BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012744
(457 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights
Into The Structural Basis Of A Multifunctional (Iso)
Flavonoid Glycosyltransferase
Length = 482
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 155/477 (32%), Positives = 231/477 (48%), Gaps = 36/477 (7%)
Query: 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIG-EQIHL 62
PHVV+IP P QGH+ PL +L++ L G ITFVN+EYNHKR+L+S K + G +
Sbjct: 9 PHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNF 68
Query: 63 VSIPDGMEPWDDRSDMRKLLEK-----RLQVMPGKLEGLIEEIHGREGEKTACLIADGAA 117
SIPDG+ P + D+ + + R + E L H CL++D
Sbjct: 69 ESIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCM 128
Query: 118 GWAIEVAEKMKLRRXXXXXXXXXXXXXXFSIPKLIEDGVIN-------SNGT-PIKEQMI 169
+ I+ AE+ +L +E G+I +NG K I
Sbjct: 129 SFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWI 188
Query: 170 QLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNMRATRAADFQLCNSTYELEGGAF-- 227
N + T + M +FF + + + T L N+ ELE
Sbjct: 189 PGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTI----LLNTFNELESDVINA 244
Query: 228 --SMIPELLPIGPLLA-------SNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGS 278
S IP + PIGPL + ++L + ED++CL+WL+ ++ SV+YV FGS
Sbjct: 245 LSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGS 304
Query: 279 HTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQ 338
TV+ Q E A GL C +SFLW++RPD+ + + F +A RG + SW PQ
Sbjct: 305 TTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQD 364
Query: 339 KVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLRLERNQ 398
KVL HPSI F++HCGWNSTTE + GVP LCWPFFADQ + +IC+ W++G+ ++ N
Sbjct: 365 KVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTN- 423
Query: 399 SGIIGREEIKNKVDQVL-GD--QNFXXXXXXXXXXXXSSVREGGSSNKAIQNFVQSI 452
+ REE+ +++V+ GD + + R GG S + ++ +
Sbjct: 424 ---VKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDV 477
>pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VCH|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VG8|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
Length = 480
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 129/444 (29%), Positives = 206/444 (46%), Gaps = 53/444 (11%)
Query: 3 SPHVVVIPNPEQGHVIPLLELSQNLAK-HGLRITFVNSEYNHKRVLESLEGKNYIGEQIH 61
+PHV +IP+P GH+IPL+E ++ L HGL +TFV + EG ++
Sbjct: 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAG----------EGPPSKAQRTV 55
Query: 62 LVSIPDGME----PWDDRSDMRK--LLEKRLQVMPGKLEGLIEEIHG---REGEKTACLI 112
L S+P + P D +D+ +E R+ + + + ++ G L+
Sbjct: 56 LDSLPSSISSVFLPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALV 115
Query: 113 ADGAAGWAIEVAEKMKLRRXXXXXXXXXXXXXXFSIPKLIEDGVINSNGTPIKEQMIQLA 172
D A +VA + + +PKL D ++ + E ++ L
Sbjct: 116 VDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKL--DETVSCEFRELTEPLM-LP 172
Query: 173 PNMPAISTGELFWTGIGDLTMQKFFFDFMVKNMRATRAADFQLCNSTYELEGGAFSMI-- 230
+P G+ F D + + +++ N + + A+ L N+ +ELE A +
Sbjct: 173 GCVPV--AGKDFLDPAQD--RKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQE 228
Query: 231 -----PELLPIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTVLEQN 285
P + P+GPL+ + E+S+CL+WLD + SV+YV+FGS L
Sbjct: 229 PGLDKPPVYPVGPLVNIGKQEAKQT----EESECLKWLDNQPLGSVLYVSFGSGGTLTCE 284
Query: 286 QFQELALGLEICNRSFLWVVRPDITNDANDAY-------------PEGFRERVAARGQMI 332
Q ELALGL + FLWV+R + AN +Y P GF ER RG +I
Sbjct: 285 QLNELALGLADSEQRFLWVIR-SPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVI 343
Query: 333 S-WSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVG 391
