Query 012744
Match_columns 457
No_of_seqs 137 out of 1203
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 15:23:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012744.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012744hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 9.5E-71 3.3E-75 532.1 37.1 431 3-453 13-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 5.6E-66 1.9E-70 509.7 39.0 450 1-455 6-480 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 5.5E-63 1.9E-67 486.5 42.9 435 3-454 6-469 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 1.5E-63 5E-68 487.4 37.1 436 3-455 7-453 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 9E-61 3.1E-65 469.1 38.1 428 3-453 9-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 6.5E-47 2.2E-51 369.6 35.4 393 1-449 10-417 (424)
7 4amg_A Snogd; transferase, pol 100.0 2.2E-45 7.7E-50 356.2 23.1 339 3-433 22-384 (400)
8 1iir_A Glycosyltransferase GTF 100.0 1.4E-43 4.9E-48 344.7 29.6 378 4-454 1-400 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 4.4E-43 1.5E-47 341.4 27.1 378 4-454 1-401 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 1.2E-41 4E-46 331.6 33.2 379 3-452 20-412 (415)
11 3ia7_A CALG4; glycosysltransfe 100.0 3.8E-41 1.3E-45 326.7 34.7 377 1-452 2-397 (402)
12 3h4t_A Glycosyltransferase GTF 100.0 2.3E-42 7.8E-47 334.6 23.7 351 4-433 1-367 (404)
13 2yjn_A ERYCIII, glycosyltransf 100.0 1.1E-40 3.7E-45 327.0 30.3 369 3-452 20-433 (441)
14 2iyf_A OLED, oleandomycin glyc 100.0 6E-40 2.1E-44 321.0 32.0 364 2-433 6-383 (430)
15 2p6p_A Glycosyl transferase; X 100.0 2.1E-39 7.3E-44 312.3 34.1 349 4-449 1-375 (384)
16 4fzr_A SSFS6; structural genom 100.0 1.4E-37 4.9E-42 301.0 24.7 341 3-433 15-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 4.6E-37 1.6E-41 297.4 25.4 350 3-452 20-395 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 5E-36 1.7E-40 289.5 29.4 357 3-453 1-387 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 4.1E-33 1.4E-37 271.0 32.7 357 3-450 20-405 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 1.6E-28 5.6E-33 233.5 27.8 334 1-452 1-354 (365)
21 2o6l_A UDP-glucuronosyltransfe 100.0 1.3E-27 4.5E-32 202.3 15.3 163 254-432 6-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 9.5E-21 3.2E-25 180.6 25.4 338 1-453 2-355 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.7 6.6E-17 2.2E-21 145.8 17.8 116 268-396 156-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 8.9E-16 3E-20 132.6 7.9 132 266-414 25-196 (224)
25 3c48_A Predicted glycosyltrans 99.5 3.8E-11 1.3E-15 116.9 29.9 342 3-421 20-395 (438)
26 3okp_A GDP-mannose-dependent a 99.5 2.9E-11 9.8E-16 115.9 27.0 348 1-454 2-378 (394)
27 1v4v_A UDP-N-acetylglucosamine 99.4 2E-12 7E-17 123.3 15.7 135 269-425 198-342 (376)
28 3ot5_A UDP-N-acetylglucosamine 99.4 9.3E-12 3.2E-16 119.4 17.6 345 1-451 25-391 (403)
29 1vgv_A UDP-N-acetylglucosamine 99.4 1.2E-11 4.3E-16 118.2 18.1 134 268-422 204-347 (384)
30 3fro_A GLGA glycogen synthase; 99.4 1.6E-10 5.5E-15 112.4 25.7 355 2-419 1-398 (439)
31 3dzc_A UDP-N-acetylglucosamine 99.4 1.1E-11 3.6E-16 118.8 15.4 321 2-424 24-374 (396)
32 2iuy_A Avigt4, glycosyltransfe 99.3 1.9E-11 6.6E-16 114.9 15.9 151 272-454 164-337 (342)
33 2jjm_A Glycosyl transferase, g 99.3 2.2E-09 7.7E-14 102.8 30.7 319 3-422 15-355 (394)
34 3beo_A UDP-N-acetylglucosamine 99.3 6.3E-11 2.2E-15 112.8 18.5 323 2-423 7-348 (375)
35 2r60_A Glycosyl transferase, g 99.3 1.2E-09 4E-14 108.3 28.2 355 1-422 4-429 (499)
36 2gek_A Phosphatidylinositol ma 99.3 7E-10 2.4E-14 106.7 24.3 311 3-423 20-355 (406)
37 2iw1_A Lipopolysaccharide core 99.2 9E-09 3.1E-13 97.7 26.3 133 270-424 196-344 (374)
38 2x6q_A Trehalose-synthase TRET 99.1 3.5E-08 1.2E-12 95.2 26.5 83 326-422 292-384 (416)
39 4hwg_A UDP-N-acetylglucosamine 99.0 1.6E-09 5.4E-14 102.9 12.8 314 7-419 12-344 (385)
40 1rzu_A Glycogen synthase 1; gl 98.8 9.8E-07 3.4E-11 86.8 25.1 134 271-422 292-448 (485)
41 2vsy_A XCC0866; transferase, g 98.8 1.5E-05 5.1E-10 80.0 31.9 88 327-423 434-528 (568)
42 2qzs_A Glycogen synthase; glyc 98.8 5.8E-06 2E-10 81.3 28.1 133 271-423 293-450 (485)
43 3s28_A Sucrose synthase 1; gly 98.8 7.4E-07 2.5E-11 91.9 22.0 85 326-422 639-739 (816)
44 3oy2_A Glycosyltransferase B73 98.7 1.7E-06 5.7E-11 83.2 21.9 136 270-423 184-361 (413)
45 2f9f_A First mannosyl transfer 98.5 3E-07 1E-11 77.2 9.5 139 271-429 24-175 (177)
46 2hy7_A Glucuronosyltransferase 98.5 1.9E-05 6.4E-10 75.7 22.1 76 326-419 264-354 (406)
47 2xci_A KDO-transferase, 3-deox 98.5 3.8E-05 1.3E-09 72.6 23.8 92 328-430 261-362 (374)
48 3tov_A Glycosyl transferase fa 97.9 0.00032 1.1E-08 65.4 16.7 105 2-133 7-115 (349)
49 4gyw_A UDP-N-acetylglucosamine 97.9 0.00031 1.1E-08 72.1 16.1 141 269-424 522-675 (723)
50 3qhp_A Type 1 capsular polysac 97.8 0.00014 4.8E-09 59.8 11.1 129 270-422 2-145 (166)
51 3q3e_A HMW1C-like glycosyltran 97.8 0.00011 3.9E-09 72.3 11.9 140 270-424 441-595 (631)
52 2bfw_A GLGA glycogen synthase; 97.7 0.00075 2.6E-08 57.2 13.6 82 328-422 96-186 (200)
53 1psw_A ADP-heptose LPS heptosy 97.7 0.0037 1.3E-07 58.1 19.4 103 4-133 1-106 (348)
54 3rhz_A GTF3, nucleotide sugar 97.3 0.00032 1.1E-08 64.9 6.4 145 271-452 179-337 (339)
55 2gt1_A Lipopolysaccharide hept 97.1 0.052 1.8E-06 49.7 19.9 46 4-49 1-48 (326)
56 2x0d_A WSAF; GT4 family, trans 96.2 0.0046 1.6E-07 59.0 5.7 84 327-423 295-385 (413)
57 3vue_A GBSS-I, granule-bound s 94.1 0.41 1.4E-05 47.1 12.0 131 271-416 328-476 (536)
58 3q0i_A Methionyl-tRNA formyltr 90.9 2.8 9.6E-05 37.9 11.9 98 1-138 5-117 (318)
59 2bw0_A 10-FTHFDH, 10-formyltet 90.3 1.6 5.6E-05 39.7 9.9 103 1-138 20-131 (329)
60 3ty2_A 5'-nucleotidase SURE; s 90.3 0.67 2.3E-05 40.2 6.9 41 3-45 11-51 (261)
61 1ccw_A Protein (glutamate muta 90.2 0.56 1.9E-05 36.6 5.9 44 1-44 1-44 (137)
62 2phj_A 5'-nucleotidase SURE; S 89.8 1.8 6.1E-05 37.4 9.1 113 4-136 2-127 (251)
63 1uqt_A Alpha, alpha-trehalose- 89.6 1.8 6.1E-05 41.9 10.1 107 329-455 333-454 (482)
64 3t5t_A Putative glycosyltransf 89.4 1.3 4.5E-05 42.7 8.9 107 328-454 353-472 (496)
65 2ywr_A Phosphoribosylglycinami 89.0 4 0.00014 34.5 10.8 103 4-138 2-112 (216)
66 1g5t_A COB(I)alamin adenosyltr 88.8 3.9 0.00013 33.9 10.2 97 3-117 28-130 (196)
67 3qxc_A Dethiobiotin synthetase 87.1 2 6.7E-05 37.2 7.8 35 4-38 21-57 (242)
68 3nb0_A Glycogen [starch] synth 86.8 3.3 0.00011 41.4 10.0 46 327-374 490-551 (725)
69 2yxb_A Coenzyme B12-dependent 86.1 2.7 9.3E-05 33.7 7.7 109 3-133 18-126 (161)
70 4ds3_A Phosphoribosylglycinami 86.1 3.8 0.00013 34.4 8.7 106 1-138 5-118 (209)
71 3auf_A Glycinamide ribonucleot 86.0 9 0.00031 32.6 11.2 104 3-138 22-133 (229)
72 3av3_A Phosphoribosylglycinami 84.5 9.6 0.00033 32.0 10.6 103 4-138 4-114 (212)
73 1xmp_A PURE, phosphoribosylami 84.3 7.6 0.00026 31.0 9.1 145 269-437 11-165 (170)
74 1j9j_A Stationary phase surviV 83.7 5.8 0.0002 34.2 9.0 113 4-136 1-128 (247)
75 3zqu_A Probable aromatic acid 83.4 1.7 5.9E-05 36.5 5.4 48 1-49 1-49 (209)
76 3vue_A GBSS-I, granule-bound s 83.4 1 3.6E-05 44.2 4.8 39 3-41 9-53 (536)
77 3of5_A Dethiobiotin synthetase 83.0 5 0.00017 34.2 8.4 37 2-38 2-40 (228)
78 2q5c_A NTRC family transcripti 82.7 9.6 0.00033 31.6 9.8 43 91-139 129-171 (196)
79 2wqk_A 5'-nucleotidase SURE; S 82.7 3.5 0.00012 35.8 7.3 100 18-136 15-127 (251)
80 2x0d_A WSAF; GT4 family, trans 82.6 0.81 2.8E-05 43.3 3.6 39 3-41 46-89 (413)
81 3zzm_A Bifunctional purine bio 82.0 5.6 0.00019 37.9 8.8 104 3-124 9-118 (523)
82 3fgn_A Dethiobiotin synthetase 82.0 4.4 0.00015 35.2 7.7 122 3-138 25-167 (251)
83 3qjg_A Epidermin biosynthesis 81.3 1.9 6.5E-05 35.1 4.8 45 3-48 5-49 (175)
84 4dim_A Phosphoribosylglycinami 81.0 6.4 0.00022 36.8 9.2 36 1-41 5-40 (403)
85 1jkx_A GART;, phosphoribosylgl 80.3 15 0.00053 30.7 10.3 103 4-138 1-111 (212)
86 3tqr_A Phosphoribosylglycinami 80.0 8.6 0.0003 32.4 8.6 104 3-138 5-115 (215)
87 2e6c_A 5'-nucleotidase SURE; S 79.7 10 0.00036 32.5 9.1 111 4-136 1-129 (244)
88 1fmt_A Methionyl-tRNA FMet for 79.7 12 0.0004 33.7 10.0 97 2-138 2-113 (314)
89 4dzz_A Plasmid partitioning pr 79.2 14 0.00048 30.4 9.9 81 5-116 2-84 (206)
90 3rg8_A Phosphoribosylaminoimid 79.2 13 0.00045 29.4 8.7 138 270-434 3-149 (159)
91 1o4v_A Phosphoribosylaminoimid 78.6 17 0.00057 29.4 9.3 142 269-436 13-164 (183)
92 1l5x_A SurviVal protein E; str 78.4 6.7 0.00023 34.5 7.7 113 4-137 1-128 (280)
93 2v4n_A Multifunctional protein 78.3 11 0.00037 32.7 8.8 111 4-136 2-126 (254)
94 3iqw_A Tail-anchored protein t 78.0 17 0.0006 32.9 10.7 41 4-44 16-57 (334)
95 1id1_A Putative potassium chan 76.8 1.9 6.5E-05 34.1 3.5 35 1-40 1-35 (153)
96 1mvl_A PPC decarboxylase athal 76.8 3 0.0001 35.0 4.8 46 2-49 18-63 (209)
97 1meo_A Phosophoribosylglycinam 76.4 27 0.00094 29.1 10.7 103 4-138 1-111 (209)
98 3oow_A Phosphoribosylaminoimid 76.4 27 0.00093 27.7 10.5 144 270-438 6-160 (166)
99 3tqq_A Methionyl-tRNA formyltr 76.3 13 0.00045 33.4 9.2 105 3-138 2-112 (314)
100 3lqk_A Dipicolinate synthase s 76.0 2.7 9.2E-05 35.1 4.3 44 2-46 6-50 (201)
101 2iz6_A Molybdenum cofactor car 75.9 29 0.00099 28.1 10.3 75 331-415 93-172 (176)
102 2ejb_A Probable aromatic acid 75.6 5 0.00017 33.1 5.8 44 4-48 2-45 (189)
103 1u11_A PURE (N5-carboxyaminoim 75.5 15 0.00053 29.6 8.3 146 269-438 21-176 (182)
104 3bfv_A CAPA1, CAPB2, membrane 75.3 23 0.00078 30.9 10.5 39 3-41 81-121 (271)
105 1sbz_A Probable aromatic acid 74.8 3.9 0.00013 33.9 4.9 45 4-49 1-46 (197)
106 3ors_A N5-carboxyaminoimidazol 73.6 14 0.00048 29.3 7.5 142 270-435 4-155 (163)
107 3mcu_A Dipicolinate synthase, 73.2 3.9 0.00013 34.3 4.5 42 2-44 4-46 (207)
108 1p3y_1 MRSD protein; flavoprot 73.1 1.9 6.6E-05 35.7 2.6 46 3-49 8-53 (194)
109 3io3_A DEHA2D07832P; chaperone 73.0 14 0.00048 33.8 8.7 40 4-43 18-60 (348)
110 4grd_A N5-CAIR mutase, phospho 73.0 7.7 0.00026 31.0 5.9 144 268-435 11-164 (173)
111 1g63_A Epidermin modifying enz 72.6 3.1 0.00011 34.0 3.8 47 1-49 1-47 (181)
112 1y80_A Predicted cobalamin bin 72.0 7.3 0.00025 32.7 6.1 44 3-46 88-131 (210)
113 3gi1_A LBP, laminin-binding pr 72.0 19 0.00066 31.8 9.2 83 27-135 174-258 (286)
114 3da8_A Probable 5'-phosphoribo 71.9 10 0.00035 31.9 6.9 106 2-138 11-121 (215)
115 2bln_A Protein YFBG; transfera 71.5 18 0.00061 32.3 8.9 95 4-138 1-107 (305)
116 1qzu_A Hypothetical protein MD 71.4 3 0.0001 34.9 3.5 47 2-49 18-65 (206)
117 3lp6_A Phosphoribosylaminoimid 71.3 38 0.0013 27.1 10.6 141 270-435 8-157 (174)
118 3u7q_B Nitrogenase molybdenum- 71.3 35 0.0012 33.1 11.5 26 106-134 437-469 (523)
119 3kcq_A Phosphoribosylglycinami 71.2 16 0.00056 30.7 8.0 102 1-138 5-114 (215)
120 3ug7_A Arsenical pump-driving 70.7 51 0.0018 29.9 12.1 39 4-42 26-65 (349)
121 2vo1_A CTP synthase 1; pyrimid 70.7 4.6 0.00016 35.0 4.4 41 1-41 20-63 (295)
122 3kuu_A Phosphoribosylaminoimid 70.3 28 0.00096 27.9 8.6 145 270-438 13-167 (174)
123 3dfz_A SIRC, precorrin-2 dehyd 70.2 49 0.0017 27.9 11.6 149 262-434 26-186 (223)
124 2yvq_A Carbamoyl-phosphate syn 68.9 23 0.00079 27.4 8.0 97 7-134 27-131 (143)
125 3cio_A ETK, tyrosine-protein k 68.4 33 0.0011 30.5 10.0 38 4-41 104-143 (299)
126 3ghy_A Ketopantoate reductase 68.4 4.6 0.00016 36.8 4.4 44 1-49 1-44 (335)
127 3igf_A ALL4481 protein; two-do 68.3 9.6 0.00033 35.3 6.5 39 4-43 2-41 (374)
128 2i2x_B MTAC, methyltransferase 68.2 9.1 0.00031 33.3 6.1 39 3-41 123-161 (258)
129 1kjn_A MTH0777; hypotethical p 67.6 10 0.00035 29.4 5.3 47 3-49 6-54 (157)
130 3trh_A Phosphoribosylaminoimid 67.0 20 0.00069 28.6 7.1 142 269-434 6-157 (169)
131 1qgu_B Protein (nitrogenase mo 66.8 35 0.0012 33.1 10.4 26 106-134 433-465 (519)
132 4b4o_A Epimerase family protei 66.0 6 0.0002 35.1 4.6 33 4-40 1-33 (298)
133 1mio_A Nitrogenase molybdenum 65.8 23 0.00078 34.5 8.9 26 106-134 455-480 (533)
134 3la6_A Tyrosine-protein kinase 65.4 41 0.0014 29.6 9.9 38 4-41 92-131 (286)
135 3ezx_A MMCP 1, monomethylamine 64.8 13 0.00044 31.3 6.2 44 3-46 92-135 (215)
136 3rfo_A Methionyl-tRNA formyltr 64.6 37 0.0013 30.4 9.5 95 4-138 5-114 (317)
137 2o1e_A YCDH; alpha-beta protei 64.5 32 0.0011 30.8 9.1 85 26-136 184-270 (312)
138 4a1f_A DNAB helicase, replicat 64.2 7.7 0.00026 35.3 4.9 41 6-46 49-89 (338)
139 3pdi_B Nitrogenase MOFE cofact 64.0 20 0.00069 34.2 8.0 87 3-134 313-399 (458)
140 3dm5_A SRP54, signal recogniti 63.2 31 0.001 32.7 8.9 40 5-44 102-141 (443)
141 3o1l_A Formyltetrahydrofolate 62.7 58 0.002 28.9 10.2 104 3-138 105-213 (302)
142 3l7i_A Teichoic acid biosynthe 62.1 17 0.00057 37.1 7.6 112 333-453 605-719 (729)
143 1mio_B Nitrogenase molybdenum 61.6 38 0.0013 32.2 9.5 26 106-134 384-409 (458)
144 1hdo_A Biliverdin IX beta redu 61.6 10 0.00035 31.1 5.0 36 1-40 1-36 (206)
145 3n0v_A Formyltetrahydrofolate 61.5 54 0.0019 28.8 9.8 104 3-138 90-198 (286)
146 3vot_A L-amino acid ligase, BL 60.6 23 0.0008 33.2 7.9 36 1-41 1-38 (425)
147 3q9l_A Septum site-determining 60.3 37 0.0013 29.0 8.6 31 11-41 11-41 (260)
148 3lrx_A Putative hydrogenase; a 60.0 60 0.0021 25.4 11.8 35 4-41 24-58 (158)
149 3hn2_A 2-dehydropantoate 2-red 59.5 15 0.00053 32.8 6.1 40 4-49 3-42 (312)
150 3lou_A Formyltetrahydrofolate 59.3 86 0.0029 27.6 10.7 104 3-138 95-203 (292)
151 2r85_A PURP protein PF1517; AT 58.2 9.6 0.00033 34.4 4.5 35 2-42 1-35 (334)
152 3gpi_A NAD-dependent epimerase 58.0 12 0.0004 32.9 5.0 35 1-40 1-35 (286)
153 4fu0_A D-alanine--D-alanine li 57.7 5.7 0.0002 36.5 2.9 38 1-38 1-42 (357)
154 3i83_A 2-dehydropantoate 2-red 57.1 16 0.00056 32.8 5.9 40 4-49 3-42 (320)
155 4b4k_A N5-carboxyaminoimidazol 56.9 76 0.0026 25.5 12.0 145 269-437 22-176 (181)
156 3u7q_A Nitrogenase molybdenum- 56.6 53 0.0018 31.6 9.5 26 106-134 416-441 (492)
157 2vqe_B 30S ribosomal protein S 56.5 14 0.00049 31.8 4.9 33 106-138 157-191 (256)
158 3pdi_A Nitrogenase MOFE cofact 56.5 38 0.0013 32.5 8.6 27 106-135 400-426 (483)
159 3cx3_A Lipoprotein; zinc-bindi 56.4 30 0.001 30.4 7.4 83 27-135 172-256 (284)
160 3e8x_A Putative NAD-dependent 55.8 34 0.0012 28.8 7.5 37 2-42 20-56 (236)
161 2i2c_A Probable inorganic poly 54.8 6.6 0.00023 34.5 2.7 52 344-417 36-93 (272)
162 4gi5_A Quinone reductase; prot 54.6 21 0.0007 31.5 5.8 38 1-38 20-60 (280)
163 1ehi_A LMDDL2, D-alanine:D-lac 54.5 11 0.00038 34.8 4.4 40 1-40 1-45 (377)
164 4ehi_A Bifunctional purine bio 54.1 16 0.00054 35.0 5.1 96 15-125 32-133 (534)
165 1bg6_A N-(1-D-carboxylethyl)-L 53.8 8.9 0.0003 35.1 3.6 35 1-40 2-36 (359)
166 1pq4_A Periplasmic binding pro 53.5 66 0.0023 28.3 9.1 83 27-137 185-269 (291)
167 2pn1_A Carbamoylphosphate synt 52.6 17 0.00058 32.7 5.2 35 1-41 2-38 (331)
168 2xxa_A Signal recognition part 52.3 51 0.0017 31.1 8.5 39 5-43 102-141 (433)
169 1e4e_A Vancomycin/teicoplanin 52.0 9.7 0.00033 34.7 3.5 41 1-41 1-45 (343)
170 2h31_A Multifunctional protein 51.9 85 0.0029 29.3 9.6 140 268-434 264-412 (425)
171 2lpm_A Two-component response 51.7 8.9 0.00031 29.0 2.6 40 93-135 42-86 (123)
172 1yt5_A Inorganic polyphosphate 51.6 8.6 0.00029 33.5 2.9 53 343-417 41-96 (258)
173 3zq6_A Putative arsenical pump 51.4 30 0.001 31.1 6.7 38 5-42 15-53 (324)
174 2ew2_A 2-dehydropantoate 2-red 50.7 18 0.00061 32.2 5.0 35 1-40 1-35 (316)
175 3mc3_A DSRE/DSRF-like family p 50.3 24 0.00081 27.0 5.0 43 4-46 16-61 (134)
176 2i87_A D-alanine-D-alanine lig 50.3 8.1 0.00028 35.6 2.7 40 1-40 1-44 (364)
177 2r8r_A Sensor protein; KDPD, P 50.1 22 0.00074 30.2 5.0 39 3-41 6-44 (228)
178 3tov_A Glycosyl transferase fa 49.9 68 0.0023 29.0 8.9 100 4-137 186-289 (349)
179 3bgw_A DNAB-like replicative h 49.8 35 0.0012 32.3 7.0 41 6-46 200-240 (444)
180 1lss_A TRK system potassium up 49.7 14 0.00049 27.9 3.7 34 2-40 3-36 (140)
181 3ius_A Uncharacterized conserv 49.2 40 0.0014 29.2 7.1 34 4-42 6-39 (286)
182 3dhn_A NAD-dependent epimerase 48.8 16 0.00054 30.6 4.1 37 1-41 1-38 (227)
183 3qjg_A Epidermin biosynthesis 48.8 69 0.0024 25.8 7.6 115 269-392 6-143 (175)
184 4egb_A DTDP-glucose 4,6-dehydr 48.1 95 0.0033 27.7 9.6 31 4-38 25-57 (346)
185 3hwr_A 2-dehydropantoate 2-red 48.1 18 0.00062 32.5 4.6 42 3-49 19-60 (318)
186 3kkl_A Probable chaperone prot 48.0 34 0.0012 29.3 6.1 41 1-41 1-52 (244)
187 2ywx_A Phosphoribosylaminoimid 47.9 99 0.0034 24.3 9.2 134 272-434 2-144 (157)
188 1pjq_A CYSG, siroheme synthase 47.7 1.2E+02 0.0041 28.7 10.5 145 269-434 13-168 (457)
189 3gl9_A Response regulator; bet 47.3 28 0.00096 25.5 4.9 42 94-138 36-86 (122)
190 1e2b_A Enzyme IIB-cellobiose; 47.0 38 0.0013 24.6 5.4 39 1-39 1-39 (106)
191 3s2u_A UDP-N-acetylglucosamine 46.6 46 0.0016 30.4 7.2 26 343-370 92-120 (365)
192 1z7e_A Protein aRNA; rossmann 46.6 31 0.0011 34.6 6.5 33 106-138 74-107 (660)
193 3trh_A Phosphoribosylaminoimid 46.5 32 0.0011 27.4 5.0 42 1-43 4-47 (169)
194 1p9o_A Phosphopantothenoylcyst 45.7 17 0.00057 32.6 3.8 24 19-42 67-90 (313)
195 1eiw_A Hypothetical protein MT 45.5 31 0.0011 25.4 4.6 65 341-416 36-109 (111)
196 2lnd_A De novo designed protei 45.1 21 0.00072 24.0 3.2 47 364-415 50-99 (112)
197 2g1u_A Hypothetical protein TM 45.0 26 0.00088 27.3 4.6 34 3-41 19-52 (155)
198 1psw_A ADP-heptose LPS heptosy 44.9 1.7E+02 0.0057 26.0 11.4 103 4-136 181-288 (348)
199 2pju_A Propionate catabolism o 44.4 26 0.00088 29.7 4.6 40 91-136 141-180 (225)
200 2q5c_A NTRC family transcripti 44.3 18 0.00062 29.8 3.6 30 343-375 51-80 (196)
201 2pju_A Propionate catabolism o 44.3 22 0.00075 30.1 4.2 29 344-375 64-92 (225)
202 3to5_A CHEY homolog; alpha(5)b 44.0 25 0.00086 26.8 4.2 40 94-136 47-95 (134)
203 2x5n_A SPRPN10, 26S proteasome 43.9 49 0.0017 27.0 6.2 62 6-68 110-173 (192)
204 3dqz_A Alpha-hydroxynitrIle ly 43.5 16 0.00053 30.8 3.3 41 1-41 1-41 (258)
205 3i12_A D-alanine-D-alanine lig 43.4 15 0.00051 33.8 3.3 41 1-41 1-45 (364)
206 1p3y_1 MRSD protein; flavoprot 43.2 52 0.0018 27.0 6.2 139 270-417 10-186 (194)
207 3lqk_A Dipicolinate synthase s 43.1 1.4E+02 0.0047 24.6 10.2 145 269-417 8-186 (201)
208 3ouz_A Biotin carboxylase; str 42.7 49 0.0017 31.2 6.9 36 1-41 4-39 (446)
209 3obi_A Formyltetrahydrofolate 42.2 69 0.0023 28.2 7.2 104 3-138 89-198 (288)
210 2qs7_A Uncharacterized protein 42.2 30 0.001 26.8 4.4 44 5-48 9-53 (144)
211 1u7z_A Coenzyme A biosynthesis 42.1 24 0.00081 29.9 4.0 21 21-41 38-58 (226)
212 1iow_A DD-ligase, DDLB, D-ALA\ 41.9 35 0.0012 30.0 5.5 39 2-40 1-43 (306)
213 3nrb_A Formyltetrahydrofolate 41.3 90 0.0031 27.4 7.8 107 3-138 88-197 (287)
214 1pno_A NAD(P) transhydrogenase 40.9 29 0.00098 27.5 3.9 40 3-42 23-65 (180)
215 3ew7_A LMO0794 protein; Q8Y8U8 40.2 31 0.001 28.5 4.6 34 4-41 1-34 (221)
216 1d4o_A NADP(H) transhydrogenas 40.1 30 0.001 27.5 3.9 40 3-42 22-64 (184)
217 3bul_A Methionine synthase; tr 40.1 43 0.0015 32.9 6.0 44 3-46 98-141 (579)
218 2c5m_A CTP synthase; cytidine 39.9 20 0.0007 30.8 3.2 40 2-41 21-63 (294)
219 3e5n_A D-alanine-D-alanine lig 39.8 18 0.00062 33.5 3.3 41 1-41 20-64 (386)
220 3qvl_A Putative hydantoin race 39.7 60 0.002 27.8 6.3 37 4-40 2-39 (245)
221 3t6k_A Response regulator rece 39.3 43 0.0015 25.0 5.0 33 106-138 47-88 (136)
222 3fwz_A Inner membrane protein 39.2 33 0.0011 26.2 4.3 35 3-42 7-41 (140)
223 3llv_A Exopolyphosphatase-rela 38.6 19 0.00064 27.5 2.7 33 4-41 7-39 (141)
224 3eag_A UDP-N-acetylmuramate:L- 38.5 32 0.0011 31.0 4.6 34 3-40 4-37 (326)
225 1qkk_A DCTD, C4-dicarboxylate 38.5 85 0.0029 23.8 6.8 58 364-427 74-131 (155)
226 2prs_A High-affinity zinc upta 38.3 46 0.0016 29.2 5.6 74 32-134 174-252 (284)
227 3ksu_A 3-oxoacyl-acyl carrier 38.2 1.4E+02 0.0049 25.4 8.7 33 4-39 11-43 (262)
228 3ruf_A WBGU; rossmann fold, UD 38.0 28 0.00096 31.4 4.3 35 2-40 24-58 (351)
229 3f6p_A Transcriptional regulat 37.9 51 0.0017 23.8 5.1 43 94-139 36-84 (120)
230 2gk4_A Conserved hypothetical 37.5 25 0.00084 30.0 3.4 27 14-42 28-54 (232)
231 1qyd_A Pinoresinol-lariciresin 37.4 34 0.0011 30.2 4.6 36 1-40 1-37 (313)
232 3k96_A Glycerol-3-phosphate de 37.4 20 0.00069 32.8 3.1 34 3-41 29-62 (356)
233 4e5s_A MCCFLIKE protein (BA_56 37.3 38 0.0013 30.6 4.9 27 282-308 62-88 (331)
234 2fsv_C NAD(P) transhydrogenase 37.3 34 0.0012 27.8 3.9 40 3-42 46-88 (203)
235 2ixd_A LMBE-related protein; h 37.2 30 0.001 29.6 4.0 39 1-39 1-39 (242)
236 3pnx_A Putative sulfurtransfer 37.1 55 0.0019 25.9 5.2 48 1-48 2-50 (160)
237 2l82_A Designed protein OR32; 37.0 76 0.0026 22.8 5.3 34 271-308 3-36 (162)
238 3dfu_A Uncharacterized protein 36.9 24 0.00081 30.1 3.2 33 3-40 6-38 (232)
239 4dll_A 2-hydroxy-3-oxopropiona 36.5 42 0.0014 30.1 5.1 32 3-39 31-62 (320)
240 1djl_A Transhydrogenase DIII; 36.5 35 0.0012 27.8 3.9 40 3-42 45-87 (207)
241 3kjh_A CO dehydrogenase/acetyl 36.2 25 0.00086 29.8 3.5 39 4-42 1-39 (254)
242 2z1m_A GDP-D-mannose dehydrata 36.1 31 0.0011 30.9 4.2 36 1-40 1-36 (345)
243 1g8m_A Aicar transformylase-IM 36.1 69 0.0024 31.1 6.5 90 18-123 16-111 (593)
244 4g6h_A Rotenone-insensitive NA 35.8 17 0.0006 35.1 2.5 34 3-41 42-75 (502)
245 1jx7_A Hypothetical protein YC 35.7 35 0.0012 24.9 3.7 32 15-46 16-49 (117)
246 2hy5_A Putative sulfurtransfer 35.7 59 0.002 24.5 5.1 41 5-45 2-46 (130)
247 4gbj_A 6-phosphogluconate dehy 35.7 39 0.0013 29.9 4.7 30 4-38 6-35 (297)
248 1gsa_A Glutathione synthetase; 35.6 36 0.0012 30.0 4.5 37 4-40 2-41 (316)
249 1rw7_A YDR533CP; alpha-beta sa 35.5 74 0.0025 27.0 6.3 41 1-41 1-52 (243)
250 4e21_A 6-phosphogluconate dehy 35.4 26 0.00091 32.1 3.6 35 1-40 20-54 (358)
251 3f67_A Putative dienelactone h 35.0 48 0.0016 27.4 5.1 35 5-39 33-67 (241)
252 3rot_A ABC sugar transporter, 35.0 2.2E+02 0.0074 24.5 9.8 39 1-39 1-41 (297)
253 3sju_A Keto reductase; short-c 35.0 37 0.0013 29.6 4.4 37 1-40 21-57 (279)
254 3m6m_D Sensory/regulatory prot 34.9 40 0.0014 25.5 4.2 33 106-138 57-100 (143)
255 1dhr_A Dihydropteridine reduct 34.9 41 0.0014 28.4 4.6 35 3-40 6-40 (241)
256 3hh8_A Metal ABC transporter s 34.7 69 0.0024 28.3 6.1 74 33-132 184-259 (294)
257 1e6u_A GDP-fucose synthetase; 34.7 26 0.00088 31.2 3.4 35 1-39 1-35 (321)
258 3oid_A Enoyl-[acyl-carrier-pro 34.6 49 0.0017 28.4 5.1 36 1-39 1-36 (258)
259 3tfo_A Putative 3-oxoacyl-(acy 34.6 44 0.0015 28.9 4.8 37 1-40 1-37 (264)
260 2qyt_A 2-dehydropantoate 2-red 34.6 24 0.00082 31.4 3.1 41 3-48 8-54 (317)
261 2vrn_A Protease I, DR1199; cys 34.5 88 0.003 25.1 6.4 40 1-41 7-46 (190)
262 3bh0_A DNAB-like replicative h 34.0 85 0.0029 27.9 6.7 41 6-46 71-111 (315)
263 4huj_A Uncharacterized protein 34.0 17 0.00058 30.6 1.9 34 1-39 21-54 (220)
264 2j37_W Signal recognition part 33.8 1.3E+02 0.0044 28.9 8.2 39 5-43 103-141 (504)
265 4e3z_A Putative oxidoreductase 33.8 46 0.0016 28.7 4.8 36 1-39 23-58 (272)
266 1j8m_F SRP54, signal recogniti 33.6 1.7E+02 0.006 25.6 8.6 39 5-43 100-138 (297)
267 2bru_C NAD(P) transhydrogenase 33.3 34 0.0012 27.2 3.2 40 3-42 30-72 (186)
268 2qv7_A Diacylglycerol kinase D 32.8 35 0.0012 30.9 3.9 81 271-373 28-114 (337)
269 2zyd_A 6-phosphogluconate dehy 32.8 21 0.00073 34.2 2.6 35 1-40 13-47 (480)
270 2ehd_A Oxidoreductase, oxidore 32.8 33 0.0011 28.8 3.6 37 1-40 1-38 (234)
271 3enk_A UDP-glucose 4-epimerase 32.8 40 0.0014 30.2 4.4 36 1-39 2-37 (341)
272 3ego_A Probable 2-dehydropanto 32.4 45 0.0015 29.7 4.5 41 3-49 2-43 (307)
273 4e12_A Diketoreductase; oxidor 32.3 36 0.0012 29.9 3.8 35 1-40 2-36 (283)
274 2d1p_B TUSC, hypothetical UPF0 32.2 76 0.0026 23.4 5.1 43 1-44 1-45 (119)
275 3qha_A Putative oxidoreductase 32.0 30 0.001 30.6 3.3 33 3-40 15-47 (296)
276 1cyd_A Carbonyl reductase; sho 31.9 56 0.0019 27.5 5.0 32 6-40 9-40 (244)
277 3foj_A Uncharacterized protein 31.8 91 0.0031 21.9 5.4 32 4-39 57-88 (100)
278 2q6t_A DNAB replication FORK h 31.6 51 0.0017 31.1 5.0 41 6-46 203-244 (444)
279 1dbw_A Transcriptional regulat 31.6 80 0.0027 22.8 5.3 43 94-139 37-86 (126)
280 2bi7_A UDP-galactopyranose mut 31.6 33 0.0011 31.7 3.6 36 1-41 1-36 (384)
281 3lk7_A UDP-N-acetylmuramoylala 31.6 90 0.0031 29.5 6.7 32 3-39 9-40 (451)
282 3gk3_A Acetoacetyl-COA reducta 31.2 47 0.0016 28.6 4.4 35 3-40 24-58 (269)
283 4hb9_A Similarities with proba 30.9 33 0.0011 31.6 3.6 30 4-38 2-31 (412)
284 3gt7_A Sensor protein; structu 30.9 74 0.0025 24.2 5.2 42 94-138 41-91 (154)
285 2iz1_A 6-phosphogluconate dehy 30.7 27 0.00092 33.4 2.9 34 1-39 3-36 (474)
286 1zi8_A Carboxymethylenebutenol 30.6 65 0.0022 26.4 5.1 36 5-40 29-64 (236)
287 3i6i_A Putative leucoanthocyan 30.5 35 0.0012 30.7 3.6 37 1-41 8-44 (346)
288 3uhj_A Probable glycerol dehyd 30.3 1.3E+02 0.0045 27.7 7.4 93 22-138 43-140 (387)
289 1ks9_A KPA reductase;, 2-dehyd 30.1 39 0.0013 29.4 3.7 32 4-40 1-32 (291)
290 2fb6_A Conserved hypothetical 30.0 71 0.0024 23.6 4.5 42 3-44 7-52 (117)
291 3c3m_A Response regulator rece 30.0 72 0.0025 23.6 4.9 32 106-137 46-86 (138)
292 4fbl_A LIPS lipolytic enzyme; 30.0 36 0.0012 29.5 3.5 34 7-40 54-87 (281)
293 3mjf_A Phosphoribosylamine--gl 30.0 1.1E+02 0.0038 28.6 7.0 25 3-32 3-27 (431)
294 2nly_A BH1492 protein, diverge 29.9 2.6E+02 0.0089 23.8 9.6 37 92-133 116-155 (245)
295 1xrs_B D-lysine 5,6-aminomutas 29.8 41 0.0014 29.1 3.6 44 3-46 120-172 (262)
296 1toa_A Tromp-1, protein (perip 29.7 2.6E+02 0.0088 24.8 9.0 76 32-133 197-279 (313)
297 1z82_A Glycerol-3-phosphate de 29.5 37 0.0013 30.6 3.5 33 3-40 14-46 (335)
298 3s40_A Diacylglycerol kinase; 29.4 91 0.0031 27.6 6.0 80 271-373 12-97 (304)
299 1zl0_A Hypothetical protein PA 29.4 74 0.0025 28.4 5.3 74 281-373 63-138 (311)
300 2d1p_A TUSD, hypothetical UPF0 29.3 1E+02 0.0035 23.6 5.5 41 3-43 12-56 (140)
301 1xgk_A Nitrogen metabolite rep 29.0 50 0.0017 30.0 4.3 36 3-42 5-40 (352)
302 3md9_A Hemin-binding periplasm 29.0 56 0.0019 27.8 4.5 30 106-135 58-89 (255)
303 3dtt_A NADP oxidoreductase; st 29.0 44 0.0015 28.5 3.7 33 3-40 19-51 (245)
304 1u0t_A Inorganic polyphosphate 28.9 18 0.00062 32.3 1.3 32 340-373 72-107 (307)
305 2an1_A Putative kinase; struct 28.9 21 0.00073 31.5 1.7 30 342-373 62-95 (292)
306 2rjn_A Response regulator rece 28.9 90 0.0031 23.6 5.4 43 93-138 40-89 (154)
307 3eme_A Rhodanese-like domain p 28.9 89 0.003 22.0 4.9 32 4-39 57-88 (103)
308 3l77_A Short-chain alcohol deh 28.8 61 0.0021 27.1 4.6 34 4-40 2-35 (235)
309 4hn9_A Iron complex transport 28.7 45 0.0015 30.0 3.9 31 106-136 115-145 (335)
310 3osu_A 3-oxoacyl-[acyl-carrier 28.7 74 0.0025 26.9 5.2 36 1-39 1-36 (246)
311 3gg2_A Sugar dehydrogenase, UD 28.6 39 0.0013 32.1 3.6 33 4-41 3-35 (450)
312 4h1h_A LMO1638 protein; MCCF-l 28.5 58 0.002 29.3 4.5 27 282-308 62-88 (327)
313 1o97_C Electron transferring f 28.4 60 0.002 28.2 4.5 32 106-137 111-148 (264)
314 3lyu_A Putative hydrogenase; t 28.4 37 0.0013 26.1 2.8 36 4-42 19-54 (142)
315 3n7t_A Macrophage binding prot 28.3 1.1E+02 0.0038 26.1 6.2 38 4-41 10-58 (247)
316 3cky_A 2-hydroxymethyl glutara 28.3 62 0.0021 28.4 4.8 34 1-39 1-35 (301)
317 2w36_A Endonuclease V; hypoxan 28.2 93 0.0032 26.2 5.4 30 106-135 102-138 (225)
318 3o26_A Salutaridine reductase; 28.2 60 0.0021 28.4 4.7 36 3-41 11-46 (311)
319 3k3p_A D-alanine--D-alanine li 28.1 35 0.0012 31.5 3.1 41 1-41 35-79 (383)
320 2qx0_A 7,8-dihydro-6-hydroxyme 28.1 94 0.0032 24.5 5.1 28 271-298 3-30 (159)
321 3afo_A NADH kinase POS5; alpha 28.1 25 0.00085 32.6 2.0 58 338-417 109-171 (388)
322 4ao6_A Esterase; hydrolase, th 28.0 52 0.0018 28.1 4.1 39 4-42 56-96 (259)
323 2etv_A Iron(III) ABC transport 28.0 40 0.0014 30.6 3.4 37 92-135 88-125 (346)
324 2rcy_A Pyrroline carboxylate r 27.9 22 0.00074 30.7 1.6 34 1-39 2-39 (262)
325 3lyl_A 3-oxoacyl-(acyl-carrier 27.9 66 0.0023 27.1 4.7 36 3-41 4-39 (247)
326 2gdz_A NAD+-dependent 15-hydro 27.8 78 0.0027 27.1 5.3 33 5-40 8-40 (267)
327 3h2s_A Putative NADH-flavin re 27.8 46 0.0016 27.5 3.7 28 12-41 7-34 (224)
328 1kyq_A Met8P, siroheme biosynt 27.8 3E+02 0.01 23.9 9.6 86 343-435 106-211 (274)
329 3dkr_A Esterase D; alpha beta 27.7 62 0.0021 26.6 4.5 37 4-40 22-58 (251)
330 2vpq_A Acetyl-COA carboxylase; 27.7 1.5E+02 0.005 27.9 7.5 32 5-41 3-34 (451)
331 2xw6_A MGS, methylglyoxal synt 27.6 1.3E+02 0.0043 23.0 5.6 88 16-137 14-114 (134)
332 2wtm_A EST1E; hydrolase; 1.60A 27.6 76 0.0026 26.5 5.1 37 5-41 28-66 (251)
333 3icc_A Putative 3-oxoacyl-(acy 27.6 1.1E+02 0.0038 25.8 6.2 36 3-41 6-41 (255)
334 1evy_A Glycerol-3-phosphate de 27.6 27 0.00091 32.0 2.2 33 3-40 14-47 (366)
335 2rk3_A Protein DJ-1; parkinson 27.6 1.2E+02 0.0042 24.5 6.2 40 1-41 1-40 (197)
336 2bon_A Lipid kinase; DAG kinas 27.5 64 0.0022 29.0 4.7 81 268-373 30-118 (332)
337 3sr3_A Microcin immunity prote 27.4 60 0.0021 29.3 4.5 72 283-373 64-137 (336)
338 3tl4_X Glutaminyl-tRNA synthet 27.3 60 0.0021 26.4 3.9 57 388-453 111-178 (187)
339 4e7p_A Response regulator; DNA 27.2 96 0.0033 23.3 5.2 44 92-138 54-104 (150)
340 1sby_A Alcohol dehydrogenase; 27.2 1.1E+02 0.0036 26.0 5.9 34 5-41 6-40 (254)
341 3vps_A TUNA, NAD-dependent epi 27.1 56 0.0019 28.7 4.3 34 3-40 7-40 (321)
342 1xvl_A Mn transporter, MNTC pr 27.1 2.1E+02 0.0073 25.4 8.0 76 32-133 204-281 (321)
343 3nhm_A Response regulator; pro 27.0 1E+02 0.0035 22.4 5.2 32 106-137 46-86 (133)
344 2pzm_A Putative nucleotide sug 27.0 56 0.0019 29.1 4.3 33 3-39 20-52 (330)
345 1f9y_A HPPK, protein (6-hydrox 26.9 76 0.0026 25.0 4.4 28 271-298 2-29 (158)
346 1ooe_A Dihydropteridine reduct 26.8 52 0.0018 27.6 3.8 36 1-40 1-36 (236)
347 2q8p_A Iron-regulated surface 26.8 47 0.0016 28.4 3.6 31 106-136 59-90 (260)
348 3euw_A MYO-inositol dehydrogen 26.6 3.1E+02 0.011 24.3 9.3 108 271-395 7-122 (344)
349 3pfb_A Cinnamoyl esterase; alp 26.4 83 0.0028 26.4 5.2 37 5-41 47-85 (270)
350 4h15_A Short chain alcohol deh 26.4 76 0.0026 27.4 4.8 34 3-39 10-43 (261)
351 1jf8_A Arsenate reductase; ptp 26.4 77 0.0026 23.9 4.3 28 1-28 1-28 (131)
352 2hmt_A YUAA protein; RCK, KTN, 26.3 38 0.0013 25.5 2.6 32 4-40 7-38 (144)
353 2raf_A Putative dinucleotide-b 26.3 54 0.0018 27.1 3.7 32 3-39 19-50 (209)
354 2xj4_A MIPZ; replication, cell 26.3 71 0.0024 27.8 4.7 41 1-41 1-43 (286)
355 3g0o_A 3-hydroxyisobutyrate de 26.2 37 0.0013 30.1 2.8 32 3-39 7-38 (303)
356 1ulz_A Pyruvate carboxylase N- 26.2 2.2E+02 0.0075 26.6 8.5 32 5-41 4-35 (451)
357 2qxy_A Response regulator; reg 26.1 1E+02 0.0034 22.8 5.1 42 93-138 37-85 (142)
358 3psh_A Protein HI_1472; substr 26.1 59 0.002 29.0 4.2 31 106-136 83-114 (326)
359 1efv_B Electron transfer flavo 26.1 71 0.0024 27.5 4.5 32 106-137 115-152 (255)
360 1jzt_A Hypothetical 27.5 kDa p 26.1 51 0.0018 28.2 3.6 33 4-39 59-93 (246)
361 3eod_A Protein HNR; response r 26.1 89 0.003 22.7 4.7 43 94-139 41-90 (130)
362 1b93_A Protein (methylglyoxal 26.1 1.6E+02 0.0054 23.0 6.0 88 15-136 21-121 (152)
363 1efp_B ETF, protein (electron 26.0 69 0.0024 27.5 4.4 32 106-137 112-149 (252)
364 1wma_A Carbonyl reductase [NAD 26.0 79 0.0027 27.0 4.9 37 1-40 1-38 (276)
365 3mfq_A TROA, high-affinity zin 25.9 2.1E+02 0.0071 24.9 7.6 79 32-136 163-246 (282)
366 4e5v_A Putative THUA-like prot 25.9 79 0.0027 27.7 4.8 38 2-40 3-43 (281)
367 1imj_A CIB, CCG1-interacting f 25.9 1.3E+02 0.0046 23.8 6.2 39 4-42 32-72 (210)
368 4eg0_A D-alanine--D-alanine li 25.8 1.1E+02 0.0036 27.2 5.9 39 3-41 13-55 (317)
369 2w84_A Peroxisomal membrane pr 25.8 73 0.0025 21.1 3.3 49 402-453 12-60 (70)
370 3d3j_A Enhancer of mRNA-decapp 25.8 55 0.0019 29.2 3.8 33 4-39 133-167 (306)
371 1qv9_A F420-dependent methylen 25.7 84 0.0029 26.6 4.5 34 106-139 63-102 (283)
372 2zts_A Putative uncharacterize 25.7 2.8E+02 0.0096 22.8 10.2 43 5-47 32-75 (251)
373 3nrc_A Enoyl-[acyl-carrier-pro 25.7 95 0.0032 26.9 5.4 36 4-41 26-62 (280)
374 2r7a_A Bacterial heme binding 25.6 70 0.0024 27.2 4.5 30 106-135 58-89 (256)
375 3goc_A Endonuclease V; alpha-b 25.6 1.1E+02 0.0039 25.8 5.4 29 106-134 106-141 (237)
376 1tmy_A CHEY protein, TMY; chem 25.6 86 0.0029 22.3 4.5 34 106-139 46-86 (120)
377 4f0j_A Probable hydrolytic enz 25.4 68 0.0023 27.5 4.5 37 5-41 47-83 (315)
378 3ip0_A 2-amino-4-hydroxy-6-hyd 25.4 84 0.0029 24.8 4.4 28 271-298 2-29 (158)
379 3a10_A Response regulator; pho 25.3 1.2E+02 0.004 21.4 5.2 32 106-137 44-82 (116)
380 3bzy_A ESCU; auto cleavage pro 24.9 1.3E+02 0.0045 18.7 4.5 34 400-433 5-38 (54)
381 3c85_A Putative glutathione-re 24.8 40 0.0014 27.0 2.6 34 3-41 39-73 (183)
382 2rir_A Dipicolinate synthase, 24.7 89 0.003 27.5 5.1 33 1-38 5-37 (300)
383 3pe6_A Monoglyceride lipase; a 24.7 74 0.0025 27.0 4.6 38 4-41 42-79 (303)
384 3d3k_A Enhancer of mRNA-decapp 24.7 59 0.002 28.1 3.7 33 4-39 86-120 (259)
385 1y1p_A ARII, aldehyde reductas 24.7 74 0.0025 28.2 4.7 34 3-40 11-44 (342)
386 1zgz_A Torcad operon transcrip 24.7 1E+02 0.0035 22.0 4.8 33 106-138 45-83 (122)
387 3hv2_A Response regulator/HD d 24.6 98 0.0034 23.4 4.8 43 93-138 47-96 (153)
388 3c01_A Surface presentation of 24.6 1.2E+02 0.0042 18.3 4.4 32 402-433 1-32 (48)
389 2zki_A 199AA long hypothetical 24.5 72 0.0025 25.8 4.2 39 1-40 1-41 (199)
390 3dqp_A Oxidoreductase YLBE; al 24.4 63 0.0021 26.6 3.8 33 5-41 2-34 (219)
391 3nva_A CTP synthase; rossman f 24.3 79 0.0027 30.5 4.7 40 3-42 2-44 (535)
392 2b69_A UDP-glucuronate decarbo 24.3 70 0.0024 28.6 4.4 33 3-39 27-59 (343)
393 3l6e_A Oxidoreductase, short-c 24.2 78 0.0027 26.6 4.4 36 1-40 1-36 (235)
394 3i4f_A 3-oxoacyl-[acyl-carrier 24.2 77 0.0026 27.0 4.5 35 3-40 6-40 (264)
395 3h7a_A Short chain dehydrogena 24.2 85 0.0029 26.7 4.7 35 3-40 6-40 (252)
396 2jk1_A HUPR, hydrogenase trans 24.2 2E+02 0.0067 21.0 6.5 50 364-418 71-120 (139)
397 3i42_A Response regulator rece 24.2 99 0.0034 22.3 4.6 40 95-137 38-86 (127)
398 2r6a_A DNAB helicase, replicat 24.1 2.6E+02 0.0088 26.3 8.5 41 5-45 205-246 (454)
399 3sty_A Methylketone synthase 1 24.1 77 0.0026 26.4 4.5 37 5-41 13-49 (267)
400 1cbk_A Protein (7,8-dihydro-6- 24.1 92 0.0031 24.6 4.4 28 271-298 3-30 (160)
401 3obb_A Probable 3-hydroxyisobu 24.1 80 0.0027 27.9 4.6 30 5-39 5-34 (300)
402 1qyc_A Phenylcoumaran benzylic 24.0 67 0.0023 28.1 4.1 36 1-40 1-37 (308)
403 3qbc_A 2-amino-4-hydroxy-6-hyd 24.0 1.2E+02 0.0042 23.9 5.0 29 270-298 5-33 (161)
404 2dpo_A L-gulonate 3-dehydrogen 23.9 49 0.0017 29.7 3.2 33 3-40 6-38 (319)
405 3doj_A AT3G25530, dehydrogenas 23.9 73 0.0025 28.3 4.3 33 3-40 21-53 (310)
406 3l4b_C TRKA K+ channel protien 23.9 29 0.00099 28.9 1.6 33 4-41 1-33 (218)
407 2fx5_A Lipase; alpha-beta hydr 23.9 63 0.0022 27.3 3.8 37 4-40 49-85 (258)
408 1rkx_A CDP-glucose-4,6-dehydra 23.8 61 0.0021 29.2 3.9 35 2-40 8-42 (357)
409 1req_A Methylmalonyl-COA mutas 23.7 2.1E+02 0.0071 28.9 7.8 110 3-134 596-705 (727)
410 2o8n_A APOA-I binding protein; 23.7 66 0.0023 27.9 3.8 33 4-39 80-114 (265)
411 1xhf_A DYE resistance, aerobic 23.6 1.2E+02 0.0041 21.6 5.0 33 106-138 46-84 (123)
412 3pef_A 6-phosphogluconate dehy 23.5 69 0.0024 27.9 4.1 32 4-40 2-33 (287)
413 3i7m_A XAA-Pro dipeptidase; st 23.5 46 0.0016 25.3 2.6 34 15-48 1-34 (140)
414 3ujp_A Mn transporter subunit; 23.5 2.3E+02 0.0079 25.1 7.5 76 32-133 190-267 (307)
415 4gkb_A 3-oxoacyl-[acyl-carrier 23.4 88 0.003 26.9 4.6 36 3-41 6-41 (258)
416 3tpc_A Short chain alcohol deh 23.3 81 0.0028 26.8 4.4 35 3-40 6-40 (257)
417 2izz_A Pyrroline-5-carboxylate 23.3 59 0.002 29.1 3.6 36 1-41 20-59 (322)
418 2qzj_A Two-component response 23.2 1E+02 0.0034 22.8 4.5 33 106-138 47-85 (136)
419 3ff5_A PEX14P, peroxisomal bio 23.1 75 0.0026 19.8 2.9 45 403-450 8-52 (54)
420 4iin_A 3-ketoacyl-acyl carrier 23.1 1E+02 0.0035 26.5 5.1 33 4-39 29-61 (271)
421 3cu5_A Two component transcrip 23.0 1.1E+02 0.0038 22.7 4.8 41 94-137 39-86 (141)
422 1txg_A Glycerol-3-phosphate de 23.0 63 0.0022 28.8 3.8 31 4-39 1-31 (335)
423 1uls_A Putative 3-oxoacyl-acyl 23.0 99 0.0034 26.1 4.9 33 5-40 6-38 (245)
424 1r8j_A KAIA; circadian clock p 23.0 2.9E+02 0.01 23.8 7.4 70 375-453 156-229 (289)
425 3n74_A 3-ketoacyl-(acyl-carrie 22.9 87 0.003 26.6 4.6 34 4-40 9-42 (261)
426 3qit_A CURM TE, polyketide syn 22.8 83 0.0028 26.3 4.5 37 5-41 27-63 (286)
427 1srr_A SPO0F, sporulation resp 22.8 91 0.0031 22.4 4.1 33 106-138 46-85 (124)
428 3r5x_A D-alanine--D-alanine li 22.8 49 0.0017 29.2 3.0 46 2-47 2-51 (307)
429 3sxp_A ADP-L-glycero-D-mannohe 22.7 95 0.0033 28.0 5.0 35 3-41 10-46 (362)
430 4g65_A TRK system potassium up 22.7 24 0.00083 33.6 0.9 35 2-41 2-36 (461)
431 3e9m_A Oxidoreductase, GFO/IDH 22.6 2.4E+02 0.0083 25.0 7.7 109 271-395 8-124 (330)
432 3ged_A Short-chain dehydrogena 22.6 86 0.0029 26.8 4.3 35 1-40 1-35 (247)
433 3m1a_A Putative dehydrogenase; 22.6 96 0.0033 26.7 4.8 36 3-41 4-39 (281)
434 2hq1_A Glucose/ribitol dehydro 22.6 89 0.0031 26.2 4.6 31 5-38 6-36 (247)
435 3sc4_A Short chain dehydrogena 22.6 92 0.0031 27.1 4.7 36 3-41 8-43 (285)
436 3rkr_A Short chain oxidoreduct 22.5 1E+02 0.0035 26.3 5.0 33 5-40 30-62 (262)
437 1x1t_A D(-)-3-hydroxybutyrate 22.5 1E+02 0.0035 26.3 4.9 35 3-40 3-37 (260)
438 3zv4_A CIS-2,3-dihydrobiphenyl 22.4 1E+02 0.0034 26.7 4.9 35 3-40 4-38 (281)
439 2ag5_A DHRS6, dehydrogenase/re 22.4 98 0.0034 26.1 4.8 32 5-39 7-38 (246)
440 3g79_A NDP-N-acetyl-D-galactos 22.4 94 0.0032 29.7 4.9 35 3-42 18-54 (478)
441 1vmd_A MGS, methylglyoxal synt 22.4 1.6E+02 0.0054 23.7 5.4 88 16-137 38-138 (178)
442 3gem_A Short chain dehydrogena 22.3 71 0.0024 27.4 3.8 34 5-41 28-61 (260)
443 1fjh_A 3alpha-hydroxysteroid d 22.3 1E+02 0.0036 26.0 5.0 32 5-39 2-33 (257)
444 3rqi_A Response regulator prot 22.2 88 0.003 24.8 4.2 43 93-138 40-89 (184)
445 1vpd_A Tartronate semialdehyde 22.2 89 0.003 27.3 4.6 31 4-39 6-36 (299)
446 3rm3_A MGLP, thermostable mono 22.1 76 0.0026 26.6 4.1 37 5-41 41-77 (270)
447 3ia7_A CALG4; glycosysltransfe 22.1 1.1E+02 0.0036 27.9 5.3 35 270-306 6-40 (402)
448 2a9o_A Response regulator; ess 22.1 1.1E+02 0.0036 21.7 4.4 33 106-138 44-82 (120)
449 3guy_A Short-chain dehydrogena 22.0 71 0.0024 26.6 3.7 34 4-40 1-34 (230)
450 3q2i_A Dehydrogenase; rossmann 22.0 2.8E+02 0.0097 24.8 8.1 109 270-395 15-132 (354)
451 1g63_A Epidermin modifying enz 22.0 3.1E+02 0.011 22.0 9.0 135 271-415 5-176 (181)
452 2fuk_A XC6422 protein; A/B hyd 22.0 1.4E+02 0.0047 24.0 5.6 37 4-40 37-78 (220)
453 3alj_A 2-methyl-3-hydroxypyrid 21.9 62 0.0021 29.5 3.6 34 1-39 9-42 (379)
454 2nwq_A Probable short-chain de 21.8 88 0.003 27.0 4.4 33 5-40 22-54 (272)
455 3sbx_A Putative uncharacterize 21.8 1.5E+02 0.0053 24.0 5.5 37 3-40 13-53 (189)
456 3slg_A PBGP3 protein; structur 21.7 69 0.0024 29.0 3.8 36 2-41 23-59 (372)
457 1byi_A Dethiobiotin synthase; 21.5 91 0.0031 25.7 4.3 33 6-38 4-37 (224)
458 1u0t_A Inorganic polyphosphate 21.5 86 0.003 27.8 4.3 39 1-39 1-41 (307)
459 1h5q_A NADP-dependent mannitol 21.4 77 0.0026 26.9 3.9 32 5-39 15-46 (265)
460 1f0y_A HCDH, L-3-hydroxyacyl-C 21.4 57 0.002 28.8 3.1 32 4-40 16-47 (302)
461 3s55_A Putative short-chain de 21.3 1E+02 0.0036 26.5 4.8 34 4-40 10-43 (281)
462 3un1_A Probable oxidoreductase 21.3 95 0.0033 26.5 4.5 34 4-40 28-61 (260)
463 1jl3_A Arsenate reductase; alp 21.3 96 0.0033 23.6 4.0 28 1-28 1-28 (139)
464 3cz5_A Two-component response 21.3 1.6E+02 0.0054 22.1 5.4 42 94-138 41-89 (153)
465 3giu_A Pyrrolidone-carboxylate 21.3 75 0.0026 26.6 3.5 29 1-29 1-31 (215)
466 2hun_A 336AA long hypothetical 21.3 70 0.0024 28.4 3.7 35 1-39 1-37 (336)
467 3vis_A Esterase; alpha/beta-hy 21.2 1.1E+02 0.0036 26.8 4.9 35 5-39 97-131 (306)
468 3hbl_A Pyruvate carboxylase; T 21.2 3.2E+02 0.011 29.4 9.2 37 1-42 1-38 (1150)
469 1jbe_A Chemotaxis protein CHEY 21.2 1.4E+02 0.0049 21.3 5.0 42 94-138 39-89 (128)
470 1ff9_A Saccharopine reductase; 21.2 79 0.0027 29.9 4.1 35 1-40 1-35 (450)
471 1xq6_A Unknown protein; struct 21.1 1.1E+02 0.0039 25.4 5.0 36 1-40 2-39 (253)
472 4dqx_A Probable oxidoreductase 21.1 1.1E+02 0.0038 26.4 4.9 34 4-40 27-60 (277)
473 2pl1_A Transcriptional regulat 21.1 1.5E+02 0.0052 20.9 5.1 33 106-138 43-82 (121)
474 4fgs_A Probable dehydrogenase 21.1 93 0.0032 27.1 4.3 33 4-39 29-61 (273)
475 1p6q_A CHEY2; chemotaxis, sign 21.1 1.2E+02 0.0042 21.8 4.6 41 94-137 41-90 (129)
476 4gwg_A 6-phosphogluconate dehy 21.0 57 0.002 31.2 3.1 35 1-40 2-36 (484)
477 1ydn_A Hydroxymethylglutaryl-C 21.0 4.1E+02 0.014 23.0 8.9 25 282-306 23-47 (295)
478 2bka_A CC3, TAT-interacting pr 21.0 65 0.0022 27.0 3.3 34 3-40 18-53 (242)
479 1x0v_A GPD-C, GPDH-C, glycerol 20.9 29 0.001 31.5 1.1 36 1-41 6-48 (354)
480 1yo6_A Putative carbonyl reduc 20.9 98 0.0034 25.8 4.5 36 1-40 1-38 (250)
481 3nyw_A Putative oxidoreductase 20.9 73 0.0025 27.1 3.6 34 4-40 7-40 (250)
482 3kkj_A Amine oxidase, flavin-c 20.9 52 0.0018 27.7 2.7 19 21-39 15-33 (336)
483 1q57_A DNA primase/helicase; d 20.9 3.8E+02 0.013 25.4 9.1 41 6-46 245-286 (503)
484 1jay_A Coenzyme F420H2:NADP+ o 20.9 73 0.0025 26.1 3.5 33 4-40 1-33 (212)
485 3ppi_A 3-hydroxyacyl-COA dehyd 20.8 1.2E+02 0.0041 26.1 5.1 34 4-40 30-63 (281)
486 3bch_A 40S ribosomal protein S 20.8 93 0.0032 26.7 4.0 33 106-138 150-184 (253)
487 2qjw_A Uncharacterized protein 20.8 1.3E+02 0.0046 23.0 5.0 38 1-39 2-41 (176)
488 2uyy_A N-PAC protein; long-cha 20.8 73 0.0025 28.2 3.7 33 3-40 30-62 (316)
489 2o6l_A UDP-glucuronosyltransfe 20.8 1.4E+02 0.0048 23.1 5.1 38 4-41 21-61 (170)
490 3awd_A GOX2181, putative polyo 20.7 1.1E+02 0.0036 26.0 4.7 33 5-40 14-46 (260)
491 3hh1_A Tetrapyrrole methylase 20.7 75 0.0026 23.3 3.2 13 26-38 74-86 (117)
