Query 012743
Match_columns 457
No_of_seqs 241 out of 1015
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 15:22:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012743.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012743hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hve_A Gigaxonin; ubiquitin, c 100.0 3.1E-35 1.1E-39 285.4 5.2 235 28-325 18-256 (256)
2 3i3n_A Kelch-like protein 11; 100.0 1.7E-34 5.8E-39 283.9 7.7 237 28-327 19-265 (279)
3 3htm_A Speckle-type POZ protei 99.9 3.6E-24 1.2E-28 194.5 10.6 144 23-188 16-160 (172)
4 4eoz_A Speckle-type POZ protei 99.9 8.3E-25 2.8E-29 193.4 5.1 133 23-172 7-140 (145)
5 2if5_A Zinc finger and BTB dom 99.9 3.4E-23 1.2E-27 178.4 10.0 107 29-143 13-120 (120)
6 3b84_A Zinc finger and BTB dom 99.9 1.8E-23 6.2E-28 180.7 7.2 106 29-145 12-117 (119)
7 2vpk_A Myoneurin; transcriptio 99.9 6.2E-23 2.1E-27 176.0 9.9 105 29-144 10-116 (116)
8 2vkp_A BTB/POZ domain-containi 99.9 4.2E-23 1.4E-27 174.5 8.7 102 35-145 2-108 (109)
9 1r29_A B-cell lymphoma 6 prote 99.9 8.6E-23 2.9E-27 177.8 10.6 108 28-144 16-125 (127)
10 1buo_A POZ domain, protein (pr 99.9 1.1E-22 3.7E-27 176.1 10.4 106 28-145 15-120 (121)
11 2z8h_A Transcription regulator 99.9 8.1E-23 2.8E-27 181.0 8.8 115 25-148 20-135 (138)
12 2yy9_A Zinc finger and BTB dom 99.9 3.8E-23 1.3E-27 182.7 6.0 108 28-146 12-119 (135)
13 2ppi_A Gigaxonin; BTB domain, 99.9 8.6E-23 3E-27 182.7 7.2 108 28-143 34-144 (144)
14 2q81_A MIZ-1 protein; BTB/POZ 99.9 9.6E-23 3.3E-27 176.1 7.0 103 29-143 15-117 (119)
15 3ga1_A Nucleus accumbens-assoc 99.9 6.8E-23 2.3E-27 179.3 5.3 107 28-145 20-127 (129)
16 3ohu_A Transcription regulator 99.9 6.3E-23 2.2E-27 178.1 4.4 106 28-142 19-125 (125)
17 2ihc_A Transcription regulator 99.9 1.1E-22 3.8E-27 176.9 5.2 110 24-143 12-123 (124)
18 3m5b_A Zinc finger and BTB dom 99.8 8.9E-22 3.1E-26 171.0 7.5 95 35-145 24-118 (119)
19 3hqi_A Speckle-type POZ protei 99.8 1.9E-21 6.6E-26 193.4 11.0 127 28-171 161-288 (312)
20 3fkc_A Transcriptional regulat 99.8 2.8E-20 9.6E-25 160.3 8.6 94 28-127 18-112 (116)
21 2ast_A S-phase kinase-associat 99.5 1.7E-14 5.8E-19 131.3 7.9 94 44-146 3-126 (159)
22 4ajy_C Transcription elongatio 99.3 3.7E-12 1.3E-16 106.6 7.8 79 44-125 4-97 (97)
23 1fs1_B SKP1, cyclin A/CDK2-ass 99.2 2.1E-11 7.1E-16 108.9 8.0 91 44-146 4-121 (141)
24 2p1m_A SKP1-like protein 1A; F 99.0 4.2E-11 1.4E-15 109.1 1.4 92 44-146 6-125 (160)
25 1hv2_A Elongin C, ELC1; protei 98.5 2.6E-07 8.9E-12 77.5 6.9 80 43-125 5-99 (99)
26 2fnj_C Transcription elongatio 98.4 2.3E-07 7.8E-12 77.4 5.8 79 44-125 3-96 (96)
27 3v7d_A Suppressor of kinetocho 98.4 6.8E-07 2.3E-11 82.0 8.4 95 43-146 8-133 (169)
28 2eqx_A Kelch repeat and BTB do 98.4 6.5E-08 2.2E-12 81.7 1.1 91 156-289 9-99 (105)
29 1vcb_B Protein (elongin C); tu 97.9 1.2E-05 4.2E-10 68.8 5.3 80 43-125 18-112 (112)
30 3drz_A BTB/POZ domain-containi 97.9 3.8E-05 1.3E-09 65.0 8.3 93 43-144 7-106 (107)
31 3drx_A BTB/POZ domain-containi 96.7 0.0028 9.5E-08 59.6 7.1 94 43-145 13-113 (202)
32 3kvt_A Potassium channel prote 96.1 0.0019 6.5E-08 55.4 1.9 82 44-128 7-92 (115)
33 1s1g_A Potassium voltage-gated 95.1 0.019 6.6E-07 49.7 4.7 80 42-127 13-98 (124)
34 1t1d_A Protein (potassium chan 94.9 0.022 7.4E-07 47.6 4.2 81 44-127 3-88 (100)
35 1nn7_A Potassium channel KV4.2 94.1 0.016 5.3E-07 48.8 1.4 85 44-139 2-92 (105)
36 2nz0_B Potassium voltage-gated 94.0 0.024 8.3E-07 50.2 2.6 82 40-127 33-120 (140)
37 1pd7_B MAD1; PAH2, SIN3, eukar 72.9 1.1 3.8E-05 28.1 0.8 16 111-126 3-18 (26)
38 2r9r_B Paddle chimera voltage 70.4 4.4 0.00015 42.7 5.3 84 42-128 52-140 (514)
39 1vjh_A BET V I allergen family 49.4 7.9 0.00027 32.7 2.2 33 403-446 90-122 (122)
40 2eqx_A Kelch repeat and BTB do 45.8 18 0.00061 29.4 3.8 36 105-146 5-40 (105)
41 3htm_A Speckle-type POZ protei 32.3 48 0.0016 28.3 4.6 46 92-146 119-164 (172)
42 3b0b_C CENP-X, centromere prot 23.0 58 0.002 25.8 3.1 43 349-404 6-48 (81)
43 4dra_E Centromere protein X; D 20.2 52 0.0018 26.3 2.2 43 349-404 10-52 (84)
No 1
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=100.00 E-value=3.1e-35 Score=285.45 Aligned_cols=235 Identities=12% Similarity=0.123 Sum_probs=181.4
Q ss_pred HHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCC-C--CCCCceEecCCCCCCHHHHHHHHHHHhCC
Q 012743 28 MKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVS-S--EADLSVIEIPDVPGGAEAFELAAKFCYGI 104 (457)
Q Consensus 28 ~~~~~~~~r~~~~~~DV~l~V~~~~F~~HK~vLaa~S~yfr~mf~~~-~--e~~~~~v~L~~~pGg~~~felvl~FcYt~ 104 (457)
..++.+.++.++.+|||+|.|||+.|++||.+|+++|+||++||+++ . ++...+|.|++++ +++|+.+++|+|||
T Consensus 18 l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~--~~~f~~ll~~~Yt~ 95 (256)
T 3hve_A 18 LLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSG 95 (256)
T ss_dssp HHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCC--HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCC--HHHHHHHHhhccCC
Confidence 44567789999999999999999999999999999999999999986 3 5677899999995 99999999999999
Q ss_pred ccccCchhHhhHHHHHhhhccccccccchHHHHHHHHHHHHhhhchhhHHHHHhhhhchHHHHHHhchhhHHHHHHHHHH
Q 012743 105 NFEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVALTSLTGAVTVLHKSQGLLPIAEKVKLVGQCIDAIAYIA 184 (457)
Q Consensus 105 ~i~it~~NV~~L~~AA~~Lqm~e~~~~~NL~~~ce~FL~~~v~~sw~~~i~~l~~C~~l~~~Ae~~~iv~rCidsLa~ka 184 (457)
++.++.+||..++.||++|||++ |++.|++||.+.+ ...||.+++.+|+.|++ +.|..++
T Consensus 96 ~~~i~~~~v~~ll~~A~~l~i~~------l~~~c~~~L~~~l---------~~~n~~~i~~~A~~~~~-----~~L~~~~ 155 (256)
T 3hve_A 96 QIRLNEDTIQDVVQAADLLLLTD------LKTLCCEFLEGCI---------AAENCIGIRDFALHYCL-----HHVHYLA 155 (256)
T ss_dssp CCCCC-CCHHHHHHHHHHHTCHH------HHHHHHHHHHHTC---------CSSTTHHHHHHHHHTTC-----HHHHHHH
T ss_pred CCcccHhHHHHHHHHHHHHChHH------HHHHHHHHHHhhC---------CHhhHHHHHHHHHHcCc-----HHHHHHH
Confidence 99999999999999999999998 9999999999987 57799999999999983 6666666
Q ss_pred hhccccCCCCCCCCCCCCccccCCCCCCcccccchhhcccCChHHHHHHHHHHHhcCCCchhHHHHHHHHHHhhhccccc
Q 012743 185 CKENQFSGSGRAESGTDNAISDMVSHPKTIVDWWAEDLTVLRIDVFQRVLIAMMARGFKQYALGPVLMLYAQKSLRGLEV 264 (457)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ww~eDl~~L~~d~~~rvI~a~~~~~~~ee~v~~al~~yak~~l~~~~~ 264 (457)
..... .++...+-.++|..|+.+.+..+++.......+|+.|++++++|++++.+.+.