W+PQ +VL HPS F++HCGWNST E V +G+P + WP +A+Q MN + + +
Sbjct: 344 PFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAA 403
Query: 392 LRLERNQSGIIGREEIKNKVDQVL 415
LR G++ REE+ V ++
Sbjct: 404 LRPRAGDDGLVRREEVARVVKGLM 427
>pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp
pdb|3HBJ|A Chain A, Structure Of Ugt78g1 Complexed With Udp
Length = 454
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 187/421 (44%), Gaps = 27/421 (6%)
Query: 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGK-NYIGEQIHLV 63
HV V+ P H PLL L + +A ++TF ++L + N I
Sbjct: 15 HVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTN--DTLFSRSNEFLPNIKYY 72
Query: 64 SIPDGM-EPWDDRSDMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAGWAIE 122
++ DG+ + + + R+ + ++ M + +I+E G+ CL+ D + +
Sbjct: 73 NVHDGLPKGYVSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGAD 132
Query: 123 VAEKMKLRRXXXXXXXXXXXXXXFSIPKLIEDGVINSNGTPIKEQMIQLAPNMPAISTGE 182
+AE+M + LI + + +K I + P P + +
Sbjct: 133 LAEEMHAKWVPLWTAGPHSLLTHVYT-DLIREKTGSKEVHDVKS--IDVLPGFPELKASD 189
Query: 183 LFWTGIGDLTMQKFFFDFMVKNM-----RATRAADFQLCNSTYELEGGAFSMIPELLPIG 237
L I D+ + F M+ M RA A +E S LL +G
Sbjct: 190 LPEGVIKDIDVP---FATMLHKMGLELPRANAVAINSFATIHPLIENELNSKFKLLLNVG 246
Query: 238 PLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTVLEQNQFQELALGLEIC 297
P + + + ++ CLEWLDQ + +SV+Y++FGS ++ LA LE C
Sbjct: 247 PFNLT-----TPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEEC 301
Query: 298 NRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCFMSHCGWNS 357
F+W R D + P+GF ER +G++++W+PQ ++L H S+ F++H GWNS
Sbjct: 302 GFPFIWSFR----GDPKEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNS 357
Query: 358 TTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGD 417
E + GVP + PFF DQ +NT V ++G+ ++ +G++ +E IK ++ +
Sbjct: 358 VLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVD---NGVLTKESIKKALELTMSS 414
Query: 418 Q 418
+
Sbjct: 415 E 415
>pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C1Z|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C9Z|A Chain A, Structure And Activity Of A Flavonoid 3-0
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
Length = 456
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 203/461 (44%), Gaps = 29/461 (6%)
Query: 2 SSPHVVVIPNPEQGHVIPLLELSQNLAK---HGLRITFVNSEYNHKRVLESLEGKNYIGE 58
++PHV V+ P H PLL + + LA H + F S+ N +S+
Sbjct: 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQC--- 62
Query: 59 QIHLVSIPDGM-EPWDDRSDMRKLLEKRLQVMPGKL-EGLIEEIHGREGEKTACLIADGA 116
I I DG+ E + ++ +E + P +G++ + G +CL+AD
Sbjct: 63 NIKSYDISDGVPEGYVFAGRPQEDIELFTRAAPESFRQGMVMAV-AETGRPVSCLVADAF 121
Query: 117 AGWAIEVAEKMKLRRXXXXXXXXXXXXXXFSIPKLIED-GVINSNGTPIKEQMIQLAPNM 175
+A ++A +M + I ++ E GV G +++++ P M
Sbjct: 122 IWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQGR--EDELLNFIPGM 179
Query: 176 PAISTGELFWTGIGDLTMQKFFFDFMVKNMRATRAADFQLCNSTYELEGGAF----SMIP 231
+ +L GI + F + + + A NS EL+ S +
Sbjct: 180 SKVRFRDL-QEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLK 238
Query: 232 ELLPIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTVLEQNQFQELA 291
L IGP N + + +P + CL+WL +R+ SV+Y++FG+ T + L+
Sbjct: 239 TYLNIGPF---NLI--TPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALS 293
Query: 292 LGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCFMS 351
LE F+W +R + A PEGF E+ G ++ W+PQ +VL H ++ F++
Sbjct: 294 EALEASRVPFIWSLR----DKARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVT 349
Query: 352 HCGWNSTTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLRLERNQSGIIGREEIKNKV 411
HCGWNS E V+ GVP +C PFF DQ +N + DV ++G+R+E G+ + + +
Sbjct: 350 HCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE---GGVFTKSGLMSCF 406
Query: 412 DQVLGDQNFXXXXXXXXXXXXSSVREGGSSNKAIQNFVQSI 452
DQ+L + ++ R G + +NF+ +
Sbjct: 407 DQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLV 447
>pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1
pdb|2ACV|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1
Length = 463
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 115/231 (49%), Gaps = 15/231 (6%)
Query: 230 IPELLPIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTV-LEQNQFQ 288
IP + +GPLL N D L+WLD++ SV+++ FGS V +Q +
Sbjct: 238 IPPIYAVGPLLDLKGQPNPKLDQAQHD-LILKWLDEQPDKSVVFLCFGSMGVSFGPSQIR 296
Query: 289 ELALGLEICNRSFLWVVRPDITNDA-NDAYPEGFRE--RVAARGQMISWSPQQKVLTHPS 345
E+ALGL+ FLW +N A +PEGF E + +G + W+PQ +VL H +
Sbjct: 297 EIALGLKHSGVRFLW------SNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKA 350
Query: 346 ISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLRLE---RNQSGII 402
I F+SHCGWNS E + GVP L WP +A+Q +N + W VGL L R S ++
Sbjct: 351 IGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVV 410
Query: 403 GREEIKNKVDQVLG-DQNFXXXXXXXXXXXXSSVREGGSSNKAIQNFVQSI 452
EEI+ + ++ D ++V +GGSS ++ + I
Sbjct: 411 AAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDI 461
>pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
pdb|2ACW|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
Length = 465
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 115/231 (49%), Gaps = 15/231 (6%)
Query: 230 IPELLPIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTV-LEQNQFQ 288
IP + +GPLL N D L+WLD++ SV+++ FGS V +Q +
Sbjct: 238 IPPIYAVGPLLDLKGQPNPKLDQAQHD-LILKWLDEQPDKSVVFLCFGSMGVSFGPSQIR 296
Query: 289 ELALGLEICNRSFLWVVRPDITNDA-NDAYPEGFRE--RVAARGQMISWSPQQKVLTHPS 345
E+ALGL+ FLW +N A +PEGF E + +G + W+PQ +VL H +
Sbjct: 297 EIALGLKHSGVRFLW------SNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKA 350
Query: 346 ISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLRLE---RNQSGII 402
I F+SHCGWNS E + GVP L WP +A+Q +N + W VGL L R S ++
Sbjct: 351 IGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVV 410
Query: 403 GREEIKNKVDQVLG-DQNFXXXXXXXXXXXXSSVREGGSSNKAIQNFVQSI 452
EEI+ + ++ D ++V +GGSS ++ + I
Sbjct: 411 AAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDI 461
>pdb|2IYA|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
pdb|2IYA|B Chain B, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
Length = 424
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 334 WSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLR 393
W PQ +LT S F++H G ST E +SN VP + P A+Q MN I ++ +G
Sbjct: 312 WVPQLDILT--KASAFITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVEL-GLGRH 368
Query: 394 LERNQSGIIGREEIKNKVDQVLGD 417
+ R+Q + E+++ V V D
Sbjct: 369 IPRDQ---VTAEKLREAVLAVASD 389
>pdb|2O6L|A Chain A, Crystal Structure Of The Udp-Glucuronic Acid Binding
Domain Of The Human Drug Metabolizing
Udp-Glucuronosyltransferase 2b7
pdb|2O6L|B Chain B, Crystal Structure Of The Udp-Glucuronic Acid Binding
Domain Of The Human Drug Metabolizing
Udp-Glucuronosyltransferase 2b7
Length = 170
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 330 QMISWSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQFMNTTY 383
++ W PQ +L HP F++H G N E + +G+P + P FADQ N +
Sbjct: 71 RLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPXVGIPLFADQPDNIAH 124
>pdb|3OTG|A Chain A, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp Bound Form