492 3g5j_A Putative ATP/GTP bindin 20.7 1.3E+02 0.0043 22.3 4.6 32 4-39 90-122 (134)
493 1g3q_A MIND ATPase, cell divis 20.6 82 0.0028 26.2 3.9 36 6-41 5-41 (237)
494 1tht_A Thioesterase; 2.10A {Vi 20.6 77 0.0026 27.9 3.8 37 5-41 36-72 (305)
495 3kcn_A Adenylate cyclase homol 20.5 2.1E+02 0.0071 21.3 6.0 51 364-420 75-126 (151)
496 4eso_A Putative oxidoreductase 20.5 1.1E+02 0.0039 25.9 4.8 34 4-40 8-41 (255)
497 1qsg_A Enoyl-[acyl-carrier-pro 20.4 1.4E+02 0.0048 25.4 5.4 34 5-40 10-44 (265)
498 3kp1_A D-ornithine aminomutase 20.4 1.1E+02 0.0039 30.2 4.9 109 3-133 602-716 (763)
499 2woo_A ATPase GET3; tail-ancho 20.3 1.1E+02 0.0037 27.4 4.7 39 4-42 19-58 (329)
500 2vns_A Metalloreductase steap3 20.3 62 0.0021 26.9 2.9 31 4-39 29-59 (215)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=9.5e-71 Score=532.14 Aligned_cols=431 Identities=25% Similarity=0.457 Sum_probs=352.7
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCC--CeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCC-CcchHH
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHG--LRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWD-DRSDMR 79 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~G--h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 79 (457)
+.||+++|+|++||++|++.||+.|+++| +.|||++++.+...+.+.. ....++++|+.+|+++++.. ...+..
T Consensus 13 ~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~---~~~~~~i~~~~ipdglp~~~~~~~~~~ 89 (454)
T 3hbf_A 13 LLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRS---NEFLPNIKYYNVHDGLPKGYVSSGNPR 89 (454)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSS---SCCCTTEEEEECCCCCCTTCCCCSCTT
T ss_pred CCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhccc---ccCCCCceEEecCCCCCCCccccCChH
Confidence 67999999999999999999999999999 9999999977665553321 01135799999999988763 222333
Q ss_pred HHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHcCCceEEEechhhHHHHHHhhhhhhhhccCCCC
Q 012744 80 KLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAGWAIEVAEKMKLRRAVVVITSAATVALTFSIPKLIEDGVINS 159 (457)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~ 159 (457)
..+..+.+.+...+++.++.+..+.+.++||||+|.+..|+..+|+++|||++.+++++++.+..+.+++.+.......
T Consensus 90 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~~- 168 (454)
T 3hbf_A 90 EPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSK- 168 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTCCHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhcCCC-
Confidence 3344444444455666665543221268999999999999999999999999999999999998888877655431100
Q ss_pred CCCCccccccccCCCCCCCccccccccccCCcchhhHHHHHHHHHHHhhhcCcEEEEcCcccccchh----hccCCceee
Q 012744 160 NGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNMRATRAADFQLCNSTYELEGGA----FSMIPELLP 235 (457)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~----~~~~~~~~~ 235 (457)
.......+..+|+++.+..++++ .++.. .....+..++.+..+...+++.+++||+++||++. ++..|++++
T Consensus 169 --~~~~~~~~~~iPg~p~~~~~dlp-~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~~~v~~ 244 (454)
T 3hbf_A 169 --EVHDVKSIDVLPGFPELKASDLP-EGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKFKLLLN 244 (454)
T ss_dssp --HHTTSSCBCCSTTSCCBCGGGSC-TTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTSSCEEE
T ss_pred --ccccccccccCCCCCCcChhhCc-hhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcCCCEEE
Confidence 00112334468999999999998 44432 33345667777777888999999999999999863 455689999
Q ss_pred eCcccCCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcC
Q 012744 236 IGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDAND 315 (457)
Q Consensus 236 vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~ 315 (457)
|||++...... .++.+.++.+||+.++++++|||+|||+...+.+++.+++.+++..+++|||+++.. ...
T Consensus 245 vGPl~~~~~~~-----~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~----~~~ 315 (454)
T 3hbf_A 245 VGPFNLTTPQR-----KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGD----PKE 315 (454)
T ss_dssp CCCHHHHSCCS-----CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSC----HHH
T ss_pred ECCcccccccc-----cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCc----chh
Confidence 99998754321 124467899999998889999999999988889999999999999999999999865 334
Q ss_pred CCchhHHHHhcCCceeecCCCchhhccCCCccceeeccCcchhhhhhhcCCceeccccccchhhhHHhhhhhhceeEEee
Q 012744 316 AYPEGFRERVAARGQMISWSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLRLE 395 (457)
Q Consensus 316 ~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~g~~l~ 395 (457)
.+|++|.++.++|+++++|+||.++|+|+++++||||||+||++|++++|||+|++|++.||+.||+++++.+|+|+.+.
T Consensus 316 ~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~ 395 (454)
T 3hbf_A 316 KLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVD 395 (454)
T ss_dssp HSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECG
T ss_pred cCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEec
Confidence 58899999999999999999999999999999999999999999999999999999999999999999998569999997
Q ss_pred ccCCCccCHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHh
Q 012744 396 RNQSGIIGREEIKNKVDQVLGDQ---NFKARALKLKEKALSSVREGGSSNKAIQNFVQSIK 453 (457)
Q Consensus 396 ~~~~~~~~~~~l~~~i~~~l~~~---~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 453 (457)
. +.+++++|+++|+++|+|+ +||+||+++++++++++++||||.+++++|++++.
T Consensus 396 ~---~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 396 N---GVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp G---GSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred C---CCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 4 5799999999999999987 79999999999999999999999999999999885
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=5.6e-66 Score=509.71 Aligned_cols=450 Identities=33% Similarity=0.635 Sum_probs=340.4
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCC-CCCCCCeEEEecCCCCCCCC----Cc
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGK-NYIGEQIHLVSIPDGMEPWD----DR 75 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~ 75 (457)
|+++||+++|+|++||++|++.||++|++|||+|||++++.+...+.+..... .+..++++|+.+|++++..+ ..
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~ 85 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVS 85 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcc
Confidence 45789999999999999999999999999999999999988776654321000 00113899999998776521 12
Q ss_pred chHHHHHHHHHHhcchHHHHHHHHHhcCC-CCCeeEEEecCCcchHHHHHHHcCCceEEEechhhHHHHHHhhhhhhhhc
Q 012744 76 SDMRKLLEKRLQVMPGKLEGLIEEIHGRE-GEKTACLIADGAAGWAIEVAEKMKLRRAVVVITSAATVALTFSIPKLIED 154 (457)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~ 154 (457)
.+...++..+...+.+.++++++.+.... +.+||+||+|.+..|+..+|+++|||++.++++++.....+.++|.+...
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 165 (482)
T 2pq6_A 86 QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVER 165 (482)
T ss_dssp CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHT
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhc
Confidence 34455555555677888999998886420 15899999999999999999999999999999998877766655655444
Q ss_pred cCCCCCCCC--c---cccccccCCCCCCCccccccccccCCcchhhHHHHHHHHHHHhhhcCcEEEEcCcccccchh---
Q 012744 155 GVINSNGTP--I---KEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNMRATRAADFQLCNSTYELEGGA--- 226 (457)
Q Consensus 155 ~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~--- 226 (457)
+..+..... . .......+|+++.+...+++ .++........+...+.+..+...+++.+++||+++||++.
T Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~~ 244 (482)
T 2pq6_A 166 GIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIV-DFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINA 244 (482)
T ss_dssp TCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSC-GGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHH
T ss_pred CCCCCccccccccccccCccccCCCCCCCchHHCc-hhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHHH
Confidence 444422110 0 01122245666655555555 33332222233445555555666889999999999999863
Q ss_pred -hccCCceeeeCcccCC-CCCC------CCCCCCCCCcchhhHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhcC
Q 012744 227 -FSMIPELLPIGPLLAS-NRLG------NSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTVLEQNQFQELALGLEICN 298 (457)
Q Consensus 227 -~~~~~~~~~vGpl~~~-~~~~------~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~ 298 (457)
++..+++++|||++.. +... ......|+.+.++.+|+|.++++++|||+|||+...+.+.+.+++++++..+
T Consensus 245 ~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~ 324 (482)
T 2pq6_A 245 LSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCK 324 (482)
T ss_dssp HHTTCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHhCCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHHhcC
Confidence 4444899999999864 2110 0001223556779999999888899999999998778888999999999999
Q ss_pred CcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccceeeccCcchhhhhhhcCCceeccccccchh
Q 012744 299 RSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQF 378 (457)
Q Consensus 299 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~ 378 (457)
++|||+++.....+....+|++|.++.++|+++++|+||.++|+|+++++||||||+||++|++++|||+|++|+..||+
T Consensus 325 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ~ 404 (482)
T 2pq6_A 325 KSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQP 404 (482)
T ss_dssp CEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred CcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccchH
Confidence 99999997542111122378889888899999999999999999999999999999999999999999999999999999
Q ss_pred hhHHhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHhcC
Q 012744 379 MNTTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQ---NFKARALKLKEKALSSVREGGSSNKAIQNFVQSIKQW 455 (457)
Q Consensus 379 ~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~---~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 455 (457)
.||+++++.+|+|+.+. ..+++++|.++|+++|+|+ +||+||+++++.+++++.+|||+.+++++|++++...
T Consensus 405 ~na~~~~~~~G~g~~l~----~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~~~ 480 (482)
T 2pq6_A 405 TDCRFICNEWEIGMEID----TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVLLK 480 (482)
T ss_dssp HHHHHHHHTSCCEEECC----SSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCEEEEEC----CCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhc
Confidence 99999973279999985 4589999999999999998 6999999999999999999999999999999998654
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=5.5e-63 Score=486.49 Aligned_cols=435 Identities=29% Similarity=0.502 Sum_probs=330.7
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhC-CCeEEEEeCCc--chhHHHhhhcCCCCCCCCeEEEecCCCCCCC-CCcchH
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKH-GLRITFVNSEY--NHKRVLESLEGKNYIGEQIHLVSIPDGMEPW-DDRSDM 78 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~-Gh~Vt~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 78 (457)
++||+++|+|++||++|++.||++|++| ||+|||++++. +...+.+... ....+++|+.+|+..... ....+.
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~---~~~~~i~~~~l~~~~~~~~~~~~~~ 82 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD---SLPSSISSVFLPPVDLTDLSSSTRI 82 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC----CCTTEEEEECCCCCCTTSCTTCCH
T ss_pred CcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc---ccCCCceEEEcCCCCCCCCCCchhH
Confidence 4799999999999999999999999998 99999999887 3444443110 112489999998653221 112233
Q ss_pred HHHHHHHHHhcchHHHHHHHHHhcCCCCCe-eEEEecCCcchHHHHHHHcCCceEEEechhhHHHHHHhhhhhhhhccCC
Q 012744 79 RKLLEKRLQVMPGKLEGLIEEIHGREGEKT-ACLIADGAAGWAIEVAEKMKLRRAVVVITSAATVALTFSIPKLIEDGVI 157 (457)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 157 (457)
...+......+.+.++++++.+.. . .++ |+||+|.+..|+..+|+++|||++.++++++.....+.++|........
T Consensus 83 ~~~~~~~~~~~~~~l~~ll~~~~~-~-~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (480)
T 2vch_A 83 ESRISLTVTRSNPELRKVFDSFVE-G-GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSC 160 (480)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHH-T-TCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHhhhHHHHHHHHHhcc-C-CCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCC
Confidence 333334445666778888877642 1 578 9999999999999999999999999999998877777666654432211
Q ss_pred CCCCCCccccccccCCCCCCCccccccccccCCcchhhHHHHHHHHHHHhhhcCcEEEEcCcccccchhhc-------cC
Q 012744 158 NSNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNMRATRAADFQLCNSTYELEGGAFS-------MI 230 (457)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~-------~~ 230 (457)
+ +.+. .....+|+++++...+++.. +..+. . .....+.+..+.+.+.+.+++|++.+++.+... ..
T Consensus 161 ~---~~~~-~~~~~~Pg~~p~~~~~l~~~-~~~~~-~-~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~ 233 (480)
T 2vch_A 161 E---FREL-TEPLMLPGCVPVAGKDFLDP-AQDRK-D-DAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDK 233 (480)
T ss_dssp C---GGGC-SSCBCCTTCCCBCGGGSCGG-GSCTT-S-HHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTC
T ss_pred c---cccc-CCcccCCCCCCCChHHCchh-hhcCC-c-hHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCC
Confidence 1 1110 11124677776666666633 32221 1 233444455556677889999999999975321 13
Q ss_pred CceeeeCcccCCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCC
Q 012744 231 PELLPIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDIT 310 (457)
Q Consensus 231 ~~~~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~ 310 (457)
+++++|||++....... ..+.+.++.+|||.++++++|||||||+...+.+++.+++++++..+++|||+++....
T Consensus 234 ~~v~~vGpl~~~~~~~~----~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~ 309 (480)
T 2vch_A 234 PPVYPVGPLVNIGKQEA----KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSG 309 (480)
T ss_dssp CCEEECCCCCCCSCSCC---------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCS
T ss_pred CcEEEEecccccccccc----CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCccc
Confidence 68999999987542210 01356789999999888899999999998888899999999999999999999986421
Q ss_pred C-----------CC-cCCCchhHHHHhcCCceeec-CCCchhhccCCCccceeeccCcchhhhhhhcCCceeccccccch
Q 012744 311 N-----------DA-NDAYPEGFRERVAARGQMIS-WSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQ 377 (457)
Q Consensus 311 ~-----------~~-~~~~~~~~~~~~~~nv~~~~-~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ 377 (457)
. .. ...+|++|.+++.++++++. |+||.+||+|+++++||||||+||++||+++|||||++|++.||
T Consensus 310 ~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ 389 (480)
T 2vch_A 310 IANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQ 389 (480)
T ss_dssp STTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred cccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccc
Confidence 1 11 13588899988888887775 99999999999999999999999999999999999999999999
Q ss_pred hhhHHhh-hhhhceeEEeeccCCCccCHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHh
Q 012744 378 FMNTTYI-CDVWKVGLRLERNQSGIIGREEIKNKVDQVLG---DQNFKARALKLKEKALSSVREGGSSNKAIQNFVQSIK 453 (457)
Q Consensus 378 ~~na~~v-~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~---~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 453 (457)
+.||+++ ++ +|+|+.+...+++.+++++|+++|+++|+ +++||+||+++++++++++.+||++.+++++|++++.
T Consensus 390 ~~na~~l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~ 468 (480)
T 2vch_A 390 KMNAVLLSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWK 468 (480)
T ss_dssp HHHHHHHHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 9999997 56 79999997522236999999999999998 6789999999999999999999999999999999886
Q ss_pred c
Q 012744 454 Q 454 (457)
Q Consensus 454 ~ 454 (457)
.
T Consensus 469 ~ 469 (480)
T 2vch_A 469 A 469 (480)
T ss_dssp H
T ss_pred H
Confidence 3
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=1.5e-63 Score=487.43 Aligned_cols=436 Identities=26% Similarity=0.451 Sum_probs=330.0
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCe--EEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCC-CcchHH
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLR--ITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWD-DRSDMR 79 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~--Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 79 (457)
++||+++|+|++||++|++.||+.|++|||+ ||+++++.+...+.+.... ....+++++.++++++... ......
T Consensus 7 ~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~--~~~~~i~~~~i~~glp~~~~~~~~~~ 84 (456)
T 2c1x_A 7 NPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH--TMQCNIKSYDISDGVPEGYVFAGRPQ 84 (456)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECCCCCCTTCCCCCCTT
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc--cCCCceEEEeCCCCCCCcccccCChH
Confidence 6899999999999999999999999999755 5778876554444322100 0124899999998776642 111222
Q ss_pred HHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHcCCceEEEechhhHHHHHHhhhhhhhhc-cCCC
Q 012744 80 KLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAGWAIEVAEKMKLRRAVVVITSAATVALTFSIPKLIED-GVIN 158 (457)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~-~~~~ 158 (457)
..+..+...+...++++++.+.+..+.+||+||+|.++.|+..+|+++|||++.++++++..+..+.+.+.+... +..+
T Consensus 85 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (456)
T 2c1x_A 85 EDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSG 164 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSSC
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCcc
Confidence 333333344444555666544321116899999999999999999999999999999988777665554433221 1111
Q ss_pred CCCCCccccccccCCCCCCCccccccccccCCcchhhHHHHHHHHHHHhhhcCcEEEEcCcccccchh----hccCCcee
Q 012744 159 SNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNMRATRAADFQLCNSTYELEGGA----FSMIPELL 234 (457)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~----~~~~~~~~ 234 (457)
. .......+..+|+++.+..++++. .+........+...+.+..+...+++.+++||+++||++. ++..|+++
T Consensus 165 ~--~~~~~~~~~~~pg~~~~~~~~lp~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~~ 241 (456)
T 2c1x_A 165 I--QGREDELLNFIPGMSKVRFRDLQE-GIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLKTYL 241 (456)
T ss_dssp C--TTCTTCBCTTSTTCTTCBGGGSCT-TTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHSSCEE
T ss_pred c--ccccccccccCCCCCcccHHhCch-hhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcCCCEE
Confidence 0 011122334577877776777763 2222222223444555555566789999999999999863 44467999
Q ss_pred eeCcccCCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCc
Q 012744 235 PIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDAN 314 (457)
Q Consensus 235 ~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~ 314 (457)
+|||++...... .++.+.++.+|++..+++++|||+|||+.....+.+.+++++++..+++|||+++.. ..
T Consensus 242 ~vGpl~~~~~~~-----~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~----~~ 312 (456)
T 2c1x_A 242 NIGPFNLITPPP-----VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDK----AR 312 (456)
T ss_dssp ECCCHHHHC--------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGG----GG
T ss_pred EecCcccCcccc-----cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCc----ch
Confidence 999998754221 134456789999998888999999999988788889999999999999999999754 23
Q ss_pred CCCchhHHHHhcCCceeecCCCchhhccCCCccceeeccCcchhhhhhhcCCceeccccccchhhhHHhhhhhhceeEEe
Q 012744 315 DAYPEGFRERVAARGQMISWSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLRL 394 (457)
Q Consensus 315 ~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~g~~l 394 (457)
..+|++|.++.++|+++++|+||.++|+|+++++||||||+||++|++++|||+|++|++.||+.||+++++.||+|+.+
T Consensus 313 ~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l 392 (456)
T 2c1x_A 313 VHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI 392 (456)
T ss_dssp GGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC
T ss_pred hhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEe
Confidence 45788888888899999999999999999999999999999999999999999999999999999999999945999999
Q ss_pred eccCCCccCHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHhcC
Q 012744 395 ERNQSGIIGREEIKNKVDQVLGDQ---NFKARALKLKEKALSSVREGGSSNKAIQNFVQSIKQW 455 (457)
Q Consensus 395 ~~~~~~~~~~~~l~~~i~~~l~~~---~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 455 (457)
.. +.+++++|+++|+++|+|+ +||+||+++++.+++++.+||||.+++++|++++.+.
T Consensus 393 ~~---~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~~ 453 (456)
T 2c1x_A 393 EG---GVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKP 453 (456)
T ss_dssp GG---GSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTSC
T ss_pred cC---CCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHhc
Confidence 64 6689999999999999997 8999999999999999999999999999999998653
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=9e-61 Score=469.06 Aligned_cols=428 Identities=25% Similarity=0.443 Sum_probs=328.1
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhC--CCeEEEEeCCcch-----hHHHhhhcCCCCCCCCeEEEecCCCC-CCCCC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKH--GLRITFVNSEYNH-----KRVLESLEGKNYIGEQIHLVSIPDGM-EPWDD 74 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~--Gh~Vt~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 74 (457)
++||+++|+|++||++|++.||+.|++| ||+|||++++.+. ..+.... ....+++|+.+|++. +..+.
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~----~~~~~i~~~~lp~~~~~~~~~ 84 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVL----ASQPQIQLIDLPEVEPPPQEL 84 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHH----CSCTTEEEEECCCCCCCCGGG
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcc----cCCCCceEEECCCCCCCcccc
Confidence 6799999999999999999999999999 9999999988763 2232211 112489999999763 32111
Q ss_pred cchHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHcCCceEEEechhhHHHHHHhhhhhhhhc
Q 012744 75 RSDMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAGWAIEVAEKMKLRRAVVVITSAATVALTFSIPKLIED 154 (457)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~ 154 (457)
.......+......+.+.++++++.+.. .+||+||+|.+..|+..+|+++|||++.++++++..+..+.++|.....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~---~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 161 (463)
T 2acv_A 85 LKSPEFYILTFLESLIPHVKATIKTILS---NKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE 161 (463)
T ss_dssp GGSHHHHHHHHHHHTHHHHHHHHHHHCC---TTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT
T ss_pred cCCccHHHHHHHHhhhHHHHHHHHhccC---CCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhccc
Confidence 1111111333345566678888877622 6899999999999999999999999999999998877777666554311
Q ss_pred cCCCCCCCCcccc--ccccCCCC-CCCccccccccccCCcchhhHHHHHHHHHHHhhhcCcEEEEcCcccccchhhcc--
Q 012744 155 GVINSNGTPIKEQ--MIQLAPNM-PAISTGELFWTGIGDLTMQKFFFDFMVKNMRATRAADFQLCNSTYELEGGAFSM-- 229 (457)
Q Consensus 155 ~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~-- 229 (457)
. + +..... ....+|++ +++...+++..+. .+ .. ....+.+..+...+++.+++||+.++|.+...+
T Consensus 162 ~--~---~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~-~~--~~-~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~ 232 (463)
T 2acv_A 162 E--V---FDDSDRDHQLLNIPGISNQVPSNVLPDACF-NK--DG-GYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALY 232 (463)
T ss_dssp C--C---CCCSSGGGCEECCTTCSSCEEGGGSCHHHH-CT--TT-HHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHH
T ss_pred C--C---CCCccccCceeECCCCCCCCChHHCchhhc-CC--ch-HHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHH
Confidence 0 0 111111 02356777 6666666653222 22 11 334444555566788899999999999865322
Q ss_pred -----CCceeeeCcccCCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCcc-cCCHHHHHHHHHHHhhcCCcEEE
Q 012744 230 -----IPELLPIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHT-VLEQNQFQELALGLEICNRSFLW 303 (457)
Q Consensus 230 -----~~~~~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~a~~~~~~~~i~ 303 (457)
++++++|||++........ ...++.+.++.+|++..+++++|||+|||+. ..+.+.+.+++++++..+++|||
T Consensus 233 ~~~~p~~~v~~vGpl~~~~~~~~~-~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~ 311 (463)
T 2acv_A 233 DHDEKIPPIYAVGPLLDLKGQPNP-KLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLW 311 (463)
T ss_dssp HHCTTSCCEEECCCCCCSSCCCBT-TBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred hccccCCcEEEeCCCccccccccc-ccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEE
Confidence 5789999999875420100 0001235679999999888899999999998 78888899999999999999999
Q ss_pred EEcCCCCCCCcCCCchhHHHHh--cCCceeecCCCchhhccCCCccceeeccCcchhhhhhhcCCceeccccccchhhhH
Q 012744 304 VVRPDITNDANDAYPEGFRERV--AARGQMISWSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQFMNT 381 (457)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~--~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na 381 (457)
+++.. ...+|++|.++. ++|+++++|+||.++|+|+++++||||||+||++|++++|||+|++|++.||+.||
T Consensus 312 ~~~~~-----~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na 386 (463)
T 2acv_A 312 SNSAE-----KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNA 386 (463)
T ss_dssp ECCCC-----GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHH
T ss_pred EECCC-----cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHH
Confidence 99752 124778888887 89999999999999999999999999999999999999999999999999999999
Q ss_pred Hhh-hhhhceeEEe-eccCCC--ccCHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHh
Q 012744 382 TYI-CDVWKVGLRL-ERNQSG--IIGREEIKNKVDQVLG-DQNFKARALKLKEKALSSVREGGSSNKAIQNFVQSIK 453 (457)
Q Consensus 382 ~~v-~~~lG~g~~l-~~~~~~--~~~~~~l~~~i~~~l~-~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 453 (457)
+++ ++ +|+|+.+ ...+.+ .+++++|.++|+++|+ +++||+||+++++.+++++.+||+|.+++++||+++.
T Consensus 387 ~~lv~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 387 FRLVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp HHHHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HHHHHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 995 67 7999999 321124 6899999999999997 4799999999999999999999999999999999885
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=6.5e-47 Score=369.61 Aligned_cols=393 Identities=19% Similarity=0.213 Sum_probs=272.4
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCC-----Cc
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWD-----DR 75 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 75 (457)
|..+||+|+++++.||++|+++||++|+++||+|+|++++.+.+.+... |++|+.++.+++... ..
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~ 80 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA---------GATPVVYDSILPKESNPEESWP 80 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCEEEECCCCSCCTTCTTCCCC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEecCccccccccchhhcc
Confidence 5567999999999999999999999999999999999999988877776 789999886654321 12
Q ss_pred chHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHcCCceEEEechhhHHHHHHhhhhhhhhcc
Q 012744 76 SDMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAGWAIEVAEKMKLRRAVVVITSAATVALTFSIPKLIEDG 155 (457)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 155 (457)
.+....+..+........+.+.+.+++ .+||+||+|.+..++..+|+.+|||++.+++.+...... ...+......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~-~~~~~~~~~~ 156 (424)
T 2iya_A 81 EDQESAMGLFLDEAVRVLPQLEDAYAD---DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGF-EEDVPAVQDP 156 (424)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHTTT---SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTH-HHHSGGGSCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccccc-cccccccccc
Confidence 233333333333333344555555554 799999999988899999999999999998776411000 0000000000
Q ss_pred CCCCCCCCccccccccCCCCCCCccccccccccCCcchhhHHHHHHHHHH----------HhhhcCcEEEEcCcccccch
Q 012744 156 VINSNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNM----------RATRAADFQLCNSTYELEGG 225 (457)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~s~~~le~~ 225 (457)
.. +..... ..|. ...... ...........+...+.+.. .....++.++++++++|+++
T Consensus 157 ~~------~~~~~~-~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~ 224 (424)
T 2iya_A 157 TA------DRGEEA-AAPA----GTGDAE-EGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK 224 (424)
T ss_dssp CC---------------------------------HHHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT
T ss_pred cc------cccccc-cccc----ccccch-hhhccchhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC
Confidence 00 000000 0000 000000 00000000000111111111 11225788999999999987
Q ss_pred hhccCCceeeeCcccCCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEE
Q 012744 226 AFSMIPELLPIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVV 305 (457)
Q Consensus 226 ~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~ 305 (457)
...+++++++|||+...... ..+|++...++++|||++||......+.+..++++++..+.+++|.+
T Consensus 225 ~~~~~~~~~~vGp~~~~~~~-------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~ 291 (424)
T 2iya_A 225 GDTVGDNYTFVGPTYGDRSH-------------QGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSV 291 (424)
T ss_dssp GGGCCTTEEECCCCCCCCGG-------------GCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEEC
T ss_pred ccCCCCCEEEeCCCCCCccc-------------CCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEE
Confidence 56778899999997643210 12466655567899999999876567888999999988889999888
Q ss_pred cCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccceeeccCcchhhhhhhcCCceeccccccchhhhHHhhh
Q 012744 306 RPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQFMNTTYIC 385 (457)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~ 385 (457)
+.... .+.+ +..++|+++.+|+||.++|+++++ ||||||+||++|++++|+|+|++|...||+.||++++
T Consensus 292 g~~~~-------~~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~ 361 (424)
T 2iya_A 292 GRFVD-------PADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIV 361 (424)
T ss_dssp CTTSC-------GGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHH
T ss_pred CCcCC-------hHHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHH
Confidence 75310 1111 123678999999999999999999 9999999999999999999999999999999999999
Q ss_pred hhhceeEEeeccCCCccCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHH
Q 012744 386 DVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQNFKARALKLKEKALSSVREGGSSNKAIQNFV 449 (457)
Q Consensus 386 ~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 449 (457)
+ +|+|+.+.. +.++.++|.++|+++++|++++++++++++++++ .++..+.++.+.
T Consensus 362 ~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~ 417 (424)
T 2iya_A 362 E-LGLGRHIPR---DQVTAEKLREAVLAVASDPGVAERLAAVRQEIRE----AGGARAAADILE 417 (424)
T ss_dssp H-TTSEEECCG---GGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----SCHHHHHHHHHH
T ss_pred H-CCCEEEcCc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh----cCcHHHHHHHHH
Confidence 8 699999864 5689999999999999999999999999999986 344444444443
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=2.2e-45 Score=356.18 Aligned_cols=339 Identities=16% Similarity=0.219 Sum_probs=224.5
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCC----------
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPW---------- 72 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 72 (457)
+|||+|+++|+.||++|+++||++|++|||+|||++++.+.+... . ++.+..+..+....
T Consensus 22 ~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~-~---------g~~~~~~~~~~~~~~~~~~~~~~~ 91 (400)
T 4amg_A 22 SMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE-A---------GLCAVDVSPGVNYAKLFVPDDTDV 91 (400)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT-T---------TCEEEESSTTCCSHHHHSCCC---
T ss_pred CCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh-c---------CCeeEecCCchhHhhhcccccccc
Confidence 689999999999999999999999999999999999988766443 3 67777765332111
Q ss_pred -C----CcchHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHcCCceEEEechhhHHHHHHhh
Q 012744 73 -D----DRSDMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAGWAIEVAEKMKLRRAVVVITSAATVALTFS 147 (457)
Q Consensus 73 -~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~ 147 (457)
. ...........+.......+..+++.+++ .+||+||+|.+..++..+|+.+|||++.+...+.........
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~ 168 (400)
T 4amg_A 92 TDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS---WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGA 168 (400)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHH
T ss_pred ccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhh
Confidence 0 00111111222222222334455555554 799999999999999999999999999876544321110000
Q ss_pred hhhhhhccCCCCCCCCccccccccCCCCCCCccccccccccCCcchhhHHHHHHHHHHHhh-----hcCcEEEEcCcccc
Q 012744 148 IPKLIEDGVINSNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNMRAT-----RAADFQLCNSTYEL 222 (457)
Q Consensus 148 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~s~~~l 222 (457)
...+.+.+..... ......+....+.+
T Consensus 169 ------------------------------------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (400)
T 4amg_A 169 ------------------------------------------------LIRRAMSKDYERHGVTGEPTGSVRLTTTPPSV 200 (400)
T ss_dssp ------------------------------------------------HHHHHTHHHHHHTTCCCCCSCEEEEECCCHHH
T ss_pred ------------------------------------------------HHHHHHHHHHHHhCCCcccccchhhcccCchh
Confidence 0000000000000 11111111111111
Q ss_pred cc--hhhccCCceeeeCcccCCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCcccCC--HHHHHHHHHHHhhcC
Q 012744 223 EG--GAFSMIPELLPIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTVLE--QNQFQELALGLEICN 298 (457)
Q Consensus 223 e~--~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~--~~~~~~~~~a~~~~~ 298 (457)
.. +.....+....+.+.... ....+.+|++...++++|||++||+.... .+.+..+++++.+.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~ 268 (400)
T 4amg_A 201 EALLPEDRRSPGAWPMRYVPYN------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVD 268 (400)
T ss_dssp HHTSCGGGCCTTCEECCCCCCC------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSS
T ss_pred hccCcccccCCcccCccccccc------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccC
Confidence 10 000111222222222111 12223368888888899999999985543 366888999999999
Q ss_pred CcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccceeeccCcchhhhhhhcCCceeccccccchh
Q 012744 299 RSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQF 378 (457)
Q Consensus 299 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~ 378 (457)
.+++|..++. ...... ..++|+++.+|+||.++|+|+++ ||||||+||++|++++|||+|++|++.||+
T Consensus 269 ~~~v~~~~~~----~~~~~~-----~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~ 337 (400)
T 4amg_A 269 AEFVLTLGGG----DLALLG-----ELPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQD 337 (400)
T ss_dssp SEEEEECCTT----CCCCCC-----CCCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CH
T ss_pred ceEEEEecCc----cccccc-----cCCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHH
Confidence 9999998765 111111 13678999999999999999999 999999999999999999999999999999
Q ss_pred hhHHhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Q 012744 379 MNTTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQNFKARALKLKEKALS 433 (457)
Q Consensus 379 ~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~ 433 (457)
.||+++++ +|+|+.++. .+.+ +++|+++|+|++||++|+++++++++
T Consensus 338 ~na~~v~~-~G~g~~l~~---~~~~----~~al~~lL~d~~~r~~a~~l~~~~~~ 384 (400)
T 4amg_A 338 TNRDVLTG-LGIGFDAEA---GSLG----AEQCRRLLDDAGLREAALRVRQEMSE 384 (400)
T ss_dssp HHHHHHHH-HTSEEECCT---TTCS----HHHHHHHHHCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHH-CCCEEEcCC---CCch----HHHHHHHHcCHHHHHHHHHHHHHHHc
Confidence 99999999 699999974 4444 45788899999999999999999987
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.4e-43 Score=344.66 Aligned_cols=378 Identities=13% Similarity=0.110 Sum_probs=256.6
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCC-CC-cchHHHH
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPW-DD-RSDMRKL 81 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~ 81 (457)
|||+|++.|+.||++|+++||++|+++||+|+|++++.+.+.+... |++++.++...... .. .......
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~i~~~~~~~~~~~~~~~~~~ 71 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV---------GVPHVPVGPSARAPIQRAKPLTAED 71 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEECCC-------CCSCCCHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc---------CCeeeeCCCCHHHHhhcccccchHH
Confidence 6899999999999999999999999999999999999877776665 78888887543211 00 1111111
Q ss_pred HHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecC-Ccch--HHHHHHHcCCceEEEechhhHHHHHHhhhhhhhhccCCC
Q 012744 82 LEKRLQVMPGKLEGLIEEIHGREGEKTACLIADG-AAGW--AIEVAEKMKLRRAVVVITSAATVALTFSIPKLIEDGVIN 158 (457)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 158 (457)
+..+ +.....++++.+.... .+||+||+|. +..+ +..+|+++|||++.+++.+..... ..
T Consensus 72 ~~~~---~~~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~-----------~~-- 134 (415)
T 1iir_A 72 VRRF---TTEAIATQFDEIPAAA-EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS-----------PY-- 134 (415)
T ss_dssp HHHH---HHHHHHHHHHHHHHHT-TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SS--
T ss_pred HHHH---HHHHHHHHHHHHHHHh-cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC-----------cc--
Confidence 1111 1122233344433211 7899999997 5668 899999999999999877643100 00
Q ss_pred CCCCCccccccccCCCCCCCccccccccccCCcchhhHHHH----HHHHHHH------------hhhcCcEEEEcCcccc
Q 012744 159 SNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFD----FMVKNMR------------ATRAADFQLCNSTYEL 222 (457)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~------------~~~~~~~~l~~s~~~l 222 (457)
+|...... .+++ +... +.+........... .+..... ..... .+++|+++.|
T Consensus 135 ---~p~~~~~~-~~~~------~~~~-n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l 202 (415)
T 1iir_A 135 ---YPPPPLGE-PSTQ------DTID-IPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVL 202 (415)
T ss_dssp ---SCCCC----------------CH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTT
T ss_pred ---cCCccCCc-cccc------hHHH-HHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhh
Confidence 00000000 0000 0000 00000000000000 1111111 11122 6899999999
Q ss_pred cc-hhhccCCceeeeCcccCCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhcCCcE
Q 012744 223 EG-GAFSMIPELLPIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTVLEQNQFQELALGLEICNRSF 301 (457)
Q Consensus 223 e~-~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~ 301 (457)
++ + .+.. ++++|||+..++. ++.+.++.+|++.. +++|||++||+. ...+.+..++++++..+.++
T Consensus 203 ~~~~-~~~~-~~~~vG~~~~~~~--------~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~ 269 (415)
T 1iir_A 203 APLQ-PTDL-DAVQTGAWILPDE--------RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRV 269 (415)
T ss_dssp SCCC-CCSS-CCEECCCCCCCCC--------CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCE
T ss_pred cCCC-cccC-CeEeeCCCccCcc--------cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeE
Confidence 87 4 3323 8999999987532 24567789999865 369999999987 56778888999999999999
Q ss_pred EEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccceeeccCcchhhhhhhcCCceeccccccchhhhH
Q 012744 302 LWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQFMNT 381 (457)
Q Consensus 302 i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na 381 (457)
+|+++... .. . . ..++|+++.+|+||.++|+++++ ||||||+||++|++++|+|+|++|...||..||
T Consensus 270 v~~~g~~~----~~-~-~----~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na 337 (415)
T 1iir_A 270 ILSRGWAD----LV-L-P----DDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYA 337 (415)
T ss_dssp EECTTCTT----CC-C-S----SCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHH
T ss_pred EEEeCCCc----cc-c-c----CCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHHH
Confidence 99887541 11 1 1 13567889999999999988888 999999999999999999999999999999999
Q ss_pred HhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHhc
Q 012744 382 TYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQNFKARALKLKEKALSSVREGGSSNKAIQNFVQSIKQ 454 (457)
Q Consensus 382 ~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 454 (457)
+++++ +|+|+.+.. ..++.++|.++|+++ +|++|+++++++++++++ ......+.+.+.++.+
T Consensus 338 ~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~~~ 400 (415)
T 1iir_A 338 GRVAE-LGVGVAHDG---PIPTFDSLSAALATA-LTPETHARATAVAGTIRT-----DGAAVAARLLLDAVSR 400 (415)
T ss_dssp HHHHH-HTSEEECSS---SSCCHHHHHHHHHHH-TSHHHHHHHHHHHHHSCS-----CHHHHHHHHHHHHHHT
T ss_pred HHHHH-CCCcccCCc---CCCCHHHHHHHHHHH-cCHHHHHHHHHHHHHHhh-----cChHHHHHHHHHHHHh
Confidence 99988 699999864 568999999999999 999999999999998864 3334455555555543
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=4.4e-43 Score=341.44 Aligned_cols=378 Identities=15% Similarity=0.081 Sum_probs=259.9
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCC-C--cchHHH
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWD-D--RSDMRK 80 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~ 80 (457)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+... |++++.++....... . ......