T Consensus 156 ~~~i~---------------------~~f~~v~~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~~~~R~- 213 (256)
T 3hve_A 156 TEYLE---------------------THFRDVSSTEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHDTEIRK- 213 (256)
T ss_dssp HHHHH---------------------HHHHHHTTCHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC--CCST-
T ss_pred HHHHH---------------------HHHHHHhCCcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcCHHHHH-
Confidence 54432 01122334689999999999999998887777899999999999998766432
Q ss_pred cCCCCCCCCccchHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhhccC-hHhHHHHHH
Q 012743 265 FGKGRKKIEPHQEHEKRVVLETIVSLLPRERNAMSVSFLSVLLRAAIYLETT-VACRLDLEK 325 (457)
Q Consensus 265 ~~~~~~~~~~~~~~~~r~LLE~Iv~lLp~e~~~vs~~fL~~lLr~a~~l~aS-~~Cr~~LE~ 325 (457)
.+...|++.|+ + +.+|+.||.+.++...+++.+ +.|+..|++
T Consensus 214 -------------~~~~~ll~~VR--f----~~l~~~~l~~~v~~~~l~~~~~~~c~~ll~~ 256 (256)
T 3hve_A 214 -------------VHMKDVMSALW--V----SGLDSSYLREQMLNEPLVREIVKECSNIPLS 256 (256)
T ss_dssp -------------TTHHHHHHHHH--H----HTTCC-CHHHHHHTSTTHHHHHCC-------
T ss_pred -------------HHHHHHHHhCC--C----CCCCHHHHHHHHhcChHHHhhHHHHHHHhhC
Confidence 56789999999 4 779999999999999999998 789999875
No 2
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=100.00 E-value=1.7e-34 Score=283.88 Aligned_cols=237 Identities=15% Similarity=0.177 Sum_probs=198.4
Q ss_pred HHhhHHHHhhcCCCeeEEEEEC---CEEEeeccccccccChHHHHhhcCC-CCCCCceEecC------CCCCCHHHHHHH
Q 012743 28 MKRTSEWIFSQEIPSDVTVHVG---GTSFSLHKFPLVSKCGYIRKLVSVS-SEADLSVIEIP------DVPGGAEAFELA 97 (457)
Q Consensus 28 ~~~~~~~~r~~~~~~DV~l~V~---~~~F~~HK~vLaa~S~yfr~mf~~~-~e~~~~~v~L~------~~pGg~~~felv 97 (457)
.-++.+.+|.+|.+|||+|.|| |+.|+|||.+|+++|+||++||+++ +|+.+.+|+|+ ++ ++++|+.+
T Consensus 19 ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v--~~~~f~~l 96 (279)
T 3i3n_A 19 LSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGP--EPDTVEAV 96 (279)
T ss_dssp HHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCS--CHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCC--CHHHHHHH
Confidence 4455778999999999999998 9999999999999999999999987 77888899998 66 59999999
Q ss_pred HHHHhCCccccCchhHhhHHHHHhhhccccccccchHHHHHHHHHHHHhhhchhhHHHHHhhhhchHHHHHHhchhhHHH
Q 012743 98 AKFCYGINFEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVALTSLTGAVTVLHKSQGLLPIAEKVKLVGQCI 177 (457)
Q Consensus 98 l~FcYt~~i~it~~NV~~L~~AA~~Lqm~e~~~~~NL~~~ce~FL~~~v~~sw~~~i~~l~~C~~l~~~Ae~~~iv~rCi 177 (457)
++|+|||++.++.+||..++.||++|||++ |++.|++||.+.+ ...||.+++.+|+.+++
T Consensus 97 l~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~------L~~~c~~~L~~~l---------~~~n~~~i~~~A~~~~~----- 156 (279)
T 3i3n_A 97 IEYMYTGRIRVSTGSVHEVLELADRFLLIR------LKEFCGEFLKKKL---------HLSNCVAIHSLAHMYTL----- 156 (279)
T ss_dssp HHHHHHSEEEEETTTHHHHHHHHHHTTCHH------HHHHHHHHHHHHC---------CTTTHHHHHHHHHHTTC-----
T ss_pred HHhhCcCCcccCHHHHHHHHHHHHHHCcHH------HHHHHHHHHHHcC---------CcchHHHHHHHHHHcCc-----
Confidence 999999999999999999999999999997 9999999999987 67899999999999983
Q ss_pred HHHHHHHhhccccCCCCCCCCCCCCccccCCCCCCcccccchhhcccCChHHHHHHHHHHHhcCCCchhHHHHHHHHHHh
Q 012743 178 DAIAYIACKENQFSGSGRAESGTDNAISDMVSHPKTIVDWWAEDLTVLRIDVFQRVLIAMMARGFKQYALGPVLMLYAQK 257 (457)
Q Consensus 178 dsLa~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ww~eDl~~L~~d~~~rvI~a~~~~~~~ee~v~~al~~yak~ 257 (457)
+.|..++...+. .++...+..++|..|+.+.+..+++.......+|+.|++++++|+++
T Consensus 157 ~~L~~~~~~~i~---------------------~~f~~v~~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~ 215 (279)
T 3i3n_A 157 SQLALKAADMIR---------------------RNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQR 215 (279)
T ss_dssp HHHHHHHHHHHH---------------------HTHHHHTTSSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH---------------------HHHHHHhcCcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHc
Confidence 666666655442 01123344689999999999999888777777899999999999998
Q ss_pred hhccccccCCCCCCCCccchHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhhccChHhHHHHHHHH
Q 012743 258 SLRGLEVFGKGRKKIEPHQEHEKRVVLETIVSLLPRERNAMSVSFLSVLLRAAIYLETTVACRLDLEKRM 327 (457)
Q Consensus 258 ~l~~~~~~~~~~~~~~~~~~~~~r~LLE~Iv~lLp~e~~~vs~~fL~~lLr~a~~l~aS~~Cr~~LE~ri 327 (457)
..+.+. .+...|++.|+ + +.+|+.+|...++...++..++.|+..|.+-.
T Consensus 216 ~~~~r~--------------~~~~~ll~~VR--f----~l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~ 265 (279)
T 3i3n_A 216 NAEERE--------------RYFEELFKLLR--L----SQMKPTYLTRHVKPERLVANNEVCVKLVADAV 265 (279)
T ss_dssp THHHHT--------------TTHHHHHTTSC--G----GGSCHHHHHHTTTTSHHHHTCHHHHHHHHHHH
T ss_pred CHHHHH--------------HHHHHHHHhcC--C----CCCCHHHHHHHhhccchhcCCHHHHHHHHHHH
Confidence 866432 56788999999 5 77999999999999999999999999887644
No 3
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.90 E-value=3.6e-24 Score=194.47 Aligned_cols=144 Identities=17% Similarity=0.159 Sum_probs=127.9
Q ss_pred CchHHHHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCC-CCCCCceEecCCCCCCHHHHHHHHHHH
Q 012743 23 LLSTAMKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVS-SEADLSVIEIPDVPGGAEAFELAAKFC 101 (457)
Q Consensus 23 ~~~~~~~~~~~~~r~~~~~~DV~l~V~~~~F~~HK~vLaa~S~yfr~mf~~~-~e~~~~~v~L~~~pGg~~~felvl~Fc 101 (457)
.|.+-..+...+++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. +++....|.|++++ +++|+.+++|+
T Consensus 16 ~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~l~~~ 93 (172)
T 3htm_A 16 VPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFI 93 (172)
T ss_dssp CCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSC--HHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCC--HHHHHHHHHHH
Confidence 3444445667788899999999999999999999999999999999999987 67777899999995 99999999999
Q ss_pred hCCccccCchhHhhHHHHHhhhccccccccchHHHHHHHHHHHHhhhchhhHHHHHhhhhchHHHHHHhchhhHHHHHHH
Q 012743 102 YGINFEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVALTSLTGAVTVLHKSQGLLPIAEKVKLVGQCIDAIA 181 (457)
Q Consensus 102 Yt~~i~it~~NV~~L~~AA~~Lqm~e~~~~~NL~~~ce~FL~~~v~~sw~~~i~~l~~C~~l~~~Ae~~~iv~rCidsLa 181 (457)
||+++.++.+|+..|+.+|++++|++ |++.|++||.+.+ ...||..++.+|+.|++ +.|.
T Consensus 94 Yt~~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~l---------~~~n~~~~~~~A~~~~~-----~~L~ 153 (172)
T 3htm_A 94 YTGKAPNLDKMADDLLAAADKYALER------LKVMCEDALCSNL---------SVENAAEILILADLHSA-----DQLK 153 (172)
T ss_dssp HHSCCTTGGGTHHHHHHHHHHTTCHH------HHHHHHHHHHHTC---------CTTTHHHHHHHHHHTTC-----HHHH
T ss_pred hCCCCCCcHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHhC---------CHHHHHHHHHHHHHhCc-----HHHH
Confidence 99999999999999999999999997 9999999999986 67899999999999983 6666
Q ss_pred HHHhhcc
Q 012743 182 YIACKEN 188 (457)
Q Consensus 182 ~ka~~~~ 188 (457)
..+...+
T Consensus 154 ~~~~~~i 160 (172)
T 3htm_A 154 TQAVDFI 160 (172)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665443
No 4
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.90 E-value=8.3e-25 Score=193.35 Aligned_cols=133 Identities=17% Similarity=0.174 Sum_probs=101.0
Q ss_pred CchHHHHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCC-CCCCCceEecCCCCCCHHHHHHHHHHH
Q 012743 23 LLSTAMKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVS-SEADLSVIEIPDVPGGAEAFELAAKFC 101 (457)
Q Consensus 23 ~~~~~~~~~~~~~r~~~~~~DV~l~V~~~~F~~HK~vLaa~S~yfr~mf~~~-~e~~~~~v~L~~~pGg~~~felvl~Fc 101 (457)
.|.+-..+....++.++.+|||+|.|+|+.|++||.+|+++|+||++||++. +++....|.|++++ +++|+.+++|+
T Consensus 7 ~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~~~~~l~~~ 84 (145)
T 4eoz_A 7 VPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFI 84 (145)
T ss_dssp CCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSC--HHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCC--HHHHHHHHHhh
Confidence 3444445667788899999999999999999999999999999999999986 56666789999994 99999999999
Q ss_pred hCCccccCchhHhhHHHHHhhhccccccccchHHHHHHHHHHHHhhhchhhHHHHHhhhhchHHHHHHhch
Q 012743 102 YGINFEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVALTSLTGAVTVLHKSQGLLPIAEKVKL 172 (457)
Q Consensus 102 Yt~~i~it~~NV~~L~~AA~~Lqm~e~~~~~NL~~~ce~FL~~~v~~sw~~~i~~l~~C~~l~~~Ae~~~i 172 (457)
|||++.++.+|+..++.+|++++|++ |++.|++||.+.+ ...||..++.+|+.|++
T Consensus 85 Y~~~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~l---------~~~n~~~~l~~A~~~~~ 140 (145)
T 4eoz_A 85 YTGKAPNLDKMADDLLAAADKYALER------LKVMCEDALCSNL---------SVENAAEILILADLHSA 140 (145)
T ss_dssp HHSCCTTGGGTHHHHHHHHHHTTCHH------HHHHHHCC-------------------------------
T ss_pred ccCccCCcHHHHHHHHHHHHHhCHHH------HHHHHHHHHHHhC---------CHHHHHHHHHHHHHhCH
Confidence 99999999999999999999999998 9999999999986 78899999999999983
No 5
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.89 E-value=3.4e-23 Score=178.40 Aligned_cols=107 Identities=25% Similarity=0.317 Sum_probs=97.1
Q ss_pred HhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCC-CCCCCceEecCCCCCCHHHHHHHHHHHhCCccc
Q 012743 29 KRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVS-SEADLSVIEIPDVPGGAEAFELAAKFCYGINFE 107 (457)
Q Consensus 29 ~~~~~~~r~~~~~~DV~l~V~~~~F~~HK~vLaa~S~yfr~mf~~~-~e~~~~~v~L~~~pGg~~~felvl~FcYt~~i~ 107 (457)
.+..+.++.++.+|||+|.|+|++|++||.+|+++|+||++||++. +|+....|.|++++ +++|+.+++|+|||++.
