP L + + R L R + + V PSL+G
Sbjct: 264 VDGEPPYF-NEPP----LKAMKMIRDNLPPRLKNLHKVSPSLKG 302
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 19/224 (8%)
Query: 174 VLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMP 233
V S G + A+KK+ +QR EV ++ +VE+ + ++ E++
Sbjct: 41 VRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 100
Query: 234 NGTLQQHL-HRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQ 292
G L + H N + IA C L+ L VIHRD K ++LL
Sbjct: 101 GGALTDIVTHTRMNEEQ---------IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH 151
Query: 293 NFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
+ R K++DFG VS ++ + ++GT ++APE S + D++S G++++E+
Sbjct: 152 DGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 209
Query: 353 LTGRVPVDPNRPPGEHVLVSWALPR--LTSREEAVEMVDPSLQG 394
+ G P N PP L + + R L R + + V PSL+G
Sbjct: 210 VDGEPPYF-NEPP----LKAMKMIRDNLPPRLKNLHKVSPSLKG 248
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 13/186 (6%)
Query: 178 GTVAAIKKLHRDGKQ--RERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNG 235
G + A K +H + K R + R E+ +L +SP +V G + E+M G
Sbjct: 41 GLIMARKLIHLEIKPAIRNQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 99
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L Q L + P + ++ IA+ L +L E ++HRD K SN+L++
Sbjct: 100 SLDQVLK--EAKRIPEEILGKVSIAV--LRGLAYLREKHQ--IMHRDVKPSNILVNSRGE 153
Query: 296 AKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTG 355
K+ DFG VS ++ ++ +GT Y+APE + +SD++S G+ L+EL G
Sbjct: 154 IKLCDFG----VSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVG 209
Query: 356 RVPVDP 361
R P+ P
Sbjct: 210 RYPIPP 215
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 7/180 (3%)
Query: 176 SDGTVAAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
+D T+ A+K +A F E +L + P +V L+G C + ++ E +
Sbjct: 137 ADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQG 196
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
G L R R +T L + D A +E+L IHRD N L+ +
Sbjct: 197 GDFLTFLRTEGARLRV---KTLLQMVGDAAAGMEYLESKCC---IHRDLAARNCLVTEKN 250
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K++DFG+++ +D + + APE + G+ +++SDV+S+G++L E +
Sbjct: 251 VLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 19/224 (8%)
Query: 174 VLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMP 233
V S G + A+KK+ +QR EV ++ +VE+ + ++ E++
Sbjct: 52 VRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 111
Query: 234 NGTLQQHL-HRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQ 292
G L + H N + IA C L+ L VIHRD K ++LL
Sbjct: 112 GGALTDIVTHTRMNEEQ---------IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH 162
Query: 293 NFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
+ R K++DFG VS ++ + ++GT ++APE S + D++S G++++E+
Sbjct: 163 DGRVKLSDFGFCAQVSKEVPRR--KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 220
Query: 353 LTGRVPVDPNRPPGEHVLVSWALPR--LTSREEAVEMVDPSLQG 394
+ G P N PP L + + R L R + + V PSL+G
Sbjct: 221 VDGEPPYF-NEPP----LKAMKMIRDNLPPRLKNLHKVSPSLKG 259
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+ G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 XGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 90/184 (48%), Gaps = 10/184 (5%)
Query: 175 LSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
++ G AI++++ + ++ E+ ++ +P +V L + ++ EY+
Sbjct: 43 VATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 102
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
G+L + +D + +C ALEFLH + VIHRD K N+LL +
Sbjct: 103 GSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDG 154
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+TDFG ++ + + + + ++GT ++APE + K D++S G++ +E++
Sbjct: 155 SVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 212
Query: 355 GRVP 358
G P
Sbjct: 213 GEPP 216
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 16/223 (7%)
Query: 143 VFTYKELETATENFSEXXXXXXXXXXXXYKGVLSD------GTVAAIKKLHRDGKQRER- 195
VF E E + E + Y+G D T A+K ++ RER
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 196 AFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHR-----HNNRYRP 250
F E ++ +V LLG + L++ E M +G L+ +L NN RP
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 251 LDWRTRLI-IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSD 309
+I +A + A + +L+ +HRD N ++ +F K+ DFG+ + + +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 310 KINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
+ + L ++APE G TT SD++S+GVVL E+
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 90/184 (48%), Gaps = 10/184 (5%)
Query: 175 LSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
++ G AI++++ + ++ E+ ++ +P +V L + ++ EY+
Sbjct: 42 VATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 101
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
G+L + +D + +C ALEFLH + VIHRD K N+LL +
Sbjct: 102 GSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDG 153
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+TDFG ++ + + + + ++GT ++APE + K D++S G++ +E++
Sbjct: 154 SVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 211
Query: 355 GRVP 358
G P
Sbjct: 212 GEPP 215
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+ G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 13/189 (6%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTL 237
G A+KK+ +QR EV ++ H +V++ + ++ E++ G L
Sbjct: 70 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGAL 129
Query: 238 QQHL-HRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
+ H N + L AL +LH VIHRD K ++LL + R
Sbjct: 130 TDIVTHTRMNE------EQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRI 180
Query: 297 KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGR 356
K++DFG VS ++ + ++GT ++APE S T+ D++S G++++E++ G
Sbjct: 181 KLSDFGFCAQVSKEVPKR--KXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 238
Query: 357 VPVDPNRPP 365
P N PP
Sbjct: 239 PPYF-NEPP 246
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 10/184 (5%)
Query: 175 LSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
++ G AI++++ + ++ E+ ++ +P +V L + ++ EY+
Sbjct: 42 VATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 101
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
G+L + +D + +C ALEFLH + VIHRD K N+LL +
Sbjct: 102 GSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDG 153
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+TDFG ++ + + ST V GT ++APE + K D++S G++ +E++
Sbjct: 154 SVKLTDFGFCAQITPE-QSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 211
Query: 355 GRVP 358
G P
Sbjct: 212 GEPP 215
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+ G + HL R P R
Sbjct: 86 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARFYA 142
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 143 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 193
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 194 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+ G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+ G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 10/190 (5%)
Query: 173 GVLSDGTVAAIKKLH----RDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLI 228
L DG A+KK+ D K R + E+DLL +L+ P +++ + N ++
Sbjct: 52 ACLLDGVPVALKKVQIFDLMDAKARADCIK-EIDLLKQLNHPNVIKYYASFIEDNELNIV 110
Query: 229 SEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNV 288
E G L + + + R + RT + ALE +H V+HRD K +NV
Sbjct: 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANV 167
Query: 289 LLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
+ K+ D GL + S K S ++GT Y++PE KSD++S G +
Sbjct: 168 FITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYYMSPERIHENGYNFKSDIWSLGCL 225
Query: 349 LLELLTGRVP 358
L E+ + P
Sbjct: 226 LYEMAALQSP 235
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+ G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+ G + HL R P R
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARFYA 148
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 149 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 199
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 200 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+ G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+ G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 AGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+ G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+ G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 80/185 (43%), Gaps = 16/185 (8%)
Query: 180 VAAIKKLHRDGKQRE---RAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT 236
+ A+K L + ++E R E+++ S L P ++ + Y D+ L+ E+ P G
Sbjct: 42 IMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGE 101
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
L + L +H D + + A AL + HE VIHRD K N+L+
Sbjct: 102 LYKELQKHGR----FDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGEL 154
Query: 297 KVTDFGLAKMVSDKINGQISTRVL-GTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTG 355
K+ DFG + + R + GT YL PE K D++ GV+ E L G
Sbjct: 155 KIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
Query: 356 RVPVD 360
P D
Sbjct: 210 MPPFD 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 80/185 (43%), Gaps = 16/185 (8%)
Query: 180 VAAIKKLHRDGKQRE---RAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT 236
+ A+K L + ++E R E+++ S L P ++ + Y D+ L+ E+ P G
Sbjct: 41 IMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGE 100
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
L + L +H D + + A AL + HE VIHRD K N+L+
Sbjct: 101 LYKELQKHGR----FDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGEL 153
Query: 297 KVTDFGLAKMVSDKINGQISTRVL-GTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTG 355
K+ DFG + + R + GT YL PE K D++ GV+ E L G
Sbjct: 154 KIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
Query: 356 RVPVD 360
P D
Sbjct: 209 MPPFD 213
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 7/180 (3%)
Query: 176 SDGTVAAIKKLHRDGKQRERA-FRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
+D T+ A+K +A F E +L + P +V L+G C + ++ E +
Sbjct: 137 ADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQG 196
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
G L R R +T L + D A +E+L IHRD N L+ +
Sbjct: 197 GDFLTFLRTEGARLRV---KTLLQMVGDAAAGMEYLESKCC---IHRDLAARNCLVTEKN 250
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K++DFG+++ +D + + APE + G+ +++SDV+S+G++L E +
Sbjct: 251 VLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 80/185 (43%), Gaps = 16/185 (8%)
Query: 180 VAAIKKLHRDGKQRE---RAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT 236
+ A+K L + ++E R E+++ S L P ++ + Y D+ L+ E+ P G
Sbjct: 41 IMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGE 100
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
L + L +H D + + A AL + HE VIHRD K N+L+
Sbjct: 101 LYKELQKHGR----FDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGEL 153
Query: 297 KVTDFGLAKMVSDKINGQISTRVL-GTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTG 355
K+ DFG + + R + GT YL PE K D++ GV+ E L G
Sbjct: 154 KIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
Query: 356 RVPVD 360
P D
Sbjct: 209 MPPFD 213
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 89/200 (44%), Gaps = 26/200 (13%)
Query: 171 YKGVLSDGTVAAI------KKLHRDGKQRERAFRMEVDLLSRLHSPQLVELL----GYCA 220
YKG+ ++ TV +KL + +QR F+ E + L L P +V
Sbjct: 43 YKGLDTETTVEVAWCELQDRKLTKSERQR---FKEEAEXLKGLQHPNIVRFYDSWESTVK 99
Query: 221 DQNHRLLISEYMPNGTLQQHLHRHN-NRYRPLDWRTRLIIALDCAMALEFLHEHATPPVI 279
+ +L++E +GTL+ +L R + + L R I+ L+FLH TPP+I
Sbjct: 100 GKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILK-----GLQFLHTR-TPPII 153
Query: 280 HRDFKCSNVLLDQ-NFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTT 338
HRD KC N+ + K+ D GLA + + V+GT + APE K
Sbjct: 154 HRDLKCDNIFITGPTGSVKIGDLGLATLK----RASFAKAVIGTPEFXAPEXYEE-KYDE 208
Query: 339 KSDVYSYGVVLLELLTGRVP 358
DVY++G LE T P
Sbjct: 209 SVDVYAFGXCXLEXATSEYP 228
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 109/262 (41%), Gaps = 32/262 (12%)
Query: 182 AIKKLHRDGKQRER-AFRMEVDLLSRL-HSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
A+K L E+ A E+ ++S L +V LLG C L+I+EY G L
Sbjct: 80 AVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLN 139
Query: 240 HLHR---------HNNRYRP---LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSN 287
L R +N + P L R L + A + FL A+ IHRD N
Sbjct: 140 FLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARN 196
Query: 288 VLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGV 347
VLL AK+ DFGLA+ + + N + ++APE T +SDV+SYG+
Sbjct: 197 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 256
Query: 348 VLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXXXX 407
+L E+ + + N PG +LV+ +L ++ +M P+ PK
Sbjct: 257 LLWEIFS----LGLNPYPG--ILVNSKFYKLV--KDGYQMAQPAFA---PKN----IYSI 301
Query: 408 XXVCVQPEAAYRPLMTDVVQSL 429
C E +RP + L
Sbjct: 302 MQACWALEPTHRPTFQQICSFL 323
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 13/166 (7%)
Query: 197 FRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTR 256
F E D+++ +SP +V+L D + ++ EYMP G L + ++ P W
Sbjct: 122 FWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD---VPEKWAK- 177
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIS 316
+ +AL+ +H +IHRD K N+LLD++ K+ DFG M D+
Sbjct: 178 -FYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTC-MKMDETGMVHC 232
Query: 317 TRVLGTTGYLAPEY----ASTGKLTTKSDVYSYGVVLLELLTGRVP 358
+GT Y++PE G + D +S GV L E+L G P
Sbjct: 233 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 178 GTVAAIKKLHRDGKQ--RERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNG 235
G V A K +H + K R + R E+ +L +SP +V G + E+M G
Sbjct: 93 GLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 151
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L Q L + P ++ IA+ L +L E ++HRD K SN+L++
Sbjct: 152 SLDQVLKKAGRI--PEQILGKVSIAV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGE 205
Query: 296 AKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTG 355
K+ DFG VS ++ ++ +GT Y++PE + +SD++S G+ L+E+ G
Sbjct: 206 IKLCDFG----VSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261
Query: 356 RVPVDP 361
R P+ P
Sbjct: 262 RYPIPP 267
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+ G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P + P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEP 243
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 12/155 (7%)
Query: 210 PQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEF 269
P LV+L D ++ ++ EY P G + HL R P R A + E+
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEP---HARFYAA-QIVLTFEY 157
Query: 270 LHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE 329
LH + +I+RD K N+L+DQ KV DFG AK V + + + GT YLAPE
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLCGTPEYLAPE 209
Query: 330 YASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
+ D ++ GV++ E+ G P ++P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+ G + HL R P R
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARFYA 168
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK ++ G T +
Sbjct: 169 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGATWT-L 219
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 220 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+ G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+++DQ +VTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 107/260 (41%), Gaps = 30/260 (11%)
Query: 182 AIKKLHRDGKQRER-AFRMEVDLLSRL-HSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
A+K L E+ A E+ ++S L +V LLG C L+I+EY G L
Sbjct: 80 AVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLN 139
Query: 240 HLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEH----------ATPPVIHRDFKCSNVL 289
L R + R L+ IA A + LH A+ IHRD NVL
Sbjct: 140 FLRRKS---RVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL 196
Query: 290 LDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVL 349
L AK+ DFGLA+ + + N + ++APE T +SDV+SYG++L
Sbjct: 197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 256
Query: 350 LELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXX 409
E+ + + N PG +LV+ +L ++ +M P+ PK
Sbjct: 257 WEIFS----LGLNPYPG--ILVNSKFYKLV--KDGYQMAQPAFA---PKN----IYSIMQ 301
Query: 410 VCVQPEAAYRPLMTDVVQSL 429
C E +RP + L
Sbjct: 302 ACWALEPTHRPTFQQICSFL 321
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 92/185 (49%), Gaps = 19/185 (10%)
Query: 177 DGTVAAIKKLH---RDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMP 233
DG IK+++ K+RE + R EV +L+ + P +V+ + ++ +Y
Sbjct: 48 DGRQYVIKEINISRMSSKEREES-RREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCE 106
Query: 234 NGTLQQHLHRHNNRY----RPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
G L + ++ + LDW ++ +AL+ +H+ ++HRD K N+
Sbjct: 107 GGDLFKRINAQKGVLFQEDQILDWFVQI------CLALKHVHDRK---ILHRDIKSQNIF 157
Query: 290 LDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVL 349
L ++ ++ DFG+A++++ + +++ +GT YL+PE KSD+++ G VL
Sbjct: 158 LTKDGTVQLGDFGIARVLNSTV--ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVL 215
Query: 350 LELLT 354
EL T
Sbjct: 216 YELCT 220
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 178 GTVAAIKKLHRDGKQ--RERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNG 235
G V A K +H + K R + R E+ +L +SP +V G + E+M G
Sbjct: 31 GLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 89
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L Q L + P ++ IA+ L +L E ++HRD K SN+L++
Sbjct: 90 SLDQVLKKAGRI--PEQILGKVSIAV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGE 143
Query: 296 AKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTG 355
K+ DFG VS ++ ++ +GT Y++PE + +SD++S G+ L+E+ G
Sbjct: 144 IKLCDFG----VSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
Query: 356 RVPVDP 361
R P+ P
Sbjct: 200 RYPIPP 205
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 10/181 (5%)
Query: 179 TVAAIKKLHRDGKQRER-AFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTL 237
T A+K ++ RER F E ++ +V LLG + L++ E M +G L
Sbjct: 47 TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 106
Query: 238 QQHLHR-----HNNRYRPLDWRTRLI-IALDCAMALEFLHEHATPPVIHRDFKCSNVLLD 291
+ +L NN RP +I +A + A + +L+ +HRD N ++
Sbjct: 107 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVA 163
Query: 292 QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLE 351
+F K+ DFG+ + + + + + L ++APE G TT SD++S+GVVL E
Sbjct: 164 HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE 223
Query: 352 L 352
+
Sbjct: 224 I 224
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 178 GTVAAIKKLHRDGKQ--RERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNG 235
G V A K +H + K R + R E+ +L +SP +V G + E+M G
Sbjct: 31 GLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 89
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L Q L + P ++ IA+ L +L E ++HRD K SN+L++
Sbjct: 90 SLDQVLKKAGRI--PEQILGKVSIAV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGE 143
Query: 296 AKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTG 355
K+ DFG VS ++ ++ +GT Y++PE + +SD++S G+ L+E+ G
Sbjct: 144 IKLCDFG----VSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
Query: 356 RVPVDP 361
R P+ P
Sbjct: 200 RYPIPP 205
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 92/189 (48%), Gaps = 15/189 (7%)
Query: 178 GTVAAIKKLHRDGKQRE-RAFRMEVDLLSRL-HSPQLVELLGYCADQNHRLLISEYMPNG 235
G + A+K++ ++E + M++D++ R P +V+ G + + E M
Sbjct: 47 GQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTS 106
Query: 236 --TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQN 293
++++ + P + ++ +A AL L E+ +IHRD K SN+LLD++
Sbjct: 107 FDKFYKYVYSVLDDVIPEEILGKITLA--TVKALNHLKENLK--IIHRDIKPSNILLDRS 162
Query: 294 FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEY----ASTGKLTTKSDVYSYGVVL 349
K+ DFG++ + D I TR G Y+APE AS +SDV+S G+ L
Sbjct: 163 GNIKLCDFGISGQLVDSIA---KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITL 219
Query: 350 LELLTGRVP 358
EL TGR P
Sbjct: 220 YELATGRFP 228
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 19/169 (11%)
Query: 197 FRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTR 256
F E D+++ +SP +V+L D + ++ EYMP G L + ++ P W R
Sbjct: 116 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKW-AR 171
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIS 316
A + +AL+ +H IHRD K N+LLD++ K+ DFG K+N +
Sbjct: 172 FYTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCM----KMNKEGM 223
Query: 317 TR---VLGTTGYLAPEYAST----GKLTTKSDVYSYGVVLLELLTGRVP 358
R +GT Y++PE + G + D +S GV L E+L G P
Sbjct: 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 13/166 (7%)
Query: 197 FRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTR 256
F E D+++ +SP +V+L D + ++ EYMP G L + ++ P W R
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKW-AR 176
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIS 316
A + +AL+ +H IHRD K N+LLD++ K+ DFG ++ + +
Sbjct: 177 FYTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD 232
Query: 317 TRVLGTTGYLAPEYAST----GKLTTKSDVYSYGVVLLELLTGRVP 358
T V GT Y++PE + G + D +S GV L E+L G P
Sbjct: 233 TAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 17/190 (8%)
Query: 178 GTVAAIKKLHRDGKQ--RERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNG 235
G V A K +H + K R + R E+ +L +SP +V G + E+M G
Sbjct: 34 GLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 92
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L Q L + P ++ IA+ L +L E ++HRD K SN+L++
Sbjct: 93 SLDQVLKKAGRI--PEQILGKVSIAV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGE 146
Query: 296 AKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTG 355
K+ DFG VS ++ +++ +GT Y++PE + +SD++S G+ L+E+ G
Sbjct: 147 IKLCDFG----VSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 202
Query: 356 RVPVDPNRPP 365
R P RPP
Sbjct: 203 RYP----RPP 208
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 178 GTVAAIKKLHRDGKQ--RERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNG 235
G V A K +H + K R + R E+ +L +SP +V G + E+M G
Sbjct: 31 GLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 89
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L Q L + P ++ IA+ L +L E ++HRD K SN+L++
Sbjct: 90 SLDQVLKKAGRI--PEQILGKVSIAV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGE 143
Query: 296 AKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTG 355
K+ DFG VS ++ ++ +GT Y++PE + +SD++S G+ L+E+ G
Sbjct: 144 IKLCDFG----VSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
Query: 356 RVPVDP 361
R P+ P
Sbjct: 200 RYPIPP 205
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 178 GTVAAIKKLHRDGKQ--RERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNG 235
G V A K +H + K R + R E+ +L +SP +V G + E+M G
Sbjct: 31 GLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 89
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L Q L + P ++ IA+ L +L E ++HRD K SN+L++
Sbjct: 90 SLDQVLKKAGRI--PEQILGKVSIAV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGE 143
Query: 296 AKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTG 355
K+ DFG VS ++ ++ +GT Y++PE + +SD++S G+ L+E+ G
Sbjct: 144 IKLCDFG----VSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
Query: 356 RVPVDP 361
R P+ P
Sbjct: 200 RYPIPP 205
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+ G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ ++ G P ++P
Sbjct: 199 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQP 243
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 19/169 (11%)
Query: 197 FRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTR 256
F E D+++ +SP +V+L D + ++ EYMP G L + ++ P W R
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKW-AR 176
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIS 316
A + +AL+ +H IHRD K N+LLD++ K+ DFG K+N +
Sbjct: 177 FYTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCM----KMNKEGM 228
Query: 317 TR---VLGTTGYLAPEYAST----GKLTTKSDVYSYGVVLLELLTGRVP 358
R +GT Y++PE + G + D +S GV L E+L G P
Sbjct: 229 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 10/163 (6%)
Query: 199 MEVDLLSRLHSPQLVELLGYCADQNHRL-LISEYMPNGTLQQHLHRHNNRYRPLDWRTRL 257
+E +L+ P + L C RL + EY+ G L H+ + P +
Sbjct: 390 VEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP----HAV 445
Query: 258 IIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIST 317
A + A+ L FL +I+RD K NV+LD K+ DFG+ K + +G +
Sbjct: 446 FYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTK 500
Query: 318 RVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVD 360
GT Y+APE + D +++GV+L E+L G+ P +
Sbjct: 501 XFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 11/144 (7%)
Query: 218 YCADQNHR--LLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHAT 275
+C Q + EY+ G L H+ + D A + + L+FLH
Sbjct: 85 FCTFQTKENLFFVMEYLNGGDLMYHIQSCHK----FDLSRATFYAAEIILGLQFLHSKG- 139
Query: 276 PPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK 335
+++RD K N+LLD++ K+ DFG+ K + + + GT Y+APE K
Sbjct: 140 --IVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNEFCGTPDYIAPEILLGQK 195
Query: 336 LTTKSDVYSYGVVLLELLTGRVPV 359
D +S+GV+L E+L G+ P
Sbjct: 196 YNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Query: 178 GTVAAIKKLHRDGKQ--RERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNG 235
G V A K +H + K R + R E+ +L +SP +V G + E+M G
Sbjct: 58 GLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 116
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L Q L + P ++ IA+ L +L E ++HRD K SN+L++
Sbjct: 117 SLDQVLKKAGRI--PEQILGKVSIAV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGE 170
Query: 296 AKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTG 355
K+ DFG VS ++ ++ +GT Y++PE + +SD++S G+ L+E+ G
Sbjct: 171 IKLCDFG----VSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226
Query: 356 RVPVDP 361
R P+ P
Sbjct: 227 RYPIPP 232
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 106/260 (40%), Gaps = 30/260 (11%)
Query: 182 AIKKLHRDGKQRER-AFRMEVDLLSRL-HSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
A+K L E+ A E+ ++S L +V LLG C L+I+EY G L
Sbjct: 80 AVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLN 139
Query: 240 HLHRHNNRYRP----------LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
L R + L R L + A + FL A+ IHRD NVL
Sbjct: 140 FLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVL 196
Query: 290 LDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVL 349
L AK+ DFGLA+ + + N + ++APE T +SDV+SYG++L
Sbjct: 197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 256
Query: 350 LELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXX 409
E+ + + N PG +LV+ +L ++ +M P+ PK
Sbjct: 257 WEIFS----LGLNPYPG--ILVNSKFYKLV--KDGYQMAQPAFA---PKN----IYSIMQ 301
Query: 410 VCVQPEAAYRPLMTDVVQSL 429
C E +RP + L
Sbjct: 302 ACWALEPTHRPTFQQICSFL 321
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+ G + HL R P R
Sbjct: 78 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARFYA 134
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+D+ +VTDFG AK V + + +
Sbjct: 135 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR-----TWXL 185
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAPE + D ++ GV++ E+ G P ++P
Sbjct: 186 CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 230
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 12/182 (6%)
Query: 180 VAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
+ I K + ++ FR EV ++ L+ P +V+L + LI EY G +
Sbjct: 42 IKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFD 100
Query: 240 HLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVT 299
+L H R + + R++ A+++ H+ ++HRD K N+LLD + K+
Sbjct: 101 YLVAHG-RMKEKEARSKF---RQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIA 153
Query: 300 DFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTT-KSDVYSYGVVLLELLTGRVP 358
DFG + + + G++ T G+ Y APE K + DV+S GV+L L++G +P
Sbjct: 154 DFGFSNEFT--VGGKLDT-FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 210
Query: 359 VD 360
D
Sbjct: 211 FD 212
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 10/184 (5%)
Query: 175 LSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
++ G AI++++ + ++ E+ ++ +P +V L + ++ EY+
Sbjct: 43 VATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG 102
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
G+L + +D + +C ALEFLH + VIHR+ K N+LL +
Sbjct: 103 GSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSNQ---VIHRNIKSDNILLGMDG 154
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
K+TDFG ++ + + ST V GT ++APE + K D++S G++ +E++
Sbjct: 155 SVKLTDFGFCAQITPE-QSKRSTMV-GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 212
Query: 355 GRVP 358
G P
Sbjct: 213 GEPP 216
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 19/159 (11%)
Query: 203 LLSRLHSPQLVELLGYCADQNHRL-LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIAL 261
L++LHS C RL + EY+ G L H+ + P + A
Sbjct: 82 FLTQLHS---------CFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP----HAVFYAA 128
Query: 262 DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLG 321
+ A+ L FL +I+RD K NV+LD K+ DFG+ K + +G + G
Sbjct: 129 EIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCG 183
Query: 322 TTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVD 360
T Y+APE + D +++GV+L E+L G+ P +
Sbjct: 184 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 11/144 (7%)
Query: 218 YCADQNHR--LLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHAT 275
+C Q + EY+ G L H+ + D A + + L+FLH
Sbjct: 84 FCTFQTKENLFFVMEYLNGGDLMYHIQSCHK----FDLSRATFYAAEIILGLQFLHSKG- 138
Query: 276 PPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK 335
+++RD K N+LLD++ K+ DFG+ K + + + GT Y+APE K
Sbjct: 139 --IVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTNXFCGTPDYIAPEILLGQK 194
Query: 336 LTTKSDVYSYGVVLLELLTGRVPV 359
D +S+GV+L E+L G+ P
Sbjct: 195 YNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 89/163 (54%), Gaps = 14/163 (8%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +++ +L +P +V ++G C ++ +L+ E G L ++L + NR+ + + II
Sbjct: 420 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQ--NRHV----KDKNII 472
Query: 260 AL--DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMV-SDKINGQIS 316
L +M +++L E +HRD NVLL AK++DFGL+K + +D+ +
Sbjct: 473 ELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
T + APE + K ++KSDV+S+GV++ E + G+ P
Sbjct: 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 89/163 (54%), Gaps = 14/163 (8%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +++ +L +P +V ++G C ++ +L+ E G L ++L + NR+ + + II
Sbjct: 421 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQ--NRHV----KDKNII 473
Query: 260 AL--DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMV-SDKINGQIS 316
L +M +++L E +HRD NVLL AK++DFGL+K + +D+ +
Sbjct: 474 ELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 530
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
T + APE + K ++KSDV+S+GV++ E + G+ P
Sbjct: 531 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 192 QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPL 251
QRE+ ME+ + L +V G+ D + ++ E +L + LH+
Sbjct: 64 QREK-MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEP 121
Query: 252 DWRTRL-IIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDK 310
+ R L I L C ++LH + VIHRD K N+ L+++ K+ DFGLA V +
Sbjct: 122 EARYYLRQIVLGC----QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKV--E 172
Query: 311 INGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVD 360
+G+ + GT Y+APE S + + DV+S G ++ LL G+ P +
Sbjct: 173 YDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 10/181 (5%)
Query: 179 TVAAIKKLHRDGKQRER-AFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTL 237
T A+K ++ RER F E ++ +V LLG + L++ E M +G L
Sbjct: 49 TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 108
Query: 238 QQHLHR-----HNNRYRPLDWRTRLI-IALDCAMALEFLHEHATPPVIHRDFKCSNVLLD 291
+ +L NN RP +I +A + A + +L+ +HR+ N ++
Sbjct: 109 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVA 165
Query: 292 QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLE 351
+F K+ DFG+ + + + + + L ++APE G TT SD++S+GVVL E
Sbjct: 166 HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE 225
Query: 352 L 352
+
Sbjct: 226 I 226
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTL-QQHLHRHNNRYRPLDWRTRLI 258
E+ LL L P +++L D+ + L++E+ G L +Q ++RH ++ D
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAAN--- 150
Query: 259 IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQN---FRAKVTDFGLAKMVSDKINGQI 315
I + +LH+H ++HRD K N+LL+ K+ DFGL+ S + ++
Sbjct: 151 IMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK--DYKL 205
Query: 316 STRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
R LGT Y+APE K K DV+S GV++ LL G P
Sbjct: 206 RDR-LGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 10/181 (5%)
Query: 179 TVAAIKKLHRDGKQRER-AFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTL 237
T A+K ++ RER F E ++ +V LLG + L++ E M +G L
Sbjct: 48 TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL 107
Query: 238 QQHLHR-----HNNRYRPLDWRTRLI-IALDCAMALEFLHEHATPPVIHRDFKCSNVLLD 291
+ +L NN RP +I +A + A + +L+ +HR+ N ++
Sbjct: 108 KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVA 164
Query: 292 QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLE 351
+F K+ DFG+ + + + + + L ++APE G TT SD++S+GVVL E
Sbjct: 165 HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE 224
Query: 352 L 352
+
Sbjct: 225 I 225
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+ G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT YLAP + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 10/184 (5%)
Query: 176 SDGTVAAIKKLHRDGKQRERAFRM---EVDLLSRLHSPQLVELLGYCADQNHRLL--ISE 230
SDG + K+L G E +M EV+LL L P +V D+ + L + E
Sbjct: 29 SDGKILVWKELDY-GSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME 87
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATP--PVIHRDFKCSNV 288
Y G L + + + LD L + +AL+ H + V+HRD K +NV
Sbjct: 88 YCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANV 147
Query: 289 LLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
LD K+ DFGLA++++ + + +GT Y++PE + KSD++S G +
Sbjct: 148 FLDGKQNVKLGDFGLARILNH--DEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCL 205
Query: 349 LLEL 352
L EL
Sbjct: 206 LYEL 209
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 198 RMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRL 257
+ E+ +LS+ SP + G +I EY+ G+ L + PL+
Sbjct: 65 QQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL-----KPGPLEETYIA 119
Query: 258 IIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIS- 316
I + L++LH IHRD K +NVLL + K+ DFG+A ++D QI
Sbjct: 120 TILREILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDT---QIKR 173
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALP 376
+GT ++APE K+D++S G+ +EL G P P + V + +P
Sbjct: 174 NXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHP----MRVLFLIP 229
Query: 377 RLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQ 427
+ + P+L+GQ+ K C+ + +RP ++++
Sbjct: 230 KNSP---------PTLEGQHSK----PFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 192 QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPL 251
QRE+ ME+ + L +V G+ D + ++ E +L + LH+
Sbjct: 60 QREK-MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEP 117
Query: 252 DWRTRL-IIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDK 310
+ R L I L C ++LH + VIHRD K N+ L+++ K+ DFGLA V +
Sbjct: 118 EARYYLRQIVLGC----QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKV--E 168
Query: 311 INGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVD 360
+G+ + GT Y+APE S + + DV+S G ++ LL G+ P +
Sbjct: 169 YDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 192 QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPL 251
QRE+ ME+ + L +V G+ D + ++ E +L + LH+
Sbjct: 60 QREK-MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEP 117
Query: 252 DWRTRL-IIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDK 310
+ R L I L C ++LH + VIHRD K N+ L+++ K+ DFGLA V +
Sbjct: 118 EARYYLRQIVLGC----QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKV--E 168
Query: 311 INGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVD 360
+G+ + GT Y+APE S + + DV+S G ++ LL G+ P +
Sbjct: 169 YDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 192 QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPL 251
QRE+ ME+ + L +V G+ D + ++ E +L + LH+
Sbjct: 84 QREK-MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEP 141
Query: 252 DWRTRL-IIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDK 310
+ R L I L C ++LH + VIHRD K N+ L+++ K+ DFGLA V +
Sbjct: 142 EARYYLRQIVLGC----QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKV--E 192
Query: 311 INGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVD 360
+G+ + GT Y+APE S + + DV+S G ++ LL G+ P +
Sbjct: 193 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 69/157 (43%), Gaps = 10/157 (6%)
Query: 204 LSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDC 263
L+R H P L +L + + E++ G L H+ + R D A +
Sbjct: 79 LARNH-PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKS----RRFDEARARFYAAEI 133
Query: 264 AMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTT 323
AL FLH+ +I+RD K NVLLD K+ DFG+ K NG + GT
Sbjct: 134 ISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTP 188
Query: 324 GYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVD 360
Y+APE D ++ GV+L E+L G P +
Sbjct: 189 DYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Query: 216 LGYCADQNHRL-LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHA 274
L Y + RL + EY G L HL R R R A + ALE+LH
Sbjct: 75 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE---RARFYGA-EIVSALEYLH--- 127
Query: 275 TPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKM-VSDKINGQISTRVLGTTGYLAPEYAST 333
+ V++RD K N++LD++ K+TDFGL K +SD G GT YLAPE
Sbjct: 128 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKXFCGTPEYLAPEVLED 184
Query: 334 GKLTTKSDVYSYGVVLLELLTGRVP 358
D + GVV+ E++ GR+P
Sbjct: 185 NDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 89/163 (54%), Gaps = 14/163 (8%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +++ +L +P +V ++G C ++ +L+ E G L ++L + NR+ + + II
Sbjct: 76 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQ--NRHV----KDKNII 128
Query: 260 AL--DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMV-SDKINGQIS 316
L +M +++L E +HRD NVLL AK++DFGL+K + +D+ +
Sbjct: 129 ELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 185
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
T + APE + K ++KSDV+S+GV++ E + G+ P
Sbjct: 186 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Query: 216 LGYCADQNHRL-LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHA 274
L Y + RL + EY G L HL R R R A + ALE+LH
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE---RARFYGA-EIVSALEYLH--- 122
Query: 275 TPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKM-VSDKINGQISTRVLGTTGYLAPEYAST 333
+ V++RD K N++LD++ K+TDFGL K +SD G GT YLAPE
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKXFCGTPEYLAPEVLED 179
Query: 334 GKLTTKSDVYSYGVVLLELLTGRVP 358
D + GVV+ E++ GR+P
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 192 QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPL 251
QRE+ ME+ + L +V G+ D + ++ E +L + LH+
Sbjct: 82 QREK-MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEP 139
Query: 252 DWRTRL-IIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDK 310
+ R L I L C ++LH + VIHRD K N+ L+++ K+ DFGLA V +
Sbjct: 140 EARYYLRQIVLGC----QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKV--E 190
Query: 311 INGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVD 360
+G+ + GT Y+APE S + + DV+S G ++ LL G+ P +
Sbjct: 191 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 10/184 (5%)
Query: 176 SDGTVAAIKKLHRDGKQRERAFRM---EVDLLSRLHSPQLVELLGYCADQNHRLL--ISE 230
SDG + K+L G E +M EV+LL L P +V D+ + L + E
Sbjct: 29 SDGKILVWKELDY-GSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME 87
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATP--PVIHRDFKCSNV 288
Y G L + + + LD L + +AL+ H + V+HRD K +NV
Sbjct: 88 YCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANV 147
Query: 289 LLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
LD K+ DFGLA++++ + + +GT Y++PE + KSD++S G +
Sbjct: 148 FLDGKQNVKLGDFGLARILNH--DTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCL 205
Query: 349 LLEL 352
L EL
Sbjct: 206 LYEL 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 10/184 (5%)
Query: 176 SDGTVAAIKKLHRDGKQRERAFRM---EVDLLSRLHSPQLVELLGYCADQNHRLL--ISE 230
SDG + K+L G E +M EV+LL L P +V D+ + L + E
Sbjct: 29 SDGKILVWKELDY-GSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME 87
Query: 231 YMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATP--PVIHRDFKCSNV 288
Y G L + + + LD L + +AL+ H + V+HRD K +NV
Sbjct: 88 YCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANV 147
Query: 289 LLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
LD K+ DFGLA++++ + + +GT Y++PE + KSD++S G +
Sbjct: 148 FLDGKQNVKLGDFGLARILNH--DTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCL 205
Query: 349 LLEL 352
L EL
Sbjct: 206 LYEL 209
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 89/163 (54%), Gaps = 14/163 (8%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +++ +L +P +V ++G C ++ +L+ E G L ++L + NR+ + + II
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQ--NRHV----KDKNII 114
Query: 260 AL--DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMV-SDKINGQIS 316
L +M +++L E +HRD NVLL AK++DFGL+K + +D+ +
Sbjct: 115 ELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQ 171
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
T + APE + K ++KSDV+S+GV++ E + G+ P
Sbjct: 172 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 89/163 (54%), Gaps = 14/163 (8%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +++ +L +P +V ++G C ++ +L+ E G L ++L + NR+ + + II
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQ--NRHV----KDKNII 130
Query: 260 AL--DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMV-SDKINGQIS 316
L +M +++L E +HRD NVLL AK++DFGL+K + +D+ +
Sbjct: 131 ELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 187
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
T + APE + K ++KSDV+S+GV++ E + G+ P
Sbjct: 188 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 89/163 (54%), Gaps = 14/163 (8%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +++ +L +P +V ++G C ++ +L+ E G L ++L + NR+ + + II
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQ--NRHV----KDKNII 130
Query: 260 AL--DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMV-SDKINGQIS 316
L +M +++L E +HRD NVLL AK++DFGL+K + +D+ +
Sbjct: 131 ELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 187
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
T + APE + K ++KSDV+S+GV++ E + G+ P
Sbjct: 188 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 11/189 (5%)
Query: 171 YKGVLSD-GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLIS 229
YK + + G + AIK++ + +E E+ ++ + SP +V+ G ++
Sbjct: 46 YKAIHKETGQIVAIKQVPVESDLQE--IIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
EY G++ + N + T L L LE+LH IHRD K N+L
Sbjct: 104 EYCGAGSVSDIIRLRNKTLTEDEIATILQSTLK---GLEYLHFMRK---IHRDIKAGNIL 157
Query: 290 LDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVL 349
L+ AK+ DFG+A ++D + + V+GT ++APE +D++S G+
Sbjct: 158 LNTEGHAKLADFGVAGQLTDXMAKR--NXVIGTPFWMAPEVIQEIGYNCVADIWSLGITA 215
Query: 350 LELLTGRVP 358
+E+ G+ P
Sbjct: 216 IEMAEGKPP 224
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 70/145 (48%), Gaps = 12/145 (8%)
Query: 216 LGYCADQNHRL-LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHA 274
L Y + RL + EY G L HL R + R R A + ALE+LH
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGA-EIVSALEYLH--- 122
Query: 275 TPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKM-VSDKINGQISTRVLGTTGYLAPEYAST 333
+ V++RD K N++LD++ K+TDFGL K +SD G GT YLAPE
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKXFCGTPEYLAPEVLED 179
Query: 334 GKLTTKSDVYSYGVVLLELLTGRVP 358
D + GVV+ E++ GR+P
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 192 QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPL 251
QRE+ ME+ + L +V G+ D + ++ E +L + LH+
Sbjct: 58 QREK-MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEP 115
Query: 252 DWRTRL-IIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDK 310
+ R L I L C ++LH + VIHRD K N+ L+++ K+ DFGLA V +
Sbjct: 116 EARYYLRQIVLGC----QYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKV--E 166
Query: 311 INGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVD 360
+G+ + GT Y+APE S + + DV+S G ++ LL G+ P +
Sbjct: 167 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 70/145 (48%), Gaps = 12/145 (8%)
Query: 216 LGYCADQNHRL-LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHA 274
L Y + RL + EY G L HL R + R R A + ALE+LH
Sbjct: 73 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGA-EIVSALEYLH--- 125
Query: 275 TPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKM-VSDKINGQISTRVLGTTGYLAPEYAST 333
+ V++RD K N++LD++ K+TDFGL K +SD G GT YLAPE
Sbjct: 126 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKTFCGTPEYLAPEVLED 182
Query: 334 GKLTTKSDVYSYGVVLLELLTGRVP 358
D + GVV+ E++ GR+P
Sbjct: 183 NDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 70/145 (48%), Gaps = 12/145 (8%)
Query: 216 LGYCADQNHRL-LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHA 274
L Y + RL + EY G L HL R + R R A + ALE+LH
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGA-EIVSALEYLH--- 122
Query: 275 TPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKM-VSDKINGQISTRVLGTTGYLAPEYAST 333
+ V++RD K N++LD++ K+TDFGL K +SD G GT YLAPE
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKXFCGTPEYLAPEVLED 179
Query: 334 GKLTTKSDVYSYGVVLLELLTGRVP 358
D + GVV+ E++ GR+P
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 70/145 (48%), Gaps = 12/145 (8%)
Query: 216 LGYCADQNHRL-LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHA 274
L Y + RL + EY G L HL R + R R A + ALE+LH
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGA-EIVSALEYLH--- 122
Query: 275 TPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKM-VSDKINGQISTRVLGTTGYLAPEYAST 333
+ V++RD K N++LD++ K+TDFGL K +SD G GT YLAPE
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKTFCGTPEYLAPEVLED 179
Query: 334 GKLTTKSDVYSYGVVLLELLTGRVP 358
D + GVV+ E++ GR+P
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Query: 216 LGYCADQNHRL-LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHA 274
L Y + RL + EY G L HL R + R R A + ALE+LH
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHLSRERVF---TEERARFYGA-EIVSALEYLHSR- 124
Query: 275 TPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKM-VSDKINGQISTRVLGTTGYLAPEYAST 333
V++RD K N++LD++ K+TDFGL K +SD G GT YLAPE
Sbjct: 125 --DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD---GATMKTFCGTPEYLAPEVLED 179
Query: 334 GKLTTKSDVYSYGVVLLELLTGRVP 358
D + GVV+ E++ GR+P
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L ++ P LV+L D ++ ++ EY+ G + HL R P R
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARFYA 147
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A + E+LH + +I+RD K N+L+DQ +VTDFG AK V + + +
Sbjct: 148 A-QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXL 198
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
GT LAPE + D ++ GV++ E+ G P ++P
Sbjct: 199 CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 89/163 (54%), Gaps = 14/163 (8%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +++ +L +P +V ++G C ++ +L+ E G L ++L + NR+ + + II
Sbjct: 56 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQ--NRHV----KDKNII 108
Query: 260 AL--DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMV-SDKINGQIS 316
L +M +++L E +HRD NVLL AK++DFGL+K + +D+ +
Sbjct: 109 ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 165
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
T + APE + K ++KSDV+S+GV++ E + G+ P
Sbjct: 166 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 89/163 (54%), Gaps = 14/163 (8%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +++ +L +P +V ++G C ++ +L+ E G L ++L + NR+ + + II
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQ--NRHV----KDKNII 114
Query: 260 AL--DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMV-SDKINGQIS 316
L +M +++L E +HRD NVLL AK++DFGL+K + +D+ +
Sbjct: 115 ELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 171
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
T + APE + K ++KSDV+S+GV++ E + G+ P
Sbjct: 172 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 178 GTVAAIKKLHRD-GKQRERAFRMEVDLLSR-LHSPQLVELLGYCADQNHRLLISEYMPNG 235
G + A+K++ Q ++ M++D+ R + P V G + + E M +
Sbjct: 76 GQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM-DT 134
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L + + ++ + + IA+ ALE LH + VIHRD K SNVL++ +
Sbjct: 135 SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQ 192
Query: 296 AKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYA----STGKLTTKSDVYSYGVVLLE 351
K+ DFG++ + D + I G Y+APE + + KSD++S G+ ++E
Sbjct: 193 VKMCDFGISGYLVDSVAKTIDA---GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIE 249
Query: 352 LLTGRVPVDPNRPPGEHV--LVSWALPRLTSREEAVEMVD 389
L R P D P + + +V P+L + + + E VD
Sbjct: 250 LAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVD 289
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 89/163 (54%), Gaps = 14/163 (8%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +++ +L +P +V ++G C ++ +L+ E G L ++L + NR+ + + II
Sbjct: 58 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQ--NRHV----KDKNII 110
Query: 260 AL--DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMV-SDKINGQIS 316
L +M +++L E +HRD NVLL AK++DFGL+K + +D+ +
Sbjct: 111 ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 167
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
T + APE + K ++KSDV+S+GV++ E + G+ P
Sbjct: 168 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 89/163 (54%), Gaps = 14/163 (8%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +++ +L +P +V ++G C ++ +L+ E G L ++L + NR+ + + II
Sbjct: 68 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQ--NRHV----KDKNII 120
Query: 260 AL--DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMV-SDKINGQIS 316
L +M +++L E +HRD NVLL AK++DFGL+K + +D+ +
Sbjct: 121 ELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 177
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
T + APE + K ++KSDV+S+GV++ E + G+ P
Sbjct: 178 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 216 LGYCADQNHRL-LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHA 274
L Y + RL + EY G L HL R R D R R A + AL++LH
Sbjct: 216 LKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSED-RARFYGA-EIVSALDYLHSEK 271
Query: 275 TPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTG 334
V++RD K N++LD++ K+TDFGL K +G GT YLAPE
Sbjct: 272 N--VVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDN 327
Query: 335 KLTTKSDVYSYGVVLLELLTGRVP 358
D + GVV+ E++ GR+P
Sbjct: 328 DYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 216 LGYCADQNHRL-LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHA 274
L Y + RL + EY G L HL R R D R R A + AL++LH
Sbjct: 213 LKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSED-RARFYGA-EIVSALDYLHSEK 268
Query: 275 TPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTG 334
V++RD K N++LD++ K+TDFGL K +G GT YLAPE
Sbjct: 269 N--VVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDN 324
Query: 335 KLTTKSDVYSYGVVLLELLTGRVP 358
D + GVV+ E++ GR+P
Sbjct: 325 DYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 216 LGYCADQNHRL-LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHA 274
L Y + RL + EY G L HL R R D R R A + AL++LH
Sbjct: 75 LKYSFQTHDRLCFVMEYANGGELFFHLSR--ERVFSED-RARFYGA-EIVSALDYLHSEK 130
Query: 275 TPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTG 334
V++RD K N++LD++ K+TDFGL K +G GT YLAPE
Sbjct: 131 N--VVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDN 186
Query: 335 KLTTKSDVYSYGVVLLELLTGRVP 358
D + GVV+ E++ GR+P
Sbjct: 187 DYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 216 LGYCADQNHRL-LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHA 274
L Y + RL + EY G L HL R R D R R A + AL++LH
Sbjct: 74 LKYSFQTHDRLCFVMEYANGGELFFHLSR--ERVFSED-RARFYGA-EIVSALDYLHSEK 129
Query: 275 TPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTG 334
V++RD K N++LD++ K+TDFGL K +G GT YLAPE
Sbjct: 130 N--VVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDN 185
Query: 335 KLTTKSDVYSYGVVLLELLTGRVP 358
D + GVV+ E++ GR+P
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 216 LGYCADQNHRL-LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHA 274
L Y + RL + EY G L HL R R D R R A + AL++LH
Sbjct: 73 LKYSFQTHDRLCFVMEYANGGELFFHLSR--ERVFSED-RARFYGA-EIVSALDYLHSEK 128
Query: 275 TPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTG 334
V++RD K N++LD++ K+TDFGL K +G GT YLAPE
Sbjct: 129 N--VVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDN 184
Query: 335 KLTTKSDVYSYGVVLLELLTGRVP 358
D + GVV+ E++ GR+P
Sbjct: 185 DYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 13/184 (7%)
Query: 178 GTVAAIKKLHRDGKQ--RERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNG 235
G V A K +H + K R + R E+ +L +SP +V G + E+M G
Sbjct: 50 GLVMARKLIHLEIKPAIRNQIIR-ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 108
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L Q L + P ++ IA+ L +L E ++HRD K SN+L++
Sbjct: 109 SLDQVLKKAGRI--PEQILGKVSIAV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGE 162
Query: 296 AKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTG 355
K+ DFG VS ++ ++ +GT Y++PE + +SD++S G+ L+E+ G
Sbjct: 163 IKLCDFG----VSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 218
Query: 356 RVPV 359
R P+
Sbjct: 219 RYPI 222
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 12/183 (6%)
Query: 179 TVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQ 238
+ I K + ++ FR EV ++ L+ P +V+L + LI EY G +
Sbjct: 44 AIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVF 102
Query: 239 QHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKV 298
+L H R + + R++ A+++ H+ ++HRD K N+LLD + K+
Sbjct: 103 DYLVAHG-RMKEKEARSKF---RQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKI 155
Query: 299 TDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTT-KSDVYSYGVVLLELLTGRV 357
DFG + + + G++ G Y APE K + DV+S GV+L L++G +
Sbjct: 156 ADFGFSNEFT--VGGKLDA-FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 212
Query: 358 PVD 360
P D
Sbjct: 213 PFD 215
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 178 GTVAAIKKLHRD-GKQRERAFRMEVDLLSR-LHSPQLVELLGYCADQNHRLLISEYMPNG 235
G + A+K++ Q ++ M++D+ R + P V G + + E M +
Sbjct: 32 GQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM-DT 90
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
+L + + ++ + + IA+ ALE LH + VIHRD K SNVL++ +
Sbjct: 91 SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQ 148
Query: 296 AKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYA----STGKLTTKSDVYSYGVVLLE 351
K+ DFG++ + D + I G Y+APE + + KSD++S G+ ++E
Sbjct: 149 VKMCDFGISGYLVDDVAKDIDA---GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIE 205
Query: 352 LLTGRVPVDPNRPPGEHV--LVSWALPRLTSREEAVEMVD 389
L R P D P + + +V P+L + + + E VD
Sbjct: 206 LAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVD 245
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTL 237
G + A+K + + R+ + E+ +L ++ +V L H L+ + + G L
Sbjct: 34 GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL 93
Query: 238 QQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQNF 294
R R + L+I A+++LHE+ ++HRD K N+L ++N
Sbjct: 94 ---FDRILERGVYTEKDASLVIQ-QVLSAVKYLHENG---IVHRDLKPENLLYLTPEENS 146
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
+ +TDFGL+KM + NG +ST GT GY+APE + + D +S GV+ LL
Sbjct: 147 KIMITDFGLSKM---EQNGIMST-ACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLC 202
Query: 355 GRVP 358
G P
Sbjct: 203 GYPP 206
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 104/240 (43%), Gaps = 30/240 (12%)
Query: 198 RMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRL 257
+ E+ +LS+ S + + G + +I EY+ G+ L R P D
Sbjct: 69 QQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLL-----RAGPFDEFQIA 123
Query: 258 IIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIS- 316
+ + L++LH IHRD K +NVLL + K+ DFG+A ++D QI
Sbjct: 124 TMLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDT---QIKR 177
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALP 376
+GT ++APE +K+D++S G+ +EL G P P + V + +P
Sbjct: 178 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHP----MRVLFLIP 233
Query: 377 RLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQSLIPVVKNN 436
+ P+L G + K C+ + ++RP ++++ +VKN+
Sbjct: 234 KNNP---------PTLVGDFTK----SFKEFIDACLNKDPSFRPTAKELLKHKF-IVKNS 279
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 12/182 (6%)
Query: 180 VAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
V I K + ++ FR EV ++ L+ P +V+L + L+ EY G +
Sbjct: 45 VKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD 103
Query: 240 HLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVT 299
+L H R + + R + A+++ H+ ++HRD K N+LLD + K+
Sbjct: 104 YLVAHG-RMKEKEARAKF---RQIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIA 156
Query: 300 DFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTT-KSDVYSYGVVLLELLTGRVP 358
DFG + + + ++ T G+ Y APE K + DV+S GV+L L++G +P
Sbjct: 157 DFGFSNEFT--VGNKLDT-FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
Query: 359 VD 360
D
Sbjct: 214 FD 215
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 12/182 (6%)
Query: 180 VAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
V I K + ++ FR EV ++ L+ P +V+L + L+ EY G +
Sbjct: 44 VKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD 102
Query: 240 HLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVT 299
+L H R + + R + A+++ H+ ++HRD K N+LLD + K+
Sbjct: 103 YLVAHG-RMKEKEARAKF---RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIA 155
Query: 300 DFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTT-KSDVYSYGVVLLELLTGRVP 358
DFG + + ++ T G+ Y APE K + DV+S GV+L L++G +P
Sbjct: 156 DFGFSNEFT--FGNKLDT-FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 359 VD 360
D
Sbjct: 213 FD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 12/182 (6%)
Query: 180 VAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
V I K + ++ FR EV ++ L+ P +V+L + L+ EY G +
Sbjct: 44 VKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD 102
Query: 240 HLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVT 299
+L H R + + R + A+++ H+ ++HRD K N+LLD + K+
Sbjct: 103 YLVAHG-RMKEKEARAKF---RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIA 155
Query: 300 DFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTT-KSDVYSYGVVLLELLTGRVP 358
DFG + + ++ T G+ Y APE K + DV+S GV+L L++G +P
Sbjct: 156 DFGFSNEFT--FGNKLDT-FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 359 VD 360
D
Sbjct: 213 FD 214
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 12/182 (6%)
Query: 180 VAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
V I K + ++ FR EV ++ L+ P +V+L + L+ EY G +
Sbjct: 44 VRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD 102
Query: 240 HLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVT 299
+L H R + + R + A+++ H+ ++HRD K N+LLD + K+
Sbjct: 103 YLVAHG-RMKEKEARAKF---RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIA 155
Query: 300 DFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTT-KSDVYSYGVVLLELLTGRVP 358
DFG + ++ G G+ Y APE K + DV+S GV+L L++G +P
Sbjct: 156 DFGFS---NEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 359 VD 360
D
Sbjct: 213 FD 214
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 28/210 (13%)
Query: 179 TVAAIKKLHRDGKQRE-RAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTL 237
T A+K L + E R E ++L +++ P +++L G C+ LLI EY G+L
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 238 QQHLHRHNNRYRP---------------------LDWRTRLIIALDCAMALEFLHEHATP 276
+ L R + + P L + A + +++L E +
Sbjct: 114 RGFL-RESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS-- 170
Query: 277 PVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
++HRD N+L+ + + K++DFGL++ V ++ + ++ ++A E
Sbjct: 171 -LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIY 229
Query: 337 TTKSDVYSYGVVLLELLT-GRVPVDPNRPP 365
TT+SDV+S+GV+L E++T G P P PP
Sbjct: 230 TTQSDVWSFGVLLWEIVTLGGNPY-PGIPP 258
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 39/201 (19%)
Query: 179 TVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLV-------ELLGYCADQNHRLLISEY 231
T A+K L D +++ + DL+S + +++ LLG C +I EY
Sbjct: 53 TKVAVKMLKSDATEKDLS-----DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEY 107
Query: 232 MPNGTLQQHL---------HRHNNRYRP---LDWRTRLIIALDCAMALEFLHEHATPPVI 279
G L+++L + +N + P L + + A A +E+L A+ I
Sbjct: 108 ASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCI 164
Query: 280 HRDFKCSNVLLDQNFRAKVTDFGLAKMV------SDKINGQISTRVLGTTGYLAPEYAST 333
HRD NVL+ ++ K+ DFGLA+ + NG++ + ++APE
Sbjct: 165 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK------WMAPEALFD 218
Query: 334 GKLTTKSDVYSYGVVLLELLT 354
T +SDV+S+GV+L E+ T
Sbjct: 219 RIYTHQSDVWSFGVLLWEIFT 239
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 39/201 (19%)
Query: 179 TVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLV-------ELLGYCADQNHRLLISEY 231
T A+K L D +++ + DL+S + +++ LLG C +I EY
Sbjct: 61 TKVAVKMLKSDATEKDLS-----DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEY 115
Query: 232 MPNGTLQQHL---------HRHNNRYRP---LDWRTRLIIALDCAMALEFLHEHATPPVI 279
G L+++L + +N + P L + + A A +E+L A+ I
Sbjct: 116 ASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCI 172
Query: 280 HRDFKCSNVLLDQNFRAKVTDFGLAKMV------SDKINGQISTRVLGTTGYLAPEYAST 333
HRD NVL+ ++ K+ DFGLA+ + NG++ + ++APE
Sbjct: 173 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK------WMAPEALFD 226
Query: 334 GKLTTKSDVYSYGVVLLELLT 354
T +SDV+S+GV+L E+ T
Sbjct: 227 RIYTHQSDVWSFGVLLWEIFT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 39/201 (19%)
Query: 179 TVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLV-------ELLGYCADQNHRLLISEY 231
T A+K L D +++ + DL+S + +++ LLG C +I EY
Sbjct: 61 TKVAVKMLKSDATEKDLS-----DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEY 115
Query: 232 MPNGTLQQHL---------HRHNNRYRP---LDWRTRLIIALDCAMALEFLHEHATPPVI 279
G L+++L + +N + P L + + A A +E+L A+ I
Sbjct: 116 ASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCI 172
Query: 280 HRDFKCSNVLLDQNFRAKVTDFGLAKMV------SDKINGQISTRVLGTTGYLAPEYAST 333
HRD NVL+ ++ K+ DFGLA+ + NG++ + ++APE
Sbjct: 173 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK------WMAPEALFD 226
Query: 334 GKLTTKSDVYSYGVVLLELLT 354
T +SDV+S+GV+L E+ T
Sbjct: 227 RIYTHQSDVWSFGVLLWEIFT 247
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 12/182 (6%)
Query: 180 VAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
V I K + ++ FR EV ++ L+ P +V+L + L+ EY G +
Sbjct: 44 VRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD 102
Query: 240 HLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVT 299
+L H R + + R + A+++ H+ ++HRD K N+LLD + K+
Sbjct: 103 YLVAHG-RMKEKEARAKF---RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIA 155
Query: 300 DFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTT-KSDVYSYGVVLLELLTGRVP 358
DFG + + ++ T G+ Y APE K + DV+S GV+L L++G +P
Sbjct: 156 DFGFSNEFT--FGNKLDT-FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 359 VD 360
D
Sbjct: 213 FD 214
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 39/201 (19%)
Query: 179 TVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLV-------ELLGYCADQNHRLLISEY 231
T A+K L D +++ + DL+S + +++ LLG C +I EY
Sbjct: 54 TKVAVKMLKSDATEKDLS-----DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEY 108
Query: 232 MPNGTLQQHL---------HRHNNRYRP---LDWRTRLIIALDCAMALEFLHEHATPPVI 279
G L+++L + +N + P L + + A A +E+L A+ I
Sbjct: 109 ASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCI 165
Query: 280 HRDFKCSNVLLDQNFRAKVTDFGLAKMV------SDKINGQISTRVLGTTGYLAPEYAST 333
HRD NVL+ ++ K+ DFGLA+ + NG++ + ++APE
Sbjct: 166 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK------WMAPEALFD 219
Query: 334 GKLTTKSDVYSYGVVLLELLT 354
T +SDV+S+GV+L E+ T
Sbjct: 220 RIYTHQSDVWSFGVLLWEIFT 240
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 84/188 (44%), Gaps = 18/188 (9%)
Query: 181 AAIKKLH--RDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQ 238
AIK L +G RE FR E L +RL P +V LLG +I Y +G L
Sbjct: 42 VAIKTLKDKAEGPLREE-FRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLH 100
Query: 239 QHL---HRHNNRYRPLDWRT---------RLIIALDCAMALEFLHEHATPPVIHRDFKCS 286
+ L H++ D RT + + A +E+L H V+H+D
Sbjct: 101 EFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATR 157
Query: 287 NVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYG 346
NVL+ K++D GL + V ++ L ++APE GK + SD++SYG
Sbjct: 158 NVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYG 217
Query: 347 VVLLELLT 354
VVL E+ +
Sbjct: 218 VVLWEVFS 225
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 39/201 (19%)
Query: 179 TVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLV-------ELLGYCADQNHRLLISEY 231
T A+K L D +++ + DL+S + +++ LLG C +I EY
Sbjct: 50 TKVAVKMLKSDATEKDLS-----DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEY 104
Query: 232 MPNGTLQQHL---------HRHNNRYRP---LDWRTRLIIALDCAMALEFLHEHATPPVI 279
G L+++L + +N + P L + + A A +E+L A+ I
Sbjct: 105 ASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCI 161
Query: 280 HRDFKCSNVLLDQNFRAKVTDFGLAKMV------SDKINGQISTRVLGTTGYLAPEYAST 333
HRD NVL+ ++ K+ DFGLA+ + NG++ + ++APE
Sbjct: 162 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK------WMAPEALFD 215
Query: 334 GKLTTKSDVYSYGVVLLELLT 354
T +SDV+S+GV+L E+ T
Sbjct: 216 RIYTHQSDVWSFGVLLWEIFT 236
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 39/201 (19%)
Query: 179 TVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLV-------ELLGYCADQNHRLLISEY 231
T A+K L D +++ + DL+S + +++ LLG C +I EY
Sbjct: 102 TKVAVKMLKSDATEKDLS-----DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEY 156
Query: 232 MPNGTLQQHL---------HRHNNRYRP---LDWRTRLIIALDCAMALEFLHEHATPPVI 279
G L+++L + +N + P L + + A A +E+L A+ I
Sbjct: 157 ASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCI 213
Query: 280 HRDFKCSNVLLDQNFRAKVTDFGLAKMV------SDKINGQISTRVLGTTGYLAPEYAST 333
HRD NVL+ ++ K+ DFGLA+ + NG++ + ++APE
Sbjct: 214 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK------WMAPEALFD 267
Query: 334 GKLTTKSDVYSYGVVLLELLT 354
T +SDV+S+GV+L E+ T
Sbjct: 268 RIYTHQSDVWSFGVLLWEIFT 288
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRER-AFRMEVDLLSRLHS-PQLVELLGYCADQNHRLL 227
Y + SD + A+K L ER A E+ +LS L + +V LLG C L+
Sbjct: 68 YGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLV 127
Query: 228 ISEYMPNGTLQQHLHRHNNRYRPLDWRTRLI--------------IALDCAMALEFLHEH 273
I+EY G L L R + + ++ + A + FL
Sbjct: 128 ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL--- 184
Query: 274 ATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYAST 333
A+ IHRD N+LL K+ DFGLA+ + + N + ++APE
Sbjct: 185 ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFN 244
Query: 334 GKLTTKSDVYSYGVVLLELLT 354
T +SDV+SYG+ L EL +
Sbjct: 245 CVYTFESDVWSYGIFLWELFS 265
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 84/188 (44%), Gaps = 18/188 (9%)
Query: 181 AAIKKLH--RDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQ 238
AIK L +G RE FR E L +RL P +V LLG +I Y +G L
Sbjct: 59 VAIKTLKDKAEGPLREE-FRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLH 117
Query: 239 QHL---HRHNNRYRPLDWRT---------RLIIALDCAMALEFLHEHATPPVIHRDFKCS 286
+ L H++ D RT + + A +E+L H V+H+D
Sbjct: 118 EFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATR 174
Query: 287 NVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYG 346
NVL+ K++D GL + V ++ L ++APE GK + SD++SYG
Sbjct: 175 NVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYG 234
Query: 347 VVLLELLT 354
VVL E+ +
Sbjct: 235 VVLWEVFS 242
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 88/180 (48%), Gaps = 10/180 (5%)
Query: 181 AAIKKLHRDGK-QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
A+K +D + F E ++ L P +V+L+G ++ +I E P G L
Sbjct: 43 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGH 101
Query: 240 HLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVT 299
+L R+ N + L T ++ +L A+ +L + +HRD N+L+ K+
Sbjct: 102 YLERNKNSLKVL---TLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLG 155
Query: 300 DFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
DFGL++ + D+ + S L +++PE + + TT SDV+ + V + E+L+ G+ P
Sbjct: 156 DFGLSRYIEDEDYYKASVTRL-PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 11/167 (6%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT----LQQHLHRHNNRYRPLDWRT 255
E+ +S+ H P +V ++ L+ + + G+ ++ + + ++ LD T
Sbjct: 63 EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 122
Query: 256 RLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS---DKIN 312
I + LE+LH++ IHRD K N+LL ++ ++ DFG++ ++ D
Sbjct: 123 IATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR 179
Query: 313 GQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELLTGRVP 358
++ +GT ++APE + K+D++S+G+ +EL TG P
Sbjct: 180 NKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 88/180 (48%), Gaps = 10/180 (5%)
Query: 181 AAIKKLHRDGK-QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
A+K +D + F E ++ L P +V+L+G ++ +I E P G L
Sbjct: 39 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGH 97
Query: 240 HLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVT 299
+L R+ N + L T ++ +L A+ +L + +HRD N+L+ K+
Sbjct: 98 YLERNKNSLKVL---TLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLG 151
Query: 300 DFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
DFGL++ + D+ + S L +++PE + + TT SDV+ + V + E+L+ G+ P
Sbjct: 152 DFGLSRYIEDEDYYKASVTRL-PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 180 VAAIKKLHRDGKQ-RERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQ 238
+ AIK + ++ + +E + E+ +L ++ P +V L H LI + + G L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 239 QHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL---LDQNFR 295
+ Y D + LD A+++LH+ ++HRD K N+L LD++ +
Sbjct: 105 DRI-VEKGFYTERDASRLIFQVLD---AVKYLHDLG---IVHRDLKPENLLYYSLDEDSK 157
Query: 296 AKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTG 355
++DFGL+KM G + + GT GY+APE + + D +S GV+ LL G
Sbjct: 158 IMISDFGLSKMED---PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
Query: 356 RVP 358
P
Sbjct: 215 YPP 217
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 107/272 (39%), Gaps = 33/272 (12%)
Query: 181 AAIKKLHRDGKQRE-RAFRMEVDLLSRL-HSPQLVELLGYCADQNHRLL-ISEYMPNGTL 237
A+K L E RA E+ +L + H +V LLG C L+ I+E+ G L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 238 QQHLHRHNNRYRP------------LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKC 285
+L N + P L + + A +EFL A+ IHRD
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 167
Query: 286 SNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSY 345
N+LL + K+ DFGLA+ + + ++APE T +SDV+S+
Sbjct: 168 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 346 GVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXX 405
GV+L E+ + L + P + EE + + + P
Sbjct: 228 GVLLWEIFS---------------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY 272
Query: 406 XXXXVCVQPEAAYRPLMTDVVQSLIPVVKNNA 437
C E + RP +++V+ L +++ NA
Sbjct: 273 QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 88/180 (48%), Gaps = 10/180 (5%)
Query: 181 AAIKKLHRDGK-QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
A+K +D + F E ++ L P +V+L+G ++ +I E P G L
Sbjct: 55 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGH 113
Query: 240 HLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVT 299
+L R+ N + L T ++ +L A+ +L + +HRD N+L+ K+
Sbjct: 114 YLERNKNSLKVL---TLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLG 167
Query: 300 DFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
DFGL++ + D+ + S L +++PE + + TT SDV+ + V + E+L+ G+ P
Sbjct: 168 DFGLSRYIEDEDYYKASVTRL-PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 11/167 (6%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT----LQQHLHRHNNRYRPLDWRT 255
E+ +S+ H P +V ++ L+ + + G+ ++ + + ++ LD T
Sbjct: 58 EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 117
Query: 256 RLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS---DKIN 312
I + LE+LH++ IHRD K N+LL ++ ++ DFG++ ++ D
Sbjct: 118 IATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR 174
Query: 313 GQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELLTGRVP 358
++ +GT ++APE + K+D++S+G+ +EL TG P
Sbjct: 175 NKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 180 VAAIKKLHRDGKQ-RERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQ 238
+ AIK + ++ + +E + E+ +L ++ P +V L H LI + + G L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 239 QHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL---LDQNFR 295
+ Y D + LD A+++LH+ ++HRD K N+L LD++ +
Sbjct: 105 DRI-VEKGFYTERDASRLIFQVLD---AVKYLHDLG---IVHRDLKPENLLYYSLDEDSK 157
Query: 296 AKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTG 355
++DFGL+KM G + + GT GY+APE + + D +S GV+ LL G
Sbjct: 158 IMISDFGLSKMED---PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
Query: 356 RVP 358
P
Sbjct: 215 YPP 217
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 12/183 (6%)
Query: 179 TVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQ 238
V I K + ++ FR EV ++ L+ P +V+L + L+ EY G +
Sbjct: 43 AVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVF 101
Query: 239 QHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKV 298
+L H R + + R + A+++ H+ ++HRD K N+LLD + K+
Sbjct: 102 DYLVAHG-RMKEKEARAKF---RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKI 154
Query: 299 TDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTT-KSDVYSYGVVLLELLTGRV 357
DFG + ++ G G Y APE K + DV+S GV+L L++G +
Sbjct: 155 ADFGFS---NEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 358 PVD 360
P D
Sbjct: 212 PFD 214
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRER-AFRMEVDLLSRLHS-PQLVELLGYCADQNHRLL 227
Y + SD + A+K L ER A E+ +LS L + +V LLG C L+
Sbjct: 61 YGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLV 120
Query: 228 ISEYMPNGTLQQHLHRHNNRYRPLDWRTRLI--------------IALDCAMALEFLHEH 273
I+EY G L L R + + ++ + A + FL
Sbjct: 121 ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL--- 177
Query: 274 ATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYAST 333
A+ IHRD N+LL K+ DFGLA+ + + N + ++APE
Sbjct: 178 ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN 237
Query: 334 GKLTTKSDVYSYGVVLLELLT 354
T +SDV+SYG+ L EL +
Sbjct: 238 CVYTFESDVWSYGIFLWELFS 258
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 15/183 (8%)
Query: 179 TVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQ 238
+ I K +GK E + E+ +L ++ P +V L H LI + + G L
Sbjct: 47 AIKCIAKKALEGK--EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 239 QHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL---LDQNFR 295
+ Y D + LD A+++LH+ ++HRD K N+L LD++ +
Sbjct: 105 DRI-VEKGFYTERDASRLIFQVLD---AVKYLHDLG---IVHRDLKPENLLYYSLDEDSK 157
Query: 296 AKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTG 355
++DFGL+KM G + + GT GY+APE + + D +S GV+ LL G
Sbjct: 158 IMISDFGLSKMED---PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
Query: 356 RVP 358
P
Sbjct: 215 YPP 217
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRER-AFRMEVDLLSRLHS-PQLVELLGYCADQNHRLL 227
Y + SD + A+K L ER A E+ +LS L + +V LLG C L+
Sbjct: 68 YGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLV 127
Query: 228 ISEYMPNGTLQQHLHRHNNRYRPLDWRTRLI--------------IALDCAMALEFLHEH 273
I+EY G L L R + + ++ + A + FL
Sbjct: 128 ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL--- 184
Query: 274 ATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYAST 333
A+ IHRD N+LL K+ DFGLA+ + + N + ++APE
Sbjct: 185 ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN 244
Query: 334 GKLTTKSDVYSYGVVLLELLT 354
T +SDV+SYG+ L EL +
Sbjct: 245 CVYTFESDVWSYGIFLWELFS 265
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRER-AFRMEVDLLSRLHS-PQLVELLGYCADQNHRLL 227
Y + SD + A+K L ER A E+ +LS L + +V LLG C L+
Sbjct: 63 YGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLV 122
Query: 228 ISEYMPNGTLQQHLHRHNNRYRPLDWRTRLI--------------IALDCAMALEFLHEH 273
I+EY G L L R + + ++ + A + FL
Sbjct: 123 ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL--- 179
Query: 274 ATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYAST 333
A+ IHRD N+LL K+ DFGLA+ + + N + ++APE
Sbjct: 180 ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN 239
Query: 334 GKLTTKSDVYSYGVVLLELLT 354
T +SDV+SYG+ L EL +
Sbjct: 240 CVYTFESDVWSYGIFLWELFS 260
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 171 YKGVLSDGTV-AAIKKLHRDGKQRER-AFRMEVDLLSRLHS-PQLVELLGYCADQNHRLL 227
Y + SD + A+K L ER A E+ +LS L + +V LLG C L+
Sbjct: 45 YGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLV 104
Query: 228 ISEYMPNGTLQQHLHRHNNRYRPLDWRTRLI--------------IALDCAMALEFLHEH 273
I+EY G L L R + + ++ + A + FL
Sbjct: 105 ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL--- 161
Query: 274 ATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYAST 333
A+ IHRD N+LL K+ DFGLA+ + + N + ++APE
Sbjct: 162 ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN 221
Query: 334 GKLTTKSDVYSYGVVLLELLT 354
T +SDV+SYG+ L EL +
Sbjct: 222 CVYTFESDVWSYGIFLWELFS 242
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 180 VAAIKKLHRDGKQ-RERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQ 238
+ AIK + ++ + +E + E+ +L ++ P +V L H LI + + G L
Sbjct: 45 LVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 239 QHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL---LDQNFR 295
+ Y D + LD A+++LH+ ++HRD K N+L LD++ +
Sbjct: 105 DRI-VEKGFYTERDASRLIFQVLD---AVKYLHDLG---IVHRDLKPENLLYYSLDEDSK 157
Query: 296 AKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTG 355
++DFGL+KM G + + GT GY+APE + + D +S GV+ LL G
Sbjct: 158 IMISDFGLSKMED---PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
Query: 356 RVP 358
P
Sbjct: 215 YPP 217
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 179 TVAAIKKLHRDGKQRE-RAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTL 237
T A+K L + E R E ++L +++ P +++L G C+ LLI EY G+L
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 238 QQHLHRHNNRYRP---------------------LDWRTRLIIALDCAMALEFLHEHATP 276
+ L R + + P L + A + +++L E
Sbjct: 114 RGFL-RESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK-- 170
Query: 277 PVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
++HRD N+L+ + + K++DFGL++ V ++ + ++ ++A E
Sbjct: 171 -LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIY 229
Query: 337 TTKSDVYSYGVVLLELLT-GRVPVDPNRPP 365
TT+SDV+S+GV+L E++T G P P PP
Sbjct: 230 TTQSDVWSFGVLLWEIVTLGGNPY-PGIPP 258
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 81/165 (49%), Gaps = 13/165 (7%)
Query: 198 RMEVDLLSRLHSPQLVELLGYCADQNHRL-LISEYMPNGTLQQHLHRHNNRYRPLDWRTR 256
R E +L + + L Y +L LI +Y+ G L HL + R R + +
Sbjct: 106 RTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL---SQRERFTEHEVQ 162
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAK-MVSDKINGQI 315
+ + + +ALE LH+ +I+RD K N+LLD N +TDFGL+K V+D+ +
Sbjct: 163 IYVG-EIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET--ER 216
Query: 316 STRVLGTTGYLAPEYASTGKL--TTKSDVYSYGVVLLELLTGRVP 358
+ GT Y+AP+ G D +S GV++ ELLTG P
Sbjct: 217 AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 106/271 (39%), Gaps = 32/271 (11%)
Query: 181 AAIKKLHRDGKQRE-RAFRMEVDLLSRL-HSPQLVELLGYCADQNHRLL-ISEYMPNGTL 237
A+K L E RA E+ +L + H +V LLG C L+ I E+ G L
Sbjct: 61 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 120
Query: 238 QQHLHRHNNRYRP-----------LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCS 286
+L N + P L + + A +EFL A+ IHRD
Sbjct: 121 STYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAAR 177
Query: 287 NVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYG 346
N+LL + K+ DFGLA+ + + ++APE T +SDV+S+G
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 237
Query: 347 VVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXXX 406
V+L E+ + L + P + EE + + + P
Sbjct: 238 VLLWEIFS---------------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ 282
Query: 407 XXXVCVQPEAAYRPLMTDVVQSLIPVVKNNA 437
C E + RP +++V+ L +++ NA
Sbjct: 283 TMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 39/201 (19%)
Query: 179 TVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLV-------ELLGYCADQNHRLLISEY 231
T A+K L D +++ + DL+S + +++ LLG C +I EY
Sbjct: 46 TKVAVKMLKSDATEKDLS-----DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEY 100
Query: 232 MPNGTLQQHLHR---------HNNRYRP---LDWRTRLIIALDCAMALEFLHEHATPPVI 279
G L+++L +N + P L + + A A +E+L A+ I
Sbjct: 101 ASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCI 157
Query: 280 HRDFKCSNVLLDQNFRAKVTDFGLAKMV------SDKINGQISTRVLGTTGYLAPEYAST 333
HRD NVL+ ++ K+ DFGLA+ + NG++ + ++APE
Sbjct: 158 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK------WMAPEALFD 211
Query: 334 GKLTTKSDVYSYGVVLLELLT 354
T +SDV+S+GV+L E+ T
Sbjct: 212 RIYTHQSDVWSFGVLLWEIFT 232
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 79/184 (42%), Gaps = 14/184 (7%)
Query: 180 VAAIKKLHRDGKQRE---RAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT 236
+ A+K L + ++E R E+++ + LH P ++ L Y D+ LI EY P G
Sbjct: 50 IVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGE 109
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
L + L + D + I + A AL + H VIHRD K N+LL
Sbjct: 110 LYKELQKSCT----FDEQRTATIMEELADALMYCHGKK---VIHRDIKPENLLLGLKGEL 162
Query: 297 KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGR 356
K+ DFG + + GT YL PE K D++ GV+ ELL G
Sbjct: 163 KIADFGWSVHAPSLRRKTMC----GTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGN 218
Query: 357 VPVD 360
P +
Sbjct: 219 PPFE 222
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 39/201 (19%)
Query: 179 TVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLV-------ELLGYCADQNHRLLISEY 231
T A+K L D +++ + DL+S + +++ LLG C +I EY
Sbjct: 61 TKVAVKMLKSDATEKDLS-----DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEY 115
Query: 232 MPNGTLQQHL---------HRHNNRYRP---LDWRTRLIIALDCAMALEFLHEHATPPVI 279
G L+++L + +N + P L + + A A +E+L A+ I
Sbjct: 116 ASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCI 172
Query: 280 HRDFKCSNVLLDQNFRAKVTDFGLAKMV------SDKINGQISTRVLGTTGYLAPEYAST 333
HRD NVL+ ++ K+ DFGLA+ + NG++ + ++APE
Sbjct: 173 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVK------WMAPEALFD 226
Query: 334 GKLTTKSDVYSYGVVLLELLT 354
T +SDV+S+GV+L E+ T
Sbjct: 227 RIYTHQSDVWSFGVLLWEIFT 247
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 193 RERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLD 252
RE+ F E + + P +V+L+G +N +I E G L+ L R LD
Sbjct: 55 REK-FLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQ---VRKFSLD 109
Query: 253 WRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN 312
+ ++ A + AL +L +HRD NVL+ N K+ DFGL++ + D
Sbjct: 110 LASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTX 166
Query: 313 GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT------------------ 354
+ S L ++APE + + T+ SDV+ +GV + E+L
Sbjct: 167 XKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 355 ---GRVPVDPNRPPGEHVLVS--WAL-----PRLT 379
R+P+ PN PP + L++ WA PR T
Sbjct: 226 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 260
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 107/272 (39%), Gaps = 33/272 (12%)
Query: 181 AAIKKLHRDGKQRE-RAFRMEVDLLSRL-HSPQLVELLGYCADQNHRLL-ISEYMPNGTL 237
A+K L E RA E+ +L + H +V LLG C L+ I+E+ G L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 238 QQHLHRHNNRYRP------------LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKC 285
+L N + P L + + A +EFL A+ IHRD
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 167
Query: 286 SNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSY 345
N+LL + K+ DFGLA+ + + ++APE T +SDV+S+
Sbjct: 168 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 346 GVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXX 405
GV+L E+ + L + P + EE + + + P
Sbjct: 228 GVLLWEIFS---------------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY 272
Query: 406 XXXXVCVQPEAAYRPLMTDVVQSLIPVVKNNA 437
C E + RP +++V+ L +++ NA
Sbjct: 273 QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 10/169 (5%)
Query: 192 QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPL 251
Q+E+ E+ + L +P +V G+ D + ++ E +L L H R
Sbjct: 85 QKEK-MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL---LELHKRRKAVT 140
Query: 252 DWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKI 311
+ R + +++LH + VIHRD K N+ L+ + K+ DFGLA + +
Sbjct: 141 EPEARYFMR-QTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EF 194
Query: 312 NGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVD 360
+G+ + GT Y+APE + + D++S G +L LL G+ P +
Sbjct: 195 DGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 107/270 (39%), Gaps = 31/270 (11%)
Query: 181 AAIKKLHRDGKQRE-RAFRMEVDLLSRL-HSPQLVELLGYCADQNHRLL-ISEYMPNGTL 237
A+K L E RA E+ +L + H +V LLG C L+ I E+ G L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 238 QQHLHRHNNR---YRPLDWRTRLII-------ALDCAMALEFLHEHATPPVIHRDFKCSN 287
+L N Y+P D + + A +EFL A+ IHRD N
Sbjct: 122 STYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARN 178
Query: 288 VLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGV 347
+LL + K+ DFGLA+ + + ++APE T +SDV+S+GV
Sbjct: 179 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 348 VLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXXXX 407
+L E+ + L + P + EE + + + P
Sbjct: 239 LLWEIFS---------------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 283
Query: 408 XXVCVQPEAAYRPLMTDVVQSLIPVVKNNA 437
C E + RP +++V+ L +++ NA
Sbjct: 284 MLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 180 VAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
V I K + ++ FR EV ++ L+ P +V+L + L+ EY G +
Sbjct: 37 VKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFD 95
Query: 240 HLHRHN-NRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKV 298
+L H + + + R I++ A+++ H+ ++HRD K N+LLD + K+
Sbjct: 96 YLVAHGWMKEKEARAKFRQIVS-----AVQYCHQKF---IVHRDLKAENLLLDADMNIKI 147
Query: 299 TDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTT-KSDVYSYGVVLLELLTGRV 357
DFG + + ++ T G+ Y APE K + DV+S GV+L L++G +
Sbjct: 148 ADFGFSNEFT--FGNKLDT-FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 204
Query: 358 PVD 360
P D
Sbjct: 205 PFD 207
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 106/268 (39%), Gaps = 29/268 (10%)
Query: 181 AAIKKLHRDGKQRE-RAFRMEVDLLSRL-HSPQLVELLGYCADQNHRLL-ISEYMPNGTL 237
A+K L E RA E+ +L + H +V LLG C L+ I E+ G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 238 QQHLHRHNNRYRP--------LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
+L N + P L + + A +EFL A+ IHRD N+L
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNIL 176
Query: 290 LDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVL 349
L + K+ DFGLA+ + + ++APE T +SDV+S+GV+L
Sbjct: 177 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 236
Query: 350 LELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXX 409
E+ + L + P + EE + + + P
Sbjct: 237 WEIFS---------------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML 281
Query: 410 VCVQPEAAYRPLMTDVVQSLIPVVKNNA 437
C E + RP +++V+ L +++ NA
Sbjct: 282 DCWHGEPSQRPTFSELVEHLGNLLQANA 309
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 107/272 (39%), Gaps = 33/272 (12%)
Query: 181 AAIKKLHRDGKQRE-RAFRMEVDLLSRL-HSPQLVELLGYCADQNHRLL-ISEYMPNGTL 237