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV---------GVPHVPVGLPQHMMLQEGMPPPPPE 71 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCCEEECSCCGGGCCCTTSCCCCHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCeeeecCCCHHHHHhhccccchhH
Confidence 6899999999999999999999999999999999998887777766 788888875421110 0 011111
Q ss_pred HHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecC-Ccch--HHHHHHHcCCceEEEechhhHHHHHHhhhhhhhhccCC
Q 012744 81 LLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADG-AAGW--AIEVAEKMKLRRAVVVITSAATVALTFSIPKLIEDGVI 157 (457)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~ 157 (457)
.+..+.. .....+++.+.... .+||+||+|. +..+ +..+|+.+|||++.+.+.+..... ..
T Consensus 72 ~~~~~~~---~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~-----------~~- 135 (416)
T 1rrv_A 72 EEQRLAA---MTVEMQFDAVPGAA-EGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS-----------PH- 135 (416)
T ss_dssp HHHHHHH---HHHHHHHHHHHHHT-TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SS-
T ss_pred HHHHHHH---HHHHHHHHHHHHHh-cCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC-----------cc-
Confidence 1111111 22234444444111 7899999997 3456 899999999999998876532100 00
Q ss_pred CCCCCCccccccccCCCCCCCccccccccccCCcchhhHH----HHHHHHHH------------HhhhcCcEEEEcCccc
Q 012744 158 NSNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFF----FDFMVKNM------------RATRAADFQLCNSTYE 221 (457)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~------------~~~~~~~~~l~~s~~~ 221 (457)
++ . . . +++ ....... +.+......... ...+.... +...+. .++++++++
T Consensus 136 ----~p-~---~--~-~~~-~~~~r~~-n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~ 201 (416)
T 1rrv_A 136 ----LP-P---A--Y-DEP-TTPGVTD-IRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPV 201 (416)
T ss_dssp ----SC-C---C--B-CSC-CCTTCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTT
T ss_pred ----cC-C---C--C-CCC-CCchHHH-HHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCcc
Confidence 00 0 0 0 000 0000000 000000000000 00011111 111233 799999999
Q ss_pred ccchhhccCCceeeeCcccCCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCccc-CCHHHHHHHHHHHhhcCCc
Q 012744 222 LEGGAFSMIPELLPIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTV-LEQNQFQELALGLEICNRS 300 (457)
Q Consensus 222 le~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~a~~~~~~~ 300 (457)
|+++ .+.. ++++|||+..+.. ++.+.++.+|++.. +++|||++||... ...+.+..++++++..+.+
T Consensus 202 l~~~-~~~~-~~~~vG~~~~~~~--------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~ 269 (416)
T 1rrv_A 202 LAPL-QPDV-DAVQTGAWLLSDE--------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRR 269 (416)
T ss_dssp TSCC-CSSC-CCEECCCCCCCCC--------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCC
T ss_pred ccCC-CCCC-CeeeECCCccCcc--------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCe
Confidence 9876 3322 8999999987532 24567788999865 3689999999854 4556788899999999999
Q ss_pred EEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccceeeccCcchhhhhhhcCCceeccccccchhhh
Q 012744 301 FLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQFMN 380 (457)
Q Consensus 301 ~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~n 380 (457)
++|+++.. ... . +..++|+.+.+|+||.++|+++++ ||||||+||++|++++|+|+|++|...||+.|
T Consensus 270 ~v~~~g~~----~~~-~-----~~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~n 337 (416)
T 1rrv_A 270 VILSRGWT----ELV-L-----PDDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYF 337 (416)
T ss_dssp EEEECTTT----TCC-C-----SCCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHH
T ss_pred EEEEeCCc----ccc-c-----cCCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCcHHH
Confidence 99998754 111 1 123678999999999999998888 99999999999999999999999999999999
Q ss_pred HHhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHhc
Q 012744 381 TTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQNFKARALKLKEKALSSVREGGSSNKAIQNFVQSIKQ 454 (457)
Q Consensus 381 a~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 454 (457)
|+++++ +|+|+.+.. ...+.++|.++|+++ +|++|+++++++++++++ .++. +.++.+++++.+
T Consensus 338 a~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~l-~~~~~~~~~~~~~~~~~~----~~~~-~~~~~i~e~~~~ 401 (416)
T 1rrv_A 338 AGRVAA-LGIGVAHDG---PTPTFESLSAALTTV-LAPETRARAEAVAGMVLT----DGAA-AAADLVLAAVGR 401 (416)
T ss_dssp HHHHHH-HTSEEECSS---SCCCHHHHHHHHHHH-TSHHHHHHHHHHTTTCCC----CHHH-HHHHHHHHHHHC
T ss_pred HHHHHH-CCCccCCCC---CCCCHHHHHHHHHHh-hCHHHHHHHHHHHHHHhh----cCcH-HHHHHHHHHHhc
Confidence 999999 699998864 568999999999999 999999999999988875 3333 444444255543
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.2e-41 Score=331.65 Aligned_cols=379 Identities=14% Similarity=0.176 Sum_probs=267.6
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCc-----ch
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDR-----SD 77 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 77 (457)
.+||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+... ++.+..++...+..... .+
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 90 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA---------GATVVPYQSEIIDADAAEVFGSDD 90 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCSTTTCCHHHHHHSSS
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc---------CCEEEeccccccccccchhhcccc
Confidence 47999999999999999999999999999999999998888888766 89999988654432110 01
Q ss_pred HHHHHHH-HHHhcchHHHHHHHHHhcCCCCCeeEEEec-CCcchHHHHHHHcCCceEEEechhhHHHHHHhhhhhhhhcc
Q 012744 78 MRKLLEK-RLQVMPGKLEGLIEEIHGREGEKTACLIAD-GAAGWAIEVAEKMKLRRAVVVITSAATVALTFSIPKLIEDG 155 (457)
Q Consensus 78 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 155 (457)
....+.. +.......+..+.+.+++ .+||+||+| ....++..+|+.+|||++.+.+........ ...+.....
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~l~~---~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~-~~~~~~~~~- 165 (415)
T 3rsc_A 91 LGVRPHLMYLRENVSVLRATAEALDG---DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHY-SFSQDMVTL- 165 (415)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHSS---SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSC-CHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCcc-ccccccccc-
Confidence 1111111 222223344555555555 899999999 777789999999999999987544310000 000000000
Q ss_pred CCCCCCCCccccccccCCCCCCCccccccccccCCcchhhHHHHHHHH------HHHhhhcC-cEEEEcCcccccchhhc
Q 012744 156 VINSNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVK------NMRATRAA-DFQLCNSTYELEGGAFS 228 (457)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-~~~l~~s~~~le~~~~~ 228 (457)
.....+ ..+ ......+.....+ ........ +..++...+.++++...
T Consensus 166 ---------------~~~~~p---------~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 219 (415)
T 3rsc_A 166 ---------------AGTIDP---------LDL--PVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDT 219 (415)
T ss_dssp ---------------HTCCCG---------GGC--HHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTGGG
T ss_pred ---------------cccCCh---------hhH--HHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCCccc
Confidence 000000 000 0000001111110 00111223 88899999999887556
Q ss_pred cCCceeeeCcccCCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCC
Q 012744 229 MIPELLPIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPD 308 (457)
Q Consensus 229 ~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~ 308 (457)
++.++.++||...+... ...|....+++++||+++||......+.+..+++++...+.+++|.++..
T Consensus 220 ~~~~~~~vGp~~~~~~~-------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~ 286 (415)
T 3rsc_A 220 FDDRFVFVGPCFDDRRF-------------LGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQ 286 (415)
T ss_dssp CCTTEEECCCCCCCCGG-------------GCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTT
T ss_pred CCCceEEeCCCCCCccc-------------CcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCC
Confidence 67889999998754321 11344444567899999999876677889999999988889999988753
Q ss_pred CCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccceeeccCcchhhhhhhcCCceeccccccchhhhHHhhhhhh
Q 012744 309 ITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQFMNTTYICDVW 388 (457)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~l 388 (457)
.. ....+..++|+++.+|+|+.++|++|++ +|||||+||+.|++++|+|+|++|...||+.||+++++ .
T Consensus 287 ~~--------~~~l~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~-~ 355 (415)
T 3rsc_A 287 VD--------PAALGDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQ-L 355 (415)
T ss_dssp SC--------GGGGCCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHH-H
T ss_pred CC--------hHHhcCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHH-c
Confidence 10 1111123678999999999999999999 99999999999999999999999999999999999999 5
Q ss_pred ceeEEeeccCCCccCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH
Q 012744 389 KVGLRLERNQSGIIGREEIKNKVDQVLGDQNFKARALKLKEKALSSVREGGSSNKAIQNFVQSI 452 (457)
Q Consensus 389 G~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 452 (457)
|+|..+.. ++++.++|.++|+++++|++++++++++++++.+ .++..+.++.+.+.+
T Consensus 356 g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~ 412 (415)
T 3rsc_A 356 GLGAVLPG---EKADGDTLLAAVGAVAADPALLARVEAMRGHVRR----AGGAARAADAVEAYL 412 (415)
T ss_dssp TCEEECCG---GGCCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH----SCHHHHHHHHHHHHH
T ss_pred CCEEEccc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHh
Confidence 99999974 5689999999999999999999999999999987 455555555544433
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=3.8e-41 Score=326.68 Aligned_cols=377 Identities=16% Similarity=0.188 Sum_probs=267.7
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCC-----CCc
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPW-----DDR 75 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 75 (457)
|..+||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+... |+.+..++...+.. ...
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~ 72 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA---------GAEVVLYKSEFDTFHVPEVVKQ 72 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT---------TCEEEECCCGGGTSSSSSSSCC
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc---------CCEEEecccccccccccccccc
Confidence 5556999999999999999999999999999999999998888877765 89999887533322 122
Q ss_pred chHHHHHHH-HHHhcchHHHHHHHHHhcCCCCCeeEEEec-CCcchHHHHHHHcCCceEEEechhhHHHHHHhhhhhhhh
Q 012744 76 SDMRKLLEK-RLQVMPGKLEGLIEEIHGREGEKTACLIAD-GAAGWAIEVAEKMKLRRAVVVITSAATVALTFSIPKLIE 153 (457)
Q Consensus 76 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~ 153 (457)
.+....+.. +.......+..+.+.+++ .+||+||+| .+..++..+|+.+|||++.+.+........ ...+....
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~-~~~~~~~~ 148 (402)
T 3ia7_A 73 EDAETQLHLVYVRENVAILRAAEEALGD---NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHY-SLFKELWK 148 (402)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHTT---CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTB-CHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccc-cccccccc
Confidence 233333333 333333445566666655 899999999 777789999999999999987544310000 00000000
Q ss_pred ccCCCCCCCCccccccccCCCCCCCccccccccccCCcchhhHHHHHHHHHH----------HhhhcC-cEEEEcCcccc
Q 012744 154 DGVINSNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNM----------RATRAA-DFQLCNSTYEL 222 (457)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-~~~l~~s~~~l 222 (457)
.. .. ..+ . ....+...+.... ...... +..++...+++
T Consensus 149 ~~-----------------~~-------~~~-~------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~ 197 (402)
T 3ia7_A 149 SN-----------------GQ-------RHP-A------DVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSF 197 (402)
T ss_dssp HH-----------------TC-------CCG-G------GSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGG
T ss_pred cc-----------------cc-------cCh-h------hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHh
Confidence 00 00 000 0 0000001111100 111222 77888888888
Q ss_pred cchhhccCCceeeeCcccCCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEE
Q 012744 223 EGGAFSMIPELLPIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTVLEQNQFQELALGLEICNRSFL 302 (457)
Q Consensus 223 e~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i 302 (457)
+.+...++.++.+|||........ ..|....+++++||+++||......+.+..+++++...+.+++
T Consensus 198 ~~~~~~~~~~~~~vGp~~~~~~~~-------------~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (402)
T 3ia7_A 198 QPFAETFDERFAFVGPTLTGRDGQ-------------PGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVV 264 (402)
T ss_dssp STTGGGCCTTEEECCCCCCC-----------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEE
T ss_pred CCccccCCCCeEEeCCCCCCcccC-------------CCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEE
Confidence 877555678899999987543211 1244444567799999999977677789999999988888888
Q ss_pred EEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccceeeccCcchhhhhhhcCCceecccc-ccchhhhH
Q 012744 303 WVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPF-FADQFMNT 381 (457)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~-~~DQ~~na 381 (457)
+.++.... ....+..++|+.+.+|+|+.++|++|++ +|||||+||+.|++++|+|+|++|. ..||..||
T Consensus 265 ~~~g~~~~--------~~~~~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a 334 (402)
T 3ia7_A 265 MAIGGFLD--------PAVLGPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSA 334 (402)
T ss_dssp EECCTTSC--------GGGGCSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHH
T ss_pred EEeCCcCC--------hhhhCCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHH
Confidence 88875310 1111124678999999999999999999 9999999999999999999999999 99999999
Q ss_pred HhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH
Q 012744 382 TYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQNFKARALKLKEKALSSVREGGSSNKAIQNFVQSI 452 (457)
Q Consensus 382 ~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 452 (457)
+++++ .|+|..+.. ++++.++|.++|+++++|++++++++++++++.+ .++..+.++.+.+.+
T Consensus 335 ~~~~~-~g~g~~~~~---~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~ 397 (402)
T 3ia7_A 335 ERVIE-LGLGSVLRP---DQLEPASIREAVERLAADSAVRERVRRMQRDILS----SGGPARAADEVEAYL 397 (402)
T ss_dssp HHHHH-TTSEEECCG---GGCSHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----SCHHHHHHHHHHHHH
T ss_pred HHHHH-cCCEEEccC---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh----CChHHHHHHHHHHHH
Confidence 99999 599999974 5689999999999999999999999999999876 455555555444433
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=2.3e-42 Score=334.56 Aligned_cols=351 Identities=15% Similarity=0.111 Sum_probs=248.8
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCC--CCcchHHHH
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPW--DDRSDMRKL 81 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 81 (457)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+... ++.+..++...... .........
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~---------g~~~~~l~~~~~~~~~~~~~~~~~~ 71 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV---------GVPMVPVGRAVRAGAREPGELPPGA 71 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT---------TCCEEECSSCSSGGGSCTTCCCTTC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc---------CCceeecCCCHHHHhccccCCHHHH
Confidence 6899999999999999999999999999999999999988888776 78888887443211 000000000
Q ss_pred HHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcchH---HHHHHHcCCceEEEechhhHHHHHHhhhhhhhhccCCC
Q 012744 82 LEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAGWA---IEVAEKMKLRRAVVVITSAATVALTFSIPKLIEDGVIN 158 (457)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~ 158 (457)
...+.......++.+.+.+ .+||+||+|.....+ ..+|+.+|||++.+..++.......
T Consensus 72 ~~~~~~~~~~~~~~l~~~~-----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~------------- 133 (404)
T 3h4t_A 72 AEVVTEVVAEWFDKVPAAI-----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQ------------- 133 (404)
T ss_dssp GGGHHHHHHHHHHHHHHHH-----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGS-------------
T ss_pred HHHHHHHHHHHHHHHHHHh-----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChh-------------
Confidence 0111111112222332222 479999999665544 7899999999999887765210000
Q ss_pred CCCCCccccccccCCCCCCCccccccccccCCcchhhHHHHHHHHHHHh-----------hhcCcEEEEcCcccccchhh
Q 012744 159 SNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNMRA-----------TRAADFQLCNSTYELEGGAF 227 (457)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~s~~~le~~~~ 227 (457)
+. ..+.. ........+...+.+.... ....+..+.+..+.+.+. .
T Consensus 134 ----------------~~------~~~~~-~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~-~ 189 (404)
T 3h4t_A 134 ----------------SQ------AERDM-YNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL-R 189 (404)
T ss_dssp ----------------CH------HHHHH-HHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC-C
T ss_pred ----------------HH------HHHHH-HHHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC-C
Confidence 00 00000 0000000000000000000 011234566788888665 5
Q ss_pred ccCCceeeeCcccCCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcC
Q 012744 228 SMIPELLPIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRP 307 (457)
Q Consensus 228 ~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~ 307 (457)
++++++.++|++..+.. .+.+.++.+|++.. +++|||++||+.. ..+.+..+++++.+.+.++||+++.
T Consensus 190 ~~~~~~~~~G~~~~~~~--------~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~ 258 (404)
T 3h4t_A 190 PTDLGTVQTGAWILPDQ--------RPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGW 258 (404)
T ss_dssp TTCCSCCBCCCCCCCCC--------CCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTT
T ss_pred CCCCCeEEeCccccCCC--------CCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 67789999998876532 24567888999853 5699999999876 6778999999999999999999875
Q ss_pred CCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccceeeccCcchhhhhhhcCCceeccccccchhhhHHhhhhh
Q 012744 308 DITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQFMNTTYICDV 387 (457)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~ 387 (457)
. ... ... .++|+++.+|+||.++|+++++ +|||||+||+.|++++|+|+|++|+..||+.||+++++
T Consensus 259 ~----~~~-~~~-----~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~- 325 (404)
T 3h4t_A 259 A----GLG-RID-----EGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVAD- 325 (404)
T ss_dssp T----TCC-CSS-----CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-
T ss_pred c----ccc-ccc-----CCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHH-
Confidence 4 111 111 2678999999999999999999 99999999999999999999999999999999999999
Q ss_pred hceeEEeeccCCCccCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Q 012744 388 WKVGLRLERNQSGIIGREEIKNKVDQVLGDQNFKARALKLKEKALS 433 (457)
Q Consensus 388 lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~ 433 (457)
.|+|..+.. ..++.++|.++|+++++ ++|+++++++++.+++
T Consensus 326 ~G~g~~l~~---~~~~~~~l~~ai~~ll~-~~~~~~~~~~~~~~~~ 367 (404)
T 3h4t_A 326 LGVGVAHDG---PTPTVESLSAALATALT-PGIRARAAAVAGTIRT 367 (404)
T ss_dssp HTSEEECSS---SSCCHHHHHHHHHHHTS-HHHHHHHHHHHTTCCC
T ss_pred CCCEeccCc---CCCCHHHHHHHHHHHhC-HHHHHHHHHHHHHHhh
Confidence 599999874 66899999999999998 9999999999988763
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.1e-40 Score=327.00 Aligned_cols=369 Identities=13% Similarity=0.153 Sum_probs=246.9
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCC-----------
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEP----------- 71 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 71 (457)
.|||+|++.|+.||++|+++||++|+++||+|+|++++.+.+.+... |+.++.++.....
T Consensus 20 ~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~---------G~~~~~i~~~~~~~~~~~~~~~~~ 90 (441)
T 2yjn_A 20 HMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA---------GLTAVPVGTDVDLVDFMTHAGHDI 90 (441)
T ss_dssp CCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------TCCEEECSCCCCHHHHHHHTTHHH
T ss_pred ccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC---------CCceeecCCccchHHHhhhhhccc
Confidence 57999999999999999999999999999999999998887777665 8999988754310
Q ss_pred ------CCC----cc--hHH---HHHHHHHHh----c-ch-HHHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHcCCc
Q 012744 72 ------WDD----RS--DMR---KLLEKRLQV----M-PG-KLEGLIEEIHGREGEKTACLIADGAAGWAIEVAEKMKLR 130 (457)
Q Consensus 72 ------~~~----~~--~~~---~~~~~~~~~----~-~~-~~~~~~~~l~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP 130 (457)
.+. .. .+. .....+... + .. .+.++++.+++ .+||+||+|.++.++..+|+.+|||
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~aA~~lgiP 167 (441)
T 2yjn_A 91 IDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK---WRPDLVIWEPLTFAAPIAAAVTGTP 167 (441)
T ss_dssp HHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHHTCC
T ss_pred ccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh---cCCCEEEecCcchhHHHHHHHcCCC
Confidence 000 10 111 111112111 1 12 56666666665 7999999999878999999999999
Q ss_pred eEEEechhhHHHHHHhhhhhhhhccCCCCCCCCccccccccCCCCCCCccccccccccCCcchhhHHHHHHHHHHHhh--
Q 012744 131 RAVVVITSAATVALTFSIPKLIEDGVINSNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNMRAT-- 208 (457)
Q Consensus 131 ~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 208 (457)
++.+...+.........++... . ..+. .... ....+.+.+....+
T Consensus 168 ~v~~~~~~~~~~~~~~~~~~~~--~---------------~~~~-----------~~~~-----~~~~~~l~~~~~~~g~ 214 (441)
T 2yjn_A 168 HARLLWGPDITTRARQNFLGLL--P---------------DQPE-----------EHRE-----DPLAEWLTWTLEKYGG 214 (441)
T ss_dssp EEEECSSCCHHHHHHHHHHHHG--G---------------GSCT-----------TTCC-----CHHHHHHHHHHHHTTC
T ss_pred EEEEecCCCcchhhhhhhhhhc--c---------------cccc-----------cccc-----chHHHHHHHHHHHcCC
Confidence 9998654432111100000000 0 0000 0000 00111111111111
Q ss_pred -------hcCcEEEEcCcccccchhhccCC-ceeeeCcccCCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCcc
Q 012744 209 -------RAADFQLCNSTYELEGGAFSMIP-ELLPIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHT 280 (457)
Q Consensus 209 -------~~~~~~l~~s~~~le~~~~~~~~-~~~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~ 280 (457)
...+.++..+.+.++.+ ..++. .+.++++ . .+.++.+|++..+++++|||++||..
T Consensus 215 ~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~---~------------~~~~~~~~l~~~~~~~~v~v~~Gs~~ 278 (441)
T 2yjn_A 215 PAFDEEVVVGQWTIDPAPAAIRLD-TGLKTVGMRYVDY---N------------GPSVVPEWLHDEPERRRVCLTLGISS 278 (441)
T ss_dssp CCCCGGGTSCSSEEECSCGGGSCC-CCCCEEECCCCCC---C------------SSCCCCGGGSSCCSSCEEEEEC----
T ss_pred CCCCccccCCCeEEEecCccccCC-CCCCCCceeeeCC---C------------CCcccchHhhcCCCCCEEEEECCCCc
Confidence 12445666666666543 23321 2222211 0 11234478887666789999999986
Q ss_pred cC---CHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccceeeccCcch
Q 012744 281 VL---EQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCFMSHCGWNS 357 (457)
Q Consensus 281 ~~---~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s 357 (457)
.. ..+.+..+++++...++++||++++. ....+. ..++|+++.+|+||.++|+++++ ||||||+||
T Consensus 279 ~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~----~~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t 347 (441)
T 2yjn_A 279 RENSIGQVSIEELLGAVGDVDAEIIATFDAQ----QLEGVA-----NIPDNVRTVGFVPMHALLPTCAA--TVHHGGPGS 347 (441)
T ss_dssp ------CCSTTTTHHHHHTSSSEEEECCCTT----TTSSCS-----SCCSSEEECCSCCHHHHGGGCSE--EEECCCHHH
T ss_pred ccccChHHHHHHHHHHHHcCCCEEEEEECCc----chhhhc-----cCCCCEEEecCCCHHHHHhhCCE--EEECCCHHH
Confidence 53 34567788899988899999988754 112221 13678999999999999999999 999999999
Q ss_pred hhhhhhcCCceeccccccchhhhHHhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhc
Q 012744 358 TTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQNFKARALKLKEKALSSVRE 437 (457)
Q Consensus 358 ~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~ 437 (457)
++|++++|+|+|++|...||+.||+++++ .|+|+.+.. +.++.++|.++|.++++|++++++++++++++.+
T Consensus 348 ~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~---- 419 (441)
T 2yjn_A 348 WHTAAIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPV---PELTPDQLRESVKRVLDDPAHRAGAARMRDDMLA---- 419 (441)
T ss_dssp HHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCT---TTCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----
T ss_pred HHHHHHhCCCEEEeCCcccHHHHHHHHHH-cCCEEEccc---ccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHc----
Confidence 99999999999999999999999999999 599999874 5689999999999999999999999999999886
Q ss_pred CCChHHHHHHHHHHH
Q 012744 438 GGSSNKAIQNFVQSI 452 (457)
Q Consensus 438 ~g~~~~~~~~~~~~~ 452 (457)
..+..+. .+.|.++
T Consensus 420 ~~~~~~~-~~~i~~~ 433 (441)
T 2yjn_A 420 EPSPAEV-VGICEEL 433 (441)
T ss_dssp SCCHHHH-HHHHHHH
T ss_pred CCCHHHH-HHHHHHH
Confidence 3444444 4444444
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=6e-40 Score=321.00 Aligned_cols=364 Identities=15% Similarity=0.177 Sum_probs=252.5
Q ss_pred CCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCC-----cc
Q 012744 2 SSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDD-----RS 76 (457)
Q Consensus 2 ~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 76 (457)
..+||+|++.++.||++|++.||++|+++||+|+++++....+.+... |++++.++...+.... ..
T Consensus 6 ~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~ 76 (430)
T 2iyf_A 6 TPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAAT---------GPRPVLYHSTLPGPDADPEAWGS 76 (430)
T ss_dssp --CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTT---------SCEEEECCCCSCCTTSCGGGGCS
T ss_pred ccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEEcCCcCccccccccccch
Confidence 346999999999999999999999999999999999998877666554 7899988865432211 12
Q ss_pred hHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHcCCceEEEechhhHHHHHHhhh-hhhhhcc
Q 012744 77 DMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAGWAIEVAEKMKLRRAVVVITSAATVALTFSI-PKLIEDG 155 (457)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~-p~~~~~~ 155 (457)
+....+..+...+...+..+.+.+++ .+||+||+|.+..++..+|+.+|||++.+++............ .....
T Consensus 77 ~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~-- 151 (430)
T 2iyf_A 77 TLLDNVEPFLNDAIQALPQLADAYAD---DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMWR-- 151 (430)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTT---SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHHH--
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchhh--
Confidence 33333333333233344555555555 8999999998777899999999999999886543100000000 00000
Q ss_pred CCCCCCCCccccccccCCCCCCCccccccccccCCcchhhHHHHHHHH------HHHhhhcCcEEEEcCcccccchhhcc
Q 012744 156 VINSNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVK------NMRATRAADFQLCNSTYELEGGAFSM 229 (457)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~s~~~le~~~~~~ 229 (457)
...+.+. . ..+ .....+.+.+ ..+....++.+++++.+.++.+...+
T Consensus 152 ---------------~~~~~~~-----~--~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 204 (430)
T 2iyf_A 152 ---------------EPRQTER-----G--RAY-----YARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHADRV 204 (430)
T ss_dssp ---------------HHHHSHH-----H--HHH-----HHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGGGS
T ss_pred ---------------hhccchH-----H--HHH-----HHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCcccC
Confidence 0000000 0 000 0000011100 00112257889999999998764566
Q ss_pred CCc-eeeeCcccCCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhc-CCcEEEEEcC
Q 012744 230 IPE-LLPIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTVLEQNQFQELALGLEIC-NRSFLWVVRP 307 (457)
Q Consensus 230 ~~~-~~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~ 307 (457)
+++ +++|||....... ..+|.+..+++++||+++||......+.+..+++++... +.+++|.++.
T Consensus 205 ~~~~v~~vG~~~~~~~~-------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~ 271 (430)
T 2iyf_A 205 DEDVYTFVGACQGDRAE-------------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGR 271 (430)
T ss_dssp CTTTEEECCCCC------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC-
T ss_pred CCccEEEeCCcCCCCCC-------------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 678 9999986543211 013444445577999999998855677888899999885 7888888864
Q ss_pred CCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccceeeccCcchhhhhhhcCCceeccccccchhhhHHhhhhh
Q 012744 308 DITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQFMNTTYICDV 387 (457)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~ 387 (457)
.. ..+.+ +..++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..|++++++
T Consensus 272 ~~-------~~~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~- 340 (430)
T 2iyf_A 272 KV-------TPAEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQG- 340 (430)
T ss_dssp ---------CGGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-
T ss_pred CC-------ChHHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHH-
Confidence 31 01111 123578999999999999999999 99999999999999999999999999999999999999
Q ss_pred hceeEEeeccCCCccCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Q 012744 388 WKVGLRLERNQSGIIGREEIKNKVDQVLGDQNFKARALKLKEKALS 433 (457)
Q Consensus 388 lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~ 433 (457)
.|+|+.+.. +.++.++|+++|.++++|+++++++.++++++.+
T Consensus 341 ~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 341 LGVARKLAT---EEATADLLRETALALVDDPEVARRLRRIQAEMAQ 383 (430)
T ss_dssp TTSEEECCC---C-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred cCCEEEcCC---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 599999864 5679999999999999999999999999998876
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=2.1e-39 Score=312.34 Aligned_cols=349 Identities=13% Similarity=0.126 Sum_probs=250.0
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCC------------CC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGM------------EP 71 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~ 71 (457)
|||+|++.++.||++|+++||++|+++||+|++++++...+.+... |+.++.++... +.
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV---------GLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC---------CCEEEEeCCcchHHHHhhhcccCcc
Confidence 5899999999999999999999999999999999998876666654 78888886532 00
Q ss_pred CCCcc-hHHHHH-HH-HHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHcCCceEEEechhhHHHHHHhhh
Q 012744 72 WDDRS-DMRKLL-EK-RLQVMPGKLEGLIEEIHGREGEKTACLIADGAAGWAIEVAEKMKLRRAVVVITSAATVALTFSI 148 (457)
Q Consensus 72 ~~~~~-~~~~~~-~~-~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 148 (457)
..... .....+ .. +...+...+.++.+.+++ .+||+||+|.+..++..+|+.+|||++.+...+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~-------- 140 (384)
T 2p6p_A 72 AIPSDPVAQARFTGRWFARMAASSLPRMLDFSRA---WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD-------- 140 (384)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC--------
T ss_pred ccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc---cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc--------
Confidence 00011 111111 11 112222334555555554 78999999988778889999999999987532210
Q ss_pred hhhhhccCCCCCCCCccccccccCCCCCCCccccccccccCCcchhhHHHHHHHHHHHhh-----hcCcEEEEcCccccc
Q 012744 149 PKLIEDGVINSNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNMRAT-----RAADFQLCNSTYELE 223 (457)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~s~~~le 223 (457)
... +. ......+.+..... ..++.+++++.+.++
T Consensus 141 -----------------------~~~--------~~----------~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 179 (384)
T 2p6p_A 141 -----------------------ADG--------IH----------PGADAELRPELSELGLERLPAPDLFIDICPPSLR 179 (384)
T ss_dssp -----------------------CTT--------TH----------HHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGS
T ss_pred -----------------------cch--------hh----------HHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHC
Confidence 000 00 00111111111111 126789999999888
Q ss_pred chhhccC-CceeeeCcccCCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCcccC-----CHHHHHHHHHHHhhc
Q 012744 224 GGAFSMI-PELLPIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTVL-----EQNQFQELALGLEIC 297 (457)
Q Consensus 224 ~~~~~~~-~~~~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~-----~~~~~~~~~~a~~~~ 297 (457)
.+ .+++ +++.+++. . .+.++.+|++..+++++||+++||.... +.+.+..+++++...
T Consensus 180 ~~-~~~~~~~~~~~~~-~--------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~ 243 (384)
T 2p6p_A 180 PA-NAAPARMMRHVAT-S--------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW 243 (384)
T ss_dssp CT-TSCCCEECCCCCC-C--------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT
T ss_pred CC-CCCCCCceEecCC-C--------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcC
Confidence 65 3433 23444431 1 0123447888755667999999998654 457788999999888
Q ss_pred CCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccceeeccCcchhhhhhhcCCceeccccccch
Q 012744 298 NRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQ 377 (457)
Q Consensus 298 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ 377 (457)
+.+++|++++. ..+.+ +..++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++|...||
T Consensus 244 ~~~~~~~~g~~--------~~~~l-~~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq 311 (384)
T 2p6p_A 244 DVELIVAAPDT--------VAEAL-RAEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVL 311 (384)
T ss_dssp TCEEEEECCHH--------HHHHH-HHHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHH
T ss_pred CcEEEEEeCCC--------CHHhh-CCCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccc
Confidence 99999987632 11111 235789999 99999999999998 99999999999999999999999999999
Q ss_pred hhhHHhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHH
Q 012744 378 FMNTTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQNFKARALKLKEKALSSVREGGSSNKAIQNFV 449 (457)
Q Consensus 378 ~~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~ 449 (457)
..||+++++ .|+|+.+.. +..+.++|.++|+++++|++++++++++++++++ ..+..+.++.+.
T Consensus 312 ~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~ 375 (384)
T 2p6p_A 312 EAPARRVAD-YGAAIALLP---GEDSTEAIADSCQELQAKDTYARRAQDLSREISG----MPLPATVVTALE 375 (384)
T ss_dssp HHHHHHHHH-HTSEEECCT---TCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHT----SCCHHHHHHHHH
T ss_pred hHHHHHHHH-CCCeEecCc---CCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh----CCCHHHHHHHHH
Confidence 999999999 599999864 5679999999999999999999999999999987 345544444443
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=1.4e-37 Score=300.97 Aligned_cols=341 Identities=13% Similarity=0.133 Sum_probs=226.2
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCC------------
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGME------------ 70 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 70 (457)
+|||+|++.++.||++|+++|+++|.++||+|++++++.+.+.+... |+.+..++....
T Consensus 15 ~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 85 (398)
T 4fzr_A 15 HMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA---------GLPFAPTCPSLDMPEVLSWDREGN 85 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT---------TCCEEEEESSCCHHHHHSBCTTSC
T ss_pred ceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC---------CCeeEecCCccchHhhhhhhccCc
Confidence 68999999999999999999999999999999999998888777766 777777753110
Q ss_pred -CCC--Ccch-HHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHcCCceEEEechhhHHHHHHh
Q 012744 71 -PWD--DRSD-MRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAGWAIEVAEKMKLRRAVVVITSAATVALTF 146 (457)
Q Consensus 71 -~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 146 (457)
... .... .......+.......+.++.+.+++ .+||+||+|....++..+|+.+|||++.+...........
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~- 161 (398)
T 4fzr_A 86 RTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER---WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIK- 161 (398)
T ss_dssp BCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHH-
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhh-
Confidence 000 0001 1111122222222334445555554 8999999998777899999999999998764432100000
Q ss_pred hhhhhhhccCCCCCCCCccccccccCCCCCCCccccccccccCCcchhhHHHHHHHHHHHh-----hhcCcEEEEcCccc
Q 012744 147 SIPKLIEDGVINSNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNMRA-----TRAADFQLCNSTYE 221 (457)
Q Consensus 147 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~s~~~ 221 (457)
......+...... ....+..+....+.
T Consensus 162 ------------------------------------------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (398)
T 4fzr_A 162 ------------------------------------------------SAGVGELAPELAELGLTDFPDPLLSIDVCPPS 193 (398)
T ss_dssp ------------------------------------------------HHHHHHTHHHHHTTTCSSCCCCSEEEECSCGG
T ss_pred ------------------------------------------------HHHHHHHHHHHHHcCCCCCCCCCeEEEeCChh
Confidence 0000011111111 12234556565555
Q ss_pred ccchhhccCCceeeeCcccCCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCcccC--------CHHHHHHHHHH
Q 012744 222 LEGGAFSMIPELLPIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTVL--------EQNQFQELALG 293 (457)
Q Consensus 222 le~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~--------~~~~~~~~~~a 293 (457)
++.+.......+.++++.. ...++..|+....++++||+++||.... ..+.+..++++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~a 259 (398)
T 4fzr_A 194 MEAQPKPGTTKMRYVPYNG--------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQE 259 (398)
T ss_dssp GC----CCCEECCCCCCCC--------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHH
T ss_pred hCCCCCCCCCCeeeeCCCC--------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHH
Confidence 5543111111122332110 1122346777666678999999998543 34568899999
Q ss_pred HhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccceeeccCcchhhhhhhcCCceecccc
Q 012744 294 LEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPF 373 (457)
Q Consensus 294 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~ 373 (457)
+...+.+++|+.++. ....+ +..++|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|.
T Consensus 260 l~~~~~~~v~~~~~~----~~~~l-----~~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~ 328 (398)
T 4fzr_A 260 LPKLGFEVVVAVSDK----LAQTL-----QPLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPV 328 (398)
T ss_dssp GGGGTCEEEECCCC-----------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCC
T ss_pred HHhCCCEEEEEeCCc----chhhh-----ccCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCC
Confidence 988899999988754 11111 134688999999999999999999 9999999999999999999999999
Q ss_pred ccchhhhHHhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Q 012744 374 FADQFMNTTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQNFKARALKLKEKALS 433 (457)
Q Consensus 374 ~~DQ~~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~ 433 (457)
..||..|+.++++ .|+|+.+.. +.++.++|.++|.++++|+++++++++.++++.+
T Consensus 329 ~~~q~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 329 IAEVWDSARLLHA-AGAGVEVPW---EQAGVESVLAACARIRDDSSYVGNARRLAAEMAT 384 (398)
T ss_dssp SGGGHHHHHHHHH-TTSEEECC----------CHHHHHHHHHHCTHHHHHHHHHHHHHTT
T ss_pred chhHHHHHHHHHH-cCCEEecCc---ccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHc
Confidence 9999999999999 599999874 5678999999999999999999999999999886
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=4.6e-37 Score=297.35 Aligned_cols=350 Identities=13% Similarity=0.181 Sum_probs=236.8
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCC------------
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGME------------ 70 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 70 (457)
.|||+|++.++.||++|+++||++|.++||+|+++++ .+.+.+... |+.+..++....
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~---------G~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA---------GLEVVDVAPDYSAVKVFEQVAKDN 89 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT---------TCEEEESSTTCCHHHHHHHHHHHC
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC---------CCeeEecCCccCHHHHhhhcccCC
Confidence 4899999999999999999999999999999999999 777777665 899998874311
Q ss_pred ----------CCCCcchHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHcCCceEEEechhhH
Q 012744 71 ----------PWDDRSDMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAGWAIEVAEKMKLRRAVVVITSAA 140 (457)
Q Consensus 71 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 140 (457)
...........+.... ...+.++.+.+++ .+||+||+|....++..+|+.+|||++.+......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~l~~---~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~ 163 (398)
T 3oti_A 90 PRFAETVATRPAIDLEEWGVQIAAVN---RPLVDGTMALVDD---YRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWR 163 (398)
T ss_dssp HHHHHTGGGSCCCSGGGGHHHHHHHH---GGGHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCC
T ss_pred ccccccccCChhhhHHHHHHHHHHHH---HHHHHHHHHHHHH---cCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCC
Confidence 0111111222222222 2334444444444 89999999988888999999999999986533210
Q ss_pred HHHHHhhhhhhhhccCCCCCCCCccccccccCCCCCCCccccccccccCCcchhhHHHHHHHHHHHhhhcCcEEEEcCcc
Q 012744 141 TVALTFSIPKLIEDGVINSNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNMRATRAADFQLCNSTY 220 (457)
Q Consensus 141 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~ 220 (457)
.. . .. ... ...+...+.+........+..+....+
T Consensus 164 ~~-------------------------------~--------~~-~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~ 198 (398)
T 3oti_A 164 TR-------------------------------G--------MH-RSI-----ASFLTDLMDKHQVSLPEPVATIESFPP 198 (398)
T ss_dssp CT-------------------------------T--------HH-HHH-----HTTCHHHHHHTTCCCCCCSEEECSSCG
T ss_pred cc-------------------------------c--------hh-hHH-----HHHHHHHHHHcCCCCCCCCeEEEeCCH
Confidence 00 0 00 000 000000000000001223455555555
Q ss_pred cccchhhccCCceeeeCcccCCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCcccC--CHHHHHHHHHHHhhcC
Q 012744 221 ELEGGAFSMIPELLPIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTVL--EQNQFQELALGLEICN 298 (457)
Q Consensus 221 ~le~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~--~~~~~~~~~~a~~~~~ 298 (457)
.+..+.......+.++ |. .....+..|+....++++||+++||.... ..+.+..+++++...+
T Consensus 199 ~~~~~~~~~~~~~~~~-~~--------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~ 263 (398)
T 3oti_A 199 SLLLEAEPEGWFMRWV-PY--------------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVD 263 (398)
T ss_dssp GGGTTSCCCSBCCCCC-CC--------------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSS
T ss_pred HHCCCCCCCCCCcccc-CC--------------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCC
Confidence 5443310111111121 10 01112235666556678999999998542 6677889999998889
Q ss_pred CcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccceeeccCcchhhhhhhcCCceeccccccchh
Q 012744 299 RSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQF 378 (457)
Q Consensus 299 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~ 378 (457)
.+++|+.++. ....+. ..++|+.+.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...||.
T Consensus 264 ~~~v~~~g~~----~~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~ 332 (398)
T 3oti_A 264 ADFVLALGDL----DISPLG-----TLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQF 332 (398)
T ss_dssp SEEEEECTTS----CCGGGC-----SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCS
T ss_pred CEEEEEECCc----Chhhhc-----cCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhH
Confidence 9999998764 111111 23678999999999999999999 999999999999999999999999999999
Q ss_pred hhH--HhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH
Q 012744 379 MNT--TYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQNFKARALKLKEKALSSVREGGSSNKAIQNFVQSI 452 (457)
Q Consensus 379 ~na--~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 452 (457)
.|| .++++ .|+|+.+.. .+.+.+.|. ++++|++++++++++++++.+ ..+. ..+.+.+.++
T Consensus 333 ~~a~~~~~~~-~g~g~~~~~---~~~~~~~l~----~ll~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~l~~l 395 (398)
T 3oti_A 333 QHTAREAVSR-RGIGLVSTS---DKVDADLLR----RLIGDESLRTAAREVREEMVA----LPTP-AETVRRIVER 395 (398)
T ss_dssp SCTTHHHHHH-HTSEEECCG---GGCCHHHHH----HHHHCHHHHHHHHHHHHHHHT----SCCH-HHHHHHHHHH
T ss_pred HHHHHHHHHH-CCCEEeeCC---CCCCHHHHH----HHHcCHHHHHHHHHHHHHHHh----CCCH-HHHHHHHHHH
Confidence 999 99999 599999974 456777776 888999999999999999986 3444 4444444444
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=5e-36 Score=289.49 Aligned_cols=357 Identities=14% Similarity=0.180 Sum_probs=241.6
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEec-CCCCCCC---------
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSI-PDGMEPW--------- 72 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------- 72 (457)
+|||+|++.++.||++|++.|+++|.++||+|++++++...+.+... |+.+..+ +......
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA---------GLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB---------TCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC---------CCceeeecCCccchhhhhhhcccc
Confidence 58999999999999999999999999999999999998777777665 7888777 3211000
Q ss_pred -C------CcchHHHHHHHHHHhc----chHHHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHcCCceEEEechhhHH
Q 012744 73 -D------DRSDMRKLLEKRLQVM----PGKLEGLIEEIHGREGEKTACLIADGAAGWAIEVAEKMKLRRAVVVITSAAT 141 (457)
Q Consensus 73 -~------~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~ 141 (457)
. ........+......+ ...+.++.+.+++ .+||+||+|.....+..+|+.+|||++.+.......
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~ 148 (391)
T 3tsa_A 72 PNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA---WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT 148 (391)
T ss_dssp CCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT
T ss_pred cccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh---cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc
Confidence 0 0011111111111111 1114445555554 899999999877788889999999999975332110
Q ss_pred HHHHhhhhhhhhccCCCCCCCCccccccccCCCCCCCccccccccccCCcchhhHHHHHHHHHHHhh-----hcCcEEEE
Q 012744 142 VALTFSIPKLIEDGVINSNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNMRAT-----RAADFQLC 216 (457)
Q Consensus 142 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~ 216 (457)
. . ........++.+....+ ...+.++.
T Consensus 149 ~-------------------------------------------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (391)
T 3tsa_A 149 A-------------------------------------------G-----PFSDRAHELLDPVCRHHGLTGLPTPELILD 180 (391)
T ss_dssp T-------------------------------------------T-----HHHHHHHHHHHHHHHHTTSSSSCCCSEEEE
T ss_pred c-------------------------------------------c-----cccchHHHHHHHHHHHcCCCCCCCCceEEE
Confidence 0 0 00001111121111111 22366777
Q ss_pred cCcccccchhhccCCceeeeCcccCCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCccc--CC-HHHHHHHHHH
Q 012744 217 NSTYELEGGAFSMIPELLPIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTV--LE-QNQFQELALG 293 (457)
Q Consensus 217 ~s~~~le~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~--~~-~~~~~~~~~a 293 (457)
...++++.+.......+.++ |.. ....+..|+....++++|++++||... .. .+.+..++++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~-p~~--------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~ 245 (391)
T 3tsa_A 181 PCPPSLQASDAPQGAPVQYV-PYN--------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA 245 (391)
T ss_dssp CSCGGGSCTTSCCCEECCCC-CCC--------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH
T ss_pred ecChhhcCCCCCccCCeeee-cCC--------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh
Confidence 77777665421111223333 111 112233577666677899999999843 33 6778888888
Q ss_pred Hhhc-CCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccceeeccCcchhhhhhhcCCceeccc
Q 012744 294 LEIC-NRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWP 372 (457)
Q Consensus 294 ~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P 372 (457)
.+. +.+++|+.++. ..+.+. ..++|+.+.+|+|+.++|++|++ ||||||.||+.||+++|+|+|++|
T Consensus 246 -~~~p~~~~v~~~~~~----~~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p 313 (391)
T 3tsa_A 246 -TELPGVEAVIAVPPE----HRALLT-----DLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLP 313 (391)
T ss_dssp -HTSTTEEEEEECCGG----GGGGCT-----TCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECC
T ss_pred -ccCCCeEEEEEECCc----chhhcc-----cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecC
Confidence 777 77888887653 111121 23678999999999999999999 999999999999999999999999
Q ss_pred cccchhhhHHhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH
Q 012744 373 FFADQFMNTTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQNFKARALKLKEKALSSVREGGSSNKAIQNFVQSI 452 (457)
Q Consensus 373 ~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 452 (457)
...||..|+.++++ .|+|..+..+ ....+.+.|.++|.++++|++++++++++++++.+ ..+..+ +.+.+.++
T Consensus 314 ~~~~q~~~a~~~~~-~g~g~~~~~~-~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~i~~~ 386 (391)
T 3tsa_A 314 QYFDQFDYARNLAA-AGAGICLPDE-QAQSDHEQFTDSIATVLGDTGFAAAAIKLSDEITA----MPHPAA-LVRTLENT 386 (391)
T ss_dssp CSTTHHHHHHHHHH-TTSEEECCSH-HHHTCHHHHHHHHHHHHTCTHHHHHHHHHHHHHHT----SCCHHH-HHHHHHHC
T ss_pred CcccHHHHHHHHHH-cCCEEecCcc-cccCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHc----CCCHHH-HHHHHHHH
Confidence 99999999999999 5999998520 03478999999999999999999999999999876 444444 44444444
Q ss_pred h
Q 012744 453 K 453 (457)
Q Consensus 453 ~ 453 (457)
.
T Consensus 387 ~ 387 (391)
T 3tsa_A 387 A 387 (391)
T ss_dssp -
T ss_pred H
Confidence 3
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=4.1e-33 Score=271.02 Aligned_cols=357 Identities=16% Similarity=0.173 Sum_probs=242.9
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCC--------------
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDG-------------- 68 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 68 (457)
+|||+|++.++.||++|+++||++|+++||+|++++++...+.+... |+.+..++..
T Consensus 20 ~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~~~~~~~~~~ 90 (412)
T 3otg_A 20 HMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL---------GFEPVATGMPVFDGFLAALRIRFD 90 (412)
T ss_dssp SCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT---------TCEEEECCCCHHHHHHHHHHHHHS
T ss_pred eeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhc---------CCceeecCcccccchhhhhhhhhc
Confidence 68999999999999999999999999999999999998776666655 8999888741
Q ss_pred ---CCCCCCcchHHHHHHHHHHh-cchHHHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHcCCceEEEechhhHHHHH
Q 012744 69 ---MEPWDDRSDMRKLLEKRLQV-MPGKLEGLIEEIHGREGEKTACLIADGAAGWAIEVAEKMKLRRAVVVITSAATVAL 144 (457)
Q Consensus 69 ---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~ 144 (457)
.+..............+... ....+..+.+.+++ .+||+||+|....++..+|+.+|||++.+.........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~- 166 (412)
T 3otg_A 91 TDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER---LRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTPDD- 166 (412)
T ss_dssp CSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCCSH-
T ss_pred ccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh---cCCCEEEECchhhHHHHHHHHcCCCEEEecccccCchh-
Confidence 00000000000111111111 11122344444444 79999999987778888999999999986433210000
Q ss_pred HhhhhhhhhccCCCCCCCCccccccccCCCCCCCccccccccccCCcchhhHHHHHHHHHHHh----------hhcCcEE
Q 012744 145 TFSIPKLIEDGVINSNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNMRA----------TRAADFQ 214 (457)
Q Consensus 145 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 214 (457)
........+.+.... ...++.+
T Consensus 167 ------------------------------------------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~ 198 (412)
T 3otg_A 167 ------------------------------------------------LTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPF 198 (412)
T ss_dssp ------------------------------------------------HHHHHHHHHHHHHHHTTCCCCSSCCGGGGCCE
T ss_pred ------------------------------------------------hhHHHHHHHHHHHHHcCCCCCcccccCCCCeE
Confidence 000011111111111 1345677
Q ss_pred EEcCcccccchhhccCCceeeeCcccCCCCCCCCCCCCCCCcchhhHH-hccCCCCeEEEEEeCCcccCCHHHHHHHHHH
Q 012744 215 LCNSTYELEGGAFSMIPELLPIGPLLASNRLGNSAGYFLPEDSKCLEW-LDQRQANSVIYVAFGSHTVLEQNQFQELALG 293 (457)
Q Consensus 215 l~~s~~~le~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a 293 (457)
++.+...++............+-+. .. .....+.+| ....+++++|++++||......+.+..++++
T Consensus 199 i~~~~~~~~~~~~~~~~~~~~~~~~---~~---------~~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~ 266 (412)
T 3otg_A 199 IDIFPPSLQEPEFRARPRRHELRPV---PF---------AEQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDG 266 (412)
T ss_dssp EECSCGGGSCHHHHTCTTEEECCCC---CC---------CCCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHH
T ss_pred EeeCCHHhcCCcccCCCCcceeecc---CC---------CCCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHH
Confidence 7777777665422111111111111 10 011122345 3333456799999999875667889999999
Q ss_pred HhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccceeeccCcchhhhhhhcCCceecccc
Q 012744 294 LEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPF 373 (457)
Q Consensus 294 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~ 373 (457)
+.+.+.+++|+.++... .+.+. ..++|+.+.+|+|+.++|+++++ ||+|||+||+.||+++|+|+|++|.