T Consensus 13 ~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~ll~~~Yt~~~~ 90 (120)
T 2if5_A 13 LSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVS--AEALTALMDFAYTATLT 90 (120)
T ss_dssp HHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSC--HHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCC--HHHHHHHHHHHcCCCCc
Confidence 3456778999999999999999999999999999999999999987 67777899999995 99999999999999999
Q ss_pred cCchhHhhHHHHHhhhccccccccchHHHHHHHHHH
Q 012743 108 INTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLN 143 (457)
Q Consensus 108 it~~NV~~L~~AA~~Lqm~e~~~~~NL~~~ce~FL~ 143 (457)
++.+|+..++.||+++||++ |++.|++||+
T Consensus 91 ~~~~~~~~ll~~A~~~~i~~------L~~~C~~~L~ 120 (120)
T 2if5_A 91 VSTANVGDILSAARLLEIPA------VSHVCADLLD 120 (120)
T ss_dssp CCGGGHHHHHHHHHHTTCHH------HHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHhCCHH------HHHHHHHHhC
Confidence 99999999999999999998 9999999984
No 6
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.88 E-value=1.8e-23 Score=180.66 Aligned_cols=106 Identities=21% Similarity=0.211 Sum_probs=96.4
Q ss_pred HhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCCCCCCCceEecCCCCCCHHHHHHHHHHHhCCcccc
Q 012743 29 KRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIPDVPGGAEAFELAAKFCYGINFEI 108 (457)
Q Consensus 29 ~~~~~~~r~~~~~~DV~l~V~~~~F~~HK~vLaa~S~yfr~mf~~~~e~~~~~v~L~~~pGg~~~felvl~FcYt~~i~i 108 (457)
-++.+.++.+|.+|||+|.|||++|++||.+|+++|+||++||.++. +..|.|++++ +++|+.+++|+|||++.+
T Consensus 12 ~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~---~~~i~l~~~~--~~~f~~ll~~iYtg~~~~ 86 (119)
T 3b84_A 12 LQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS---GGSVVLPAGF--AEIFGLLLDFFYTGHLAL 86 (119)
T ss_dssp HHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT---CCCEEECGGG--HHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC---CCeEEeCCCC--HHHHHHHHHHHcCCCCcc
Confidence 35567899999999999999999999999999999999999998753 4679999995 999999999999999999
Q ss_pred CchhHhhHHHHHhhhccccccccchHHHHHHHHHHHH
Q 012743 109 NTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEV 145 (457)
Q Consensus 109 t~~NV~~L~~AA~~Lqm~e~~~~~NL~~~ce~FL~~~ 145 (457)
+.+|+..|+.||++|||++ |++.|++||.+.
T Consensus 87 ~~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~~ 117 (119)
T 3b84_A 87 TSGNRDQVLLAARELRVPE------AVELCQSFKPKT 117 (119)
T ss_dssp CTTTHHHHHHHHHHTTCHH------HHHHHHHCC---
T ss_pred CHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHc
Confidence 9999999999999999998 999999999874
No 7
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.88 E-value=6.2e-23 Score=175.97 Aligned_cols=105 Identities=19% Similarity=0.291 Sum_probs=95.8
Q ss_pred HhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCCCCCCCceEecC--CCCCCHHHHHHHHHHHhCCcc
Q 012743 29 KRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIP--DVPGGAEAFELAAKFCYGINF 106 (457)
Q Consensus 29 ~~~~~~~r~~~~~~DV~l~V~~~~F~~HK~vLaa~S~yfr~mf~~~~e~~~~~v~L~--~~pGg~~~felvl~FcYt~~i 106 (457)
.++.+.++.+|.+|||+|.|+|+.|++||.+|+++|+||++||.+. .+..|.|+ +++ +++|+.+++|+|||++
T Consensus 10 ~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~---~~~~i~l~~~~~~--~~~f~~ll~~~Yt~~~ 84 (116)
T 2vpk_A 10 LERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST---SENNVFLDQSQVK--ADGFQKLLEFIYTGTL 84 (116)
T ss_dssp HHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC---CCSCEECCTTTCC--HHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC---CCCeEEeecCCCC--HHHHHHHHHHHcCCCc
Confidence 4556789999999999999999999999999999999999999886 24567777 884 9999999999999999
Q ss_pred ccCchhHhhHHHHHhhhccccccccchHHHHHHHHHHH
Q 012743 107 EINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNE 144 (457)
Q Consensus 107 ~it~~NV~~L~~AA~~Lqm~e~~~~~NL~~~ce~FL~~ 144 (457)
.++.+|+..++.||++|||++ |++.|++||.+
T Consensus 85 ~~~~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~ 116 (116)
T 2vpk_A 85 NLDSWNVKEIHQAADYLKVEE------VVTKCKIKMED 116 (116)
T ss_dssp CCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHC-
T ss_pred ccCHHHHHHHHHHHHHhCCHH------HHHHHHHHHhC
Confidence 999999999999999999997 99999999863
No 8
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.88 E-value=4.2e-23 Score=174.54 Aligned_cols=102 Identities=24% Similarity=0.365 Sum_probs=92.7
Q ss_pred HhhcCCCeeEEEEECC----EEEeeccccccccChHHHHhhcCC-CCCCCceEecCCCCCCHHHHHHHHHHHhCCccccC
Q 012743 35 IFSQEIPSDVTVHVGG----TSFSLHKFPLVSKCGYIRKLVSVS-SEADLSVIEIPDVPGGAEAFELAAKFCYGINFEIN 109 (457)
Q Consensus 35 ~r~~~~~~DV~l~V~~----~~F~~HK~vLaa~S~yfr~mf~~~-~e~~~~~v~L~~~pGg~~~felvl~FcYt~~i~it 109 (457)
++.++.+|||+|.|+| +.|++||.+|+++|+||++||++. +|+. ..|.|++++ +++|+.+++|+||+++.++
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~--~~~f~~~l~~iYt~~~~~~ 78 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVE--PAAFLILLKYMYSDEIDLE 78 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSC--HHHHHHHHHHHHHCCCCCC
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCC--HHHHHHHHHHHcCCCccCC
Confidence 5788999999999998 999999999999999999999987 5666 889999994 9999999999999999999
Q ss_pred chhHhhHHHHHhhhccccccccchHHHHHHHHHHHH
Q 012743 110 TENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEV 145 (457)
Q Consensus 110 ~~NV~~L~~AA~~Lqm~e~~~~~NL~~~ce~FL~~~ 145 (457)
.+|+..++.+|++++|++ |++.|++||.+.
T Consensus 79 ~~~~~~ll~~A~~~~~~~------L~~~c~~~l~~~ 108 (109)
T 2vkp_A 79 ADTVLATLYAAKKYIVPA------LAKACVNFLETS 108 (109)
T ss_dssp TTTHHHHHHHHHHTTCHH------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHH------HHHHHHHHHHhh
Confidence 999999999999999998 999999999875
No 9
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.88 E-value=8.6e-23 Score=177.79 Aligned_cols=108 Identities=23% Similarity=0.436 Sum_probs=100.3
Q ss_pred HHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCC-CCCCCceEec-CCCCCCHHHHHHHHHHHhCCc
Q 012743 28 MKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVS-SEADLSVIEI-PDVPGGAEAFELAAKFCYGIN 105 (457)
Q Consensus 28 ~~~~~~~~r~~~~~~DV~l~V~~~~F~~HK~vLaa~S~yfr~mf~~~-~e~~~~~v~L-~~~pGg~~~felvl~FcYt~~ 105 (457)
..+..+.++.++.+|||+|.|+|++|++||.+|+++|+||++||.+. .| ....|.| ++++ +++|+.+++|+|||+
T Consensus 16 l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~--~~~f~~ll~~~Ytg~ 92 (127)
T 1r29_A 16 VLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEIN--PEGFNILLDFMYTSR 92 (127)
T ss_dssp HHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSC--HHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCC--HHHHHHHHHHHcCCC
Confidence 34556788999999999999999999999999999999999999987 55 6788999 8994 999999999999999
Q ss_pred cccCchhHhhHHHHHhhhccccccccchHHHHHHHHHHH
Q 012743 106 FEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNE 144 (457)
Q Consensus 106 i~it~~NV~~L~~AA~~Lqm~e~~~~~NL~~~ce~FL~~ 144 (457)
+.++.+|+..|+.||++|||++ |++.|++||.+
T Consensus 93 ~~~~~~~~~~ll~~A~~~~i~~------L~~~c~~~l~~ 125 (127)
T 1r29_A 93 LNLREGNIMAVMATAMYLQMEH------VVDTCRKFIKA 125 (127)
T ss_dssp CCCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHT
T ss_pred cCcCHHHHHHHHHHHHHhCCHH------HHHHHHHHHHh
Confidence 9999999999999999999998 99999999975
No 10
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.88 E-value=1.1e-22 Score=176.06 Aligned_cols=106 Identities=16% Similarity=0.221 Sum_probs=98.2
Q ss_pred HHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCCCCCCCceEecCCCCCCHHHHHHHHHHHhCCccc
Q 012743 28 MKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIPDVPGGAEAFELAAKFCYGINFE 107 (457)
Q Consensus 28 ~~~~~~~~r~~~~~~DV~l~V~~~~F~~HK~vLaa~S~yfr~mf~~~~e~~~~~v~L~~~pGg~~~felvl~FcYt~~i~ 107 (457)
..+..+.++.++.+|||+|.|+|++|++||.+|+++|+||++||++. ..+|.|++++ +++|+.+++|+|||++.
T Consensus 15 l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~----~~~i~l~~~~--~~~f~~ll~~~Ytg~~~ 88 (121)
T 1buo_A 15 LLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN----SQHYTLDFLS--PKTFQQILEYAYTATLQ 88 (121)
T ss_dssp HHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSC--HHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC----CcEEEeCCCC--HHHHHHHHHhhcCCCcC
Confidence 34556788999999999999999999999999999999999999864 4579999995 99999999999999999
Q ss_pred cCchhHhhHHHHHhhhccccccccchHHHHHHHHHHHH
Q 012743 108 INTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEV 145 (457)
Q Consensus 108 it~~NV~~L~~AA~~Lqm~e~~~~~NL~~~ce~FL~~~ 145 (457)
++.+|+..++.||++|||++ |++.|++||.+.
T Consensus 89 ~~~~~~~~ll~~A~~~~i~~------L~~~c~~~l~~~ 120 (121)
T 1buo_A 89 AKAEDLDDLLYAAEILEIEY------LEEQCLKMLETI 120 (121)
T ss_dssp CCGGGHHHHHHHHHHHTCHH------HHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCHH------HHHHHHHHHHHh
Confidence 99999999999999999997 999999999875
No 11
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.87 E-value=8.1e-23 Score=180.96 Aligned_cols=115 Identities=21% Similarity=0.306 Sum_probs=102.5
Q ss_pred hHHHHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCCCCCCCceEecC-CCCCCHHHHHHHHHHHhC
Q 012743 25 STAMKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIP-DVPGGAEAFELAAKFCYG 103 (457)
Q Consensus 25 ~~~~~~~~~~~r~~~~~~DV~l~V~~~~F~~HK~vLaa~S~yfr~mf~~~~e~~~~~v~L~-~~pGg~~~felvl~FcYt 103 (457)
.....+..+.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+... +...|.|+ ++ .+++|+.+++|+||
T Consensus 20 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~-e~~~i~l~~~v--~~~~~~~lL~~~Yt 96 (138)
T 2z8h_A 20 STNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTD-AELTVTLPEEV--TVKGFEPLIQFAYT 96 (138)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCC-TTEEEECCTTS--CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCC-CCceEEeCCCC--CHHHHHHHHHHhcC
Confidence 3445566788999999999999999999999999999999999999998622 13578884 88 49999999999999
Q ss_pred CccccCchhHhhHHHHHhhhccccccccchHHHHHHHHHHHHhhh
Q 012743 104 INFEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVALT 148 (457)
Q Consensus 104 ~~i~it~~NV~~L~~AA~~Lqm~e~~~~~NL~~~ce~FL~~~v~~ 148 (457)
|++.++.+||..|+.||++|||++ |++.|++||.+.+..