A+K L E RA E+ +L + H +V LLG C L+ I+E+ G L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 238 QQHLHRHNNRYRP------------LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKC 285
+L N + P L + + A +EFL A+ IHRD
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 167
Query: 286 SNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSY 345
N+LL + K+ DFGLA+ + + ++APE T +SDV+S+
Sbjct: 168 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 346 GVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXX 405
GV+L E+ + L + P + EE + + + P
Sbjct: 228 GVLLWEIFS---------------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY 272
Query: 406 XXXXVCVQPEAAYRPLMTDVVQSLIPVVKNNA 437
C E + RP +++V+ L +++ NA
Sbjct: 273 QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 179 TVAAIKKLHRDGKQRE-RAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTL 237
T A+K L + E R E ++L +++ P +++L G C+ LLI EY G+L
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 238 QQHLHRHNNRYRP---------------------LDWRTRLIIALDCAMALEFLHEHATP 276
+ L R + + P L + A + +++L E
Sbjct: 114 RGFL-RESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK-- 170
Query: 277 PVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
++HRD N+L+ + + K++DFGL++ V ++ + ++ ++A E
Sbjct: 171 -LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIY 229
Query: 337 TTKSDVYSYGVVLLELLT-GRVPVDPNRPP 365
TT+SDV+S+GV+L E++T G P P PP
Sbjct: 230 TTQSDVWSFGVLLWEIVTLGGNPY-PGIPP 258
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 11/162 (6%)
Query: 198 RMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRL 257
+ E ++L + P +V+L+ LI EY+ G L L R T
Sbjct: 69 KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMED----TAC 124
Query: 258 IIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKI-NGQIS 316
+ +MAL LH+ +I+RD K N++L+ K+TDFGL K + I +G ++
Sbjct: 125 FYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK---ESIHDGTVT 178
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
GT Y+APE D +S G ++ ++LTG P
Sbjct: 179 HXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 10/169 (5%)
Query: 192 QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPL 251
Q+E+ E+ + L +P +V G+ D + ++ E +L L H R
Sbjct: 85 QKEK-MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL---LELHKRRKAVT 140
Query: 252 DWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKI 311
+ R + +++LH + VIHRD K N+ L+ + K+ DFGLA + +
Sbjct: 141 EPEARYFMR-QTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EF 194
Query: 312 NGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVD 360
+G+ + GT Y+APE + + D++S G +L LL G+ P +
Sbjct: 195 DGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 106/272 (38%), Gaps = 33/272 (12%)
Query: 181 AAIKKLHRDGKQRE-RAFRMEVDLLSRL-HSPQLVELLGYCADQNHRLL-ISEYMPNGTL 237
A+K L E RA E+ +L + H +V LLG C L+ I E+ G L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 110
Query: 238 QQHLHRHNNRYRP------------LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKC 285
+L N + P L + + A +EFL A+ IHRD
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 167
Query: 286 SNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSY 345
N+LL + K+ DFGLA+ + + ++APE T +SDV+S+
Sbjct: 168 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 346 GVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXX 405
GV+L E+ + L + P + EE + + + P
Sbjct: 228 GVLLWEIFS---------------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY 272
Query: 406 XXXXVCVQPEAAYRPLMTDVVQSLIPVVKNNA 437
C E + RP +++V+ L +++ NA
Sbjct: 273 QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 10/169 (5%)
Query: 192 QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPL 251
Q+E+ E+ + L +P +V G+ D + ++ E +L L H R
Sbjct: 85 QKEK-MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL---LELHKRRKAVT 140
Query: 252 DWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKI 311
+ R + +++LH + VIHRD K N+ L+ + K+ DFGLA + +
Sbjct: 141 EPEARYFMR-QTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EF 194
Query: 312 NGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVD 360
+G+ + GT Y+APE + + D++S G +L LL G+ P +
Sbjct: 195 DGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 37/215 (17%)
Query: 193 RERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLD 252
RE+ F E + + P +V+L+G +N +I E G L+ L R LD
Sbjct: 435 REK-FLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQV---RKFSLD 489
Query: 253 WRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN 312
+ ++ A + AL +L + +HRD NVL+ N K+ DFGL++ + D
Sbjct: 490 LASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 546
Query: 313 GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT------------------ 354
+ S L ++APE + + T+ SDV+ +GV + E+L
Sbjct: 547 YKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
Query: 355 ---GRVPVDPNRPPGEHVLVS--WAL-----PRLT 379
R+P+ PN PP + L++ WA PR T
Sbjct: 606 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 640
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 14/185 (7%)
Query: 178 GTVAAIKKLHRDG-KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT 236
G + A+K + + K +E + E+ +L ++ +V L NH L+ + + G
Sbjct: 47 GKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGE 106
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQN 293
L + Y D T + LD A+ +LH ++HRD K N+L D+
Sbjct: 107 LFDRI-VEKGFYTEKDASTLIRQVLD---AVYYLHRMG---IVHRDLKPENLLYYSQDEE 159
Query: 294 FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELL 353
+ ++DFGL+KM G + + GT GY+APE + + D +S GV+ LL
Sbjct: 160 SKIMISDFGLSKMEG---KGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 216
Query: 354 TGRVP 358
G P
Sbjct: 217 CGYPP 221
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 193 RERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLD 252
RE+ F E + + P +V+L+G + N +I E G L+ L R LD
Sbjct: 83 REK-FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQ---VRKYSLD 137
Query: 253 WRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN 312
+ ++ A + AL +L +HRD NVL+ N K+ DFGL++ + D
Sbjct: 138 LASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 194
Query: 313 GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT------------------ 354
+ S L ++APE + + T+ SDV+ +GV + E+L
Sbjct: 195 YKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 253
Query: 355 ---GRVPVDPNRPPGEHVLVS--WAL-----PRLT 379
R+P+ PN PP + L++ WA PR T
Sbjct: 254 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 288
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 11/162 (6%)
Query: 198 RMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRL 257
+ E ++L + P +V+L+ LI EY+ G L L R T
Sbjct: 69 KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMED----TAC 124
Query: 258 IIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKI-NGQIS 316
+ +MAL LH+ +I+RD K N++L+ K+TDFGL K + I +G ++
Sbjct: 125 FYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK---ESIHDGTVT 178
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
GT Y+APE D +S G ++ ++LTG P
Sbjct: 179 HTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 89/201 (44%), Gaps = 39/201 (19%)
Query: 179 TVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLV-------ELLGYCADQNHRLLISEY 231
T A+K L D +++ + DL+S + +++ LLG C +I EY
Sbjct: 61 TKVAVKMLKSDATEKDLS-----DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEY 115
Query: 232 MPNGTLQQHLHRH------------NNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVI 279
G L+++L +N L + + A A +E+L A+ I
Sbjct: 116 ASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCI 172
Query: 280 HRDFKCSNVLLDQNFRAKVTDFGLAKMV------SDKINGQISTRVLGTTGYLAPEYAST 333
HRD NVL+ ++ K+ DFGLA+ + NG++ + ++APE
Sbjct: 173 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVK------WMAPEALFD 226
Query: 334 GKLTTKSDVYSYGVVLLELLT 354
T +SDV+S+GV+L E+ T
Sbjct: 227 RIYTHQSDVWSFGVLLWEIFT 247
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 67/139 (48%), Gaps = 23/139 (16%)
Query: 230 EYMPNGTLQQHLHRHN-NRYRPLDWRT-RLIIALDCAMALEFLHEHATPPVIHRDFKCSN 287
EY NGTL +H N N+ R WR R I+ AL ++H +IHRD K N
Sbjct: 95 EYCENGTLYDLIHSENLNQQRDEYWRLFRQILE-----ALSYIHSQG---IIHRDLKPMN 146
Query: 288 VLLDQNFRAKVTDFGLAKMV----------SDKINGQIS--TRVLGTTGYLAPEYA-STG 334
+ +D++ K+ DFGLAK V S + G T +GT Y+A E TG
Sbjct: 147 IFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTG 206
Query: 335 KLTTKSDVYSYGVVLLELL 353
K D+YS G++ E++
Sbjct: 207 HYNEKIDMYSLGIIFFEMI 225
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 193 RERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLD 252
RE+ F E + + P +V+L+G +N +I E G L+ L R LD
Sbjct: 60 REK-FLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQ---VRKYSLD 114
Query: 253 WRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN 312
+ ++ A + AL +L +HRD NVL+ N K+ DFGL++ + D
Sbjct: 115 LASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 171
Query: 313 GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT------------------ 354
+ S L ++APE + + T+ SDV+ +GV + E+L
Sbjct: 172 YKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 230
Query: 355 ---GRVPVDPNRPPGEHVLVS--WAL-----PRLT 379
R+P+ PN PP + L++ WA PR T
Sbjct: 231 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 265
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 27/198 (13%)
Query: 176 SDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLV-------ELLGYCADQNHRLLI 228
+ A+K L D +++ + DL+S + +++ LLG C +I
Sbjct: 65 KEAVTVAVKMLKDDATEKDLS-----DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 119
Query: 229 SEYMPNGTLQQHLHRHN----------NRY--RPLDWRTRLIIALDCAMALEFLHEHATP 276
EY G L+++L NR + ++ + A +E+L A+
Sbjct: 120 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQ 176
Query: 277 PVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
IHRD NVL+ +N K+ DFGLA+ +++ + +T ++APE
Sbjct: 177 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVY 236
Query: 337 TTKSDVYSYGVVLLELLT 354
T +SDV+S+GV++ E+ T
Sbjct: 237 THQSDVWSFGVLMWEIFT 254
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 106/272 (38%), Gaps = 33/272 (12%)
Query: 181 AAIKKLHRDGKQRE-RAFRMEVDLLSRL-HSPQLVELLGYCADQNHRLL-ISEYMPNGTL 237
A+K L E RA E+ +L + H +V LLG C L+ I E+ G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 238 QQHLHRHNNRYRP------------LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKC 285
+L N + P L + + A +EFL A+ IHRD
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 286 SNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSY 345
N+LL + K+ DFGLA+ + + ++APE T +SDV+S+
Sbjct: 177 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 346 GVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXX 405
GV+L E+ + L + P + EE + + + P
Sbjct: 237 GVLLWEIFS---------------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY 281
Query: 406 XXXXVCVQPEAAYRPLMTDVVQSLIPVVKNNA 437
C E + RP +++V+ L +++ NA
Sbjct: 282 QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 37/215 (17%)
Query: 193 RERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLD 252
RE+ F E + + P +V+L+G + N +I E G L+ L R LD
Sbjct: 58 REK-FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQ---VRKYSLD 112
Query: 253 WRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN 312
+ ++ A + AL +L + +HRD NVL+ N K+ DFGL++ + D
Sbjct: 113 LASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 169
Query: 313 GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT------------------ 354
+ S L ++APE + + T+ SDV+ +GV + E+L
Sbjct: 170 YKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 228
Query: 355 ---GRVPVDPNRPPGEHVLVS--WAL-----PRLT 379
R+P+ PN PP + L++ WA PR T
Sbjct: 229 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 263
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 27/198 (13%)
Query: 176 SDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLV-------ELLGYCADQNHRLLI 228
+ A+K L D +++ + DL+S + +++ LLG C +I
Sbjct: 65 KEAVTVAVKMLKDDATEKDLS-----DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 119
Query: 229 SEYMPNGTLQQHLHRHN----------NRY--RPLDWRTRLIIALDCAMALEFLHEHATP 276
EY G L+++L NR + ++ + A +E+L A+
Sbjct: 120 VEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQ 176
Query: 277 PVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
IHRD NVL+ +N K+ DFGLA+ +++ + +T ++APE
Sbjct: 177 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVY 236
Query: 337 TTKSDVYSYGVVLLELLT 354
T +SDV+S+GV++ E+ T
Sbjct: 237 THQSDVWSFGVLMWEIFT 254
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
EV +L L P +++L + D+ + L+ E G L + H ++ +D +I
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEII-HRMKFNEVD---AAVI 141
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR---AKVTDFGLAKMVSDKINGQIS 316
+ +LH+H ++HRD K N+LL+ + K+ DFGL+ + N +
Sbjct: 142 IKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE---NQKKM 195
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
LGT Y+APE K K DV+S GV+L LL G P
Sbjct: 196 KERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPP 236
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 14/177 (7%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
+Q E F ME ++S+L+ +V +G R ++ E M G L+ L R RP
Sbjct: 89 EQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE--TRPRP 146
Query: 251 -----LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQNFRAKVTDFG 302
L L +A D A ++L E+ IHRD N LL AK+ DFG
Sbjct: 147 SQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG 203
Query: 303 LAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
+A+ + + + ++ PE G T+K+D +S+GV+L E+ + G +P
Sbjct: 204 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 260
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 37/215 (17%)
Query: 193 RERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLD 252
RE+ F E + + P +V+L+G + N +I E G L+ L R LD
Sbjct: 57 REK-FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQ---VRKYSLD 111
Query: 253 WRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN 312
+ ++ A + AL +L + +HRD NVL+ N K+ DFGL++ + D
Sbjct: 112 LASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 168
Query: 313 GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT------------------ 354
+ S L ++APE + + T+ SDV+ +GV + E+L
Sbjct: 169 YKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 227
Query: 355 ---GRVPVDPNRPPGEHVLVS--WAL-----PRLT 379
R+P+ PN PP + L++ WA PR T
Sbjct: 228 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 262
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 14/177 (7%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
+Q E F ME ++S+L+ +V +G R ++ E M G L+ L R RP
Sbjct: 75 EQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRP 132
Query: 251 -----LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQNFRAKVTDFG 302
L L +A D A ++L E+ IHRD N LL AK+ DFG
Sbjct: 133 SQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG 189
Query: 303 LAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
+A+ + + + ++ PE G T+K+D +S+GV+L E+ + G +P
Sbjct: 190 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 246
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 193 RERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLD 252
RE+ F E + + P +V+L+G + N +I E G L+ L R LD
Sbjct: 52 REK-FLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQ---VRKYSLD 106
Query: 253 WRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN 312
+ ++ A + AL +L +HRD NVL+ N K+ DFGL++ + D
Sbjct: 107 LASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 163
Query: 313 GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT------------------ 354
+ S L ++APE + + T+ SDV+ +GV + E+L
Sbjct: 164 YKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 222
Query: 355 ---GRVPVDPNRPPGEHVLVS--WAL-----PRLT 379
R+P+ PN PP + L++ WA PR T
Sbjct: 223 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 257
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 193 RERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLD 252
RE+ F E + + P +V+L+G +N +I E G L+ L R LD
Sbjct: 55 REK-FLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQ---VRKYSLD 109
Query: 253 WRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN 312
+ ++ A + AL +L +HRD NVL+ N K+ DFGL++ + D
Sbjct: 110 LASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 166
Query: 313 GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT------------------ 354
+ S L ++APE + + T+ SDV+ +GV + E+L
Sbjct: 167 YKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 355 ---GRVPVDPNRPPGEHVLVS--WAL-----PRLT 379
R+P+ PN PP + L++ WA PR T
Sbjct: 226 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 260
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 106/268 (39%), Gaps = 29/268 (10%)
Query: 181 AAIKKLHRDGKQRE-RAFRMEVDLLSRL-HSPQLVELLGYCADQNHRLL-ISEYMPNGTL 237
A+K L E RA E+ +L + H +V LLG C L+ I E+ G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 238 QQHLHRHNNRYRP--------LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
+L N + P L + + A +EFL A+ IHRD N+L
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNIL 176
Query: 290 LDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVL 349
L + K+ DFGLA+ + + ++APE T +SDV+S+GV+L
Sbjct: 177 LSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 236
Query: 350 LELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXX 409
E+ + L + P + EE + + + P
Sbjct: 237 WEIFS---------------LGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTML 281
Query: 410 VCVQPEAAYRPLMTDVVQSLIPVVKNNA 437
C E + RP +++V+ L +++ NA
Sbjct: 282 DCWHGEPSQRPTFSELVEHLGNLLQANA 309
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 171 YKGV-LSDGTVAAIKKLHRDGKQR--ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLL 227
YKG+ + G A+K++ D ++ A R E+ L+ L +V L +N L
Sbjct: 22 YKGLNKTTGVYVALKEVKLDSEEGTPSTAIR-EISLMKELKHENIVRLYDVIHTENKLTL 80
Query: 228 ISEYMPNGTLQQHLHRH--NNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKC 285
+ E+M N L++++ N R L+ L F HE+ ++HRD K
Sbjct: 81 VFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKP 136
Query: 286 SNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYS 344
N+L+++ + K+ DFGLA+ +N S+ V+ T Y AP+ + +T D++S
Sbjct: 137 QNLLINKRGQLKLGDFGLARAFGIPVN-TFSSEVV-TLWYRAPDVLMGSRTYSTSIDIWS 194
Query: 345 YGVVLLELLTGRVPVDP 361
G +L E++TG+ P+ P
Sbjct: 195 CGCILAEMITGK-PLFP 210
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 179 TVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQ 238
+AA K + ++ + +E+D+L+ P +V+LL +N+ ++ E+ G +
Sbjct: 63 VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD 122
Query: 239 QHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKV 298
+ RPL ++ AL +LH++ +IHRD K N+L + K+
Sbjct: 123 AVMLELE---RPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKL 176
Query: 299 TDFGLAKMVSDKINGQISTR--VLGTTGYLAPE--YASTGK---LTTKSDVYSYGVVLLE 351
DFG VS K I R +GT ++APE T K K+DV+S G+ L+E
Sbjct: 177 ADFG----VSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIE 232
Query: 352 L 352
+
Sbjct: 233 M 233
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 10/169 (5%)
Query: 192 QRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPL 251
Q+E+ E+ + L +P +V G+ D + ++ E +L L H R
Sbjct: 69 QKEK-MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL---LELHKRRKAVT 124
Query: 252 DWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKI 311
+ R + +++LH + VIHRD K N+ L+ + K+ DFGLA + +
Sbjct: 125 EPEARYFMR-QTIQGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI--EF 178
Query: 312 NGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVD 360
+G+ + GT Y+APE + + D++S G +L LL G+ P +
Sbjct: 179 DGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 193 RERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLD 252
RE+ F E + + P +V+L+G +N +I E G L+ L R LD
Sbjct: 55 REK-FLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQ---VRKYSLD 109
Query: 253 WRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN 312
+ ++ A + AL +L +HRD NVL+ N K+ DFGL++ + D
Sbjct: 110 LASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 166
Query: 313 GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT------------------ 354
+ S L ++APE + + T+ SDV+ +GV + E+L
Sbjct: 167 YKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 355 ---GRVPVDPNRPPGEHVLVS--WAL-----PRLT 379
R+P+ PN PP + L++ WA PR T
Sbjct: 226 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 260
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 106/272 (38%), Gaps = 33/272 (12%)
Query: 181 AAIKKLHRDGKQRE-RAFRMEVDLLSRL-HSPQLVELLGYCADQNHRLL-ISEYMPNGTL 237
A+K L E RA E+ +L + H +V LLG C L+ I E+ G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 238 QQHLHRHNNRYRP------------LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKC 285
+L N + P L + + A +EFL A+ IHRD
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 286 SNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSY 345
N+LL + K+ DFGLA+ + + ++APE T +SDV+S+
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 346 GVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXX 405
GV+L E+ + L + P + EE + + + P
Sbjct: 237 GVLLWEIFS---------------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY 281
Query: 406 XXXXVCVQPEAAYRPLMTDVVQSLIPVVKNNA 437
C E + RP +++V+ L +++ NA
Sbjct: 282 QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 86/179 (48%), Gaps = 13/179 (7%)
Query: 179 TVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQ 238
+AA K + ++ + +E+D+L+ P +V+LL +N+ ++ E+ G +
Sbjct: 63 VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD 122
Query: 239 QHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKV 298
+ RPL ++ AL +LH++ +IHRD K N+L + K+
Sbjct: 123 AVMLELE---RPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKL 176
Query: 299 TDFGLAKMVSDKINGQISTRVLGTTGYLAPE--YASTGK---LTTKSDVYSYGVVLLEL 352
DFG++ + I + S +GT ++APE T K K+DV+S G+ L+E+
Sbjct: 177 ADFGVSAKNTRTIQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 12/183 (6%)
Query: 179 TVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQ 238
V I K + ++ FR EV + L+ P +V+L + L+ EY G +
Sbjct: 43 AVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVF 101
Query: 239 QHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKV 298
+L H R + + R + A+++ H+ ++HRD K N+LLD + K+
Sbjct: 102 DYLVAHG-RXKEKEARAKF---RQIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKI 154
Query: 299 TDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTT-KSDVYSYGVVLLELLTGRV 357
DFG + + G G Y APE K + DV+S GV+L L++G +
Sbjct: 155 ADFGFSNEFT---FGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 358 PVD 360
P D
Sbjct: 212 PFD 214
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 85/179 (47%), Gaps = 13/179 (7%)
Query: 179 TVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQ 238
+AA K + ++ + +E+D+L+ P +V+LL +N+ ++ E+ G +
Sbjct: 63 VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVD 122
Query: 239 QHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKV 298
+ RPL ++ AL +LH++ +IHRD K N+L + K+
Sbjct: 123 AVMLELE---RPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKL 176
Query: 299 TDFGLAKMVSDKINGQISTRVLGTTGYLAPE--YASTGK---LTTKSDVYSYGVVLLEL 352
DFG++ + I Q +GT ++APE T K K+DV+S G+ L+E+
Sbjct: 177 ADFGVSAKNTRXI--QRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 19/186 (10%)
Query: 180 VAAIKKLHRDGKQRERAFR---MEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT 236
V AIKK+ GKQ ++ EV L +L P ++ G ++ L+ EY G+
Sbjct: 81 VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GS 139
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
L H +PL + L +LH H +IHRD K N+LL +
Sbjct: 140 ASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLV 193
Query: 297 KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEY---ASTGKLTTKSDVYSYGVVLLELL 353
K+ DFG A +++ + +GT ++APE G+ K DV+S G+ +EL
Sbjct: 194 KLGDFGSASIMAP------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 247
Query: 354 TGRVPV 359
+ P+
Sbjct: 248 ERKPPL 253
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 22/226 (9%)
Query: 171 YKGV-LSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRL-HSPQLVELLGYCADQN----- 223
YKG + G +AAIK + G + E + E+++L + H + G +N
Sbjct: 41 YKGRHVKTGQLAAIKVMDVTGDEEEE-IKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 99
Query: 224 -HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRD 282
L+ E+ G++ + +W I + L LH+H VIHRD
Sbjct: 100 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIA--YICREILRGLSHLHQHK---VIHRD 154
Query: 283 FKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-----LT 337
K NVLL +N K+ DFG++ + D+ G+ +T +GT ++APE + +
Sbjct: 155 IKGQNVLLTENAEVKLVDFGVSAQL-DRTVGRRNT-FIGTPYWMAPEVIACDENPDATYD 212
Query: 338 TKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSW-ALPRLTSRE 382
KSD++S G+ +E+ G P+ P L+ PRL S++
Sbjct: 213 FKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKK 258
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 11/187 (5%)
Query: 176 SDGTVAAIKKLHRDGKQRE-RAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
S G IK +++D Q E+++L L P ++++ D ++ ++ E
Sbjct: 45 SSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEG 104
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
G L + + R + L + AL + H + V+H+D K N+L
Sbjct: 105 GELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTS 161
Query: 295 R---AKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLE 351
K+ DFGLA++ + + ST GT Y+APE +T K D++S GVV+
Sbjct: 162 PHSPIKIIDFGLAELFK---SDEHSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYF 217
Query: 352 LLTGRVP 358
LLTG +P
Sbjct: 218 LLTGCLP 224
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
+Q E F ME ++S+ + +V +G R ++ E M G L+ L R RP
Sbjct: 74 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLR--ETRPRP 131
Query: 251 -----LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQNFRAKVTDFG 302
L L +A D A ++L E+ IHRD N LL AK+ DFG
Sbjct: 132 SQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG 188
Query: 303 LAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
+A+ + + + ++ PE G T+K+D +S+GV+L E+ + G +P
Sbjct: 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 245
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
EV+LL +L P +++L D + ++ E G L + + R+ D R+I
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHD-AARIIK 128
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLD---QNFRAKVTDFGLAKMVSDKINGQIS 316
+ + ++H+H ++HRD K N+LL+ ++ K+ DFGL+ N ++
Sbjct: 129 QV--FSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ--NTKMK 181
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
R+ GT Y+APE G K DV+S GV+L LL+G P
Sbjct: 182 DRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
EV+LL +L P +++L D + ++ E G L + + R+ D R+I
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHD-AARIIK 128
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLD---QNFRAKVTDFGLAKMVSDKINGQIS 316
+ + ++H+H ++HRD K N+LL+ ++ K+ DFGL+ N ++
Sbjct: 129 QV--FSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ--NTKMK 181
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
R+ GT Y+APE G K DV+S GV+L LL+G P
Sbjct: 182 DRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 95/194 (48%), Gaps = 26/194 (13%)
Query: 180 VAAIKKL---HR----DGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYM 232
+ AIKK+ HR DG R A R E+ LL L P ++ LL +++ L+ ++M
Sbjct: 37 IVAIKKIKLGHRSEAKDGINRT-ALR-EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 94
Query: 233 PNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQ 292
L+ + ++ P + +++ L LE+LH+H ++HRD K +N+LLD+
Sbjct: 95 ET-DLEVIIKDNSLVLTPSHIKAYMLMTLQ---GLEYLHQHW---ILHRDLKPNNLLLDE 147
Query: 293 NFRAKVTDFGLAKMVSDKING---QISTRVLGTTGYLAPEYASTGKL-TTKSDVYSYGVV 348
N K+ DFGLAK Q+ TR Y APE ++ D+++ G +
Sbjct: 148 NGVLKLADFGLAKSFGSPNRAYXHQVVTR-----WYRAPELLFGARMYGVGVDMWAVGCI 202
Query: 349 LLELLTGRVPVDPN 362
L ELL RVP P
Sbjct: 203 LAELLL-RVPFLPG 215
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 27/197 (13%)
Query: 177 DGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLV-------ELLGYCADQNHRLLIS 229
+ A+K L D +++ + DL+S + +++ LLG C +I
Sbjct: 55 EAVTVAVKMLKDDATEKDLS-----DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 109
Query: 230 EYMPNGTLQQHLHRHN----------NRY--RPLDWRTRLIIALDCAMALEFLHEHATPP 277
EY G L+++L NR + ++ + A +E+L A+
Sbjct: 110 EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQK 166
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLT 337
IHRD NVL+ +N K+ DFGLA+ +++ + +T ++APE T
Sbjct: 167 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 226
Query: 338 TKSDVYSYGVVLLELLT 354
+SDV+S+GV++ E+ T
Sbjct: 227 HQSDVWSFGVLMWEIFT 243
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 106/272 (38%), Gaps = 33/272 (12%)
Query: 181 AAIKKLHRDGKQRE-RAFRMEVDLLSRL-HSPQLVELLGYCADQNHRLL-ISEYMPNGTL 237
A+K L E RA E+ +L + H +V LLG C L+ I E+ G L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 238 QQHLHRHNNRYRP------------LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKC 285
+L N + P L + + A +EFL A+ IHRD
Sbjct: 122 STYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 178
Query: 286 SNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSY 345
N+LL + K+ DFGLA+ + + ++APE T +SDV+S+
Sbjct: 179 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 238
Query: 346 GVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXX 405
GV+L E+ + L + P + EE + + + P
Sbjct: 239 GVLLWEIFS---------------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY 283
Query: 406 XXXXVCVQPEAAYRPLMTDVVQSLIPVVKNNA 437
C E + RP +++V+ L +++ NA
Sbjct: 284 QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 315
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 27/198 (13%)
Query: 176 SDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLV-------ELLGYCADQNHRLLI 228
+ A+K L D +++ + DL+S + +++ LLG C +I
Sbjct: 57 KEAVTVAVKMLKDDATEKDLS-----DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 111
Query: 229 SEYMPNGTLQQHLHRHN----------NRY--RPLDWRTRLIIALDCAMALEFLHEHATP 276
EY G L+++L NR + ++ + A +E+L A+
Sbjct: 112 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQ 168
Query: 277 PVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
IHRD NVL+ +N K+ DFGLA+ +++ + +T ++APE
Sbjct: 169 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY 228
Query: 337 TTKSDVYSYGVVLLELLT 354
T +SDV+S+GV++ E+ T
Sbjct: 229 THQSDVWSFGVLMWEIFT 246
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 27/198 (13%)
Query: 176 SDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLV-------ELLGYCADQNHRLLI 228
+ A+K L D +++ + DL+S + +++ LLG C +I
Sbjct: 52 KEAVTVAVKMLKDDATEKDLS-----DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 106
Query: 229 SEYMPNGTLQQHLHRHN----------NRY--RPLDWRTRLIIALDCAMALEFLHEHATP 276
EY G L+++L NR + ++ + A +E+L A+
Sbjct: 107 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQ 163
Query: 277 PVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
IHRD NVL+ +N K+ DFGLA+ +++ + +T ++APE
Sbjct: 164 KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY 223
Query: 337 TTKSDVYSYGVVLLELLT 354
T +SDV+S+GV++ E+ T
Sbjct: 224 THQSDVWSFGVLMWEIFT 241
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
+Q E F ME ++S+ + +V +G R ++ E M G L+ L R RP
Sbjct: 89 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRE--TRPRP 146
Query: 251 -----LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQNFRAKVTDFG 302
L L +A D A ++L E+ IHRD N LL AK+ DFG
Sbjct: 147 SQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG 203
Query: 303 LAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
+A+ + + + ++ PE G T+K+D +S+GV+L E+ + G +P
Sbjct: 204 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 260
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 106/272 (38%), Gaps = 33/272 (12%)
Query: 181 AAIKKLHRDGKQRE-RAFRMEVDLLSRL-HSPQLVELLGYCADQNHRLL-ISEYMPNGTL 237
A+K L E RA E+ +L + H +V LLG C L+ I E+ G L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 238 QQHLHRHNNRYRP------------LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKC 285
+L N + P L + + A +EFL A+ IHRD
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 286 SNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSY 345
N+LL + K+ DFGLA+ + + ++APE T +SDV+S+
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 346 GVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXX 405
GV+L E+ + L + P + EE + + + P
Sbjct: 237 GVLLWEIFS---------------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY 281
Query: 406 XXXXVCVQPEAAYRPLMTDVVQSLIPVVKNNA 437
C E + RP +++V+ L +++ NA
Sbjct: 282 QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 26/203 (12%)
Query: 171 YKGV-LSDG----TVAAIKKLHRDGKQR-ERAFRMEVDLLSRLHSPQLVELLGYCADQNH 224
YKG+ + DG AIK L + + + E +++ + SP + LLG C
Sbjct: 34 YKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTV 93
Query: 225 RLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFK 284
+L +++ MP G L H+ + R D L + A + +L + ++HRD
Sbjct: 94 QL-VTQLMPYGCLLDHVRENRGRLGSQD---LLNWCMQIAKGMSYLEDVR---LVHRDLA 146
Query: 285 CSNVLLDQNFRAKVTDFGLAKMVS-DKI-----NGQISTRVLGTTGYLAPEYASTGKLTT 338
NVL+ K+TDFGLA+++ D+ G++ + ++A E + T
Sbjct: 147 ARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIK------WMALESILRRRFTH 200
Query: 339 KSDVYSYGVVLLELLT-GRVPVD 360
+SDV+SYGV + EL+T G P D
Sbjct: 201 QSDVWSYGVTVWELMTFGAKPYD 223
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 8/159 (5%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L +++S +V L ++ L+ M G L+ H++ P + R
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP-EARAVFYA 292
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A C LE LH +++RD K N+LLD + +++D GLA V + GQ
Sbjct: 293 AEICC-GLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPE---GQTIKGR 345
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
+GT GY+APE + T D ++ G +L E++ G+ P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 106/272 (38%), Gaps = 33/272 (12%)
Query: 181 AAIKKLHRDGKQRE-RAFRMEVDLLSRL-HSPQLVELLGYCADQNHRLL-ISEYMPNGTL 237
A+K L E RA E+ +L + H +V LLG C L+ I E+ G L
Sbjct: 97 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 156
Query: 238 QQHLHRHNNRYRP------------LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKC 285
+L N + P L + + A +EFL A+ IHRD
Sbjct: 157 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 213
Query: 286 SNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSY 345
N+LL + K+ DFGLA+ + + ++APE T +SDV+S+
Sbjct: 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 273
Query: 346 GVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQYPKKDLXXXX 405
GV+L E+ + L + P + EE + + + P
Sbjct: 274 GVLLWEIFS---------------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY 318
Query: 406 XXXXVCVQPEAAYRPLMTDVVQSLIPVVKNNA 437
C E + RP +++V+ L +++ NA
Sbjct: 319 QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 350
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 14/162 (8%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
EV+LL +L P +++L D + ++ E G L + + R+ D R+I
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHD-AARIIK 128
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLD---QNFRAKVTDFGLAKMVSDKINGQIS 316
+ + ++H+H ++HRD K N+LL+ ++ K+ DFGL+ N ++
Sbjct: 129 QVFSGIT--YMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ--NTKMK 181
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
R+ GT Y+APE G K DV+S GV+L LL+G P
Sbjct: 182 DRI-GTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 27/198 (13%)
Query: 176 SDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLV-------ELLGYCADQNHRLLI 228
+ A+K L D +++ + DL+S + +++ LLG C +I
Sbjct: 111 KEAVTVAVKMLKDDATEKDLS-----DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 165
Query: 229 SEYMPNGTLQQHLHRHN----------NRY--RPLDWRTRLIIALDCAMALEFLHEHATP 276
EY G L+++L NR + ++ + A +E+L A+
Sbjct: 166 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQ 222
Query: 277 PVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
IHRD NVL+ +N K+ DFGLA+ +++ + +T ++APE
Sbjct: 223 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY 282
Query: 337 TTKSDVYSYGVVLLELLT 354
T +SDV+S+GV++ E+ T
Sbjct: 283 THQSDVWSFGVLMWEIFT 300
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 27/198 (13%)
Query: 176 SDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLV-------ELLGYCADQNHRLLI 228
+ A+K L D +++ + DL+S + +++ LLG C +I
Sbjct: 65 KEAVTVAVKMLKDDATEKDLS-----DLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVI 119
Query: 229 SEYMPNGTLQQHLHRHN----------NRY--RPLDWRTRLIIALDCAMALEFLHEHATP 276
EY G L+++L NR + ++ + A +E+L A+
Sbjct: 120 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQ 176
Query: 277 PVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
IHRD NVL+ +N K+ DFGLA+ +++ + +T ++APE
Sbjct: 177 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY 236
Query: 337 TTKSDVYSYGVVLLELLT 354
T +SDV+S+GV++ E+ T
Sbjct: 237 THQSDVWSFGVLMWEIFT 254
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 39/204 (19%)
Query: 176 SDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLV-------ELLGYCADQNHRLLI 228
+ A+K L D +++ + DL+S + +++ LLG C +I
Sbjct: 65 KEAVTVAVKMLKDDATEKDLS-----DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 119
Query: 229 SEYMPNGTLQQHLHRHN----------NRY--RPLDWRTRLIIALDCAMALEFLHEHATP 276
EY G L+++L NR + ++ + A +E+L A+
Sbjct: 120 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQ 176
Query: 277 PVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS------DKINGQISTRVLGTTGYLAPEY 330
IHRD NVL+ +N K+ DFGLA+ ++ + NG++ + ++APE
Sbjct: 177 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVK------WMAPEA 230
Query: 331 ASTGKLTTKSDVYSYGVVLLELLT 354
T +SDV+S+GV++ E+ T
Sbjct: 231 LFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 19/189 (10%)
Query: 177 DGTVAAIKKLHRDGKQRERAFR---MEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMP 233
+ V AIKK+ GKQ ++ EV L +L P ++ G ++ L+ EY
Sbjct: 39 NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL 98
Query: 234 NGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQN 293
G+ L H +PL + L +LH H +IHRD K N+LL +
Sbjct: 99 -GSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEP 151
Query: 294 FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEY---ASTGKLTTKSDVYSYGVVLL 350
K+ DFG A +++ + +GT ++APE G+ K DV+S G+ +
Sbjct: 152 GLVKLGDFGSASIMAP------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 205
Query: 351 ELLTGRVPV 359
EL + P+
Sbjct: 206 ELAERKPPL 214
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
+Q E F ME ++S+ + +V +G R ++ E M G L+ L R RP
Sbjct: 89 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE--TRPRP 146
Query: 251 -----LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQNFRAKVTDFG 302
L L +A D A ++L E+ IHRD N LL AK+ DFG
Sbjct: 147 SQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG 203
Query: 303 LAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
+A+ + + + ++ PE G T+K+D +S+GV+L E+ + G +P
Sbjct: 204 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 260
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 8/159 (5%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E +L +++S +V L ++ L+ M G L+ H++ P + R
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP-EARAVFYA 292
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
A C LE LH +++RD K N+LLD + +++D GLA V + GQ
Sbjct: 293 AEICC-GLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPE---GQTIKGR 345
Query: 320 LGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
+GT GY+APE + T D ++ G +L E++ G+ P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
+Q E F ME ++S+ + +V +G R ++ E M G L+ L R RP
Sbjct: 74 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRP 131
Query: 251 -----LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQNFRAKVTDFG 302
L L +A D A ++L E+ IHRD N LL AK+ DFG
Sbjct: 132 SQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG 188
Query: 303 LAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
+A+ + + + ++ PE G T+K+D +S+GV+L E+ + G +P
Sbjct: 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 245
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 27/198 (13%)
Query: 176 SDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLV-------ELLGYCADQNHRLLI 228
+ A+K L D +++ + DL+S + +++ LLG C +I
Sbjct: 65 KEAVTVAVKMLKDDATEKDLS-----DLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVI 119
Query: 229 SEYMPNGTLQQHLHRHN----------NRY--RPLDWRTRLIIALDCAMALEFLHEHATP 276
EY G L+++L NR + ++ + A +E+L A+
Sbjct: 120 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQ 176
Query: 277 PVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
IHRD NVL+ +N K+ DFGLA+ +++ + +T ++APE
Sbjct: 177 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY 236
Query: 337 TTKSDVYSYGVVLLELLT 354
T +SDV+S+GV++ E+ T
Sbjct: 237 THQSDVWSFGVLMWEIFT 254
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
+Q E F ME ++S+ + +V +G R ++ E M G L+ L R RP
Sbjct: 75 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRP 132
Query: 251 -----LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQNFRAKVTDFG 302
L L +A D A ++L E+ IHRD N LL AK+ DFG
Sbjct: 133 SQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG 189
Query: 303 LAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
+A+ + + + ++ PE G T+K+D +S+GV+L E+ + G +P
Sbjct: 190 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 246
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 12/168 (7%)
Query: 196 AFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRT 255
FR E D+L + L D+NH L+ +Y G L L + ++ P D
Sbjct: 120 CFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKL-PED-MA 177
Query: 256 RLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQI 315
R I + +A++ +H+ +HRD K NVLLD N ++ DFG ++D Q
Sbjct: 178 RFYIG-EMVLAIDSIHQLH---YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQS 233
Query: 316 STRVLGTTGYLAPEYAST-----GKLTTKSDVYSYGVVLLELLTGRVP 358
S V GT Y++PE GK + D +S GV + E+L G P
Sbjct: 234 SVAV-GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
EV +L +L P +++L + D+ + L+ E G L + ++ +D +I
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ-KFSEVD---AAVI 126
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR---AKVTDFGLAKMVSDKINGQIS 316
+LH+H ++HRD K N+LL+ R K+ DFGL+ ++ G++
Sbjct: 127 MKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMK 181
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
R LGT Y+APE K K DV+S GV+L LL G P
Sbjct: 182 ER-LGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPP 221
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 12/168 (7%)
Query: 196 AFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRT 255
FR E D+L + L D+NH L+ +Y G L L + ++ P D
Sbjct: 136 CFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKL-PED-MA 193
Query: 256 RLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQI 315
R I + +A++ +H+ +HRD K NVLLD N ++ DFG ++D Q
Sbjct: 194 RFYIG-EMVLAIDSIHQLH---YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQS 249
Query: 316 STRVLGTTGYLAPEYAST-----GKLTTKSDVYSYGVVLLELLTGRVP 358
S V GT Y++PE GK + D +S GV + E+L G P
Sbjct: 250 SVAV-GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
+Q E F ME ++S+ + +V +G R ++ E M G L+ L R RP
Sbjct: 66 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRP 123
Query: 251 -----LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQNFRAKVTDFG 302
L L +A D A ++L E+ IHRD N LL AK+ DFG
Sbjct: 124 SQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG 180
Query: 303 LAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
+A+ + + + ++ PE G T+K+D +S+GV+L E+ + G +P
Sbjct: 181 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 237
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 14/181 (7%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTL 237
+AA K + ++ + +E+D+L+ P +V+LL +N+ ++ E+ G +
Sbjct: 35 SVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV 94
Query: 238 QQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAK 297
+ RPL ++ AL +LH++ +IHRD K N+L + K
Sbjct: 95 DAVMLELE---RPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIK 148
Query: 298 VTDFGL-AKMVSDKINGQISTRVLGTTGYLAPE--YASTGK---LTTKSDVYSYGVVLLE 351
+ DFG+ AK I + S +GT ++APE T K K+DV+S G+ L+E