T Consensus 267 l~~~~~~~~~~~g~~~~---~~~l~-----~~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~ 336 (412)
T 3otg_A 267 LAGLDADVLVASGPSLD---VSGLG-----EVPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPW 336 (412)
T ss_dssp HHTSSSEEEEECCSSCC---CTTCC-----CCCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCC
T ss_pred HHcCCCEEEEEECCCCC---hhhhc-----cCCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCC
Confidence 98889999998876510 11121 13578999999999999999999 9999999999999999999999999
Q ss_pred ccchhhhHHhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHH
Q 012744 374 FADQFMNTTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQNFKARALKLKEKALSSVREGGSSNKAIQNFVQ 450 (457)
Q Consensus 374 ~~DQ~~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 450 (457)
..||..|+..+++ .|+|..+.. +..++++|.++|.++++|+++++++.+.++++.+ ..+..+.++.+.+
T Consensus 337 ~~~q~~~~~~v~~-~g~g~~~~~---~~~~~~~l~~ai~~ll~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 405 (412)
T 3otg_A 337 AGDSFANAQAVAQ-AGAGDHLLP---DNISPDSVSGAAKRLLAEESYRAGARAVAAEIAA----MPGPDEVVRLLPG 405 (412)
T ss_dssp STTHHHHHHHHHH-HTSEEECCG---GGCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH----SCCHHHHHTTHHH
T ss_pred chhHHHHHHHHHH-cCCEEecCc---ccCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhc----CCCHHHHHHHHHH
Confidence 9999999999999 499999974 5679999999999999999999999999998876 3454444444433
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=1.6e-28 Score=233.49 Aligned_cols=334 Identities=13% Similarity=0.113 Sum_probs=205.7
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcch--hHHHhhhcCCCCCCCCeEEEecCCC-CCCCCCc--
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNH--KRVLESLEGKNYIGEQIHLVSIPDG-MEPWDDR-- 75 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-- 75 (457)
|+ .||+|...|+.||++|.++||++|.++||+|+|+++.... +.+.+. |+.++.++.. +......
T Consensus 1 M~-~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~---------g~~~~~i~~~~~~~~~~~~~ 70 (365)
T 3s2u_A 1 MK-GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKA---------GLPLHLIQVSGLRGKGLKSL 70 (365)
T ss_dssp ---CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGG---------TCCEEECC------------
T ss_pred CC-CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhc---------CCcEEEEECCCcCCCCHHHH
Confidence 44 5799988888899999999999999999999999987643 233333 7888887632 2211111
Q ss_pred -chHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc--hHHHHHHHcCCceEEEechhhHHHHHHhhhhhhh
Q 012744 76 -SDMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG--WAIEVAEKMKLRRAVVVITSAATVALTFSIPKLI 152 (457)
Q Consensus 76 -~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 152 (457)
..+..++..+ .....+++. .+||+||++..+. .+..+|+.+|||++..-..
T Consensus 71 ~~~~~~~~~~~-----~~~~~~l~~------~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n--------------- 124 (365)
T 3s2u_A 71 VKAPLELLKSL-----FQALRVIRQ------LRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQN--------------- 124 (365)
T ss_dssp --CHHHHHHHH-----HHHHHHHHH------HCCSEEEECSSSTHHHHHHHHHHTTCCEEEEECS---------------
T ss_pred HHHHHHHHHHH-----HHHHHHHHh------cCCCEEEEcCCcchHHHHHHHHHcCCCEEEEecc---------------
Confidence 1111211111 123344444 8999999997665 4566789999999873110
Q ss_pred hccCCCCCCCCccccccccCCCCCCCccccccccccCCcchhhHHHHHHHHHHHhhhcCcEEEEcCcccccchhhccCCc
Q 012744 153 EDGVINSNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNMRATRAADFQLCNSTYELEGGAFSMIPE 232 (457)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~ 232 (457)
.+|+.. + ++ ..+.++.++...... .+..++
T Consensus 125 ------------------~~~G~~-----------------n----r~------l~~~a~~v~~~~~~~-----~~~~~k 154 (365)
T 3s2u_A 125 ------------------AVAGTA-----------------N----RS------LAPIARRVCEAFPDT-----FPASDK 154 (365)
T ss_dssp ------------------SSCCHH-----------------H----HH------HGGGCSEEEESSTTS-----SCC---
T ss_pred ------------------hhhhhH-----------------H----Hh------hccccceeeeccccc-----ccCcCc
Confidence 011100 0 00 012344444433222 122346
Q ss_pred eeeeCcccCCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhc----CCcEEEEEcCC
Q 012744 233 LLPIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTVLEQNQFQELALGLEIC----NRSFLWVVRPD 308 (457)
Q Consensus 233 ~~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~----~~~~i~~~~~~ 308 (457)
..++|........... . ......+++++|++..||.+.. ...+.+.+++... +..+++.++..
T Consensus 155 ~~~~g~pvr~~~~~~~-------~----~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~ 221 (365)
T 3s2u_A 155 RLTTGNPVRGELFLDA-------H----ARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQ 221 (365)
T ss_dssp CEECCCCCCGGGCCCT-------T----SSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTT
T ss_pred EEEECCCCchhhccch-------h----hhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCcc
Confidence 7778866554332100 0 0111223456899988987543 2333455555443 34566666533
Q ss_pred CCCCCcCCCchhHH---HHhcCCceeecCCCch-hhccCCCccceeeccCcchhhhhhhcCCceeccccc----cchhhh
Q 012744 309 ITNDANDAYPEGFR---ERVAARGQMISWSPQQ-KVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFF----ADQFMN 380 (457)
Q Consensus 309 ~~~~~~~~~~~~~~---~~~~~nv~~~~~~pq~-~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~----~DQ~~n 380 (457)
..+... ...+.++.+.+|+++. ++|+.+|+ +|||+|.+|+.|++++|+|+|.+|+. .+|..|
T Consensus 222 --------~~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~N 291 (365)
T 3s2u_A 222 --------HAEITAERYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRN 291 (365)
T ss_dssp --------THHHHHHHHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHH
T ss_pred --------ccccccceecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHH
Confidence 112222 2346788899999985 79999999 99999999999999999999999874 589999
Q ss_pred HHhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH
Q 012744 381 TTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQNFKARALKLKEKALSSVREGGSSNKAIQNFVQSI 452 (457)
Q Consensus 381 a~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 452 (457)
|+.+++ .|+|..+.. ..+++++|.++|.++++|++.++ +|++..++.. . ..+.+.+.+.+.++
T Consensus 292 A~~l~~-~G~a~~l~~---~~~~~~~L~~~i~~ll~d~~~~~---~m~~~a~~~~-~-~~aa~~ia~~i~~l 354 (365)
T 3s2u_A 292 AEFLVR-SGAGRLLPQ---KSTGAAELAAQLSEVLMHPETLR---SMADQARSLA-K-PEATRTVVDACLEV 354 (365)
T ss_dssp HHHHHT-TTSEEECCT---TTCCHHHHHHHHHHHHHCTHHHH---HHHHHHHHTC-C-TTHHHHHHHHHHHH
T ss_pred HHHHHH-CCCEEEeec---CCCCHHHHHHHHHHHHCCHHHHH---HHHHHHHhcC-C-ccHHHHHHHHHHHH
Confidence 999999 599999973 67899999999999999986544 4445544321 1 23344455555444
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=1.3e-27 Score=202.28 Aligned_cols=163 Identities=22% Similarity=0.442 Sum_probs=138.3
Q ss_pred CCcchhhHHhccCCCCeEEEEEeCCcc-cCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceee
Q 012744 254 PEDSKCLEWLDQRQANSVIYVAFGSHT-VLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMI 332 (457)
Q Consensus 254 ~~~~~l~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~ 332 (457)
+.+.++.+|++..+++++||+++||.. ....+.+..+++++...+.+++|+.++. .++. .++|+.+.
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~--------~~~~----~~~~v~~~ 73 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGN--------KPDT----LGLNTRLY 73 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSS--------CCTT----CCTTEEEE
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCc--------Cccc----CCCcEEEe
Confidence 567889999998777789999999985 4567888999999988899999998754 1111 35689999
Q ss_pred cCCCchhhccCCCccceeeccCcchhhhhhhcCCceeccccccchhhhHHhhhhhhceeEEeeccCCCccCHHHHHHHHH
Q 012744 333 SWSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLRLERNQSGIIGREEIKNKVD 412 (457)
Q Consensus 333 ~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~ 412 (457)
+|+||.++|.|+.+++||||||+||++|++++|+|+|++|...||..||+++++ .|+|+.+.. ..++.++|.++|.
T Consensus 74 ~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~ 149 (170)
T 2o6l_A 74 KWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDF---NTMSSTDLLNALK 149 (170)
T ss_dssp SSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCT---TTCCHHHHHHHHH
T ss_pred cCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEecc---ccCCHHHHHHHHH
Confidence 999999999555555599999999999999999999999999999999999999 599999874 5689999999999
Q ss_pred HHhCCHHHHHHHHHHHHHHH
Q 012744 413 QVLGDQNFKARALKLKEKAL 432 (457)
Q Consensus 413 ~~l~~~~~~~~a~~l~~~~~ 432 (457)
++++|++|+++++++++.++
T Consensus 150 ~ll~~~~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 150 RVINDPSYKENVMKLSRIQH 169 (170)
T ss_dssp HHHHCHHHHHHHHHHC----
T ss_pred HHHcCHHHHHHHHHHHHHhh
Confidence 99999999999999999876
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.88 E-value=9.5e-21 Score=180.58 Aligned_cols=338 Identities=12% Similarity=0.123 Sum_probs=204.1
Q ss_pred CCC--CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcch--hHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcc
Q 012744 1 MSS--PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNH--KRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRS 76 (457)
Q Consensus 1 m~~--~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (457)
|++ |||++++.+..||..++..|+++|.++||+|++++..... +.+... ++.+..++.......
T Consensus 2 M~~m~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~~--- 69 (364)
T 1f0k_A 2 MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKH---------GIEIDFIRISGLRGK--- 69 (364)
T ss_dssp -----CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGG---------TCEEEECCCCCCTTC---
T ss_pred CCCCCcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhcccc---------CCceEEecCCccCcC---
Confidence 455 7999999887799999999999999999999999976542 222222 777777653211111
Q ss_pred hHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCc--chHHHHHHHcCCceEEEechhhHHHHHHhhhhhhhhc
Q 012744 77 DMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAA--GWAIEVAEKMKLRRAVVVITSAATVALTFSIPKLIED 154 (457)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~ 154 (457)
.....+...... ...+..+.+.+++ .+||+|+++... ..+..+++.+|+|++.......
T Consensus 70 ~~~~~~~~~~~~-~~~~~~l~~~l~~---~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~--------------- 130 (364)
T 1f0k_A 70 GIKALIAAPLRI-FNAWRQARAIMKA---YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI--------------- 130 (364)
T ss_dssp CHHHHHTCHHHH-HHHHHHHHHHHHH---HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS---------------
T ss_pred ccHHHHHHHHHH-HHHHHHHHHHHHh---cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC---------------
Confidence 111111000000 0122333333333 799999998643 2456778889999986321100
Q ss_pred cCCCCCCCCccccccccCCCCCCCccccccccccCCcchhhHHHHHHHHHHHhhhcCcEEEEcCcccccchhhccCCcee
Q 012744 155 GVINSNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNMRATRAADFQLCNSTYELEGGAFSMIPELL 234 (457)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~ 234 (457)
+ . ...++ ....++.+++.+... .+++.
T Consensus 131 ---------------------~---------~---------~~~~~------~~~~~d~v~~~~~~~--------~~~~~ 157 (364)
T 1f0k_A 131 ---------------------A---------G---------LTNKW------LAKIATKVMQAFPGA--------FPNAE 157 (364)
T ss_dssp ---------------------C---------C---------HHHHH------HTTTCSEEEESSTTS--------SSSCE
T ss_pred ---------------------C---------c---------HHHHH------HHHhCCEEEecChhh--------cCCce
Confidence 0 0 00000 123566777654332 12455
Q ss_pred eeCcccCCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhc--CCcEEEEEcCCCCCC
Q 012744 235 PIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTVLEQNQFQELALGLEIC--NRSFLWVVRPDITND 312 (457)
Q Consensus 235 ~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~--~~~~i~~~~~~~~~~ 312 (457)
.+|......... + +. ..+.+....++++|++..|+.. .......+++++... +.+++++++..
T Consensus 158 ~i~n~v~~~~~~-------~-~~-~~~~~~~~~~~~~il~~~g~~~--~~k~~~~li~a~~~l~~~~~~l~i~G~~---- 222 (364)
T 1f0k_A 158 VVGNPVRTDVLA-------L-PL-PQQRLAGREGPVRVLVVGGSQG--ARILNQTMPQVAAKLGDSVTIWHQSGKG---- 222 (364)
T ss_dssp ECCCCCCHHHHT-------S-CC-HHHHHTTCCSSEEEEEECTTTC--CHHHHHHHHHHHHHHGGGEEEEEECCTT----
T ss_pred EeCCccchhhcc-------c-ch-hhhhcccCCCCcEEEEEcCchH--hHHHHHHHHHHHHHhcCCcEEEEEcCCc----
Confidence 666433221110 0 00 1112222334567888778764 234445555666444 45656666644
Q ss_pred CcCCCchhHHHH---hc-CCceeecCCCc-hhhccCCCccceeeccCcchhhhhhhcCCceeccccc---cchhhhHHhh
Q 012744 313 ANDAYPEGFRER---VA-ARGQMISWSPQ-QKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFF---ADQFMNTTYI 384 (457)
Q Consensus 313 ~~~~~~~~~~~~---~~-~nv~~~~~~pq-~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~---~DQ~~na~~v 384 (457)
. .+.+.+. .. +||.+.+|+++ .+++..+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+..+
T Consensus 223 ~----~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~ 296 (364)
T 1f0k_A 223 S----QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPL 296 (364)
T ss_dssp C----HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHH
T ss_pred h----HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHH
Confidence 1 1233322 22 58999999955 589999999 99999999999999999999999987 7999999999
Q ss_pred hhhhceeEEeeccCCCccCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHh
Q 012744 385 CDVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQNFKARALKLKEKALSSVREGGSSNKAIQNFVQSIK 453 (457)
Q Consensus 385 ~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 453 (457)
.+. |.|..++. ++.+.++++++|.++ |++.+++..+-+.+.. +..+..+.++.+.+.+.
T Consensus 297 ~~~-g~g~~~~~---~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~y~ 355 (364)
T 1f0k_A 297 EKA-GAAKIIEQ---PQLSVDAVANTLAGW--SRETLLTMAERARAAS----IPDATERVANEVSRVAR 355 (364)
T ss_dssp HHT-TSEEECCG---GGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTC----CTTHHHHHHHHHHHHHT
T ss_pred HhC-CcEEEecc---ccCCHHHHHHHHHhc--CHHHHHHHHHHHHHhh----ccCHHHHHHHHHHHHHH
Confidence 984 99998864 456799999999998 7776665544443332 23444444444444443
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.74 E-value=6.6e-17 Score=145.81 Aligned_cols=116 Identities=8% Similarity=0.073 Sum_probs=89.7
Q ss_pred CCeEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHh--cCCceeecCCCch-hhccCC
Q 012744 268 ANSVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERV--AARGQMISWSPQQ-KVLTHP 344 (457)
Q Consensus 268 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~nv~~~~~~pq~-~ll~~~ 344 (457)
+.+.|+|++|... .......+++++.... ++.++.+.. ....+.+.+.. ..|+.+..|+++. ++|..+
T Consensus 156 ~~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~------~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~a 226 (282)
T 3hbm_A 156 KKYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSS------NPNLKKLQKFAKLHNNIRLFIDHENIAKLMNES 226 (282)
T ss_dssp CCEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTT------CTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTE
T ss_pred cCCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCC------chHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHC
Confidence 3568999999643 3346667888886544 566666644 22233333322 3588899999886 799999
Q ss_pred CccceeeccCcchhhhhhhcCCceeccccccchhhhHHhhhhhhceeEEeec
Q 012744 345 SISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLRLER 396 (457)
Q Consensus 345 ~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~g~~l~~ 396 (457)
++ +||+|| +|+.|+++.|+|+|++|...+|..||+.+++ .|++..+..
T Consensus 227 Dl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~-~G~~~~~~~ 274 (282)
T 3hbm_A 227 NK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAK-KGYEVEYKY 274 (282)
T ss_dssp EE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHH-TTCEEECGG
T ss_pred CE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH-CCCEEEcch
Confidence 99 999999 8999999999999999999999999999999 599998853
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.61 E-value=8.9e-16 Score=132.60 Aligned_cols=132 Identities=9% Similarity=0.048 Sum_probs=95.0
Q ss_pred CCCCeEEEEEeCCcccCCHHHHHHH-----HHHHhhcC-CcEEEEEcCCCCCCCcCCCchhHHHHh---------c----
Q 012744 266 RQANSVIYVAFGSHTVLEQNQFQEL-----ALGLEICN-RSFLWVVRPDITNDANDAYPEGFRERV---------A---- 326 (457)
Q Consensus 266 ~~~~~~v~vs~Gs~~~~~~~~~~~~-----~~a~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~---------~---- 326 (457)
..++++|||+.||...+ .+.+..+ ++++...+ .++++.++... . ...+.+.+.. +
T Consensus 25 ~~~~~~VlVtgGS~~~~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~----~-~~~~~~~~~~~~~~~~~l~p~~~~ 98 (224)
T 2jzc_A 25 IIEEKALFVTCGATVPF-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNY----S-SEFEHLVQERGGQRESQKIPIDQF 98 (224)
T ss_dssp CCCSCCEEEECCSCCSC-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSS----C-CCCCSHHHHHTCEECSCCCSSCTT
T ss_pred CCCCCEEEEEcCCchHH-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCc----h-hhHHHHHHhhhccccccccccccc
Confidence 34567999999997322 3333333 48887777 78888888651 1 0111111111 1
Q ss_pred -------------C--CceeecCCCch-hhcc-CCCccceeeccCcchhhhhhhcCCceeccccc----cchhhhHHhhh
Q 012744 327 -------------A--RGQMISWSPQQ-KVLT-HPSISCFMSHCGWNSTTEGVSNGVPFLCWPFF----ADQFMNTTYIC 385 (457)
Q Consensus 327 -------------~--nv~~~~~~pq~-~ll~-~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~~v~ 385 (457)
. ++.+.+|+++. ++|+ .+++ +|||||+||++|++++|+|+|++|.. .||..||++++
T Consensus 99 ~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~ 176 (224)
T 2jzc_A 99 GCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFV 176 (224)
T ss_dssp CTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHH
T ss_pred cccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHH
Confidence 2 33456888875 8999 9999 99999999999999999999999984 46999999999
Q ss_pred hhhceeEEeeccCCCccCHHHHHHHHHHH
Q 012744 386 DVWKVGLRLERNQSGIIGREEIKNKVDQV 414 (457)
Q Consensus 386 ~~lG~g~~l~~~~~~~~~~~~l~~~i~~~ 414 (457)
+ .|+|+.+ +.++|.++|.++
T Consensus 177 ~-~G~~~~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 177 E-LGYVWSC--------APTETGLIAGLR 196 (224)
T ss_dssp H-HSCCCEE--------CSCTTTHHHHHH
T ss_pred H-CCCEEEc--------CHHHHHHHHHHH
Confidence 9 5998654 456777788776
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.49 E-value=3.8e-11 Score=116.91 Aligned_cols=342 Identities=12% Similarity=0.059 Sum_probs=176.3
Q ss_pred CCEEEEEcC-----------CCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCC
Q 012744 3 SPHVVVIPN-----------PEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEP 71 (457)
Q Consensus 3 ~~~vl~~~~-----------~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (457)
.|||+|++. ...|+-..+..|++.|.++||+|++++........... ....+++++.++.....
T Consensus 20 mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~-----~~~~~v~v~~~~~~~~~ 94 (438)
T 3c48_A 20 HMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIV-----RVAENLRVINIAAGPYE 94 (438)
T ss_dssp CCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEE-----EEETTEEEEEECCSCSS
T ss_pred hheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccc-----cccCCeEEEEecCCCcc
Confidence 579999984 23588889999999999999999999875432111000 00136777777632211
Q ss_pred CCCcchHHHHHHHHHHhcchHHHHHHHH-HhcCCCCCeeEEEecCCcc--hHHHHHHHcCCceEEEechhhHHHHHHhhh
Q 012744 72 WDDRSDMRKLLEKRLQVMPGKLEGLIEE-IHGREGEKTACLIADGAAG--WAIEVAEKMKLRRAVVVITSAATVALTFSI 148 (457)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~D~vv~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 148 (457)
..........+..+ ...+++. ++.. .+||+|++..... .+..+++.+++|+|..........
T Consensus 95 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~--~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~------ 159 (438)
T 3c48_A 95 GLSKEELPTQLAAF-------TGGMLSFTRREK--VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK------ 159 (438)
T ss_dssp SCCGGGGGGGHHHH-------HHHHHHHHHHHT--CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH------
T ss_pred ccchhHHHHHHHHH-------HHHHHHHHHhcc--CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc------
Confidence 11111111111111 1122222 2221 2599999875332 344567788999988654332100
Q ss_pred hhhhhccCCCCCCCCccccccccCCCCCCCccccccccccCCcchhhHHHHHHHHHHHhhhcCcEEEEcCcccccchhh-
Q 012744 149 PKLIEDGVINSNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNMRATRAADFQLCNSTYELEGGAF- 227 (457)
Q Consensus 149 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~- 227 (457)
.. . +. . ...........+ ....+..++.+++.|....+.-..
T Consensus 160 -----~~---------------------~-----~~-~---~~~~~~~~~~~~--~~~~~~~~d~ii~~s~~~~~~~~~~ 202 (438)
T 3c48_A 160 -----NS---------------------Y-----RD-D---SDTPESEARRIC--EQQLVDNADVLAVNTQEEMQDLMHH 202 (438)
T ss_dssp -----SC---------------------C-------------CCHHHHHHHHH--HHHHHHHCSEEEESSHHHHHHHHHH
T ss_pred -----cc---------------------c-----cc-c---cCCcchHHHHHH--HHHHHhcCCEEEEcCHHHHHHHHHH
Confidence 00 0 00 0 000000011111 112346789999999776554311
Q ss_pred -ccC-CceeeeCcccCCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCccc-CCHHHHHHHHHHHhhc----CCc
Q 012744 228 -SMI-PELLPIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTV-LEQNQFQELALGLEIC----NRS 300 (457)
Q Consensus 228 -~~~-~~~~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~a~~~~----~~~ 300 (457)
..+ .++..|..-......... .......+.+-+.-..+ ..+++..|+... ...+.+...+..+.+. +.+
T Consensus 203 ~g~~~~k~~vi~ngvd~~~~~~~---~~~~~~~~r~~~~~~~~-~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~ 278 (438)
T 3c48_A 203 YDADPDRISVVSPGADVELYSPG---NDRATERSRRELGIPLH-TKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLR 278 (438)
T ss_dssp HCCCGGGEEECCCCCCTTTSCCC-------CHHHHHHTTCCSS-SEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEE
T ss_pred hCCChhheEEecCCccccccCCc---ccchhhhhHHhcCCCCC-CcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceE
Confidence 112 245555544332211100 00000112333322222 356777787642 2233333333333222 234
Q ss_pred EEEEEcCCCCCCCcCCCchhHHH---H--hcCCceeecCCCch---hhccCCCccceeecc----CcchhhhhhhcCCce
Q 012744 301 FLWVVRPDITNDANDAYPEGFRE---R--VAARGQMISWSPQQ---KVLTHPSISCFMSHC----GWNSTTEGVSNGVPF 368 (457)
Q Consensus 301 ~i~~~~~~~~~~~~~~~~~~~~~---~--~~~nv~~~~~~pq~---~ll~~~~~~~~I~Hg----G~~s~~eal~~GvP~ 368 (457)
++++ +..... ....+.+.+ + ..++|.+.+++|+. .++..+++ +|... ..+++.||+++|+|+
T Consensus 279 l~i~-G~~~~~---g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~Pv 352 (438)
T 3c48_A 279 VIIC-GGPSGP---NATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPV 352 (438)
T ss_dssp EEEE-CCBC---------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCE
T ss_pred EEEE-eCCCCC---CcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCE
Confidence 4443 321000 011222222 2 24689999999864 68999998 77653 346899999999999
Q ss_pred eccccccchhhhHHhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCCHHHH
Q 012744 369 LCWPFFADQFMNTTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQNFK 421 (457)
Q Consensus 369 l~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~ 421 (457)
|+.+. ......+.+. +.|..+.. -+.++++++|.++++|++.+
T Consensus 353 I~~~~----~~~~e~i~~~-~~g~~~~~-----~d~~~la~~i~~l~~~~~~~ 395 (438)
T 3c48_A 353 IAARV----GGLPIAVAEG-ETGLLVDG-----HSPHAWADALATLLDDDETR 395 (438)
T ss_dssp EEESC----TTHHHHSCBT-TTEEEESS-----CCHHHHHHHHHHHHHCHHHH
T ss_pred EecCC----CChhHHhhCC-CcEEECCC-----CCHHHHHHHHHHHHcCHHHH
Confidence 98754 3455566663 67887742 47899999999999998543
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.47 E-value=2.9e-11 Score=115.93 Aligned_cols=348 Identities=13% Similarity=0.040 Sum_probs=188.6
Q ss_pred CCCCEEEEEcC--C--CCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcc
Q 012744 1 MSSPHVVVIPN--P--EQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRS 76 (457)
Q Consensus 1 m~~~~vl~~~~--~--~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (457)
|++|||++++. + ..|.-..+..|++.| +||+|++++............ ...++.+..++......
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~---- 70 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD-----KTLDYEVIRWPRSVMLP---- 70 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH-----TTCSSEEEEESSSSCCS----
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc-----cccceEEEEcccccccc----
Confidence 55789999874 3 458888899999999 799999999876654211111 11377777776422111
Q ss_pred hHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc--hHHHHHHHcCCceEEEechhhHHHHHHhhhhhhhhc
Q 012744 77 DMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG--WAIEVAEKMKLRRAVVVITSAATVALTFSIPKLIED 154 (457)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~ 154 (457)
.. .....+.++++. .+||+|++..... ....+++.+|+|.+.+.......
T Consensus 71 ~~---------~~~~~l~~~~~~------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~------------- 122 (394)
T 3okp_A 71 TP---------TTAHAMAEIIRE------REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV------------- 122 (394)
T ss_dssp CH---------HHHHHHHHHHHH------TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHH-------------
T ss_pred ch---------hhHHHHHHHHHh------cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchh-------------
Confidence 00 111234455555 8999999865443 45566888999844432221100
Q ss_pred cCCCCCCCCccccccccCCCCCCCccccccccccCCcchhhHHHHHHHHHHHhhhcCcEEEEcCcccccchhhcc--CCc
Q 012744 155 GVINSNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNMRATRAADFQLCNSTYELEGGAFSM--IPE 232 (457)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~--~~~ 232 (457)
.+... ......+ ......++.+++.|....+.-.... ..+
T Consensus 123 -------------------------------~~~~~----~~~~~~~---~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~ 164 (394)
T 3okp_A 123 -------------------------------GWSML----PGSRQSL---RKIGTEVDVLTYISQYTLRRFKSAFGSHPT 164 (394)
T ss_dssp -------------------------------HHTTS----HHHHHHH---HHHHHHCSEEEESCHHHHHHHHHHHCSSSE
T ss_pred -------------------------------hhhhc----chhhHHH---HHHHHhCCEEEEcCHHHHHHHHHhcCCCCC
Confidence 00000 0001111 1123678899998877655432212 235
Q ss_pred eeeeCcccCCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCccc-CCHHHHHHHHHHHhhc--CCcEEEEEcCCC
Q 012744 233 LLPIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTV-LEQNQFQELALGLEIC--NRSFLWVVRPDI 309 (457)
Q Consensus 233 ~~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~a~~~~--~~~~i~~~~~~~ 309 (457)
+..|..-......... .......+.+-+.-.+ +..+++..|+... ...+.+...+..+... +.+++++..+.
T Consensus 165 ~~vi~ngv~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~- 239 (394)
T 3okp_A 165 FEHLPSGVDVKRFTPA---TPEDKSATRKKLGFTD-TTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGR- 239 (394)
T ss_dssp EEECCCCBCTTTSCCC---CHHHHHHHHHHTTCCT-TCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCT-
T ss_pred eEEecCCcCHHHcCCC---CchhhHHHHHhcCCCc-CceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCch-
Confidence 5556543332211100 0001122223332222 3356777787532 2233333333333222 45555544322
Q ss_pred CCCCcCCCchhHHH---HhcCCceeecCCCch---hhccCCCccceee-----------ccCcchhhhhhhcCCceeccc
Q 012744 310 TNDANDAYPEGFRE---RVAARGQMISWSPQQ---KVLTHPSISCFMS-----------HCGWNSTTEGVSNGVPFLCWP 372 (457)
Q Consensus 310 ~~~~~~~~~~~~~~---~~~~nv~~~~~~pq~---~ll~~~~~~~~I~-----------HgG~~s~~eal~~GvP~l~~P 372 (457)
..+.+.+ ...++|.+.+|+|+. +++..+++ +|. -|.-+++.||+++|+|+|+.+
T Consensus 240 -------~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~ 310 (394)
T 3okp_A 240 -------YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGT 310 (394)
T ss_dssp -------THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECS
T ss_pred -------HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeC
Confidence 2222222 235789999999865 48899998 776 455678999999999999976
Q ss_pred cccchhhhHHhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHhhhhcCCChHHHHHHHHHH
Q 012744 373 FFADQFMNTTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQNFKARALK-LKEKALSSVREGGSSNKAIQNFVQS 451 (457)
Q Consensus 373 ~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~-l~~~~~~~~~~~g~~~~~~~~~~~~ 451 (457)
.. .....+.+ |.|..+.. -+.++++++|.++++|++.+++..+ .++.+++ .-+.....+.+++-
T Consensus 311 ~~----~~~e~i~~--~~g~~~~~-----~d~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~----~~s~~~~~~~~~~~ 375 (394)
T 3okp_A 311 SG----GAPETVTP--ATGLVVEG-----SDVDKLSELLIELLDDPIRRAAMGAAGRAHVEA----EWSWEIMGERLTNI 375 (394)
T ss_dssp ST----TGGGGCCT--TTEEECCT-----TCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH----HTBHHHHHHHHHHH
T ss_pred CC----ChHHHHhc--CCceEeCC-----CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHH
Confidence 53 23334443 57776642 4799999999999999864433222 2222222 23444455555554
Q ss_pred Hhc
Q 012744 452 IKQ 454 (457)
Q Consensus 452 ~~~ 454 (457)
+.+
T Consensus 376 ~~~ 378 (394)
T 3okp_A 376 LQS 378 (394)
T ss_dssp HHS
T ss_pred HHH
Confidence 443
No 27
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.43 E-value=2e-12 Score=123.32 Aligned_cols=135 Identities=13% Similarity=0.120 Sum_probs=86.4
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHhhc-----CCcEEEEEcCCCCCCCcCCCchhHHHHh--cCCceeecCCCc---h
Q 012744 269 NSVIYVAFGSHTVLEQNQFQELALGLEIC-----NRSFLWVVRPDITNDANDAYPEGFRERV--AARGQMISWSPQ---Q 338 (457)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~nv~~~~~~pq---~ 338 (457)
++.|+++.|.....+ .+..+++++... +..+++..+.. ..+.+.+.+.. .++|.+.+++++ .
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~------~~~~~~l~~~~~~~~~v~~~g~~g~~~~~ 269 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLN------PVVREAVFPVLKGVRNFVLLDPLEYGSMA 269 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSC------HHHHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCC------HHHHHHHHHHhccCCCEEEECCCCHHHHH
Confidence 457777777543222 345556665432 44555444422 11112222222 257888866665 4
Q ss_pred hhccCCCccceeeccCcchhhhhhhcCCceeccccccchhhhHHhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCCH
Q 012744 339 KVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQ 418 (457)
Q Consensus 339 ~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~ 418 (457)
+++..+++ +|+++| |.+.||+++|+|+|+.+...++.. +.+. |.|+.+. .+.++|+++|.++++|+
T Consensus 270 ~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~-g~g~lv~------~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 270 ALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKA-GILKLAG------TDPEGVYRVVKGLLENP 335 (376)
T ss_dssp HHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHH-TSEEECC------SCHHHHHHHHHHHHTCH
T ss_pred HHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcC-CceEECC------CCHHHHHHHHHHHHhCh
Confidence 79999999 999884 446699999999999876666554 2343 8887763 38899999999999998
Q ss_pred HHHHHHH
Q 012744 419 NFKARAL 425 (457)
Q Consensus 419 ~~~~~a~ 425 (457)
+.+++..
T Consensus 336 ~~~~~~~ 342 (376)
T 1v4v_A 336 EELSRMR 342 (376)
T ss_dssp HHHHHHH
T ss_pred Hhhhhhc
Confidence 6554433
No 28
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.39 E-value=9.3e-12 Score=119.36 Aligned_cols=345 Identities=12% Similarity=0.070 Sum_probs=176.5
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhC--CCeEEEEeCCcc----hhHHHhhhcCCCCCCCCeEE-EecCCCCCCCC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKH--GLRITFVNSEYN----HKRVLESLEGKNYIGEQIHL-VSIPDGMEPWD 73 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~--Gh~Vt~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 73 (457)
|+++||++++ |+.....-+.+|.++|.++ |+++.++.+... ...+... ++.. +.+. + ..
T Consensus 25 m~~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~~---------~i~~~~~l~--v--~~ 90 (403)
T 3ot5_A 25 MAKIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEIF---------DIKPDIDLD--I--MK 90 (403)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHHT---------TCCCSEECC--C--CC
T ss_pred cccceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHhc---------CCCCCcccc--c--CC
Confidence 5556776665 6666677778999999987 688876665533 1222222 3311 1111 1 11
Q ss_pred CcchHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecC--Ccc-hHHHHHHHcCCceEEEechhhHHHHHHhhhhh
Q 012744 74 DRSDMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADG--AAG-WAIEVAEKMKLRRAVVVITSAATVALTFSIPK 150 (457)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~--~~~-~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~ 150 (457)
........ .......+.++++. .+||+|++-. ... .+..+|..+|||++.+.....
T Consensus 91 ~~~~~~~~----~~~~~~~l~~~l~~------~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~aglr----------- 149 (403)
T 3ot5_A 91 KGQTLAEI----TSRVMNGINEVIAA------ENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGLR----------- 149 (403)
T ss_dssp -CCCHHHH----HHHHHHHHHHHHHH------HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCC-----------
T ss_pred CCCCHHHH----HHHHHHHHHHHHHH------cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCcc-----------
Confidence 11122211 11122345566666 8999988732 222 456788999999876431110
Q ss_pred hhhccCCCCCCCCccccccccCCCCCCCccccccccccCCcchhhHHHHHHHHHHHhhhcCcEEEEcCcccccchhh-cc
Q 012744 151 LIEDGVINSNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNMRATRAADFQLCNSTYELEGGAF-SM 229 (457)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~-~~ 229 (457)
.+ ... ........+..+ ..-++.+++.+...-+.-.. ..
T Consensus 150 --------------------------s~-------~~~-~~~p~~~~r~~~------~~~a~~~~~~se~~~~~l~~~Gi 189 (403)
T 3ot5_A 150 --------------------------TW-------NKY-SPFPEEMNRQLT------GVMADIHFSPTKQAKENLLAEGK 189 (403)
T ss_dssp --------------------------CS-------CTT-SSTTHHHHHHHH------HHHCSEEEESSHHHHHHHHHTTC
T ss_pred --------------------------cc-------ccc-cCCcHHHHHHHH------HHhcCEEECCCHHHHHHHHHcCC
Confidence 00 000 000001111111 12356777776554332211 11
Q ss_pred -CCceeeeCcccCCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhh-----cCCcEEE
Q 012744 230 -IPELLPIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTVLEQNQFQELALGLEI-----CNRSFLW 303 (457)
Q Consensus 230 -~~~~~~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~-----~~~~~i~ 303 (457)
+.++..+|....+...... . .....+..+.+ .++++++++.|.....+. .+..+++++.. .+.++++
T Consensus 190 ~~~~i~vvGn~~~D~~~~~~-~--~~~~~~~~~~l---~~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~v~ 262 (403)
T 3ot5_A 190 DPATIFVTGNTAIDALKTTV-Q--KDYHHPILENL---GDNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTELVY 262 (403)
T ss_dssp CGGGEEECCCHHHHHHHHHS-C--TTCCCHHHHSC---TTCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEEEE
T ss_pred CcccEEEeCCchHHHHHhhh-h--hhcchHHHHhc---cCCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceEEE
Confidence 2368888854322110000 0 00111222222 345577777654222221 24555555533 2445655
Q ss_pred EEcCCCCCCCcCCCchhHHHH--hcCCceeecCCCc---hhhccCCCccceeeccCcchhhhhhhcCCceeccccccchh
Q 012744 304 VVRPDITNDANDAYPEGFRER--VAARGQMISWSPQ---QKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQF 378 (457)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~--~~~nv~~~~~~pq---~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~ 378 (457)
..+.. ..+.+.+.+. ..+++.+.+++++ ..++..+++ +|+-.|..+ .||.++|+|+|+.|-..++.
T Consensus 263 ~~~~~------~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~ 333 (403)
T 3ot5_A 263 PMHLN------PAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERP 333 (403)
T ss_dssp ECCSC------HHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCH
T ss_pred ecCCC------HHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcch
Confidence 54322 0011112211 2368889998874 368999998 998875322 69999999999997666654
Q ss_pred hhHHhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHH
Q 012744 379 MNTTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQNFKARALKLKEKALSSVREGGSSNKAIQNFVQS 451 (457)
Q Consensus 379 ~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~ 451 (457)
. +.+. |.|+.+. .+.++|.+++.++++|++.+++.. +.... ...++++.+-++.+.+.
T Consensus 334 e----~v~~-g~~~lv~------~d~~~l~~ai~~ll~~~~~~~~m~---~~~~~-~g~~~aa~rI~~~l~~~ 391 (403)
T 3ot5_A 334 E----GIEA-GTLKLIG------TNKENLIKEALDLLDNKESHDKMA---QAANP-YGDGFAANRILAAIKSH 391 (403)
T ss_dssp H----HHHH-TSEEECC------SCHHHHHHHHHHHHHCHHHHHHHH---HSCCT-TCCSCHHHHHHHHHHHH
T ss_pred h----heeC-CcEEEcC------CCHHHHHHHHHHHHcCHHHHHHHH---hhcCc-ccCCcHHHHHHHHHHHH
Confidence 3 2353 8877663 289999999999999987655433 32222 22345554444444433
No 29
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.38 E-value=1.2e-11 Score=118.17 Aligned_cols=134 Identities=15% Similarity=0.135 Sum_probs=86.2
Q ss_pred CCeEEEEEeCCcccCCHHHHHHHHHHHhhc-----CCcEEEEEcCCCCCCCcCCCchhHHHHh--cCCceeecCCCc---
Q 012744 268 ANSVIYVAFGSHTVLEQNQFQELALGLEIC-----NRSFLWVVRPDITNDANDAYPEGFRERV--AARGQMISWSPQ--- 337 (457)
Q Consensus 268 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~nv~~~~~~pq--- 337 (457)
++++++++.|...... +.+..+++++... +.++++..+.. ..+.+.+.+.. .++|.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~------~~~~~~l~~~~~~~~~v~~~g~~~~~~~ 276 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLN------PNVREPVNRILGHVKNVILIDPQEYLPF 276 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBC------HHHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCC------HHHHHHHHHHhhcCCCEEEeCCCCHHHH
Confidence 3567888888654322 2344555555332 34555533321 00112222222 268888777765
Q ss_pred hhhccCCCccceeeccCcchhhhhhhcCCceeccccccchhhhHHhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCC
Q 012744 338 QKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGD 417 (457)
Q Consensus 338 ~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~ 417 (457)
.+++..+++ +|+.+|. ++.||+++|+|+|+.+...+.. .+.+. |.|+.++ . +.++|+++|.++++|
T Consensus 277 ~~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~----e~v~~-g~g~lv~----~--d~~~la~~i~~ll~d 342 (384)
T 1vgv_A 277 VWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTERP----EAVTA-GTVRLVG----T--DKQRIVEEVTRLLKD 342 (384)
T ss_dssp HHHHHHCSE--EEESSST-GGGTGGGGTCCEEEESSCCSCH----HHHHH-TSEEEEC----S--SHHHHHHHHHHHHHC
T ss_pred HHHHHhCcE--EEECCcc-hHHHHHHcCCCEEEccCCCCcc----hhhhC-CceEEeC----C--CHHHHHHHHHHHHhC
Confidence 468999999 9999864 4889999999999998744332 23453 8888774 2 889999999999999
Q ss_pred HHHHH
Q 012744 418 QNFKA 422 (457)
Q Consensus 418 ~~~~~ 422 (457)
++.++
T Consensus 343 ~~~~~ 347 (384)
T 1vgv_A 343 ENEYQ 347 (384)
T ss_dssp HHHHH
T ss_pred hHHHh
Confidence 86544
No 30
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.38 E-value=1.6e-10 Score=112.36 Aligned_cols=355 Identities=10% Similarity=-0.002 Sum_probs=177.5
Q ss_pred CCCEEEEEcCC-----CCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHh----------hhcC-CCCCCCCeEEEec
Q 012744 2 SSPHVVVIPNP-----EQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLE----------SLEG-KNYIGEQIHLVSI 65 (457)
Q Consensus 2 ~~~~vl~~~~~-----~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~----------~~~~-~~~~~~~~~~~~~ 65 (457)
++|||++++.. ..|--.-+..||+.|+++||+|+++++......-.. .... ......++.++.+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 47999998833 346666789999999999999999995432211000 0000 0001136777766
Q ss_pred CCCCCCCC-CcchHHHH-HHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc--hHHHHHHHcCCceEEEechhhHH
Q 012744 66 PDGMEPWD-DRSDMRKL-LEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG--WAIEVAEKMKLRRAVVVITSAAT 141 (457)
Q Consensus 66 ~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~ 141 (457)
+....... ........ ...+ ..+...+..++..+.... .+||+|.+..... .+..+++..|+|+|.........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~ 158 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKA-VTFGRASVLLLNDLLREE-PLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKS 158 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHH-HHHHHHHHHHHHHHTTTS-CCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCCC
T ss_pred cchhccccccccCCcchhhhhh-HHHHHHHHHHHHHHhccC-CCCeEEEecchhhhhhHHHHhhccCCCEEEEecccccc
Confidence 54111111 11101111 2221 111223444445441111 7999999876444 35566778899998865433200
Q ss_pred HHHHhhhhhhhhccCCCCCCCCccccccccCCCCCCCccccccccccCCcchhhHHHHHHHHHHHhhhcCcEEEEcCccc
Q 012744 142 VALTFSIPKLIEDGVINSNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNMRATRAADFQLCNSTYE 221 (457)
Q Consensus 142 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~ 221 (457)
. ++... . .. ..+ ..+. ...... .. ...+..++.+++.|...
T Consensus 159 -----~--------------~~~~~--~-~~---~~~--~~~~--~~~~~~----~~------~~~~~~ad~ii~~S~~~ 199 (439)
T 3fro_A 159 -----K--------------LPAFY--F-HE---AGL--SELA--PYPDID----PE------HTGGYIADIVTTVSRGY 199 (439)
T ss_dssp -----C--------------EEHHH--H-HH---TTC--GGGC--CSSEEC----HH------HHHHHHCSEEEESCHHH
T ss_pred -----c--------------CchHH--h-Cc---ccc--cccc--ccceee----Hh------hhhhhhccEEEecCHHH
Confidence 0 00000 0 00 000 0000 000000 00 11235788888888765
Q ss_pred ccchhhc----cCCceeeeCcccCCCCCC-CCCCC-CCCCcchhhHHhccCCCCeEEEEEeCCcc-c-CCHHHHHHHHHH
Q 012744 222 LEGGAFS----MIPELLPIGPLLASNRLG-NSAGY-FLPEDSKCLEWLDQRQANSVIYVAFGSHT-V-LEQNQFQELALG 293 (457)
Q Consensus 222 le~~~~~----~~~~~~~vGpl~~~~~~~-~~~~~-~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~-~-~~~~~~~~~~~a 293 (457)
.+.. .. ...++..|..-.....-. ..... .......+.+-+.-.+ + .+++..|+.. . ...+.+...+..
T Consensus 200 ~~~~-~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~i~~~G~~~~~~Kg~~~li~a~~~ 276 (439)
T 3fro_A 200 LIDE-WGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDE-G-VTFMFIGRFDRGQKGVDVLLKAIEI 276 (439)
T ss_dssp HHHT-HHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHTCCS-C-EEEEEECCSSCTTBCHHHHHHHHHH
T ss_pred HHHH-hhhhhhcCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcCCCC-C-cEEEEEcccccccccHHHHHHHHHH
Confidence 5432 12 223454444332221110 00000 0001122233333222 3 6777788765 3 234444444444
Q ss_pred Hhh----cCCcEEEEEcCCCCCCCcCCCchhHH---HHhcCCceeecCCCch---hhccCCCccceeec----cCcchhh
Q 012744 294 LEI----CNRSFLWVVRPDITNDANDAYPEGFR---ERVAARGQMISWSPQQ---KVLTHPSISCFMSH----CGWNSTT 359 (457)
Q Consensus 294 ~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~nv~~~~~~pq~---~ll~~~~~~~~I~H----gG~~s~~ 359 (457)
+.. .+.+++++..+. ....+.+. ++.+.++.+.+|+++. +++..+++ +|.- |--+++.
T Consensus 277 l~~~~~~~~~~l~i~G~g~------~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~ 348 (439)
T 3fro_A 277 LSSKKEFQEMRFIIIGKGD------PELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVAL 348 (439)
T ss_dssp HHTSGGGGGEEEEEECCCC------HHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHH
T ss_pred HHhcccCCCeEEEEEcCCC------hhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHH
Confidence 433 344444443322 10001122 2234344466889986 47899998 7743 3347999
Q ss_pred hhhhcCCceeccccccchhhhHHhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhC-CHH
Q 012744 360 EGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLG-DQN 419 (457)
Q Consensus 360 eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~-~~~ 419 (457)
||+++|+|+|+... ......+.. |.|..+.. -+.++++++|.++++ |++
T Consensus 349 EAma~G~Pvi~s~~----~~~~e~~~~--~~g~~~~~-----~d~~~la~~i~~ll~~~~~ 398 (439)
T 3fro_A 349 EAMCLGAIPIASAV----GGLRDIITN--ETGILVKA-----GDPGELANAILKALELSRS 398 (439)
T ss_dssp HHHHTTCEEEEESS----THHHHHCCT--TTCEEECT-----TCHHHHHHHHHHHHHHTTT
T ss_pred HHHHCCCCeEEcCC----CCcceeEEc--CceEEeCC-----CCHHHHHHHHHHHHhcCHH
Confidence 99999999998643 334444443 78887753 478999999999998 764
No 31
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.35 E-value=1.1e-11 Score=118.81 Aligned_cols=321 Identities=10% Similarity=0.060 Sum_probs=168.1
Q ss_pred CCCEEEEEcCCCCcChHHHHHHHHHHHhC-CCeEEEEeCCcchh----HHHhhhcCCCCCCCCeE-EEecCCCCCCCCCc
Q 012744 2 SSPHVVVIPNPEQGHVIPLLELSQNLAKH-GLRITFVNSEYNHK----RVLESLEGKNYIGEQIH-LVSIPDGMEPWDDR 75 (457)
Q Consensus 2 ~~~~vl~~~~~~~GH~~p~~~la~~L~~~-Gh~Vt~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 75 (457)
+.+||+++ .|+.....-+.+|.++|.++ |+++.++.+....+ .+... ++. .+.+. ... ..
T Consensus 24 ~m~ki~~v-~Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~---------~i~~~~~l~--~~~--~~ 89 (396)
T 3dzc_A 24 AMKKVLIV-FGTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELF---------SITPDFDLN--IME--PG 89 (396)
T ss_dssp CCEEEEEE-ECSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHT---------TCCCSEECC--CCC--TT
T ss_pred CCCeEEEE-EeccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhc---------CCCCceeee--cCC--CC
Confidence 34465554 47777788889999999987 78887666544432 12222 331 01221 100 11
Q ss_pred chHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecC--Cc-chHHHHHHHcCCceEEEechhhHHHHHHhhhhhhh
Q 012744 76 SDMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADG--AA-GWAIEVAEKMKLRRAVVVITSAATVALTFSIPKLI 152 (457)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~--~~-~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~ 152 (457)
....... ......+.++++. .+||+|++-. .. ..+..+|..+|||++.+....
T Consensus 90 ~~~~~~~----~~~~~~l~~~l~~------~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~-------------- 145 (396)
T 3dzc_A 90 QTLNGVT----SKILLGMQQVLSS------EQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGL-------------- 145 (396)
T ss_dssp CCHHHHH----HHHHHHHHHHHHH------HCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCC--------------
T ss_pred CCHHHHH----HHHHHHHHHHHHh------cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc--------------
Confidence 1122211 1222345556666 8999988732 22 244678899999987642110
Q ss_pred hccCCCCCCCCccccccccCCCCCCCccccccccccCCcchhhHHHHHHHHHHHhhhcCcEEEEcCcccccchhh-cc-C
Q 012744 153 EDGVINSNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNMRATRAADFQLCNSTYELEGGAF-SM-I 230 (457)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~-~~-~ 230 (457)
..+.. . ........+.. ....++.+++.+...-+.-.. .. +
T Consensus 146 -----------------------rs~~~-------~-~~~~~~~~r~~------~~~~a~~~~~~se~~~~~l~~~G~~~ 188 (396)
T 3dzc_A 146 -----------------------RTGNI-------Y-SPWPEEGNRKL------TAALTQYHFAPTDTSRANLLQENYNA 188 (396)
T ss_dssp -----------------------CCSCT-------T-SSTTHHHHHHH------HHHTCSEEEESSHHHHHHHHHTTCCG
T ss_pred -----------------------ccccc-------c-cCCcHHHHHHH------HHHhcCEEECCCHHHHHHHHHcCCCc
Confidence 00000 0 00000111111 013467777777653332211 11 2
Q ss_pred CceeeeCcccCCCCCCCCCCCCCCC--------cchhhHHhc-cCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhc----
Q 012744 231 PELLPIGPLLASNRLGNSAGYFLPE--------DSKCLEWLD-QRQANSVIYVAFGSHTVLEQNQFQELALGLEIC---- 297 (457)
Q Consensus 231 ~~~~~vGpl~~~~~~~~~~~~~~~~--------~~~l~~~l~-~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~---- 297 (457)
.++..+|....+.... .+. ..++.+.+. -..++++|+++.+-...... .+..+++++...