T Consensus 97 g~~~i~~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~~l~~ 135 (138)
T 2z8h_A 97 AKLILSKDNVDEVCRCVEFLSVHN------IEESCFQFLKFKFLD 135 (138)
T ss_dssp SCCCCCTTTHHHHHHHHHHHTCGG------GHHHHHHHTTCCCSC
T ss_pred CCcccCHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHhccc
Confidence 999999999999999999999998 999999999987644
No 12
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.87 E-value=3.8e-23 Score=182.73 Aligned_cols=108 Identities=19% Similarity=0.223 Sum_probs=95.6
Q ss_pred HHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCCCCCCCceEecCCCCCCHHHHHHHHHHHhCCccc
Q 012743 28 MKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIPDVPGGAEAFELAAKFCYGINFE 107 (457)
Q Consensus 28 ~~~~~~~~r~~~~~~DV~l~V~~~~F~~HK~vLaa~S~yfr~mf~~~~e~~~~~v~L~~~pGg~~~felvl~FcYt~~i~ 107 (457)
..+..+.+|.++.+|||+|.|+|+.|++||.+|+++|+||++||.+.. ...|.|++++ +++|+.+++|+|||++.
T Consensus 12 l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~---~~~i~l~~~~--~~~f~~lL~fiYtg~~~ 86 (135)
T 2yy9_A 12 VLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT---GGSVVLPAGF--AEIFGLLLDFFYTGHLA 86 (135)
T ss_dssp HHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC-------CCEEECGGG--HHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC---CCeEEeCCCC--HHHHHHHHHHHhCCCCC
Confidence 345677899999999999999999999999999999999999998753 4579999995 99999999999999999
Q ss_pred cCchhHhhHHHHHhhhccccccccchHHHHHHHHHHHHh
Q 012743 108 INTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVA 146 (457)
Q Consensus 108 it~~NV~~L~~AA~~Lqm~e~~~~~NL~~~ce~FL~~~v 146 (457)
++.+||..|+.||++|||++ |++.|++||.+.+
T Consensus 87 i~~~~v~~ll~~A~~l~i~~------L~~~C~~~l~~~l 119 (135)
T 2yy9_A 87 LTSGNRDQVLLAAKELRVPE------AVELCQSFQPQTS 119 (135)
T ss_dssp CCTTTHHHHHHHHHHTTCHH------HHHHHHHCCC---
T ss_pred CCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHhc
Confidence 99999999999999999997 9999999998875
No 13
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.87 E-value=8.6e-23 Score=182.66 Aligned_cols=108 Identities=15% Similarity=0.238 Sum_probs=95.4
Q ss_pred HHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCC-C--CCCCceEecCCCCCCHHHHHHHHHHHhCC
Q 012743 28 MKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVS-S--EADLSVIEIPDVPGGAEAFELAAKFCYGI 104 (457)
Q Consensus 28 ~~~~~~~~r~~~~~~DV~l~V~~~~F~~HK~vLaa~S~yfr~mf~~~-~--e~~~~~v~L~~~pGg~~~felvl~FcYt~ 104 (457)
..++.+.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. + ++....|.|++++ +++|+.+++|+|||
T Consensus 34 l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~--~~~f~~lL~fiYtg 111 (144)
T 2ppi_A 34 LLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSG 111 (144)
T ss_dssp HHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSC--HHHHHHHHHHHTTS
T ss_pred HHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCC--HHHHHHHHHHHhCC
Confidence 34556788999999999999999999999999999999999999875 3 3567789999995 99999999999999
Q ss_pred ccccCchhHhhHHHHHhhhccccccccchHHHHHHHHHH
Q 012743 105 NFEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLN 143 (457)
Q Consensus 105 ~i~it~~NV~~L~~AA~~Lqm~e~~~~~NL~~~ce~FL~ 143 (457)
++.++.+|+..|+.||++|||++ |++.|++||.
T Consensus 112 ~~~i~~~~v~~ll~~A~~l~i~~------L~~~C~~~L~ 144 (144)
T 2ppi_A 112 QIRLNEDTIQDVVQAADLLLLTD------LKTLCCEFLE 144 (144)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHH------HHHHHHTTC-
T ss_pred CCCCCHHHHHHHHHHHHHhCcHH------HHHHHHHHhC
Confidence 99999999999999999999998 9999999974
No 14
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.87 E-value=9.6e-23 Score=176.08 Aligned_cols=103 Identities=21% Similarity=0.296 Sum_probs=94.8
Q ss_pred HhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCCCCCCCceEecCCCCCCHHHHHHHHHHHhCCcccc
Q 012743 29 KRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIPDVPGGAEAFELAAKFCYGINFEI 108 (457)
Q Consensus 29 ~~~~~~~r~~~~~~DV~l~V~~~~F~~HK~vLaa~S~yfr~mf~~~~e~~~~~v~L~~~pGg~~~felvl~FcYt~~i~i 108 (457)
-+..+.+|.++.+|||+|.|+|+.|++||.+|+++|+||++||++. ...|.|+++ ++++|+.+++|+|||++.+
T Consensus 15 ~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~i~l~~~--~~~~f~~ll~~~Ytg~~~i 88 (119)
T 2q81_A 15 LEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ----KDVVHLDIS--NAAGLGQVLEFMYTAKLSL 88 (119)
T ss_dssp HHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC----CSGGGGGGC--CHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCC--CHHHHHHHHHHHcCCCCcc
Confidence 3456788999999999999999999999999999999999999863 346788888 4999999999999999999
Q ss_pred CchhHhhHHHHHhhhccccccccchHHHHHHHHHH
Q 012743 109 NTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLN 143 (457)
Q Consensus 109 t~~NV~~L~~AA~~Lqm~e~~~~~NL~~~ce~FL~ 143 (457)
+.+|+..|+.||++|||++ |++.|++||.
T Consensus 89 ~~~~~~~ll~~A~~l~i~~------L~~~C~~~l~ 117 (119)
T 2q81_A 89 SPENVDDVLAVATFLQMQD------IITACHALKS 117 (119)
T ss_dssp CTTTHHHHHHHHHHTTCHH------HHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhCCHH------HHHHHHHHHh
Confidence 9999999999999999998 9999999985
No 15
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.86 E-value=6.8e-23 Score=179.28 Aligned_cols=107 Identities=25% Similarity=0.425 Sum_probs=91.7
Q ss_pred HHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCCCCCCCceEecC-CCCCCHHHHHHHHHHHhCCcc
Q 012743 28 MKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIP-DVPGGAEAFELAAKFCYGINF 106 (457)
Q Consensus 28 ~~~~~~~~r~~~~~~DV~l~V~~~~F~~HK~vLaa~S~yfr~mf~~~~e~~~~~v~L~-~~pGg~~~felvl~FcYt~~i 106 (457)
..+..+.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. ....|.|+ +++ +++|+.+++|+|||++
T Consensus 20 l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~---~~~~i~l~~~~~--~~~f~~ll~~iYtg~~ 94 (129)
T 3ga1_A 20 ILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS---RSAVVELPAAVQ--PQSFQQILSFCYTGRL 94 (129)
T ss_dssp HHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC---CCSEEECCTTCC--HHHHHHHHHHHHHSEE
T ss_pred HHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC---CCCEEEECCCCC--HHHHHHHHHHHhCCcc
Confidence 34556788899999999999999999999999999999999999875 45689996 895 9999999999999999
Q ss_pred ccCchhHhhHHHHHhhhccccccccchHHHHHHHHHHHH
Q 012743 107 EINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEV 145 (457)
Q Consensus 107 ~it~~NV~~L~~AA~~Lqm~e~~~~~NL~~~ce~FL~~~ 145 (457)
.++.+|+..|+.||++|||++ |++.|++||.+.
T Consensus 95 ~i~~~~~~~ll~~A~~~~i~~------l~~~C~~~L~~~ 127 (129)
T 3ga1_A 95 SMNVGDQDLLMYTAGFLQIQE------IMEKGTEFFLKV 127 (129)
T ss_dssp ECCTTTHHHHHHHHHHTTBTT------SSCC--------
T ss_pred ccCHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHh
Confidence 999999999999999999998 999999999875
No 16
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.86 E-value=6.3e-23 Score=178.14 Aligned_cols=106 Identities=23% Similarity=0.310 Sum_probs=96.1
Q ss_pred HHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCCCCCCCceEecCC-CCCCHHHHHHHHHHHhCCcc
Q 012743 28 MKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIPD-VPGGAEAFELAAKFCYGINF 106 (457)
Q Consensus 28 ~~~~~~~~r~~~~~~DV~l~V~~~~F~~HK~vLaa~S~yfr~mf~~~~e~~~~~v~L~~-~pGg~~~felvl~FcYt~~i 106 (457)
..++.+.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+.... ...|.+++ + .+++|+.+++|+|||++
T Consensus 19 l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~e-~~~i~l~~~~--~~~~f~~~l~~iYtg~~ 95 (125)
T 3ohu_A 19 ILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTKN-DLVVSLPEEV--TARGFGPLLQFAYTAKL 95 (125)
T ss_dssp HHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCCS-SCEEECCTTC--CHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCCC-CcEEEeCCCC--CHHHHHHHHHhHcCCce
Confidence 45567788999999999999999999999999999999999999986322 56899987 8 49999999999999999
Q ss_pred ccCchhHhhHHHHHhhhccccccccchHHHHHHHHH
Q 012743 107 EINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYL 142 (457)
Q Consensus 107 ~it~~NV~~L~~AA~~Lqm~e~~~~~NL~~~ce~FL 142 (457)
.++.+||..|+.||++|||++ |++.|++||
T Consensus 96 ~~~~~~v~~ll~~A~~l~i~~------L~~~C~~~L 125 (125)
T 3ohu_A 96 LLSRENIREVIRCAEFLRMHN------LEDSCFSFL 125 (125)
T ss_dssp EECTTTHHHHHHHHHHHTBSS------CTTSSCCCC
T ss_pred EECHHHHHHHHHHHHHhCCHH------HHHHHHHhC
Confidence 999999999999999999998 888888775
No 17
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.86 E-value=1.1e-22 Score=176.94 Aligned_cols=110 Identities=21% Similarity=0.290 Sum_probs=97.5
Q ss_pred chHHHHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCC-CCCCCceEec-CCCCCCHHHHHHHHHHH
Q 012743 24 LSTAMKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVS-SEADLSVIEI-PDVPGGAEAFELAAKFC 101 (457)
Q Consensus 24 ~~~~~~~~~~~~r~~~~~~DV~l~V~~~~F~~HK~vLaa~S~yfr~mf~~~-~e~~~~~v~L-~~~pGg~~~felvl~Fc 101 (457)
+.....+..+.++.+|.+|||+|.|+|+.|++||.+|+++|+||++||++. ++ ...|.+ .++ .+++|+.+++|+
T Consensus 12 ~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~~e--~~~i~l~~~v--~~~~f~~lL~~i 87 (124)
T 2ihc_A 12 HSTNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQADG--ELNITLPEEV--TVKGFEPLIQFA 87 (124)
T ss_dssp HHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC-----CEEEECCTTS--CHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCCCC--CceEeecCCc--CHHHHHHHHHHh
Confidence 344455677889999999999999999999999999999999999999986 33 357888 488 499999999999
Q ss_pred hCCccccCchhHhhHHHHHhhhccccccccchHHHHHHHHHH
Q 012743 102 YGINFEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLN 143 (457)
Q Consensus 102 Yt~~i~it~~NV~~L~~AA~~Lqm~e~~~~~NL~~~ce~FL~ 143 (457)
|||++.++.+||..|+.||++|||++ |++.|++||.