Sbjct: 149 LADFGVSAKNTRTXIQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIE 206
Query: 352 L 352
+
Sbjct: 207 M 207
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
+Q E F ME ++S+ + +V +G R ++ E M G L+ L R RP
Sbjct: 81 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRP 138
Query: 251 -----LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQNFRAKVTDFG 302
L L +A D A ++L E+ IHRD N LL AK+ DFG
Sbjct: 139 SQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG 195
Query: 303 LAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
+A+ + + + ++ PE G T+K+D +S+GV+L E+ + G +P
Sbjct: 196 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 252
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 16/222 (7%)
Query: 178 GTVAAIKKLHR--DGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNG 235
G + AIKK D K ++ E+ LL +L LV LL C + L+ E++ +
Sbjct: 50 GRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH- 108
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
T+ L N LD++ + F H H +IHRD K N+L+ Q+
Sbjct: 109 TILDDLELFPN---GLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGV 162
Query: 296 AKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE-YASTGKLTTKSDVYSYGVVLLELLT 354
K+ DFG A+ ++ G++ + T Y APE K DV++ G ++ E+
Sbjct: 163 VKLCDFGFARTLA--APGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFM 220
Query: 355 GR--VPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQG 394
G P D + H+++ L L R + + +P G
Sbjct: 221 GEPLFPGDSDIDQLYHIMM--CLGNLIPRHQELFNKNPVFAG 260
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
+Q E F ME ++S+ + +V +G R ++ E M G L+ L R RP
Sbjct: 75 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE--TRPRP 132
Query: 251 -----LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQNFRAKVTDFG 302
L L +A D A ++L E+ IHRD N LL AK+ DFG
Sbjct: 133 SQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG 189
Query: 303 LAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
+A+ + + + ++ PE G T+K+D +S+GV+L E+ + G +P
Sbjct: 190 MAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 246
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 27/201 (13%)
Query: 175 LSDGTVAAIKKLHRD-GKQRERAFRMEVDLLSRLHSPQ-LVELLGYCADQNHRLLISEYM 232
L +G A+K + + G R R FR EV+ L + + ++EL+ + D L+ E +
Sbjct: 35 LQNGKEYAVKIIEKQAGHSRSRVFR-EVETLYQCQGNKNILELIEFFEDDTRFYLVFEKL 93
Query: 233 PNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQ 292
G++ H+ + + + R + D A AL+FLH T + HRD K N+L +
Sbjct: 94 QGGSILAHIQKQKH----FNEREASRVVRDVAAALDFLH---TKGIAHRDLKPENILCES 146
Query: 293 NFR---AKVTDFGLAKMVSDKINGQIS-------TRVLGTTGYLAPEYAS--TGKLT--- 337
+ K+ DF L + K+N + T G+ Y+APE T + T
Sbjct: 147 PEKVSPVKICDFDLGSGM--KLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYD 204
Query: 338 TKSDVYSYGVVLLELLTGRVP 358
+ D++S GVVL +L+G P
Sbjct: 205 KRCDLWSLGVVLYIMLSGYPP 225
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 14/162 (8%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
EV +L +L P +++L + D+ + L+ E G L + ++ +D +I
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ-KFSEVD---AAVI 109
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR---AKVTDFGLAKMVSDKINGQIS 316
+LH+H ++HRD K N+LL+ R K+ DFGL+ ++ G++
Sbjct: 110 MKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMK 164
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
R LGT Y+APE K K DV+S GV+L LL G P
Sbjct: 165 ER-LGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPP 204
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
+Q E F ME ++S+ + +V +G R ++ E M G L+ L R RP
Sbjct: 101 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRP 158
Query: 251 -----LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQNFRAKVTDFG 302
L L +A D A ++L E+ IHRD N LL AK+ DFG
Sbjct: 159 SQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG 215
Query: 303 LAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
+A+ + + + ++ PE G T+K+D +S+GV+L E+ + G +P
Sbjct: 216 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 272
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
+Q E F ME ++S+ + +V +G R ++ E M G L+ L R RP
Sbjct: 91 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRP 148
Query: 251 -----LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQNFRAKVTDFG 302
L L +A D A ++L E+ IHRD N LL AK+ DFG
Sbjct: 149 SQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG 205
Query: 303 LAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
+A+ + + + ++ PE G T+K+D +S+GV+L E+ + G +P
Sbjct: 206 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 262
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
+Q E F ME ++S+ + +V +G R ++ E M G L+ L R RP
Sbjct: 92 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRP 149
Query: 251 -----LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQNFRAKVTDFG 302
L L +A D A ++L E+ IHRD N LL AK+ DFG
Sbjct: 150 SQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG 206
Query: 303 LAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
+A+ + + + ++ PE G T+K+D +S+GV+L E+ + G +P
Sbjct: 207 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 263
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP 250
+Q E F ME ++S+ + +V +G R ++ E M G L+ L R RP
Sbjct: 115 EQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR--ETRPRP 172
Query: 251 -----LDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQNFRAKVTDFG 302
L L +A D A ++L E+ IHRD N LL AK+ DFG
Sbjct: 173 SQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFG 229
Query: 303 LAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVP 358
+A+ + + + ++ PE G T+K+D +S+GV+L E+ + G +P
Sbjct: 230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 286
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 27/198 (13%)
Query: 176 SDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLV-------ELLGYCADQNHRLLI 228
+ A+K L D + + + DL+S + +++ LLG C +I
Sbjct: 65 KEAVTVAVKMLKDDATEEDLS-----DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 119
Query: 229 SEYMPNGTLQQHLHRHN----------NRY--RPLDWRTRLIIALDCAMALEFLHEHATP 276
EY G L+++L NR + ++ + A +E+L A+
Sbjct: 120 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQ 176
Query: 277 PVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
IHRD NVL+ +N K+ DFGLA+ +++ + +T ++APE
Sbjct: 177 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY 236
Query: 337 TTKSDVYSYGVVLLELLT 354
T +SDV+S+GV++ E+ T
Sbjct: 237 THQSDVWSFGVLMWEIFT 254
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 11/169 (6%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E ++ +L +P +V L+G C + +L+ E G L + L P+ L+
Sbjct: 60 EAQIMHQLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVGKREEI-PVSNVAELLH 117
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRV 319
+ +M +++L E +HRD NVLL AK++DFGL+K + + + R
Sbjct: 118 QV--SMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGAD-DSYYTARS 171
Query: 320 LGT--TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVDPNRPP 365
G + APE + K +++SDV+SYGV + E L+ G+ P + P
Sbjct: 172 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP 220
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 94/196 (47%), Gaps = 31/196 (15%)
Query: 182 AIKKLHRD-GKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRL-LISEYMPNGTLQQ 239
A+K + + G R R FR EV++L + + V L ++ R L+ E M G++
Sbjct: 42 AVKIIEKQPGHIRSRVFR-EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILS 100
Query: 240 HLH--RHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD---QNF 294
H+H RH N ++ D A AL+FLH + HRD K N+L + Q
Sbjct: 101 HIHKRRHFNELEA------SVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVS 151
Query: 295 RAKVTDFGLAKMVSDKINGQ---ISTRVL----GTTGYLAPE----YASTGKLTTK-SDV 342
K+ DFGL + K+NG IST L G+ Y+APE ++ + K D+
Sbjct: 152 PVKICDFGLGSGI--KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDL 209
Query: 343 YSYGVVLLELLTGRVP 358
+S GV+L LL+G P
Sbjct: 210 WSLGVILYILLSGYPP 225
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 86/170 (50%), Gaps = 17/170 (10%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E+++L +L+ P ++++ + +++ +++ E M G L + N R + +
Sbjct: 71 EIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKV-VGNKRLKEATCKLYFYQ 128
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQNFRAKVTDFGLAKMVSDKINGQIS 316
L +A+++LHE+ +IHRD K NVLL +++ K+TDFG +K++ + +
Sbjct: 129 ML---LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET---SLM 179
Query: 317 TRVLGTTGYLAPEY---ASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNR 363
+ GT YLAPE T D +S GV+L L+G P +R
Sbjct: 180 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 229
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 27/198 (13%)
Query: 176 SDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLV-------ELLGYCADQNHRLLI 228
+ A+K L D +++ + DL+S + +++ LLG C +I
Sbjct: 65 KEAVTVAVKMLKDDATEKDLS-----DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 119
Query: 229 SEYMPNGTLQQHLHRHN----------NRY--RPLDWRTRLIIALDCAMALEFLHEHATP 276
EY G L+++L NR + ++ + A +E+L A+
Sbjct: 120 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQ 176
Query: 277 PVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
IHRD NVL+ +N ++ DFGLA+ +++ + +T ++APE
Sbjct: 177 KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY 236
Query: 337 TTKSDVYSYGVVLLELLT 354
T +SDV+S+GV++ E+ T
Sbjct: 237 THQSDVWSFGVLMWEIFT 254
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I++ MP G L ++ H + L+W +
Sbjct: 74 EAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 132
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN---- 312
+ A + +L + ++HRD NVL+ K+TDFGLAK++ +
Sbjct: 133 I------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 313 --GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 184 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I++ MP G L ++ H + L+W +
Sbjct: 73 EAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 131
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDK------ 310
+ A + +L + ++HRD NVL+ K+TDFGLAK++ +
Sbjct: 132 I------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 182
Query: 311 INGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 183 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 86/170 (50%), Gaps = 17/170 (10%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E+++L +L+ P ++++ + +++ +++ E M G L + N R + +
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKV-VGNKRLKEATCKLYFYQ 122
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQNFRAKVTDFGLAKMVSDKINGQIS 316
L +A+++LHE+ +IHRD K NVLL +++ K+TDFG +K++ + +
Sbjct: 123 ML---LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET---SLM 173
Query: 317 TRVLGTTGYLAPEY---ASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNR 363
+ GT YLAPE T D +S GV+L L+G P +R
Sbjct: 174 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 86/170 (50%), Gaps = 17/170 (10%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E+++L +L+ P ++++ + +++ +++ E M G L + N R + +
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKV-VGNKRLKEATCKLYFYQ 122
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQNFRAKVTDFGLAKMVSDKINGQIS 316
L +A+++LHE+ +IHRD K NVLL +++ K+TDFG +K++ + +
Sbjct: 123 ML---LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET---SLM 173
Query: 317 TRVLGTTGYLAPEY---ASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNR 363
+ GT YLAPE T D +S GV+L L+G P +R
Sbjct: 174 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I++ MP G L ++ H + L+W +
Sbjct: 74 EAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 132
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDK------ 310
+ A + +L + ++HRD NVL+ K+TDFGLAK++ +
Sbjct: 133 I------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 311 INGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 184 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 86/170 (50%), Gaps = 17/170 (10%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E+++L +L+ P ++++ + +++ +++ E M G L + N R + +
Sbjct: 64 EIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKV-VGNKRLKEATCKLYFYQ 121
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQNFRAKVTDFGLAKMVSDKINGQIS 316
L +A+++LHE+ +IHRD K NVLL +++ K+TDFG +K++ + +
Sbjct: 122 ML---LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET---SLM 172
Query: 317 TRVLGTTGYLAPEY---ASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNR 363
+ GT YLAPE T D +S GV+L L+G P +R
Sbjct: 173 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 222
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I++ MP G L ++ H + L+W +
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 125
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN---- 312
+ A + +L + ++HRD NVL+ K+TDFGLAK++ +
Sbjct: 126 I------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 313 --GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 177 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 86/170 (50%), Gaps = 17/170 (10%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E+++L +L+ P ++++ + +++ +++ E M G L + N R + +
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKV-VGNKRLKEATCKLYFYQ 122
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQNFRAKVTDFGLAKMVSDKINGQIS 316
L +A+++LHE+ +IHRD K NVLL +++ K+TDFG +K++ + +
Sbjct: 123 ML---LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET---SLM 173
Query: 317 TRVLGTTGYLAPEY---ASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNR 363
+ GT YLAPE T D +S GV+L L+G P +R
Sbjct: 174 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I++ MP G L ++ H + L+W +
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 125
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN---- 312
+ A + +L + ++HRD NVL+ K+TDFGLAK++ +
Sbjct: 126 I------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 313 --GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 177 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I++ MP G L ++ H + L+W +
Sbjct: 69 EAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 127
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDK------ 310
+ A + +L + ++HRD NVL+ K+TDFGLAK++ +
Sbjct: 128 I------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 178
Query: 311 INGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 179 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I++ MP G L ++ H + L+W +
Sbjct: 92 EAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 150
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN---- 312
+ A + +L + ++HRD NVL+ K+TDFGLAK++ +
Sbjct: 151 I------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 201
Query: 313 --GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 202 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 108/258 (41%), Gaps = 52/258 (20%)
Query: 177 DGTVAAIKKLHRDGKQ--RERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
D AIK++ ++ RE+ R EV L++L P +V ++N + P
Sbjct: 29 DDCNYAIKRIRLPNRELAREKVMR-EVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPK 87
Query: 235 GTL--QQHLHRHNNRYRPLDW---------RTRLI---IALDCAMALEFLHEHATPPVIH 280
L Q L R N DW R R + I L A A+EFLH ++H
Sbjct: 88 VYLYIQMQLCRKENLK---DWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMH 141
Query: 281 RDFKCSNVLLDQNFRAKVTDFGLAK-MVSDKINGQISTRV---------LGTTGYLAPEY 330
RD K SN+ + KV DFGL M D+ + T + +GT Y++PE
Sbjct: 142 RDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQ 201
Query: 331 ASTGKLTTKSDVYSYGVVLLELL------TGRV------------PVDPNRPPGEHVLVS 372
+ K D++S G++L ELL RV P+ + P E+V+V
Sbjct: 202 IHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQ 261
Query: 373 WAL-PRLTSREEAVEMVD 389
L P R EA+ +++
Sbjct: 262 DMLSPSPMERPEAINIIE 279
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 86/170 (50%), Gaps = 17/170 (10%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E+++L +L+ P ++++ + +++ +++ E M G L + N R + +
Sbjct: 190 EIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKV-VGNKRLKEATCKLYFYQ 247
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQNFRAKVTDFGLAKMVSDKINGQIS 316
L +A+++LHE+ +IHRD K NVLL +++ K+TDFG +K++ + +
Sbjct: 248 ML---LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET---SLM 298
Query: 317 TRVLGTTGYLAPEY---ASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNR 363
+ GT YLAPE T D +S GV+L L+G P +R
Sbjct: 299 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 348
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I++ MP G L ++ H + L+W +
Sbjct: 70 EAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 128
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDK------ 310
+ A + +L + ++HRD NVL+ K+TDFGLAK++ +
Sbjct: 129 I------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 311 INGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 180 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I++ MP G L ++ H + L+W +
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 125
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN---- 312
+ A + +L + ++HRD NVL+ K+TDFGLAK++ +
Sbjct: 126 I------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 313 --GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 177 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I++ MP G L ++ H + L+W +
Sbjct: 70 EAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 128
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN---- 312
+ A + +L + ++HRD NVL+ K+TDFGLAK++ +
Sbjct: 129 I------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 313 --GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 180 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 193 RERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLD 252
RE+ F E + + P +V+L+G +N +I E G L+ L R LD
Sbjct: 435 REK-FLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQV---RKFSLD 489
Query: 253 WRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN 312
+ ++ A + AL +L + +HRD NVL+ K+ DFGL++ + D
Sbjct: 490 LASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTY 546
Query: 313 GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT------------------ 354
+ S L ++APE + + T+ SDV+ +GV + E+L
Sbjct: 547 YKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
Query: 355 ---GRVPVDPNRPPGEHVLVS--WAL-----PRLT 379
R+P+ PN PP + L++ WA PR T
Sbjct: 606 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 640
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I++ MP G L ++ H + L+W +
Sbjct: 61 EAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 119
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN---- 312
+ A + +L + ++HRD NVL+ K+TDFGLAK++ +
Sbjct: 120 I------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 170
Query: 313 --GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 171 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I++ MP G L ++ H + L+W +
Sbjct: 70 EAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 128
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN---- 312
+ A + +L + ++HRD NVL+ K+TDFGLAK++ +
Sbjct: 129 I------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 313 --GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 180 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I++ MP G L ++ H + L+W
Sbjct: 77 EAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNW--- 132
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN---- 312
+ A + +L + ++HRD NVL+ K+TDFGLAK++ +
Sbjct: 133 ---CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 186
Query: 313 --GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 187 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 86/170 (50%), Gaps = 17/170 (10%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E+++L +L+ P ++++ + +++ +++ E M G L + N R + +
Sbjct: 204 EIEILKKLNHPCIIKIKNFFDAEDYYIVL-ELMEGGELFDKV-VGNKRLKEATCKLYFYQ 261
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQNFRAKVTDFGLAKMVSDKINGQIS 316
L +A+++LHE+ +IHRD K NVLL +++ K+TDFG +K++ + +
Sbjct: 262 ML---LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET---SLM 312
Query: 317 TRVLGTTGYLAPEY---ASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNR 363
+ GT YLAPE T D +S GV+L L+G P +R
Sbjct: 313 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 362
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I++ MP G L ++ H + L+W
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGXLLDYVREHKDNIGSQYLLNW--- 122
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN---- 312
+ A + +L + ++HRD NVL+ K+TDFGLAK++ +
Sbjct: 123 ---CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 313 --GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 177 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
AL +LH VIHRD K ++LL + R K++DFG +S + + ++GT +
Sbjct: 153 ALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR--KXLVGTPYW 207
Query: 326 LAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRP 364
+APE S T+ D++S G++++E++ G P + P
Sbjct: 208 MAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP 246
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 15/196 (7%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLL 227
YK S G + A+K++ D + A R E+ LL LH P +V L+ + L
Sbjct: 38 YKAKDSQGRIVALKRIRLDAEDEGIPSTAIR-EISLLKELHHPNIVSLIDVIHSERCLTL 96
Query: 228 ISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSN 287
+ E+M L++ L + + + L L + H+H ++HRD K N
Sbjct: 97 VFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLL---RGVAHCHQHR---ILHRDLKPQN 149
Query: 288 VLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE-YASTGKLTTKSDVYSYG 346
+L++ + K+ DFGLA+ + T + T Y AP+ + K +T D++S G
Sbjct: 150 LLINSDGALKLADFGLARAFGIPVRS--YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIG 207
Query: 347 VVLLELLTGRVPVDPN 362
+ E++TG+ P+ P
Sbjct: 208 CIFAEMITGK-PLFPG 222
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 180 VAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
V I K K + + EV LL +L P +++L + D+ + L+ E G L
Sbjct: 80 VKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFD 139
Query: 240 HLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL-----DQNF 294
+ R+ +D R+I + + ++H++ ++HRD K N+LL D N
Sbjct: 140 EIISRK-RFSEVD-AARIIRQV--LSGITYMHKN---KIVHRDLKPENLLLESKSKDANI 192
Query: 295 RAKVTDFGLA------KMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
R + DFGL+ K + DKI GT Y+APE G K DV+S GV+
Sbjct: 193 R--IIDFGLSTHFEASKKMKDKI---------GTAYYIAPEVLH-GTYDEKCDVWSTGVI 240
Query: 349 LLELLTGRVPVD 360
L LL+G P +
Sbjct: 241 LYILLSGCPPFN 252
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 180 VAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
V I K K + + EV LL +L P +++L + D+ + L+ E G L
Sbjct: 79 VKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFD 138
Query: 240 HLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL-----DQNF 294
+ R+ +D R+I + + ++H++ ++HRD K N+LL D N
Sbjct: 139 EIISRK-RFSEVD-AARIIRQV--LSGITYMHKN---KIVHRDLKPENLLLESKSKDANI 191
Query: 295 RAKVTDFGLA------KMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
R + DFGL+ K + DKI GT Y+APE G K DV+S GV+
Sbjct: 192 R--IIDFGLSTHFEASKKMKDKI---------GTAYYIAPEVLH-GTYDEKCDVWSTGVI 239
Query: 349 LLELLTGRVPVD 360
L LL+G P +
Sbjct: 240 LYILLSGCPPFN 251
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 15/196 (7%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLL 227
YK S G + A+K++ D + A R E+ LL LH P +V L+ + L
Sbjct: 38 YKAKDSQGRIVALKRIRLDAEDEGIPSTAIR-EISLLKELHHPNIVSLIDVIHSERCLTL 96
Query: 228 ISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSN 287
+ E+M L++ L + + + L L + H+H ++HRD K N
Sbjct: 97 VFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLL---RGVAHCHQHR---ILHRDLKPQN 149
Query: 288 VLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE-YASTGKLTTKSDVYSYG 346
+L++ + K+ DFGLA+ + T + T Y AP+ + K +T D++S G
Sbjct: 150 LLINSDGALKLADFGLARAFGIPVRS--YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIG 207
Query: 347 VVLLELLTGRVPVDPN 362
+ E++TG+ P+ P
Sbjct: 208 CIFAEMITGK-PLFPG 222
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 30/192 (15%)
Query: 180 VAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
V I K K + + EV LL +L P +++L + D+ + L+ E G L
Sbjct: 62 VKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFD 121
Query: 240 HLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL-----DQNF 294
+ R+ +D R+I + ++H++ ++HRD K N+LL D N
Sbjct: 122 EII-SRKRFSEVD-AARII--RQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANI 174
Query: 295 RAKVTDFGLA------KMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
R + DFGL+ K + DKI GT Y+APE G K DV+S GV+
Sbjct: 175 R--IIDFGLSTHFEASKKMKDKI---------GTAYYIAPEVLH-GTYDEKCDVWSTGVI 222
Query: 349 LLELLTGRVPVD 360
L LL+G P +
Sbjct: 223 LYILLSGCPPFN 234
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I++ MP G L ++ H + L+W
Sbjct: 101 EAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNW--- 156
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN---- 312
+ A + +L + ++HRD NVL+ K+TDFGLAK++ +
Sbjct: 157 ---CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 210
Query: 313 --GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 211 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I++ MP G L ++ H + L+W +
Sbjct: 64 EAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 122
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN---- 312
+ A + +L + ++HRD NVL+ K+TDFGLAK++ +
Sbjct: 123 I------AEGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 173
Query: 313 --GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 174 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 10/172 (5%)
Query: 199 MEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLI 258
+E +L+++HS +V L + L+ M G ++ H++ + +
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 259 IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTR 318
LE LH+ +I+RD K NVLLD + +++D GLA + GQ T+
Sbjct: 294 YTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK---AGQTKTK 347
Query: 319 -VLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHV 369
GT G++APE + D ++ GV L E++ R P R GE V
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF---RARGEKV 396
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 32/221 (14%)
Query: 178 GTVAAIKKL---HRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G + AIKK D ++ A R E+ +L +L P LV LL + L+ EY +
Sbjct: 28 GQIVAIKKFLESEDDPVIKKIALR-EIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDH 86
Query: 235 GTLQQHLHRHN-----NRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
L + L R+ + + + W+T A+ F H+H IHRD K N+L
Sbjct: 87 TVLHE-LDRYQRGVPEHLVKSITWQT--------LQAVNFCHKHNC---IHRDVKPENIL 134
Query: 290 LDQNFRAKVTDFGLAKMV---SDKINGQISTRVLGTTGYLAPE-YASTGKLTTKSDVYSY 345
+ ++ K+ DFG A+++ SD + +++TR Y +PE + DV++
Sbjct: 135 ITKHSVIKLCDFGFARLLTGPSDYYDDEVATR-----WYRSPELLVGDTQYGPPVDVWAI 189
Query: 346 GVVLLELLTGRVPVDPNRPPGEHV-LVSWALPRLTSREEAV 385
G V ELL+G VP+ P + + + L+ L L R + V
Sbjct: 190 GCVFAELLSG-VPLWPGKSDVDQLYLIRKTLGDLIPRHQQV 229
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 87/190 (45%), Gaps = 30/190 (15%)
Query: 180 VAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
V I K K + + EV LL +L P +++L + D+ + L+ E G L
Sbjct: 56 VKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFD 115
Query: 240 HLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL-----DQNF 294
+ R+ +D R+I + + ++H++ ++HRD K N+LL D N
Sbjct: 116 EIISRK-RFSEVD-AARIIRQV--LSGITYMHKN---KIVHRDLKPENLLLESKSKDANI 168
Query: 295 RAKVTDFGLA------KMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
R + DFGL+ K + DKI GT Y+APE G K DV+S GV+
Sbjct: 169 R--IIDFGLSTHFEASKKMKDKI---------GTAYYIAPEVLH-GTYDEKCDVWSTGVI 216
Query: 349 LLELLTGRVP 358
L LL+G P
Sbjct: 217 LYILLSGCPP 226
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 8/124 (6%)
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
E+ GTL+Q + + R LD L + ++++H + +IHRD K SN+
Sbjct: 114 EFCDKGTLEQWIEKR--RGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIF 168
Query: 290 LDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVL 349
L + K+ DFGL + S K +G+ TR GT Y++PE S+ + D+Y+ G++L
Sbjct: 169 LVDTKQVKIGDFGL--VTSLKNDGK-RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLIL 225
Query: 350 LELL 353
ELL
Sbjct: 226 AELL 229
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I + MP G L ++ H + L+W +
Sbjct: 74 EAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 132
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN---- 312
+ A + +L + ++HRD NVL+ K+TDFGLAK++ +
Sbjct: 133 I------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 313 --GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 184 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 37/215 (17%)
Query: 193 RERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLD 252
RE+ F E + + P +V+L+G +N +I E G L+ L R LD
Sbjct: 55 REK-FLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQ---VRKFSLD 109
Query: 253 WRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN 312
+ ++ A + AL +L +HRD NVL+ K+ DFGL++ + D
Sbjct: 110 LASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTY 166
Query: 313 GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT------------------ 354
+ S L ++APE + + T+ SDV+ +GV + E+L
Sbjct: 167 YKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
Query: 355 ---GRVPVDPNRPPGEHVLVS--WAL-----PRLT 379
R+P+ PN PP + L++ WA PR T
Sbjct: 226 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 260
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 14/189 (7%)
Query: 178 GTVAAIKKLHRD--GKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNG 235
G + AIK + ++ G R + E++ L L + +L N ++ EY P G
Sbjct: 35 GEMVAIKIMDKNTLGSDLPR-IKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGG 93
Query: 236 TLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
L ++ + R + TR++ A+ ++H HRD K N+L D+ +
Sbjct: 94 ELFDYIISQD---RLSEEETRVVFR-QIVSAVAYVHSQGYA---HRDLKPENLLFDEYHK 146
Query: 296 AKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK--LTTKSDVYSYGVVLLELL 353
K+ DFGL + + T G+ Y APE GK L +++DV+S G++L L+
Sbjct: 147 LKLIDFGLCAKPKGNKDYHLQT-CCGSLAYAAPELIQ-GKSYLGSEADVWSMGILLYVLM 204
Query: 354 TGRVPVDPN 362
G +P D +
Sbjct: 205 CGFLPFDDD 213
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 66/139 (47%), Gaps = 23/139 (16%)
Query: 230 EYMPNGTLQQHLHRHN-NRYRPLDWRT-RLIIALDCAMALEFLHEHATPPVIHRDFKCSN 287
EY N TL +H N N+ R WR R I+ AL ++H +IHRD K N
Sbjct: 95 EYCENRTLYDLIHSENLNQQRDEYWRLFRQILE-----ALSYIHSQG---IIHRDLKPMN 146
Query: 288 VLLDQNFRAKVTDFGLAKMV----------SDKINGQIS--TRVLGTTGYLAPEYA-STG 334
+ +D++ K+ DFGLAK V S + G T +GT Y+A E TG
Sbjct: 147 IFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTG 206
Query: 335 KLTTKSDVYSYGVVLLELL 353
K D+YS G++ E++
Sbjct: 207 HYNEKIDMYSLGIIFFEMI 225
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I + MP G L ++ H + L+W +
Sbjct: 68 EAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 126
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN---- 312
+ A + +L + ++HRD NVL+ K+TDFGLAK++ +
Sbjct: 127 I------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 177
Query: 313 --GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 178 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 10/172 (5%)
Query: 199 MEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLI 258
+E +L+++HS +V L + L+ M G ++ H++ + +
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 259 IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTR 318
LE LH+ +I+RD K NVLLD + +++D GLA + GQ T+
Sbjct: 294 YTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK---AGQTKTK 347
Query: 319 -VLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHV 369
GT G++APE + D ++ GV L E++ R P R GE V
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF---RARGEKV 396
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I + MP G L ++ H + L+W +
Sbjct: 69 EAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 127
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDK------ 310
+ A + +L + ++HRD NVL+ K+TDFGLAK++ +
Sbjct: 128 I------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 178
Query: 311 INGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 179 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I + MP G L ++ H + L+W +
Sbjct: 71 EAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 129
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDK------ 310
+ A + +L + ++HRD NVL+ K+TDFGLAK++ +
Sbjct: 130 I------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 180
Query: 311 INGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 181 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I + MP G L ++ H + L+W +
Sbjct: 70 EAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 128
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN---- 312
+ A + +L + ++HRD NVL+ K+TDFGLAK++ +
Sbjct: 129 I------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 313 --GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 180 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 10/172 (5%)
Query: 199 MEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLI 258
+E +L+++HS +V L + L+ M G ++ H++ + +
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 259 IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTR 318
LE LH+ +I+RD K NVLLD + +++D GLA + GQ T+
Sbjct: 294 YTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK---AGQTKTK 347
Query: 319 -VLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHV 369
GT G++APE + D ++ GV L E++ R P R GE V
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF---RARGEKV 396
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I + MP G L ++ H + L+W
Sbjct: 68 EAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGXLLDYVREHKDNIGSQYLLNW--- 123
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN---- 312
+ A + +L + ++HRD NVL+ K+TDFGLAK++ +
Sbjct: 124 ---CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 177
Query: 313 --GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 178 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 27/198 (13%)
Query: 176 SDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLV-------ELLGYCADQNHRLLI 228
+ A+K L D +++ + DL+S + +++ LLG C +I
Sbjct: 65 KEAVTVAVKMLKDDATEKDLS-----DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 119
Query: 229 SEYMPNGTLQQHLHRHN----------NRY--RPLDWRTRLIIALDCAMALEFLHEHATP 276
Y G L+++L NR + ++ + A +E+L A+
Sbjct: 120 VAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQ 176
Query: 277 PVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
IHRD NVL+ +N K+ DFGLA+ +++ + +T ++APE
Sbjct: 177 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY 236
Query: 337 TTKSDVYSYGVVLLELLT 354
T +SDV+S+GV++ E+ T
Sbjct: 237 THQSDVWSFGVLMWEIFT 254
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I + MP G L ++ H + L+W +
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 125
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN---- 312
+ A + +L + ++HRD NVL+ K+TDFGLAK++ +
Sbjct: 126 I------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 313 --GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 177 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 10/172 (5%)
Query: 199 MEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLI 258
+E +L+++HS +V L + L+ M G ++ H++ + +
Sbjct: 234 VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 259 IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTR 318
LE LH+ +I+RD K NVLLD + +++D GLA + GQ T+
Sbjct: 294 YTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK---AGQTKTK 347
Query: 319 -VLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHV 369
GT G++APE + D ++ GV L E++ R P R GE V
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF---RARGEKV 396
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
Query: 259 IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTR 318
IA+ ALE LH + VIHRD K SNVL++ + K DFG++ + D + I
Sbjct: 141 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA- 197
Query: 319 VLGTTGYLAPEYA----STGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHV--LVS 372
G Y APE + + KSD++S G+ +EL R P D P + + +V
Sbjct: 198 --GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVE 255
Query: 373 WALPRLTSREEAVEMVD 389
P+L + + + E VD
Sbjct: 256 EPSPQLPADKFSAEFVD 272
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 35 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 92
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L +A F H H V+HRD K N+L++
Sbjct: 93 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--FCHSHR---VLHRDLKPQNLLINTEG 147
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + + T + T Y APE K +T D++S G + E++
Sbjct: 148 AIKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMV 205
Query: 354 TGR 356
T R
Sbjct: 206 TRR 208
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 196 AFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLD--- 252
FR E D+L S + L D N+ L+ +Y G L L + +R P +
Sbjct: 120 CFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRL-PEEMAR 178
Query: 253 -WRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFG-LAKMVSDK 310
+ ++IA+D L + +HRD K N+L+D N ++ DFG K++ D
Sbjct: 179 FYLAEMVIAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLMED- 228
Query: 311 INGQISTRV-LGTTGYLAPEY-----ASTGKLTTKSDVYSYGVVLLELLTGRVP 358
G + + V +GT Y++PE G+ + D +S GV + E+L G P
Sbjct: 229 --GTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 78/181 (43%), Gaps = 13/181 (7%)
Query: 182 AIKKLHRDG---KQRERAFRMEVD-LLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTL 237
A+K L + K+ E+ E + LL + P LV L + + +Y+ G L
Sbjct: 67 AVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL 126
Query: 238 QQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAK 297
HL R P R R A + A AL +LH +++RD K N+LLD
Sbjct: 127 FYHLQRERCFLEP---RARFYAA-EIASALGYLHSLN---IVYRDLKPENILLDSQGHIV 179
Query: 298 VTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRV 357
+TDFGL K + + ++ GT YLAPE D + G VL E+L G
Sbjct: 180 LTDFGLCK--ENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLP 237
Query: 358 P 358
P
Sbjct: 238 P 238
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 85
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLSFCHSHR---VLHRDLKPQNLLINTEG 140
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + + T + T Y APE K +T D++S G + E++
Sbjct: 141 AIKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 354 TGR 356
T R
Sbjct: 199 TRR 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 35 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 92
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 93 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 147
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + + T + T Y APE K +T D++S G + E++
Sbjct: 148 AIKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 205
Query: 354 TGR 356
T R
Sbjct: 206 TRR 208
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 32 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 89
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 90 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 144
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + + T + T Y APE K +T D++S G + E++
Sbjct: 145 AIKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 202
Query: 354 TGR 356
T R
Sbjct: 203 TRR 205
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 12/188 (6%)
Query: 182 AIKKLHRDGKQRERAFRM-EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQH 240
AIK L + ++ + M E ++ +L +P +V L+G C + +L+ E G L +
Sbjct: 367 AIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKF 425
Query: 241 LHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTD 300
L P+ L+ + +M +++L E +HR+ NVLL AK++D
Sbjct: 426 LVGKREEI-PVSNVAELLHQV--SMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISD 479
Query: 301 FGLAKMVSDKINGQISTRVLGT--TGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRV 357
FGL+K + + + R G + APE + K +++SDV+SYGV + E L+ G+
Sbjct: 480 FGLSKALGAD-DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQK 538
Query: 358 PVDPNRPP 365
P + P
Sbjct: 539 PYKKMKGP 546
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 27/198 (13%)
Query: 176 SDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLV-------ELLGYCADQNHRLLI 228
+ A+K L D +++ + DL+S + +++ LLG C +I
Sbjct: 65 KEAVTVAVKMLKDDATEKDLS-----DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 119
Query: 229 SEYMPNGTLQQHLHRHN----------NRY--RPLDWRTRLIIALDCAMALEFLHEHATP 276
Y G L+++L NR + ++ + A +E+L A+
Sbjct: 120 VGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQ 176
Query: 277 PVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
IHRD NVL+ +N K+ DFGLA+ +++ + +T ++APE
Sbjct: 177 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY 236
Query: 337 TTKSDVYSYGVVLLELLT 354
T +SDV+S+GV++ E+ T
Sbjct: 237 THQSDVWSFGVLMWEIFT 254
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 29 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 86
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 87 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 141
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + + T + T Y APE K +T D++S G + E++
Sbjct: 142 AIKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 354 TGR 356
T R
Sbjct: 200 TRR 202
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 17/182 (9%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTL 237
G +AA K + ++ + +E+++L+ P +V+LLG ++ E+ P G +
Sbjct: 36 GALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV 95
Query: 238 QQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAK 297
+ + R L ++ AL FLH + +IHRD K NVL+ +
Sbjct: 96 DAIMLELD---RGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIR 149
Query: 298 VTDFGLAKMVSDKINGQISTR--VLGTTGYLAPEYASTGKLTT-----KSDVYSYGVVLL 350
+ DFG VS K + R +GT ++APE + K+D++S G+ L+
Sbjct: 150 LADFG----VSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLI 205
Query: 351 EL 352
E+
Sbjct: 206 EM 207
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 17/182 (9%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTL 237
G +AA K + ++ + +E+++L+ P +V+LLG ++ E+ P G +
Sbjct: 44 GALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV 103
Query: 238 QQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAK 297
+ + R L ++ AL FLH + +IHRD K NVL+ +
Sbjct: 104 DAIMLELD---RGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIR 157
Query: 298 VTDFGLAKMVSDKINGQISTR--VLGTTGYLAPEYASTGKLTT-----KSDVYSYGVVLL 350
+ DFG VS K + R +GT ++APE + K+D++S G+ L+
Sbjct: 158 LADFG----VSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLI 213
Query: 351 EL 352
E+
Sbjct: 214 EM 215
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 85
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 140
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + + T + T Y APE K +T D++S G + E++
Sbjct: 141 AIKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 354 TGR 356
T R
Sbjct: 199 TRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 27 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 84
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 85 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 139
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + + T + T Y APE K +T D++S G + E++
Sbjct: 140 AIKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
Query: 354 TGR 356
T R
Sbjct: 198 TRR 200
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 85
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L +A F H H V+HRD K N+L++
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--FCHSHR---VLHRDLKPQNLLINTEG 140
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + + T + T Y APE K +T D++S G + E++
Sbjct: 141 AIKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMV 198
Query: 354 TGR 356
T R
Sbjct: 199 TRR 201
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 85
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 140
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + + T + T Y APE K +T D++S G + E++
Sbjct: 141 AIKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 354 TGR 356
T R
Sbjct: 199 TRR 201