T Consensus 189 ~ki~vvGn~~~d~~~~------~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~ 261 (396)
T 3dzc_A 189 ENIFVTGNTVIDALLA------VREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGG-GFERICQALITTAEQH 261 (396)
T ss_dssp GGEEECCCHHHHHHHH------HHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHC
T ss_pred CcEEEECCcHHHHHHH------hhhhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchh-HHHHHHHHHHHHHHhC
Confidence 3688888533221100 000 012222222 11345677776532222222 245666666433
Q ss_pred -CCcEEEEEcCCCCCCCcCCCchhHHHH--hcCCceeecCCCc---hhhccCCCccceeeccCcchhhhhhhcCCceecc
Q 012744 298 -NRSFLWVVRPDITNDANDAYPEGFRER--VAARGQMISWSPQ---QKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCW 371 (457)
Q Consensus 298 -~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~nv~~~~~~pq---~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~ 371 (457)
+.++++..+.. ..+.+.+.+. ..+++.+.+++++ ..+++.+++ +|+-.| |.+.||.++|+|+|+.
T Consensus 262 ~~~~~v~~~g~~------~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~ 332 (396)
T 3dzc_A 262 PECQILYPVHLN------PNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVM 332 (396)
T ss_dssp TTEEEEEECCBC------HHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEEC
T ss_pred CCceEEEEeCCC------hHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEc
Confidence 45555544321 0111122221 2367888877754 368999999 999988 6667999999999997
Q ss_pred ccccchhhhHHhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCCHHHHHHH
Q 012744 372 PFFADQFMNTTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQNFKARA 424 (457)
Q Consensus 372 P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a 424 (457)
.-..+++ .+.+. |.++.+. .+.++|.+++.++++|++.+++.
T Consensus 333 ~~~~~~~----e~v~~-G~~~lv~------~d~~~l~~ai~~ll~d~~~~~~m 374 (396)
T 3dzc_A 333 RETTERP----EAVAA-GTVKLVG------TNQQQICDALSLLLTDPQAYQAM 374 (396)
T ss_dssp CSSCSCH----HHHHH-TSEEECT------TCHHHHHHHHHHHHHCHHHHHHH
T ss_pred cCCCcch----HHHHc-CceEEcC------CCHHHHHHHHHHHHcCHHHHHHH
Confidence 5444443 23453 8775552 26899999999999998755433
No 32
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.34 E-value=1.9e-11 Score=114.91 Aligned_cols=151 Identities=11% Similarity=0.038 Sum_probs=96.1
Q ss_pred EEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchh---HHHHhcCCceeecCCCch---hhccCCC
Q 012744 272 IYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEG---FRERVAARGQMISWSPQQ---KVLTHPS 345 (457)
Q Consensus 272 v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~nv~~~~~~pq~---~ll~~~~ 345 (457)
+++..|+.. +.+.+..+++++...+.+++++..+. ..+. +.++..++|.+.+|+++. +++..++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~--------~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad 233 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAW--------EPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAH 233 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCC--------CHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCS
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCcc--------cHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCC
Confidence 445567653 34456677777777777766654432 1122 223345889999999975 7899999
Q ss_pred ccceeec-------------cC-cchhhhhhhcCCceeccccccchhhhHHhhhh--hhceeEEeeccCCCccCHHHHHH
Q 012744 346 ISCFMSH-------------CG-WNSTTEGVSNGVPFLCWPFFADQFMNTTYICD--VWKVGLRLERNQSGIIGREEIKN 409 (457)
Q Consensus 346 ~~~~I~H-------------gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~--~lG~g~~l~~~~~~~~~~~~l~~ 409 (457)
+ +|.. -| -+++.||+++|+|+|+.... .....+.+ . +.|..+ .. +.+++++
T Consensus 234 v--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~~~~~~-~~g~~~-----~~-d~~~l~~ 300 (342)
T 2iuy_A 234 A--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIVPSVGE-VVGYGT-----DF-APDEARR 300 (342)
T ss_dssp E--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHGGGGEE-ECCSSS-----CC-CHHHHHH
T ss_pred E--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHhcccCC-CceEEc-----CC-CHHHHHH
Confidence 8 7732 33 36899999999999988653 35555554 3 466555 34 8999999
Q ss_pred HHHHHhCCHHHHHHHHHHH-HHHHhhhhcCCChHHHHHHHHHHHhc
Q 012744 410 KVDQVLGDQNFKARALKLK-EKALSSVREGGSSNKAIQNFVQSIKQ 454 (457)
Q Consensus 410 ~i~~~l~~~~~~~~a~~l~-~~~~~~~~~~g~~~~~~~~~~~~~~~ 454 (457)
+|.++++ .+++++.. +.+.- ....+.+.++++++.+
T Consensus 301 ~i~~l~~----~~~~~~~~~~~~s~-----~~~~~~~~~~~~~~~~ 337 (342)
T 2iuy_A 301 TLAGLPA----SDEVRRAAVRLWGH-----VTIAERYVEQYRRLLA 337 (342)
T ss_dssp HHHTSCC----HHHHHHHHHHHHBH-----HHHHHHHHHHHHHHHT
T ss_pred HHHHHHH----HHHHHHHHHHhcCH-----HHHHHHHHHHHHHHHc
Confidence 9999997 45555443 33322 2333444455555443
No 33
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.34 E-value=2.2e-09 Score=102.82 Aligned_cols=319 Identities=11% Similarity=0.072 Sum_probs=168.0
Q ss_pred CCEEEEEcCCCC-cChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcchHHHH
Q 012744 3 SPHVVVIPNPEQ-GHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSDMRKL 81 (457)
Q Consensus 3 ~~~vl~~~~~~~-GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (457)
+.++....+|.. |.-.-...|++.|.++||+|++++........ ...+++.+..++........... ..
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~--------~~~~~i~~~~~~~~~~~~~~~~~-~~- 84 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLN--------KVYPNIYFHEVTVNQYSVFQYPP-YD- 84 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC------------CCCTTEEEECCCCC----CCSCC-HH-
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCccc--------ccCCceEEEeccccccccccccc-cc-
Confidence 456777777654 67778889999999999999999975432111 11246777665421111000000 00
Q ss_pred HHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc--hHHHHHHH-c--CCceEEEechhhHHHHHHhhhhhhhhccC
Q 012744 82 LEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG--WAIEVAEK-M--KLRRAVVVITSAATVALTFSIPKLIEDGV 156 (457)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~--~~~~~A~~-l--giP~v~~~~~~~~~~~~~~~~p~~~~~~~ 156 (457)
.. ....+.++++. .+||+|++..... ....++.. + ++|++.........
T Consensus 85 ~~-----~~~~l~~~l~~------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--------------- 138 (394)
T 2jjm_A 85 LA-----LASKMAEVAQR------ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT--------------- 138 (394)
T ss_dssp HH-----HHHHHHHHHHH------HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH---------------
T ss_pred HH-----HHHHHHHHHHH------cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc---------------
Confidence 00 01223444444 7899999874433 23334443 3 59988764432210
Q ss_pred CCCCCCCccccccccCCCCCCCccccccccccCCcchhhHHHHHHHHHHHhhhcCcEEEEcCcccccchhhcc--CCcee
Q 012744 157 INSNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNMRATRAADFQLCNSTYELEGGAFSM--IPELL 234 (457)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~--~~~~~ 234 (457)
. .+.. . ... ... ...+..++.+++.|....+.-.... ..++.
T Consensus 139 --------------~-~~~~---------~-----~~~-~~~------~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~ 182 (394)
T 2jjm_A 139 --------------V-LGSD---------P-----SLN-NLI------RFGIEQSDVVTAVSHSLINETHELVKPNKDIQ 182 (394)
T ss_dssp --------------T-TTTC---------T-----TTH-HHH------HHHHHHSSEEEESCHHHHHHHHHHTCCSSCEE
T ss_pred --------------c-cCCC---------H-----HHH-HHH------HHHHhhCCEEEECCHHHHHHHHHhhCCcccEE
Confidence 0 0000 0 000 000 1123678899988876544331111 23565
Q ss_pred eeCcccCCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhh----cCCcEEEEEcCCCC
Q 012744 235 PIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTVLEQNQFQELALGLEI----CNRSFLWVVRPDIT 310 (457)
Q Consensus 235 ~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~----~~~~~i~~~~~~~~ 310 (457)
.|..-....... ......+.+-+.... +..+++..|.... ...+..+++++.. .+.+++++..+.
T Consensus 183 vi~ngv~~~~~~------~~~~~~~~~~~~~~~-~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~-- 251 (394)
T 2jjm_A 183 TVYNFIDERVYF------KRDMTQLKKEYGISE-SEKILIHISNFRK--VKRVQDVVQAFAKIVTEVDAKLLLVGDGP-- 251 (394)
T ss_dssp ECCCCCCTTTCC------CCCCHHHHHHTTCC----CEEEEECCCCG--GGTHHHHHHHHHHHHHSSCCEEEEECCCT--
T ss_pred EecCCccHHhcC------CcchHHHHHHcCCCC-CCeEEEEeecccc--ccCHHHHHHHHHHHHhhCCCEEEEECCch--
Confidence 565443322111 011222223232212 2255666787642 2233344444432 245544443222
Q ss_pred CCCcCCCchhHHHH-----hcCCceeecCCCc-hhhccCCCcccee----eccCcchhhhhhhcCCceeccccccchhhh
Q 012744 311 NDANDAYPEGFRER-----VAARGQMISWSPQ-QKVLTHPSISCFM----SHCGWNSTTEGVSNGVPFLCWPFFADQFMN 380 (457)
Q Consensus 311 ~~~~~~~~~~~~~~-----~~~nv~~~~~~pq-~~ll~~~~~~~~I----~HgG~~s~~eal~~GvP~l~~P~~~DQ~~n 380 (457)
..+.+.+. ..++|.+.++..+ ..++..+++ +| .-|..+++.||+++|+|+|+.+.. ..
T Consensus 252 ------~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~ 319 (394)
T 2jjm_A 252 ------EFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GI 319 (394)
T ss_dssp ------THHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TS
T ss_pred ------HHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----Ch
Confidence 12223222 1367777777554 479999999 88 455567999999999999987653 23
Q ss_pred HHhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCCHHHHH
Q 012744 381 TTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQNFKA 422 (457)
Q Consensus 381 a~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~ 422 (457)
...+.+. +.|..++. -+.++++++|.++++|++.++
T Consensus 320 ~e~v~~~-~~g~~~~~-----~d~~~la~~i~~l~~~~~~~~ 355 (394)
T 2jjm_A 320 PEVIQHG-DTGYLCEV-----GDTTGVADQAIQLLKDEELHR 355 (394)
T ss_dssp TTTCCBT-TTEEEECT-----TCHHHHHHHHHHHHHCHHHHH
T ss_pred HHHhhcC-CceEEeCC-----CCHHHHHHHHHHHHcCHHHHH
Confidence 3444442 67877742 478999999999999986443
No 34
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.32 E-value=6.3e-11 Score=112.83 Aligned_cols=323 Identities=13% Similarity=0.090 Sum_probs=165.7
Q ss_pred CCCEEEEEcCCCCcChHHHHHHHHHHHhC-C-CeEEEEeCCcchhHHHhhhcCCCCCCCCeEE-EecCCCCCCCCCcchH
Q 012744 2 SSPHVVVIPNPEQGHVIPLLELSQNLAKH-G-LRITFVNSEYNHKRVLESLEGKNYIGEQIHL-VSIPDGMEPWDDRSDM 78 (457)
Q Consensus 2 ~~~~vl~~~~~~~GH~~p~~~la~~L~~~-G-h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 78 (457)
++|||++++ ++.++......++++|+++ | |+|+++++....+........ .++.. ..++...+ ..+.
T Consensus 7 ~~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~----~~~~ 76 (375)
T 3beo_A 7 ERLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSI-----FGITPDFDLNIMKD----RQTL 76 (375)
T ss_dssp SCEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHH-----HTCCCSEECCCCCT----TCCH
T ss_pred cCceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHH-----cCCCCccccccCCC----cccH
Confidence 368999987 4467778888999999887 5 888777765443222111000 02221 12221111 0111
Q ss_pred HHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCC-cc--hHHHHHHHcCCceEEEechhhHHHHHHhhhhhhhhcc
Q 012744 79 RKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGA-AG--WAIEVAEKMKLRRAVVVITSAATVALTFSIPKLIEDG 155 (457)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~-~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~ 155 (457)
..... .....+.++++. .+||+|++... .. .+..+++..|+|++.+.....
T Consensus 77 ~~~~~----~~~~~l~~~l~~------~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~~---------------- 130 (375)
T 3beo_A 77 IDITT----RGLEGLDKVMKE------AKPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGLR---------------- 130 (375)
T ss_dssp HHHHH----HHHHHHHHHHHH------HCCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCCC----------------
T ss_pred HHHHH----HHHHHHHHHHHH------hCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc----------------
Confidence 11111 111224445555 79999998532 22 334667889999986321100
Q ss_pred CCCCCCCCccccccccCCCCCCCccccccccccCCcchhhHHHHHHHHHHHhhhcCcEEEEcCcccccchhh-ccC-Cce
Q 012744 156 VINSNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNMRATRAADFQLCNSTYELEGGAF-SMI-PEL 233 (457)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~-~~~-~~~ 233 (457)
. ... . ..+ ........ ....++.+++.+...-+.-.. ..+ .++
T Consensus 131 ---------------~---~~~-----~--~~~----~~~~~~~~------~~~~~d~ii~~s~~~~~~~~~~g~~~~~i 175 (375)
T 3beo_A 131 ---------------T---WDK-----Y--SPY----PEEMNRQL------TGVMADLHFSPTAKSATNLQKENKDESRI 175 (375)
T ss_dssp ---------------C---SCT-----T--SST----THHHHHHH------HHHHCSEEEESSHHHHHHHHHTTCCGGGE
T ss_pred ---------------c---ccc-----c--CCC----hhHhhhhH------HhhhhheeeCCCHHHHHHHHHcCCCcccE
Confidence 0 000 0 000 00001111 113378888887665432211 112 256
Q ss_pred eeeCcc-cCCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhc-----CCcEEEEEcC
Q 012744 234 LPIGPL-LASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTVLEQNQFQELALGLEIC-----NRSFLWVVRP 307 (457)
Q Consensus 234 ~~vGpl-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~ 307 (457)
..+|.. ......... .....++.+-+ .++++++++.|...... +.+..+++++... +.++++ +.
T Consensus 176 ~vi~n~~~d~~~~~~~----~~~~~~~~~~~---~~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~--~~ 245 (375)
T 3beo_A 176 FITGNTAIDALKTTVK----ETYSHPVLEKL---GNNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVY--PV 245 (375)
T ss_dssp EECCCHHHHHHHHHCC----SSCCCHHHHTT---TTSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEE--EC
T ss_pred EEECChhHhhhhhhhh----hhhhHHHHHhc---cCCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEE--eC
Confidence 667643 211100000 00111222212 23557777777643221 3355566666432 344333 32
Q ss_pred CCCCCCcCCCchhHHHHhc--CCceeecCCCch---hhccCCCccceeeccCcchhhhhhhcCCceeccccccchhhhHH
Q 012744 308 DITNDANDAYPEGFRERVA--ARGQMISWSPQQ---KVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQFMNTT 382 (457)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~--~nv~~~~~~pq~---~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~ 382 (457)
. ....+.+.+.+... ++|.+.+++++. .++..+++ +|+.+| +++.||+++|+|+|+.+..... ..
T Consensus 246 g----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~---~e 315 (375)
T 3beo_A 246 H----MNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER---PE 315 (375)
T ss_dssp C----SCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC---HH
T ss_pred C----CCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC---ce
Confidence 1 00111112222223 688887877754 68999999 998874 4588999999999988543332 22
Q ss_pred hhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCCHHHHHH
Q 012744 383 YICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQNFKAR 423 (457)
Q Consensus 383 ~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 423 (457)
+.+. |.|..++ . +.++|+++|.++++|++.+++
T Consensus 316 -~v~~-g~g~~v~-----~-d~~~la~~i~~ll~~~~~~~~ 348 (375)
T 3beo_A 316 -GIEA-GTLKLAG-----T-DEETIFSLADELLSDKEAHDK 348 (375)
T ss_dssp -HHHT-TSEEECC-----S-CHHHHHHHHHHHHHCHHHHHH
T ss_pred -eecC-CceEEcC-----C-CHHHHHHHHHHHHhChHhHhh
Confidence 3443 8887763 2 889999999999999865543
No 35
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.32 E-value=1.2e-09 Score=108.32 Aligned_cols=355 Identities=14% Similarity=0.106 Sum_probs=179.3
Q ss_pred CC-CCEEEEEcCC---------------CCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCC--CCCCeEE
Q 012744 1 MS-SPHVVVIPNP---------------EQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNY--IGEQIHL 62 (457)
Q Consensus 1 m~-~~~vl~~~~~---------------~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 62 (457)
|+ +|||++++.. ..|.-..+..|++.|.++||+|++++................. ...++++
T Consensus 4 m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~v 83 (499)
T 2r60_A 4 MTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRI 83 (499)
T ss_dssp ---CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCSEEECTTCSSEEE
T ss_pred ccccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhhHHhccCCCCeEE
Confidence 44 4899999852 3577788999999999999999999865432110000000000 0247888
Q ss_pred EecCCCCCCCCCcchHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc--hHHHHHHHcCCceEEEechhhH
Q 012744 63 VSIPDGMEPWDDRSDMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG--WAIEVAEKMKLRRAVVVITSAA 140 (457)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~--~~~~~A~~lgiP~v~~~~~~~~ 140 (457)
+.++...............+..+. ..+.++++. .. .+||+|.+..... .+..+++.+|+|+|........
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~l~~---~~-~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~~~~ 155 (499)
T 2r60_A 84 VRIPFGGDKFLPKEELWPYLHEYV----NKIINFYRE---EG-KFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLGA 155 (499)
T ss_dssp EEECCSCSSCCCGGGCGGGHHHHH----HHHHHHHHH---HT-CCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSSCHH
T ss_pred EEecCCCcCCcCHHHHHHHHHHHH----HHHHHHHHh---cC-CCCCEEEEcCCcchHHHHHHHHhcCCcEEEEccCccc
Confidence 777643211111111111111111 112233332 11 3799998875332 3445677889999875444322
Q ss_pred HHHHHhhhhhhhhccCCCCCCCCccccccccCCCCCCCccccccccccCCcchhhHHH--HHHHHHHHhhhcCcEEEEcC
Q 012744 141 TVALTFSIPKLIEDGVINSNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFF--DFMVKNMRATRAADFQLCNS 218 (457)
Q Consensus 141 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~s 218 (457)
..... .. . .... ......... .........+..++.+++.|
T Consensus 156 ~~~~~----------~~-------------------~---~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S 198 (499)
T 2r60_A 156 QKMEK----------LN-------------------V---NTSN-----FKEMDERFKFHRRIIAERLTMSYADKIIVST 198 (499)
T ss_dssp HHHHT----------TC-------------------C---CSTT-----SHHHHHHHCHHHHHHHHHHHHHHCSEEEESS
T ss_pred ccchh----------hc-------------------c---CCCC-----cchhhhhHHHHHHHHHHHHHHhcCCEEEECC
Confidence 10000 00 0 0000 000000000 00000112347889999998
Q ss_pred cccccchhhc--c--------CCceeeeCcccCCCCCCCCCCCCCCC-c----chhhHHhc-----cCCCCeEEEEEeCC
Q 012744 219 TYELEGGAFS--M--------IPELLPIGPLLASNRLGNSAGYFLPE-D----SKCLEWLD-----QRQANSVIYVAFGS 278 (457)
Q Consensus 219 ~~~le~~~~~--~--------~~~~~~vGpl~~~~~~~~~~~~~~~~-~----~~l~~~l~-----~~~~~~~v~vs~Gs 278 (457)
....+.-... + ..++..|..-.....-. +. . ..+.+-+. ...++ .+++..|.
T Consensus 199 ~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~-------~~~~~~~~~~~r~~~~~~~~~~~~~~-~~i~~vGr 270 (499)
T 2r60_A 199 SQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFD-------GEYGDKIKAKITKYLERDLGSERMEL-PAIIASSR 270 (499)
T ss_dssp HHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTTSS-------SCCCHHHHHHHHHHHHHHSCGGGTTS-CEEEECSC
T ss_pred HHHHHHHHhhhcccccccccCCCCeEEECCCcChhhcC-------ccchhhhHHHHHHHhcccccccCCCC-cEEEEeec
Confidence 7754432111 1 12444444332221111 11 1 22222222 11222 46677787
Q ss_pred cccCCHHHHHHHHHHHhhcC-----CcEEEEEcCCCCCC-CcCCC-------chhHHHH-----hcCCceeecCCCch--
Q 012744 279 HTVLEQNQFQELALGLEICN-----RSFLWVVRPDITND-ANDAY-------PEGFRER-----VAARGQMISWSPQQ-- 338 (457)
Q Consensus 279 ~~~~~~~~~~~~~~a~~~~~-----~~~i~~~~~~~~~~-~~~~~-------~~~~~~~-----~~~nv~~~~~~pq~-- 338 (457)
.. +.+.+..+++++.... ...++++++..... ....+ .+.+.+. ..++|.+.+++|+.
T Consensus 271 l~--~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~ 348 (499)
T 2r60_A 271 LD--QKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQEL 348 (499)
T ss_dssp CC--GGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHHH
T ss_pred Cc--cccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEECCCCCHHHH
Confidence 53 2344556666665442 22345555410000 00001 1222221 24688999999865
Q ss_pred -hhccCC----Cccceeecc---C-cchhhhhhhcCCceeccccccchhhhHHhhhhhhceeEEeeccCCCccCHHHHHH
Q 012744 339 -KVLTHP----SISCFMSHC---G-WNSTTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLRLERNQSGIIGREEIKN 409 (457)
Q Consensus 339 -~ll~~~----~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~ 409 (457)
.++..+ ++ +|.-. | -.++.||+++|+|+|+... ......+.+. ..|..++. -+.+++++
T Consensus 349 ~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~~~-----~d~~~la~ 416 (499)
T 2r60_A 349 AGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLVDP-----EDPEDIAR 416 (499)
T ss_dssp HHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEECT-----TCHHHHHH
T ss_pred HHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEeCC-----CCHHHHHH
Confidence 588888 88 77432 3 4689999999999998754 3345555552 57887743 47899999
Q ss_pred HHHHHhCCHHHHH
Q 012744 410 KVDQVLGDQNFKA 422 (457)
Q Consensus 410 ~i~~~l~~~~~~~ 422 (457)
+|.++++|++.++
T Consensus 417 ~i~~ll~~~~~~~ 429 (499)
T 2r60_A 417 GLLKAFESEETWS 429 (499)
T ss_dssp HHHHHHSCHHHHH
T ss_pred HHHHHHhCHHHHH
Confidence 9999999986443
No 36
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.29 E-value=7e-10 Score=106.69 Aligned_cols=311 Identities=12% Similarity=0.084 Sum_probs=165.0
Q ss_pred CCEEEEEcCC---C-CcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcchH
Q 012744 3 SPHVVVIPNP---E-QGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSDM 78 (457)
Q Consensus 3 ~~~vl~~~~~---~-~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (457)
+|||+|++.. . .|.-..+..+++.|.++||+|++++............. . .+ +++.++... . .
T Consensus 20 ~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~---~--~~-~~~~~~~~~----~---~ 86 (406)
T 2gek_A 20 HMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVV---S--GG-KAVPIPYNG----S---V 86 (406)
T ss_dssp -CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEE---E--CC-CCC---------------
T ss_pred cceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccc---c--CC-cEEeccccC----C---c
Confidence 5799998842 2 56678899999999999999999998654321110000 0 01 111111000 0 0
Q ss_pred HHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc--hHHHHHHHcCCceEEEechhhHHHHHHhhhhhhhhccC
Q 012744 79 RKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG--WAIEVAEKMKLRRAVVVITSAATVALTFSIPKLIEDGV 156 (457)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~ 156 (457)
.... +.......+.++++. .+||+|++..... .+..+++..++|++.........
T Consensus 87 ~~~~--~~~~~~~~l~~~l~~------~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--------------- 143 (406)
T 2gek_A 87 ARLR--FGPATHRKVKKWIAE------GDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTK--------------- 143 (406)
T ss_dssp ------CCHHHHHHHHHHHHH------HCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCS---------------
T ss_pred cccc--ccHHHHHHHHHHHHh------cCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchh---------------
Confidence 0000 000001233444444 7899999876544 34566777899998854331100
Q ss_pred CCCCCCCccccccccCCCCCCCccccccccccCCcchhhHHHHHHHHHH-HhhhcCcEEEEcCcccccchhhccC-Ccee
Q 012744 157 INSNGTPIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNM-RATRAADFQLCNSTYELEGGAFSMI-PELL 234 (457)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~s~~~le~~~~~~~-~~~~ 234 (457)
. .....+.+.. ..+..++.+++.+....+.-...++ +++
T Consensus 144 -----------------------------~---------~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~- 184 (406)
T 2gek_A 144 -----------------------------S---------LTLSVFQGILRPYHEKIIGRIAVSDLARRWQMEALGSDAV- 184 (406)
T ss_dssp -----------------------------H---------HHHHHHHSTTHHHHTTCSEEEESSHHHHHHHHHHHSSCEE-
T ss_pred -----------------------------h---------hhHHHHHHHHHHHHhhCCEEEECCHHHHHHHHHhcCCCcE-
Confidence 0 0000000000 2346778888887665443211222 223
Q ss_pred eeCcccCCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCc-ccCCHHHHHHHHHHHhhc-----CCcEEEEEcCC
Q 012744 235 PIGPLLASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSH-TVLEQNQFQELALGLEIC-----NRSFLWVVRPD 308 (457)
Q Consensus 235 ~vGpl~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~-~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~ 308 (457)
.|.......... . ...... + ..+ ..+++..|+. .. .+.+..+++++... +.+++++..+.
T Consensus 185 vi~~~v~~~~~~-~----~~~~~~----~--~~~-~~~i~~~G~~~~~--~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~ 250 (406)
T 2gek_A 185 EIPNGVDVASFA-D----APLLDG----Y--PRE-GRTVLFLGRYDEP--RKGMAVLLAALPKLVARFPDVEILIVGRGD 250 (406)
T ss_dssp ECCCCBCHHHHH-T----CCCCTT----C--SCS-SCEEEEESCTTSG--GGCHHHHHHHHHHHHTTSTTCEEEEESCSC
T ss_pred EecCCCChhhcC-C----Cchhhh----c--cCC-CeEEEEEeeeCcc--ccCHHHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 443222111000 0 000000 0 011 2466667775 32 22344444444332 44544443322
Q ss_pred CCCCCcCCCchhHHHH---hcCCceeecCCCch---hhccCCCccceeec----cCc-chhhhhhhcCCceeccccccch
Q 012744 309 ITNDANDAYPEGFRER---VAARGQMISWSPQQ---KVLTHPSISCFMSH----CGW-NSTTEGVSNGVPFLCWPFFADQ 377 (457)
Q Consensus 309 ~~~~~~~~~~~~~~~~---~~~nv~~~~~~pq~---~ll~~~~~~~~I~H----gG~-~s~~eal~~GvP~l~~P~~~DQ 377 (457)
. +.+.+. ..++|.+.+++++. +++..+++ +|.- .|. +++.||+++|+|+|+.+.
T Consensus 251 --------~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~---- 315 (406)
T 2gek_A 251 --------E-DELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL---- 315 (406)
T ss_dssp --------H-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----
T ss_pred --------H-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----
Confidence 1 333332 25788899999975 79999999 7744 343 589999999999998765
Q ss_pred hhhHHhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCCHHHHHH
Q 012744 378 FMNTTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQNFKAR 423 (457)
Q Consensus 378 ~~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 423 (457)
......+.+. +.|..+.. -+.+++.++|.++++|++.+++
T Consensus 316 ~~~~e~i~~~-~~g~~~~~-----~d~~~l~~~i~~l~~~~~~~~~ 355 (406)
T 2gek_A 316 DAFRRVLADG-DAGRLVPV-----DDADGMAAALIGILEDDQLRAG 355 (406)
T ss_dssp HHHHHHHTTT-TSSEECCT-----TCHHHHHHHHHHHHHCHHHHHH
T ss_pred CcHHHHhcCC-CceEEeCC-----CCHHHHHHHHHHHHcCHHHHHH
Confidence 4455666653 67877742 4789999999999999864443
No 37
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.20 E-value=9e-09 Score=97.69 Aligned_cols=133 Identities=15% Similarity=0.251 Sum_probs=88.5
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHhhcC------CcEEEEEcCCCCCCCcCCCchhHHH---H--hcCCceeecCCCc-
Q 012744 270 SVIYVAFGSHTVLEQNQFQELALGLEICN------RSFLWVVRPDITNDANDAYPEGFRE---R--VAARGQMISWSPQ- 337 (457)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~------~~~i~~~~~~~~~~~~~~~~~~~~~---~--~~~nv~~~~~~pq- 337 (457)
..+++..|+.. +.+.+..+++++.... .+++ +++.. . .+.+.+ + ..+++.+.++..+
T Consensus 196 ~~~i~~~G~~~--~~K~~~~li~a~~~l~~~~~~~~~l~-i~G~g----~----~~~~~~~~~~~~~~~~v~~~g~~~~~ 264 (374)
T 2iw1_A 196 QNLLLQVGSDF--GRKGVDRSIEALASLPESLRHNTLLF-VVGQD----K----PRKFEALAEKLGVRSNVHFFSGRNDV 264 (374)
T ss_dssp CEEEEEECSCT--TTTTHHHHHHHHHTSCHHHHHTEEEE-EESSS----C----CHHHHHHHHHHTCGGGEEEESCCSCH
T ss_pred CeEEEEeccch--hhcCHHHHHHHHHHhHhccCCceEEE-EEcCC----C----HHHHHHHHHHcCCCCcEEECCCcccH
Confidence 36777778753 2334555666665442 3333 34332 1 122222 2 2468888888654
Q ss_pred hhhccCCCccceee----ccCcchhhhhhhcCCceeccccccchhhhHHhhhhhhceeEEeeccCCCccCHHHHHHHHHH
Q 012744 338 QKVLTHPSISCFMS----HCGWNSTTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLRLERNQSGIIGREEIKNKVDQ 413 (457)
Q Consensus 338 ~~ll~~~~~~~~I~----HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~ 413 (457)
.+++..+++ +|. -|..+++.||+++|+|+|+.+.. .+...+.+. +.|..+. ..-+.++++++|.+
T Consensus 265 ~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~-~~g~~~~----~~~~~~~l~~~i~~ 333 (374)
T 2iw1_A 265 SELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAVC----GYAHYIADA-NCGTVIA----EPFSQEQLNEVLRK 333 (374)
T ss_dssp HHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETTS----TTTHHHHHH-TCEEEEC----SSCCHHHHHHHHHH
T ss_pred HHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecCC----CchhhhccC-CceEEeC----CCCCHHHHHHHHHH
Confidence 468999998 776 45678999999999999997653 456667774 8888884 23589999999999
Q ss_pred HhCCHHHHHHH
Q 012744 414 VLGDQNFKARA 424 (457)
Q Consensus 414 ~l~~~~~~~~a 424 (457)
+++|++.+++.
T Consensus 334 l~~~~~~~~~~ 344 (374)
T 2iw1_A 334 ALTQSPLRMAW 344 (374)
T ss_dssp HHHCHHHHHHH
T ss_pred HHcChHHHHHH
Confidence 99998654433
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.12 E-value=3.5e-08 Score=95.20 Aligned_cols=83 Identities=12% Similarity=0.031 Sum_probs=63.1
Q ss_pred cCCceeecCCC---c---hhhccCCCccceeecc----CcchhhhhhhcCCceeccccccchhhhHHhhhhhhceeEEee
Q 012744 326 AARGQMISWSP---Q---QKVLTHPSISCFMSHC----GWNSTTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLRLE 395 (457)
Q Consensus 326 ~~nv~~~~~~p---q---~~ll~~~~~~~~I~Hg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~g~~l~ 395 (457)
.++|.+.+|++ + .+++..+++ +|.-. .-+++.||+++|+|+|+.+. ..+...+.+. +.|..+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~- 363 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLV- 363 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEE-
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEE-
Confidence 46888888775 2 258888998 77654 45689999999999998764 3455666663 677776
Q ss_pred ccCCCccCHHHHHHHHHHHhCCHHHHH
Q 012744 396 RNQSGIIGREEIKNKVDQVLGDQNFKA 422 (457)
Q Consensus 396 ~~~~~~~~~~~l~~~i~~~l~~~~~~~ 422 (457)
. +.++++++|.++++|++.++
T Consensus 364 ----~--d~~~la~~i~~ll~~~~~~~ 384 (416)
T 2x6q_A 364 ----R--DANEAVEVVLYLLKHPEVSK 384 (416)
T ss_dssp ----S--SHHHHHHHHHHHHHCHHHHH
T ss_pred ----C--CHHHHHHHHHHHHhCHHHHH
Confidence 2 78999999999999986443
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.04 E-value=1.6e-09 Score=102.93 Aligned_cols=314 Identities=12% Similarity=0.097 Sum_probs=166.9
Q ss_pred EEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchh-HHHhhhcCCCCCCCCeEEEecCCC-CCCCCCcchHHHHHHH
Q 012744 7 VVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHK-RVLESLEGKNYIGEQIHLVSIPDG-MEPWDDRSDMRKLLEK 84 (457)
Q Consensus 7 l~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 84 (457)
+++..|++-.+.-+.+|.++|.++ +++.++.+....+ ....... .++.. .-|+. +... ..+....
T Consensus 12 ~~~v~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~------~~~~i-~~~~~~l~~~--~~~~~~~--- 78 (385)
T 4hwg_A 12 VMTIVGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFF------DDMGI-RKPDYFLEVA--ADNTAKS--- 78 (385)
T ss_dssp EEEEECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHH------C-CCC-CCCSEECCCC--CCCSHHH---
T ss_pred eeEEEEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHH------hhCCC-CCCceecCCC--CCCHHHH---
Confidence 455678888899999999999887 8988887765543 2221100 01111 01110 1111 1111111
Q ss_pred HHHhcchHHHHHHHHHhcCCCCCeeEEEe--cCCcchHHHHHHHcCCceEEEechhhHHHHHHhhhhhhhhccCCCCCCC
Q 012744 85 RLQVMPGKLEGLIEEIHGREGEKTACLIA--DGAAGWAIEVAEKMKLRRAVVVITSAATVALTFSIPKLIEDGVINSNGT 162 (457)
Q Consensus 85 ~~~~~~~~~~~~~~~l~~~~~~~~D~vv~--D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 162 (457)
.......++++++. .+||+|++ |....++..+|.++|||++.+....
T Consensus 79 -~~~~~~~l~~~l~~------~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eagl------------------------ 127 (385)
T 4hwg_A 79 -IGLVIEKVDEVLEK------EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGN------------------------ 127 (385)
T ss_dssp -HHHHHHHHHHHHHH------HCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCC------------------------
T ss_pred -HHHHHHHHHHHHHh------cCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCC------------------------
Confidence 12222346666666 89999776 3234455788999999976642111
Q ss_pred CccccccccCCCCCCCccccccccccCCcchhhHHHHHHHHHHHhhhcCcEEEEcCcccccchhh-cc-CCceeeeCccc
Q 012744 163 PIKEQMIQLAPNMPAISTGELFWTGIGDLTMQKFFFDFMVKNMRATRAADFQLCNSTYELEGGAF-SM-IPELLPIGPLL 240 (457)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~-~~-~~~~~~vGpl~ 240 (457)
.... ..++ ....+... -.-++.+++.+...-+.-.. .. +.+++.+|-..
T Consensus 128 -------------rs~~-~~~p---------ee~nR~~~------~~~a~~~~~~te~~~~~l~~~G~~~~~I~vtGnp~ 178 (385)
T 4hwg_A 128 -------------RCFD-QRVP---------EEINRKII------DHISDVNITLTEHARRYLIAEGLPAELTFKSGSHM 178 (385)
T ss_dssp -------------CCSC-TTST---------HHHHHHHH------HHHCSEEEESSHHHHHHHHHTTCCGGGEEECCCSH
T ss_pred -------------cccc-ccCc---------HHHHHHHH------HhhhceeecCCHHHHHHHHHcCCCcCcEEEECCch
Confidence 0000 0000 00111111 12356666666543322111 11 23688888433
Q ss_pred CCCCCCCCCCCCCCCcchhhHHhccCCCCeEEEEEeCCcccCC-HHHHHHHHHHHhhc----CCcEEEEEcCCCCCCCcC
Q 012744 241 ASNRLGNSAGYFLPEDSKCLEWLDQRQANSVIYVAFGSHTVLE-QNQFQELALGLEIC----NRSFLWVVRPDITNDAND 315 (457)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~a~~~~----~~~~i~~~~~~~~~~~~~ 315 (457)
.+...... . .....++.+-+.-.. ++.|+++.|.....+ .+.+..+++++... +..+|+.....
T Consensus 179 ~D~~~~~~--~-~~~~~~~~~~lgl~~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~------- 247 (385)
T 4hwg_A 179 PEVLDRFM--P-KILKSDILDKLSLTP-KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR------- 247 (385)
T ss_dssp HHHHHHHH--H-HHHHCCHHHHTTCCT-TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH-------
T ss_pred HHHHHHhh--h-hcchhHHHHHcCCCc-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH-------
Confidence 22110000 0 001112333333222 458888888654332 24566677776443 55666655311
Q ss_pred CCchhHHHH---h--cCCceeecCCCc---hhhccCCCccceeeccCcchhhhhhhcCCceeccccccchhhhHHhhhhh
Q 012744 316 AYPEGFRER---V--AARGQMISWSPQ---QKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQFMNTTYICDV 387 (457)
Q Consensus 316 ~~~~~~~~~---~--~~nv~~~~~~pq---~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~ 387 (457)
..+.+.+. . .+|+.+.+.+++ ..+++++++ +|+-.|. .+.||..+|+|+|+++...+-+. . .+.
T Consensus 248 -~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e---~-v~~ 319 (385)
T 4hwg_A 248 -TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE---G-MDA 319 (385)
T ss_dssp -HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH---H-HHH
T ss_pred -HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh---h-hhc
Confidence 11111111 1 256777665554 479999999 9999876 46899999999999987554221 2 343
Q ss_pred hceeEEeeccCCCccCHHHHHHHHHHHhCCHH
Q 012744 388 WKVGLRLERNQSGIIGREEIKNKVDQVLGDQN 419 (457)
Q Consensus 388 lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~ 419 (457)
|.++.+. .+.++|.+++.++++|+.
T Consensus 320 -G~~~lv~------~d~~~i~~ai~~ll~d~~ 344 (385)
T 4hwg_A 320 -GTLIMSG------FKAERVLQAVKTITEEHD 344 (385)
T ss_dssp -TCCEECC------SSHHHHHHHHHHHHTTCB
T ss_pred -CceEEcC------CCHHHHHHHHHHHHhChH
Confidence 8776653 379999999999998874
No 40
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.84 E-value=9.8e-07 Score=86.83 Aligned_cols=134 Identities=9% Similarity=0.006 Sum_probs=81.2
Q ss_pred EEEEEeCCcccC-CHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHH---HHhcCCce-eecCCCch--hhccC
Q 012744 271 VIYVAFGSHTVL-EQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFR---ERVAARGQ-MISWSPQQ--KVLTH 343 (457)
Q Consensus 271 ~v~vs~Gs~~~~-~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~nv~-~~~~~pq~--~ll~~ 343 (457)
.+++..|..... ..+.+...+..+.+.+.+++++..++ ....+.+. ++.++++. +.++.... .++..
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~------~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ 365 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGD------VALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAG 365 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBC------HHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCc------hHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhc
Confidence 477778876432 22333333333333466666665432 01112222 22346787 56883332 57999
Q ss_pred CCccceeec----cCcchhhhhhhcCCceeccccccchhhhHHhhhhhh---------ceeEEeeccCCCccCHHHHHHH
Q 012744 344 PSISCFMSH----CGWNSTTEGVSNGVPFLCWPFFADQFMNTTYICDVW---------KVGLRLERNQSGIIGREEIKNK 410 (457)
Q Consensus 344 ~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~l---------G~g~~l~~~~~~~~~~~~l~~~ 410 (457)
+++ +|.- |--.++.||+++|+|+|+... ......+.+ - +.|..++. -+.++++++
T Consensus 366 adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-----~d~~~la~~ 433 (485)
T 1rzu_A 366 CDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVID-ANHAALASKAATGVQFSP-----VTLDGLKQA 433 (485)
T ss_dssp CSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEESS-----CSHHHHHHH
T ss_pred CCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecc-cccccccccCCcceEeCC-----CCHHHHHHH
Confidence 998 7743 334689999999999998754 234444443 2 46777742 478999999
Q ss_pred HHHHh---CCHHHHH
Q 012744 411 VDQVL---GDQNFKA 422 (457)
Q Consensus 411 i~~~l---~~~~~~~ 422 (457)
|.+++ +|++.++
T Consensus 434 i~~ll~~~~~~~~~~ 448 (485)
T 1rzu_A 434 IRRTVRYYHDPKLWT 448 (485)
T ss_dssp HHHHHHHHTCHHHHH
T ss_pred HHHHHHHhCCHHHHH
Confidence 99999 7876444
No 41
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.78 E-value=1.5e-05 Score=80.01 Aligned_cols=88 Identities=11% Similarity=0.061 Sum_probs=62.9
Q ss_pred CCceeecCCCch---hhccCCCccceee---ccCcchhhhhhhcCCceeccccccchhhh-HHhhhhhhceeEEeeccCC
Q 012744 327 ARGQMISWSPQQ---KVLTHPSISCFMS---HCGWNSTTEGVSNGVPFLCWPFFADQFMN-TTYICDVWKVGLRLERNQS 399 (457)
Q Consensus 327 ~nv~~~~~~pq~---~ll~~~~~~~~I~---HgG~~s~~eal~~GvP~l~~P~~~DQ~~n-a~~v~~~lG~g~~l~~~~~ 399 (457)
++|.+.+++|+. .++..+++ +|. .|+.+++.||+++|+|+|++|...=.... +..+.+ .|+...+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhc----
Confidence 678889999854 57889998 762 26667999999999999997753211112 233444 36655453
Q ss_pred CccCHHHHHHHHHHHhCCHHHHHH
Q 012744 400 GIIGREEIKNKVDQVLGDQNFKAR 423 (457)
Q Consensus 400 ~~~~~~~l~~~i~~~l~~~~~~~~ 423 (457)
+ +.+++.++|.++++|++.+++
T Consensus 507 ~--~~~~la~~i~~l~~~~~~~~~ 528 (568)
T 2vsy_A 507 A--DDAAFVAKAVALASDPAALTA 528 (568)
T ss_dssp S--SHHHHHHHHHHHHHCHHHHHH
T ss_pred C--CHHHHHHHHHHHhcCHHHHHH
Confidence 2 889999999999999875543
No 42
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.77 E-value=5.8e-06 Score=81.26 Aligned_cols=133 Identities=11% Similarity=0.063 Sum_probs=80.5
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHH---hhcCCcEEEEEcCCCCCCCcCCCchhHHH---HhcCCce-eecCCCch--hhc
Q 012744 271 VIYVAFGSHTVLEQNQFQELALGL---EICNRSFLWVVRPDITNDANDAYPEGFRE---RVAARGQ-MISWSPQQ--KVL 341 (457)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~nv~-~~~~~pq~--~ll 341 (457)
.+++..|.... .+.+..+++++ .+.+.+++++..+. ....+.+.+ +.++++. +.++.... .++
T Consensus 293 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~------~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~ 364 (485)
T 2qzs_A 293 PLFAVVSRLTS--QKGLDLVLEALPGLLEQGGQLALLGAGD------PVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIM 364 (485)
T ss_dssp CEEEEEEEESG--GGCHHHHHHHHHHHHHTTCEEEEEEEEC------HHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHH
T ss_pred eEEEEeccCcc--ccCHHHHHHHHHHHhhCCcEEEEEeCCc------hHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHH
Confidence 55666676532 23344444444 33366766665432 011122222 2346786 66884332 689
Q ss_pred cCCCccceeec----cCcchhhhhhhcCCceeccccccchhhhHHhhhhhh---------ceeEEeeccCCCccCHHHHH
Q 012744 342 THPSISCFMSH----CGWNSTTEGVSNGVPFLCWPFFADQFMNTTYICDVW---------KVGLRLERNQSGIIGREEIK 408 (457)
Q Consensus 342 ~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~l---------G~g~~l~~~~~~~~~~~~l~ 408 (457)
..+++ +|.- |.-.++.||+++|+|+|+... ......+.+ - +.|..+.. -+.++++
T Consensus 365 ~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-----~d~~~la 432 (485)
T 2qzs_A 365 GGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSD-CSLENLADGVASGFVFED-----SNAWSLL 432 (485)
T ss_dssp HHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEECS-----SSHHHHH
T ss_pred HhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceecc-CccccccccccceEEECC-----CCHHHHH
Confidence 99998 7743 334688999999999998754 234444443 2 46777742 4789999
Q ss_pred HHHHHHh---CCHHHHHH
Q 012744 409 NKVDQVL---GDQNFKAR 423 (457)
Q Consensus 409 ~~i~~~l---~~~~~~~~ 423 (457)
++|.+++ +|++.+++
T Consensus 433 ~~i~~ll~~~~~~~~~~~ 450 (485)
T 2qzs_A 433 RAIRRAFVLWSRPSLWRF 450 (485)
T ss_dssp HHHHHHHHHHTSHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHH
Confidence 9999999 68765443
No 43
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.77 E-value=7.4e-07 Score=91.85 Aligned_cols=85 Identities=12% Similarity=0.112 Sum_probs=58.3
Q ss_pred cCCceeecCCC----chhhcc----CCCccceeec----cCcchhhhhhhcCCceeccccccchhhhHHhhhhhhceeEE
Q 012744 326 AARGQMISWSP----QQKVLT----HPSISCFMSH----CGWNSTTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLR 393 (457)
Q Consensus 326 ~~nv~~~~~~p----q~~ll~----~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~g~~ 393 (457)
.++|.+.++.+ +.++.. .+++ +|.- |--.++.||+++|+|+|+.. .......+.+. +.|..
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd----~GG~~EiV~dg-~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVHG-KSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEES----SBTHHHHCCBT-TTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeC----CCChHHHHccC-CcEEE
Confidence 46788877544 444443 5677 7754 33469999999999999863 34455666663 67888
Q ss_pred eeccCCCccCHHHHHHHHHHHh----CCHHHHH
Q 012744 394 LERNQSGIIGREEIKNKVDQVL----GDQNFKA 422 (457)
Q Consensus 394 l~~~~~~~~~~~~l~~~i~~~l----~~~~~~~ 422 (457)
++. -+.++++++|.+++ .|++.++
T Consensus 712 v~p-----~D~e~LA~aI~~lL~~Ll~d~~~~~ 739 (816)
T 3s28_A 712 IDP-----YHGDQAADTLADFFTKCKEDPSHWD 739 (816)
T ss_dssp ECT-----TSHHHHHHHHHHHHHHHHHCTHHHH
T ss_pred eCC-----CCHHHHHHHHHHHHHHhccCHHHHH
Confidence 753 47899999997776 7775443
No 44
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.72 E-value=1.7e-06 Score=83.24 Aligned_cols=136 Identities=9% Similarity=0.077 Sum_probs=79.7
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHhh-----cCCcEEEEEcCCCCCCCcCCCchhHHH---H--hcCC-------ceee
Q 012744 270 SVIYVAFGSHTVLEQNQFQELALGLEI-----CNRSFLWVVRPDITNDANDAYPEGFRE---R--VAAR-------GQMI 332 (457)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~---~--~~~n-------v~~~ 332 (457)
..+++..|.... .+.+..+++++.. .+.+++++..+.... ...+.+.+.+ + ..++ +.+.
T Consensus 184 ~~~il~vGr~~~--~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~--~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~ 259 (413)
T 3oy2_A 184 DVLFLNMNRNTA--RKRLDIYVLAAARFISKYPDAKVRFLCNSHHES--KFDLHSIALRELVASGVDNVFTHLNKIMINR 259 (413)
T ss_dssp SEEEECCSCSSG--GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTC--SCCHHHHHHHHHHHHTCSCHHHHHTTEEEEC
T ss_pred ceEEEEcCCCch--hcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccc--hhhHHHHHHHHHHHcCcccccccccceeecc
Confidence 367777887532 2334444444432 356777666543100 0001122222 1 2233 5566
Q ss_pred cCCCch---hhccCCCccceeec----cCcchhhhhhhcCCceeccccccchhhhHHhhhhhhce---------------
Q 012744 333 SWSPQQ---KVLTHPSISCFMSH----CGWNSTTEGVSNGVPFLCWPFFADQFMNTTYICDVWKV--------------- 390 (457)
Q Consensus 333 ~~~pq~---~ll~~~~~~~~I~H----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~--------------- 390 (457)
+|+|+. +++..+++ +|.- |.-.++.||+++|+|+|+.... .....+.+ |.
T Consensus 260 g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v~~--~~~~~i~~~~~~~~~~~ 331 (413)
T 3oy2_A 260 TVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYFSG--DCVYKIKPSAWISVDDR 331 (413)
T ss_dssp SCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHSCT--TTSEEECCCEEEECTTT
T ss_pred CcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHHcc--Ccccccccccccccccc
Confidence 999954 58888998 7742 3345899999999999986543 33444433 22
Q ss_pred -eE--EeeccCCCccCHHHHHHHHHHHhCCHHHHHH
Q 012744 391 -GL--RLERNQSGIIGREEIKNKVDQVLGDQNFKAR 423 (457)
Q Consensus 391 -g~--~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 423 (457)
|. .+.. -+.++++++| ++++|++.+++
T Consensus 332 ~G~~gl~~~-----~d~~~la~~i-~l~~~~~~~~~ 361 (413)
T 3oy2_A 332 DGIGGIEGI-----IDVDDLVEAF-TFFKDEKNRKE 361 (413)
T ss_dssp CSSCCEEEE-----CCHHHHHHHH-HHTTSHHHHHH
T ss_pred cCcceeeCC-----CCHHHHHHHH-HHhcCHHHHHH
Confidence 44 4432 3899999999 99999865443
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.54 E-value=3e-07 Score=77.20 Aligned_cols=139 Identities=8% Similarity=0.068 Sum_probs=92.2
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHhhc-CCcEEEEEcCCCCCCCcCCCchhHHH----HhcCCceeecCCCc---hhhcc
Q 012744 271 VIYVAFGSHTVLEQNQFQELALGLEIC-NRSFLWVVRPDITNDANDAYPEGFRE----RVAARGQMISWSPQ---QKVLT 342 (457)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~----~~~~nv~~~~~~pq---~~ll~ 342 (457)
.+++..|+.. ..+.+..+++++... +.+++++..+. ....+. ...+ ...+|+.+.+|+++ ..++.