T Consensus 88 Ytg~~~i~~~~v~~ll~~A~~~~~~~------L~~~C~~~l~ 123 (124)
T 2ihc_A 88 YTAKLILSKENVDEVCKCVEFLSVHN------IEESCFQFLK 123 (124)
T ss_dssp HHSEEEEETTTHHHHHHHHHHHTBSS------CCGGGGGTC-
T ss_pred cCCCcccCHHHHHHHHHHHHHHCCHH------HHHHHHHHHh
Confidence 99999999999999999999999998 9999999875
No 18
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.85 E-value=8.9e-22 Score=170.96 Aligned_cols=95 Identities=16% Similarity=0.165 Sum_probs=86.2
Q ss_pred HhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCCCCCCCceEecCCCCCCHHHHHHHHHHHhCCccccCchhHh
Q 012743 35 IFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIPDVPGGAEAFELAAKFCYGINFEINTENVA 114 (457)
Q Consensus 35 ~r~~~~~~DV~l~V~~~~F~~HK~vLaa~S~yfr~mf~~~~e~~~~~v~L~~~pGg~~~felvl~FcYt~~i~it~~NV~ 114 (457)
.|.+|.+|||+|.|+|+.|++||.+||++|+||++ ....|+|++++ +++|+.+++|+|||++.|+.+||.
T Consensus 24 ~r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~--------~~~~i~l~~v~--~~~f~~ll~fiYtg~~~i~~~~v~ 93 (119)
T 3m5b_A 24 ARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR--------RGQWALGEGIS--PSTFAQLLNFVYGESVELQPGELR 93 (119)
T ss_dssp HHHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC--------CEEEECCSSCC--HHHHHHHHHHHTTCCEEECGGGHH
T ss_pred HHhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc--------CCCEEEeCCCC--HHHHHHHHHHHcCCCcCcCHHHHH
Confidence 36789999999999999999999999999999985 23578999994 999999999999999999999999
Q ss_pred hHHHHHhhhccccccccchHHHHHHHHHHHH
Q 012743 115 GLRCVAEYLEMTEDYAVGNLVGRAEAYLNEV 145 (457)
Q Consensus 115 ~L~~AA~~Lqm~e~~~~~NL~~~ce~FL~~~ 145 (457)
.|+.||++|||+. |++.|++++.+.
T Consensus 94 ~ll~aA~~l~i~~------l~~~C~~~~~~~ 118 (119)
T 3m5b_A 94 PLQEAARALGVQS------LEEACWRARGDR 118 (119)
T ss_dssp HHHHHHHHTTCHH------HHHHHHHHC---
T ss_pred HHHHHHHHhCCHH------HHHHHHHHHhhc
Confidence 9999999999997 999999998763
No 19
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.85 E-value=1.9e-21 Score=193.37 Aligned_cols=127 Identities=18% Similarity=0.189 Sum_probs=114.9
Q ss_pred HHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCC-CCCCCceEecCCCCCCHHHHHHHHHHHhCCcc
Q 012743 28 MKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVS-SEADLSVIEIPDVPGGAEAFELAAKFCYGINF 106 (457)
Q Consensus 28 ~~~~~~~~r~~~~~~DV~l~V~~~~F~~HK~vLaa~S~yfr~mf~~~-~e~~~~~v~L~~~pGg~~~felvl~FcYt~~i 106 (457)
..+....++.++.+|||+|.|+|++|++||.+||++|+||++||.+. +|+...+|.|++++ +++|+.+++|+||+++
T Consensus 161 l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~L~~iYt~~~ 238 (312)
T 3hqi_A 161 LADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKA 238 (312)
T ss_dssp HHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSC--HHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCC--HHHHHHHHHhhcCCCC
Confidence 44556678889999999999999999999999999999999999986 67778899999994 9999999999999999
Q ss_pred ccCchhHhhHHHHHhhhccccccccchHHHHHHHHHHHHhhhchhhHHHHHhhhhchHHHHHHhc
Q 012743 107 EINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVALTSLTGAVTVLHKSQGLLPIAEKVK 171 (457)
Q Consensus 107 ~it~~NV~~L~~AA~~Lqm~e~~~~~NL~~~ce~FL~~~v~~sw~~~i~~l~~C~~l~~~Ae~~~ 171 (457)
.++.+|+..|+.||++++|+. |+..|++||.+.+ ...||..++.+|+.|+
T Consensus 239 ~~~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~~---------~~~n~~~~l~~A~~~~ 288 (312)
T 3hqi_A 239 PNLDKMADDLLAAADKYALER------LKVMCEDALCSNL---------SVENAAEILILADLHS 288 (312)
T ss_dssp TTHHHHHHHHHHHHHHTTCHH------HHHHHHHHHHTTC---------CTTTHHHHHHHHHHTT
T ss_pred CChHHHHHHHHHHHHHhCHHH------HHHHHHHHHHccC---------CHHHHHHHHHHHHHhC
Confidence 999999999999999999997 9999999999886 5789999999999997
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.81 E-value=2.8e-20 Score=160.31 Aligned_cols=94 Identities=22% Similarity=0.264 Sum_probs=86.9
Q ss_pred HHhhHHHHhhcCCCeeEEEEECCEEEeeccccccccChHHHHhhcCCCCCCCceEecCCCCCCHHHHHHHHHHHhCCcc-
Q 012743 28 MKRTSEWIFSQEIPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIPDVPGGAEAFELAAKFCYGINF- 106 (457)
Q Consensus 28 ~~~~~~~~r~~~~~~DV~l~V~~~~F~~HK~vLaa~S~yfr~mf~~~~e~~~~~v~L~~~pGg~~~felvl~FcYt~~i- 106 (457)
..+..+.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. ...|.|++++ +++|+.+++|+|||++
T Consensus 18 l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~----~~~i~l~~~~--~~~f~~~l~~~Ytg~~~ 91 (116)
T 3fkc_A 18 LLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA----GQVVELSFIR--AEIFAEILNYIYSSKIV 91 (116)
T ss_dssp HHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSC--HHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCCC--HHHHHHHHHhhcCCCcC
Confidence 44556788999999999999999999999999999999999999875 4589999995 9999999999999999
Q ss_pred ccCchhHhhHHHHHhhhcccc
Q 012743 107 EINTENVAGLRCVAEYLEMTE 127 (457)
Q Consensus 107 ~it~~NV~~L~~AA~~Lqm~e 127 (457)
.++.+|+..++.||++|||+.
T Consensus 92 ~~~~~~~~~ll~~A~~l~i~~ 112 (116)
T 3fkc_A 92 RVRSDLLDELIKSGQLLGVKF 112 (116)
T ss_dssp SCCHHHHHHHHHHHHHHTCHH
T ss_pred CCCHHHHHHHHHHHHHhCccc
Confidence 799999999999999999986
No 21
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.51 E-value=1.7e-14 Score=131.28 Aligned_cols=94 Identities=15% Similarity=0.291 Sum_probs=82.4
Q ss_pred EEEEE-CCEEEeeccccccccChHHHHhhcC-C-C-CCCCceEecCCCCCCHHHHHHHHHHHhCCc--------------
Q 012743 44 VTVHV-GGTSFSLHKFPLVSKCGYIRKLVSV-S-S-EADLSVIEIPDVPGGAEAFELAAKFCYGIN-------------- 105 (457)
Q Consensus 44 V~l~V-~~~~F~~HK~vLaa~S~yfr~mf~~-~-~-e~~~~~v~L~~~pGg~~~felvl~FcYt~~-------------- 105 (457)
|+|.. +|+.|.+||.+ |++|+|||+||.. + . |+.+..|.|++++ +.+++.|++|||+.+
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~--~~iL~kViey~~~h~~~~~~~~~~~~~~~ 79 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEK 79 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSC--HHHHHHHHHHHHHTTTCCC----------
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCcc--HHHHHHHHHHHHHcCcCCCCccccccccc
Confidence 67765 79999999999 9999999999997 3 4 5566789999995 999999999999887
Q ss_pred ------------cccCchhHhhHHHHHhhhccccccccchHHHHHHHHHHHHh
Q 012743 106 ------------FEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVA 146 (457)
Q Consensus 106 ------------i~it~~NV~~L~~AA~~Lqm~e~~~~~NL~~~ce~FL~~~v 146 (457)
+.++.+|+..|+.||+||+|.. |++.||.|+...+
T Consensus 80 ~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~------Lld~~c~~va~~i 126 (159)
T 2ast_A 80 RTDDIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVANMI 126 (159)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHHHH
T ss_pred chhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHH
Confidence 8999999999999999999997 9999999999986
No 22
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.30 E-value=3.7e-12 Score=106.60 Aligned_cols=79 Identities=16% Similarity=0.298 Sum_probs=66.1
Q ss_pred EEEEE-CCEEEeeccccccccChHHHHhhcCC---CCCCCceEecCCCCCCHHHHHHHHHHHh-----C---Cccc---c
Q 012743 44 VTVHV-GGTSFSLHKFPLVSKCGYIRKLVSVS---SEADLSVIEIPDVPGGAEAFELAAKFCY-----G---INFE---I 108 (457)
Q Consensus 44 V~l~V-~~~~F~~HK~vLaa~S~yfr~mf~~~---~e~~~~~v~L~~~pGg~~~felvl~FcY-----t---~~i~---i 108 (457)
|+|.- +|+.|.+||.+ |++|+|||+||+.. .|+....|.|++++ +.+++.+++||| + +++. |
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~--~~iL~kViey~~~h~~~~~~~~~i~~~~i 80 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPI 80 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSC--HHHHHHHHHHHHHHHHHTTCCSCCCCCCC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCC--HHHHHHHHHHHHHhcccCCCcCCCCcCcC
Confidence 45554 68999999999 99999999999973 45667789999995 999999999999 5 6777 9
Q ss_pred CchhHhhHHHHHhhhcc
Q 012743 109 NTENVAGLRCVAEYLEM 125 (457)
Q Consensus 109 t~~NV~~L~~AA~~Lqm 125 (457)
+++|+..|+.||+||+.