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 27 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 84
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 85 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 139
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + + T + T Y APE K +T D++S G + E++
Sbjct: 140 AIKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
Query: 354 TGR 356
T R
Sbjct: 198 TRR 200
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 18/177 (10%)
Query: 191 KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQH------LHRH 244
K + F+ E+ +++ + + + G + + +I EYM N ++ + L ++
Sbjct: 84 KSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN 143
Query: 245 NNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLA 304
+ P+ ++I + ++ F + H + HRD K SN+L+D+N R K++DFG +
Sbjct: 144 YTCFIPI----QVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGES 199
Query: 305 K-MVSDKINGQISTRVLGTTGYLAPEYAS--TGKLTTKSDVYSYGVVLLELLTGRVP 358
+ MV KI G GT ++ PE+ S + K D++S G+ L + VP
Sbjct: 200 EYMVDKKIKGS-----RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 23/151 (15%)
Query: 237 LQQHLHRHNNRYRPLDWRT-------RLIIALDCAMA---LEFLHEHATPPVIHRDFKCS 286
L H H H + Y L +T RL ++ C +A +E P + HRDFK
Sbjct: 83 LITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSR 142
Query: 287 NVLLDQNFRAKVTDFGLAKM---VSDKINGQISTRVLGTTGYLAPEYASTGKLT------ 337
NVL+ N + + D GLA M SD ++ + RV GT Y+APE T
Sbjct: 143 NVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTKRYMAPEVLDEQIRTDCFESY 201
Query: 338 TKSDVYSYGVVLLELLTGRVP---VDPNRPP 365
+D++++G+VL E+ + V+ RPP
Sbjct: 202 KWTDIWAFGLVLWEIARRTIVNGIVEDYRPP 232
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 30 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 87
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 88 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPENLLINTEG 142
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + V T Y APE K +T D++S G + E++
Sbjct: 143 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
Query: 354 TGR 356
T R
Sbjct: 201 TRR 203
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 88
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 89 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 143
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + V T Y APE K +T D++S G + E++
Sbjct: 144 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 354 TGR 356
T R
Sbjct: 202 TRR 204
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-S 88
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 89 MDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPENLLINTEG 143
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + V T Y APE K +T D++S G + E++
Sbjct: 144 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 354 TGR 356
T R
Sbjct: 202 TRR 204
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 30 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 87
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 88 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 142
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + V T Y APE K +T D++S G + E++
Sbjct: 143 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
Query: 354 TGR 356
T R
Sbjct: 201 TRR 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 85
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 140
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + V T Y APE K +T D++S G + E++
Sbjct: 141 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 354 TGR 356
T R
Sbjct: 199 TRR 201
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 29 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 86
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 87 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPENLLINTEG 141
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + V T Y APE K +T D++S G + E++
Sbjct: 142 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 354 TGR 356
T R
Sbjct: 200 TRR 202
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 88
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 89 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 143
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + V T Y APE K +T D++S G + E++
Sbjct: 144 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 354 TGR 356
T R
Sbjct: 202 TRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 30 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 87
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 88 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 142
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + V T Y APE K +T D++S G + E++
Sbjct: 143 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
Query: 354 TGR 356
T R
Sbjct: 201 TRR 203
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 32 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 89
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 90 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 144
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + V T Y APE K +T D++S G + E++
Sbjct: 145 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 202
Query: 354 TGR 356
T R
Sbjct: 203 TRR 205
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 27 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 84
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 85 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 139
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + V T Y APE K +T D++S G + E++
Sbjct: 140 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
Query: 354 TGR 356
T R
Sbjct: 198 TRR 200
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 13/189 (6%)
Query: 175 LSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
LS+ AIK++ + + E+ L L +V+ LG ++ + E +P
Sbjct: 44 LSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG 103
Query: 235 GTLQQHLHRHNNRYRPL--DWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQ 292
G+L L +++ PL + +T L++LH++ ++HRD K NVL++
Sbjct: 104 GSLSALLR---SKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINT 157
Query: 293 -NFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTG--KLTTKSDVYSYGVVL 349
+ K++DFG +K ++ IN T GT Y+APE G +D++S G +
Sbjct: 158 YSGVLKISDFGTSKRLAG-INPCTET-FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTI 215
Query: 350 LELLTGRVP 358
+E+ TG+ P
Sbjct: 216 IEMATGKPP 224
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 85
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 140
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + V T Y APE K +T D++S G + E++
Sbjct: 141 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 354 TGR 356
T R
Sbjct: 199 TRR 201
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 29 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-S 86
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 87 MDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPENLLINTEG 141
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + V T Y APE K +T D++S G + E++
Sbjct: 142 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 354 TGR 356
T R
Sbjct: 200 TRR 202
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 29 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 86
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 87 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 141
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + V T Y APE K +T D++S G + E++
Sbjct: 142 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 354 TGR 356
T R
Sbjct: 200 TRR 202
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 85
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 140
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + V T Y APE K +T D++S G + E++
Sbjct: 141 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 354 TGR 356
T R
Sbjct: 199 TRR 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 29 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 86
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 87 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 141
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + V T Y APE K +T D++S G + E++
Sbjct: 142 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 354 TGR 356
T R
Sbjct: 200 TRR 202
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ +D++ G ++TR Y
Sbjct: 144 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WY 195
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 27 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 84
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 85 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 139
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + V T Y APE K +T D++S G + E++
Sbjct: 140 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
Query: 354 TGR 356
T R
Sbjct: 198 TRR 200
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 143 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 194
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ +D++ G ++TR Y
Sbjct: 144 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WY 195
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ +D++ G ++TR Y
Sbjct: 144 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WY 195
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 85
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 140
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + V T Y APE K +T D++S G + E++
Sbjct: 141 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 354 TGR 356
T R
Sbjct: 199 TRR 201
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 28/149 (18%)
Query: 226 LLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLH------EHATPPVI 279
LL+ EY PNG+L ++L H + DW + +A L +LH +H P +
Sbjct: 88 LLVMEYYPNGSLXKYLSLHTS-----DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAIS 142
Query: 280 HRDFKCSNVLLDQNFRAKVTDFGLAKMVS--------DKINGQISTRVLGTTGYLAPEYA 331
HRD NVL+ + ++DFGL+ ++ ++ N IS +GT Y+APE
Sbjct: 143 HRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE--VGTIRYMAPEVL 200
Query: 332 STG-------KLTTKSDVYSYGVVLLELL 353
+ D+Y+ G++ E+
Sbjct: 201 EGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 13/189 (6%)
Query: 175 LSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
LS+ AIK++ + + E+ L L +V+ LG ++ + E +P
Sbjct: 30 LSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG 89
Query: 235 GTLQQHLHRHNNRYRPL--DWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQ 292
G+L L +++ PL + +T L++LH++ ++HRD K NVL++
Sbjct: 90 GSLSALLR---SKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINT 143
Query: 293 -NFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTG--KLTTKSDVYSYGVVL 349
+ K++DFG +K ++ IN T GT Y+APE G +D++S G +
Sbjct: 144 YSGVLKISDFGTSKRLAG-INPCTET-FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTI 201
Query: 350 LELLTGRVP 358
+E+ TG+ P
Sbjct: 202 IEMATGKPP 210
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I++ MP G L ++ H + L+W
Sbjct: 69 EAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNW--- 124
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDK------ 310
+ A + +L + ++HRD NVL+ K+TDFG AK++ +
Sbjct: 125 ---CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 311 INGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 179 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 31/196 (15%)
Query: 182 AIKKLHRD-GKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRL-LISEYMPNGTLQQ 239
A+K + + G R R FR EV++L + + V L ++ R L+ E M G++
Sbjct: 42 AVKIIEKQPGHIRSRVFR-EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILS 100
Query: 240 HLH--RHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD---QNF 294
H+H RH N ++ D A AL+FLH + HRD K N+L + Q
Sbjct: 101 HIHKRRHFNELEA------SVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVS 151
Query: 295 RAKVTDFGLAKMVSDKINGQ---ISTRVL----GTTGYLAPE----YASTGKLTTK-SDV 342
K+ DF L + K+NG IST L G+ Y+APE ++ + K D+
Sbjct: 152 PVKICDFDLGSGI--KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDL 209
Query: 343 YSYGVVLLELLTGRVP 358
+S GV+L LL+G P
Sbjct: 210 WSLGVILYILLSGYPP 225
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I++ MP G L ++ H + L+W
Sbjct: 74 EAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNW--- 129
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDK------ 310
+ A + +L + ++HRD NVL+ K+TDFG AK++ +
Sbjct: 130 ---CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 183
Query: 311 INGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 184 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 143 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 194
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 12/143 (8%)
Query: 227 LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCS 286
I + M G L HL +H + D R A + + LE +H V++RD K +
Sbjct: 268 FILDLMNGGDLHYHLSQHGV-FSEADMR---FYAAEIILGLEHMHNRF---VVYRDLKPA 320
Query: 287 NVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTG-KLTTKSDVYSY 345
N+LLD++ +++D GLA S K +GT GY+APE G + +D +S
Sbjct: 321 NILLDEHGHVRISDLGLACDFSKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSL 376
Query: 346 GVVLLELLTGRVPVDPNRPPGEH 368
G +L +LL G P ++ +H
Sbjct: 377 GCMLFKLLRGHSPFRQHKTKDKH 399
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I++ MP G L ++ H + L+W
Sbjct: 67 EAYVMASVDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNW--- 122
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN---- 312
+ A + +L + ++HRD NVL+ K+TDFG AK++ +
Sbjct: 123 ---CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 176
Query: 313 --GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 177 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 12/143 (8%)
Query: 227 LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCS 286
I + M G L HL +H + D R A + + LE +H V++RD K +
Sbjct: 269 FILDLMNGGDLHYHLSQHGV-FSEADMR---FYAAEIILGLEHMHNRF---VVYRDLKPA 321
Query: 287 NVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTG-KLTTKSDVYSY 345
N+LLD++ +++D GLA S K +GT GY+APE G + +D +S
Sbjct: 322 NILLDEHGHVRISDLGLACDFSKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSL 377
Query: 346 GVVLLELLTGRVPVDPNRPPGEH 368
G +L +LL G P ++ +H
Sbjct: 378 GCMLFKLLRGHSPFRQHKTKDKH 400
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WY 193
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WY 193
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 82/183 (44%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-S 88
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L+ + PL + L L F H H V+HRD K N+L++
Sbjct: 89 MDLKDFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 143
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + V T Y APE K +T D++S G + E++
Sbjct: 144 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 354 TGR 356
T R
Sbjct: 202 TRR 204
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 82/183 (44%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 85
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L+ + PL + L L F H H V+HRD K N+L++
Sbjct: 86 QDLKDFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPENLLINTEG 140
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + V T Y APE K +T D++S G + E++
Sbjct: 141 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 354 TGR 356
T R
Sbjct: 199 TRR 201
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 17/170 (10%)
Query: 196 AFRMEVDLLSRLHS-PQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWR 254
A R E +L ++ P ++ L+ + L+ + M G L +L + +
Sbjct: 145 ATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL---TEKVALSEKE 201
Query: 255 TRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQ 314
TR I+ A+ FLH + ++HRD K N+LLD N + +++DFG + + G+
Sbjct: 202 TRSIMR-SLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEP---GE 254
Query: 315 ISTRVLGTTGYLAPEYASTGKLTT------KSDVYSYGVVLLELLTGRVP 358
+ GT GYLAPE T + D+++ GV+L LL G P
Sbjct: 255 KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR-----WY 188
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 148 GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WY 199
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 82/183 (44%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 88
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L+ + PL + L L F H H V+HRD K N+L++
Sbjct: 89 QDLKTFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 143
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + V T Y APE K +T D++S G + E++
Sbjct: 144 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 354 TGR 356
T R
Sbjct: 202 TRR 204
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 147 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 198
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 157 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR-----WY 208
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 82/183 (44%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 30 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-S 87
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L+ + PL + L L F H H V+HRD K N+L++
Sbjct: 88 MDLKDFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 142
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + V T Y APE K +T D++S G + E++
Sbjct: 143 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
Query: 354 TGR 356
T R
Sbjct: 201 TRR 203
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 157 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 208
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 139 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 190
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 156 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 207
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 143 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 194
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 193
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 12/143 (8%)
Query: 227 LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCS 286
I + M G L HL +H + D R A + + LE +H V++RD K +
Sbjct: 269 FILDLMNGGDLHYHLSQHGV-FSEADMR---FYAAEIILGLEHMHNRF---VVYRDLKPA 321
Query: 287 NVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTG-KLTTKSDVYSY 345
N+LLD++ +++D GLA S K +GT GY+APE G + +D +S
Sbjct: 322 NILLDEHGHVRISDLGLACDFSKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSL 377
Query: 346 GVVLLELLTGRVPVDPNRPPGEH 368
G +L +LL G P ++ +H
Sbjct: 378 GCMLFKLLRGHSPFRQHKTKDKH 400
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 12/143 (8%)
Query: 227 LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCS 286
I + M G L HL +H + D R A + + LE +H V++RD K +
Sbjct: 269 FILDLMNGGDLHYHLSQHGV-FSEADMR---FYAAEIILGLEHMHNRF---VVYRDLKPA 321
Query: 287 NVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTG-KLTTKSDVYSY 345
N+LLD++ +++D GLA S K +GT GY+APE G + +D +S
Sbjct: 322 NILLDEHGHVRISDLGLACDFSKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSL 377
Query: 346 GVVLLELLTGRVPVDPNRPPGEH 368
G +L +LL G P ++ +H
Sbjct: 378 GCMLFKLLRGHSPFRQHKTKDKH 400
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 136 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 187
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 188 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 10/107 (9%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKI------NGQIS--TRVLGTTGYLAPE 329
VIHRD K SN+L++ N KV DFGLA+++ + GQ S T + T Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 330 YAST-GKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWAL 375
T K + DV+S G +L EL R P+ P R +L+ + +
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRR-PIFPGRDYRHQLLLIFGI 238
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 160 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 211
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 156 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 207
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 144 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 195
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 149 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 200
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 157 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 208
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 149 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 200
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 10/107 (9%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKI------NGQIS--TRVLGTTGYLAPE 329
VIHRD K SN+L++ N KV DFGLA+++ + GQ S T + T Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 330 YAST-GKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWAL 375
T K + DV+S G +L EL R P+ P R +L+ + +
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRR-PIFPGRDYRHQLLLIFGI 238
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 149 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 200
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 139 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 190
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 139 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 190
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 133 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 184
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 133 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 184
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 193
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 166 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 217
Query: 326 LAPEYASTGK-LTTKSDVYSYGVVLLELLTGR 356
APE D++S G ++ ELLTGR
Sbjct: 218 RAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 148 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 199
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 84/190 (44%), Gaps = 30/190 (15%)
Query: 180 VAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
V I K K + + EV LL +L P + +L + D+ + L+ E G L
Sbjct: 56 VKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFD 115
Query: 240 HLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL-----DQNF 294
+ R+ +D R+I + + + H++ ++HRD K N+LL D N
Sbjct: 116 EIISRK-RFSEVD-AARIIRQV--LSGITYXHKN---KIVHRDLKPENLLLESKSKDANI 168
Query: 295 RAKVTDFGLA------KMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
R + DFGL+ K DKI GT Y+APE G K DV+S GV+
Sbjct: 169 R--IIDFGLSTHFEASKKXKDKI---------GTAYYIAPEVLH-GTYDEKCDVWSTGVI 216
Query: 349 LLELLTGRVP 358
L LL+G P
Sbjct: 217 LYILLSGCPP 226
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 134 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 185
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 133 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 184
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 143 GLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WY 194
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 135 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 186
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 29/191 (15%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCA------DQNHRLLI 228
G AIKKL+R + +RA+R E+ LL + ++ LL D L+
Sbjct: 50 GAKVAIKKLYRPFQSELFAKRAYR-ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLV 108
Query: 229 SEYMPN--GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCS 286
+M G L +H +R + + L ++H +IHRD K
Sbjct: 109 MPFMGTDLGKLMKHEKLGEDRIQ--------FLVYQMLKGLRYIHAAG---IIHRDLKPG 157
Query: 287 NVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYA-STGKLTTKSDVYSY 345
N+ ++++ K+ DFGLA+ ++ G + TR Y APE + + T D++S
Sbjct: 158 NLAVNEDCELKILDFGLARQADSEMXGXVVTR-----WYRAPEVILNWMRYTQTVDIWSV 212
Query: 346 GVVLLELLTGR 356
G ++ E++TG+
Sbjct: 213 GCIMAEMITGK 223
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 134 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 185
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-D 88
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 89 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 143
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + V T Y APE K +T D++S G + E++
Sbjct: 144 AIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 354 TGR 356
T R
Sbjct: 202 TRR 204
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 139 GLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WY 190
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 33/243 (13%)
Query: 171 YKGVLSD-GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELL------GYCADQN 223
Y+ L D G + AIKK+ +D + + R E+ ++ +L +V L G D+
Sbjct: 71 YQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 126
Query: 224 HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAM-----ALEFLHEHATPPV 278
+ L+ +Y+P + + RH +R + +T +I + M +L ++H +
Sbjct: 127 YLNLVLDYVPETVYR--VARHYSRAK----QTLPVIYVKLYMYQLFRSLAYIHSFG---I 177
Query: 279 IHRDFKCSNVLLDQNFRA-KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE--YASTGK 335
HRD K N+LLD + K+ DFG AK + + G+ + + + Y APE + +T
Sbjct: 178 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYYRAPELIFGAT-D 233
Query: 336 LTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQ 395
T+ DV+S G VL ELL G+ P+ P + ++ + +RE+ EM + +
Sbjct: 234 YTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 292
Query: 396 YPK 398
+P+
Sbjct: 293 FPQ 295
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS-DKINGQISTRVLGTTG 324
L+++H + V+HRD K SN+LL+ K+ DFGLA++ D + T + T
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 325 YLAPEYASTGKLTTKS-DVYSYGVVLLELLTGRVPVDPNRP--PGEHVL 370
Y APE K TKS D++S G +L E+L+ NRP PG+H L
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-------NRPIFPGKHYL 234
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 33/243 (13%)
Query: 171 YKGVLSD-GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELL------GYCADQN 223
Y+ L D G + AIKK+ +D + + R E+ ++ +L +V L G D+
Sbjct: 65 YQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 120
Query: 224 HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAM-----ALEFLHEHATPPV 278
+ L+ +Y+P + + RH +R + +T +I + M +L ++H +
Sbjct: 121 YLNLVLDYVPETVYR--VARHYSRAK----QTLPVIYVKLYMYQLFRSLAYIHSFG---I 171
Query: 279 IHRDFKCSNVLLDQNFRA-KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE--YASTGK 335
HRD K N+LLD + K+ DFG AK + + G+ + + + Y APE + +T
Sbjct: 172 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYYRAPELIFGAT-D 227
Query: 336 LTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQ 395
T+ DV+S G VL ELL G+ P+ P + ++ + +RE+ EM + +
Sbjct: 228 YTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 286
Query: 396 YPK 398
+P+
Sbjct: 287 FPQ 289
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS-DKINGQISTRVLGTTG 324
L+++H + V+HRD K SN+LL+ K+ DFGLA++ D + T + T
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 325 YLAPEYASTGKLTTKS-DVYSYGVVLLELLTGRVPVDPNRP--PGEHVL 370
Y APE K TKS D++S G +L E+L+ NRP PG+H L
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-------NRPIFPGKHYL 234
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 33/243 (13%)
Query: 171 YKGVLSD-GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELL------GYCADQN 223
Y+ L D G + AIKK+ +D + + R E+ ++ +L +V L G D+
Sbjct: 116 YQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 171
Query: 224 HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAM-----ALEFLHEHATPPV 278
+ L+ +Y+P + + RH +R + +T +I + M +L ++H +
Sbjct: 172 YLNLVLDYVPETVYR--VARHYSRAK----QTLPVIYVKLYMYQLFRSLAYIHSFG---I 222
Query: 279 IHRDFKCSNVLLDQNFRA-KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE--YASTGK 335
HRD K N+LLD + K+ DFG AK + + G+ + + + Y APE + +T
Sbjct: 223 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYYRAPELIFGAT-D 278
Query: 336 LTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQ 395
T+ DV+S G VL ELL G+ P+ P + ++ + +RE+ EM + +
Sbjct: 279 YTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 337
Query: 396 YPK 398
+P+
Sbjct: 338 FPQ 340
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 33/243 (13%)
Query: 171 YKGVLSD-GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELL------GYCADQN 223
Y+ L D G + AIKK+ +D + + R E+ ++ +L +V L G D+
Sbjct: 71 YQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 126
Query: 224 HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAM-----ALEFLHEHATPPV 278
+ L+ +Y+P + + RH +R + +T +I + M +L ++H +
Sbjct: 127 YLNLVLDYVPETVYR--VARHYSRAK----QTLPVIYVKLYMYQLFRSLAYIHSFG---I 177
Query: 279 IHRDFKCSNVLLDQNFRA-KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE--YASTGK 335
HRD K N+LLD + K+ DFG AK + + G+ + + + Y APE + +T
Sbjct: 178 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYYRAPELIFGAT-D 233
Query: 336 LTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQ 395
T+ DV+S G VL ELL G+ P+ P + ++ + +RE+ EM + +
Sbjct: 234 YTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 292
Query: 396 YPK 398
+P+
Sbjct: 293 FPQ 295
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 160 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----WY 211
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS-DKINGQISTRVLGTTG 324
L+++H + V+HRD K SN+LL+ K+ DFGLA++ D + T + T
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 325 YLAPEYASTGKLTTKS-DVYSYGVVLLELLTGRVPVDPNRP--PGEHVL 370
Y APE K TKS D++S G +L E+L+ NRP PG+H L
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-------NRPIFPGKHYL 238
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLT 337
+ HRD K N+LLD+ K++DFGLA + ++ ++ GT Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 338 TKS-DVYSYGVVLLELLTGRVPVD 360
+ DV+S G+VL +L G +P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLT 337
+ HRD K N+LLD+ K++DFGLA + ++ ++ GT Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 338 TKS-DVYSYGVVLLELLTGRVPVD 360
+ DV+S G+VL +L G +P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS-DKINGQISTRVLGTTG 324
L+++H + V+HRD K SN+LL+ K+ DFGLA++ D + T + T
Sbjct: 156 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 325 YLAPEYASTGKLTTKS-DVYSYGVVLLELLTGRVPVDPNRP--PGEHVL 370
Y APE K TKS D++S G +L E+L+ NRP PG+H L
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-------NRPIFPGKHYL 254
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS-DKINGQISTRVLGTTG 324
L+++H + V+HRD K SN+LL+ K+ DFGLA++ D + T + T
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 325 YLAPEYASTGKLTTKS-DVYSYGVVLLELLTGRVPVDPNRP--PGEHVL 370
Y APE K TKS D++S G +L E+L+ NRP PG+H L
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-------NRPIFPGKHYL 238
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLT 337
+ HRD K N+LLD+ K++DFGLA + ++ ++ GT Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 338 TKS-DVYSYGVVLLELLTGRVPVD 360
+ DV+S G+VL +L G +P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 33/243 (13%)
Query: 171 YKGVLSD-GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELL------GYCADQN 223
Y+ L D G + AIKK+ +D + + R E+ ++ +L +V L G D+
Sbjct: 75 YQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 130
Query: 224 HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAM-----ALEFLHEHATPPV 278
+ L+ +Y+P + + RH +R + +T +I + M +L ++H +
Sbjct: 131 YLNLVLDYVPETVYR--VARHYSRAK----QTLPVIYVKLYMYQLFRSLAYIHSFG---I 181
Query: 279 IHRDFKCSNVLLDQNFRA-KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE--YASTGK 335
HRD K N+LLD + K+ DFG AK + + G+ + + + Y APE + +T
Sbjct: 182 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYYRAPELIFGAT-D 237
Query: 336 LTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQ 395
T+ DV+S G VL ELL G+ P+ P + ++ + +RE+ EM + +
Sbjct: 238 YTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 296
Query: 396 YPK 398
+P+
Sbjct: 297 FPQ 299
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I + MP G L ++ H + L+W
Sbjct: 69 EAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNW--- 124
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN---- 312
+ A + +L + ++HRD NVL+ K+TDFG AK++ +
Sbjct: 125 ---CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 313 --GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 179 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 30/194 (15%)
Query: 177 DGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCAD--------------- 221
DG IK++ + ++ ER EV L++L +V G C D
Sbjct: 35 DGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVHYNG-CWDGFDYDPETSSKNSSR 89
Query: 222 -QNHRLLIS-EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVI 279
+ L I E+ GTL+Q + + R LD L + ++++H + +I
Sbjct: 90 SKTKCLFIQMEFCDKGTLEQWIEKR--RGEKLDKVLALELFEQITKGVDYIH---SKKLI 144
Query: 280 HRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTK 339
+RD K SN+ L + K+ DFGL + S K +G+ R GT Y++PE S+ +
Sbjct: 145 NRDLKPSNIFLVDTKQVKIGDFGL--VTSLKNDGK-RXRSKGTLRYMSPEQISSQDYGKE 201
Query: 340 SDVYSYGVVLLELL 353
D+Y+ G++L ELL
Sbjct: 202 VDLYALGLILAELL 215
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS-DKINGQISTRVLGTTG 324
L+++H + V+HRD K SN+LL+ K+ DFGLA++ D + T + T
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 325 YLAPEYASTGKLTTKS-DVYSYGVVLLELLTGRVPVDPNRP--PGEHVL 370
Y APE K TKS D++S G +L E+L+ NRP PG+H L
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-------NRPIFPGKHYL 234
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 177 DGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCAD--QNHRLLISEYMPN 234
+ V + K+ ++ R F E L P ++ +LG C H LI+ +MP
Sbjct: 34 NDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPY 93
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHR-DFKCSNVLLDQN 293
G+L LH N +D + ALD A + FL H P+I R +V++D++
Sbjct: 94 GSLYNVLHEGTNFV--VDQSQAVKFALDMARGMAFL--HTLEPLIPRHALNSRSVMIDED 149
Query: 294 FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTK---SDVYSYGVVLL 350
A+++ M K + Q R+ ++APE T +D++S+ V+L
Sbjct: 150 MTARIS------MADVKFSFQSPGRMYA-PAWVAPEALQKKPEDTNRRSADMWSFAVLLW 202
Query: 351 ELLTGRVP 358
EL+T VP
Sbjct: 203 ELVTREVP 210
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 33/243 (13%)
Query: 171 YKGVLSD-GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELL------GYCADQN 223
Y+ L D G + AIKK+ +D + + R E+ ++ +L +V L G D+
Sbjct: 73 YQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 128
Query: 224 HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAM-----ALEFLHEHATPPV 278
+ L+ +Y+P + + RH +R + +T +I + M +L ++H +
Sbjct: 129 YLNLVLDYVPETVYR--VARHYSRAK----QTLPVIYVKLYMYQLFRSLAYIHSFG---I 179
Query: 279 IHRDFKCSNVLLDQNFRA-KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE--YASTGK 335
HRD K N+LLD + K+ DFG AK + + G+ + + + Y APE + +T
Sbjct: 180 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYYRAPELIFGAT-D 235
Query: 336 LTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQ 395
T+ DV+S G VL ELL G+ P+ P + ++ + +RE+ EM + +
Sbjct: 236 YTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 294
Query: 396 YPK 398
+P+
Sbjct: 295 FPQ 297
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS-DKINGQISTRVLGTTG 324
L+++H + V+HRD K SN+LL+ K+ DFGLA++ D + T + T
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 325 YLAPEYASTGKLTTKS-DVYSYGVVLLELLTGRVPVDPNRP--PGEHVL 370
Y APE K TKS D++S G +L E+L+ NRP PG+H L
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-------NRPIFPGKHYL 234
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLT 337
+ HRD K N+LLD+ K++DFGLA + ++ ++ GT Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 338 TKS-DVYSYGVVLLELLTGRVPVD 360
+ DV+S G+VL +L G +P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLT 337
+ HRD K N+LLD+ K++DFGLA + ++ ++ GT Y+APE +
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 338 TKS-DVYSYGVVLLELLTGRVPVD 360
+ DV+S G+VL +L G +P D
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I + MP G L ++ H + L+W
Sbjct: 69 EAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNW--- 124
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN---- 312
+ A + +L + ++HRD NVL+ K+TDFG AK++ +
Sbjct: 125 ---CVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 313 --GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 179 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLT 337
+ HRD K N+LLD+ K++DFGLA + ++ ++ GT Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 338 TKS-DVYSYGVVLLELLTGRVPVD 360
+ DV+S G+VL +L G +P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS-DKINGQISTRVLGTTG 324
L+++H + V+HRD K SN+LL+ K+ DFGLA++ D + T + T
Sbjct: 134 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 325 YLAPEYASTGKLTTKS-DVYSYGVVLLELLTGRVPVDPNRP--PGEHVL 370
Y APE K TKS D++S G +L E+L+ NRP PG+H L
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-------NRPIFPGKHYL 232
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS-DKINGQISTRVLGTTG 324
L+++H + V+HRD K SN+LL+ K+ DFGLA++ D + T + T
Sbjct: 138 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 325 YLAPEYASTGKLTTKS-DVYSYGVVLLELLTGRVPVDPNRP--PGEHVL 370
Y APE K TKS D++S G +L E+L+ NRP PG+H L
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-------NRPIFPGKHYL 236
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLT 337
+ HRD K N+LLD+ K++DFGLA + ++ ++ GT Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 338 TKS-DVYSYGVVLLELLTGRVPVD 360
+ DV+S G+VL +L G +P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS-DKINGQISTRVLGTTG 324
L+++H + V+HRD K SN+LL+ K+ DFGLA++ D + T + T
Sbjct: 141 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
Query: 325 YLAPEYASTGKLTTKS-DVYSYGVVLLELLTGRVPVDPNRP--PGEHVL 370
Y APE K TKS D++S G +L E+L+ NRP PG+H L
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-------NRPIFPGKHYL 239
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS-DKINGQISTRVLGTTG 324
L+++H + V+HRD K SN+LL+ K+ DFGLA++ D + T + T
Sbjct: 142 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
Query: 325 YLAPEYASTGKLTTKS-DVYSYGVVLLELLTGRVPVDPNRP--PGEHVL 370
Y APE K TKS D++S G +L E+L+ NRP PG+H L
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-------NRPIFPGKHYL 240
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS-DKINGQISTRVLGTTG 324
L+++H + V+HRD K SN+LL+ K+ DFGLA++ D + T + T
Sbjct: 133 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
Query: 325 YLAPEYASTGKLTTKS-DVYSYGVVLLELLTGRVPVDPNRP--PGEHVL 370
Y APE K TKS D++S G +L E+L+ NRP PG+H L
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-------NRPIFPGKHYL 231
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLT 337
+ HRD K N+LLD+ K++DFGLA + ++ ++ GT Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 338 TKS-DVYSYGVVLLELLTGRVPVD 360
+ DV+S G+VL +L G +P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS-DKINGQISTRVLGTTG 324
L+++H + V+HRD K SN+LL+ K+ DFGLA++ D + T + T
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 325 YLAPEYASTGKLTTKS-DVYSYGVVLLELLTGRVPVDPNRP--PGEHVL 370
Y APE K TKS D++S G +L E+L+ NRP PG+H L
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-------NRPIFPGKHYL 238
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS-DKINGQISTRVLGTTG 324
L+++H + V+HRD K SN+LL+ K+ DFGLA++ D + T + T
Sbjct: 134 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 325 YLAPEYASTGKLTTKS-DVYSYGVVLLELLTGRVPVDPNRP--PGEHVL 370
Y APE K TKS D++S G +L E+L+ NRP PG+H L
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-------NRPIFPGKHYL 232
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS-DKINGQISTRVLGTTG 324
L+++H + V+HRD K SN+LL+ K+ DFGLA++ D + T + T
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 325 YLAPEYASTGKLTTKS-DVYSYGVVLLELLTGRVPVDPNRP--PGEHVL 370
Y APE K TKS D++S G +L E+L+ NRP PG+H L
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-------NRPIFPGKHYL 238
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS-DKINGQISTRVLGTTG 324
L+++H + V+HRD K SN+LL+ K+ DFGLA++ D + T + T
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 325 YLAPEYASTGKLTTKS-DVYSYGVVLLELLTGRVPVDPNRP--PGEHVL 370
Y APE K TKS D++S G +L E+L+ NRP PG+H L
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-------NRPIFPGKHYL 238
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLT 337
+ HRD K N+LLD+ K++DFGLA + ++ ++ GT Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 338 TKS-DVYSYGVVLLELLTGRVPVD 360
+ DV+S G+VL +L G +P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLT 337
+ HRD K N+LLD+ K++DFGLA + ++ ++ GT Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 338 TKS-DVYSYGVVLLELLTGRVPVD 360
+ DV+S G+VL +L G +P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS-DKINGQISTRVLGTTG 324
L+++H + V+HRD K SN+LL+ K+ DFGLA++ D + T + T
Sbjct: 144 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
Query: 325 YLAPEYASTGKLTTKS-DVYSYGVVLLELLTGRVPVDPNRP--PGEHVL 370
Y APE K TKS D++S G +L E+L+ NRP PG+H L
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-------NRPIFPGKHYL 242
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS-DKINGQISTRVLGTTG 324
L+++H + V+HRD K SN+LL+ K+ DFGLA++ D + T + T
Sbjct: 136 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 325 YLAPEYASTGKLTTKS-DVYSYGVVLLELLTGRVPVDPNRP--PGEHVL 370
Y APE K TKS D++S G +L E+L+ NRP PG+H L
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-------NRPIFPGKHYL 234
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS-DKINGQISTRVLGTTG 324
L+++H + V+HRD K SN+LL+ K+ DFGLA++ D + T + T
Sbjct: 138 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 325 YLAPEYASTGKLTTKS-DVYSYGVVLLELLTGRVPVDPNRP--PGEHVL 370
Y APE K TKS D++S G +L E+L+ NRP PG+H L
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-------NRPIFPGKHYL 236
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLT 337
+ HRD K N+LLD+ K++DFGLA + ++ ++ GT Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 338 TKS-DVYSYGVVLLELLTGRVPVD 360
+ DV+S G+VL +L G +P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLT 337
+ HRD K N+LLD+ K++DFGLA + ++ ++ GT Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 338 TKS-DVYSYGVVLLELLTGRVPVD 360
+ DV+S G+VL +L G +P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLT 337
+ HRD K N+LLD+ K++DFGLA + ++ ++ GT Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 338 TKS-DVYSYGVVLLELLTGRVPVD 360
+ DV+S G+VL +L G +P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLT 337
+ HRD K N+LLD+ K++DFGLA + ++ ++ GT Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 338 TKS-DVYSYGVVLLELLTGRVPVD 360
+ DV+S G+VL +L G +P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLT 337
+ HRD K N+LLD+ K++DFGLA + ++ ++ GT Y+APE +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 338 TKS-DVYSYGVVLLELLTGRVPVD 360
+ DV+S G+VL +L G +P D
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 33/243 (13%)
Query: 171 YKGVLSD-GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELL------GYCADQN 223
Y+ L D G + AIKK+ +D + + R E+ ++ +L +V L G D+
Sbjct: 50 YQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 105
Query: 224 HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAM-----ALEFLHEHATPPV 278
+ L+ +Y+P + + RH +R + +T +I + M +L ++H +
Sbjct: 106 YLNLVLDYVPETVYR--VARHYSRAK----QTLPVIYVKLYMYQLFRSLAYIHSFG---I 156
Query: 279 IHRDFKCSNVLLDQNFRA-KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE--YASTGK 335
HRD K N+LLD + K+ DFG AK + + G+ + + + Y APE + +T
Sbjct: 157 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYYRAPELIFGAT-D 212
Query: 336 LTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQ 395
T+ DV+S G VL ELL G+ P+ P + ++ + +RE+ EM + +
Sbjct: 213 YTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 271
Query: 396 YPK 398
+P+
Sbjct: 272 FPQ 274
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLT 337
+ HRD K N+LLD+ K++DFGLA + ++ ++ GT Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 338 TKS-DVYSYGVVLLELLTGRVPVD 360
+ DV+S G+VL +L G +P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLT 337
+ HRD K N+LLD+ K++DFGLA + ++ ++ GT Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 338 TKS-DVYSYGVVLLELLTGRVPVD 360
+ DV+S G+VL +L G +P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLT 337
+ HRD K N+LLD+ K++DFGLA + ++ ++ GT Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 338 TKS-DVYSYGVVLLELLTGRVPVD 360
+ DV+S G+VL +L G +P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLT 337