T Consensus 24 ~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~----~~~~l~-~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~ 96 (177)
T 2f9f_A 24 DFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFS----KGDHAE-RYARKIMKIAPDNVKFLGSVSEEELIDLYS 96 (177)
T ss_dssp SCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCC----TTSTHH-HHHHHHHHHSCTTEEEEESCCHHHHHHHHH
T ss_pred CEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCc----cHHHHH-HHHHhhhcccCCcEEEeCCCCHHHHHHHHH
Confidence 3555677654 334566677777666 56666655433 111111 1211 13469999999997 46899
Q ss_pred CCCccceee---ccCc-chhhhhhhcCCceeccccccchhhhHHhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCCH
Q 012744 343 HPSISCFMS---HCGW-NSTTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQ 418 (457)
Q Consensus 343 ~~~~~~~I~---HgG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~ 418 (457)
.+++ +|. +.|. .++.||+++|+|+|+... ..+...+.+. +.|..+ . -+.++++++|.++++|+
T Consensus 97 ~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~-----~d~~~l~~~i~~l~~~~ 163 (177)
T 2f9f_A 97 RCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-N-----ADVNEIIDAMKKVSKNP 163 (177)
T ss_dssp HCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-C-----SCHHHHHHHHHHHHHCT
T ss_pred hCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-C-----CCHHHHHHHHHHHHhCH
Confidence 9998 776 3344 499999999999998754 4455666653 677776 3 37899999999999887
Q ss_pred HH-HHHHHHHHH
Q 012744 419 NF-KARALKLKE 429 (457)
Q Consensus 419 ~~-~~~a~~l~~ 429 (457)
+. ++++++.++
T Consensus 164 ~~~~~~~~~~a~ 175 (177)
T 2f9f_A 164 DKFKKDCFRRAK 175 (177)
T ss_dssp TTTHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 64 555554443
No 46
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.50 E-value=1.9e-05 Score=75.67 Aligned_cols=76 Identities=8% Similarity=-0.008 Sum_probs=58.7
Q ss_pred cCCceeecCCCch---hhccCCCccceee---ccC-cchhhhhh-------hcCCceeccccccchhhhHHhhhhhhcee
Q 012744 326 AARGQMISWSPQQ---KVLTHPSISCFMS---HCG-WNSTTEGV-------SNGVPFLCWPFFADQFMNTTYICDVWKVG 391 (457)
Q Consensus 326 ~~nv~~~~~~pq~---~ll~~~~~~~~I~---HgG-~~s~~eal-------~~GvP~l~~P~~~DQ~~na~~v~~~lG~g 391 (457)
.+||.+.+++|+. +++..+++ +|. +-| -+++.||+ ++|+|+|+... +.+. ..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cce
Confidence 5788899999865 57899998 664 234 35788999 99999998754 5553 567
Q ss_pred EE-eeccCCCccCHHHHHHHHHHHhCCHH
Q 012744 392 LR-LERNQSGIIGREEIKNKVDQVLGDQN 419 (457)
Q Consensus 392 ~~-l~~~~~~~~~~~~l~~~i~~~l~~~~ 419 (457)
.. +.. -+.++++++|.++++|+.
T Consensus 331 ~l~v~~-----~d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 331 RFGYTP-----GNADSVIAAITQALEAPR 354 (406)
T ss_dssp EEEECT-----TCHHHHHHHHHHHHHCCC
T ss_pred EEEeCC-----CCHHHHHHHHHHHHhCcc
Confidence 76 642 478999999999998875
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.50 E-value=3.8e-05 Score=72.61 Aligned_cols=92 Identities=12% Similarity=0.177 Sum_probs=63.4
Q ss_pred CceeecCCCc-hhhccCCCccceeec-----cCcchhhhhhhcCCceeccccccchhhhHHhhhhhhceeEEeeccCCCc
Q 012744 328 RGQMISWSPQ-QKVLTHPSISCFMSH-----CGWNSTTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLRLERNQSGI 401 (457)
Q Consensus 328 nv~~~~~~pq-~~ll~~~~~~~~I~H-----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~ 401 (457)
++.+.++... ..+++.+++ ++.- +|..++.||+++|+|+|+-|...+.......+.+. |.++...
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~------ 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK------ 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC------
Confidence 4555555443 368888887 6642 23478999999999999877666666555554443 7766552
Q ss_pred cCHHHHHHHHHHHhCCHH----HHHHHHHHHHH
Q 012744 402 IGREEIKNKVDQVLGDQN----FKARALKLKEK 430 (457)
Q Consensus 402 ~~~~~l~~~i~~~l~~~~----~~~~a~~l~~~ 430 (457)
+.++|+++|.++++| + +.+++++..++
T Consensus 332 -d~~~La~ai~~ll~d-~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 332 -NETELVTKLTELLSV-KKEIKVEEKSREIKGC 362 (374)
T ss_dssp -SHHHHHHHHHHHHHS-CCCCCHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHh
Confidence 679999999999987 5 45555554444
No 48
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.94 E-value=0.00032 Score=65.44 Aligned_cols=105 Identities=18% Similarity=0.124 Sum_probs=74.2
Q ss_pred CCCEEEEEcCCCCcChHHHHHHHHHHHhC--CCeEEEEeCCcchhHHHhhhcCCCCCCCCeE-EEecCCCCCCCCCcchH
Q 012744 2 SSPHVVVIPNPEQGHVIPLLELSQNLAKH--GLRITFVNSEYNHKRVLESLEGKNYIGEQIH-LVSIPDGMEPWDDRSDM 78 (457)
Q Consensus 2 ~~~~vl~~~~~~~GH~~p~~~la~~L~~~--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 78 (457)
+.+||+++-..+.|++.-+.++.++|+++ +.+|++++.+.+.+.+... ++++ ++.++.. ..
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~--------p~vd~vi~~~~~-------~~- 70 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN--------PNIDELIVVDKK-------GR- 70 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC--------TTCSEEEEECCS-------SH-
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CCccEEEEeCcc-------cc-
Confidence 46799999999999999999999999987 8999999999988777655 4564 4454421 00
Q ss_pred HHHHHHHHHhcchHHHHHHHHHhcCCCCCe-eEEEecCCcchHHHHHHHcCCceEE
Q 012744 79 RKLLEKRLQVMPGKLEGLIEEIHGREGEKT-ACLIADGAAGWAIEVAEKMKLRRAV 133 (457)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-D~vv~D~~~~~~~~~A~~lgiP~v~ 133 (457)
.. .+ ..+.+++..|++ .+| |++|.=....-...++...|+|...
T Consensus 71 ~~---~~-----~~~~~l~~~Lr~---~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 71 HN---SI-----SGLNEVAREINA---KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp HH---HH-----HHHHHHHHHHHH---HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred cc---cH-----HHHHHHHHHHhh---CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 01 11 122344555555 689 9988655555566678888998655
No 49
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.85 E-value=0.00031 Score=72.10 Aligned_cols=141 Identities=13% Similarity=0.166 Sum_probs=93.8
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHH------hcCCceeecCCCchh---
Q 012744 269 NSVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRER------VAARGQMISWSPQQK--- 339 (457)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~------~~~nv~~~~~~pq~~--- 339 (457)
..+||.+|....+..++.+..-.+.|.+.+..++|..... ......+.+. .++++.+.+..|..+
T Consensus 522 ~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~------~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~ 595 (723)
T 4gyw_A 522 DAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFP------AVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVR 595 (723)
T ss_dssp TSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETT------GGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHH
T ss_pred CCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCc------HHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHH
Confidence 4599999999989999999999999999998888887654 1111222221 135677778888654
Q ss_pred hccCCCccceee---ccCcchhhhhhhcCCceecccccc-chhhhHHhhhhhhceeEEeeccCCCccCHHHHHHHHHHHh
Q 012744 340 VLTHPSISCFMS---HCGWNSTTEGVSNGVPFLCWPFFA-DQFMNTTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVL 415 (457)
Q Consensus 340 ll~~~~~~~~I~---HgG~~s~~eal~~GvP~l~~P~~~-DQ~~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l 415 (457)
.+..+|+ ++- .+|.+|++|||++|||+|.+|-.. =...-+-.+.. +|+...+. -+.++-.+.--++-
T Consensus 596 ~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~-~gl~e~ia------~~~~~Y~~~a~~la 666 (723)
T 4gyw_A 596 RGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTC-LGCLELIA------KNRQEYEDIAVKLG 666 (723)
T ss_dssp HGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHH-HTCGGGBC------SSHHHHHHHHHHHH
T ss_pred HhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHH-cCCccccc------CCHHHHHHHHHHHh
Confidence 5566666 765 899999999999999999999532 22223333344 56665543 24455444444666
Q ss_pred CCHHHHHHH
Q 012744 416 GDQNFKARA 424 (457)
Q Consensus 416 ~~~~~~~~a 424 (457)
+|++.++..
T Consensus 667 ~d~~~l~~l 675 (723)
T 4gyw_A 667 TDLEYLKKV 675 (723)
T ss_dssp HCHHHHHHH
T ss_pred cCHHHHHHH
Confidence 676544433
No 50
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.84 E-value=0.00014 Score=59.78 Aligned_cols=129 Identities=10% Similarity=0.173 Sum_probs=77.5
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHhhcC----CcEEEEEcCCCCCCCcCCCchhHHH---HhcCCceeecCCCch---h
Q 012744 270 SVIYVAFGSHTVLEQNQFQELALGLEICN----RSFLWVVRPDITNDANDAYPEGFRE---RVAARGQMISWSPQQ---K 339 (457)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~nv~~~~~~pq~---~ 339 (457)
+++++..|+.. ..+.+..+++++.... .+++++..+. ..+.+.+ +.+-++.+ +|+|+. .
T Consensus 2 ~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~--------~~~~~~~~~~~~~~~v~~-g~~~~~~~~~ 70 (166)
T 3qhp_A 2 PFKIAMVGRYS--NEKNQSVLIKAVALSKYKQDIVLLLKGKGP--------DEKKIKLLAQKLGVKAEF-GFVNSNELLE 70 (166)
T ss_dssp CEEEEEESCCS--TTTTHHHHHHHHHTCTTGGGEEEEEECCST--------THHHHHHHHHHHTCEEEC-CCCCHHHHHH
T ss_pred ceEEEEEeccc--hhcCHHHHHHHHHHhccCCCeEEEEEeCCc--------cHHHHHHHHHHcCCeEEE-eecCHHHHHH
Confidence 46778888764 2344556666665542 3333333221 1222222 23347778 999865 5
Q ss_pred hccCCCccceeec----cCcchhhhhhhcCC-ceeccccccchhhhHHhhhhhhceeEEeeccCCCccCHHHHHHHHHHH
Q 012744 340 VLTHPSISCFMSH----CGWNSTTEGVSNGV-PFLCWPFFADQFMNTTYICDVWKVGLRLERNQSGIIGREEIKNKVDQV 414 (457)
Q Consensus 340 ll~~~~~~~~I~H----gG~~s~~eal~~Gv-P~l~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~ 414 (457)
++..+++ +|.- |.-.++.||+++|+ |+|+.... ......+.+. +. .+. .-+.+++.++|.++
T Consensus 71 ~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~---~~~~~~~~~~-~~--~~~-----~~~~~~l~~~i~~l 137 (166)
T 3qhp_A 71 ILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPL---SATRQFALDE-RS--LFE-----PNNAKDLSAKIDWW 137 (166)
T ss_dssp HHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTT---CGGGGGCSSG-GG--EEC-----TTCHHHHHHHHHHH
T ss_pred HHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCC---CchhhhccCC-ce--EEc-----CCCHHHHHHHHHHH
Confidence 8999998 7752 33469999999996 99983321 1122222331 33 232 24889999999999
Q ss_pred hCCHHHHH
Q 012744 415 LGDQNFKA 422 (457)
Q Consensus 415 l~~~~~~~ 422 (457)
++|++.++
T Consensus 138 ~~~~~~~~ 145 (166)
T 3qhp_A 138 LENKLERE 145 (166)
T ss_dssp HHCHHHHH
T ss_pred HhCHHHHH
Confidence 99985433
No 51
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.84 E-value=0.00011 Score=72.33 Aligned_cols=140 Identities=9% Similarity=0.052 Sum_probs=93.7
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEE--EcCCCCCCCcCCCchhHHH-----HhcCCceeecCCCchh---
Q 012744 270 SVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWV--VRPDITNDANDAYPEGFRE-----RVAARGQMISWSPQQK--- 339 (457)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~-----~~~~nv~~~~~~pq~~--- 339 (457)
.++|.+|+...+..++.+....+.+.+.+..++|. .+.. ......+.+ .+.+++.+.+.+|+.+
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~------~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la 514 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQS------NGITHPYVERFIKSYLGDSATAHPHSPYHQYLR 514 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSC------CGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCC------chhhHHHHHHHHHcCCCccEEEcCCCCHHHHHH
Confidence 58999999988888999888888888888777764 3321 111112221 1446777788888764
Q ss_pred hccCCCccceee---ccCcchhhhhhhcCCceeccccccc-hhhhHHhhhhhhceeEE-eeccCCCccCHHHHHHHHHHH
Q 012744 340 VLTHPSISCFMS---HCGWNSTTEGVSNGVPFLCWPFFAD-QFMNTTYICDVWKVGLR-LERNQSGIIGREEIKNKVDQV 414 (457)
Q Consensus 340 ll~~~~~~~~I~---HgG~~s~~eal~~GvP~l~~P~~~D-Q~~na~~v~~~lG~g~~-l~~~~~~~~~~~~l~~~i~~~ 414 (457)
.+..+|+ ++. .+|.+|++||+++|||+|+++-..= ...-+..+.. .|+... +. -+.++..+...++
T Consensus 515 ~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA------~d~eeYv~~Av~L 585 (631)
T 3q3e_A 515 ILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIA------NTVDEYVERAVRL 585 (631)
T ss_dssp HHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEE------SSHHHHHHHHHHH
T ss_pred HHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceec------CCHHHHHHHHHHH
Confidence 5578887 653 3788999999999999999875421 1222222333 466542 32 2678888888899
Q ss_pred hCCHHHHHHH
Q 012744 415 LGDQNFKARA 424 (457)
Q Consensus 415 l~~~~~~~~a 424 (457)
.+|++.++..
T Consensus 586 a~D~~~l~~L 595 (631)
T 3q3e_A 586 AENHQERLEL 595 (631)
T ss_dssp HHCHHHHHHH
T ss_pred hCCHHHHHHH
Confidence 9898654443
No 52
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.69 E-value=0.00075 Score=57.23 Aligned_cols=82 Identities=9% Similarity=-0.001 Sum_probs=62.2
Q ss_pred Ccee-ecCCCch---hhccCCCccceeecc---C-cchhhhhhhcCCceeccccccchhhhHHhhhhhhceeEEeeccCC
Q 012744 328 RGQM-ISWSPQQ---KVLTHPSISCFMSHC---G-WNSTTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLRLERNQS 399 (457)
Q Consensus 328 nv~~-~~~~pq~---~ll~~~~~~~~I~Hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~ 399 (457)
++.+ .+++++. .++..+++ +|... | ..++.||+++|+|+|+.... .....+ .. +.|..+..
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~-~~-~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-TN-ETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC-CT-TTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc-CC-CceEEecC---
Confidence 8988 9999854 68999998 77543 3 46889999999999987543 345555 53 67777742
Q ss_pred CccCHHHHHHHHHHHhC-CHHHHH
Q 012744 400 GIIGREEIKNKVDQVLG-DQNFKA 422 (457)
Q Consensus 400 ~~~~~~~l~~~i~~~l~-~~~~~~ 422 (457)
-+.+++.++|.++++ |++.++
T Consensus 165 --~~~~~l~~~i~~l~~~~~~~~~ 186 (200)
T 2bfw_A 165 --GDPGELANAILKALELSRSDLS 186 (200)
T ss_dssp --TCHHHHHHHHHHHHHCCHHHHH
T ss_pred --CCHHHHHHHHHHHHhcCHHHHH
Confidence 478999999999999 885433
No 53
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.68 E-value=0.0037 Score=58.13 Aligned_cols=103 Identities=11% Similarity=0.061 Sum_probs=69.2
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhC--CCeEEEEeCCcchhHHHhhhcCCCCCCCCe-EEEecCCCCCCCCCcchHHH
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKH--GLRITFVNSEYNHKRVLESLEGKNYIGEQI-HLVSIPDGMEPWDDRSDMRK 80 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 80 (457)
|||+++...+.|++.-..++.++|+++ +.+|++++.+.+.+.+... +.+ +++.++.. . ..
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~--------p~i~~v~~~~~~--~--~~----- 63 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM--------PEVNEAIPMPLG--H--GA----- 63 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC--------TTEEEEEEC---------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC--------CccCEEEEecCC--c--cc-----
Confidence 589999988889999999999999987 9999999998887766544 355 34444311 0 00
Q ss_pred HHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHcCCceEE
Q 012744 81 LLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAGWAIEVAEKMKLRRAV 133 (457)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~ 133 (457)
.......++.+.+++ .+||++|.=........++...|+|...
T Consensus 64 -------~~~~~~~~l~~~l~~---~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 64 -------LEIGERRKLGHSLRE---KRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp --------CHHHHHHHHHHTTT---TTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred -------cchHHHHHHHHHHHh---cCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 001233456666665 7899988322233556677888999744
No 54
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.29 E-value=0.00032 Score=64.93 Aligned_cols=145 Identities=11% Similarity=0.044 Sum_probs=97.4
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchh---hccCCCcc
Q 012744 271 VIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQK---VLTHPSIS 347 (457)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~---ll~~~~~~ 347 (457)
.+++-.|+.+. .+.+. .+ ..+.+++++..+. .. . .+ ||...+|+|+.+ +|+.++.+
T Consensus 179 ~~i~yaG~l~k--~~~L~----~l-~~~~~f~ivG~G~-----~~----~----l~-nV~f~G~~~~~el~~~l~~~~~~ 237 (339)
T 3rhz_A 179 REIHFPGNPER--FSFVK----EW-KYDIPLKVYTWQN-----VE----L----PQ-NVHKINYRPDEQLLMEMSQGGFG 237 (339)
T ss_dssp EEEEECSCTTT--CGGGG----GC-CCSSCEEEEESCC-----CC----C----CT-TEEEEECCCHHHHHHHHHTEEEE
T ss_pred cEEEEeCCcch--hhHHH----hC-CCCCeEEEEeCCc-----cc----C----cC-CEEEeCCCCHHHHHHHHHhCCEE
Confidence 56667787763 22222 12 2456666665544 11 1 24 899999999876 45555664
Q ss_pred ceeeccCc---------chhhhhhhcCCceeccccccchhhhHHhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCCH
Q 012744 348 CFMSHCGW---------NSTTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQ 418 (457)
Q Consensus 348 ~~I~HgG~---------~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~ 418 (457)
.+.+-+.. +-+.|++++|+|+|+.+ ...++..+.+. |+|+.++ +.+++.++|..+..+.
T Consensus 238 lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~-------~~~e~~~~i~~l~~~~ 305 (339)
T 3rhz_A 238 LVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK-------DVEEAIMKVKNVNEDE 305 (339)
T ss_dssp ECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES-------SHHHHHHHHHHCCHHH
T ss_pred EEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC-------CHHHHHHHHHHhCHHH
Confidence 44422322 34789999999999755 45677888885 9999883 4689999998875433
Q ss_pred --HHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHH
Q 012744 419 --NFKARALKLKEKALSSVREGGSSNKAIQNFVQSI 452 (457)
Q Consensus 419 --~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 452 (457)
.+++|+++.+++++. +...++++.+.+.+|
T Consensus 306 ~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 306 YIELVKNVRSFNPILRK----GFFTRRLLTESVFQA 337 (339)
T ss_dssp HHHHHHHHHHHTHHHHT----THHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHh
Confidence 578889888888876 667777777776655
No 55
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=97.15 E-value=0.052 Score=49.74 Aligned_cols=46 Identities=15% Similarity=0.191 Sum_probs=41.3
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhC--CCeEEEEeCCcchhHHHhh
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKH--GLRITFVNSEYNHKRVLES 49 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~--Gh~Vt~~~~~~~~~~~~~~ 49 (457)
|||+++-..+.|++.-..++.++|+++ +.+|++++.+.+.+.+...
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~ 48 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWH 48 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHTS
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhcC
Confidence 589999999999999999999999987 8999999999988877655
No 56
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=96.25 E-value=0.0046 Score=59.03 Aligned_cols=84 Identities=14% Similarity=0.019 Sum_probs=58.2
Q ss_pred CCceeecCCCch---hhccCCCccceeecc---Cc-chhhhhhhcCCceeccccccchhhhHHhhhhhhceeEEeeccCC
Q 012744 327 ARGQMISWSPQQ---KVLTHPSISCFMSHC---GW-NSTTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLRLERNQS 399 (457)
Q Consensus 327 ~nv~~~~~~pq~---~ll~~~~~~~~I~Hg---G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~ 399 (457)
.+|.+.+++|+. +++..+++ ||.-. |. .++.||+++|+|+|+- ... ....+... ..|+.++.
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g----~~e~v~~~-~~G~lv~~--- 363 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVITN-KYE----NKDLSNWH-SNIVSLEQ--- 363 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEEE-CBT----TBCGGGTB-TTEEEESS---
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEEe-CCC----cchhhhcC-CCEEEeCC---
Confidence 578888999875 58889999 77532 33 5689999999999972 221 12344442 46777743
Q ss_pred CccCHHHHHHHHHHHhCCHHHHHH
Q 012744 400 GIIGREEIKNKVDQVLGDQNFKAR 423 (457)
Q Consensus 400 ~~~~~~~l~~~i~~~l~~~~~~~~ 423 (457)
-+.++++++|.++++|++.+++
T Consensus 364 --~d~~~la~ai~~ll~~~~~~~~ 385 (413)
T 2x0d_A 364 --LNPENIAETLVELCMSFNNRDV 385 (413)
T ss_dssp --CSHHHHHHHHHHHHHHTC----
T ss_pred --CCHHHHHHHHHHHHcCHHHHHH
Confidence 4889999999999988866555
No 57
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=94.14 E-value=0.41 Score=47.13 Aligned_cols=131 Identities=9% Similarity=0.107 Sum_probs=76.3
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHH---hhcCCcEEEEEcCCCCCCCcCCCchh---HHHHhcCCceeecCCCch---hhc
Q 012744 271 VIYVAFGSHTVLEQNQFQELALGL---EICNRSFLWVVRPDITNDANDAYPEG---FRERVAARGQMISWSPQQ---KVL 341 (457)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~---~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~nv~~~~~~pq~---~ll 341 (457)
++++..|... +.+.+..+++++ .+.+.+++++..++ ...... .....+.++.+....+.. .++
T Consensus 328 p~i~~vgRl~--~~Kg~~~li~a~~~l~~~~~~l~l~G~G~------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 399 (536)
T 3vue_A 328 PLIAFIGRLE--EQKGPDVMAAAIPELMQEDVQIVLLGTGK------KKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIM 399 (536)
T ss_dssp CEEEEECCBS--GGGCHHHHHHHHHHHTTSSCEEEEECCBC------HHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHH
T ss_pred cEEEEEeecc--ccCChHHHHHHHHHhHhhCCeEEEEeccC------chHHHHHHHHHhhcCCceEEEEeccHHHHHHHH
Confidence 4566677653 223344445554 44466666655443 111111 222346788887777654 478
Q ss_pred cCCCccceeecc---Cc-chhhhhhhcCCceeccccccchhhhHHhhhhhhceeEEeeccC-C----CccCHHHHHHHHH
Q 012744 342 THPSISCFMSHC---GW-NSTTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLRLERNQ-S----GIIGREEIKNKVD 412 (457)
Q Consensus 342 ~~~~~~~~I~Hg---G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~g~~l~~~~-~----~~~~~~~l~~~i~ 412 (457)
+.+++ ||.-. |. .+++||+++|+|+|+.... -....|.+. .-|....... + ...+.++|+++|+
T Consensus 400 ~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~ 472 (536)
T 3vue_A 400 AGADV--LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLK 472 (536)
T ss_dssp HHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHH
T ss_pred Hhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCCC----CchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHH
Confidence 88888 87642 33 4889999999999986543 344555552 4555433210 0 1235788999998
Q ss_pred HHhC
Q 012744 413 QVLG 416 (457)
Q Consensus 413 ~~l~ 416 (457)
+++.
T Consensus 473 ral~ 476 (536)
T 3vue_A 473 RAIK 476 (536)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8774
No 58
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=90.86 E-value=2.8 Score=37.86 Aligned_cols=98 Identities=13% Similarity=0.085 Sum_probs=57.7
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchh--------------HHHhhhcCCCCCCCCeEEEecC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHK--------------RVLESLEGKNYIGEQIHLVSIP 66 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~ 66 (457)
|+++||+|+-.+. -.....++|.++||+|..+.+...+. ...+. |+.+.. |
T Consensus 5 ~~~mrivf~Gt~~-----fa~~~L~~L~~~~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~---------gIpv~~-~ 69 (318)
T 3q0i_A 5 SQSLRIVFAGTPD-----FAARHLAALLSSEHEIIAVYTQPERPAGRGKKLTASPVKTLALEH---------NVPVYQ-P 69 (318)
T ss_dssp --CCEEEEECCSH-----HHHHHHHHHHTSSSEEEEEECCCC---------CCCHHHHHHHHT---------TCCEEC-C
T ss_pred ccCCEEEEEecCH-----HHHHHHHHHHHCCCcEEEEEcCCCCcccccccCCCCHHHHHHHHc---------CCCEEc-c
Confidence 5689999997653 23455688888999998887744322 22222 444432 1
Q ss_pred CCCCCCCCcchHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc-hHHHHHHHcCCceEEEechh
Q 012744 67 DGMEPWDDRSDMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG-WAIEVAEKMKLRRAVVVITS 138 (457)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 138 (457)
..+ . + .++++.+++ .+||++|+=.+.. ....+-+.....++.++++.
T Consensus 70 ~~~----~--~----------------~~~~~~l~~---~~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHpSl 117 (318)
T 3q0i_A 70 ENF----K--S----------------DESKQQLAA---LNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSI 117 (318)
T ss_dssp SCS----C--S----------------HHHHHHHHT---TCCSEEEESSCCSCCCHHHHTSSTTCEEEEESSS
T ss_pred CcC----C--C----------------HHHHHHHHh---cCCCEEEEeCccccCCHHHHhhCcCCEEEeCCcc
Confidence 111 0 0 123444444 8999999876543 44555566666689988875
No 59
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=90.30 E-value=1.6 Score=39.67 Aligned_cols=103 Identities=11% Similarity=0.011 Sum_probs=60.4
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc--------chhHHHhhhcCCCCCCCCeEEEecCCCCCCC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY--------NHKRVLESLEGKNYIGEQIHLVSIPDGMEPW 72 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (457)
|.++||+|+. + -+-...+.++|.++||+|..+.+.. ......+. |+.+...+. +...
T Consensus 20 ~~~mrIvf~G---~--~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~---------gIpv~~~~~-~~~~ 84 (329)
T 2bw0_A 20 FQSMKIAVIG---Q--SLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKD---------GVPVFKYSR-WRAK 84 (329)
T ss_dssp -CCCEEEEEC---C--HHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHH---------TCCEEECSC-CEET
T ss_pred CCCCEEEEEc---C--cHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHc---------CCCEEecCc-cccc
Confidence 5679999992 1 1333456789999999998776521 12233333 566555431 1000
Q ss_pred CCcchHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc-hHHHHHHHcCCceEEEechh
Q 012744 73 DDRSDMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG-WAIEVAEKMKLRRAVVVITS 138 (457)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 138 (457)
... ..++++.+++ .+||++|+=.+.. ....+-+.....++.++++.
T Consensus 85 --------------~~~---~~~~~~~l~~---~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSL 131 (329)
T 2bw0_A 85 --------------GQA---LPDVVAKYQA---LGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSL 131 (329)
T ss_dssp --------------TEE---CHHHHHHHHT---TCCSEEEESSCSSCCCHHHHTCSTTCEEEEESSC
T ss_pred --------------ccc---cHHHHHHHHh---cCCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCc
Confidence 011 1234444444 8999998876643 55556666677889988876
No 60
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=90.28 E-value=0.67 Score=40.25 Aligned_cols=41 Identities=15% Similarity=0.094 Sum_probs=30.7
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhH
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKR 45 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~ 45 (457)
+||||+..=-+. |.--+.+|+++|.+ +|+|+++.+...+..
T Consensus 11 ~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg 51 (261)
T 3ty2_A 11 KLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSG 51 (261)
T ss_dssp CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTT
T ss_pred CCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcC
Confidence 578877664444 44558899999976 899999998776543
No 61
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=90.17 E-value=0.56 Score=36.60 Aligned_cols=44 Identities=11% Similarity=0.126 Sum_probs=38.7
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHK 44 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~ 44 (457)
|++.+|++.+.++-+|-....-++..|..+|++|..+......+
T Consensus 1 ~~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e 44 (137)
T 1ccw_A 1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQE 44 (137)
T ss_dssp CCCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHH
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHH
Confidence 78899999999999999999999999999999999887644433
No 62
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=89.79 E-value=1.8 Score=37.44 Aligned_cols=113 Identities=13% Similarity=0.108 Sum_probs=62.2
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcchHHHHHH
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSDMRKLLE 83 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (457)
||||+..=-+. |.--+.+|+++|.+.| +|+++.+...+...... ......+++..+..+.. ..-...+.....
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~s----it~~~pl~~~~~~~~~~-~~v~GTPaDCV~ 74 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHS----LTFTEPLKMRKIDTDFY-TVIDGTPADCVH 74 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCS----CCCSSCEEEEEEETTEE-EETTCCHHHHHH
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccc----eecCCCeEEEEecCCCe-EEECCCHHHHHH
Confidence 56666554333 4445889999999988 99999987765433221 11222455555433210 001112222222
Q ss_pred HHHHhcchHHHHHHHHHhcCCCCCeeEEEe----------cCCcc---hHHHHHHHcCCceEEEec
Q 012744 84 KRLQVMPGKLEGLIEEIHGREGEKTACLIA----------DGAAG---WAIEVAEKMKLRRAVVVI 136 (457)
Q Consensus 84 ~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~----------D~~~~---~~~~~A~~lgiP~v~~~~ 136 (457)
..+. .++.. .+||+||+ |.+++ .|+.-|..+|||.|.++-
T Consensus 75 lal~-------~l~~~------~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 75 LGYR-------VILEE------KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HHHH-------TTTTT------CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHH-------HhcCC------CCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 2211 11111 57999997 43444 445556778999999875
No 63
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=89.56 E-value=1.8 Score=41.88 Aligned_cols=107 Identities=15% Similarity=0.147 Sum_probs=69.8
Q ss_pred ce-eecCCCch---hhccCCCccceee---ccCcc-hhhhhhhcCC-----ceeccccccchhhhHHhhhhhhceeEEee
Q 012744 329 GQ-MISWSPQQ---KVLTHPSISCFMS---HCGWN-STTEGVSNGV-----PFLCWPFFADQFMNTTYICDVWKVGLRLE 395 (457)
Q Consensus 329 v~-~~~~~pq~---~ll~~~~~~~~I~---HgG~~-s~~eal~~Gv-----P~l~~P~~~DQ~~na~~v~~~lG~g~~l~ 395 (457)
+. +.+++++. .++..+++ ||. .=|+| ++.|++++|+ |+|+.-+.+ .+.. +.-|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~----l~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANE----LTSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGT----CTTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHH----hCCeEEEC
Confidence 44 34788876 47888998 775 34664 8899999998 666654322 1111 22355564
Q ss_pred ccCCCccCHHHHHHHHHHHhCCH-H-HHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHhcC
Q 012744 396 RNQSGIIGREEIKNKVDQVLGDQ-N-FKARALKLKEKALSSVREGGSSNKAIQNFVQSIKQW 455 (457)
Q Consensus 396 ~~~~~~~~~~~l~~~i~~~l~~~-~-~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 455 (457)
. .+.++++++|.++|+++ . -+++.++..+.+++ -+.....+.+++.+.+.
T Consensus 403 p-----~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 P-----YDRDEVAAALDRALTMSLAERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp T-----TCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred C-----CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 3 57899999999999853 3 34444555555443 36667777888877654
No 64
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=89.42 E-value=1.3 Score=42.74 Aligned_cols=107 Identities=8% Similarity=-0.010 Sum_probs=73.5
Q ss_pred CceeecCCCch---hhccCCCccceee---ccCcch-hhhhhhcC---CceeccccccchhhhHHhhhhhhc-eeEEeec
Q 012744 328 RGQMISWSPQQ---KVLTHPSISCFMS---HCGWNS-TTEGVSNG---VPFLCWPFFADQFMNTTYICDVWK-VGLRLER 396 (457)
Q Consensus 328 nv~~~~~~pq~---~ll~~~~~~~~I~---HgG~~s-~~eal~~G---vP~l~~P~~~DQ~~na~~v~~~lG-~g~~l~~ 396 (457)
.|.+.+.+|+. .++..+++ ++. .=|+|. ..|++++| .|+|+--+.+ .+.. +| -|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~----l~~~allVnP 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEV----LGEYCRSVNP 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHH----HGGGSEEECT
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHH----hCCCEEEECC
Confidence 46666788864 57888888 664 458874 58999996 5665543332 2222 33 4677743
Q ss_pred cCCCccCHHHHHHHHHHHhCCH--HHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHhc
Q 012744 397 NQSGIIGREEIKNKVDQVLGDQ--NFKARALKLKEKALSSVREGGSSNKAIQNFVQSIKQ 454 (457)
Q Consensus 397 ~~~~~~~~~~l~~~i~~~l~~~--~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 454 (457)
.+.++++++|.++|+++ +-+++.+++.+.+.+ -+...-.+.|+..|..
T Consensus 423 -----~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 423 -----FDLVEQAEAISAALAAGPRQRAEAAARRRDAARP-----WTLEAWVQAQLDGLAA 472 (496)
T ss_dssp -----TBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhh
Confidence 68999999999999865 456666666666654 5667778888888763
No 65
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=89.05 E-value=4 Score=34.55 Aligned_cols=103 Identities=9% Similarity=0.071 Sum_probs=61.6
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCC--eEEEEeCCc-c---hhHHHhhhcCCCCCCCCeEEEecCCC-CCCCCCcc
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGL--RITFVNSEY-N---HKRVLESLEGKNYIGEQIHLVSIPDG-MEPWDDRS 76 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh--~Vt~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 76 (457)
+||+|+..|+.+ -+.++.++|.+.+| +|..+.+.. . .+...+. |+.+..++.. +..
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~---------gIp~~~~~~~~~~~----- 64 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKH---------NVECKVIQRKEFPS----- 64 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHH---------TCCEEECCGGGSSS-----
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHc---------CCCEEEeCcccccc-----
Confidence 478888777653 46778888888888 776555433 2 2233444 6776665421 100
Q ss_pred hHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc-hHHHHHHHcCCceEEEechh
Q 012744 77 DMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG-WAIEVAEKMKLRRAVVVITS 138 (457)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 138 (457)
.....+ ++++.+++ .++|+||+=.+.. ....+-+.....++.++++.
T Consensus 65 ---------r~~~~~---~~~~~l~~---~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSL 112 (216)
T 2ywr_A 65 ---------KKEFEE---RMALELKK---KGVELVVLAGFMRILSHNFLKYFPNKVINIHPSL 112 (216)
T ss_dssp ---------HHHHHH---HHHHHHHH---TTCCEEEESSCCSCCCHHHHTTSTTCEEEEESSC
T ss_pred ---------hhhhhH---HHHHHHHh---cCCCEEEEeCchhhCCHHHHhhccCCeEEEcCCc
Confidence 011112 23334443 8999999876643 55666677777889987764
No 66
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=88.76 E-value=3.9 Score=33.90 Aligned_cols=97 Identities=7% Similarity=0.056 Sum_probs=62.5
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcc------hhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcc
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYN------HKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRS 76 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (457)
+-.|++++..+.|=-...+.+|-+.+.+|++|.|+..-.. ...+... ++.++....++.. ...
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L---------~v~~~~~g~gf~~--~~~ 96 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH---------GVEFQVMATGFTW--ETQ 96 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG---------TCEEEECCTTCCC--CGG
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC---------CcEEEEccccccc--CCC
Confidence 4578888988999999999999999999999999954332 1233332 5777777664432 221
Q ss_pred hHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCc
Q 012744 77 DMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAA 117 (457)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~ 117 (457)
+.... .......+....+.+.. .++|+||.|...
T Consensus 97 ~~~~~----~~~a~~~l~~a~~~l~~---~~yDlvILDEi~ 130 (196)
T 1g5t_A 97 NREAD----TAACMAVWQHGKRMLAD---PLLDMVVLDELT 130 (196)
T ss_dssp GHHHH----HHHHHHHHHHHHHHTTC---TTCSEEEEETHH
T ss_pred CcHHH----HHHHHHHHHHHHHHHhc---CCCCEEEEeCCC
Confidence 21111 11123344455555444 789999999764
No 67
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=87.14 E-value=2 Score=37.20 Aligned_cols=35 Identities=17% Similarity=0.264 Sum_probs=27.3
Q ss_pred CEEEEEcCC--CCcChHHHHHHHHHHHhCCCeEEEEe
Q 012744 4 PHVVVIPNP--EQGHVIPLLELSQNLAKHGLRITFVN 38 (457)
Q Consensus 4 ~~vl~~~~~--~~GH~~p~~~la~~L~~~Gh~Vt~~~ 38 (457)
++.+|++.. ..|=-.-...|++.|+++|++|.++=
T Consensus 21 ~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 21 GHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 455555543 33778889999999999999999984
No 68
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=86.75 E-value=3.3 Score=41.45 Aligned_cols=46 Identities=17% Similarity=0.202 Sum_probs=34.1
Q ss_pred CCceee---cCCCch---------hhccCCCccceeecc---Cc-chhhhhhhcCCceeccccc
Q 012744 327 ARGQMI---SWSPQQ---------KVLTHPSISCFMSHC---GW-NSTTEGVSNGVPFLCWPFF 374 (457)
Q Consensus 327 ~nv~~~---~~~pq~---------~ll~~~~~~~~I~Hg---G~-~s~~eal~~GvP~l~~P~~ 374 (457)
++|+++ .|++.. +++..|++ ||.-. |+ .+.+||+++|+|+|+.-..
T Consensus 490 drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 490 DRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp CSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred CceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 566643 788764 47888998 77654 33 5899999999999986543
No 69
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=86.14 E-value=2.7 Score=33.67 Aligned_cols=109 Identities=10% Similarity=0.121 Sum_probs=65.1
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcchHHHHH
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSDMRKLL 82 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (457)
+.+|++.+.++-.|-....-++..|..+|++|.++......+.+...... .+.+.+.++-...
T Consensus 18 ~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~-----~~~diV~lS~~~~------------ 80 (161)
T 2yxb_A 18 RYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQ-----EDVDVIGVSILNG------------ 80 (161)
T ss_dssp SCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHH-----TTCSEEEEEESSS------------
T ss_pred CCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHh-----cCCCEEEEEeech------------
Confidence 57999999999999999999999999999999998764443333222111 1444444432111
Q ss_pred HHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHcCCceEE
Q 012744 83 EKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAGWAIEVAEKMKLRRAV 133 (457)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~ 133 (457)
.....+.++++.+++.+..+.-++|.-.....-...++..|+-.+.
T Consensus 81 -----~~~~~~~~~i~~L~~~g~~~i~v~vGG~~~~~~~~~l~~~G~d~v~ 126 (161)
T 2yxb_A 81 -----AHLHLMKRLMAKLRELGADDIPVVLGGTIPIPDLEPLRSLGIREIF 126 (161)
T ss_dssp -----CHHHHHHHHHHHHHHTTCTTSCEEEEECCCHHHHHHHHHTTCCEEE
T ss_pred -----hhHHHHHHHHHHHHhcCCCCCEEEEeCCCchhcHHHHHHCCCcEEE
Confidence 1112345555555553201344666654333334446788887443
No 70
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=86.13 E-value=3.8 Score=34.43 Aligned_cols=106 Identities=11% Similarity=0.041 Sum_probs=62.6
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCC--CeEEEEeCCc-c---hhHHHhhhcCCCCCCCCeEEEecCCC-CCCCC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHG--LRITFVNSEY-N---HKRVLESLEGKNYIGEQIHLVSIPDG-MEPWD 73 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~G--h~Vt~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 73 (457)
|.|+||+++..|..+- +.+|.+++.+.+ ++|..+.+.. . .+...+. |+.+..++.. +..
T Consensus 5 m~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~---------gIp~~~~~~~~~~~-- 70 (209)
T 4ds3_A 5 MKRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAA---------GIATQVFKRKDFAS-- 70 (209)
T ss_dssp -CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHT---------TCCEEECCGGGSSS--
T ss_pred CCCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHc---------CCCEEEeCccccCC--
Confidence 7888999888776543 556666775543 6888776532 2 2233444 7777665421 100
Q ss_pred CcchHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc-hHHHHHHHcCCceEEEechh
Q 012744 74 DRSDMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG-WAIEVAEKMKLRRAVVVITS 138 (457)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 138 (457)
.....+.+.+.++. .+||+||.=.+.. ....+-+...-.++.++++.
T Consensus 71 ------------r~~~d~~~~~~l~~------~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSL 118 (209)
T 4ds3_A 71 ------------KEAHEDAILAALDV------LKPDIICLAGYMRLLSGRFIAPYEGRILNIHPSL 118 (209)
T ss_dssp ------------HHHHHHHHHHHHHH------HCCSEEEESSCCSCCCHHHHGGGTTCEEEEESSC
T ss_pred ------------HHHHHHHHHHHHHh------cCCCEEEEeccccCcCHHHHhhccCCeEEECCcc
Confidence 01111233344444 7899999887644 55666677777788887764
No 71
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=86.03 E-value=9 Score=32.64 Aligned_cols=104 Identities=10% Similarity=0.035 Sum_probs=62.8
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhC--CCeEEEEeCCc-ch---hHHHhhhcCCCCCCCCeEEEecCCC-CCCCCCc
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKH--GLRITFVNSEY-NH---KRVLESLEGKNYIGEQIHLVSIPDG-MEPWDDR 75 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~--Gh~Vt~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 75 (457)
.+||+|+..|+.. -+.++.++|.+. +++|..+.+.. .. +...+. |+.+..++.. +..
T Consensus 22 ~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~---------gIp~~~~~~~~~~~---- 85 (229)
T 3auf_A 22 MIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRA---------GVDALHMDPAAYPS---- 85 (229)
T ss_dssp CEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHT---------TCEEEECCGGGSSS----
T ss_pred CcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHc---------CCCEEEECcccccc----
Confidence 3589998777743 367788888776 68887665442 21 233333 7887765421 100
Q ss_pred chHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc-hHHHHHHHcCCceEEEechh
Q 012744 76 SDMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG-WAIEVAEKMKLRRAVVVITS 138 (457)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 138 (457)
...+.+ ++++.+++ .+||+||+=.+.. ....+-+.+...++.++++.
T Consensus 86 ----------r~~~~~---~~~~~l~~---~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpSL 133 (229)
T 3auf_A 86 ----------RTAFDA---ALAERLQA---YGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPSL 133 (229)
T ss_dssp ----------HHHHHH---HHHHHHHH---TTCSEEEESSCCSCCCHHHHHHSTTCEEEEESSC
T ss_pred ----------hhhccH---HHHHHHHh---cCCCEEEEcChhHhCCHHHHhhccCCEEEEccCc
Confidence 011112 23334443 8999999876644 55666677777889887764
No 72
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=84.48 E-value=9.6 Score=32.01 Aligned_cols=103 Identities=6% Similarity=0.092 Sum_probs=60.8
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhC--CCeEEEEeCCc-c---hhHHHhhhcCCCCCCCCeEEEecCCC-CCCCCCcc
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKH--GLRITFVNSEY-N---HKRVLESLEGKNYIGEQIHLVSIPDG-MEPWDDRS 76 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~--Gh~Vt~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 76 (457)
+|+.++-.|+.+ -+.++.++|.+. +|+|..+.+.. . .+...+. |+.+..++.. +..
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~---------gIp~~~~~~~~~~~----- 66 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARE---------NVPAFVFSPKDYPS----- 66 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHT---------TCCEEECCGGGSSS-----
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHc---------CCCEEEeCcccccc-----
Confidence 467777666643 366777888877 68998776543 2 2233333 6776655321 100
Q ss_pred hHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc-hHHHHHHHcCCceEEEechh
Q 012744 77 DMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG-WAIEVAEKMKLRRAVVVITS 138 (457)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 138 (457)
.....+ ++++.+++ .+||+||.=.+.. ....+-+...-.++.++++.
T Consensus 67 ---------~~~~~~---~~~~~l~~---~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSL 114 (212)
T 3av3_A 67 ---------KAAFES---EILRELKG---RQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPSL 114 (212)
T ss_dssp ---------HHHHHH---HHHHHHHH---TTCCEEEESSCCSCCCHHHHHHTTTCEEEEESSC
T ss_pred ---------hhhhHH---HHHHHHHh---cCCCEEEEchhhhhCCHHHHhhhcCCEEEEecCc
Confidence 011112 33334443 8999999876544 56666677777889887764
No 73
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=84.26 E-value=7.6 Score=30.97 Aligned_cols=145 Identities=13% Similarity=0.109 Sum_probs=83.3
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccc
Q 012744 269 NSVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISC 348 (457)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~ 348 (457)
+|.|-|-+||.+ +.+..++..+.++..+..+-+-+.+. ...|+.+.+ |+.+.+ -..+++
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~~----------~~~~a~-~~g~~V-- 69 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA------HRTPDYMFE----------YAETAR-ERGLKV-- 69 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHH----------HHHHTT-TTTCCE--
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEec------cCCHHHHHH----------HHHHHH-hCCCcE--
Confidence 456788888755 55677788888888888865555433 345554321 111100 012344
Q ss_pred eeeccCcc----hhhhhhhcCCceeccccccc---hhhhHHhhhh--hhceeE-EeeccCCCccCHHHHHHHHHHHhCCH
Q 012744 349 FMSHCGWN----STTEGVSNGVPFLCWPFFAD---QFMNTTYICD--VWKVGL-RLERNQSGIIGREEIKNKVDQVLGDQ 418 (457)
Q Consensus 349 ~I~HgG~~----s~~eal~~GvP~l~~P~~~D---Q~~na~~v~~--~lG~g~-~l~~~~~~~~~~~~l~~~i~~~l~~~ 418 (457)
+|.=+|.. ++..++ .-+|+|.+|.... -.+--.-+.+ . |+.+ .+..++.+..++.-++..|. -+.|+
T Consensus 70 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d~ 146 (170)
T 1xmp_A 70 IIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQIL-GSFHD 146 (170)
T ss_dssp EEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHHHH-HTTCH
T ss_pred EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHHHH-ccCCH
Confidence 77776653 444444 3689999997542 1111122222 2 5542 22221013356677777775 45689
Q ss_pred HHHHHHHHHHHHHHhhhhc
Q 012744 419 NFKARALKLKEKALSSVRE 437 (457)
Q Consensus 419 ~~~~~a~~l~~~~~~~~~~ 437 (457)
+++++.+..+++.++.+.+
T Consensus 147 ~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 147 DIHDALELRREAIEKDVRE 165 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999998876543
No 74
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=83.72 E-value=5.8 Score=34.19 Aligned_cols=113 Identities=7% Similarity=0.079 Sum_probs=59.1
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCC--CCCCCCcchHHHH
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDG--MEPWDDRSDMRKL 81 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 81 (457)
||||+..=-+. |.--+..|+++|.+.| +|+++.+...+....... .....+++..++.+ .....-...+...
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si----Tl~~pl~~~~~~~~~~~~~~~v~GTPaDC 74 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSI----TIHVPLWMKKVFISERVVAYSTTGTPADC 74 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCC----CCSSCCCEEECCCSSSEEEEEESSCHHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc----cCCCCeEEEEeccCCCCceEEECCcHHHH
Confidence 35555443232 3334889999998888 899999877654332211 11123455554322 0000011122222
Q ss_pred HHHHHHhcchHHHHHHHHHhcCCCCCeeEEEe----------cCCcc---hHHHHHHHcCCceEEEec
Q 012744 82 LEKRLQVMPGKLEGLIEEIHGREGEKTACLIA----------DGAAG---WAIEVAEKMKLRRAVVVI 136 (457)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~----------D~~~~---~~~~~A~~lgiP~v~~~~ 136 (457)
....+ ..+.. .+||+||+ |.+++ .|+.=|..+|||.|.++.
T Consensus 75 V~lal-----------~~l~~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 75 VKLAY-----------NVVMD---KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp HHHHH-----------HTTST---TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHH-----------Hhhcc---CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 22211 11112 58999997 33333 445556778999999875
No 75
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=83.40 E-value=1.7 Score=36.46 Aligned_cols=48 Identities=17% Similarity=0.162 Sum_probs=40.3
Q ss_pred CC-CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhh
Q 012744 1 MS-SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLES 49 (457)
Q Consensus 1 m~-~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~ 49 (457)
|. ++||++-..|+.|-+. ...|.+.|.++|++|.++.++.....+...
T Consensus 1 m~~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~~e 49 (209)
T 3zqu_A 1 MSGPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMATE 49 (209)
T ss_dssp CCSCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred CCCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHHHH
Confidence 55 4688888888887777 889999999999999999998887777654
No 76
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=83.39 E-value=1 Score=44.23 Aligned_cols=39 Identities=23% Similarity=0.294 Sum_probs=29.6
Q ss_pred CCEEEEEcCC------CCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 3 SPHVVVIPNP------EQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 3 ~~~vl~~~~~------~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
+|||+|++.- +.|=-.-+-+|.++|+++||+|+++++.+
T Consensus 9 ~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y 53 (536)
T 3vue_A 9 HMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRY 53 (536)
T ss_dssp CCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred CcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCc
Confidence 7999999743 22322346789999999999999999643
No 77
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=82.98 E-value=5 Score=34.24 Aligned_cols=37 Identities=11% Similarity=0.101 Sum_probs=29.8
Q ss_pred CCCEEEEEcCC--CCcChHHHHHHHHHHHhCCCeEEEEe
Q 012744 2 SSPHVVVIPNP--EQGHVIPLLELSQNLAKHGLRITFVN 38 (457)
Q Consensus 2 ~~~~vl~~~~~--~~GH~~p~~~la~~L~~~Gh~Vt~~~ 38 (457)
+||+.+|++.. ..|=-.-...|++.|+++|++|.++=
T Consensus 2 ~~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 2 NAMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TTCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 56776666644 33888889999999999999999974
No 78
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=82.70 E-value=9.6 Score=31.55 Aligned_cols=43 Identities=14% Similarity=0.151 Sum_probs=36.1
Q ss_pred hHHHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHcCCceEEEechhh
Q 012744 91 GKLEGLIEEIHGREGEKTACLIADGAAGWAIEVAEKMKLRRAVVVITSA 139 (457)
Q Consensus 91 ~~~~~~~~~l~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~~~ 139 (457)
..++..++.+++ .++|+||.| ..+..+|+++|+|.+.+.++..