T Consensus 81 ~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 81 APEIALELLMAANFLDC 97 (97)
T ss_dssp CGGGHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHhhhCC
Confidence 99999999999999973
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.21 E-value=2.1e-11 Score=108.88 Aligned_cols=91 Identities=13% Similarity=0.284 Sum_probs=81.4
Q ss_pred EEEEE-CCEEEeeccccccccChHHHHhhcCCCCCCCceEecCCCCCCHHHHHHHHHHHhCCc-----------------
Q 012743 44 VTVHV-GGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIPDVPGGAEAFELAAKFCYGIN----------------- 105 (457)
Q Consensus 44 V~l~V-~~~~F~~HK~vLaa~S~yfr~mf~~~~e~~~~~v~L~~~pGg~~~felvl~FcYt~~----------------- 105 (457)
|+|.. +|+.|.+||.+ |..|+|||.|+.... ...|.|++++ +.+++.|++|||..+
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 77 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG---MDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKRTD 77 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC---CSSEECTTCC--HHHHHHHHHHHHHHTTCC--------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC---CCceecCCcC--HHHHHHHHHHHHHhccCCCccccccccccchh
Confidence 67776 68999999998 899999999998632 3479999995 899999999999654
Q ss_pred ---------cccCchhHhhHHHHHhhhccccccccchHHHHHHHHHHHHh
Q 012743 106 ---------FEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVA 146 (457)
Q Consensus 106 ---------i~it~~NV~~L~~AA~~Lqm~e~~~~~NL~~~ce~FL~~~v 146 (457)
+.++.+++..|+.||+||+|.. |++.||.|+...+
T Consensus 78 ~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~~i 121 (141)
T 1fs1_B 78 DIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVANMI 121 (141)
T ss_dssp ---HHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhCCHHHHHHHHHHHHHHhhhH------HHHHHHHHHHHHH
Confidence 7899999999999999999997 9999999999986
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=99.03 E-value=4.2e-11 Score=109.09 Aligned_cols=92 Identities=15% Similarity=0.280 Sum_probs=51.4
Q ss_pred EEEEE-CCEEEeeccccccccChHHHHhhcCCCCCCCceEecCCCCCCHHHHHHHHHHHhCCc-----------------
Q 012743 44 VTVHV-GGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIPDVPGGAEAFELAAKFCYGIN----------------- 105 (457)
Q Consensus 44 V~l~V-~~~~F~~HK~vLaa~S~yfr~mf~~~~e~~~~~v~L~~~pGg~~~felvl~FcYt~~----------------- 105 (457)
|+|.. +|+.|.+|+.+ |..|+||+.||.... ....|.|++|+ +.+++.|++|||..+
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~--~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 80 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC--VDNGVPLPNVT--SKILAKVIEYCKRHVEAAASKAEAVEGAATSD 80 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC--------------CCTTSC--HHHHHHHHHC----------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC--CCCceeCCcCc--HHHHHHHHHHHHHcccCCCccccccccccccc
Confidence 66664 79999999998 899999999998752 23478999995 899999999999865
Q ss_pred ----------cccCchhHhhHHHHHhhhccccccccchHHHHHHHHHHHHh
Q 012743 106 ----------FEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVA 146 (457)
Q Consensus 106 ----------i~it~~NV~~L~~AA~~Lqm~e~~~~~NL~~~ce~FL~~~v 146 (457)
+.++..++..|+.||+||+|.. |++.||.|+...+
T Consensus 81 ~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~~i 125 (160)
T 2p1m_A 81 DDLKAWDADFMKIDQATLFELILAANYLNIKN------LLDLTCQTVADMI 125 (160)
T ss_dssp --------------------CHHHHHHTTCHH------HHHHHHHHHHHTT
T ss_pred chhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHH
Confidence 5789999999999999999997 9999999999986
No 25
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.46 E-value=2.6e-07 Score=77.53 Aligned_cols=80 Identities=19% Similarity=0.209 Sum_probs=67.0
Q ss_pred eEEEEE-CCEEEeeccccccccChHHHHhhcCCCCCCCceEecCCCCCCHHHHHHHHHHHhCCc--------------cc
Q 012743 43 DVTVHV-GGTSFSLHKFPLVSKCGYIRKLVSVSSEADLSVIEIPDVPGGAEAFELAAKFCYGIN--------------FE 107 (457)
Q Consensus 43 DV~l~V-~~~~F~~HK~vLaa~S~yfr~mf~~~~e~~~~~v~L~~~pGg~~~felvl~FcYt~~--------------i~ 107 (457)
-|+|.- +|+.|.+++.+ |..|+++|.|+..+-+.....|.|++++ +.+++.|++|||.-+ ..
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~e~~~~~Iplp~V~--~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~ 81 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPFRESKGRIELKQFD--SHILEKAVEYLNYNLKYSGVSEDDDEIPEFE 81 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSSTTTCTTEEEETTSC--HHHHHHHHHHHHHHHHHHHHCSSCSSCCCCC
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhcccccCCCceecCCcC--HHHHHHHHHHHHHhcccCCCccccccCCCcc
Confidence 367776 79999999997 8999999999987433444689999995 899999999999522 36
Q ss_pred cCchhHhhHHHHHhhhcc
Q 012743 108 INTENVAGLRCVAEYLEM 125 (457)
Q Consensus 108 it~~NV~~L~~AA~~Lqm 125 (457)
+..+++..|+.||+||++
T Consensus 82 vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 82 IPTEMSLELLLAADYLSI 99 (99)
T ss_dssp CCHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHhCc
Confidence 788899999999999985
No 26
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.43 E-value=2.3e-07 Score=77.40 Aligned_cols=79 Identities=18% Similarity=0.292 Sum_probs=64.2
Q ss_pred EEEEE-CCEEEeeccccccccChHHHHhhcCC---CCCCCceEecCCCCCCHHHHHHHHHHHhCCc-----------ccc
Q 012743 44 VTVHV-GGTSFSLHKFPLVSKCGYIRKLVSVS---SEADLSVIEIPDVPGGAEAFELAAKFCYGIN-----------FEI 108 (457)
Q Consensus 44 V~l~V-~~~~F~~HK~vLaa~S~yfr~mf~~~---~e~~~~~v~L~~~pGg~~~felvl~FcYt~~-----------i~i 108 (457)
|+|.- +|+.|.+++.+ |..|++++.|+... .|+....|.|++++ +.+++.|++|||.-. ..+
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~i~~w~v 79 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPI 79 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCC--HHHHHHHHHHHHHHHHHHSCCSCCCCCCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCC--HHHHHHHHHHHHHccccCCCcccCCCccc
Confidence 56665 79999999997 89999999999863 34455689999995 899999999998522 468
Q ss_pred CchhHhhHHHHHhhhcc
Q 012743 109 NTENVAGLRCVAEYLEM 125 (457)
Q Consensus 109 t~~NV~~L~~AA~~Lqm 125 (457)
..+.+..|+.||+||++
T Consensus 80 d~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 80 APEIALELLMAANFLDC 96 (96)
T ss_dssp CTTTHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 88999999999999985
No 27
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.39 E-value=6.8e-07 Score=81.98 Aligned_cols=95 Identities=15% Similarity=0.281 Sum_probs=77.3
Q ss_pred eEEEEE-CCEEEeeccccccccChHHHHhhcCCCC-----CCCceEecCCCCCCHHHHHHHHHHHhCCc-----------
Q 012743 43 DVTVHV-GGTSFSLHKFPLVSKCGYIRKLVSVSSE-----ADLSVIEIPDVPGGAEAFELAAKFCYGIN----------- 105 (457)
Q Consensus 43 DV~l~V-~~~~F~~HK~vLaa~S~yfr~mf~~~~e-----~~~~~v~L~~~pGg~~~felvl~FcYt~~----------- 105 (457)
-|+|+- +|+.|.+++.+ |..|++++.|+..... .....|.|++++ +.+++.|++|||--+
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~~~~ 84 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVR--SSVLQKVIEWAEHHRDSNFPDEDDDD 84 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCC--HHHHHHHHHHHHHTTTCCCCC-----
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCC--HHHHHHHHHHHHHcccCCCccccccc
Confidence 466665 58999999997 7889999999986421 223679999995 899999999998421
Q ss_pred --------------cccCchhHhhHHHHHhhhccccccccchHHHHHHHHHHHHh
Q 012743 106 --------------FEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVA 146 (457)
Q Consensus 106 --------------i~it~~NV~~L~~AA~~Lqm~e~~~~~NL~~~ce~FL~~~v 146 (457)
+.+....+..|+.||.||+|.. |++.||.++...+
T Consensus 85 ~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~------Lldl~c~~vA~~i 133 (169)
T 3v7d_A 85 SRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKP------LLDAGCKVVAEMI 133 (169)
T ss_dssp ---CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHH------HHHHHHHHHHHHH
T ss_pred ccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHHH
Confidence 4577888999999999999997 9999999998875
No 28
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.37 E-value=6.5e-08 Score=81.67 Aligned_cols=91 Identities=5% Similarity=-0.086 Sum_probs=72.9
Q ss_pred HHhhhhchHHHHHHhchhhHHHHHHHHHHhhccccCCCCCCCCCCCCccccCCCCCCcccccchhhcccCChHHHHHHHH
Q 012743 156 VLHKSQGLLPIAEKVKLVGQCIDAIAYIACKENQFSGSGRAESGTDNAISDMVSHPKTIVDWWAEDLTVLRIDVFQRVLI 235 (457)
Q Consensus 156 ~l~~C~~l~~~Ae~~~iv~rCidsLa~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ww~eDl~~L~~d~~~rvI~ 235 (457)
.+.||.+++.+|+.|+ +..|..+|..++. . ++......+||..||.+.+..+|+
T Consensus 9 ~~~NCl~i~~~A~~~~-----~~~L~~~a~~fi~------~---------------nF~~v~~~~eFl~L~~~~L~~lL~ 62 (105)
T 2eqx_A 9 QVGNCLQVMWLADRHS-----DPELYTAAKHCAK------T---------------HLAQLQNTEEFLHLPHRLLTDIIS 62 (105)
T ss_dssp CTTTHHHHHHHHHHTT-----CHHHHHHHHHHHH------H---------------TCHHHHTSHHHHHSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcC-----CHHHHHHHHHHHH------H---------------HHHHHHhcccHhhCCHHHHHHHHc
Confidence 5789999999999998 3888888877663 1 223444579999999999988888
Q ss_pred HHHhcCCCchhHHHHHHHHHHhhhccccccCCCCCCCCccchHHHHHHHHHHHH
Q 012743 236 AMMARGFKQYALGPVLMLYAQKSLRGLEVFGKGRKKIEPHQEHEKRVVLETIVS 289 (457)
Q Consensus 236 a~~~~~~~ee~v~~al~~yak~~l~~~~~~~~~~~~~~~~~~~~~r~LLE~Iv~ 289 (457)
.. ..+|+.|++|+++|++++...+. .+...|+++|+.
T Consensus 63 sd---v~~E~~vf~av~~Wv~~d~~~R~--------------~~~~~Ll~~VR~ 99 (105)
T 2eqx_A 63 DG---VPCSQNPTEAIEAWINFNKEERE--------------AFAESLRTSLKE 99 (105)
T ss_dssp TC---EETTSCHHHHHHHHHHTTHHHHH--------------HHHHHHHHHCCE
T ss_pred CC---CCCHHHHHHHHHHHHHcCHHHHH--------------HHHHHHHHHHHH
Confidence 73 55999999999999999876532 677889998873
No 29
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.88 E-value=1.2e-05 Score=68.82 Aligned_cols=80 Identities=18% Similarity=0.273 Sum_probs=63.6
Q ss_pred eEEEE-ECCEEEeeccccccccChHHHHhhcCC---CCCCCceEecCCCCCCHHHHHHHHHHHhCCc-----------cc
Q 012743 43 DVTVH-VGGTSFSLHKFPLVSKCGYIRKLVSVS---SEADLSVIEIPDVPGGAEAFELAAKFCYGIN-----------FE 107 (457)
Q Consensus 43 DV~l~-V~~~~F~~HK~vLaa~S~yfr~mf~~~---~e~~~~~v~L~~~pGg~~~felvl~FcYt~~-----------i~ 107 (457)
-|+|. -+|+.|.+++. .|..|+.++.|+... .|.....|.|++++ +.+++.|++|||--+ ..