+ HRD K N+LLD+ K++DFGLA + ++ ++ GT Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 338 TKS-DVYSYGVVLLELLTGRVPVD 360
+ DV+S G+VL +L G +P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+ K+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 28 GEVVALXKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 85
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 86 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 140
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + + T + T Y APE K +T D++S G + E++
Sbjct: 141 AIKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 354 TGR 356
T R
Sbjct: 199 TRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+ K+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 27 GEVVALXKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-H 84
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L++ + PL + L L F H H V+HRD K N+L++
Sbjct: 85 QDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 139
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + + T + T Y APE K +T D++S G + E++
Sbjct: 140 AIKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
Query: 354 TGR 356
T R
Sbjct: 198 TRR 200
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 33/243 (13%)
Query: 171 YKGVLSD-GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELL------GYCADQN 223
Y+ L D G + AIKK+ +D + + R E+ ++ +L +V L G D+
Sbjct: 45 YQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 100
Query: 224 HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAM-----ALEFLHEHATPPV 278
+ L+ +Y+P + + RH +R + +T +I + M +L ++H +
Sbjct: 101 YLNLVLDYVPETVYR--VARHYSRAK----QTLPVIYVKLYMYQLFRSLAYIHSFG---I 151
Query: 279 IHRDFKCSNVLLDQNFRA-KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE--YASTGK 335
HRD K N+LLD + K+ DFG AK + + G+ + + + Y APE + +T
Sbjct: 152 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYYRAPELIFGAT-D 207
Query: 336 LTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQ 395
T+ DV+S G VL ELL G+ P+ P + ++ + +RE+ EM + +
Sbjct: 208 YTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 266
Query: 396 YPK 398
+P+
Sbjct: 267 FPQ 269
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS-DKINGQISTRVLGTTG 324
L+++H + V+HRD K SN+LL+ K+ DFGLA++ D + T + T
Sbjct: 156 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 325 YLAPEYASTGKLTTKS-DVYSYGVVLLELLTGRVPVDPNRP--PGEHVL 370
Y APE K TKS D++S G +L E+L+ NRP PG+H L
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-------NRPIFPGKHYL 254
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 26/171 (15%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRP---LDWRTR 256
E +++ + +P + LLG C +L I + MP G L ++ H + L+W +
Sbjct: 71 EAYVMASVDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ 129
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKIN---- 312
+ A + +L + ++HRD NVL+ K+TDFG AK++ +
Sbjct: 130 I------AKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 180
Query: 313 --GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT-GRVPVD 360
G++ + + L Y T +SDV+SYGV + EL+T G P D
Sbjct: 181 EGGKVPIKWMALESILHRIY------THQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLT 337
+ HRD K N+LLD+ K++DFGLA + ++ ++ GT Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 338 TKS-DVYSYGVVLLELLTGRVPVD 360
+ DV+S G+VL +L G +P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 33/243 (13%)
Query: 171 YKGVLSD-GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELL------GYCADQN 223
Y+ L D G + AIKK+ +D + + R E+ ++ +L +V L G D+
Sbjct: 56 YQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 111
Query: 224 HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAM-----ALEFLHEHATPPV 278
+ L+ +Y+P + + RH +R + +T +I + M +L ++H +
Sbjct: 112 YLNLVLDYVPETVYR--VARHYSRAK----QTLPVIYVKLYMYQLFRSLAYIHSFG---I 162
Query: 279 IHRDFKCSNVLLDQNFRA-KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE--YASTGK 335
HRD K N+LLD + K+ DFG AK + + G+ + + + Y APE + +T
Sbjct: 163 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYYRAPELIFGAT-D 218
Query: 336 LTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQ 395
T+ DV+S G VL ELL G+ P+ P + ++ + +RE+ EM + +
Sbjct: 219 YTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 277
Query: 396 YPK 398
+P+
Sbjct: 278 FPQ 280
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLT 337
+ HRD K N+LLD+ K++DFGLA + ++ ++ GT Y+APE +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 338 TKS-DVYSYGVVLLELLTGRVPVD 360
+ DV+S G+VL +L G +P D
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 33/243 (13%)
Query: 171 YKGVLSD-GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELL------GYCADQN 223
Y+ L D G + AIKK+ +D + + R E+ ++ +L +V L G D+
Sbjct: 49 YQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 104
Query: 224 HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAM-----ALEFLHEHATPPV 278
+ L+ +Y+P + + RH +R + +T +I + M +L ++H +
Sbjct: 105 YLNLVLDYVPETVYR--VARHYSRAK----QTLPVIYVKLYMYQLFRSLAYIHSFG---I 155
Query: 279 IHRDFKCSNVLLDQNFRA-KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE--YASTGK 335
HRD K N+LLD + K+ DFG AK + + G+ + + + Y APE + +T
Sbjct: 156 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYYRAPELIFGAT-D 211
Query: 336 LTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQ 395
T+ DV+S G VL ELL G+ P+ P + ++ + +RE+ EM + +
Sbjct: 212 YTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 270
Query: 396 YPK 398
+P+
Sbjct: 271 FPQ 273
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 33/243 (13%)
Query: 171 YKGVLSD-GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELL------GYCADQN 223
Y+ L D G + AIKK+ +D + + R E+ ++ +L +V L G D+
Sbjct: 42 YQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 97
Query: 224 HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAM-----ALEFLHEHATPPV 278
+ L+ +Y+P + + RH +R + +T +I + M +L ++H +
Sbjct: 98 YLNLVLDYVPETVYR--VARHYSRAK----QTLPVIYVKLYMYQLFRSLAYIHSFG---I 148
Query: 279 IHRDFKCSNVLLDQNFRA-KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE--YASTGK 335
HRD K N+LLD + K+ DFG AK + + G+ + + + Y APE + +T
Sbjct: 149 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYYRAPELIFGAT-D 204
Query: 336 LTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQ 395
T+ DV+S G VL ELL G+ P+ P + ++ + +RE+ EM + +
Sbjct: 205 YTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 263
Query: 396 YPK 398
+P+
Sbjct: 264 FPQ 266
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 33/243 (13%)
Query: 171 YKGVLSD-GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELL------GYCADQN 223
Y+ L D G + AIKK+ +D + + R E+ ++ +L +V L G D+
Sbjct: 49 YQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 104
Query: 224 HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAM-----ALEFLHEHATPPV 278
+ L+ +Y+P + + RH +R + +T +I + M +L ++H +
Sbjct: 105 YLNLVLDYVPETVYR--VARHYSRAK----QTLPVIYVKLYMYQLFRSLAYIHSFG---I 155
Query: 279 IHRDFKCSNVLLDQNFRA-KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE--YASTGK 335
HRD K N+LLD + K+ DFG AK + + G+ + + + Y APE + +T
Sbjct: 156 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYYRAPELIFGAT-D 211
Query: 336 LTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQ 395
T+ DV+S G VL ELL G+ P+ P + ++ + +RE+ EM + +
Sbjct: 212 YTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 270
Query: 396 YPK 398
+P+
Sbjct: 271 FPQ 273
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WY 188
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 10/107 (9%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKI------NGQISTRV--LGTTGYLAPE 329
VIHRD K SN+L++ N KV DFGLA+++ + GQ S V + T Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 330 YAST-GKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWAL 375
T K + DV+S G +L EL R P+ P R +L+ + +
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRR-PIFPGRDYRHQLLLIFGI 238
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WY 188
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 84/183 (45%), Gaps = 13/183 (7%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+KK+ D + A R E+ LL L+ P +V+LL +N L+ E++ +
Sbjct: 27 GEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-H 84
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
L+ + PL + L L F H H V+HRD K N+L++
Sbjct: 85 QDLKTFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSHR---VLHRDLKPQNLLINTEG 139
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELL 353
K+ DFGLA+ + + T + T Y APE K +T D++S G + E++
Sbjct: 140 AIKLADFGLARAFGVPV--RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
Query: 354 TGR 356
T R
Sbjct: 198 TRR 200
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS-DKINGQISTRVLGTTG 324
L+++H + V+HRD K SN+LL+ K+ DFGLA++ D + T + T
Sbjct: 138 GLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 325 YLAPEYASTGKLTTKS-DVYSYGVVLLELLTGRVPVDPNRP--PGEHVL 370
Y APE K TKS D++S G +L E+L+ NRP PG+H L
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-------NRPIFPGKHYL 236
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGLA+ D++ G ++TR Y
Sbjct: 133 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WY 184
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 33/243 (13%)
Query: 171 YKGVLSD-GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELL------GYCADQN 223
Y+ L D G + AIKK+ +D + + R E+ ++ +L +V L G D+
Sbjct: 37 YQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 92
Query: 224 HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAM-----ALEFLHEHATPPV 278
+ L+ +Y+P + + RH +R + +T +I + M +L ++H +
Sbjct: 93 YLNLVLDYVPETVYR--VARHYSRAK----QTLPVIYVKLYMYQLFRSLAYIHSFG---I 143
Query: 279 IHRDFKCSNVLLDQNFRA-KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE--YASTGK 335
HRD K N+LLD + K+ DFG AK + + G+ + + + Y APE + +T
Sbjct: 144 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYYRAPELIFGAT-D 199
Query: 336 LTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQ 395
T+ DV+S G VL ELL G+ P+ P + ++ + +RE+ EM + +
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 258
Query: 396 YPK 398
+P+
Sbjct: 259 FPQ 261
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 33/243 (13%)
Query: 171 YKGVLSD-GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELL------GYCADQN 223
Y+ L D G + AIKK+ +D + + R E+ ++ +L +V L G D+
Sbjct: 37 YQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 92
Query: 224 HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAM-----ALEFLHEHATPPV 278
+ L+ +Y+P + + RH +R + +T +I + M +L ++H +
Sbjct: 93 YLNLVLDYVPETVYR--VARHYSRAK----QTLPVIYVKLYMYQLFRSLAYIHSFG---I 143
Query: 279 IHRDFKCSNVLLDQNFRA-KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE--YASTGK 335
HRD K N+LLD + K+ DFG AK + + G+ + + + Y APE + +T
Sbjct: 144 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYYRAPELIFGAT-D 199
Query: 336 LTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQ 395
T+ DV+S G VL ELL G+ P+ P + ++ + +RE+ EM + +
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 258
Query: 396 YPK 398
+P+
Sbjct: 259 FPQ 261
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 33/243 (13%)
Query: 171 YKGVLSD-GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELL------GYCADQN 223
Y+ L D G + AIKK+ +D + + R E+ ++ +L +V L G D+
Sbjct: 41 YQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 96
Query: 224 HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAM-----ALEFLHEHATPPV 278
+ L+ +Y+P + + RH +R + +T +I + M +L ++H +
Sbjct: 97 YLNLVLDYVPETVYR--VARHYSRAK----QTLPVIYVKLYMYQLFRSLAYIHSFG---I 147
Query: 279 IHRDFKCSNVLLDQNFRA-KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE--YASTGK 335
HRD K N+LLD + K+ DFG AK + + G+ + + + Y APE + +T
Sbjct: 148 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYYRAPELIFGAT-D 203
Query: 336 LTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQ 395
T+ DV+S G VL ELL G+ P+ P + ++ + +RE+ EM + +
Sbjct: 204 YTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 262
Query: 396 YPK 398
+P+
Sbjct: 263 FPQ 265
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 33/243 (13%)
Query: 171 YKGVLSD-GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELL------GYCADQN 223
Y+ L D G + AIKK+ +D + + R E+ ++ +L +V L G D+
Sbjct: 37 YQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 92
Query: 224 HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAM-----ALEFLHEHATPPV 278
+ L+ +Y+P + + RH +R + +T +I + M +L ++H +
Sbjct: 93 YLNLVLDYVPETVYR--VARHYSRAK----QTLPVIYVKLYMYQLFRSLAYIHSFG---I 143
Query: 279 IHRDFKCSNVLLDQNFRA-KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE--YASTGK 335
HRD K N+LLD + K+ DFG AK + + G+ + + + Y APE + +T
Sbjct: 144 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYYRAPELIFGAT-D 199
Query: 336 LTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQ 395
T+ DV+S G VL ELL G+ P+ P + ++ + +RE+ EM + +
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 258
Query: 396 YPK 398
+P+
Sbjct: 259 FPQ 261
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ D+GLA+ D++ G ++TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----WY 188
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 117/243 (48%), Gaps = 33/243 (13%)
Query: 171 YKGVLSD-GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELL------GYCADQN 223
Y+ L D G + AIKK+ +D + + R E+ ++ +L +V L G D+
Sbjct: 38 YQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 93
Query: 224 HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAM-----ALEFLHEHATPPV 278
+ L+ +Y+P + + RH +R + +T +I + M +L ++H +
Sbjct: 94 YLNLVLDYVPETVYR--VARHYSRAK----QTLPVIYVKLYMYQLFRSLAYIHSFG---I 144
Query: 279 IHRDFKCSNVLLDQNFRA-KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE--YASTGK 335
HRD K N+LLD + K+ DFG AK + + G+ + + + Y APE + +T
Sbjct: 145 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYYRAPELIFGAT-D 200
Query: 336 LTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQ 395
T+ DV+S G VL ELL G+ P+ P + ++ + +RE+ EM + +
Sbjct: 201 YTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 259
Query: 396 YPK 398
+P+
Sbjct: 260 FPQ 262
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 64/139 (46%), Gaps = 23/139 (16%)
Query: 230 EYMPNGTLQQHLHRHN-NRYRPLDWRT-RLIIALDCAMALEFLHEHATPPVIHRDFKCSN 287
EY N TL +H N N+ R WR R I+ AL ++H +IHR+ K N
Sbjct: 95 EYCENRTLYDLIHSENLNQQRDEYWRLFRQILE-----ALSYIHSQG---IIHRNLKPXN 146
Query: 288 VLLDQNFRAKVTDFGLAKMV----------SDKINGQIS--TRVLGTTGYLAPEYA-STG 334
+ +D++ K+ DFGLAK V S + G T +GT Y+A E TG
Sbjct: 147 IFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTG 206
Query: 335 KLTTKSDVYSYGVVLLELL 353
K D YS G++ E +
Sbjct: 207 HYNEKIDXYSLGIIFFEXI 225
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 67/158 (42%), Gaps = 23/158 (14%)
Query: 227 LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHA-------TPPVI 279
LI+ + G+L L + + W IA A L +LHE P +
Sbjct: 99 LITAFHEKGSLSDFL-----KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAIS 153
Query: 280 HRDFKCSNVLLDQNFRAKVTDFGLA-KMVSDKINGQISTRVLGTTGYLAPEYASTG---- 334
HRD K NVLL N A + DFGLA K + K G +V GT Y+APE
Sbjct: 154 HRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQV-GTRRYMAPEVLEGAINFQ 212
Query: 335 -KLTTKSDVYSYGVVLLELLT----GRVPVDPNRPPGE 367
+ D+Y+ G+VL EL + PVD P E
Sbjct: 213 RDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFE 250
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 200 EVDLLSRL-HSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLI 258
E+++L R P ++ L D + +++E M G L + R + R
Sbjct: 65 EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQ----KFFSEREASA 120
Query: 259 IALDCAMALEFLHEHATPPVIHRDFKCSNVL-LDQNFR---AKVTDFGLAKMVSDKINGQ 314
+ +E+LH V+HRD K SN+L +D++ ++ DFG AK + + NG
Sbjct: 121 VLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE-NGL 176
Query: 315 ISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPV--DPNRPPGE 367
+ T T ++APE D++S GV+L +LTG P P+ P E
Sbjct: 177 LMTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEE 230
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 21/197 (10%)
Query: 177 DGTV--AAIKKLHRD-GKQRE-RAFRMEVDLLSRLHSPQLVELLGYCADQNHR-----LL 227
DGT A+K + D QRE F E + P ++ LLG C + + + ++
Sbjct: 59 DGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMV 118
Query: 228 ISEYMPNGTLQQHL--HRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKC 285
I +M G L +L R + + +T L +D A+ +E+L +HRD
Sbjct: 119 ILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAA 175
Query: 286 SNVLLDQNFRAKVTDFGLAKMVSDKI---NGQISTRVLGTTGYLAPEYASTGKLTTKSDV 342
N +L + V DFGL+K + G+I+ ++A E + T+KSDV
Sbjct: 176 RNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKM---PVKWIAIESLADRVYTSKSDV 232
Query: 343 YSYGVVLLELLT-GRVP 358
+++GV + E+ T G P
Sbjct: 233 WAFGVTMWEIATRGMTP 249
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 87/213 (40%), Gaps = 19/213 (8%)
Query: 175 LSDGTVAAIKK-LHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYC----ADQNHRLLIS 229
L DG A+K+ L + + RE A R E D+ + P ++ L+ YC ++ L+
Sbjct: 51 LHDGHFYALKRILCHEQQDREEAQR-EADMHRLFNHPNILRLVAYCLRERGAKHEAWLLL 109
Query: 230 EYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL 289
+ GTL + R ++ L L + L LE +H HRD K +N+L
Sbjct: 110 PFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYA---HRDLKPTNIL 166
Query: 290 LDQNFRAKVTDFGLAKMVSDKINGQISTRVL-------GTTGYLAPEYASTGK---LTTK 339
L + + D G + G L T Y APE S + +
Sbjct: 167 LGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDER 226
Query: 340 SDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVS 372
+DV+S G VL ++ G P D G+ V ++
Sbjct: 227 TDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA 259
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQN--HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRL 257
E+ +L +L P +V+L+ D N H ++ E + G + + +PL
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-----VPTLKPLSEDQAR 140
Query: 258 IIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQ--I 315
D +E+LH +IHRD K SN+L+ ++ K+ DFG VS++ G +
Sbjct: 141 FYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFG----VSNEFKGSDAL 193
Query: 316 STRVLGTTGYLAPEYAS-TGKLTTKS--DVYSYGVVLLELLTGRVPVDPNR 363
+ +GT ++APE S T K+ + DV++ GV L + G+ P R
Sbjct: 194 LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 47/197 (23%)
Query: 237 LQQHLHRHNNRYRPLDWRTR------------LIIALDCAMALEFLHEHATPPVIHRDFK 284
+Q L R N DW R L I + A A+EFLH ++HRD K
Sbjct: 138 IQMQLCRKENLK---DWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LMHRDLK 191
Query: 285 CSNVLLDQNFRAKVTDFGLAK-MVSDKINGQISTRV---------LGTTGYLAPEYASTG 334
SN+ + KV DFGL M D+ + T + +GT Y++PE
Sbjct: 192 PSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGN 251
Query: 335 KLTTKSDVYSYGVVLLELLTG--------RVPVD----------PNRPPGEHVLVSWAL- 375
+ K D++S G++L ELL R+ D + P EH++V L
Sbjct: 252 NYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLS 311
Query: 376 PRLTSREEAVEMVDPSL 392
P T R EA ++++ ++
Sbjct: 312 PSPTERPEATDIIENAI 328
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DFGL + D++ G ++TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----WY 188
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 21/168 (12%)
Query: 200 EVDLLSRLHS-PQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLI 258
EVD+L ++ P +++L L+ + M G L +L + + TR I
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKI 129
Query: 259 I--ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIS 316
+ L+ AL L+ ++HRD K N+LLD + K+TDFG + + G+
Sbjct: 130 MRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP---GEKL 180
Query: 317 TRVLGTTGYLAPEYASTGK------LTTKSDVYSYGVVLLELLTGRVP 358
V GT YLAPE + D++S GV++ LL G P
Sbjct: 181 REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 16/185 (8%)
Query: 189 DGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRY 248
D +R+ + +E+ LL P ++ L D H L++E M G L + R
Sbjct: 61 DKSKRDPSEEIEI-LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ---- 115
Query: 249 RPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL-LDQNFR---AKVTDFGLA 304
+ R + +E+LH V+HRD K SN+L +D++ ++ DFG A
Sbjct: 116 KFFSEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFA 172
Query: 305 KMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPV--DPN 362
K + + NG + T T ++APE D++S G++L +L G P P+
Sbjct: 173 KQLRAE-NGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPS 230
Query: 363 RPPGE 367
P E
Sbjct: 231 DTPEE 235
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 21/168 (12%)
Query: 200 EVDLLSRLHS-PQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLI 258
EVD+L ++ P +++L L+ + M G L +L + + TR I
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKI 129
Query: 259 I--ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIS 316
+ L+ AL L+ ++HRD K N+LLD + K+TDFG + + G+
Sbjct: 130 MRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP---GEKL 180
Query: 317 TRVLGTTGYLAPEYASTGK------LTTKSDVYSYGVVLLELLTGRVP 358
V GT YLAPE + D++S GV++ LL G P
Sbjct: 181 RSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 14/109 (12%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS-DKINGQISTRVLGTTG 324
L+++H + V+HRD K SN+LL+ K+ DFGLA++ D + + T
Sbjct: 140 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
Query: 325 YLAPEYASTGKLTTKS-DVYSYGVVLLELLTGRVPVDPNRP--PGEHVL 370
Y APE K TKS D++S G +L E+L+ NRP PG+H L
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-------NRPIFPGKHYL 238
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 14/109 (12%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS-DKINGQISTRVLGTTG 324
L+++H + V+HRD K SN+LL+ K+ DFGLA++ D + + T
Sbjct: 141 GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
Query: 325 YLAPEYASTGKLTTKS-DVYSYGVVLLELLTGRVPVDPNRP--PGEHVL 370
Y APE K TKS D++S G +L E+L+ NRP PG+H L
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-------NRPIFPGKHYL 239
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 116/243 (47%), Gaps = 33/243 (13%)
Query: 171 YKGVLSD-GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELL------GYCADQN 223
Y+ L D G + AIKK+ +D + + R E+ ++ +L +V L G D
Sbjct: 37 YQAKLCDSGELVAIKKVLQDKRFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDVV 92
Query: 224 HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAM-----ALEFLHEHATPPV 278
+ L+ +Y+P + + RH +R + +T +I + M +L ++H +
Sbjct: 93 YLNLVLDYVPETVYR--VARHYSRAK----QTLPVIYVKLYMYQLFRSLAYIHSFG---I 143
Query: 279 IHRDFKCSNVLLDQNFRA-KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE--YASTGK 335
HRD K N+LLD + K+ DFG AK + + G+ + + + Y APE + +T
Sbjct: 144 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYYRAPELIFGAT-D 199
Query: 336 LTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQ 395
T+ DV+S G VL ELL G+ P+ P + ++ + +RE+ EM + +
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 258
Query: 396 YPK 398
+P+
Sbjct: 259 FPQ 261
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 21/168 (12%)
Query: 200 EVDLLSRLHS-PQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLI 258
EVD+L ++ P +++L L+ + M G L +L + + TR I
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKI 116
Query: 259 I--ALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIS 316
+ L+ AL L+ ++HRD K N+LLD + K+TDFG + + G+
Sbjct: 117 MRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP---GEKL 167
Query: 317 TRVLGTTGYLAPEYASTGK------LTTKSDVYSYGVVLLELLTGRVP 358
V GT YLAPE + D++S GV++ LL G P
Sbjct: 168 REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 16/185 (8%)
Query: 189 DGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRY 248
D +R+ + +E+ LL P ++ L D H L++E M G L + R
Sbjct: 61 DKSKRDPSEEIEI-LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ---- 115
Query: 249 RPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL-LDQNFR---AKVTDFGLA 304
+ R + +E+LH V+HRD K SN+L +D++ ++ DFG A
Sbjct: 116 KFFSEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFA 172
Query: 305 KMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPV--DPN 362
K + + NG + T T ++APE D++S G++L +L G P P+
Sbjct: 173 KQLRAE-NGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPS 230
Query: 363 RPPGE 367
P E
Sbjct: 231 DTPEE 235
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 17/166 (10%)
Query: 198 RMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRY---RPLDWR 254
R E+ +S L P LV L D N ++I E+M G L + + +N+ +++
Sbjct: 202 RKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYM 261
Query: 255 TRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL--DQNFRAKVTDFGLAKMVSDKIN 312
++ L C M HE+ +H D K N++ ++ K+ DFGL + K +
Sbjct: 262 RQVCKGL-CHM-----HENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 312
Query: 313 GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
+++T GT + APE A + +D++S GV+ LL+G P
Sbjct: 313 VKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 17/166 (10%)
Query: 198 RMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRY---RPLDWR 254
R E+ +S L P LV L D N ++I E+M G L + + +N+ +++
Sbjct: 96 RKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYM 155
Query: 255 TRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL--DQNFRAKVTDFGLAKMVSDKIN 312
++ L C M HE+ +H D K N++ ++ K+ DFGL + K +
Sbjct: 156 RQVCKGL-CHM-----HENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 206
Query: 313 GQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
+++T GT + APE A + +D++S GV+ LL+G P
Sbjct: 207 VKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ FGLA+ D++ G ++TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----WY 188
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 14/109 (12%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVS-DKINGQISTRVLGTTG 324
L+++H + V+HRD K SN+L++ K+ DFGLA++ + + T + T
Sbjct: 156 GLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRW 212
Query: 325 YLAPEYASTGKLTTKS-DVYSYGVVLLELLTGRVPVDPNRP--PGEHVL 370
Y APE K TKS D++S G +L E+L+ NRP PG+H L
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-------NRPIFPGKHYL 254
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 11/159 (6%)
Query: 200 EVDLLSRLHS---PQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTR 256
EV LL RL + P +V L+ CA I + + Q L + ++ P
Sbjct: 61 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 120
Query: 257 LIIAL--DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQ 314
I L L+FLH + ++HRD K N+L+ K+ DFGLA++ S ++
Sbjct: 121 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-- 175
Query: 315 ISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELL 353
T V+ T Y APE T D++S G + E+
Sbjct: 176 -LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 227 LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALD-----CAMALEFLHEHATPPVIHR 281
LI++Y NG+L +L + LD ++ L +A C + E P + HR
Sbjct: 112 LITDYHENGSLYDYL-----KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHR 166
Query: 282 DFKCSNVLLDQNFRAKVTDFGLA-KMVSDKINGQI--STRVLGTTGYLAPEYASTG---- 334
D K N+L+ +N + D GLA K +SD I +TRV GT Y+ PE
Sbjct: 167 DLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRYMPPEVLDESLNRN 225
Query: 335 --KLTTKSDVYSYGVVLLEL 352
+ +D+YS+G++L E+
Sbjct: 226 HFQSYIMADMYSFGLILWEV 245
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 250 PLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSD 309
P+ + + A +EFL ++ IHRD N+LL +N K+ DFGLA+ +
Sbjct: 195 PITMEDLISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 310 KINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
+ ++APE +TKSDV+SYGV+L E+ +
Sbjct: 252 NPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ DF LA+ D++ G ++TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----WY 188
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 89/183 (48%), Gaps = 11/183 (6%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTL 237
G A K + G + + + E+ ++++L L++L +N +L+ EY+ G L
Sbjct: 114 GLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173
Query: 238 QQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL-LDQNFRA 296
+ + LD T L + C + +H+ ++H D K N+L ++++ +
Sbjct: 174 FDRIIDESYNLTELD--TILFMKQICE-GIRHMHQMY---ILHLDLKPENILCVNRDAKQ 227
Query: 297 -KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTG 355
K+ DFGLA+ + +++ GT +LAPE + ++ +D++S GV+ LL+G
Sbjct: 228 IKIIDFGLARRYKPREKLKVN---FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
Query: 356 RVP 358
P
Sbjct: 285 LSP 287
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ D GLA+ D++ G ++TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----WY 188
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 280 HRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTK 339
HRD K N+L+ + A + DFG+A +D+ Q+ V GT Y APE S T +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYR 215
Query: 340 SDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALPR 377
+D+Y+ VL E LTG P ++ ++ A+PR
Sbjct: 216 ADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPR 253
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ D GLA+ D++ G ++TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----WY 188
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 175 LSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHS-PQLVELLGYCA--------DQNHR 225
+ G A+K+L + +++ RA EV + +L P +V+ + Q
Sbjct: 50 VGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEF 109
Query: 226 LLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKC 285
LL++E + G L + L + +R PL T L I A++ +H PP+IHRD K
Sbjct: 110 LLLTE-LCKGQLVEFLKKMESR-GPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKV 166
Query: 286 SNVLLDQNFRAKVTDFGLAKMVS 308
N+LL K+ DFG A +S
Sbjct: 167 ENLLLSNQGTIKLCDFGSATTIS 189
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Query: 194 ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDW 253
++ R E+ +L RL P +++L L+ E + G L + Y D
Sbjct: 92 KKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRI-VEKGYYSERDA 150
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQ---NFRAKVTDFGLAKMVSDK 310
+ L+ A+ +LHE+ ++HRD K N+L + K+ DFGL+K+V +
Sbjct: 151 ADAVKQILE---AVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204
Query: 311 INGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNR 363
+ + V GT GY APE + D++S G++ LL G P R
Sbjct: 205 V---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER 254
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 15/175 (8%)
Query: 188 RDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNR 247
R G RE R EV++L + P ++ L ++ +LI E + G L L +
Sbjct: 54 RRGVSREEIER-EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESL 112
Query: 248 YRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNV-LLDQNF---RAKVTDFGL 303
D T+ + L+ +H + + H D K N+ LLD+N R K+ DFG+
Sbjct: 113 TE--DEATQFL-----KQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 165
Query: 304 AKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
A + G + GT ++APE + L ++D++S GV+ LL+G P
Sbjct: 166 AHKIE---AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 22/203 (10%)
Query: 178 GTVAAIKKLHRDGKQRERAFRM-EVDLLSRLHSPQLVELLGYCADQN--HRLLISEYMPN 234
G + AIK + R +M E ++L +L+ +V+L + H++LI E+ P
Sbjct: 34 GDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL---- 290
G+L L +N Y L LI+ D + L E+ ++HR+ K N++
Sbjct: 94 GSLYTVLEEPSNAY-GLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGE 149
Query: 291 DQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTG--------KLTTKSDV 342
D K+TDFG A+ + D + + GT YL P+ K D+
Sbjct: 150 DGQSVYKLTDFGAARELEDD---EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDL 206
Query: 343 YSYGVVLLELLTGRVPVDPNRPP 365
+S GV TG +P P P
Sbjct: 207 WSIGVTFYHAATGSLPFRPFEGP 229
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SN+ ++++ K+ D GLA+ D++ G ++TR Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----WY 188
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 22/203 (10%)
Query: 178 GTVAAIKKLHRDGKQRERAFRM-EVDLLSRLHSPQLVELLGYCADQN--HRLLISEYMPN 234
G + AIK + R +M E ++L +L+ +V+L + H++LI E+ P
Sbjct: 34 GDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL---- 290
G+L L +N Y L LI+ D + L E+ ++HR+ K N++
Sbjct: 94 GSLYTVLEEPSNAY-GLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGE 149
Query: 291 DQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTG--------KLTTKSDV 342
D K+TDFG A+ + D + + GT YL P+ K D+
Sbjct: 150 DGQSVYKLTDFGAARELEDD---EQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDL 206
Query: 343 YSYGVVLLELLTGRVPVDPNRPP 365
+S GV TG +P P P
Sbjct: 207 WSIGVTFYHAATGSLPFRPFEGP 229
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SNV ++++ ++ DFGLA+ +++ G ++TR Y
Sbjct: 135 GLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WY 186
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELL G+
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SNV ++++ ++ DFGLA+ +++ G ++TR Y
Sbjct: 143 GLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WY 194
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELL G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 15/175 (8%)
Query: 188 RDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNR 247
R G RE R EV++L + P ++ L ++ +LI E + G L L +
Sbjct: 47 RRGVSREEIER-EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESL 105
Query: 248 YRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNV-LLDQNF---RAKVTDFGL 303
D T+ + L+ +H + + H D K N+ LLD+N R K+ DFG+
Sbjct: 106 TE--DEATQFL-----KQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158
Query: 304 AKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
A + G + GT ++APE + L ++D++S GV+ LL+G P
Sbjct: 159 AHKIE---AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+++H + +IHRD K SNV ++++ ++ DFGLA+ +++ G ++TR Y
Sbjct: 143 GLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WY 194
Query: 326 LAPEYASTGKLTTKS-DVYSYGVVLLELLTGR 356
APE ++ D++S G ++ ELL G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 15/175 (8%)
Query: 188 RDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNR 247
R G RE R EV++L + P ++ L ++ +LI E + G L L +
Sbjct: 68 RRGVSREEIER-EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESL 126
Query: 248 YRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNV-LLDQNF---RAKVTDFGL 303
D T+ + L+ +H + + H D K N+ LLD+N R K+ DFG+
Sbjct: 127 TE--DEATQFL-----KQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 179
Query: 304 AKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
A + G + GT ++APE + L ++D++S GV+ LL+G P
Sbjct: 180 AHKIE---AGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 13/162 (8%)
Query: 200 EVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLII 259
E+ ++++LH P+L+ L D+ +LI E++ G L + + + + +
Sbjct: 98 EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQ 157
Query: 260 ALDCAMALEFLHEHATPPVIHRDFKCSNVLLD--QNFRAKVTDFGLAKMVSDKIN-GQIS 316
A + L+ +HEH+ ++H D K N++ + + K+ DFGLA K+N +I
Sbjct: 158 ACE---GLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLAT----KLNPDEIV 207
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
T + APE + +D+++ GV+ LL+G P
Sbjct: 208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSP 249
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 78/185 (42%), Gaps = 29/185 (15%)
Query: 185 KLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRH 244
K R G RE R EV +L + P ++ L ++ +LI E + G L L
Sbjct: 50 KSSRRGVSREDIER-EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEK 108
Query: 245 NNRYRPLDWRTRLIIALDCAMALEFLHEHA-------TPPVIHRDFKCSNV-LLDQNF-- 294
+L A EFL + + + H D K N+ LLD+N
Sbjct: 109 E--------------SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 154
Query: 295 -RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELL 353
R K+ DFGLA + G + GT ++APE + L ++D++S GV+ LL
Sbjct: 155 PRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 354 TGRVP 358
+G P
Sbjct: 212 SGASP 216
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 24/159 (15%)
Query: 227 LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHA--------TPPV 278
LI+ + G+L +L + + W +A + L +LHE P +
Sbjct: 90 LITAFHDKGSLTDYL-----KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSI 144
Query: 279 IHRDFKCSNVLLDQNFRAKVTDFGLA-KMVSDKINGQISTRVLGTTGYLAPEYASTG--- 334
HRDFK NVLL + A + DFGLA + K G +V GT Y+APE
Sbjct: 145 AHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV-GTRRYMAPEVLEGAINF 203
Query: 335 --KLTTKSDVYSYGVVLLELLT----GRVPVDPNRPPGE 367
+ D+Y+ G+VL EL++ PVD P E
Sbjct: 204 QRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFE 242
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 180 VAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
+ A+K + R K E R ++ S H P +V H ++ EY G L +
Sbjct: 46 LVAVKYIERGEKIDENVKREIINHRSLRH-PNIVRFKEVILTPTHLAIVMEYASGGELFE 104
Query: 240 HLHRHNNRYRPLDWR---TRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQN--F 294
+ + R+ + R +LI + A A++ V HRD K N LLD +
Sbjct: 105 RIC-NAGRFSEDEARFFFQQLISGVSYAHAMQ---------VAHRDLKLENTLLDGSPAP 154
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTK-SDVYSYGVVLLELL 353
R K+ DFG +K + ++ Q + V GT Y+APE + K +DV+S GV L +L
Sbjct: 155 RLKIADFGYSK--ASVLHSQPKSAV-GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
Query: 354 TGRVPV-DPNRP 364
G P DP P
Sbjct: 212 VGAYPFEDPEEP 223
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 16/185 (8%)
Query: 189 DGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRY 248
D +R+ +E+ LL P ++ L D + +++E G L + R
Sbjct: 56 DKSKRDPTEEIEI-LLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQ---- 110
Query: 249 RPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVL-LDQNFR---AKVTDFGLA 304
+ R + +E+LH V+HRD K SN+L +D++ ++ DFG A
Sbjct: 111 KFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFA 167
Query: 305 KMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPV--DPN 362
K + + NG + T T ++APE D++S GV+L LTG P P+
Sbjct: 168 KQLRAE-NGLLXTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPD 225
Query: 363 RPPGE 367
P E
Sbjct: 226 DTPEE 230
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 115/243 (47%), Gaps = 33/243 (13%)
Query: 171 YKGVLSD-GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELL------GYCADQN 223
Y+ L D G + AIKK+ + + R E+ ++ +L +V L G D+
Sbjct: 37 YQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 92
Query: 224 HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAM-----ALEFLHEHATPPV 278
+ L+ +Y+P + + RH +R + +T +I + M +L ++H +
Sbjct: 93 YLNLVLDYVPETVYR--VARHYSRAK----QTLPVIYVKLYMYQLFRSLAYIHSFG---I 143
Query: 279 IHRDFKCSNVLLDQNFRA-KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE--YASTGK 335
HRD K N+LLD + K+ DFG AK + + G+ + + + Y APE + +T
Sbjct: 144 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYYRAPELIFGAT-D 199
Query: 336 LTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQ 395
T+ DV+S G VL ELL G+ P+ P + ++ + +RE+ EM + +
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK 258
Query: 396 YPK 398
+P+
Sbjct: 259 FPQ 261
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 78/185 (42%), Gaps = 29/185 (15%)
Query: 185 KLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRH 244
K R G RE R EV +L + P ++ L ++ +LI E + G L L
Sbjct: 50 KSSRRGVSREDIER-EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK 108
Query: 245 NNRYRPLDWRTRLIIALDCAMALEFLHEHA-------TPPVIHRDFKCSNV-LLDQNF-- 294
+L A EFL + + + H D K N+ LLD+N
Sbjct: 109 E--------------SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 154
Query: 295 -RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELL 353
R K+ DFGLA + G + GT ++APE + L ++D++S GV+ LL
Sbjct: 155 PRIKIIDFGLAHKID---FGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 354 TGRVP 358
+G P
Sbjct: 212 SGASP 216
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 200 EVDLLSRLHS---PQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTR 256
EV LL RL + P +V L+ CA I + + Q L + ++ P
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 112
Query: 257 LIIAL--DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQ 314
I L L+FLH + ++HRD K N+L+ K+ DFGLA++ S ++
Sbjct: 113 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-- 167
Query: 315 ISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELL 353
V+ T Y APE T D++S G + E+
Sbjct: 168 -LAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 27/159 (16%)
Query: 215 LLGYCADQN-------HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMAL 267
+LG+ A N L+S+Y +G+L +L+R+ + + +AL A L
Sbjct: 60 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGL 114
Query: 268 EFLH-----EHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLA---KMVSDKINGQISTRV 319
LH P + HRD K N+L+ +N + D GLA +D I+ + RV
Sbjct: 115 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 174
Query: 320 LGTTGYLAPEYASTG------KLTTKSDVYSYGVVLLEL 352
GT Y+APE + ++D+Y+ G+V E+
Sbjct: 175 -GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 23/189 (12%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQ------NHRLLI 228
G A+KKL R + + +RA+R E+ LL ++ ++ LL Q L+
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 105
Query: 229 SEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNV 288
E M + L Q +H + R + L+ + C + H H+ +IHRD K SN+
Sbjct: 106 MELM-DANLCQVIHMELDHER----MSYLLYQMLCGIK----HLHSAG-IIHRDLKPSNI 155
Query: 289 LLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
++ + K+ DFGLA+ S + T + T Y APE D++S G +
Sbjct: 156 VVKSDCTLKILDFGLARTASTNF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 212
Query: 349 LLELLTGRV 357
+ EL+ G V
Sbjct: 213 MGELVKGSV 221
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 27/159 (16%)
Query: 215 LLGYCADQN-------HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMAL 267
+LG+ A N L+S+Y +G+L +L+R+ + + +AL A L
Sbjct: 65 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGL 119
Query: 268 EFLH-----EHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLA---KMVSDKINGQISTRV 319
LH P + HRD K N+L+ +N + D GLA +D I+ + RV
Sbjct: 120 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 179
Query: 320 LGTTGYLAPEYASTG------KLTTKSDVYSYGVVLLEL 352
GT Y+APE + ++D+Y+ G+V E+
Sbjct: 180 -GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 27/159 (16%)
Query: 215 LLGYCADQN-------HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMAL 267
+LG+ A N L+S+Y +G+L +L+R+ + + +AL A L
Sbjct: 98 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGL 152
Query: 268 EFLH-----EHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLA---KMVSDKINGQISTRV 319
LH P + HRD K N+L+ +N + D GLA +D I+ + RV
Sbjct: 153 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 212
Query: 320 LGTTGYLAPEYASTG------KLTTKSDVYSYGVVLLEL 352
GT Y+APE + ++D+Y+ G+V E+
Sbjct: 213 -GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 112/238 (47%), Gaps = 24/238 (10%)
Query: 171 YKGVLSDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYC------ADQNH 224
++ L + AIKK+ +D + + R E+ ++ + P +V+L + D+
Sbjct: 57 FQAKLVESDEVAIKKVLQDKRFKNR----ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112
Query: 225 RLLISEYMPNGTLQQHLHRHNNRYRPLDWRT-RLIIALDCAMALEFLHEHATPPVIHRDF 283
L+ EY+P + ++R + Y L L+I L L L + + HRD
Sbjct: 113 LNLVLEYVP-----ETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDI 167
Query: 284 KCSNVLLDQ-NFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE--YASTGKLTTKS 340
K N+LLD + K+ DFG AK++ I G+ + + + Y APE + +T TT
Sbjct: 168 KPQNLLLDPPSGVLKLIDFGSAKIL---IAGEPNVSXICSRYYRAPELIFGATN-YTTNI 223
Query: 341 DVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEMVDPSLQGQYPK 398
D++S G V+ EL+ G+ P+ P + ++ + SRE+ M ++ ++P+
Sbjct: 224 DIWSTGCVMAELMQGQ-PLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQ 280
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 85/192 (44%), Gaps = 21/192 (10%)
Query: 180 VAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
+ A+K + R K E R ++ S H P +V H ++ EY G L +
Sbjct: 45 LVAVKYIERGEKIDENVKREIINHRSLRH-PNIVRFKEVILTPTHLAIVMEYASGGELFE 103
Query: 240 HLHRHNNRYRPLDWR---TRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQN--F 294
+ + R+ + R +LI + A++ V HRD K N LLD +
Sbjct: 104 RIC-NAGRFSEDEARFFFQQLISGVSYCHAMQ---------VCHRDLKLENTLLDGSPAP 153
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTK-SDVYSYGVVLLELL 353
R K+ DFG +K S ++ Q + V GT Y+APE + K +DV+S GV L +L
Sbjct: 154 RLKICDFGYSK--SSVLHSQPKSTV-GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 210
Query: 354 TGRVPV-DPNRP 364