T Consensus 129 ~e~~~~i~~l~~---~G~~vvVG~---~~~~~~A~~~Gl~~vli~sg~e 171 (196)
T 2q5c_A 129 DEITTLISKVKT---ENIKIVVSG---KTVTDEAIKQGLYGETINSGEE 171 (196)
T ss_dssp GGHHHHHHHHHH---TTCCEEEEC---HHHHHHHHHTTCEEEECCCCHH
T ss_pred HHHHHHHHHHHH---CCCeEEECC---HHHHHHHHHcCCcEEEEecCHH
Confidence 467888888888 889999999 4568899999999999877544
No 79
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=82.67 E-value=3.5 Score=35.76 Aligned_cols=100 Identities=12% Similarity=0.068 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcchHHHHHHHHHHhcchHHHHHH
Q 012744 18 IPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSDMRKLLEKRLQVMPGKLEGLI 97 (457)
Q Consensus 18 ~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (457)
--+..|+++|.+.| +|+++.+...+...... -+....+++..+...... .....+....... +..++
T Consensus 15 pGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~s----iT~~~pl~~~~~~~~~~~-~v~GTPaDCV~la-------l~~~l 81 (251)
T 2wqk_A 15 PGINALREALKSLG-RVVVVAPDRNLSGVGHS----LTFTEPLKMRKIDTDFYT-VIDGTPADCVHLG-------YRVIL 81 (251)
T ss_dssp HHHHHHHHHHTTTS-EEEEEEESSCCTTSCCS----CCCSSCEEEEEEETTEEE-ETTCCHHHHHHHH-------HHTTT
T ss_pred HHHHHHHHHHHhCC-CEEEEeeCCCCcccccC----cCCCCCceeEEeecccee-ecCCChHHHHhhh-------hhhhc
Confidence 34788999999998 58888876654332211 122223554443221000 0011122221111 11112
Q ss_pred HHHhcCCCCCeeEEEe----------cCCcc---hHHHHHHHcCCceEEEec
Q 012744 98 EEIHGREGEKTACLIA----------DGAAG---WAIEVAEKMKLRRAVVVI 136 (457)
Q Consensus 98 ~~l~~~~~~~~D~vv~----------D~~~~---~~~~~A~~lgiP~v~~~~ 136 (457)
.+ .+||+||+ |.+++ .|+.=|..+|||.|.++-
T Consensus 82 ---~~---~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 82 ---EE---KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp ---TT---CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ---CC---CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 22 68999998 44444 445556788999999874
No 80
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=82.60 E-value=0.81 Score=43.31 Aligned_cols=39 Identities=8% Similarity=0.190 Sum_probs=30.2
Q ss_pred CCEEEEEcCCCC-----cChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 3 SPHVVVIPNPEQ-----GHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 3 ~~~vl~~~~~~~-----GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
+|||++++.... |=......+|++|+++||+|++++...
T Consensus 46 ~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 46 GKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp SCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 689988874421 323468899999999999999999754
No 81
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=82.01 E-value=5.6 Score=37.87 Aligned_cols=104 Identities=13% Similarity=0.145 Sum_probs=62.8
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecC--CCCCCC----CCcc
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIP--DGMEPW----DDRS 76 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~ 76 (457)
++|-+|++. ++=.-++.+|+.|.+.|.++. ++......+++. |+....+. .++|+. -++-
T Consensus 9 ~i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~---------GI~v~~V~~vTgfPEil~GRVKTL 74 (523)
T 3zzm_A 9 PIRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADT---------GIPVTPVEQLTGFPEVLDGRVKTL 74 (523)
T ss_dssp CCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTT---------TCCCEEHHHHHSCCCCTTTTSSSC
T ss_pred cccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHc---------CCceeeccccCCCchhhCCccccC
Confidence 445566665 455568899999999998875 676777888877 67666653 233332 3566
Q ss_pred hHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcchHHHHH
Q 012744 77 DMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAGWAIEVA 124 (457)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~~~~~~A 124 (457)
++.-+--.+...-.+.-.+-+++..- ...|+||++ ++++...++
T Consensus 75 HP~ihgGiLa~r~~~~h~~~l~~~~i---~~iDlVvvN-LYPF~~tv~ 118 (523)
T 3zzm_A 75 HPRVHAGLLADLRKSEHAAALEQLGI---EAFELVVVN-LYPFSQTVE 118 (523)
T ss_dssp SHHHHHHHHCCTTSHHHHHHHHHHTC---CCCSEEEEE-CCCHHHHHH
T ss_pred CchhhhhhccCCCCHHHHHHHHHCCC---CceeEEEEe-CCChHHHHh
Confidence 66655555433323322222333222 678999999 555555544
No 82
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=81.97 E-value=4.4 Score=35.19 Aligned_cols=122 Identities=13% Similarity=0.099 Sum_probs=64.6
Q ss_pred CCEEEEEcCC--CCcChHHHHHHHHHHHhCCCeEEEEeC---C---c--chhHHHhhhcCCCCCCCCeEEEecCCCCCCC
Q 012744 3 SPHVVVIPNP--EQGHVIPLLELSQNLAKHGLRITFVNS---E---Y--NHKRVLESLEGKNYIGEQIHLVSIPDGMEPW 72 (457)
Q Consensus 3 ~~~vl~~~~~--~~GH~~p~~~la~~L~~~Gh~Vt~~~~---~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (457)
+++.+|++.. ..|=-.-...|++.|+++|++|.++=+ . . ....+.+... . ....+.+.+...
T Consensus 25 ~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~~~~~~~g-~---~~~~~~~~~~~p---- 96 (251)
T 3fgn_A 25 HMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRLAG-V---TQLAGLARYPQP---- 96 (251)
T ss_dssp SCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHHHHHHHHC-C---CEEEEEEECSSS----
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHHHHHHHcC-C---CCCCCCeeECCC----
Confidence 4566665544 337788899999999999999999852 1 1 1112222210 0 000111111111
Q ss_pred CCcchHHHHHHHHHHhc-chHHHHHHHHHhcCCCCCeeEEEecCCc----------chHHHHHHHcCCceEEEechh
Q 012744 73 DDRSDMRKLLEKRLQVM-PGKLEGLIEEIHGREGEKTACLIADGAA----------GWAIEVAEKMKLRRAVVVITS 138 (457)
Q Consensus 73 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~D~vv~D~~~----------~~~~~~A~~lgiP~v~~~~~~ 138 (457)
........ .... ....+.+.+.+.+.. .++|++|+|... .....+|+.++.|++.+....
T Consensus 97 -~sP~~aa~----~~~~~~~~~~~i~~~~~~l~-~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~~ 167 (251)
T 3fgn_A 97 -MAPAAAAE----HAGMALPARDQIVRLIADLD-RPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTAD 167 (251)
T ss_dssp -SCHHHHHH----HTTCCCCCHHHHHHHHHTTC-CTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECSS
T ss_pred -CChHHHHH----HcCCCCCCHHHHHHHHHHHH-hcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcCC
Confidence 11111111 1111 112233333333222 678999999731 345789999999999987664
No 83
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=81.25 E-value=1.9 Score=35.09 Aligned_cols=45 Identities=9% Similarity=0.025 Sum_probs=36.6
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHh
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLE 48 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~ 48 (457)
++||++...|+.|=+. ...+.+.|.++|++|.++.++....++..
T Consensus 5 ~k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi~~ 49 (175)
T 3qjg_A 5 GENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFING 49 (175)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGSCH
T ss_pred CCEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHhhH
Confidence 4688888888776665 88999999999999999999887666543
No 84
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=80.96 E-value=6.4 Score=36.79 Aligned_cols=36 Identities=8% Similarity=0.091 Sum_probs=27.9
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
|+.+||+++..+.. .+.+++++++.|++|+++..+.
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~~ 40 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMPN 40 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECSS
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCCC
Confidence 45678988877754 3669999999999999997643
No 85
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=80.31 E-value=15 Score=30.74 Aligned_cols=103 Identities=13% Similarity=0.062 Sum_probs=62.7
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhC--CCeEEEEeCCcc----hhHHHhhhcCCCCCCCCeEEEecCC-CCCCCCCcc
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKH--GLRITFVNSEYN----HKRVLESLEGKNYIGEQIHLVSIPD-GMEPWDDRS 76 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~--Gh~Vt~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 76 (457)
+||+++..|..+ -+.+|.+++.+. +|+|..+.+... .+...+. |+.+..++. .+..
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~---------gIp~~~~~~~~~~~----- 63 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQA---------GIATHTLIASAFDS----- 63 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHT---------TCEEEECCGGGCSS-----
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHc---------CCcEEEeCcccccc-----
Confidence 477777776664 467778887765 588877665432 2233333 788776542 1110
Q ss_pred hHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc-hHHHHHHHcCCceEEEechh
Q 012744 77 DMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG-WAIEVAEKMKLRRAVVVITS 138 (457)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 138 (457)
...+ -.++++.+++ .+||+||+=.+.. ....+-+.....++.++++.
T Consensus 64 ---------r~~~---~~~~~~~l~~---~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSl 111 (212)
T 1jkx_A 64 ---------REAY---DRELIHEIDM---YAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSL 111 (212)
T ss_dssp ---------HHHH---HHHHHHHHGG---GCCSEEEESSCCSCCCHHHHHHTTTSEEEEESSC
T ss_pred ---------hhhc---cHHHHHHHHh---cCCCEEEEeChhhhCCHHHHhhccCCEEEEccCc
Confidence 0111 1234455555 8999999887643 55666677777889987765
No 86
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=79.99 E-value=8.6 Score=32.36 Aligned_cols=104 Identities=14% Similarity=0.098 Sum_probs=61.5
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHh-CCCeEEEEeCCcc----hhHHHhhhcCCCCCCCCeEEEecCCC-CCCCCCcc
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAK-HGLRITFVNSEYN----HKRVLESLEGKNYIGEQIHLVSIPDG-MEPWDDRS 76 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~-~Gh~Vt~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 76 (457)
++||+++..|..+-+ .+|.++..+ .+++|..+.+... .+...+. |+.+..++.. ++.
T Consensus 5 ~~riavl~SG~Gsnl---~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~---------gIp~~~~~~~~~~~----- 67 (215)
T 3tqr_A 5 PLPIVVLISGNGTNL---QAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQA---------DIPTHIIPHEEFPS----- 67 (215)
T ss_dssp CEEEEEEESSCCHHH---HHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHT---------TCCEEECCGGGSSS-----
T ss_pred CcEEEEEEeCCcHHH---HHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHc---------CCCEEEeCccccCc-----
Confidence 678988887765444 444555543 3688887765332 2233443 7777766421 110
Q ss_pred hHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc-hHHHHHHHcCCceEEEechh
Q 012744 77 DMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG-WAIEVAEKMKLRRAVVVITS 138 (457)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 138 (457)
.... -+++++.+++ .++|+||.=.+.. ....+-+...-.++.++++.
T Consensus 68 ---------r~~~---d~~~~~~l~~---~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSL 115 (215)
T 3tqr_A 68 ---------RTDF---ESTLQKTIDH---YDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPSL 115 (215)
T ss_dssp ---------HHHH---HHHHHHHHHT---TCCSEEEESSCCSCCCHHHHHHTTTSEEEEESSS
T ss_pred ---------hhHh---HHHHHHHHHh---cCCCEEEEccchhhCCHHHHhhccCCeEEeCccc
Confidence 0001 1234445554 8999999876644 55666677777889887764
No 87
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=79.70 E-value=10 Score=32.53 Aligned_cols=111 Identities=10% Similarity=0.048 Sum_probs=60.8
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCC--C--CC-CcchH
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGME--P--WD-DRSDM 78 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~-~~~~~ 78 (457)
||||+..=-+. |.--+..|+++|.+.| +|+++.+...+...... ......+++..++.+.+ . .. -...+
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~s----iTl~~pl~~~~~~~~~~~~~~~~~~v~GTP 74 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHA----ITIAHPVRAYPHPSPLHAPHFPAYRVRGTP 74 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSS----CCCSSCBEEEECCCCTTSCCCCEEEEESCH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCccc----ccCCCCeEEEEeccCcCCCCCceEEEcCcH
Confidence 35555443232 3334889999999888 89999987764332211 12223566666643210 0 01 11222
Q ss_pred HHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEe----------cCCcc---hHHHHHHHcCCceEEEec
Q 012744 79 RKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIA----------DGAAG---WAIEVAEKMKLRRAVVVI 136 (457)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~----------D~~~~---~~~~~A~~lgiP~v~~~~ 136 (457)
.......+. + . .+||+||+ |.+++ .|+.=|..+|||.|.++.
T Consensus 75 aDCV~lal~------------l-~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 75 ADCVALGLH------------L-F---GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp HHHHHHHHH------------H-S---CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHc------------C-C---CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 222222221 2 2 68999997 33333 445556778999999864
No 88
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=79.67 E-value=12 Score=33.68 Aligned_cols=97 Identities=14% Similarity=0.115 Sum_probs=58.1
Q ss_pred CCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcch--------------hHHHhhhcCCCCCCCCeEEEecCC
Q 012744 2 SSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNH--------------KRVLESLEGKNYIGEQIHLVSIPD 67 (457)
Q Consensus 2 ~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~ 67 (457)
+++||+|+..+.. .....++|.++||+|..+.+.... ....+. |+.+.. |+
T Consensus 2 ~~mrIvf~Gt~~f-----a~~~L~~L~~~~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~---------gIpv~~-~~ 66 (314)
T 1fmt_A 2 ESLRIIFAGTPDF-----AARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEK---------GLPVFQ-PV 66 (314)
T ss_dssp CCCEEEEEECSHH-----HHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHT---------TCCEEC-CS
T ss_pred CCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEeCCCCccccccccCcCHHHHHHHHc---------CCcEEe-cC
Confidence 5789999877543 245557777789999877664321 122222 454432 11
Q ss_pred CCCCCCCcchHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc-hHHHHHHHcCCceEEEechh
Q 012744 68 GMEPWDDRSDMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG-WAIEVAEKMKLRRAVVVITS 138 (457)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 138 (457)
.+ . .+.+.+.++. .+||++|+=.+.. ....+-+.....++.++++.
T Consensus 67 ~~----~---------------~~~~~~~l~~------~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSL 113 (314)
T 1fmt_A 67 SL----R---------------PQENQQLVAE------LQADVMVVVAYGLILPKAVLEMPRLGCINVHGSL 113 (314)
T ss_dssp CS----C---------------SHHHHHHHHH------TTCSEEEEESCCSCCCHHHHHSSTTCEEEEESSS
T ss_pred CC----C---------------CHHHHHHHHh------cCCCEEEEeeccccCCHHHHhhccCCEEEEcCCc
Confidence 11 0 1223333444 8999988876643 55566677777899998876
No 89
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=79.22 E-value=14 Score=30.37 Aligned_cols=81 Identities=16% Similarity=0.143 Sum_probs=50.0
Q ss_pred EEEEEc--CCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcchHHHHH
Q 012744 5 HVVVIP--NPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSDMRKLL 82 (457)
Q Consensus 5 ~vl~~~--~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (457)
|++.+. -|+.|=-.-...||..|+++|++|.++-.........-.. ....++.+...+.
T Consensus 2 ~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~~~~~~~~----~~~~~~~~~~~~~--------------- 62 (206)
T 4dzz_A 2 KVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLTNWSK----AGKAAFDVFTAAS--------------- 62 (206)
T ss_dssp EEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHT----TSCCSSEEEECCS---------------
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCCCHHHHHh----cCCCCCcEEecCc---------------
Confidence 444443 3456888889999999999999999998654332222111 1112344443321
Q ss_pred HHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCC
Q 012744 83 EKRLQVMPGKLEGLIEEIHGREGEKTACLIADGA 116 (457)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~ 116 (457)
..+.++++.+. .++|+||.|.-
T Consensus 63 --------~~l~~~l~~l~----~~yD~viiD~~ 84 (206)
T 4dzz_A 63 --------EKDVYGIRKDL----ADYDFAIVDGA 84 (206)
T ss_dssp --------HHHHHTHHHHT----TTSSEEEEECC
T ss_pred --------HHHHHHHHHhc----CCCCEEEEECC
Confidence 34555566654 46999999964
No 90
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=79.22 E-value=13 Score=29.36 Aligned_cols=138 Identities=10% Similarity=0.102 Sum_probs=79.1
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccce
Q 012744 270 SVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCF 349 (457)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ 349 (457)
|.|-|-.||.+ +.+..++..+.++..+..+-+-+.+. ...|+.+. .|+...+--..+++ +
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~sa------HR~p~~~~----------~~~~~a~~~~~~~V--i 62 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSA------HKTAEHVV----------SMLKEYEALDRPKL--Y 62 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHH----------HHHHHHHTSCSCEE--E
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc------cCCHHHHH----------HHHHHhhhcCCCcE--E
Confidence 35667777654 55667778888888888766555543 44555532 12111110001344 8
Q ss_pred eeccCcc----hhhhhhhcCCceecccccc---chhhhHHhhhhhh--ceeEEeeccCCCccCHHHHHHHHHHHhCCHHH
Q 012744 350 MSHCGWN----STTEGVSNGVPFLCWPFFA---DQFMNTTYICDVW--KVGLRLERNQSGIIGREEIKNKVDQVLGDQNF 420 (457)
Q Consensus 350 I~HgG~~----s~~eal~~GvP~l~~P~~~---DQ~~na~~v~~~l--G~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~ 420 (457)
|.=+|.. ++..++ .-+|+|.+|... +..+ -.-+.+ + |+.+.-- ++..++.-++..|-.+ .|+.+
T Consensus 63 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~d-LlS~vq-mp~GvpVatv---~~~~nAa~lA~~Il~~-~d~~l 135 (159)
T 3rg8_A 63 ITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGAD-IYSSLR-MPSGISPALV---LEPKNAALLAARIFSL-YDKEI 135 (159)
T ss_dssp EEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTH-HHHHHC-CCTTCCCEEC---CSHHHHHHHHHHHHTT-TCHHH
T ss_pred EEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCcc-HHHHHh-CCCCCceEEe---cCchHHHHHHHHHHhC-CCHHH
Confidence 8777754 444443 558999999642 2222 222222 2 4443221 2556777777666544 58899
Q ss_pred HHHHHHHHHHHHhh
Q 012744 421 KARALKLKEKALSS 434 (457)
Q Consensus 421 ~~~a~~l~~~~~~~ 434 (457)
+++.+..+++..+.
T Consensus 136 ~~kl~~~r~~~~~~ 149 (159)
T 3rg8_A 136 ADSVKSYMESNAQK 149 (159)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999988887764
No 91
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=78.55 E-value=17 Score=29.41 Aligned_cols=142 Identities=11% Similarity=0.120 Sum_probs=84.1
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccc
Q 012744 269 NSVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISC 348 (457)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~ 348 (457)
-|.|-|-.||.+ +.+..++....++..+..+-+-+.+. ...|+.+.+ |+.+.+ =..+++
T Consensus 13 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~~----------~~~~a~-~~g~~V-- 71 (183)
T 1o4v_A 13 VPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSA------HRTPDRMFE----------YAKNAE-ERGIEV-- 71 (183)
T ss_dssp -CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHHH----------HHHHTT-TTTCCE--
T ss_pred CCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc------cCCHHHHHH----------HHHHHH-hCCCcE--
Confidence 467888888755 55677788888888888876555533 445555331 111100 012344
Q ss_pred eeeccCcc----hhhhhhhcCCceeccccccc--hhhhH-Hhhhhhh--ceeEE-eeccCCCccCHHHHHHHHHHHhCCH
Q 012744 349 FMSHCGWN----STTEGVSNGVPFLCWPFFAD--QFMNT-TYICDVW--KVGLR-LERNQSGIIGREEIKNKVDQVLGDQ 418 (457)
Q Consensus 349 ~I~HgG~~----s~~eal~~GvP~l~~P~~~D--Q~~na-~~v~~~l--G~g~~-l~~~~~~~~~~~~l~~~i~~~l~~~ 418 (457)
+|.=+|.. ++..++ .-+|+|.+|.... .-..+ .-+.+ + |+.+. +.. ++..++.-++..|. -+.|+
T Consensus 72 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivq-mP~GvpVatV~I--d~~~nAa~lAaqIl-a~~d~ 146 (183)
T 1o4v_A 72 IIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQ-MPGGVPVATVAI--NNAKNAGILAASIL-GIKYP 146 (183)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTCCCEECCT--TCHHHHHHHHHHHH-HTTCH
T ss_pred EEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCeeEEEec--CCchHHHHHHHHHH-hcCCH
Confidence 77766643 444444 5689999997542 11122 22333 4 54322 222 35567777777776 45688
Q ss_pred HHHHHHHHHHHHHHhhhh
Q 012744 419 NFKARALKLKEKALSSVR 436 (457)
Q Consensus 419 ~~~~~a~~l~~~~~~~~~ 436 (457)
+++++.+..+++..+.+.
T Consensus 147 ~l~~kL~~~r~~~~~~v~ 164 (183)
T 1o4v_A 147 EIARKVKEYKERMKREVL 164 (183)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999888887543
No 92
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=78.44 E-value=6.7 Score=34.51 Aligned_cols=113 Identities=11% Similarity=-0.006 Sum_probs=59.3
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCC-CCCCCCcchHHHHH
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDG-MEPWDDRSDMRKLL 82 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 82 (457)
||||+..=-+. +.--+..|+++|.+.| +|+++.+...+...... ......+++..++.+ .....-...+....
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~s----iTl~~pl~~~~~~~~~~~~~~v~GTPaDCV 74 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLG----ITLHKPLRMYEVDLCGFRAIATSGTPSDTV 74 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSS----CCCSSCBCEEEEECSSSEEEEESSCHHHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCccc----ccCCCCeEEEEeccCCCceEEECCcHHHHH
Confidence 35555443232 3334889999999888 89999987765433221 111123444444321 00000111122221
Q ss_pred HHHHHhcchHHHHHHHHHhcCCCCCeeEEEe----------c-CCcc---hHHHHHHHcCCceEEEech
Q 012744 83 EKRLQVMPGKLEGLIEEIHGREGEKTACLIA----------D-GAAG---WAIEVAEKMKLRRAVVVIT 137 (457)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~----------D-~~~~---~~~~~A~~lgiP~v~~~~~ 137 (457)
.. -+..+ . .+||+||+ | .+++ .|+.=|..+|||.|.++..
T Consensus 75 ~l-----------al~~l-~---~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 75 YL-----------ATFGL-G---RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp HH-----------HHHHH-T---SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HH-----------HHhcC-C---CCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 11 12223 2 68999997 3 3333 4445567789999999763
No 93
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=78.32 E-value=11 Score=32.66 Aligned_cols=111 Identities=10% Similarity=0.133 Sum_probs=58.8
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCc-chHHHHH
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDR-SDMRKLL 82 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 82 (457)
||||+..=-+. |.--+..|+++|++.| +|+++.+...+....... .....++...+... ...-. ..+....
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~g~ai----Tl~~Pl~~~~~~~~--~~~v~~GTPaDCV 73 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGASNSL----TLESSLRTFTFDNG--DIAVQMGTPTDCV 73 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCC----CCSSCCEEEECTTS--CEEEETCCHHHHH
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCccCCc----CCCCCeEEEEeCCC--CeEECCCCHHHHH
Confidence 56666553333 4445889999998875 999999877654332211 11123555544211 00011 2222222
Q ss_pred HHHHHhcchHHHHHHHHHhcCCCCCeeEEEe----------cCCcch---HHHHHHHcCCceEEEec
Q 012744 83 EKRLQVMPGKLEGLIEEIHGREGEKTACLIA----------DGAAGW---AIEVAEKMKLRRAVVVI 136 (457)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~----------D~~~~~---~~~~A~~lgiP~v~~~~ 136 (457)
...+. .+-. .+||+||+ |.+++. |+.=|..+|||.|.++.
T Consensus 74 ~lal~-----------~ll~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 126 (254)
T 2v4n_A 74 YLGVN-----------ALMR---PRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSL 126 (254)
T ss_dssp HHHHH-----------TTSS---SCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEE
T ss_pred HHHHh-----------hccC---CCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 22221 1112 68999997 333332 33334567999999864
No 94
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=77.97 E-value=17 Score=32.91 Aligned_cols=41 Identities=15% Similarity=0.187 Sum_probs=33.0
Q ss_pred CEEEEEc-CCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 012744 4 PHVVVIP-NPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHK 44 (457)
Q Consensus 4 ~~vl~~~-~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~ 44 (457)
++++|++ -|+.|=-.-...+|..|+++|++|.++.......
T Consensus 16 ~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~~ 57 (334)
T 3iqw_A 16 LRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAHN 57 (334)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSCH
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCCC
Confidence 4566655 4566999999999999999999999999875443
No 95
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=76.84 E-value=1.9 Score=34.08 Aligned_cols=35 Identities=14% Similarity=0.257 Sum_probs=28.5
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|.+.|++++-. |++. ..+++.|.++||+|+++...
T Consensus 1 ~~~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 78889988843 5554 67899999999999999874
No 96
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=76.82 E-value=3 Score=35.00 Aligned_cols=46 Identities=9% Similarity=0.112 Sum_probs=38.2
Q ss_pred CCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhh
Q 012744 2 SSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLES 49 (457)
Q Consensus 2 ~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~ 49 (457)
+++||++...|+.+-+. ...|.+.|.++| +|.++.++....++...
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~~~ 63 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLDKL 63 (209)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCCGG
T ss_pred CCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcCHH
Confidence 36789998888888766 899999999999 99999998877666544
No 97
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=76.38 E-value=27 Score=29.11 Aligned_cols=103 Identities=13% Similarity=0.055 Sum_probs=58.5
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhC--CCeEEEEeCCcch----hHHHhhhcCCCCCCCCeEEEecCCC-CCCCCCcc
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKH--GLRITFVNSEYNH----KRVLESLEGKNYIGEQIHLVSIPDG-MEPWDDRS 76 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~--Gh~Vt~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 76 (457)
+||+++..|..+- +.+|.+++.+. +|+|..+.+.... +...+. |+.+..++.. +..
T Consensus 1 ~riaVl~SG~Gs~---L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~---------gIp~~~~~~~~~~~----- 63 (209)
T 1meo_A 1 ARVAVLISGTGSN---LQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERA---------GIPTRVINHKLYKN----- 63 (209)
T ss_dssp CEEEEEESSSCTT---HHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHT---------TCCEEECCGGGSSS-----
T ss_pred CeEEEEEECCchH---HHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHc---------CCCEEEECccccCc-----
Confidence 4677777776654 44455666554 6899877654432 223333 6776655321 100
Q ss_pred hHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc-hHHHHHHHcCCceEEEechh
Q 012744 77 DMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG-WAIEVAEKMKLRRAVVVITS 138 (457)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 138 (457)
...+...+.+.++. .+||+||+=.+.. ....+-+.....++.++++.
T Consensus 64 ---------r~~~~~~~~~~l~~------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSL 111 (209)
T 1meo_A 64 ---------RVEFDSAIDLVLEE------FSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSL 111 (209)
T ss_dssp ---------HHHHHHHHHHHHHH------TTCCEEEEESCCSCCCHHHHHHTTTSEEEEESSS
T ss_pred ---------hhhhhHHHHHHHHh------cCCCEEEEcchhhhCCHHHHhhhcCCEEEEccCc
Confidence 01111223334444 8999988876543 55556677777888887764
No 98
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=76.35 E-value=27 Score=27.73 Aligned_cols=144 Identities=13% Similarity=0.122 Sum_probs=82.3
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccce
Q 012744 270 SVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCF 349 (457)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ 349 (457)
|.|-|-.||.+ +.+..++..+.++..+..+-+-+.+. ...|+.+. +|+.... -..+++ +
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa------HRtp~~l~----------~~~~~~~-~~g~~V--i 64 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSA------HRTPDKMF----------DYAETAK-ERGLKV--I 64 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCT------TTCHHHHH----------HHHHHTT-TTTCCE--E
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcC------cCCHHHHH----------HHHHHHH-hCCCcE--E
Confidence 46777788754 55667788888888888765555433 34555533 2221110 012344 8
Q ss_pred eeccCcc----hhhhhhhcCCceeccccccc---h---hhhHHhhhhhhceeEEe-eccCCCccCHHHHHHHHHHHhCCH
Q 012744 350 MSHCGWN----STTEGVSNGVPFLCWPFFAD---Q---FMNTTYICDVWKVGLRL-ERNQSGIIGREEIKNKVDQVLGDQ 418 (457)
Q Consensus 350 I~HgG~~----s~~eal~~GvP~l~~P~~~D---Q---~~na~~v~~~lG~g~~l-~~~~~~~~~~~~l~~~i~~~l~~~ 418 (457)
|.=+|.. ++..++ --+|+|.+|...- - ..-.-.+.. |+++.. ..++.+..++.-++..|-.+ .|+
T Consensus 65 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~--gvpVatV~I~~ag~~nAa~lAa~Il~~-~d~ 140 (166)
T 3oow_A 65 IAGAGGAAHLPGMVAAK-TTLPVLGVPVKSSTLNGQDSLLSIVQMPA--GIPVATFAIGMAGAKNAALFAASILQH-TDI 140 (166)
T ss_dssp EEEECSSCCHHHHHHHT-CSSCEEEEECCCTTTTTHHHHHHHHTCCT--TSCCEECCSTHHHHHHHHHHHHHHHGG-GCH
T ss_pred EEECCcchhhHHHHHhc-cCCCEEEeecCcCCCCCHHHHHHHhcCCC--CCceEEEecCCccchHHHHHHHHHHcC-CCH
Confidence 8877754 444443 3589999997432 1 111222333 444332 22100234666666666544 589
Q ss_pred HHHHHHHHHHHHHHhhhhcC
Q 012744 419 NFKARALKLKEKALSSVREG 438 (457)
Q Consensus 419 ~~~~~a~~l~~~~~~~~~~~ 438 (457)
.++++.+..++++++.+.+.
T Consensus 141 ~l~~kl~~~r~~~~~~v~~~ 160 (166)
T 3oow_A 141 NIAKALAEFRAEQTRFVLEN 160 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99999999999988765443
No 99
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=76.30 E-value=13 Score=33.40 Aligned_cols=105 Identities=10% Similarity=0.040 Sum_probs=57.0
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCC-----CCCCCCeEEEecCCCCCCCCCcch
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGK-----NYIGEQIHLVSIPDGMEPWDDRSD 77 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 77 (457)
+|||+|+-.+..+ +...++|.++||+|..+.+...+..-+...... .....|+.+.. |..+ .
T Consensus 2 ~mrivf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~gIpv~~-~~~~----~--- 68 (314)
T 3tqq_A 2 SLKIVFAGTPQFA-----VPTLRALIDSSHRVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIPIIQ-PFSL----R--- 68 (314)
T ss_dssp CCEEEEEECSGGG-----HHHHHHHHHSSSEEEEEECCCC----------CCHHHHHHHHTTCCEEC-CSCS----S---
T ss_pred CcEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeCCCCccccCCccCCCHHHHHHHHcCCCEEC-cccC----C---
Confidence 5899999877554 345678888999998887754332211000000 00001343322 1111 0
Q ss_pred HHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc-hHHHHHHHcCCceEEEechh
Q 012744 78 MRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG-WAIEVAEKMKLRRAVVVITS 138 (457)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 138 (457)
.+ ++++.+++ .+||++|+=.+.. ....+-+.....++.++++.
T Consensus 69 ------------~~---~~~~~l~~---~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSl 112 (314)
T 3tqq_A 69 ------------DE---VEQEKLIA---MNADVMVVVAYGLILPKKALNAFRLGCVNVHASL 112 (314)
T ss_dssp ------------SH---HHHHHHHT---TCCSEEEEESCCSCCCHHHHTSSTTCEEEEESSC
T ss_pred ------------CH---HHHHHHHh---cCCCEEEEcCcccccCHHHHhhCcCCEEEecCcc
Confidence 01 33444444 8999998876543 55555666666689988876
No 100
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=76.03 E-value=2.7 Score=35.07 Aligned_cols=44 Identities=14% Similarity=0.055 Sum_probs=35.1
Q ss_pred CCCEEEEEcCCCCcChH-HHHHHHHHHHhCCCeEEEEeCCcchhHH
Q 012744 2 SSPHVVVIPNPEQGHVI-PLLELSQNLAKHGLRITFVNSEYNHKRV 46 (457)
Q Consensus 2 ~~~~vl~~~~~~~GH~~-p~~~la~~L~~~Gh~Vt~~~~~~~~~~~ 46 (457)
+++||++--.|+ +... -...+.+.|.++|++|.++.++.....+
T Consensus 6 ~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i 50 (201)
T 3lqk_A 6 AGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTTD 50 (201)
T ss_dssp TTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTT
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHH
Confidence 367888888887 4444 7899999999999999999987765443
No 101
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=75.89 E-value=29 Score=28.06 Aligned_cols=75 Identities=8% Similarity=0.023 Sum_probs=41.2
Q ss_pred eecCCCch-h-hccCCCccceeeccCcchhhhh---hhcCCceeccccccchhhhHHhhhhhhceeEEeeccCCCccCHH
Q 012744 331 MISWSPQQ-K-VLTHPSISCFMSHCGWNSTTEG---VSNGVPFLCWPFFADQFMNTTYICDVWKVGLRLERNQSGIIGRE 405 (457)
Q Consensus 331 ~~~~~pq~-~-ll~~~~~~~~I~HgG~~s~~ea---l~~GvP~l~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~~~~ 405 (457)
++++.+.. . +...++. .++--||.||..|+ +.+++|++++|.+. .....+.+...-.+.+. -+++
T Consensus 93 ~~~~~~~Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~~~~~i~~~------~~~~ 162 (176)
T 2iz6_A 93 VTGLGSARDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSLDAGLVHVA------ADVA 162 (176)
T ss_dssp ECCCCSSSCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHHCTTTEEEE------SSHH
T ss_pred EcCCHHHHHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChhhcCeEEEc------CCHH
Confidence 34555543 3 3334443 46667888876554 77999999999832 11112222101112221 2677
Q ss_pred HHHHHHHHHh
Q 012744 406 EIKNKVDQVL 415 (457)
Q Consensus 406 ~l~~~i~~~l 415 (457)
++.+.+.+.+
T Consensus 163 e~~~~l~~~~ 172 (176)
T 2iz6_A 163 GAIAAVKQLL 172 (176)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777777655
No 102
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=75.62 E-value=5 Score=33.07 Aligned_cols=44 Identities=16% Similarity=0.149 Sum_probs=37.6
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHh
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLE 48 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~ 48 (457)
+||++...|+.|-+ =...+.+.|.++|++|.++.++.....+..
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 47888888888855 578999999999999999999888777766
No 103
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=75.52 E-value=15 Score=29.58 Aligned_cols=146 Identities=13% Similarity=0.126 Sum_probs=83.7
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccc
Q 012744 269 NSVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISC 348 (457)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~ 348 (457)
.+.|-|-+||.+ +.+..++....++..+..+-+-+.+. ...|+.+.+ |+.+.+ -..+++
T Consensus 21 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~~----------~~~~a~-~~g~~V-- 79 (182)
T 1u11_A 21 APVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSA------HRTPDRLAD----------YARTAA-ERGLNV-- 79 (182)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHH----------HHHHTT-TTTCCE--
T ss_pred CCEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEcc------cCCHHHHHH----------HHHHHH-hCCCcE--
Confidence 345777778754 55667778888888888765555433 445555321 111100 012344
Q ss_pred eeeccCcc----hhhhhhhcCCceeccccccc---hhhhHHhhhh--hhceeEE-eeccCCCccCHHHHHHHHHHHhCCH
Q 012744 349 FMSHCGWN----STTEGVSNGVPFLCWPFFAD---QFMNTTYICD--VWKVGLR-LERNQSGIIGREEIKNKVDQVLGDQ 418 (457)
Q Consensus 349 ~I~HgG~~----s~~eal~~GvP~l~~P~~~D---Q~~na~~v~~--~lG~g~~-l~~~~~~~~~~~~l~~~i~~~l~~~ 418 (457)
+|.=.|.. ++..++ .-+|+|.+|.... -.+--.-+.+ . |+.+. +..++.+..++.-++..|. -+.|+
T Consensus 80 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d~ 156 (182)
T 1u11_A 80 IIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPG-GVPVGTLAIGASGAKNAALLAASIL-ALYNP 156 (182)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCT-TSCCEECCSSHHHHHHHHHHHHHHH-GGGCH
T ss_pred EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCceEEEecCCccchHHHHHHHHHH-ccCCH
Confidence 77776643 455554 4789999997542 1111122233 2 55532 2221013356677776665 45689
Q ss_pred HHHHHHHHHHHHHHhhhhcC
Q 012744 419 NFKARALKLKEKALSSVREG 438 (457)
Q Consensus 419 ~~~~~a~~l~~~~~~~~~~~ 438 (457)
.++++.+..+++..+.+.+.
T Consensus 157 ~l~~kL~~~r~~~~~~v~~~ 176 (182)
T 1u11_A 157 ALAARLETWRALQTASVPNS 176 (182)
T ss_dssp HHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999988765443
No 104
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=75.32 E-value=23 Score=30.94 Aligned_cols=39 Identities=21% Similarity=0.364 Sum_probs=30.5
Q ss_pred CCEEEEEcC--CCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 3 SPHVVVIPN--PEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 3 ~~~vl~~~~--~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
+++++.++. |+.|=-.-...||..|++.|.+|.++-...
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~ 121 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDM 121 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 445555543 566888889999999999999999997643
No 105
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=74.84 E-value=3.9 Score=33.92 Aligned_cols=45 Identities=16% Similarity=0.155 Sum_probs=37.7
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhC-CCeEEEEeCCcchhHHHhh
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKH-GLRITFVNSEYNHKRVLES 49 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~-Gh~Vt~~~~~~~~~~~~~~ 49 (457)
+||++-..|+.|-+. ...+.+.|.++ |++|.++.++.....+...
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~~~ 46 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIELE 46 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhHHH
Confidence 478888888877766 89999999999 9999999998877777644
No 106
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=73.63 E-value=14 Score=29.29 Aligned_cols=142 Identities=11% Similarity=0.137 Sum_probs=79.1
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccce
Q 012744 270 SVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCF 349 (457)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ 349 (457)
+.|-|-.||.+ +.+..++..+.++..+..+-+-+.+. ...|+.+.+ |+...+ -..+++ +
T Consensus 4 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa------HR~p~~~~~----------~~~~a~-~~g~~V--i 62 (163)
T 3ors_A 4 MKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSA------HRTPKMMVQ----------FASEAR-ERGINI--I 62 (163)
T ss_dssp CCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHH----------HHHHTT-TTTCCE--E
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECC------cCCHHHHHH----------HHHHHH-hCCCcE--E
Confidence 35667777644 55667788888888888765555433 445555321 111000 012344 7
Q ss_pred eeccCcc----hhhhhhhcCCceeccccccc---hhhhHHhhhhhh--ceeEE-eeccCCCccCHHHHHHHHHHHhCCHH
Q 012744 350 MSHCGWN----STTEGVSNGVPFLCWPFFAD---QFMNTTYICDVW--KVGLR-LERNQSGIIGREEIKNKVDQVLGDQN 419 (457)
Q Consensus 350 I~HgG~~----s~~eal~~GvP~l~~P~~~D---Q~~na~~v~~~l--G~g~~-l~~~~~~~~~~~~l~~~i~~~l~~~~ 419 (457)
|.=+|.. ++..++ --+|+|.+|.... -.+--.-+.+ + |+.+. +..++.+..++.-++..|-.+ .|+.
T Consensus 63 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vq-mp~GvPVatV~I~~a~~~nAa~lAa~Il~~-~d~~ 139 (163)
T 3ors_A 63 IAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQ-MPGGIPVATTAIGAAGAKNAGILAARMLSI-QNPS 139 (163)
T ss_dssp EEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTSCCEECCSTHHHHHHHHHHHHHHHHT-TCTH
T ss_pred EEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhh-CCCCCceEEEEcCCcccHHHHHHHHHHHhC-CCHH
Confidence 8777753 444443 5689999997532 1121112222 2 54222 222100345666666666554 5789
Q ss_pred HHHHHHHHHHHHHhhh
Q 012744 420 FKARALKLKEKALSSV 435 (457)
Q Consensus 420 ~~~~a~~l~~~~~~~~ 435 (457)
++++.+..++++++.+
T Consensus 140 l~~kl~~~r~~~~~~v 155 (163)
T 3ors_A 140 LVEKLNQYESSLIQKV 155 (163)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999998888643
No 107
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=73.20 E-value=3.9 Score=34.25 Aligned_cols=42 Identities=10% Similarity=-0.030 Sum_probs=31.6
Q ss_pred CCCEEEEEcCCCCcChHH-HHHHHHHHHhCCCeEEEEeCCcchh
Q 012744 2 SSPHVVVIPNPEQGHVIP-LLELSQNLAKHGLRITFVNSEYNHK 44 (457)
Q Consensus 2 ~~~~vl~~~~~~~GH~~p-~~~la~~L~~~Gh~Vt~~~~~~~~~ 44 (457)
+++||++-..|+ +..+- ...+.+.|.++|++|.++.++....
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~~ 46 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQS 46 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC----
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHHH
Confidence 467888877776 44554 8899999999999999999877653
No 108
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=73.06 E-value=1.9 Score=35.73 Aligned_cols=46 Identities=7% Similarity=-0.073 Sum_probs=37.3
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhh
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLES 49 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~ 49 (457)
++||++...|+.|=+. ...+.+.|.++|++|.++.++....++...
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~ 53 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLIPAH 53 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHSCHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHHHHH
Confidence 5688888888877665 789999999999999999998776665443
No 109
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=72.99 E-value=14 Score=33.79 Aligned_cols=40 Identities=10% Similarity=0.173 Sum_probs=32.7
Q ss_pred CEEEEEc-CCCCcChHHHHHHHHHHH--hCCCeEEEEeCCcch
Q 012744 4 PHVVVIP-NPEQGHVIPLLELSQNLA--KHGLRITFVNSEYNH 43 (457)
Q Consensus 4 ~~vl~~~-~~~~GH~~p~~~la~~L~--~~Gh~Vt~~~~~~~~ 43 (457)
++++|++ -|+.|=-.-...||..|+ ++|++|.++......
T Consensus 18 ~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~~ 60 (348)
T 3io3_A 18 LKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPAH 60 (348)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSSC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCCC
Confidence 4666665 456699999999999999 999999999987543
No 110
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=72.95 E-value=7.7 Score=31.02 Aligned_cols=144 Identities=10% Similarity=0.109 Sum_probs=80.1
Q ss_pred CCeEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCcc
Q 012744 268 ANSVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSIS 347 (457)
Q Consensus 268 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~ 347 (457)
+.|.|-|-+||.+ +....++..+.++..+..+-+-+.+. ...|+.+.+ |+-..+ -...++
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~sa------HR~p~~l~~----------~~~~a~-~~g~~V- 70 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSA------HRMPDEMFD----------YAEKAR-ERGLRA- 70 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHH----------HHHHHT-TTTCSE-
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcc------ccCHHHHHH----------HHHHHH-hcCCeE-
Confidence 3567888888755 55667778888888888776555543 445555332 111110 012333
Q ss_pred ceeeccCc----chhhhhhhcCCceeccccccc---hhhhHHhhhhhh--ceeEEee-ccCCCccCHHHHHHHHHHHhCC
Q 012744 348 CFMSHCGW----NSTTEGVSNGVPFLCWPFFAD---QFMNTTYICDVW--KVGLRLE-RNQSGIIGREEIKNKVDQVLGD 417 (457)
Q Consensus 348 ~~I~HgG~----~s~~eal~~GvP~l~~P~~~D---Q~~na~~v~~~l--G~g~~l~-~~~~~~~~~~~l~~~i~~~l~~ 417 (457)
+|.=.|. .++..+ .--+|+|.+|.... ..+--.-+.+ + |+.+-.- ..+++..++.-++..|- -+.|
T Consensus 71 -iIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivq-MP~Gvpvatv~i~~~~a~NAallA~~IL-a~~d 146 (173)
T 4grd_A 71 -IIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQ-MPKGVPVATFAIGEAGAANAALFAVSIL-SGNS 146 (173)
T ss_dssp -EEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHC-CCTTSCCEECCSSHHHHHHHHHHHHHHH-TTSC
T ss_pred -EEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHh-CCCCCCceEEecCCcchHHHHHHHHHHH-cCCC
Confidence 6665554 244444 44789999997432 2222222223 2 4433221 10012334555555553 3468
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 012744 418 QNFKARALKLKEKALSSV 435 (457)
Q Consensus 418 ~~~~~~a~~l~~~~~~~~ 435 (457)
++++++.++.+++.++.+
T Consensus 147 ~~l~~kl~~~r~~~~~~v 164 (173)
T 4grd_A 147 VDYANRLAAFRVRQNEAA 164 (173)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999998888754
No 111
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=72.58 E-value=3.1 Score=34.02 Aligned_cols=47 Identities=9% Similarity=0.086 Sum_probs=36.2
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhh
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLES 49 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~ 49 (457)
|.| ||++...|+.|=+ -...+.+.|.++|++|.++.++....++...
T Consensus 1 ~~k-~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~ 47 (181)
T 1g63_A 1 MYG-KLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFINTD 47 (181)
T ss_dssp CCC-CEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSCGG
T ss_pred CCC-EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHHHH
Confidence 444 5777666766555 5789999999999999999998877666544
No 112
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=71.99 E-value=7.3 Score=32.66 Aligned_cols=44 Identities=11% Similarity=0.048 Sum_probs=38.0
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHH
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRV 46 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~ 46 (457)
+.+|++.+.++..|-....-++..|..+|++|.++......+.+
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l 131 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKF 131 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHH
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 46899999999999999999999999999999999875544433
No 113
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=71.98 E-value=19 Score=31.76 Aligned_cols=83 Identities=10% Similarity=0.087 Sum_probs=55.0
Q ss_pred HHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcchHHHHHHHHHHhcchHHHHHHHHHhcCCCC
Q 012744 27 LAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSDMRKLLEKRLQVMPGKLEGLIEEIHGREGE 106 (457)
Q Consensus 27 L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 106 (457)
|.....+..+++++.+..+...+ |++...+.. .... .......+.++++.+++ .
T Consensus 174 l~~~~~~~~v~~H~af~Yf~~~y---------Gl~~~~~~~-~~~~-------------~eps~~~l~~l~~~ik~---~ 227 (286)
T 3gi1_A 174 FKKVRSKTFVTQHTAFSYLAKRF---------GLKQLGISG-ISPE-------------QEPSPRQLKEIQDFVKE---Y 227 (286)
T ss_dssp HTTCSCCEEEEEESCCHHHHHHT---------TCEEEEEEC-SCC----------------CCHHHHHHHHHHHHH---T
T ss_pred HhcCCCCEEEEECCchHHHHHHC---------CCeEeeccc-cCCC-------------CCCCHHHHHHHHHHHHH---c
Confidence 33334555667788888888888 777766432 1111 01222345566666666 8
Q ss_pred CeeEEEecCCcc--hHHHHHHHcCCceEEEe
Q 012744 107 KTACLIADGAAG--WAIEVAEKMKLRRAVVV 135 (457)
Q Consensus 107 ~~D~vv~D~~~~--~~~~~A~~lgiP~v~~~ 135 (457)
+..+|+++.... .+..+|+..|++.+.+.
T Consensus 228 ~v~~if~e~~~~~~~~~~la~~~g~~v~~l~ 258 (286)
T 3gi1_A 228 NVKTIFAEDNVNPKIAHAIAKSTGAKVKTLS 258 (286)
T ss_dssp TCCEEEECTTSCTHHHHHHHHTTTCEEEECC
T ss_pred CCCEEEEeCCCChHHHHHHHHHhCCeEEEec
Confidence 899999998766 66788999999998754
No 114
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=71.86 E-value=10 Score=31.87 Aligned_cols=106 Identities=8% Similarity=0.047 Sum_probs=58.8
Q ss_pred CCCEEEEEcCCCCcChHHHHHHHHHHHh-CCCeEEEEeCCcchh---HHHhhhcCCCCCCCCeEEEecCCCCCCCCCcch
Q 012744 2 SSPHVVVIPNPEQGHVIPLLELSQNLAK-HGLRITFVNSEYNHK---RVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSD 77 (457)
Q Consensus 2 ~~~~vl~~~~~~~GH~~p~~~la~~L~~-~Gh~Vt~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (457)
.++||+|+..|+.+-+ .+|.+++.+ .+++|..+.+..... ...+. |+.+..++..- . ..
T Consensus 11 ~~~ri~vl~SG~gsnl---~all~~~~~~~~~eI~~Vis~~~a~~~~~A~~~---------gIp~~~~~~~~--~-~~-- 73 (215)
T 3da8_A 11 APARLVVLASGTGSLL---RSLLDAAVGDYPARVVAVGVDRECRAAEIAAEA---------SVPVFTVRLAD--H-PS-- 73 (215)
T ss_dssp SSEEEEEEESSCCHHH---HHHHHHSSTTCSEEEEEEEESSCCHHHHHHHHT---------TCCEEECCGGG--S-SS--
T ss_pred CCcEEEEEEeCChHHH---HHHHHHHhccCCCeEEEEEeCCchHHHHHHHHc---------CCCEEEeCccc--c-cc--
Confidence 3568999888775433 444455433 346887776544322 33333 67766653110 0 00
Q ss_pred HHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc-hHHHHHHHcCCceEEEechh
Q 012744 78 MRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG-WAIEVAEKMKLRRAVVVITS 138 (457)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 138 (457)
..... +++++.+++ .++|+||.=.+.. ....+-+.+.-.++.++++.