pdb|3OTH|A Chain A, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp And Calicheamicin Alpha3i
Bound Form
pdb|3OTH|B Chain B, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp And Calicheamicin Alpha3i
Bound Form
Length = 412
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 45/125 (36%), Gaps = 11/125 (8%)
Query: 255 EDSKCLEWLDQRQ-ANSVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDA 313
E WL R A ++Y+ G+ + + GL + L P +
Sbjct: 227 EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLDVSG 286
Query: 314 NDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPF 373
P R + SW PQ +L H + + H G +T + GVP L +P+
Sbjct: 287 LGEVPANVR--------LESWVPQAALLPH--VDLVVHHGGSGTTLGALGAGVPQLSFPW 336
Query: 374 FADQF 378
D F
Sbjct: 337 AGDSF 341
>pdb|2IYF|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
pdb|2IYF|B Chain B, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
Length = 430
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 334 WSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQFMNTTYI 384
W PQ +L + F++H G + EG++ P + P DQF N +
Sbjct: 290 WVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADML 338
>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium
Smegmatis
Length = 454
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 55 YIGEQIHLVSIPDGMEPWDDRSDMRKLLEKRLQVMPGKLEGL---IEEIHGREGEKTACL 111
Y+ Q+ V D P +D K L+ ++ V+ G G+ I E+ R+G +
Sbjct: 188 YVDGQVFRVGAADSTPP----ADWDKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAI 243
Query: 112 IADGAAGWAIEVAEKM 127
DGAA VA+K+
Sbjct: 244 DVDGAAEDLKRVADKV 259
>pdb|3NH6|A Chain A, Nucleotide Binding Domain Of Human Abcb6 (Apo Structure)
pdb|3NH9|A Chain A, Nucleotide Binding Domain Of Human Abcb6 (Atp Bound
Structure)
pdb|3NHA|A Chain A, Nucleotide Binding Domain Of Human Abcb6 (Adp Mg Bound
Structure)
pdb|3NHB|A Chain A, Nucleotide Binding Domain Of Human Abcb6 (Adp Bound
Structure)
Length = 306
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 311 NDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSI 346
+DA A+PEG+R +V RG +S +Q+V +I
Sbjct: 170 HDAIMAFPEGYRTQVGERGLKLSGGEKQRVAIARTI 205
>pdb|2P6P|A Chain A, X-Ray Crystal Structure Of C-C Bond-Forming
Dtdp-D-Olivose-Transferase Urdgt2
pdb|2P6P|B Chain B, X-Ray Crystal Structure Of C-C Bond-Forming
Dtdp-D-Olivose-Transferase Urdgt2
Length = 384
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 313 ANDAYPEGFRERVA-ARGQMISWSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCW 371
A D E R V AR + W+P V P+ + H G ST G+S GVP L
Sbjct: 251 APDTVAEALRAEVPQAR---VGWTPLDVV--APTCDLLVHHAGGVSTLTGLSAGVPQLLI 305
Query: 372 P 372
P
Sbjct: 306 P 306
>pdb|3IA7|A Chain A, Crystal Structure Of Calg4, The Calicheamicin
Glycosyltransferase
pdb|3IA7|B Chain B, Crystal Structure Of Calg4, The Calicheamicin
Glycosyltransferase
Length = 402
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 14 QGHVIPLLELSQNLAKHGLRITFVNS 39
GHV P L L LA+ G RIT+V +
Sbjct: 15 HGHVYPSLGLVSELARRGHRITYVTT 40
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,226,018
Number of Sequences: 62578
Number of extensions: 527975
Number of successful extensions: 1103
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1074
Number of HSP's gapped (non-prelim): 24
length of query: 457
length of database: 14,973,337
effective HSP length: 102
effective length of query: 355
effective length of database: 8,590,381
effective search space: 3049585255
effective search space used: 3049585255
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)