G P DP P
Sbjct: 211 VGAYPFEDPEEP 222
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 27/159 (16%)
Query: 215 LLGYCADQN-------HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMAL 267
+LG+ A N L+S+Y +G+L +L+R+ + + +AL A L
Sbjct: 62 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGL 116
Query: 268 EFLH-----EHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLA---KMVSDKINGQISTRV 319
LH P + HRD K N+L+ +N + D GLA +D I+ + RV
Sbjct: 117 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 176
Query: 320 LGTTGYLAPEYASTG------KLTTKSDVYSYGVVLLEL 352
GT Y+APE + ++D+Y+ G+V E+
Sbjct: 177 -GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 27/159 (16%)
Query: 215 LLGYCADQN-------HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMAL 267
+LG+ A N L+S+Y +G+L +L+R+ + + +AL A L
Sbjct: 85 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGL 139
Query: 268 EFLH-----EHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLA---KMVSDKINGQISTRV 319
LH P + HRD K N+L+ +N + D GLA +D I+ + RV
Sbjct: 140 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 199
Query: 320 LGTTGYLAPEYASTG------KLTTKSDVYSYGVVLLEL 352
GT Y+APE + ++D+Y+ G+V E+
Sbjct: 200 -GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 110/232 (47%), Gaps = 33/232 (14%)
Query: 171 YKGVLSD-GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELL------GYCADQN 223
Y+ L D G + AIKK+ + + R E+ ++ +L +V L G D+
Sbjct: 37 YQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 92
Query: 224 HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAM-----ALEFLHEHATPPV 278
+ L+ +Y+P + + RH +R + +T +I + M +L ++H +
Sbjct: 93 YLNLVLDYVPETVYR--VARHYSRAK----QTLPVIYVKLYMYQLFRSLAYIHSFG---I 143
Query: 279 IHRDFKCSNVLLDQNFRA-KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE--YASTGK 335
HRD K N+LLD + K+ DFG AK + + G+ + + + Y APE + +T
Sbjct: 144 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSYICSRYYRAPELIFGAT-D 199
Query: 336 LTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEM 387
T+ DV+S G VL ELL G+ P+ P + ++ + +RE+ EM
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 27/159 (16%)
Query: 215 LLGYCADQN-------HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMAL 267
+LG+ A N L+S+Y +G+L +L+R+ + + +AL A L
Sbjct: 59 ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGL 113
Query: 268 EFLH-----EHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLA---KMVSDKINGQISTRV 319
LH P + HRD K N+L+ +N + D GLA +D I+ + RV
Sbjct: 114 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 173
Query: 320 LGTTGYLAPEYASTG------KLTTKSDVYSYGVVLLEL 352
GT Y+APE + ++D+Y+ G+V E+
Sbjct: 174 -GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+FLH H V+HRD K N+L+ + + K+ DFGLA++ S ++ T V+ T Y
Sbjct: 132 GLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLWY 185
Query: 326 LAPEYASTGKLTTKSDVYSYGVVLLELL 353
APE T D++S G + E+
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 78/185 (42%), Gaps = 29/185 (15%)
Query: 185 KLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRH 244
K R G RE R EV +L + P ++ L ++ +LI E + G L L
Sbjct: 50 KSSRRGVSREDIER-EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK 108
Query: 245 NNRYRPLDWRTRLIIALDCAMALEFLHEHA-------TPPVIHRDFKCSNV-LLDQNF-- 294
+L A EFL + + + H D K N+ LLD+N
Sbjct: 109 E--------------SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 154
Query: 295 -RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELL 353
R K+ DFGLA + G + GT ++APE + L ++D++S GV+ LL
Sbjct: 155 PRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 354 TGRVP 358
+G P
Sbjct: 212 SGASP 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 78/185 (42%), Gaps = 29/185 (15%)
Query: 185 KLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRH 244
K R G RE R EV +L + P ++ L ++ +LI E + G L L
Sbjct: 49 KSSRRGVSREDIER-EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK 107
Query: 245 NNRYRPLDWRTRLIIALDCAMALEFLHEHA-------TPPVIHRDFKCSNV-LLDQNF-- 294
+L A EFL + + + H D K N+ LLD+N
Sbjct: 108 E--------------SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 153
Query: 295 -RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELL 353
R K+ DFGLA + G + GT ++APE + L ++D++S GV+ LL
Sbjct: 154 PRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 210
Query: 354 TGRVP 358
+G P
Sbjct: 211 SGASP 215
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+FLH H V+HRD K N+L+ + + K+ DFGLA++ S ++ T V+ T Y
Sbjct: 132 GLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLWY 185
Query: 326 LAPEYASTGKLTTKSDVYSYGVVLLELL 353
APE T D++S G + E+
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 200 EVDLLSRLHS---PQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTR 256
EV LL RL + P +V L+ CA I + + Q L + ++ P
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 112
Query: 257 LIIAL--DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQ 314
I L L+FLH + ++HRD K N+L+ K+ DFGLA++ S ++
Sbjct: 113 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-- 167
Query: 315 ISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELL 353
V+ T Y APE T D++S G + E+
Sbjct: 168 -LDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 78/185 (42%), Gaps = 29/185 (15%)
Query: 185 KLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRH 244
K R G RE R EV +L + P ++ L ++ +LI E + G L L
Sbjct: 49 KSSRRGVSREDIER-EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK 107
Query: 245 NNRYRPLDWRTRLIIALDCAMALEFLHEHA-------TPPVIHRDFKCSNV-LLDQNF-- 294
+L A EFL + + + H D K N+ LLD+N
Sbjct: 108 E--------------SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 153
Query: 295 -RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELL 353
R K+ DFGLA + G + GT ++APE + L ++D++S GV+ LL
Sbjct: 154 PRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 210
Query: 354 TGRVP 358
+G P
Sbjct: 211 SGASP 215
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
L+FLH H V+HRD K N+L+ + + K+ DFGLA++ S ++ T V+ T Y
Sbjct: 132 GLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLWY 185
Query: 326 LAPEYASTGKLTTKSDVYSYGVVLLELL 353
APE T D++S G + E+
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 78/185 (42%), Gaps = 29/185 (15%)
Query: 185 KLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRH 244
K R G RE R EV +L + P ++ L ++ +LI E + G L L
Sbjct: 50 KSSRRGVSREDIER-EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK 108
Query: 245 NNRYRPLDWRTRLIIALDCAMALEFLHEHA-------TPPVIHRDFKCSNV-LLDQNF-- 294
+L A EFL + + + H D K N+ LLD+N
Sbjct: 109 E--------------SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 154
Query: 295 -RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELL 353
R K+ DFGLA + G + GT ++APE + L ++D++S GV+ LL
Sbjct: 155 PRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 354 TGRVP 358
+G P
Sbjct: 212 SGASP 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 78/185 (42%), Gaps = 29/185 (15%)
Query: 185 KLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRH 244
K R G RE R EV +L + P ++ L ++ +LI E + G L L
Sbjct: 50 KSSRRGVSREDIER-EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK 108
Query: 245 NNRYRPLDWRTRLIIALDCAMALEFLHEHA-------TPPVIHRDFKCSNV-LLDQNF-- 294
+L A EFL + + + H D K N+ LLD+N
Sbjct: 109 E--------------SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 154
Query: 295 -RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELL 353
R K+ DFGLA + G + GT ++APE + L ++D++S GV+ LL
Sbjct: 155 PRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 354 TGRVP 358
+G P
Sbjct: 212 SGASP 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 78/185 (42%), Gaps = 29/185 (15%)
Query: 185 KLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRH 244
K R G RE R EV +L + P ++ L ++ +LI E + G L L
Sbjct: 50 KSSRRGVSREDIER-EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK 108
Query: 245 NNRYRPLDWRTRLIIALDCAMALEFLHEHA-------TPPVIHRDFKCSNV-LLDQNF-- 294
+L A EFL + + + H D K N+ LLD+N
Sbjct: 109 E--------------SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 154
Query: 295 -RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELL 353
R K+ DFGLA + G + GT ++APE + L ++D++S GV+ LL
Sbjct: 155 PRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 354 TGRVP 358
+G P
Sbjct: 212 SGASP 216
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 78/185 (42%), Gaps = 29/185 (15%)
Query: 185 KLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRH 244
K R G RE R EV +L + P ++ L ++ +LI E + G L L
Sbjct: 50 KSSRRGVSREDIER-EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK 108
Query: 245 NNRYRPLDWRTRLIIALDCAMALEFLHEHA-------TPPVIHRDFKCSNV-LLDQNF-- 294
+L A EFL + + + H D K N+ LLD+N
Sbjct: 109 E--------------SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 154
Query: 295 -RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELL 353
R K+ DFGLA + G + GT ++APE + L ++D++S GV+ LL
Sbjct: 155 PRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 354 TGRVP 358
+G P
Sbjct: 212 SGASP 216
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 110/232 (47%), Gaps = 33/232 (14%)
Query: 171 YKGVLSD-GTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELL------GYCADQN 223
Y+ L D G + AIKK+ + + R E+ ++ +L +V L G D+
Sbjct: 37 YQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 92
Query: 224 HRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAM-----ALEFLHEHATPPV 278
+ L+ +Y+P + + RH +R + +T +I + M +L ++H +
Sbjct: 93 YLNLVLDYVPATVYR--VARHYSRAK----QTLPVIYVKLYMYQLFRSLAYIHSFG---I 143
Query: 279 IHRDFKCSNVLLDQNFRA-KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE--YASTGK 335
HRD K N+LLD + K+ DFG AK + + G+ + + + Y APE + +T
Sbjct: 144 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---VRGEPNVSXICSRYYRAPELIFGAT-D 199
Query: 336 LTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALPRLTSREEAVEM 387
T+ DV+S G VL ELL G+ P+ P + ++ + +RE+ EM
Sbjct: 200 YTSSIDVWSAGCVLAELLLGQ-PIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 200 EVDLLSRLHS---PQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTR 256
EV LL RL + P +V L+ CA I + + Q L + ++ P
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 112
Query: 257 LIIAL--DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQ 314
I L L+FLH + ++HRD K N+L+ K+ DFGLA++ S ++
Sbjct: 113 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-- 167
Query: 315 ISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELL 353
V+ T Y APE T D++S G + E+
Sbjct: 168 -LFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 20/186 (10%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLG-YCADQNHRLLISEYMP 233
G AIKKL R + +RA+R E+ LL + ++ LL + + R Y+
Sbjct: 67 GEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 125
Query: 234 NGTLQQHLHRHNNRYRPLDWRTRLIIALDCAM--ALEFLHEHATPPVIHRDFKCSNVLLD 291
+Q L + +++ I L M L+++H V+HRD K N+ ++
Sbjct: 126 MPFMQTDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVN 178
Query: 292 QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYA-STGKLTTKSDVYSYGVVLL 350
++ K+ DFGLA+ ++ G + TR Y APE S D++S G ++
Sbjct: 179 EDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWMHYNQTVDIWSVGCIMA 233
Query: 351 ELLTGR 356
E+LTG+
Sbjct: 234 EMLTGK 239
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 78/185 (42%), Gaps = 29/185 (15%)
Query: 185 KLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRH 244
K R G RE R EV +L + P ++ L ++ +LI E + G L L
Sbjct: 50 KSSRRGVSREDIER-EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK 108
Query: 245 NNRYRPLDWRTRLIIALDCAMALEFLHEHA-------TPPVIHRDFKCSNV-LLDQNF-- 294
+L A EFL + + + H D K N+ LLD+N
Sbjct: 109 E--------------SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 154
Query: 295 -RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELL 353
R K+ DFGLA + G + GT ++APE + L ++D++S GV+ LL
Sbjct: 155 PRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 354 TGRVP 358
+G P
Sbjct: 212 SGASP 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 78/185 (42%), Gaps = 29/185 (15%)
Query: 185 KLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRH 244
K R G RE R EV +L + P ++ L ++ +LI E + G L L
Sbjct: 50 KSSRRGVSREDIER-EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK 108
Query: 245 NNRYRPLDWRTRLIIALDCAMALEFLHEHA-------TPPVIHRDFKCSNV-LLDQNF-- 294
+L A EFL + + + H D K N+ LLD+N
Sbjct: 109 E--------------SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 154
Query: 295 -RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELL 353
R K+ DFGLA + G + GT ++APE + L ++D++S GV+ LL
Sbjct: 155 PRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 354 TGRVP 358
+G P
Sbjct: 212 SGASP 216
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 210 PQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYR-PLDWRTRLIIALDCAMALE 268
P +V+L DQ H L+ E + G L + + + + + R +++ A+
Sbjct: 66 PNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS-----AVS 120
Query: 269 FLHEHATPPVIHRDFKCSNVLL---DQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGY 325
+H+ V+HRD K N+L + N K+ DFG A++ N + T T Y
Sbjct: 121 HMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD-NQPLKTPCF-TLHY 175
Query: 326 LAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
APE + D++S GV+L +L+G+VP
Sbjct: 176 AAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDL-LSRLHSPQLVELLGYCADQNH----RLLISEYM 232
G A+K L+ K R+ EVD P +V +L + +H L+I E M
Sbjct: 54 GQKCALKLLYDSPKARQ-----EVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECM 108
Query: 233 PNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL-- 290
G L + ++ R I D A++FLH H + HRD K N+L
Sbjct: 109 EGGELFSRIQERGDQ--AFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTS 163
Query: 291 -DQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVL 349
+++ K+TDFG AK + + T T Y+APE K D++S GV++
Sbjct: 164 KEKDAVLKLTDFGFAK---ETTQNALQTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIM 219
Query: 350 LELLTGRVPVDPN 362
LL G P N
Sbjct: 220 YILLCGFPPFYSN 232
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 78/185 (42%), Gaps = 29/185 (15%)
Query: 185 KLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRH 244
K R G RE R EV +L + P ++ L ++ +LI E + G L L
Sbjct: 50 KSSRRGVSREDIER-EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK 108
Query: 245 NNRYRPLDWRTRLIIALDCAMALEFLHEHA-------TPPVIHRDFKCSNV-LLDQNF-- 294
+L A EFL + + + H D K N+ LLD+N
Sbjct: 109 E--------------SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 154
Query: 295 -RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELL 353
R K+ DFGLA + G + GT ++APE + L ++D++S GV+ LL
Sbjct: 155 PRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 354 TGRVP 358
+G P
Sbjct: 212 SGASP 216
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 78/185 (42%), Gaps = 29/185 (15%)
Query: 185 KLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRH 244
K R G RE R EV +L + P ++ L ++ +LI E + G L L
Sbjct: 50 KSSRRGVSREDIER-EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK 108
Query: 245 NNRYRPLDWRTRLIIALDCAMALEFLHEHA-------TPPVIHRDFKCSNV-LLDQNF-- 294
+L A EFL + + + H D K N+ LLD+N
Sbjct: 109 E--------------SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 154
Query: 295 -RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELL 353
R K+ DFGLA + G + GT ++APE + L ++D++S GV+ LL
Sbjct: 155 PRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 354 TGRVP 358
+G P
Sbjct: 212 SGASP 216
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 178 GTVAAIKKLHRDGKQRERAFRMEVDL-LSRLHSPQLVELLGYCADQNH----RLLISEYM 232
G A+K L+ K R+ EVD P +V +L + +H L+I E M
Sbjct: 35 GQKCALKLLYDSPKARQ-----EVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECM 89
Query: 233 PNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL-- 290
G L + ++ R I D A++FLH H + HRD K N+L
Sbjct: 90 EGGELFSRIQERGDQ--AFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTS 144
Query: 291 -DQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVL 349
+++ K+TDFG AK + + T T Y+APE K D++S GV++
Sbjct: 145 KEKDAVLKLTDFGFAK---ETTQNALQTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIM 200
Query: 350 LELLTGRVPVDPN 362
LL G P N
Sbjct: 201 YILLCGFPPFYSN 213
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 78/185 (42%), Gaps = 29/185 (15%)
Query: 185 KLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRH 244
K R G RE R EV +L + P ++ L ++ +LI E + G L L
Sbjct: 50 KSSRRGVSREDIER-EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK 108
Query: 245 NNRYRPLDWRTRLIIALDCAMALEFLHEHA-------TPPVIHRDFKCSNV-LLDQNF-- 294
+L A EFL + + + H D K N+ LLD+N
Sbjct: 109 E--------------SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK 154
Query: 295 -RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELL 353
R K+ DFGLA + G + GT ++APE + L ++D++S GV+ LL
Sbjct: 155 PRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 211
Query: 354 TGRVP 358
+G P
Sbjct: 212 SGASP 216
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 20/186 (10%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLG-YCADQNHRLLISEYMP 233
G AIKKL R + +RA+R E+ LL + ++ LL + + R Y+
Sbjct: 49 GEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 107
Query: 234 NGTLQQHLHRHNNRYRPLDWRTRLIIALDCAM--ALEFLHEHATPPVIHRDFKCSNVLLD 291
+Q L + L + I L M L+++H V+HRD K N+ ++
Sbjct: 108 MPFMQTDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVN 160
Query: 292 QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYA-STGKLTTKSDVYSYGVVLL 350
++ K+ DFGLA+ ++ G + TR Y APE S D++S G ++
Sbjct: 161 EDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILSWMHYNQTVDIWSVGCIMA 215
Query: 351 ELLTGR 356
E+LTG+
Sbjct: 216 EMLTGK 221
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 94/230 (40%), Gaps = 56/230 (24%)
Query: 179 TVAAIKKLHRDG------KQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYM 232
+ AIK ++++ K ER + EV L+ +LH P + L D+ + L+ E
Sbjct: 52 AIRAIKIMNKNKIRQINPKDVER-IKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELC 110
Query: 233 PNGTLQQHLHR---------------------------------HNNRYRPLDW--RTRL 257
G L L+ H R LD+ R +L
Sbjct: 111 HGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFR-ESLDFVQREKL 169
Query: 258 I--IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQN--FRAKVTDFGLAKMVSDKING 313
I I AL +LH + HRD K N L N F K+ DFGL+K NG
Sbjct: 170 ISNIMRQIFSALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG 226
Query: 314 Q---ISTRVLGTTGYLAPEYASTGKLTT--KSDVYSYGVVLLELLTGRVP 358
+ ++T+ GT ++APE +T + K D +S GV+L LL G VP
Sbjct: 227 EYYGMTTKA-GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP 275
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 15/175 (8%)
Query: 188 RDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNR 247
R G RE R EV +L ++ P ++ L ++ +LI E + G L L + +
Sbjct: 54 RRGVCREEIER-EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESL 112
Query: 248 YRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNV-LLDQNF---RAKVTDFGL 303
+ + + LD + +LH T + H D K N+ LLD+N K+ DFGL
Sbjct: 113 SEE-EATSFIKQILD---GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 304 AKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
A + D + + + GT ++APE + L ++D++S GV+ LL+G P
Sbjct: 166 AHEIEDGVEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 19/192 (9%)
Query: 178 GTVAAIKKLHR-DGKQRER--AFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPN 234
G V A+K +++ D +R FR E D+L + +L D+N+ L+ EY
Sbjct: 86 GQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVG 145
Query: 235 GTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNF 294
G L L + R P + R +A + MA++ +H +HRD K N+LLD+
Sbjct: 146 GDLLTLLSKFGERI-PAE-MARFYLA-EIVMAIDSVHRLG---YVHRDIKPDNILLDRCG 199
Query: 295 RAKVTDFGLAKMVSDKINGQISTRV-LGTTGYLAPEYAST-------GKLTTKSDVYSYG 346
++ DFG + + +G + + V +GT YL+PE G + D ++ G
Sbjct: 200 HIRLADFG--SCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALG 257
Query: 347 VVLLELLTGRVP 358
V E+ G+ P
Sbjct: 258 VFAYEMFYGQTP 269
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 23/189 (12%)
Query: 178 GTVAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQ------NHRLLI 228
G A+KKL R + + +RA+R E+ LL ++ ++ LL Q L+
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 107
Query: 229 SEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNV 288
E M + L Q +H + R + L+ + C + H H+ +IHRD K SN+
Sbjct: 108 MELM-DANLCQVIHMELDHER----MSYLLYQMLCGIK----HLHSAG-IIHRDLKPSNI 157
Query: 289 LLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVV 348
++ + K+ DFGLA+ + T + T Y APE D++S G +
Sbjct: 158 VVKSDCTLKILDFGLARTACTNF---MMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCI 214
Query: 349 LLELLTGRV 357
+ EL+ G V
Sbjct: 215 MGELVKGCV 223
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 85/192 (44%), Gaps = 21/192 (10%)
Query: 180 VAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
+ A+K + R G++ + E+ L P +V H ++ EY G L +
Sbjct: 46 LVAVKYIER-GEKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE 104
Query: 240 HLHRHNNRYRPLDWR---TRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQN--F 294
+ + R+ + R +LI + A++ V HRD K N LLD +
Sbjct: 105 RIC-NAGRFSEDEARFFFQQLISGVSYCHAMQ---------VCHRDLKLENTLLDGSPAP 154
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTK-SDVYSYGVVLLELL 353
R K+ DFG +K S ++ Q + V GT Y+APE + K +DV+S GV L +L
Sbjct: 155 RLKICDFGYSK--SSVLHSQPKSTV-GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
Query: 354 TGRVPV-DPNRP 364
G P DP P
Sbjct: 212 VGAYPFEDPEEP 223
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 37/210 (17%)
Query: 178 GTVAAIKKLH---RDGKQRERAFRMEVDLLSRLHS-PQLVELLGYCADQNHR--LLISEY 231
G V A+KK+ ++ +R FR E+ +L+ L +V LL N R L+ +Y
Sbjct: 34 GEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLLNVLRADNDRDVYLVFDY 92
Query: 232 MPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD 291
M H N P+ + + +++LH ++HRD K SN+LL+
Sbjct: 93 METDL---HAVIRANILEPVH---KQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLN 143
Query: 292 QNFRAKVTDFGLA------KMVSDKI-------------NGQISTRVLGTTGYLAPE-YA 331
KV DFGL+ + V++ I + I T + T Y APE
Sbjct: 144 AECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILL 203
Query: 332 STGKLTTKSDVYSYGVVLLELLTGRVPVDP 361
+ K T D++S G +L E+L G+ P+ P
Sbjct: 204 GSTKYTKGIDMWSLGCILGEILCGK-PIFP 232
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 18/181 (9%)
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIS 316
+ + A +EFL A+ IHRD N+LL + K+ DFGLA+ + +
Sbjct: 194 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 250
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALP 376
++APE T +SDV+S+GV+L E+ + L + P
Sbjct: 251 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------------LGASPYP 295
Query: 377 RLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQSLIPVVKNN 436
+ EE + + + P C E + RP +++V+ L +++ N
Sbjct: 296 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 355
Query: 437 A 437
A
Sbjct: 356 A 356
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 18/181 (9%)
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIS 316
+ + A +EFL A+ IHRD N+LL + K+ DFGLA+ + +
Sbjct: 201 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 257
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALP 376
++APE T +SDV+S+GV+L E+ + L + P
Sbjct: 258 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------------LGASPYP 302
Query: 377 RLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQSLIPVVKNN 436
+ EE + + + P C E + RP +++V+ L +++ N
Sbjct: 303 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 362
Query: 437 A 437
A
Sbjct: 363 A 363
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 18/181 (9%)
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIS 316
+ + A +EFL A+ IHRD N+LL + K+ DFGLA+ + +
Sbjct: 203 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 259
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALP 376
++APE T +SDV+S+GV+L E+ + L + P
Sbjct: 260 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------------LGASPYP 304
Query: 377 RLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQSLIPVVKNN 436
+ EE + + + P C E + RP +++V+ L +++ N
Sbjct: 305 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 364
Query: 437 A 437
A
Sbjct: 365 A 365
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 18/181 (9%)
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIS 316
+ + A +EFL A+ IHRD N+LL + K+ DFGLA+ + +
Sbjct: 196 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 252
Query: 317 TRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVLVSWALP 376
++APE T +SDV+S+GV+L E+ + L + P
Sbjct: 253 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS---------------LGASPYP 297
Query: 377 RLTSREEAVEMVDPSLQGQYPKKDLXXXXXXXXVCVQPEAAYRPLMTDVVQSLIPVVKNN 436
+ EE + + + P C E + RP +++V+ L +++ N
Sbjct: 298 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357
Query: 437 A 437
A
Sbjct: 358 A 358
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 77/176 (43%), Gaps = 32/176 (18%)
Query: 215 LLGYCA-DQNHR------LLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMAL 267
+LG+ A D R LI+ Y G+L +L + LD + L I L A L
Sbjct: 64 ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGL 118
Query: 268 EFLH-----EHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIST----R 318
LH P + HRD K N+L+ +N + + D GLA M S N Q+ R
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTN-QLDVGNNPR 177
Query: 319 VLGTTGYLAPEY------ASTGKLTTKSDVYSYGVVLLELLTGRVP---VDPNRPP 365
V GT Y+APE + D++++G+VL E+ V V+ +PP
Sbjct: 178 V-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP 232
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 77/176 (43%), Gaps = 32/176 (18%)
Query: 215 LLGYCA-DQNHR------LLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMAL 267
+LG+ A D R LI+ Y G+L +L + LD + L I L A L
Sbjct: 93 ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGL 147
Query: 268 EFLH-----EHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIST----R 318
LH P + HRD K N+L+ +N + + D GLA M S N Q+ R
Sbjct: 148 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTN-QLDVGNNPR 206
Query: 319 VLGTTGYLAPEY------ASTGKLTTKSDVYSYGVVLLELLTGRVP---VDPNRPP 365
V GT Y+APE + D++++G+VL E+ V V+ +PP
Sbjct: 207 V-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP 261
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 76/181 (41%), Gaps = 21/181 (11%)
Query: 184 KKLH-RDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLH 242
KKL RD ++ ER E + L P +V L +++ H LI + + G L + +
Sbjct: 58 KKLSARDHQKLER----EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI- 112
Query: 243 RHNNRYRPLDWRTRLIIALDCAMAL--EFLHEHATPPVIHRDFKCSNVLLDQNFRA---K 297
Y D A C + LH H V+HRD K N+LL + K
Sbjct: 113 VAREYYSEAD-------ASHCIQQILEAVLHCHQMG-VVHRDLKPENLLLASKLKGAAVK 164
Query: 298 VTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRV 357
+ DFGLA V + GT GYL+PE D+++ GV+L LL G
Sbjct: 165 LADFGLAIEVEGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYP 222
Query: 358 P 358
P
Sbjct: 223 P 223
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 35/199 (17%)
Query: 176 SDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGY---CADQNHRLL----I 228
S G AIKK+ +D + R R ++ DL + LH P +V+L Y +++ R + +
Sbjct: 46 STGMSVAIKKVIQDPRFRNRELQIMQDL-AVLHHPNIVQLQSYFYTLGERDRRDIYLNVV 104
Query: 229 SEYMPNGTLQQHLHRH-NNRYR------PLDWRT---RLIIALDCAMALEFLHEHATPPV 278
EY+P+ LHR N YR P+ + +LI ++ C LH + V
Sbjct: 105 MEYVPDT-----LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGC------LHLPSVN-V 152
Query: 279 IHRDFKCSNVLLDQ-NFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGK-L 336
HRD K NVL+++ + K+ DFG AK +S + + + + Y APE +
Sbjct: 153 CHRDIKPHNVLVNEADGTLKLCDFGSAKKLSP---SEPNVAYICSRYYRAPELIFGNQHY 209
Query: 337 TTKSDVYSYGVVLLELLTG 355
TT D++S G + E++ G
Sbjct: 210 TTAVDIWSVGCIFAEMMLG 228
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 77/176 (43%), Gaps = 32/176 (18%)
Query: 215 LLGYCA-DQNHR------LLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMAL 267
+LG+ A D R LI+ Y G+L +L + LD + L I L A L
Sbjct: 64 ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGL 118
Query: 268 EFLH-----EHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIST----R 318
LH P + HRD K N+L+ +N + + D GLA M S N Q+ R
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTN-QLDVGNNPR 177
Query: 319 VLGTTGYLAPEY------ASTGKLTTKSDVYSYGVVLLELLTGRVP---VDPNRPP 365
V GT Y+APE + D++++G+VL E+ V V+ +PP
Sbjct: 178 V-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP 232
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 79/189 (41%), Gaps = 15/189 (7%)
Query: 180 VAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
+ A+K + R E R ++ S H P +V H +I EY G L +
Sbjct: 47 LVAVKYIERGAAIDENVQREIINHRSLRH-PNIVRFKEVILTPTHLAIIMEYASGGELYE 105
Query: 240 HLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQN--FRAK 297
R N R + R + + H + HRD K N LLD + R K
Sbjct: 106 ---RICNAGRFSEDEARFFFQ-QLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLK 158
Query: 298 VTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTK-SDVYSYGVVLLELLTGR 356
+ DFG +K S ++ Q + V GT Y+APE + K +DV+S GV L +L G
Sbjct: 159 ICDFGYSK--SSVLHSQPKSTV-GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGA 215
Query: 357 VPV-DPNRP 364
P DP P
Sbjct: 216 YPFEDPEEP 224
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 84/192 (43%), Gaps = 21/192 (10%)
Query: 180 VAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
+ A+K + R K E R ++ S H P +V H ++ EY G L +
Sbjct: 46 LVAVKYIERGEKIDENVKREIINHRSLRH-PNIVRFKEVILTPTHLAIVMEYASGGELFE 104
Query: 240 HLHRHNNRYRPLDWR---TRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQN--F 294
+ + R+ + R +LI + A++ V HRD K N LLD +
Sbjct: 105 RIC-NAGRFSEDEARFFFQQLISGVSYCHAMQ---------VCHRDLKLENTLLDGSPAP 154
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTK-SDVYSYGVVLLELL 353
R K+ FG +K S ++ Q + V GT Y+APE + K +DV+S GV L +L
Sbjct: 155 RLKICAFGYSK--SSVLHSQPKSTV-GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
Query: 354 TGRVPV-DPNRP 364
G P DP P
Sbjct: 212 VGAYPFEDPEEP 223
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 8/165 (4%)
Query: 197 FRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTR 256
+ E + L P +VELL + ++ E+M L + + +
Sbjct: 73 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQNFRAKVTDFGLAKMVSDKING 313
AL + H++ +IHRD K NVLL + + K+ DFG+A + + +G
Sbjct: 133 SHYMRQILEALRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGE--SG 187
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
++ +GT ++APE DV+ GV+L LL+G +P
Sbjct: 188 LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 76/181 (41%), Gaps = 21/181 (11%)
Query: 184 KKLH-RDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLH 242
KKL RD ++ ER E + L P +V L +++ H LI + + G L + +
Sbjct: 47 KKLSARDHQKLER----EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI- 101
Query: 243 RHNNRYRPLDWRTRLIIALDCAMAL--EFLHEHATPPVIHRDFKCSNVLLDQNFRA---K 297
Y D A C + LH H V+HR+ K N+LL + K
Sbjct: 102 VAREYYSEAD-------ASHCIQQILEAVLHCHQMG-VVHRNLKPENLLLASKLKGAAVK 153
Query: 298 VTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRV 357
+ DFGLA V + GT GYL+PE D+++ GV+L LL G
Sbjct: 154 LADFGLAIEVEGEQQAWFG--FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYP 211
Query: 358 P 358
P
Sbjct: 212 P 212
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 6/131 (4%)
Query: 229 SEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNV 288
S Y+ ++ LH+ + +PL L+++H + VIHRD K SN+
Sbjct: 133 SVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNL 189
Query: 289 LLDQNFRAKVTDFGLAK--MVSDKINGQISTRVLGTTGYLAPEYA-STGKLTTKSDVYSY 345
L+++N K+ DFG+A+ S + T + T Y APE S + T D++S
Sbjct: 190 LVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSV 249
Query: 346 GVVLLELLTGR 356
G + E+L R
Sbjct: 250 GCIFGEMLARR 260
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 6/131 (4%)
Query: 229 SEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNV 288
S Y+ ++ LH+ + +PL L+++H + VIHRD K SN+
Sbjct: 134 SVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNL 190
Query: 289 LLDQNFRAKVTDFGLAK--MVSDKINGQISTRVLGTTGYLAPEYA-STGKLTTKSDVYSY 345
L+++N K+ DFG+A+ S + T + T Y APE S + T D++S
Sbjct: 191 LVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSV 250
Query: 346 GVVLLELLTGR 356
G + E+L R
Sbjct: 251 GCIFGEMLARR 261
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 36/135 (26%)
Query: 259 IALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDK-------- 310
I + + F+HE +IHRD K +N LL+Q+ KV DFGLA+ ++ +
Sbjct: 134 ILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVND 190
Query: 311 -------------INGQISTRVLGTTGYLAPEYASTGKLTTKS-DVYSYGVVLLELL--- 353
+ Q+++ V+ T Y APE + TKS D++S G + ELL
Sbjct: 191 LEENEEPGPHNKNLKKQLTSHVV-TRWYRAPELILLQENYTKSIDIWSTGCIFAELLNML 249
Query: 354 -------TGRVPVDP 361
T R P+ P
Sbjct: 250 QSHINDPTNRFPLFP 264
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 20/187 (10%)
Query: 178 GTVAAIKKLHRDGKQRERAFRME-VDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT 236
G A+KK+ R FR+E + + L SP++V L G + + E + G+
Sbjct: 83 GFQCAVKKV------RLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGS 136
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAM-ALEFLHEHATPPVIHRDFKCSNVLLDQNF- 294
L Q + + P D R + L A+ LE+LH T ++H D K NVLL +
Sbjct: 137 LGQLIKQMGCL--PED---RALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGS 188
Query: 295 RAKVTDFGLAKMVS-DKINGQISTR--VLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLE 351
RA + DFG A + D + + T + GT ++APE K D++S ++L
Sbjct: 189 RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLH 248
Query: 352 LLTGRVP 358
+L G P
Sbjct: 249 MLNGCHP 255
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 20/187 (10%)
Query: 178 GTVAAIKKLHRDGKQRERAFRME-VDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT 236
G A+KK+ R FR+E + + L SP++V L G + + E + G+
Sbjct: 99 GFQCAVKKV------RLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGS 152
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAM-ALEFLHEHATPPVIHRDFKCSNVLLDQNF- 294
L Q + + P D R + L A+ LE+LH T ++H D K NVLL +
Sbjct: 153 LGQLIKQMGCL--PED---RALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGS 204
Query: 295 RAKVTDFGLAKMVS-DKINGQISTR--VLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLE 351
RA + DFG A + D + + T + GT ++APE K D++S ++L
Sbjct: 205 RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLH 264
Query: 352 LLTGRVP 358
+L G P
Sbjct: 265 MLNGCHP 271
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 20/187 (10%)
Query: 178 GTVAAIKKLHRDGKQRERAFRME-VDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT 236
G A+KK+ R FR+E + + L SP++V L G + + E + G+
Sbjct: 97 GFQCAVKKV------RLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGS 150
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAM-ALEFLHEHATPPVIHRDFKCSNVLLDQNF- 294
L Q + + P D R + L A+ LE+LH T ++H D K NVLL +
Sbjct: 151 LGQLIKQMGCL--PED---RALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGS 202
Query: 295 RAKVTDFGLAKMVS-DKINGQISTR--VLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLE 351
RA + DFG A + D + + T + GT ++APE K D++S ++L
Sbjct: 203 RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLH 262
Query: 352 LLTGRVP 358
+L G P
Sbjct: 263 MLNGCHP 269
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 15/175 (8%)
Query: 188 RDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNR 247
R G RE R EV +L ++ ++ L ++ +LI E + G L L + +
Sbjct: 54 RRGVSREEIER-EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES- 111
Query: 248 YRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNV-LLDQNF---RAKVTDFGL 303
L + +LH T + H D K N+ LLD+N K+ DFGL
Sbjct: 112 ---LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
Query: 304 AKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
A + D + + + GT ++APE + L ++D++S GV+ LL+G P
Sbjct: 166 AHEIEDGVEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 61/228 (26%)
Query: 181 AAIKKLHR---DGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISE-YMPNGT 236
AIKK++R D +R R E+ +L+RL S ++ L H L+I E +
Sbjct: 56 VAIKKVNRMFEDLIDCKRILR-EITILNRLKSDYIIRL--------HDLIIPEDLLKFDE 106
Query: 237 LQQHLHRHNNRYRPLDWRTRLI--------IALDCAMALEFLHEHATPPVIHRDFKCSNV 288
L L ++ + L ++T + I + + +F+HE +IHRD K +N
Sbjct: 107 LYIVLEIADSDLKKL-FKTPIFLTEQHVKTILYNLLLGEKFIHESG---IIHRDLKPANC 162
Query: 289 LLDQNFRAKVTDFGLAKMV-SDK-----------------------INGQISTRVLGTTG 324
LL+Q+ K+ DFGLA+ + SDK + Q+++ V+ T
Sbjct: 163 LLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVV-TRW 221
Query: 325 YLAPEYASTGKLTTKS-DVYSYGVVLLELL----------TGRVPVDP 361
Y APE + T S D++S G + ELL T R P+ P
Sbjct: 222 YRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFP 269
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 269 FLHEHATPPVIHRDFKCSNV-LLDQNF---RAKVTDFGLAKMVSDKINGQISTRVLGTTG 324
+LH T + H D K N+ LLD+N K+ DFGLA + D + + + GT
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPE 183
Query: 325 YLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
++APE + L ++D++S GV+ LL+G P
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 21/192 (10%)
Query: 180 VAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQ 239
+ A+K + R K E R ++ S H P +V H ++ EY G L +
Sbjct: 46 LVAVKYIERGEKIDENVKREIINHRSLRH-PNIVRFKEVILTPTHLAIVMEYASGGELFE 104
Query: 240 HLHRHNNRYRPLDWR---TRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQN--F 294
+ + R+ + R +LI + A++ V HRD K N LLD +
Sbjct: 105 RIC-NAGRFSEDEARFFFQQLISGVSYCHAMQ---------VCHRDLKLENTLLDGSPAP 154
Query: 295 RAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTK-SDVYSYGVVLLELL 353
R K+ FG +K S ++ Q V GT Y+APE + K +DV+S GV L +L
Sbjct: 155 RLKICAFGYSK--SSVLHSQPKDTV-GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
Query: 354 TGRVPV-DPNRP 364
G P DP P
Sbjct: 212 VGAYPFEDPEEP 223
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 18/179 (10%)
Query: 184 KKLH-RDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLH 242
KKL RD ++ ER E + +L P +V L +++ L+ + + G L + +
Sbjct: 42 KKLSARDFQKLER----EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI- 96
Query: 243 RHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA---KVT 299
Y D + L+ ++ + H + ++HR+ K N+LL + K+
Sbjct: 97 VAREFYSEADASHCIQQILE---SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLA 150
Query: 300 DFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
DFGLA V+D + GT GYL+PE + D+++ GV+L LL G P
Sbjct: 151 DFGLAIEVND---SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 269 FLHEHATPPVIHRDFKCSNV-LLDQNF---RAKVTDFGLAKMVSDKINGQISTRVLGTTG 324
+LH T + H D K N+ LLD+N K+ DFGLA + D + + + GT
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPE 183
Query: 325 YLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
++APE + L ++D++S GV+ LL+G P
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 18/179 (10%)
Query: 184 KKLH-RDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLH 242
KKL RD ++ ER E + +L P +V L +++ L+ + + G L + +
Sbjct: 42 KKLSARDFQKLER----EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI- 96
Query: 243 RHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA---KVT 299
Y D + L+ ++ + H + ++HR+ K N+LL + K+
Sbjct: 97 VAREFYSEADASHCIQQILE---SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLA 150
Query: 300 DFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
DFGLA V+D + GT GYL+PE + D+++ GV+L LL G P
Sbjct: 151 DFGLAIEVND---SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 269 FLHEHATPPVIHRDFKCSNV-LLDQNF---RAKVTDFGLAKMVSDKINGQISTRVLGTTG 324
+LH T + H D K N+ LLD+N K+ DFGLA + D + + + GT
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPE 183
Query: 325 YLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
++APE + L ++D++S GV+ LL+G P
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 18/195 (9%)
Query: 171 YKGVL-SDGTVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCAD--QNHRLL 227
+KG + V + K+ ++ R F E L P ++ +LG C H L
Sbjct: 27 WKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86
Query: 228 ISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHR-DFKCS 286
I+ + P G+L LH N +D + ALD A FL H P+I R
Sbjct: 87 ITHWXPYGSLYNVLHEGTNFV--VDQSQAVKFALDXARGXAFL--HTLEPLIPRHALNSR 142
Query: 287 NVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTK---SDVY 343
+V +D++ A+++ + K + Q R ++APE T +D +
Sbjct: 143 SVXIDEDXTARISXADV------KFSFQSPGRXYA-PAWVAPEALQKKPEDTNRRSADXW 195
Query: 344 SYGVVLLELLTGRVP 358
S+ V+L EL+T VP
Sbjct: 196 SFAVLLWELVTREVP 210
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 18/179 (10%)
Query: 184 KKLH-RDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLH 242
KKL RD ++ ER E + +L P +V L +++ L+ + + G L + +
Sbjct: 41 KKLSARDFQKLER----EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI- 95
Query: 243 RHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA---KVT 299
Y D + L+ ++ + H + ++HR+ K N+LL + K+
Sbjct: 96 VAREFYSEADASHCIQQILE---SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLA 149
Query: 300 DFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
DFGLA V+D + GT GYL+PE + D+++ GV+L LL G P
Sbjct: 150 DFGLAIEVND---SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 269 FLHEHATPPVIHRDFKCSNV-LLDQNF---RAKVTDFGLAKMVSDKINGQISTRVLGTTG 324
+LH T + H D K N+ LLD+N K+ DFGLA + D + + + GT
Sbjct: 130 YLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPE 183
Query: 325 YLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
++APE + L ++D++S GV+ LL+G P
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 18/179 (10%)
Query: 184 KKLH-RDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLH 242
KKL RD ++ ER E + +L P +V L +++ L+ + + G L + +
Sbjct: 65 KKLSARDFQKLER----EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI- 119
Query: 243 RHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA---KVT 299
Y D + L+ ++ + H + ++HR+ K N+LL + K+
Sbjct: 120 VAREFYSEADASHCIQQILE---SIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLA 173
Query: 300 DFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
DFGLA V+D + GT GYL+PE + D+++ GV+L LL G P
Sbjct: 174 DFGLAIEVND---SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 262 DCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLG 321
D +AL LH ++H D K +N+ L R K+ DFGL + G++ G
Sbjct: 165 DTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE---G 218
Query: 322 TTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
Y+APE G T +DV+S G+ +LE+
Sbjct: 219 DPRYMAPELLQ-GSYGTAADVFSLGLTILEV 248
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 278 VIHRDFKCSNVLLDQNFRA---KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTG 334
V+HRD K N+LL + K+ DFGLA V + Q GT GYL+PE
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG--DQQAWFGFAGTPGYLSPEVLRKE 181
Query: 335 KLTTKSDVYSYGVVLLELLTGRVP 358
D+++ GV+L LL G P
Sbjct: 182 AYGKPVDIWACGVILYILLVGYPP 205
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 270 LHEHATPPVIHRDFKCSNVLLDQNFRA---KVTDFGLAKMVSDKINGQISTRVLGTTGYL 326
+H+H ++HRD K N+LL + K+ DFGLA V + GT GYL
Sbjct: 146 IHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG--FAGTPGYL 200
Query: 327 APEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
+PE D+++ GV+L LL G P
Sbjct: 201 SPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRA--KVTDFGLAKMVSDKINGQISTRVLGTT 323
L+ LH++ +IH D K N+LL Q R+ KV DFG + ++ I +R
Sbjct: 212 CLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRF---- 264
Query: 324 GYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHV 369
Y APE + D++S G +L ELLTG P+ P G+ +
Sbjct: 265 -YRAPEVILGARYGMPIDMWSLGCILAELLTG-YPLLPGEDEGDQL 308
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRA--KVTDFGLAKMVSDKINGQISTRVLGTT 323
L+ LH++ +IH D K N+LL Q R+ KV DFG + ++ I +R
Sbjct: 212 CLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF---- 264
Query: 324 GYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHV 369
Y APE + D++S G +L ELLTG P+ P G+ +
Sbjct: 265 -YRAPEVILGARYGMPIDMWSLGCILAELLTG-YPLLPGEDEGDQL 308
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 266 ALEFLHEHATPPVIHRDFKCSNVLLDQNFRA--KVTDFGLAKMVSDKINGQISTRVLGTT 323
L+ LH++ +IH D K N+LL Q R+ KV DFG + ++ I +R