T Consensus 18 ~v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~i~~w~ 94 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFP 94 (112)
T ss_dssp EEEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC--------CEEECSSCC--HHHHHHHHHHHHHHHHHSSCSSCCCCCC
T ss_pred EEEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCcccccCCceeCCCCC--HHHHHHHHHHHHHhhhccCCcCCCCCcc
Confidence 36666 47999999999 578999999999863 24444689999995 899999999998421 36
Q ss_pred cCchhHhhHHHHHhhhcc
Q 012743 108 INTENVAGLRCVAEYLEM 125 (457)
Q Consensus 108 it~~NV~~L~~AA~~Lqm 125 (457)
+..+++..|+.||+||++
T Consensus 95 vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 95 IAPEIALELLMAANFLDC 112 (112)
T ss_dssp CCHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCc
Confidence 888999999999999986
No 30
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.88 E-value=3.8e-05 Score=65.01 Aligned_cols=93 Identities=20% Similarity=0.267 Sum_probs=72.9
Q ss_pred eEEEEECCEEEeeccccccccC-hHHHHhhcCCCC-----CCCceEecCCCCCCHHHHHHHHHHHhCCccccCc-hhHhh
Q 012743 43 DVTVHVGGTSFSLHKFPLVSKC-GYIRKLVSVSSE-----ADLSVIEIPDVPGGAEAFELAAKFCYGINFEINT-ENVAG 115 (457)
Q Consensus 43 DV~l~V~~~~F~~HK~vLaa~S-~yfr~mf~~~~e-----~~~~~v~L~~~pGg~~~felvl~FcYt~~i~it~-~NV~~ 115 (457)
=|+|+|||+.|...+..|.... .+|.+||....+ ....++-+ |- .|+.|+.|++|..+|++.+.. -+...
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DR--dp~~F~~IL~~lr~g~l~~p~~~~~~~ 83 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DR--DPTYFGPVLNYLRHGKLVINKDLAEEG 83 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CS--CHHHHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cC--ChHHHHHHHHHhCCCeeCCCCCCCHHH
Confidence 4788999999999999999885 578999976411 12334544 44 699999999999999988744 23567
Q ss_pred HHHHHhhhccccccccchHHHHHHHHHHH
Q 012743 116 LRCVAEYLEMTEDYAVGNLVGRAEAYLNE 144 (457)
Q Consensus 116 L~~AA~~Lqm~e~~~~~NL~~~ce~FL~~ 144 (457)
++..|+|+++++ |++.|++-+.+
T Consensus 84 l~~Ea~fy~l~~------L~~~l~~~i~~ 106 (107)
T 3drz_A 84 VLEEAEFYNITS------LIKLVKDKIRE 106 (107)
T ss_dssp HHHHHHHHTCHH------HHHHHHHHHHH
T ss_pred HHHHHHHCCCHH------HHHHHHHHHhc
Confidence 999999999998 99999876543
No 31
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=96.72 E-value=0.0028 Score=59.59 Aligned_cols=94 Identities=20% Similarity=0.261 Sum_probs=73.2
Q ss_pred eEEEEECCEEEeeccccccccC-hHHHHhhcCCCC-----CCCceEecCCCCCCHHHHHHHHHHHhCCccccCc-hhHhh
Q 012743 43 DVTVHVGGTSFSLHKFPLVSKC-GYIRKLVSVSSE-----ADLSVIEIPDVPGGAEAFELAAKFCYGINFEINT-ENVAG 115 (457)
Q Consensus 43 DV~l~V~~~~F~~HK~vLaa~S-~yfr~mf~~~~e-----~~~~~v~L~~~pGg~~~felvl~FcYt~~i~it~-~NV~~ 115 (457)
=|+|.|||..|..-+..|.... .+|.+||....+ ....++-| | ..|..|+.|++|.-+|++.+.. -....
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-D--RDP~~F~~ILnyLRtG~L~lP~~~~~~~ 89 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-D--RDPTYFGPVLNYLRHGKLVINKDLAEEG 89 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-C--SCSTTHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-c--CChHHHHHHHHHhcCCccCCCCCCCHHH
Confidence 4678999999999999998775 488999876311 12334544 2 3588999999999999998743 23467
Q ss_pred HHHHHhhhccccccccchHHHHHHHHHHHH
Q 012743 116 LRCVAEYLEMTEDYAVGNLVGRAEAYLNEV 145 (457)
Q Consensus 116 L~~AA~~Lqm~e~~~~~NL~~~ce~FL~~~ 145 (457)
++.-|+|+++++ |++.|++-+.+.
T Consensus 90 l~eEA~FygL~~------Lv~~l~~~i~er 113 (202)
T 3drx_A 90 VLEEAEFYNITS------LIKLVKDKIRER 113 (202)
T ss_dssp HHHHHHHTTCHH------HHHHHHHHHHHH
T ss_pred HHHHHHHCCcHH------HHHHHHHHHHHH
Confidence 999999999998 999999888765
No 32
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=96.09 E-value=0.0019 Score=55.39 Aligned_cols=82 Identities=13% Similarity=0.084 Sum_probs=62.5
Q ss_pred EEEEECCEEEeeccccccccCh-HHHHhhcCCC--CCCCceEecCCCCCCHHHHHHHHHHHhCCccccCc-hhHhhHHHH
Q 012743 44 VTVHVGGTSFSLHKFPLVSKCG-YIRKLVSVSS--EADLSVIEIPDVPGGAEAFELAAKFCYGINFEINT-ENVAGLRCV 119 (457)
Q Consensus 44 V~l~V~~~~F~~HK~vLaa~S~-yfr~mf~~~~--e~~~~~v~L~~~pGg~~~felvl~FcYt~~i~it~-~NV~~L~~A 119 (457)
|+|.|||+.|...+..|....+ .|.+||.... .....++-+. ..|..|..|++|.-+|++.+.. -.+..++.-
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~FiD---Rdp~~F~~ILnylR~G~l~~p~~~~~~~~~~E 83 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFFD---RHPGVFAQIINYYRSGKLHYPTDVCGPLFEEE 83 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEEC---SCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHH
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEEe---cChHHHHHHHHHhcCCCCCCCCcccHHHHHHH
Confidence 7899999999999999987643 4566776431 1233455553 2578999999999999998754 356789999
Q ss_pred Hhhhccccc
Q 012743 120 AEYLEMTED 128 (457)
Q Consensus 120 A~~Lqm~e~ 128 (457)
|+|+++++.
T Consensus 84 a~fy~i~~~ 92 (115)
T 3kvt_A 84 LEFWGLDSN 92 (115)
T ss_dssp HHHHTCCGG
T ss_pred HHHhCCChH
Confidence 999999983
No 33
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=95.14 E-value=0.019 Score=49.73 Aligned_cols=80 Identities=13% Similarity=0.144 Sum_probs=58.0
Q ss_pred eeEEEEECCEEEeeccccccccChHHHHhhcCC-C----CCCCceEecCCCCCCHHHHHHHHHHHhCCccccCc-hhHhh
Q 012743 42 SDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVS-S----EADLSVIEIPDVPGGAEAFELAAKFCYGINFEINT-ENVAG 115 (457)
Q Consensus 42 ~DV~l~V~~~~F~~HK~vLaa~S~yfr~mf~~~-~----e~~~~~v~L~~~pGg~~~felvl~FcYt~~i~it~-~NV~~ 115 (457)
.=|+|.|||+.|..-+..|...-+ .|+... + .....++-| +..|..|+.|++|.-+|++.+.. ..+..
T Consensus 13 ~~V~LNVGG~~F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~g~~Fi---DRdp~~F~~ILnflR~G~l~~p~~~~~~~ 86 (124)
T 1s1g_A 13 ELIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECISA 86 (124)
T ss_dssp CEEEEEETTEEEEEEHHHHTTSTT---SSTTSSGGGGTBCSSSCSEEE---CSCHHHHHHHHHHHHHSCBCCCTTSCHHH
T ss_pred CEEEEEeCCEEEEEeHHHHhcCCC---ceecccCCcccccCCCCcEEE---cCChHHHHHHHHHHhcCCCCCCCCcCHHH
Confidence 357899999999999888865433 233321 1 112334444 33699999999999999988644 24688
Q ss_pred HHHHHhhhcccc
Q 012743 116 LRCVAEYLEMTE 127 (457)
Q Consensus 116 L~~AA~~Lqm~e 127 (457)
++.-|+|+++++
T Consensus 87 l~~Ea~fy~i~~ 98 (124)
T 1s1g_A 87 YDDELAFYGILP 98 (124)
T ss_dssp HHHHHHHTTCCG
T ss_pred HHHHHHHcCCCh
Confidence 999999999998
No 34
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=94.91 E-value=0.022 Score=47.59 Aligned_cols=81 Identities=11% Similarity=0.052 Sum_probs=57.9
Q ss_pred EEEEECCEEEeeccccccccCh-HHHHhhcCC--CCCCCceEecCCCCCCHHHHHHHHHHHhC-CccccCc-hhHhhHHH
Q 012743 44 VTVHVGGTSFSLHKFPLVSKCG-YIRKLVSVS--SEADLSVIEIPDVPGGAEAFELAAKFCYG-INFEINT-ENVAGLRC 118 (457)
Q Consensus 44 V~l~V~~~~F~~HK~vLaa~S~-yfr~mf~~~--~e~~~~~v~L~~~pGg~~~felvl~FcYt-~~i~it~-~NV~~L~~ 118 (457)
|+|.|||+.|...+..|...-+ .+.+|+... -.....++-+. -.|..|+.|++|.-+ |++.+.. ..+..++.