Sbjct: 212 CLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF---- 264
Query: 324 GYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHV 369
Y APE + D++S G +L ELLTG P+ P G+ +
Sbjct: 265 -YRAPEVILGARYGMPIDMWSLGCILAELLTG-YPLLPGEDEGDQL 308
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 11/94 (11%)
Query: 269 FLHEHATPPVIHRDFKCSNVLLDQNF---RAKVTDFGLAKMVSDKINGQISTR-VLGTTG 324
+LH++ ++H D K N+LL + K+ DFG+++ KI R ++GT
Sbjct: 146 YLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSR----KIGHACELREIMGTPE 198
Query: 325 YLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
YLAPE + +TT +D+++ G++ LLT P
Sbjct: 199 YLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 226 LLISEYMPNGTLQQHLHR----HNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHR 281
++I +M +G L L N PL R ++ + C M E+L ++ IHR
Sbjct: 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM--EYL---SSRNFIHR 161
Query: 282 DFKCSNVLLDQNFRAKVTDFGLAKMV--SDKINGQISTRVLGTTGYLAPEYASTGKLTTK 339
D N +L ++ V DFGL++ + D ++++ +LA E + T
Sbjct: 162 DLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL--PVKWLALESLADNLYTVH 219
Query: 340 SDVYSYGVVLLELLT-GRVP 358
SDV+++GV + E++T G+ P
Sbjct: 220 SDVWAFGVTMWEIMTRGQTP 239
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 11/180 (6%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTL 237
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q + E+ +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKS---LEEFQDVYIV 107
Query: 238 QQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAK 297
+ + + ++ ++ + L M + H H+ +IHRD K SN+++ + K
Sbjct: 108 MELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG-IIHRDLKPSNIVVKSDATLK 166
Query: 298 VTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRV 357
+ DFGLA+ + T + T Y APE D++S GV++ E++ G V
Sbjct: 167 ILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGV 223
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 11/180 (6%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTL 237
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q + E+ +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKS---LEEFQDVYIV 107
Query: 238 QQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAK 297
+ + + ++ ++ + L M + H H+ +IHRD K SN+++ + K
Sbjct: 108 MELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG-IIHRDLKPSNIVVKSDATLK 166
Query: 298 VTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRV 357
+ DFGLA+ + T + T Y APE D++S GV++ E++ G V
Sbjct: 167 ILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGV 223
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 278 VIHRDFKCSNVLLDQNFRA---KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTG 334
++HRD K N+LL + K+ DFGLA V + Q GT GYL+PE
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQG--DQQAWFGFAGTPGYLSPEVLRKD 181
Query: 335 KLTTKSDVYSYGVVLLELLTGRVP 358
D+++ GV+L LL G P
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPP 205
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 278 VIHRDFKCSNVLLDQNFRA---KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTG 334
++HRD K N+LL + K+ DFGLA V + Q GT GYL+PE
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQG--DQQAWFGFAGTPGYLSPEVLRKD 181
Query: 335 KLTTKSDVYSYGVVLLELLTGRVP 358
D+++ GV+L LL G P
Sbjct: 182 PYGKPVDMWACGVILYILLVGYPP 205
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 21/185 (11%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQN-----HRLLISEYM 232
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q + I +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 233 PNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQ 292
+ L Q + + R + L+ + C + H H+ +IHRD K SN+++
Sbjct: 111 MDANLSQVIQMELDHER----MSYLLYQMLCGIK----HLHSAG-IIHRDLKPSNIVVKS 161
Query: 293 NFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
+ K+ DFGLA+ + T + T Y APE D++S G ++ E+
Sbjct: 162 DATLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 353 LTGRV 357
+ G V
Sbjct: 219 IKGGV 223
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 21/185 (11%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQN-----HRLLISEYM 232
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q + I +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 233 PNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQ 292
+ L Q + + R + L+ + C + H H+ +IHRD K SN+++
Sbjct: 111 MDANLSQVIQMELDHER----MSYLLYQMLCGIK----HLHSAG-IIHRDLKPSNIVVKS 161
Query: 293 NFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
+ K+ DFGLA+ + T + T Y APE D++S G ++ E+
Sbjct: 162 DCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 353 LTGRV 357
+ G V
Sbjct: 219 IKGGV 223
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 21/185 (11%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQN-----HRLLISEYM 232
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q + I +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 233 PNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQ 292
+ L Q + + R + L+ + C + H H+ +IHRD K SN+++
Sbjct: 111 MDANLSQVIQMELDHER----MSYLLYQMLCGIK----HLHSAG-IIHRDLKPSNIVVKS 161
Query: 293 NFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
+ K+ DFGLA+ + T + T Y APE D++S G ++ E+
Sbjct: 162 DATLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 353 LTGRV 357
+ G V
Sbjct: 219 IKGGV 223
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 28/202 (13%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQ------NHRLLISEY 231
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q L+ E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 232 MPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD 291
M + L Q + + R + L+ + C + H H+ +IHRD K SN+++
Sbjct: 111 M-DANLXQVIQMELDHER----MSYLLYQMLCGIK----HLHSAG-IIHRDLKPSNIVVK 160
Query: 292 QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLE 351
+ K+ DFGLA+ + T + T Y APE D++S G ++ E
Sbjct: 161 SDXTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 352 LLTGRVPVDPNRPPGEHVLVSW 373
++ ++ PG + W
Sbjct: 218 MVRHKILF-----PGRDYIDQW 234
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 9/180 (5%)
Query: 179 TVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQ 238
T +K L + + +F ++S+L LV G C + +L+ E++ G+L
Sbjct: 41 TEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLD 100
Query: 239 QHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKV 298
+L ++ N L W +L +A A A+ FL E+ +IH + N+LL + K
Sbjct: 101 TYLKKNKNCINIL-W--KLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKT 154
Query: 299 TDFGLAKMVSDKINGQISTR--VLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELLTG 355
+ K+ I+ + + + ++ PE K L +D +S+G L E+ +G
Sbjct: 155 GNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 87/205 (42%), Gaps = 45/205 (21%)
Query: 185 KLHRDGKQRERAFRMEVDLLSRLHSPQL-----VELLGYCADQNHRLLISEYMPNG-TLQ 238
K+ R+ K+ R+ ++E D+L ++ + + V+ G +H LI E P G +L
Sbjct: 66 KVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFE--PLGPSLY 123
Query: 239 QHLHRHN-NRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD------ 291
+ + R+N N + D I L C L+ L+ + H D K N+LLD
Sbjct: 124 EIITRNNYNGFHIED------IKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEK 177
Query: 292 --------------QNFRAKVT-----DFGLAKMVSDKINGQISTRVLGTTGYLAPEYAS 332
Q +R K T DFG A SD I+TR Y APE
Sbjct: 178 SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTR-----QYRAPEVIL 232
Query: 333 TGKLTTKSDVYSYGVVLLELLTGRV 357
SD++S+G VL EL TG +
Sbjct: 233 NLGWDVSSDMWSFGCVLAELYTGSL 257
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 82/187 (43%), Gaps = 20/187 (10%)
Query: 178 GTVAAIKKLHRDGKQRERAFRME-VDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT 236
G A+KK+ R FR E + + L SP++V L G + + E + G+
Sbjct: 118 GFQCAVKKV------RLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGS 171
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAM-ALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
L Q + P D R + L A+ LE+LH ++H D K NVLL +
Sbjct: 172 LGQLVKEQG--CLPED---RALYYLGQALEGLEYLHSRR---ILHGDVKADNVLLSSDGS 223
Query: 296 -AKVTDFGLAKMVS-DKINGQISTR--VLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLE 351
A + DFG A + D + + T + GT ++APE K DV+S ++L
Sbjct: 224 HAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLH 283
Query: 352 LLTGRVP 358
+L G P
Sbjct: 284 MLNGCHP 290
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 197 FRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTR 256
F EV+ + L L+ L G ++ ++E P G+L L +H + L +R
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSR 125
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMV---SDKING 313
A+ A + +L IHRD N+LL K+ DFGL + + D
Sbjct: 126 --YAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVM 180
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
Q +V + APE T + SD + +GV L E+ T
Sbjct: 181 QEHRKV--PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 11/180 (6%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTL 237
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q + E+ +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKS---LEEFQDVYIV 107
Query: 238 QQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAK 297
+ + + ++ ++ + L M + H H+ +IHRD K SN+++ + K
Sbjct: 108 MELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG-IIHRDLKPSNIVVKSDATLK 166
Query: 298 VTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRV 357
+ DFGLA+ + T + T Y APE D++S G ++ E++ G V
Sbjct: 167 ILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 197 FRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTR 256
F EV+ + L L+ L G ++ ++E P G+L L +H + L +R
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSR 125
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMV---SDKING 313
A+ A + +L IHRD N+LL K+ DFGL + + D
Sbjct: 126 --YAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 180
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
Q +V + APE T + SD + +GV L E+ T
Sbjct: 181 QEHRKV--PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 9/180 (5%)
Query: 179 TVAAIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQ 238
T +K L + + +F ++S+L LV G C + +L+ E++ G+L
Sbjct: 41 TEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLD 100
Query: 239 QHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKV 298
+L ++ N L W +L +A A A+ FL E+ +IH + N+LL + K
Sbjct: 101 TYLKKNKNCINIL-W--KLEVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKT 154
Query: 299 TDFGLAKMVSDKINGQISTR--VLGTTGYLAPEYASTGK-LTTKSDVYSYGVVLLELLTG 355
+ K+ I+ + + + ++ PE K L +D +S+G L E+ +G
Sbjct: 155 GNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 21/185 (11%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQN-----HRLLISEYM 232
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q + I +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 233 PNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQ 292
+ L Q + + R + L+ + C + H H+ +IHRD K SN+++
Sbjct: 111 MDANLCQVIQMELDHER----MSYLLYQMLCGIK----HLHSAG-IIHRDLKPSNIVVKS 161
Query: 293 NFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
+ K+ DFGLA+ + T + T Y APE D++S G ++ E+
Sbjct: 162 DCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 353 LTGRV 357
+ G V
Sbjct: 219 IKGGV 223
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 21/185 (11%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQN-----HRLLISEYM 232
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q + I +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 233 PNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQ 292
+ L Q + + R + L+ + C + H H+ +IHRD K SN+++
Sbjct: 111 MDANLCQVIQMELDHER----MSYLLYQMLCGIK----HLHSAG-IIHRDLKPSNIVVKS 161
Query: 293 NFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
+ K+ DFGLA+ + T + T Y APE D++S G ++ E+
Sbjct: 162 DCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 353 LTGRV 357
+ G V
Sbjct: 219 IKGGV 223
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 20/184 (10%)
Query: 178 GTVAAIKKLHRDGKQRERAFRME-VDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT 236
G A+KK+ R FR E + + L SP++V L G + + E + G+
Sbjct: 99 GFQCAVKKV------RLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGS 152
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAM-ALEFLHEHATPPVIHRDFKCSNVLLDQNFR 295
L Q + P D R + L A+ LE+LH ++H D K NVLL +
Sbjct: 153 LGQLVKEQG--CLPED---RALYYLGQALEGLEYLHSRR---ILHGDVKADNVLLSSDGS 204
Query: 296 -AKVTDFGLAKMVS-DKINGQISTR--VLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLE 351
A + DFG A + D + + T + GT ++APE K DV+S ++L
Sbjct: 205 HAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLH 264
Query: 352 LLTG 355
+L G
Sbjct: 265 MLNG 268
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 14/186 (7%)
Query: 180 VAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT 236
+ A+K++ D A R E+ LL L +V L L+ E+ +
Sbjct: 29 IVALKRVRLDDDDEGVPSSALR-EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQD 86
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
L+++ N P ++ L L L F H V+HRD K N+L+++N
Sbjct: 87 LKKYFDSCNGDLDPEIVKSFLFQLLK---GLGFCHSRN---VLHRDLKPQNLLINRNGEL 140
Query: 297 KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL-TTKSDVYSYGVVLLELLTG 355
K+ DFGLA+ + + V T Y P+ KL +T D++S G + EL
Sbjct: 141 KLADFGLARAFGIPVRCYSAEVV--TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANA 198
Query: 356 RVPVDP 361
P+ P
Sbjct: 199 ARPLFP 204
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 21/185 (11%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQN-----HRLLISEYM 232
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q + I +
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 111
Query: 233 PNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQ 292
+ L Q + + R + L+ + C + H H+ +IHRD K SN+++
Sbjct: 112 MDANLCQVIQMELDHER----MSYLLYQMLCGIK----HLHSAG-IIHRDLKPSNIVVKS 162
Query: 293 NFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
+ K+ DFGLA+ + T + T Y APE D++S G ++ E+
Sbjct: 163 DCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 219
Query: 353 LTGRV 357
+ G V
Sbjct: 220 IKGGV 224
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 197 FRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTR 256
F EV+ + L L+ L G ++ ++E P G+L L +H + L +R
Sbjct: 62 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSR 119
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMV---SDKING 313
A+ A + +L IHRD N+LL K+ DFGL + + D
Sbjct: 120 --YAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 174
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
Q +V + APE T + SD + +GV L E+ T
Sbjct: 175 QEHRKV--PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 30/180 (16%)
Query: 199 MEVDLLSRLHS-PQLVELLGYCADQNHRLL-ISEYMPNGTLQQHLHRHNNRYRPLDWRTR 256
ME+ LL+ P ++ YC++ R L I+ + N LQ + N L +
Sbjct: 75 MEIKLLTESDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKE 132
Query: 257 L-IIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD-------------QNFRAKVTDFG 302
I+L +A H H+ +IHRD K N+L+ +N R ++DFG
Sbjct: 133 YNPISLLRQIASGVAHLHSLK-IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 303 LAKMVSDKINGQISTRV-----LGTTGYLAPEY---ASTGKLTTKSDVYSYGVVLLELLT 354
L K + +GQ R GT+G+ APE ++ +LT D++S G V +L+
Sbjct: 192 LCKKLD---SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 30/180 (16%)
Query: 199 MEVDLLSRLHS-PQLVELLGYCADQNHRLL-ISEYMPNGTLQQHLHRHNNRYRPLDWRTR 256
ME+ LL+ P ++ YC++ R L I+ + N LQ + N L +
Sbjct: 75 MEIKLLTESDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKE 132
Query: 257 L-IIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD-------------QNFRAKVTDFG 302
I+L +A H H+ +IHRD K N+L+ +N R ++DFG
Sbjct: 133 YNPISLLRQIASGVAHLHSLK-IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 303 LAKMVSDKINGQISTRV-----LGTTGYLAPEY---ASTGKLTTKSDVYSYGVVLLELLT 354
L K + +GQ R GT+G+ APE ++ +LT D++S G V +L+
Sbjct: 192 LCKKLD---SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 13/133 (9%)
Query: 199 MEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT-LQQHLHRHNNRYRPL-DWRTR 256
+E+ +LSR+ ++++L +Q L+ E +G L + RH PL + R
Sbjct: 78 LEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFR 137
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQIS 316
+++ A+ +L +IHRD K N+++ ++F K+ DFG A + G++
Sbjct: 138 QLVS-----AVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE---RGKLF 186
Query: 317 TRVLGTTGYLAPE 329
GT Y APE
Sbjct: 187 YTFCGTIEYCAPE 199
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 21/185 (11%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQN-----HRLLISEYM 232
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q + I +
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 233 PNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQ 292
+ L Q + + R + L+ + C + H H+ +IHRD K SN+++
Sbjct: 111 MDANLCQVIQMELDHER----MSYLLYQMLCGIK----HLHSAG-IIHRDLKPSNIVVKS 161
Query: 293 NFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
+ K+ DFGLA+ + T + T Y APE D++S G ++ E+
Sbjct: 162 DCTLKILDFGLARTAGTSF---MMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 353 LTGRV 357
+ G V
Sbjct: 219 IKGGV 223
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 28/202 (13%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQ------NHRLLISEY 231
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q L+ E
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 148
Query: 232 MPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD 291
M + L Q + + R + L+ + C + H H+ +IHRD K SN+++
Sbjct: 149 M-DANLCQVIQMELDHER----MSYLLYQMLCGIK----HLHSAG-IIHRDLKPSNIVVK 198
Query: 292 QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLE 351
+ K+ DFGLA+ + T + T Y APE D++S G ++ E
Sbjct: 199 SDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 255
Query: 352 LLTGRVPVDPNRPPGEHVLVSW 373
++ ++ PG + W
Sbjct: 256 MVRHKILF-----PGRDYIDQW 272
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 197 FRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTR 256
F EV+ + L L+ L G ++ ++E P G+L L +H + L +R
Sbjct: 58 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSR 115
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMV---SDKING 313
A+ A + +L IHRD N+LL K+ DFGL + + D
Sbjct: 116 --YAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 170
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
Q +V + APE T + SD + +GV L E+ T
Sbjct: 171 QEHRKV--PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 197 FRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTR 256
F EV+ + L L+ L G ++ ++E P G+L L +H + L +R
Sbjct: 62 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSR 119
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMV---SDKING 313
A+ A + +L + IHRD N+LL K+ DFGL + + D
Sbjct: 120 --YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 174
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
Q +V + APE T + SD + +GV L E+ T
Sbjct: 175 QEHRKV--PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 197 FRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTR 256
F EV+ + L L+ L G ++ ++E P G+L L +H + L +R
Sbjct: 58 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSR 115
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMV---SDKING 313
A+ A + +L IHRD N+LL K+ DFGL + + D
Sbjct: 116 --YAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVM 170
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
Q +V + APE T + SD + +GV L E+ T
Sbjct: 171 QEHRKV--PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 28/202 (13%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQ------NHRLLISEY 231
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q L+ E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 232 MPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD 291
M + L Q + + R + L+ + C + H H+ +IHRD K SN+++
Sbjct: 111 M-DANLCQVIQMELDHER----MSYLLYQMLCGIK----HLHSAG-IIHRDLKPSNIVVK 160
Query: 292 QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLE 351
+ K+ DFGLA+ + T + T Y APE D++S G ++ E
Sbjct: 161 SDXTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 352 LLTGRVPVDPNRPPGEHVLVSW 373
++ ++ PG + W
Sbjct: 218 MVRHKILF-----PGRDYIDQW 234
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 28/202 (13%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQ------NHRLLISEY 231
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q L+ E
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 148
Query: 232 MPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD 291
M + L Q + + R + L+ + C + H H+ +IHRD K SN+++
Sbjct: 149 M-DANLCQVIQMELDHER----MSYLLYQMLCGIK----HLHSAG-IIHRDLKPSNIVVK 198
Query: 292 QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLE 351
+ K+ DFGLA+ + T + T Y APE D++S G ++ E
Sbjct: 199 SDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 255
Query: 352 LLTGRVPVDPNRPPGEHVLVSW 373
++ ++ PG + W
Sbjct: 256 MVRHKILF-----PGRDYIDQW 272
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 197 FRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTR 256
F EV+ + L L+ L G ++ ++E P G+L L +H + L +R
Sbjct: 58 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSR 115
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMV---SDKING 313
A+ A + +L + IHRD N+LL K+ DFGL + + D
Sbjct: 116 --YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 170
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLT 354
Q +V + APE T + SD + +GV L E+ T
Sbjct: 171 QEHRKV--PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 233
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE-YASTGKL 336
V+HRD K N+L+++ K+ DFGLA+ I + T + T Y AP+ + K
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFG--IPVRKYTHEIVTLWYRAPDVLMGSKKY 178
Query: 337 TTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVL 370
+T D++S G + E++ G P+ P + ++
Sbjct: 179 STTIDIWSVGCIFAEMVNG-TPLFPGVSEADQLM 211
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 28/202 (13%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQ------NHRLLISEY 231
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q L+ E
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 111
Query: 232 MPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD 291
M + L Q + + R + L+ + C + H H+ +IHRD K SN+++
Sbjct: 112 M-DANLCQVIQMELDHER----MSYLLYQMLCGIK----HLHSAG-IIHRDLKPSNIVVK 161
Query: 292 QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLE 351
+ K+ DFGLA+ + T + T Y APE D++S G ++ E
Sbjct: 162 SDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 218
Query: 352 LLTGRVPVDPNRPPGEHVLVSW 373
++ ++ PG + W
Sbjct: 219 MVRHKILF-----PGRDYIDQW 235
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 28/202 (13%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQ------NHRLLISEY 231
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q L+ E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 232 MPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD 291
M + L Q + + R + L+ + C + H H+ +IHRD K SN+++
Sbjct: 111 M-DANLCQVIQMELDHER----MSYLLYQMLCGIK----HLHSAG-IIHRDLKPSNIVVK 160
Query: 292 QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLE 351
+ K+ DFGLA+ + T + T Y APE D++S G ++ E
Sbjct: 161 SDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 352 LLTGRVPVDPNRPPGEHVLVSW 373
++ ++ PG + W
Sbjct: 218 MVRHKILF-----PGRDYIDQW 234
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 28/202 (13%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQ------NHRLLISEY 231
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q L+ E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 232 MPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD 291
M + L Q + + R + L+ + C + H H+ +IHRD K SN+++
Sbjct: 111 M-DANLCQVIQMELDHER----MSYLLYQMLCGIK----HLHSAG-IIHRDLKPSNIVVK 160
Query: 292 QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLE 351
+ K+ DFGLA+ + T + T Y APE D++S G ++ E
Sbjct: 161 SDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 352 LLTGRVPVDPNRPPGEHVLVSW 373
++ ++ PG + W
Sbjct: 218 MVRHKILF-----PGRDYIDQW 234
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 219
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 218
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 205
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 206 HGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 219
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 28/202 (13%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQ------NHRLLISEY 231
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q L+ E
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 111
Query: 232 MPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD 291
M + L Q + + R + L+ + C + H H+ +IHRD K SN+++
Sbjct: 112 M-DANLCQVIQMELDHER----MSYLLYQMLCGIK----HLHSAG-IIHRDLKPSNIVVK 161
Query: 292 QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLE 351
+ K+ DFGLA+ + T + T Y APE D++S G ++ E
Sbjct: 162 SDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 218
Query: 352 LLTGRVPVDPNRPPGEHVLVSW 373
++ ++ PG + W
Sbjct: 219 MVRHKILF-----PGRDYIDQW 235
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 28/202 (13%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQ------NHRLLISEY 231
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q L+ E
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 104
Query: 232 MPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD 291
M + L Q + + R + L+ + C + H H+ +IHRD K SN+++
Sbjct: 105 M-DANLCQVIQMELDHER----MSYLLYQMLCGIK----HLHSAG-IIHRDLKPSNIVVK 154
Query: 292 QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLE 351
+ K+ DFGLA+ + T + T Y APE D++S G ++ E
Sbjct: 155 SDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 211
Query: 352 LLTGRVPVDPNRPPGEHVLVSW 373
++ ++ PG + W
Sbjct: 212 MVRHKILF-----PGRDYIDQW 228
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 218
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 28/202 (13%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQ------NHRLLISEY 231
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q L+ E
Sbjct: 51 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 109
Query: 232 MPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD 291
M + L Q + + R + L+ + C + H H+ +IHRD K SN+++
Sbjct: 110 M-DANLCQVIQMELDHER----MSYLLYQMLCGIK----HLHSAG-IIHRDLKPSNIVVK 159
Query: 292 QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLE 351
+ K+ DFGLA+ + T + T Y APE D++S G ++ E
Sbjct: 160 SDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 216
Query: 352 LLTGRVPVDPNRPPGEHVLVSW 373
++ ++ PG + W
Sbjct: 217 MVRHKILF-----PGRDYIDQW 233
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 28/202 (13%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQ------NHRLLISEY 231
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q L+ E
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 103
Query: 232 MPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD 291
M + L Q + + R + L+ + C + H H+ +IHRD K SN+++
Sbjct: 104 M-DANLCQVIQMELDHER----MSYLLYQMLCGIK----HLHSAG-IIHRDLKPSNIVVK 153
Query: 292 QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLE 351
+ K+ DFGLA+ + T + T Y APE D++S G ++ E
Sbjct: 154 SDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 210
Query: 352 LLTGRVPVDPNRPPGEHVLVSW 373
++ ++ PG + W
Sbjct: 211 MVRHKILF-----PGRDYIDQW 227
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 28/202 (13%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQ------NHRLLISEY 231
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q L+ E
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 104
Query: 232 MPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD 291
M + L Q + + R + L+ + C + H H+ +IHRD K SN+++
Sbjct: 105 M-DANLCQVIQMELDHER----MSYLLYQMLCGIK----HLHSAG-IIHRDLKPSNIVVK 154
Query: 292 QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLE 351
+ K+ DFGLA+ + T + T Y APE D++S G ++ E
Sbjct: 155 SDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 211
Query: 352 LLTGRVPVDPNRPPGEHVLVSW 373
++ ++ PG + W
Sbjct: 212 MVRHKILF-----PGRDYIDQW 228
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 206
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 205
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 206 HGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 206
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 225
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 226 HGRSAAVWSLGILLYDMVCGDIPFE 250
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 219
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 218
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 238
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 239 HGRSAAVWSLGILLYDMVCGDIPFE 263
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 233
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 191
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 17/204 (8%)
Query: 171 YKGV--LSDGTVA--AIKKLHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRL 226
YKG L+D VA I+ H +G A R EV LL L +V L +
Sbjct: 19 YKGKSKLTDNLVALKEIRLEHEEGAPC-TAIR-EVSLLKDLKHANIVTLHDIIHTEKSLT 76
Query: 227 LISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCS 286
L+ EY+ + L+Q+L N ++ + L + H V+HRD K
Sbjct: 77 LVFEYL-DKDLKQYLDDCGN---IINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQ 129
Query: 287 NVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE-YASTGKLTTKSDVYSY 345
N+L+++ K+ DFGLA+ S I + + T Y P+ + +T+ D++
Sbjct: 130 NLLINERGELKLADFGLARAKS--IPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGV 187
Query: 346 GVVLLELLTGRVPVDPNRPPGEHV 369
G + E+ TGR P+ P E +
Sbjct: 188 GCIFYEMATGR-PLFPGSTVEEQL 210
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 218
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 219 HGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 191
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 206
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 207 HGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 219
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 220 HGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 233
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 213
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 214 HGRSAAVWSLGILLYDMVCGDIPFE 238
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 189
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 190 HGRSAAVWSLGILLYDMVCGDIPFE 214
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 186
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 186
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 43/212 (20%)
Query: 171 YKGV-LSDGTVAAIKKLHRD----GKQRERAFR--MEVDLLSRLHS--PQLVELLGYCAD 221
Y G+ +SD AIK + +D + R MEV LL ++ S ++ LL +
Sbjct: 25 YSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 84
Query: 222 QNHRLLISEYMP-----------NGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFL 270
+ +LI E M G LQ+ L R W+ LE +
Sbjct: 85 PDSFVLILERMEPVQDLFDFITERGALQEELARS------FFWQV-----------LEAV 127
Query: 271 HEHATPPVIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE 329
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPE 183
Query: 330 YASTGKLTTKS-DVYSYGVVLLELLTGRVPVD 360
+ + +S V+S G++L +++ G +P +
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 191
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 192 HGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 190
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 191 HGRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE-YASTGKL 336
V+HRD K N+L+++ K+ DFGLA+ I + T + T Y AP+ + K
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFG--IPVRKYTHEVVTLWYRAPDVLMGSKKY 178
Query: 337 TTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVL 370
+T D++S G + E++ G P+ P + ++
Sbjct: 179 STTIDIWSVGCIFAEMVNG-APLFPGVSEADQLM 211
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 278 VIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPE-YASTGKL 336
V+HRD K N+L+++ K+ DFGLA+ I + T + T Y AP+ + K
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFG--IPVRKYTHEVVTLWYRAPDVLMGSKKY 178
Query: 337 TTKSDVYSYGVVLLELLTGRVPVDPNRPPGEHVL 370
+T D++S G + E++ G P+ P + ++
Sbjct: 179 STTIDIWSVGCIFAEMVNG-TPLFPGVSEADQLM 211
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 18/175 (10%)
Query: 194 ERAFRMEVDLLSRLHSPQLVELLG--YCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPL 251
E + E+ LL RL +++L+ Y ++ ++ EY G +Q+ L + P+
Sbjct: 50 EANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPV 108
Query: 252 ----DWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAKMV 307
+ +LI L E+LH ++H+D K N+LL K++ G+A+ +
Sbjct: 109 CQAHGYFCQLIDGL------EYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEAL 159
Query: 308 SDKINGQISTRVLGTTGYLAPEYASTGKLTT--KSDVYSYGVVLLELLTGRVPVD 360
G+ + PE A+ + K D++S GV L + TG P +
Sbjct: 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 21/185 (11%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQN-----HRLLISEYM 232
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q + I +
Sbjct: 54 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 112
Query: 233 PNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQ 292
+ L Q + + R + L+ + C + H H+ +IHRD K SN+++
Sbjct: 113 MDANLCQVIQMELDHER----MSYLLYQMLCGIK----HLHSAG-IIHRDLKPSNIVVKS 163
Query: 293 NFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
+ K+ DFGLA+ + + T Y APE D++S G ++ E+
Sbjct: 164 DCTLKILDFGLARTAGTSF---MMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 220
Query: 353 LTGRV 357
+ G V
Sbjct: 221 IKGGV 225
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 278 VIHRDFKCSNVLLDQN-FRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD K N+L+D N K+ DFG ++ D + T GT Y PE+ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRY 186
Query: 337 TTKS-DVYSYGVVLLELLTGRVPVD 360
+S V+S G++L +++ G +P +
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 39/170 (22%)
Query: 218 YCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPP 277
YC +N ++I+ MP + L N+ L ++ L+ AL+ +H+
Sbjct: 87 YCFRKNDHVVIA--MPYLEHESFLDILNS----LSFQEVREYMLNLFKALKRIHQFG--- 137
Query: 278 VIHRDFKCSNVLLDQNFRA-KVTDFGLAKMVSD-KIN----------------------- 312
++HRD K SN L ++ + + DFGLA+ D KI
Sbjct: 138 IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICL 197
Query: 313 ---GQISTRVLGTTGYLAPEYASTG-KLTTKSDVYSYGVVLLELLTGRVP 358
Q++ R GT G+ APE + TT D++S GV+ L LL+GR P
Sbjct: 198 SRRQQVAPRA-GTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 83/202 (41%), Gaps = 28/202 (13%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQ------NHRLLISEY 231
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q L+ E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 232 MPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD 291
M + L Q + LD + ++ LH +IHRD K SN+++
Sbjct: 111 M-DANLXQVIQME------LDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVK 160
Query: 292 QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLE 351
+ K+ DFGLA+ + T + T Y APE D++S G ++ E
Sbjct: 161 SDXTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 352 LLTGRVPVDPNRPPGEHVLVSW 373
++ ++ PG + W
Sbjct: 218 MVRHKILF-----PGRDYIDQW 234
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 18/169 (10%)
Query: 199 MEVDLLSRLHS----PQLVELLGYCADQNHRLLISEY-MPNGTLQQHLHRHNNRYRPLDW 253
+EV LL ++ + P ++ LL + Q +L+ E +P Q L + PL
Sbjct: 83 LEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLP----AQDLFDYITEKGPLGE 138
Query: 254 RTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD-QNFRAKVTDFGLAKMVSDKIN 312
A++ H V+HRD K N+L+D + AK+ DFG ++ D
Sbjct: 139 GPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALLHD--- 192
Query: 313 GQISTRVLGTTGYLAPEYASTGKL-TTKSDVYSYGVVLLELLTGRVPVD 360
+ T GT Y PE+ S + + V+S G++L +++ G +P +
Sbjct: 193 -EPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE 240
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 79/184 (42%), Gaps = 34/184 (18%)
Query: 199 MEVDLLSRLHS-PQLVELLGYCADQNHRLL-ISEYMPNGTLQQHLHRHNNRYRPLDWRTR 256
ME+ LL+ P ++ YC++ R L I+ + N LQ + N L +
Sbjct: 57 MEIKLLTESDDHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKE 114
Query: 257 L-IIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD-------------QNFRAKVTDFG 302
I+L +A H H+ +IHRD K N+L+ +N R ++DFG
Sbjct: 115 YNPISLLRQIASGVAHLHSLK-IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 303 LAKMVSDKINGQISTRV-----LGTTGYLAPEYASTG-------KLTTKSDVYSYGVVLL 350
L K + +GQ S R GT+G+ APE +LT D++S G V
Sbjct: 174 LCKKLD---SGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY 230
Query: 351 ELLT 354
+L+
Sbjct: 231 YILS 234
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 8/165 (4%)
Query: 197 FRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTR 256
+ E + L P +VELL + ++ E+M L + + +
Sbjct: 75 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 134
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQNFRAKVTDFGLAKMVSDKING 313
AL + H++ +IHRD K VLL + + K+ FG+A + + +G
Sbjct: 135 SHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE--SG 189
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
++ +GT ++APE DV+ GV+L LL+G +P
Sbjct: 190 LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 8/165 (4%)
Query: 197 FRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTR 256
+ E + L P +VELL + ++ E+M L + + +
Sbjct: 73 LKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132
Query: 257 LIIALDCAMALEFLHEHATPPVIHRDFKCSNVLL---DQNFRAKVTDFGLAKMVSDKING 313
AL + H++ +IHRD K VLL + + K+ FG+A + + +G
Sbjct: 133 SHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE--SG 187
Query: 314 QISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVP 358
++ +GT ++APE DV+ GV+L LL+G +P
Sbjct: 188 LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 83/202 (41%), Gaps = 28/202 (13%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQ------NHRLLISEY 231
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q L+ E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 232 MPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD 291
M + L Q + LD + ++ LH +IHRD K SN+++
Sbjct: 111 M-DANLXQVIQME------LDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVK 160
Query: 292 QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLE 351
+ K+ DFGLA+ + T + T Y APE D++S G ++ E
Sbjct: 161 SDXTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
Query: 352 LLTGRVPVDPNRPPGEHVLVSW 373
++ ++ PG + W
Sbjct: 218 MVRHKILF-----PGRDYIDQW 234
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 83/202 (41%), Gaps = 28/202 (13%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQ------NHRLLISEY 231
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q L+ E
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 103
Query: 232 MPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLD 291
M + L Q + LD + ++ LH +IHRD K SN+++
Sbjct: 104 M-DANLXQVIQME------LDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVK 153
Query: 292 QNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLE 351
+ K+ DFGLA+ + T + T Y APE D++S G ++ E
Sbjct: 154 SDXTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 210
Query: 352 LLTGRVPVDPNRPPGEHVLVSW 373
++ ++ PG + W
Sbjct: 211 MVRHKILF-----PGRDYIDQW 227
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 78/186 (41%), Gaps = 14/186 (7%)
Query: 180 VAAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGT 236
+ A+K++ D A R E+ LL L +V L L+ E+ +
Sbjct: 29 IVALKRVRLDDDDEGVPSSALR-EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQD 86
Query: 237 LQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRA 296
L+++ N P ++ L L L F H V+HRD K N+L+++N
Sbjct: 87 LKKYFDSCNGDLDPEIVKSFLFQLLK---GLGFCHSRN---VLHRDLKPQNLLINRNGEL 140
Query: 297 KVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL-TTKSDVYSYGVVLLELLTG 355
K+ +FGLA+ + + V T Y P+ KL +T D++S G + EL
Sbjct: 141 KLANFGLARAFGIPVRCYSAEVV--TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANA 198
Query: 356 RVPVDP 361
P+ P
Sbjct: 199 GRPLFP 204
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQN-----HRLLISEYM 232
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q + I +
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 104
Query: 233 PNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQ 292
+ L Q + + R + L+ + C + H H+ +IHRD K SN+++
Sbjct: 105 MDANLCQVIQMELDHER----MSYLLYQMLCGIK----HLHSAG-IIHRDLKPSNIVVKS 155
Query: 293 NFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
+ K+ DFGLA+ + T + T Y APE D++S G ++ E+
Sbjct: 156 DCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEM 212
Query: 353 LTGRVPVDPNRPPGEHVLVSW 373
+ ++ PG + W
Sbjct: 213 VCHKILF-----PGRDYIDQW 228
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 82/198 (41%), Gaps = 27/198 (13%)
Query: 173 GVLSDGTVAAIKKLHR---DGKQR---------ERAFRMEVDLLSRLHSPQLVEL----L 216
GV S+G AIK++ DG+ +R R E+ LL+ H P ++ L +
Sbjct: 41 GVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLR-EIRLLNHFHHPNILGLRDIFV 99
Query: 217 GYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATP 276
+ H+L + + L Q +H P + + L + L LHE
Sbjct: 100 HFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHIL---LGLHVLHEAG-- 154
Query: 277 PVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD N+LL N + DF LA+ + N T + Y APE K
Sbjct: 155 -VVHRDLHPGNILLADNNDITICDFNLAREDTADAN---KTHYVTHRWYRAPELVMQFKG 210
Query: 337 TTK-SDVYSYGVVLLELL 353
TK D++S G V+ E+
Sbjct: 211 FTKLVDMWSAGCVMAEMF 228
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 19/179 (10%)
Query: 186 LHRDGKQRERAFRMEVDLLSRLHSPQLVELLGYCADQNHRLLISEYMPNGTLQQHLHRHN 245
+ RD + + +AF+ EV + +V +G C H +I+ TL +
Sbjct: 65 IERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVV---R 121
Query: 246 NRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQNFRAKVTDFGLAK 305
+ LD IA + + +LH ++H+D K NV D N + +TDFGL
Sbjct: 122 DAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFS 177
Query: 306 MVSDKINGQISTRVLGTTGY---LAPEY-------ASTGKL--TTKSDVYSYGVVLLEL 352
+ G+ ++ G+ LAPE KL + SDV++ G + EL
Sbjct: 178 ISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 26/201 (12%)
Query: 181 AAIKKLHRDGKQR---ERAFRMEVDLLSRLHSPQLVELLGYCADQN-----HRLLISEYM 232
AIKKL R + + +RA+R E+ L+ ++ ++ LL Q + I +
Sbjct: 57 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 115
Query: 233 PNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATPPVIHRDFKCSNVLLDQ 292
+ L Q + + R + L+ + C + H H+ +IHRD K SN+++
Sbjct: 116 MDANLCQVIQMELDHER----MSYLLYQMLCGIK----HLHSAG-IIHRDLKPSNIVVKS 166
Query: 293 NFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEL 352
+ K+ DFGLA+ + T + T Y APE D++S G ++ E+
Sbjct: 167 DCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEM 223
Query: 353 LTGRVPVDPNRPPGEHVLVSW 373
+ ++ PG + W
Sbjct: 224 VCHKILF-----PGRDYIDQW 239
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 82/198 (41%), Gaps = 27/198 (13%)
Query: 173 GVLSDGTVAAIKKLHR---DGKQR---------ERAFRMEVDLLSRLHSPQLVEL----L 216
GV S+G AIK++ DG+ +R R E+ LL+ H P ++ L +
Sbjct: 41 GVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLR-EIRLLNHFHHPNILGLRDIFV 99
Query: 217 GYCADQNHRLLISEYMPNGTLQQHLHRHNNRYRPLDWRTRLIIALDCAMALEFLHEHATP 276
+ H+L + + L Q +H P + + L + L LHE
Sbjct: 100 HFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHIL---LGLHVLHEAG-- 154
Query: 277 PVIHRDFKCSNVLLDQNFRAKVTDFGLAKMVSDKINGQISTRVLGTTGYLAPEYASTGKL 336
V+HRD N+LL N + DF LA+ + N T + Y APE K
Sbjct: 155 -VVHRDLHPGNILLADNNDITICDFNLAREDTADAN---KTHYVTHRWYRAPELVMQFKG 210
Query: 337 TTK-SDVYSYGVVLLELL 353
TK D++S G V+ E+
Sbjct: 211 FTKLVDMWSAGCVMAEMF 228
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.131 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,560,874
Number of Sequences: 62578
Number of extensions: 479910
Number of successful extensions: 3692
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 214
Number of HSP's that attempted gapping in prelim test: 1650
Number of HSP's gapped (non-prelim): 1139
length of query: 457
length of database: 14,973,337
effective HSP length: 102
effective length of query: 355
effective length of database: 8,590,381
effective search space: 3049585255
effective search space used: 3049585255
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)