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFiD---Rdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~ 79 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFFD---RNRPSFDAILYFYQSGGRLRRPVNVPLDVFSE 79 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEEC---SCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEEc---CChHHHHHHHHHHhcCCcccCCCCCCHHHHHH
Confidence 7899999999999998865422 334444321 11233455552 247899999999998 8987633 34678999
Q ss_pred HHhhhcccc
Q 012743 119 VAEYLEMTE 127 (457)
Q Consensus 119 AA~~Lqm~e 127 (457)
-|+|.++++
T Consensus 80 Ea~fy~i~~ 88 (100)
T 1t1d_A 80 EIKFYELGE 88 (100)
T ss_dssp HHHHTTCCH
T ss_pred HHHHcCCCH
Confidence 999999997
No 35
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=94.06 E-value=0.016 Score=48.77 Aligned_cols=85 Identities=13% Similarity=0.191 Sum_probs=60.4
Q ss_pred EEEEECCEEEeeccccccccChHHHHhhcCC-C----CCCCceEecCCCCCCHHHHHHHHHHHhCCccccCc-hhHhhHH
Q 012743 44 VTVHVGGTSFSLHKFPLVSKCGYIRKLVSVS-S----EADLSVIEIPDVPGGAEAFELAAKFCYGINFEINT-ENVAGLR 117 (457)
Q Consensus 44 V~l~V~~~~F~~HK~vLaa~S~yfr~mf~~~-~----e~~~~~v~L~~~pGg~~~felvl~FcYt~~i~it~-~NV~~L~ 117 (457)
|+|.|||+.|...+..|....+ .|+... + .....++-+. -.|+.|+.|++|.-+|++.+.. .++..++
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~FiD---Rdp~~F~~ILnflR~g~l~~p~~~~~~~l~ 75 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFFD---RDPDIFRHILNFYRTGKLHYPRHECISAYD 75 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEEC---SCTTTHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEEe---CCcHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 7899999999999888865432 233321 1 1123345442 2589999999999999987644 3478899
Q ss_pred HHHhhhccccccccchHHHHHH
Q 012743 118 CVAEYLEMTEDYAVGNLVGRAE 139 (457)
Q Consensus 118 ~AA~~Lqm~e~~~~~NL~~~ce 139 (457)
.-|+|+++++. +++.||
T Consensus 76 ~Ea~fy~i~~l-----~~~~cc 92 (105)
T 1nn7_A 76 EELAFFGLIPE-----IIGDCC 92 (105)
T ss_dssp HHHHHHTCCSC-----CBCHHH
T ss_pred HHHHHcCCCHH-----HHHHHH
Confidence 99999999983 456555
No 36
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=94.01 E-value=0.024 Score=50.16 Aligned_cols=82 Identities=12% Similarity=0.130 Sum_probs=59.4
Q ss_pred CCeeEEEEECCEEEeeccccccccChHHHHhhcCC-C----CCCCceEecCCCCCCHHHHHHHHHHHhCCccccCc-hhH
Q 012743 40 IPSDVTVHVGGTSFSLHKFPLVSKCGYIRKLVSVS-S----EADLSVIEIPDVPGGAEAFELAAKFCYGINFEINT-ENV 113 (457)
Q Consensus 40 ~~~DV~l~V~~~~F~~HK~vLaa~S~yfr~mf~~~-~----e~~~~~v~L~~~pGg~~~felvl~FcYt~~i~it~-~NV 113 (457)
...=|+|.|||+.|...+..|...-+ .|+... + .....++-| ...|..|+.|++|.-+|++.+.. ..+
T Consensus 33 ~~~~V~LNVGG~~F~T~~~TL~~~P~---S~L~~~~~~~~~~~~~g~yFi---DRdp~~F~~ILnflR~G~l~~p~~~~~ 106 (140)
T 2nz0_B 33 QDELIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECI 106 (140)
T ss_dssp CCCEEEEEETTEEEEEEHHHHHTCTT---STTTSGGGGGSEETTTTEEEE---CSCHHHHHHHHHHHHHSSBCCCTTSCH
T ss_pred CCCEEEEEECCEEEEeeHHHHhcCCC---eeecccCCcccccCCCCeEEE---eCCcHHHHHHHHHHhcCCcCCCCCcCH
Confidence 34568899999999999888865432 233331 1 112344544 33699999999999999988743 347
Q ss_pred hhHHHHHhhhcccc
Q 012743 114 AGLRCVAEYLEMTE 127 (457)
Q Consensus 114 ~~L~~AA~~Lqm~e 127 (457)
..++.-|+|+++++
T Consensus 107 ~~l~eEa~fy~i~~ 120 (140)
T 2nz0_B 107 SAYDDELAFYGILP 120 (140)
T ss_dssp HHHHHHHHHHTCCG
T ss_pred HHHHHHHHHcCCCh
Confidence 88999999999998
No 37
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=72.92 E-value=1.1 Score=28.06 Aligned_cols=16 Identities=38% Similarity=0.391 Sum_probs=14.0
Q ss_pred hhHhhHHHHHhhhccc
Q 012743 111 ENVAGLRCVAEYLEMT 126 (457)
Q Consensus 111 ~NV~~L~~AA~~Lqm~ 126 (457)
.||+.|+.||+||+=-
T Consensus 3 ~nvq~LLeAAeyLErr 18 (26)
T 1pd7_B 3 MNIQMLLEAADYLERR 18 (26)
T ss_dssp CSTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH
Confidence 5999999999999844
No 38
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=70.35 E-value=4.4 Score=42.74 Aligned_cols=84 Identities=8% Similarity=0.027 Sum_probs=57.0
Q ss_pred eeEEEEECCEEEeeccccccccChH-HHHhhcCC--CCCCCceEecCCCCCCHHHHHHHHHHHhC-CccccCc-hhHhhH
Q 012743 42 SDVTVHVGGTSFSLHKFPLVSKCGY-IRKLVSVS--SEADLSVIEIPDVPGGAEAFELAAKFCYG-INFEINT-ENVAGL 116 (457)
Q Consensus 42 ~DV~l~V~~~~F~~HK~vLaa~S~y-fr~mf~~~--~e~~~~~v~L~~~pGg~~~felvl~FcYt-~~i~it~-~NV~~L 116 (457)
-=|+|.|||+.|...+.-|...-+- +-+|+... -+....++-+ +-.|+.|+.+++|..+ |++.+.. -.+..+
T Consensus 52 ~~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~---DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~ 128 (514)
T 2r9r_B 52 ERVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF---DRNRPSFDAILYYYQSGGRLRRPVNVPLDIF 128 (514)
T ss_dssp CEEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE---CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHH
T ss_pred CEEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE---cCChHHHHHHHHHHhcCCccccCCcccHHHH
Confidence 3578899999999998888643211 11222211 1123345554 3369999999999999 9987643 245678
Q ss_pred HHHHhhhccccc
Q 012743 117 RCVAEYLEMTED 128 (457)
Q Consensus 117 ~~AA~~Lqm~e~ 128 (457)
..-|+|.++.+.
T Consensus 129 ~~E~~f~~i~~~ 140 (514)
T 2r9r_B 129 SEEIRFYELGEE 140 (514)
T ss_dssp HHHHHHTTCCHH
T ss_pred HHHHHhcCCCHH
Confidence 899999999973
No 39
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=49.37 E-value=7.9 Score=32.66 Aligned_cols=33 Identities=12% Similarity=0.025 Sum_probs=25.4
Q ss_pred hhcCCCCCChhHHHHHHHhcCCccccCCCchhHHHHHHHhhccc
Q 012743 403 EIATDRNLSVAKFISLAELIPEQSRITEDGMYRAIDIYLKVHYE 446 (457)
Q Consensus 403 EiA~D~~L~~~kF~~Lae~lPd~aR~~~DgLYrAIDiYLk~Hp~ 446 (457)
|...|.+.+|.+..+.+ .|+++|||-||-+||.
T Consensus 90 e~~~~~~~~p~~~~~~~-----------~~~~k~ie~yll~~p~ 122 (122)
T 1vjh_A 90 EKVHKDIDDPHSIIDES-----------VKYFKKLDEAILNFKE 122 (122)
T ss_dssp EESSTTSCCSHHHHHHH-----------HHHHHHHHHHHHHC--
T ss_pred EECCCCCCCHHHHHHHH-----------HHHHHHHHHHHhhCCC
Confidence 44667788888887765 6789999999999984
No 40
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.77 E-value=18 Score=29.37 Aligned_cols=36 Identities=14% Similarity=0.048 Sum_probs=32.4
Q ss_pred ccccCchhHhhHHHHHhhhccccccccchHHHHHHHHHHHHh
Q 012743 105 NFEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVA 146 (457)
Q Consensus 105 ~i~it~~NV~~L~~AA~~Lqm~e~~~~~NL~~~ce~FL~~~v 146 (457)
.=.|+++|...++..|+.++.++ |.++|.+|+.+..
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~------L~~~a~~fi~~nF 40 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPE------LYTAAKHCAKTHL 40 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHHTC
T ss_pred hccCCHHHHHHHHHHHHHcCCHH------HHHHHHHHHHHHH
Confidence 44689999999999999999997 9999999998865
No 41
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=32.27 E-value=48 Score=28.35 Aligned_cols=46 Identities=17% Similarity=0.187 Sum_probs=36.6
Q ss_pred HHHHHHHHHHhCCccccCchhHhhHHHHHhhhccccccccchHHHHHHHHHHHHh
Q 012743 92 EAFELAAKFCYGINFEINTENVAGLRCVAEYLEMTEDYAVGNLVGRAEAYLNEVA 146 (457)
Q Consensus 92 ~~felvl~FcYt~~i~it~~NV~~L~~AA~~Lqm~e~~~~~NL~~~ce~FL~~~v 146 (457)
...+.+.+|+-. .++++|+..++..|+..+.++ |.+.|..|+.+..
T Consensus 119 ~l~~~c~~~l~~---~l~~~n~~~~~~~A~~~~~~~------L~~~~~~~i~~~~ 164 (172)
T 3htm_A 119 RLKVMCEDALCS---NLSVENAAEILILADLHSADQ------LKTQAVDFINYHA 164 (172)
T ss_dssp HHHHHHHHHHHH---TCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHH---hCCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHHH
Confidence 444455555542 578999999999999999997 9999999998764
No 42
>3b0b_C CENP-X, centromere protein X; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus} PDB: 3vh5_D 3vh6_D
Probab=23.01 E-value=58 Score=25.79 Aligned_cols=43 Identities=16% Similarity=0.167 Sum_probs=32.4
Q ss_pred CccccHHHHHHHHHHHhccccCCCCCccCCCCCCCCCCchhhhHHHhhhhhhhhhh
Q 012743 349 DTLFDVDTVHRILMNYLDYQVDGNRLSFSGDNEYVSSPLSDMERVGKLMENYLAEI 404 (457)
Q Consensus 349 ~~~yDVd~V~ril~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~VakLvD~YLaEi 404 (457)
+..++-+++.||+..+..... + .-+..++..+|+++|-|..|.
T Consensus 6 ~~~~~~~lI~ril~~~f~~~k-----------t--rI~~dAl~l~aeyl~iFV~EA 48 (81)
T 3b0b_C 6 EGGFRKETVERLLRLHFRDGR-----------T--RVNGDALLLMAELLKVFVREA 48 (81)
T ss_dssp -CCCCHHHHHHHHHHHCCSTT-----------C--EECHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhccCc-----------c--cccHHHHHHHHHHHHHHHHHH
Confidence 356889999999998665432 1 234568999999999999983
No 43
>4dra_E Centromere protein X; DNA binding complex, DNA damage repair, histone-fold, DNA BI protein; 2.41A {Homo sapiens} PDB: 4drb_J
Probab=20.18 E-value=52 Score=26.33 Aligned_cols=43 Identities=14% Similarity=0.183 Sum_probs=32.1
Q ss_pred CccccHHHHHHHHHHHhccccCCCCCccCCCCCCCCCCchhhhHHHhhhhhhhhhh
Q 012743 349 DTLFDVDTVHRILMNYLDYQVDGNRLSFSGDNEYVSSPLSDMERVGKLMENYLAEI 404 (457)
Q Consensus 349 ~~~yDVd~V~ril~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~VakLvD~YLaEi 404 (457)
+..+.-+++.||+..+...+. + .-+..++..+++++|-|..|.
T Consensus 10 ~~~i~~~li~ril~~~F~~~k-----------T--kIs~dAl~l~aeyl~iFV~EA 52 (84)
T 4dra_E 10 GSGFRKELVSRLLHLHFKDDK-----------T--KVSGDALQLMVELLKVFVVEA 52 (84)
T ss_dssp -CCCCHHHHHHHHHTTCSSTT-----------C--EECHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhcCCC-----------c--cccHHHHHHHHHHHHHHHHHH
Confidence 457889999999996665332 1 234568999999999999883
Done!