T Consensus 74 --------r~~~d---~~~~~~l~~---~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpSL 121 (215)
T 3da8_A 74 --------RDAWD---VAITAATAA---HEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPAL 121 (215)
T ss_dssp --------HHHHH---HHHHHHHHT---TCCSEEEEEECCSCCCHHHHHHHTTTEEEEESSC
T ss_pred --------hhhhh---HHHHHHHHh---hCCCEEEEcCchhhCCHHHHhhccCCeEEeCccc
Confidence 01111 234444544 8999988876543 55556666677788887664
No 115
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=71.55 E-value=18 Score=32.32 Aligned_cols=95 Identities=11% Similarity=-0.030 Sum_probs=55.6
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcch-----------hHHHhhhcCCCCCCCCeEEEecCCCCCCC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNH-----------KRVLESLEGKNYIGEQIHLVSIPDGMEPW 72 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (457)
|||+|+..|. -.....++|.++||+|..+.+.... +...+. |+.+..... .
T Consensus 1 mrivf~gt~~-----fa~~~L~~L~~~~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~---------gIpv~~~~~-~--- 62 (305)
T 2bln_A 1 MKTVVFAYHD-----MGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAER---------GIPVYAPDN-V--- 62 (305)
T ss_dssp CEEEEEECHH-----HHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHH---------TCCEECCSC-C---
T ss_pred CEEEEEEcCH-----HHHHHHHHHHHCCCcEEEEEcCCCCCCCCcCccHHHHHHHHc---------CCCEECCCc-C---
Confidence 5788875432 1245567788889999887764432 222333 555443221 1
Q ss_pred CCcchHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc-hHHHHHHHcCCceEEEechh
Q 012744 73 DDRSDMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG-WAIEVAEKMKLRRAVVVITS 138 (457)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 138 (457)
. + + ++++.+++ .+||++|+=.+.. ....+-+.....++.++++.
T Consensus 63 -~--~-------------~---~~~~~l~~---~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSL 107 (305)
T 2bln_A 63 -N--H-------------P---LWVERIAQ---LSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSL 107 (305)
T ss_dssp -C--S-------------H---HHHHHHHH---TCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSC
T ss_pred -C--c-------------H---HHHHHHHh---cCCCEEEEeccccccCHHHHhcCcCCEEEecCCc
Confidence 0 0 1 23333443 8999998876543 55666666777899998884
No 116
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=71.38 E-value=3 Score=34.94 Aligned_cols=47 Identities=21% Similarity=0.163 Sum_probs=36.1
Q ss_pred CCCEEEEEcCCCCcChHHHHHHHHHHHh-CCCeEEEEeCCcchhHHHhh
Q 012744 2 SSPHVVVIPNPEQGHVIPLLELSQNLAK-HGLRITFVNSEYNHKRVLES 49 (457)
Q Consensus 2 ~~~~vl~~~~~~~GH~~p~~~la~~L~~-~Gh~Vt~~~~~~~~~~~~~~ 49 (457)
+++||++...|+.+=+. ...+++.|.+ +|++|.++.++....++...
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~~fi~~~ 65 (206)
T 1qzu_A 18 RKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKHFYSPQ 65 (206)
T ss_dssp SSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGGSSCGG
T ss_pred CCCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHHHHhCHH
Confidence 35788888888877554 5899999998 89999999998877666544
No 117
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=71.33 E-value=38 Score=27.13 Aligned_cols=141 Identities=13% Similarity=0.125 Sum_probs=80.6
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccce
Q 012744 270 SVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCF 349 (457)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ 349 (457)
+.|-|-.||.+ +....++....++..+..+-+-+.+. ...|+.+. .|+-..+ -..+++ +
T Consensus 8 ~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~Sa------HR~p~~~~----------~~~~~a~-~~g~~V--i 66 (174)
T 3lp6_A 8 PRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSA------HRTPEAMF----------SYARGAA-ARGLEV--I 66 (174)
T ss_dssp CSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHH----------HHHHHHH-HHTCCE--E
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECC------CCCHHHHH----------HHHHHHH-hCCCCE--E
Confidence 45677777654 55667788888888888765555433 44555532 1111100 023445 7
Q ss_pred eeccCcc----hhhhhhhcCCceeccccccc---hhhhHHhhhh-hhceeEE-eeccCCCccCHHHHHHHHHHHhCCHHH
Q 012744 350 MSHCGWN----STTEGVSNGVPFLCWPFFAD---QFMNTTYICD-VWKVGLR-LERNQSGIIGREEIKNKVDQVLGDQNF 420 (457)
Q Consensus 350 I~HgG~~----s~~eal~~GvP~l~~P~~~D---Q~~na~~v~~-~lG~g~~-l~~~~~~~~~~~~l~~~i~~~l~~~~~ 420 (457)
|.=+|.. ++..++ --+|+|.+|...- -.+--.-+.+ --|+.+. +.. ++..++.-++..|-.+ .|+.+
T Consensus 67 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I--~~~~nAa~lAa~Il~~-~d~~l 142 (174)
T 3lp6_A 67 IAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSI--GGAGNAGLLAVRMLGA-ANPQL 142 (174)
T ss_dssp EEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCT--TCHHHHHHHHHHHHHT-TCHHH
T ss_pred EEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEc--CcchHHHHHHHHHHhC-CCHHH
Confidence 7777753 444443 5689999997532 1111111222 0153222 222 2456777777777554 58899
Q ss_pred HHHHHHHHHHHHhhh
Q 012744 421 KARALKLKEKALSSV 435 (457)
Q Consensus 421 ~~~a~~l~~~~~~~~ 435 (457)
+++.+..+++.++.+
T Consensus 143 ~~kl~~~r~~~~~~v 157 (174)
T 3lp6_A 143 RARIVAFQDRLADVV 157 (174)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999998888643
No 118
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=71.29 E-value=35 Score=33.10 Aligned_cols=26 Identities=8% Similarity=0.137 Sum_probs=20.4
Q ss_pred CCeeEEEecCCcchHHHHHHHc-------CCceEEE
Q 012744 106 EKTACLIADGAAGWAIEVAEKM-------KLRRAVV 134 (457)
Q Consensus 106 ~~~D~vv~D~~~~~~~~~A~~l-------giP~v~~ 134 (457)
.+||++|.... +..+|+++ |||++.+
T Consensus 437 ~~pDLlig~s~---~k~~a~~~~~~~~~~giP~iri 469 (523)
T 3u7q_B 437 DKPDFMIGNSY---GKFIQRDTLHKGKEFEVPLIRI 469 (523)
T ss_dssp TCCSEEEECTT---HHHHHHHHHHHCGGGCCCEEEC
T ss_pred cCCCEEEECcc---HHHHHHHhhcccccCCCceEEe
Confidence 79999999953 34566666 9999985
No 119
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=71.20 E-value=16 Score=30.67 Aligned_cols=102 Identities=11% Similarity=0.016 Sum_probs=59.8
Q ss_pred CC-CCEEEEEcCCCCcChHHHHHHHHHHHhCC--CeEEEEeCCc-c---hhHHHhhhcCCCCCCCCeEEEecCCCCCCCC
Q 012744 1 MS-SPHVVVIPNPEQGHVIPLLELSQNLAKHG--LRITFVNSEY-N---HKRVLESLEGKNYIGEQIHLVSIPDGMEPWD 73 (457)
Q Consensus 1 m~-~~~vl~~~~~~~GH~~p~~~la~~L~~~G--h~Vt~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (457)
|. ++||+++..|+.+- +.+|.+++.+.+ ++|..+.+.. . .+...+. |+.+..++..-
T Consensus 5 ~~~~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~---------gIp~~~~~~~~---- 68 (215)
T 3kcq_A 5 MKKELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLLIAQSY---------GIPTFVVKRKP---- 68 (215)
T ss_dssp --CCEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHT---------TCCEEECCBTT----
T ss_pred CCCCCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHc---------CCCEEEeCccc----
Confidence 44 45888887776433 556666665543 7888776532 2 2233444 77777664210
Q ss_pred CcchHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc-hHHHHHHHcCCceEEEechh
Q 012744 74 DRSDMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG-WAIEVAEKMKLRRAVVVITS 138 (457)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 138 (457)
. .+ .++++.+++ .+||+||.=.+.. ....+-+...-.++.++++.
T Consensus 69 ~-~~----------------~~~~~~L~~---~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpSL 114 (215)
T 3kcq_A 69 L-DI----------------EHISTVLRE---HDVDLVCLAGFMSILPEKFVTDWHHKIINIHPSL 114 (215)
T ss_dssp B-CH----------------HHHHHHHHH---TTCSEEEESSCCSCCCHHHHHHTTTSEEEEESSC
T ss_pred C-Ch----------------HHHHHHHHH---hCCCEEEEeCCceEeCHHHHhhccCCeEEECccc
Confidence 0 00 233444444 8999999887644 55666677777888887764
No 120
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=70.74 E-value=51 Score=29.94 Aligned_cols=39 Identities=15% Similarity=0.244 Sum_probs=31.6
Q ss_pred CEEEEEc-CCCCcChHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012744 4 PHVVVIP-NPEQGHVIPLLELSQNLAKHGLRITFVNSEYN 42 (457)
Q Consensus 4 ~~vl~~~-~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~ 42 (457)
++|+|++ -|+.|=-.-...||..|+++|++|.++.....
T Consensus 26 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 26 TKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp CEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred CEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 3455544 45669999999999999999999999998764
No 121
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=70.69 E-value=4.6 Score=35.00 Aligned_cols=41 Identities=17% Similarity=0.196 Sum_probs=33.2
Q ss_pred CCCCEEEEEcCCCC---cChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 1 MSSPHVVVIPNPEQ---GHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 1 m~~~~vl~~~~~~~---GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
|.++|.+|++.|.. |-=.-...|+..|+.||++|+..--.+
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DP 63 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDP 63 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEEC
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeeccc
Confidence 67899999998844 555578899999999999999987544
No 122
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=70.31 E-value=28 Score=27.87 Aligned_cols=145 Identities=15% Similarity=0.153 Sum_probs=81.1
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccce
Q 012744 270 SVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCF 349 (457)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ 349 (457)
+.|-|-.||.+ +.+..++..+.++..+..+-+-+.+. ...|+.+.+ |+...+ -..+++ +
T Consensus 13 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~Sa------HR~p~~~~~----------~~~~a~-~~g~~V--i 71 (174)
T 3kuu_A 13 VKIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVSA------HRTPDRLFS----------FAEQAE-ANGLHV--I 71 (174)
T ss_dssp CCEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHH----------HHHHTT-TTTCSE--E
T ss_pred CcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcc------cCCHHHHHH----------HHHHHH-hCCCcE--E
Confidence 35667777644 55667788888888888876555543 445555331 111000 022344 8
Q ss_pred eeccCcc----hhhhhhhcCCceeccccccc---hhhhHHhhhhhh--ceeEE-eeccCCCccCHHHHHHHHHHHhCCHH
Q 012744 350 MSHCGWN----STTEGVSNGVPFLCWPFFAD---QFMNTTYICDVW--KVGLR-LERNQSGIIGREEIKNKVDQVLGDQN 419 (457)
Q Consensus 350 I~HgG~~----s~~eal~~GvP~l~~P~~~D---Q~~na~~v~~~l--G~g~~-l~~~~~~~~~~~~l~~~i~~~l~~~~ 419 (457)
|.=+|.. ++..++ --+|+|.+|...- -.+--.-+.+ + |+.+. +..++.+..++.-++..|-.+ .|+.
T Consensus 72 Ia~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vq-mP~GvPVatV~I~~a~~~nAa~lAa~ILa~-~d~~ 148 (174)
T 3kuu_A 72 IAGNGGAAHLPGMLAAK-TLVPVLGVPVQSAALSGVDSLYSIVQ-MPRGIPVGTLAIGKAGAANAALLAAQILAL-HDTE 148 (174)
T ss_dssp EEEEESSCCHHHHHHHT-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTSCCEECCSSHHHHHHHHHHHHHHHHT-TCHH
T ss_pred EEECChhhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHhhh-CCCCCeeEEEEeCCccchHHHHHHHHHHcC-CCHH
Confidence 8777753 444443 3589999997432 2221222222 2 54222 222100234566666666544 5899
Q ss_pred HHHHHHHHHHHHHhhhhcC
Q 012744 420 FKARALKLKEKALSSVREG 438 (457)
Q Consensus 420 ~~~~a~~l~~~~~~~~~~~ 438 (457)
++++.++.++++++.+.+.
T Consensus 149 l~~kl~~~r~~~~~~v~~~ 167 (174)
T 3kuu_A 149 LAGRLAHWRQSQTDDVLDN 167 (174)
T ss_dssp HHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 9999999999988765443
No 123
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=70.17 E-value=49 Score=27.91 Aligned_cols=149 Identities=11% Similarity=0.059 Sum_probs=80.7
Q ss_pred HhccCCCCeEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHh-cCCceeecCCCchhh
Q 012744 262 WLDQRQANSVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERV-AARGQMISWSPQQKV 340 (457)
Q Consensus 262 ~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~nv~~~~~~pq~~l 340 (457)
|++-. .++++.|..|.+ -...++.|.+.|..+.++... ..+.+.+.. .+++......-+.+.
T Consensus 26 fl~L~-gk~VLVVGgG~v-------a~~ka~~Ll~~GA~VtVvap~---------~~~~l~~l~~~~~i~~i~~~~~~~d 88 (223)
T 3dfz_A 26 MLDLK-GRSVLVVGGGTI-------ATRRIKGFLQEGAAITVVAPT---------VSAEINEWEAKGQLRVKRKKVGEED 88 (223)
T ss_dssp EECCT-TCCEEEECCSHH-------HHHHHHHHGGGCCCEEEECSS---------CCHHHHHHHHTTSCEEECSCCCGGG
T ss_pred EEEcC-CCEEEEECCCHH-------HHHHHHHHHHCCCEEEEECCC---------CCHHHHHHHHcCCcEEEECCCCHhH
Confidence 44443 355888877743 244556666678887766532 223333222 244554433233455
Q ss_pred ccCCCccceeeccCcchhhhhhh----cCCceeccccccchhhhH-----HhhhhhhceeEEeeccCCCccCHHHHHHHH
Q 012744 341 LTHPSISCFMSHCGWNSTTEGVS----NGVPFLCWPFFADQFMNT-----TYICDVWKVGLRLERNQSGIIGREEIKNKV 411 (457)
Q Consensus 341 l~~~~~~~~I~HgG~~s~~eal~----~GvP~l~~P~~~DQ~~na-----~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i 411 (457)
|..+++ +|.--|.-.+.+.++ .|+|+-+ .|.+..+ ..+.+. ++-+.+...+.+..-+..|++.|
T Consensus 89 L~~adL--VIaAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv~rg-~l~iaIST~G~sP~la~~iR~~i 161 (223)
T 3dfz_A 89 LLNVFF--IVVATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQFSRG-RLSLAISTDGASPLLTKRIKEDL 161 (223)
T ss_dssp SSSCSE--EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEET-TEEEEEECTTSCHHHHHHHHHHH
T ss_pred hCCCCE--EEECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEEEeC-CEEEEEECCCCCcHHHHHHHHHH
Confidence 667777 888777655554433 4666533 2333222 222332 45555554333344567888888
Q ss_pred HHHhCCH--HHHHHHHHHHHHHHhh
Q 012744 412 DQVLGDQ--NFKARALKLKEKALSS 434 (457)
Q Consensus 412 ~~~l~~~--~~~~~a~~l~~~~~~~ 434 (457)
..++... .+-+.+.++++++++.
T Consensus 162 e~~lp~~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 162 SSNYDESYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp HHHSCTHHHHHHHHHHHHHHHHHHC
T ss_pred HHHccHHHHHHHHHHHHHHHHHHHH
Confidence 8888543 5677777777777653
No 124
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=68.95 E-value=23 Score=27.45 Aligned_cols=97 Identities=9% Similarity=0.053 Sum_probs=59.4
Q ss_pred EEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcchHHHHHHHHH
Q 012744 7 VVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSDMRKLLEKRL 86 (457)
Q Consensus 7 l~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (457)
+|++... .+-.-++.+|+.|.+.|+++. ++......+.+. |+....+....+.+.
T Consensus 27 vliSv~d-~dK~~l~~~a~~l~~lGf~i~--AT~GTa~~L~~~---------Gi~v~~v~k~~egg~------------- 81 (143)
T 2yvq_A 27 ILIGIQQ-SFRPRFLGVAEQLHNEGFKLF--ATEATSDWLNAN---------NVPATPVAWPSQEGQ------------- 81 (143)
T ss_dssp EEEECCG-GGHHHHHHHHHHHHTTTCEEE--EEHHHHHHHHHT---------TCCCEEECCGGGC---------------
T ss_pred EEEEecc-cchHHHHHHHHHHHHCCCEEE--ECchHHHHHHHc---------CCeEEEEEeccCCCc-------------
Confidence 4555443 355668899999999999744 344556677765 666555542221100
Q ss_pred HhcchHHHHHHHHHhcCCCCCeeEEEecCCc--------chHHHHHHHcCCceEEE
Q 012744 87 QVMPGKLEGLIEEIHGREGEKTACLIADGAA--------GWAIEVAEKMKLRRAVV 134 (457)
Q Consensus 87 ~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~--------~~~~~~A~~lgiP~v~~ 134 (457)
+...+.+.++++. .+.|+||.-... +.-...|-.++||++.-
T Consensus 82 ~~~~~~i~d~i~~------g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 82 NPSLSSIRKLIRD------GSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp ---CBCHHHHHHT------TSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred ccccccHHHHHHC------CCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcC
Confidence 0000344455555 899999996533 14566788899999873
No 125
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=68.40 E-value=33 Score=30.46 Aligned_cols=38 Identities=16% Similarity=0.459 Sum_probs=29.8
Q ss_pred CEEEEEcC--CCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 4 PHVVVIPN--PEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 4 ~~vl~~~~--~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
+++++++. |+.|=-.-...||..|++.|.+|.++-...
T Consensus 104 ~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 104 NNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp CCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 45554443 566888899999999999999999997544
No 126
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=68.38 E-value=4.6 Score=36.76 Aligned_cols=44 Identities=18% Similarity=0.181 Sum_probs=32.7
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhh
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLES 49 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~ 49 (457)
|+.+||+++-.|+.| ..+|..|+++||+|+++......+.+.+.
T Consensus 1 M~~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~~~~~~~~~~ 44 (335)
T 3ghy_A 1 MSLTRICIVGAGAVG-----GYLGARLALAGEAINVLARGATLQALQTA 44 (335)
T ss_dssp -CCCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCHHHHHHHHHT
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEChHHHHHHHHC
Confidence 778899999777766 45788999999999999875444444443
No 127
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=68.26 E-value=9.6 Score=35.25 Aligned_cols=39 Identities=10% Similarity=0.118 Sum_probs=31.1
Q ss_pred CEEEEEcC-CCCcChHHHHHHHHHHHhCCCeEEEEeCCcch
Q 012744 4 PHVVVIPN-PEQGHVIPLLELSQNLAKHGLRITFVNSEYNH 43 (457)
Q Consensus 4 ~~vl~~~~-~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~ 43 (457)
++++|++. |+.|--.-...+|..|+++|++|.++.. ...
T Consensus 2 ~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~-~~~ 41 (374)
T 3igf_A 2 ALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL-AEP 41 (374)
T ss_dssp CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC-SCS
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC-CCC
Confidence 45666654 4558888899999999999999999998 543
No 128
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=68.17 E-value=9.1 Score=33.31 Aligned_cols=39 Identities=15% Similarity=0.072 Sum_probs=35.4
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
+.+|++.+.++..|-....-++..|..+|++|.+++..-
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~v 161 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDV 161 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEEC
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCC
Confidence 568999999999999999999999999999999887533
No 129
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=67.60 E-value=10 Score=29.45 Aligned_cols=47 Identities=19% Similarity=0.256 Sum_probs=34.3
Q ss_pred CCEEEEEc-CCCC-cChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhh
Q 012744 3 SPHVVVIP-NPEQ-GHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLES 49 (457)
Q Consensus 3 ~~~vl~~~-~~~~-GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~ 49 (457)
-||++++- .|-. ..+--.+=+...|.++||+|++++++.....++-.
T Consensus 6 ~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLleva 54 (157)
T 1kjn_A 6 TGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQVA 54 (157)
T ss_dssp CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred ceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheecc
Confidence 46666544 4433 34444677799999999999999999988777654
No 130
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=67.01 E-value=20 Score=28.55 Aligned_cols=142 Identities=10% Similarity=0.118 Sum_probs=79.6
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccc
Q 012744 269 NSVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISC 348 (457)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~ 348 (457)
+|.|-|-.||.+ +.+..++..+.++..+..+-+-+.+. ...|+.+.+ |+...+ -..+++
T Consensus 6 ~~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~Sa------HR~p~~~~~----------~~~~a~-~~g~~V-- 64 (169)
T 3trh_A 6 KIFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSA------HRTPKETVE----------FVENAD-NRGCAV-- 64 (169)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHH----------HHHHHH-HTTEEE--
T ss_pred CCcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcc------cCCHHHHHH----------HHHHHH-hCCCcE--
Confidence 346777788754 55667788888888888776555543 345554331 111100 012344
Q ss_pred eeeccCcc----hhhhhhhcCCceeccccccc---hhhhHHhhhh--hhceeE-EeeccCCCccCHHHHHHHHHHHhCCH
Q 012744 349 FMSHCGWN----STTEGVSNGVPFLCWPFFAD---QFMNTTYICD--VWKVGL-RLERNQSGIIGREEIKNKVDQVLGDQ 418 (457)
Q Consensus 349 ~I~HgG~~----s~~eal~~GvP~l~~P~~~D---Q~~na~~v~~--~lG~g~-~l~~~~~~~~~~~~l~~~i~~~l~~~ 418 (457)
+|.=+|.. ++..++ --+|+|.+|...- -.+--.-+.+ . |+.+ .+..++.+..++.-++..|-.+ .|+
T Consensus 65 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~-GvPVatV~I~~a~~~nAa~lAa~Il~~-~d~ 141 (169)
T 3trh_A 65 FIAAAGLAAHLAGTIAAH-TLKPVIGVPMAGGSLGGLDALLSTVQMPG-GVPVACTAIGKAGAKNAAILAAQIIAL-QDK 141 (169)
T ss_dssp EEEEECSSCCHHHHHHHT-CSSCEEEEECCCSTTTTHHHHHHHHCCCT-TSCCEECCSTHHHHHHHHHHHHHHHHT-TCH
T ss_pred EEEECChhhhhHHHHHhc-CCCCEEEeecCCCCCCCHHHHHHhhcCCC-CCceEEEecCCccchHHHHHHHHHHcC-CCH
Confidence 78777754 444443 3589999997532 2221222222 2 5431 2222101234566666666444 588
Q ss_pred HHHHHHHHHHHHHHhh
Q 012744 419 NFKARALKLKEKALSS 434 (457)
Q Consensus 419 ~~~~~a~~l~~~~~~~ 434 (457)
.++++.+..+++.++.
T Consensus 142 ~l~~kl~~~r~~~~~~ 157 (169)
T 3trh_A 142 SIAQKLVQQRTAKRET 157 (169)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988864
No 131
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=66.76 E-value=35 Score=33.11 Aligned_cols=26 Identities=4% Similarity=0.149 Sum_probs=21.4
Q ss_pred CCeeEEEecCCcchHHHHHHHc-------CCceEEE
Q 012744 106 EKTACLIADGAAGWAIEVAEKM-------KLRRAVV 134 (457)
Q Consensus 106 ~~~D~vv~D~~~~~~~~~A~~l-------giP~v~~ 134 (457)
.+||++|.+. .+..+|+++ |||++.+
T Consensus 433 ~~pDLiig~~---~~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 433 RQPDFMIGNS---YGKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HCCSEEEECG---GGHHHHHHHHHHCGGGCCCEEEC
T ss_pred cCCCEEEECc---chHHHHHHhhcccccCCCCeEEe
Confidence 6899999985 357778888 9999874
No 132
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=66.01 E-value=6 Score=35.12 Aligned_cols=33 Identities=27% Similarity=0.327 Sum_probs=24.3
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|||++. |+.|.+-. .|++.|.++||+|+.++-.
T Consensus 1 MkILVT--GatGfIG~--~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG--GGTGFIGT--ALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEE--TTTSHHHH--HHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE--CCCCHHHH--HHHHHHHHCCCEEEEEECC
Confidence 566544 55566654 5789999999999999743
No 133
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=65.78 E-value=23 Score=34.52 Aligned_cols=26 Identities=15% Similarity=-0.087 Sum_probs=21.8
Q ss_pred CCeeEEEecCCcchHHHHHHHcCCceEEE
Q 012744 106 EKTACLIADGAAGWAIEVAEKMKLRRAVV 134 (457)
Q Consensus 106 ~~~D~vv~D~~~~~~~~~A~~lgiP~v~~ 134 (457)
.+||+++.. .....+|+++|||++.+
T Consensus 455 ~~pDl~ig~---~~~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 455 LKPDMFFAG---IKEKFVIQKGGVLSKQL 480 (533)
T ss_dssp HCCSEEEEC---HHHHHHHHHTTCEEEET
T ss_pred cCCCEEEcc---cchhHHHHhcCCCEEEe
Confidence 789999987 34678899999999974
No 134
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=65.40 E-value=41 Score=29.57 Aligned_cols=38 Identities=13% Similarity=0.367 Sum_probs=29.6
Q ss_pred CEEEEEc--CCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 4 PHVVVIP--NPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 4 ~~vl~~~--~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
.+++.++ -|+.|=-.-...||..|++.|.+|.++-...
T Consensus 92 ~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 131 (286)
T 3la6_A 92 NNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDM 131 (286)
T ss_dssp CCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCT
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccC
Confidence 4555444 3566888889999999999999999997644
No 135
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=64.84 E-value=13 Score=31.28 Aligned_cols=44 Identities=14% Similarity=0.118 Sum_probs=38.2
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHH
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRV 46 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~ 46 (457)
+.+|++.+.++-.|-....-++..|..+|++|+.+...-..+.+
T Consensus 92 ~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~i 135 (215)
T 3ezx_A 92 AGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENV 135 (215)
T ss_dssp CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHH
T ss_pred CCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHH
Confidence 56999999999999999999999999999999999865544433
No 136
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=64.63 E-value=37 Score=30.43 Aligned_cols=95 Identities=13% Similarity=0.100 Sum_probs=56.9
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchh--------------HHHhhhcCCCCCCCCeEEEecCCCC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHK--------------RVLESLEGKNYIGEQIHLVSIPDGM 69 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (457)
|||+|+-.|..+ +...++|.++||+|..+.+..... ...+. |+.+.. |+.+
T Consensus 5 mrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~---------gIpv~~-~~~~ 69 (317)
T 3rfo_A 5 IKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKH---------GIPVLQ-PLRI 69 (317)
T ss_dssp SEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCCCCEETTTTEECCCHHHHHHHHT---------TCCEEC-CSCT
T ss_pred eEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCCCcccCCCcccCCCHHHHHHHHc---------CCCEEc-cccC
Confidence 699999777543 345677888899999887654321 22222 444432 1111
Q ss_pred CCCCCcchHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc-hHHHHHHHcCCceEEEechh
Q 012744 70 EPWDDRSDMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG-WAIEVAEKMKLRRAVVVITS 138 (457)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 138 (457)
. .+...+.++. .+||++|+=.+.. ....+-+.....++.++++.
T Consensus 70 ----~---------------~~~~~~~l~~------~~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHpSl 114 (317)
T 3rfo_A 70 ----R---------------EKDEYEKVLA------LEPDLIVTAAFGQIVPNEILEAPKYGCINVHASL 114 (317)
T ss_dssp ----T---------------SHHHHHHHHH------HCCSEEEESSCCSCCCHHHHHSSTTCEEEEESSC
T ss_pred ----C---------------CHHHHHHHHh------cCCCEEEEcCchhhCCHHHHhhCcCCEEEECCcc
Confidence 0 0111223333 6899999887643 55555666677789988876
No 137
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=64.52 E-value=32 Score=30.77 Aligned_cols=85 Identities=14% Similarity=0.079 Sum_probs=57.0
Q ss_pred HHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcchHHHHHHHHHHhcchHHHHHHHHHhcCCC
Q 012744 26 NLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSDMRKLLEKRLQVMPGKLEGLIEEIHGREG 105 (457)
Q Consensus 26 ~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 105 (457)
.|.....+..+++++.+..+...+ |++...+. +..... ....+.+.++++.+++
T Consensus 184 ~l~~~~~~~~v~~H~af~Yfa~~y---------Gl~~~~~~-~~~~~~-------------eps~~~l~~l~~~ik~--- 237 (312)
T 2o1e_A 184 TAKKAEKKEFITQHTAFGYLAKEY---------GLKQVPIA-GLSPDQ-------------EPSAASLAKLKTYAKE--- 237 (312)
T ss_dssp HHHSCSCCEEEESSCTTHHHHHHT---------TCEEEECS-SCCSSS-------------CCCHHHHHHHHHHTTS---
T ss_pred HhhccCCCEEEEECCchHHHHHHC---------CCeEEEee-ccCCCC-------------CCCHHHHHHHHHHHHH---
Confidence 344444555667788888888887 78876653 221111 1122356677777776
Q ss_pred CCeeEEEecCCcc--hHHHHHHHcCCceEEEec
Q 012744 106 EKTACLIADGAAG--WAIEVAEKMKLRRAVVVI 136 (457)
Q Consensus 106 ~~~D~vv~D~~~~--~~~~~A~~lgiP~v~~~~ 136 (457)
.+..+|+++.... .+..+|+..|++.+.+.+
T Consensus 238 ~~v~~If~e~~~~~~~~~~ia~e~g~~v~~l~~ 270 (312)
T 2o1e_A 238 HNVKVIYFEEIASSKVADTLASEIGAKTEVLNT 270 (312)
T ss_dssp SCCCEEECSSCCCHHHHHHHHHHTCCEEECCCC
T ss_pred cCCCEEEEeCCCChHHHHHHHHHhCCcEEEecc
Confidence 7899999998776 678899999999877543
No 138
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=64.16 E-value=7.7 Score=35.34 Aligned_cols=41 Identities=10% Similarity=0.242 Sum_probs=33.6
Q ss_pred EEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHH
Q 012744 6 VVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRV 46 (457)
Q Consensus 6 vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~ 46 (457)
+++...|+.|=-.-++.+|..++..|+.|.|++.....+.+
T Consensus 49 iiIaG~pG~GKTt~al~ia~~~a~~g~~Vl~fSlEms~~ql 89 (338)
T 4a1f_A 49 VIIGARPSMGKTSLMMNMVLSALNDDRGVAVFSLEMSAEQL 89 (338)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHTTCEEEEEESSSCHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHcCCeEEEEeCCCCHHHH
Confidence 45666778898888999999999999999999987765544
No 139
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=64.03 E-value=20 Score=34.16 Aligned_cols=87 Identities=14% Similarity=0.125 Sum_probs=51.5
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcchHHHHH
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSDMRKLL 82 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (457)
.+|++++. +-.-...+++.|.+-|-+|+.+.+....+...+.. ...+ ...+.
T Consensus 313 Gkrv~i~~-----~~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~~------~~~v-------------~~~D~---- 364 (458)
T 3pdi_B 313 SARTAIAA-----DPDLLLGFDALLRSMGAHTVAAVVPARAAALVDSP------LPSV-------------RVGDL---- 364 (458)
T ss_dssp TCEEEEEC-----CHHHHHHHHHHHHTTTCEEEEEEESSCCSCCTTTT------SSCE-------------EESHH----
T ss_pred CCEEEEEC-----CcHHHHHHHHHHHHCCCEEEEEEECCCChhhhhCc------cCcE-------------EeCCH----
Confidence 35666643 23455678888888888888877654221111100 0000 00011
Q ss_pred HHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHcCCceEEE
Q 012744 83 EKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAGWAIEVAEKMKLRRAVV 134 (457)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~ 134 (457)
..++++++. .+||++|... ....+|+++|||++.+
T Consensus 365 --------~~le~~i~~------~~pDllig~~---~~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 365 --------EDLEHAARA------GQAQLVIGNS---HALASARRLGVPLLRA 399 (458)
T ss_dssp --------HHHHHHHHH------HTCSEEEECT---THHHHHHHTTCCEEEC
T ss_pred --------HHHHHHHHh------cCCCEEEECh---hHHHHHHHcCCCEEEe
Confidence 024455555 7899999984 4678999999999985
No 140
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=63.22 E-value=31 Score=32.66 Aligned_cols=40 Identities=15% Similarity=0.273 Sum_probs=32.9
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchh
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHK 44 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~ 44 (457)
.|+++..++.|=-.-+..||..|+++|++|.++....+..
T Consensus 102 vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 102 ILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred EEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 3455566677999999999999999999999999776644
No 141
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=62.74 E-value=58 Score=28.91 Aligned_cols=104 Identities=13% Similarity=0.099 Sum_probs=61.4
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhC--CCeEEEEeCC--cchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcchH
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKH--GLRITFVNSE--YNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSDM 78 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~--Gh~Vt~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (457)
++||+++..+. || -+.+|.++-.+- +.+|..+.+. .......+. |+.+..+|..... +
T Consensus 105 ~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~---------gIp~~~~~~~~~~--r---- 166 (302)
T 3o1l_A 105 KKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEWH---------DIPYYHVPVDPKD--K---- 166 (302)
T ss_dssp CCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTT---------TCCEEECCCCSSC--C----
T ss_pred CcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHc---------CCCEEEcCCCcCC--H----
Confidence 67898888776 54 466666665432 3677776642 234444444 7888777632110 0
Q ss_pred HHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc-hHHHHHHHcCCceEEEechh
Q 012744 79 RKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG-WAIEVAEKMKLRRAVVVITS 138 (457)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 138 (457)
......+.++++. .++|+||.=.+.- ....+-+.+.-.++-++++.
T Consensus 167 --------~~~~~~~~~~l~~------~~~DliVlagym~IL~~~~l~~~~~~~INiHpSl 213 (302)
T 3o1l_A 167 --------EPAFAEVSRLVGH------HQADVVVLARYMQILPPQLCREYAHQVINIHHSF 213 (302)
T ss_dssp --------HHHHHHHHHHHHH------TTCSEEEESSCCSCCCTTHHHHTTTCEEEEESSC
T ss_pred --------HHHHHHHHHHHHH------hCCCEEEHhHhhhhcCHHHHhhhhCCeEEeCccc
Confidence 0011223344444 8999998876654 55556666777788887664
No 142
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=62.06 E-value=17 Score=37.13 Aligned_cols=112 Identities=7% Similarity=0.037 Sum_probs=75.7
Q ss_pred cCCCchhhccCCCccceeeccCcchhhhhhhcCCceeccccccchhhhHHhhhhhhceeEEeecc--CCCccCHHHHHHH
Q 012744 333 SWSPQQKVLTHPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLRLERN--QSGIIGREEIKNK 410 (457)
Q Consensus 333 ~~~pq~~ll~~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~g~~l~~~--~~~~~~~~~l~~~ 410 (457)
++.+-.++|..+|+ +||=- .+.+.|.+..++|+|......|+...- .+ |.=..+... +.---+.++|.++
T Consensus 605 ~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~----~r-g~y~d~~~~~pg~~~~~~~eL~~~ 676 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG----LR-GFYMNYMEDLPGPIYTEPYGLAKE 676 (729)
T ss_dssp TCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS----CC-SBSSCTTSSSSSCEESSHHHHHHH
T ss_pred CCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc----cC-CcccChhHhCCCCeECCHHHHHHH
Confidence 45556789999998 99974 458899999999999988877776431 11 321111100 0112478999999
Q ss_pred HHHHhCC-HHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHh
Q 012744 411 VDQVLGD-QNFKARALKLKEKALSSVREGGSSNKAIQNFVQSIK 453 (457)
Q Consensus 411 i~~~l~~-~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 453 (457)
|.....+ ..|+++.++..+++-.. .+|.++.+.++.+++...
T Consensus 677 i~~~~~~~~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 677 LKNLDKVQQQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HTTHHHHHHHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHH
T ss_pred HhhhhccchhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCc
Confidence 9888753 47888888888888754 456667666666665543
No 143
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=61.63 E-value=38 Score=32.21 Aligned_cols=26 Identities=15% Similarity=0.160 Sum_probs=22.4
Q ss_pred CCeeEEEecCCcchHHHHHHHcCCceEEE
Q 012744 106 EKTACLIADGAAGWAIEVAEKMKLRRAVV 134 (457)
Q Consensus 106 ~~~D~vv~D~~~~~~~~~A~~lgiP~v~~ 134 (457)
.+||++|.+. ....+|+++|||++.+
T Consensus 384 ~~pDl~ig~~---~~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 384 EGVDLLISNT---YGKFIAREENIPFVRF 409 (458)
T ss_dssp SCCSEEEESG---GGHHHHHHHTCCEEEC
T ss_pred cCCCEEEeCc---chHHHHHHcCCCEEEe
Confidence 7999999885 4577899999999985
No 144
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=61.56 E-value=10 Score=31.09 Aligned_cols=36 Identities=14% Similarity=0.268 Sum_probs=26.2
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|.+++|+++ |+.|-+- ..++++|.++||+|+.++-.
T Consensus 1 M~~~~ilVt--GatG~iG--~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 1 MAVKKIAIF--GATGQTG--LTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CCCCEEEEE--STTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEE--cCCcHHH--HHHHHHHHHCCCeEEEEEeC
Confidence 666776655 4555443 56789999999999998754
No 145
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=61.48 E-value=54 Score=28.85 Aligned_cols=104 Identities=15% Similarity=0.071 Sum_probs=61.7
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhC--CCeEEEEeCCc--chhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcchH
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKH--GLRITFVNSEY--NHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSDM 78 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~--Gh~Vt~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (457)
|+||+++..+. || -+.+|.++-.+- ..+|..+.+.. ......+. |+.++.+|.....
T Consensus 90 ~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~---------gIp~~~~~~~~~~------- 150 (286)
T 3n0v_A 90 RPKVVIMVSKA-DH--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWH---------KIPYYHFALDPKD------- 150 (286)
T ss_dssp CCEEEEEESSC-CH--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHT---------TCCEEECCCBTTB-------
T ss_pred CcEEEEEEeCC-CC--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHc---------CCCEEEeCCCcCC-------
Confidence 67898888776 43 555666655432 36777665432 33444444 7888887643210
Q ss_pred HHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc-hHHHHHHHcCCceEEEechh
Q 012744 79 RKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG-WAIEVAEKMKLRRAVVVITS 138 (457)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 138 (457)
.......+.+.++. .++|+||.=.+.- ....+-+.+.-.++.++++.
T Consensus 151 -------r~~~~~~~~~~l~~------~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpSl 198 (286)
T 3n0v_A 151 -------KPGQERKVLQVIEE------TGAELVILARYMQVLSPELCRRLDGWAINIHHSL 198 (286)
T ss_dssp -------HHHHHHHHHHHHHH------HTCSEEEESSCCSCCCHHHHHHTTTSEEEEEECS
T ss_pred -------HHHHHHHHHHHHHh------cCCCEEEecccccccCHHHHhhhcCCeEEecccc
Confidence 00111233344444 7899988876654 55666677777888887764
No 146
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=60.61 E-value=23 Score=33.17 Aligned_cols=36 Identities=17% Similarity=0.304 Sum_probs=22.9
Q ss_pred CC--CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 1 MS--SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 1 m~--~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
|. ++|++++..+-. + . -+.++.++.|++|+++.+..
T Consensus 1 M~~~~k~l~Il~~~~~-~-~---~i~~aa~~lG~~vv~v~~~~ 38 (425)
T 3vot_A 1 MTKRNKNLAIICQNKH-L-P---FIFEEAERLGLKVTFFYNSA 38 (425)
T ss_dssp -CCCCCEEEEECCCTT-C-C---HHHHHHHHTTCEEEEEEETT
T ss_pred CCCCCcEEEEECCChh-H-H---HHHHHHHHCCCEEEEEECCC
Confidence 66 356777754432 2 1 35678888899999987543
No 147
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=60.34 E-value=37 Score=29.00 Aligned_cols=31 Identities=13% Similarity=0.237 Sum_probs=26.2
Q ss_pred CCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 11 NPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 11 ~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
-|+.|=-.-...||..|+++|++|.++-...
T Consensus 11 kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 11 KGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp STTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4456888899999999999999999987544
No 148
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=59.98 E-value=60 Score=25.40 Aligned_cols=35 Identities=9% Similarity=0.160 Sum_probs=28.0
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
.+++|+..|+. +.|++.+++.|.++|.+|+++ ...
T Consensus 24 ~~~llIaGG~G--ItPl~sm~~~l~~~~~~v~l~-g~r 58 (158)
T 3lrx_A 24 GKILAIGAYTG--IVEVYPIAKAWQEIGNDVTTL-HVT 58 (158)
T ss_dssp SEEEEEEETTH--HHHHHHHHHHHHHHTCEEEEE-EEC
T ss_pred CeEEEEEccCc--HHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 46676666553 899999999999999999998 544
No 149
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=59.49 E-value=15 Score=32.80 Aligned_cols=40 Identities=13% Similarity=0.201 Sum_probs=30.5
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhh
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLES 49 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~ 49 (457)
+||+++-.|+.| ..+|..|+++||+|+++.... .+.+.+.
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (312)
T 3hn2_A 3 LRIAIVGAGALG-----LYYGALLQRSGEDVHFLLRRD-YEAIAGN 42 (312)
T ss_dssp -CEEEECCSTTH-----HHHHHHHHHTSCCEEEECSTT-HHHHHHT
T ss_pred CEEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcCc-HHHHHhC
Confidence 679999888877 346889999999999998765 4555554
No 150
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=59.25 E-value=86 Score=27.65 Aligned_cols=104 Identities=12% Similarity=0.068 Sum_probs=61.7
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhC--CCeEEEEeCCc--chhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcchH
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKH--GLRITFVNSEY--NHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSDM 78 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~--Gh~Vt~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (457)
++|++++..+. || -+.+|.++-.+- ..+|..+.+.. ......+. |+.++.+|.....
T Consensus 95 ~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~---------gIp~~~~~~~~~~------- 155 (292)
T 3lou_A 95 RPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQH---------GLPFRHFPITADT------- 155 (292)
T ss_dssp CCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHHT---------TCCEEECCCCSSC-------
T ss_pred CCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHHc---------CCCEEEeCCCcCC-------
Confidence 67898888666 54 456666665442 35777665432 33444444 8888887643210
Q ss_pred HHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc-hHHHHHHHcCCceEEEechh
Q 012744 79 RKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG-WAIEVAEKMKLRRAVVVITS 138 (457)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 138 (457)
.......+.+.++. .++|+||.=.+.- ....+-+.+.-.++.++++.
T Consensus 156 -------r~~~~~~~~~~l~~------~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpSl 203 (292)
T 3lou_A 156 -------KAQQEAQWLDVFET------SGAELVILARYMQVLSPEASARLANRAINIHHSF 203 (292)
T ss_dssp -------HHHHHHHHHHHHHH------HTCSEEEESSCCSCCCHHHHHHTTTSEEEEEEEC
T ss_pred -------HHHHHHHHHHHHHH------hCCCEEEecCchhhCCHHHHhhhcCCeEEeCCCc
Confidence 00111233344444 7899988876654 55666677777788887664
No 151
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=58.19 E-value=9.6 Score=34.37 Aligned_cols=35 Identities=9% Similarity=0.107 Sum_probs=28.4
Q ss_pred CCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012744 2 SSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYN 42 (457)
Q Consensus 2 ~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~ 42 (457)
.+++|+++..+ ....+++++.++||+|.++.....
T Consensus 1 m~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~~ 35 (334)
T 2r85_A 1 MKVRIATYASH------SALQILKGAKDEGFETIAFGSSKV 35 (334)
T ss_dssp CCSEEEEESST------THHHHHHHHHHTTCCEEEESCGGG
T ss_pred CceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCCC
Confidence 06889998876 467899999999999999887654
No 152
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=58.00 E-value=12 Score=32.87 Aligned_cols=35 Identities=26% Similarity=0.380 Sum_probs=26.1
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|+.++|+++ |+ |-+- ..|+++|.++||+|+.++-.
T Consensus 1 M~~~~ilVt--Ga-G~iG--~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 1 MSLSKILIA--GC-GDLG--LELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp -CCCCEEEE--CC-SHHH--HHHHHHHHHTTCCEEEEECT
T ss_pred CCCCcEEEE--CC-CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 777788777 34 6444 46789999999999999754
No 153
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=57.71 E-value=5.7 Score=36.52 Aligned_cols=38 Identities=13% Similarity=0.158 Sum_probs=27.5
Q ss_pred CCCCEEEEEcCCCCc-C---hHHHHHHHHHHHhCCCeEEEEe
Q 012744 1 MSSPHVVVIPNPEQG-H---VIPLLELSQNLAKHGLRITFVN 38 (457)
Q Consensus 1 m~~~~vl~~~~~~~G-H---~~p~~~la~~L~~~Gh~Vt~~~ 38 (457)
|+|+||+++..|..+ | +.....++++|.+.||+|+.+.
T Consensus 1 M~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~ 42 (357)
T 4fu0_A 1 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIG 42 (357)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEE
T ss_pred CCCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEE
Confidence 899999888554333 3 2345568999999999999884
No 154
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=57.05 E-value=16 Score=32.75 Aligned_cols=40 Identities=23% Similarity=0.190 Sum_probs=31.2
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhh
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLES 49 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~ 49 (457)
+||+++-.|+.| ..+|..|++.||+|+++.... .+.+.+.
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (320)
T 3i83_A 3 LNILVIGTGAIG-----SFYGALLAKTGHCVSVVSRSD-YETVKAK 42 (320)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHTTCEEEEECSTT-HHHHHHH
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCCh-HHHHHhC
Confidence 789999777776 357889999999999998765 3566555
No 155
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=56.85 E-value=76 Score=25.54 Aligned_cols=145 Identities=13% Similarity=0.119 Sum_probs=81.5
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccc
Q 012744 269 NSVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISC 348 (457)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~ 348 (457)
+|.|-|-+||.+ +.+..++..+.|++.+..+-..+.+. ...|+.+.+ |+-..+ -...++
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SA------HRtp~~l~~----------~~~~a~-~~g~~V-- 80 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSA------HRTPDYMFE----------YAETAR-ERGLKV-- 80 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHH----------HHHHTT-TTTCCE--
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcc------ccChHHHHH----------HHHHHH-hcCceE--
Confidence 457888899865 45678888888888888876666543 445555332 111100 011233
Q ss_pred eeeccCcc----hhhhhhhcCCceecccccc---chhhhHHhhhhhhceeEEeeccCCC---ccCHHHHHHHHHHHhCCH
Q 012744 349 FMSHCGWN----STTEGVSNGVPFLCWPFFA---DQFMNTTYICDVWKVGLRLERNQSG---IIGREEIKNKVDQVLGDQ 418 (457)
Q Consensus 349 ~I~HgG~~----s~~eal~~GvP~l~~P~~~---DQ~~na~~v~~~lG~g~~l~~~~~~---~~~~~~l~~~i~~~l~~~ 418 (457)
+|.=.|.. ++..+ ..-+|+|.+|... +-.+.-.-+.+ +--|+-+..-.-+ ..++.-++..|-. +.|+
T Consensus 81 iIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSivQ-MP~GvpVaTvaig~~ga~NAallA~qILa-~~d~ 157 (181)
T 4b4k_A 81 IIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVATVAIGKAGSTNAGLLAAQILG-SFHD 157 (181)
T ss_dssp EEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHHT-CCTTCCCEECCSSHHHHHHHHHHHHHHHT-TTCH
T ss_pred EEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHHh-CCCCCceEEEecCCccHHHHHHHHHHHHc-cCCH
Confidence 66666643 44444 4568999999853 33333334444 3334333210001 1234445555433 4588
Q ss_pred HHHHHHHHHHHHHHhhhhc
Q 012744 419 NFKARALKLKEKALSSVRE 437 (457)
Q Consensus 419 ~~~~~a~~l~~~~~~~~~~ 437 (457)
+++++.+..+++.++.+.+
T Consensus 158 ~l~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 158 DIHDALELRREAIEKDVRE 176 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999988888875543
No 156
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=56.56 E-value=53 Score=31.57 Aligned_cols=26 Identities=12% Similarity=-0.112 Sum_probs=22.4
Q ss_pred CCeeEEEecCCcchHHHHHHHcCCceEEE
Q 012744 106 EKTACLIADGAAGWAIEVAEKMKLRRAVV 134 (457)
Q Consensus 106 ~~~D~vv~D~~~~~~~~~A~~lgiP~v~~ 134 (457)
.+||++|.. .....+|+++|||++.+
T Consensus 416 ~~pDL~ig~---~~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 416 IKPDLIGSG---IKEKFIFQKMGIPFREM 441 (492)
T ss_dssp HCCSEEEEC---HHHHHHHHHTTCCEEES
T ss_pred cCCcEEEeC---cchhHHHHHcCCCEEec
Confidence 789999997 45678899999999974
No 157
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=56.52 E-value=14 Score=31.85 Aligned_cols=33 Identities=15% Similarity=0.155 Sum_probs=24.4
Q ss_pred CCeeEE-EecCCcc-hHHHHHHHcCCceEEEechh
Q 012744 106 EKTACL-IADGAAG-WAIEVAEKMKLRRAVVVITS 138 (457)
Q Consensus 106 ~~~D~v-v~D~~~~-~~~~~A~~lgiP~v~~~~~~ 138 (457)
..||+| |.|+..- .+..=|.++|||.|.+..+-
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 578875 5676544 67777899999999986554
No 158
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=56.46 E-value=38 Score=32.46 Aligned_cols=27 Identities=22% Similarity=0.119 Sum_probs=22.3
Q ss_pred CCeeEEEecCCcchHHHHHHHcCCceEEEe
Q 012744 106 EKTACLIADGAAGWAIEVAEKMKLRRAVVV 135 (457)
Q Consensus 106 ~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~ 135 (457)
.+||++|... ....+|+++|||++.+.
T Consensus 400 ~~pDL~ig~~---~~~~~a~k~gIP~~~~~ 426 (483)
T 3pdi_A 400 YQADILIAGG---RNMYTALKGRVPFLDIN 426 (483)
T ss_dssp TTCSEEECCG---GGHHHHHHTTCCBCCCC
T ss_pred cCCCEEEECC---chhHHHHHcCCCEEEec
Confidence 8999999863 56678999999998653
No 159
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=56.41 E-value=30 Score=30.41 Aligned_cols=83 Identities=10% Similarity=0.023 Sum_probs=52.9
Q ss_pred HHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcchHHHHHHHHHHhcchHHHHHHHHHhcCCCC
Q 012744 27 LAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSDMRKLLEKRLQVMPGKLEGLIEEIHGREGE 106 (457)
Q Consensus 27 L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 106 (457)
|.....+..+++++.+..+...+ |++...+-...+.. ......+.++++.+++ .
T Consensus 172 l~~~~~~~~v~~H~af~Yf~~~y---------Gl~~~~~~~~~~~~--------------eps~~~l~~l~~~ik~---~ 225 (284)
T 3cx3_A 172 FEKATQKTFVTQHTAFSYLAKRF---------GLNQLGIAGISPEQ--------------EPSPRQLTEIQEFVKT---Y 225 (284)
T ss_dssp HHSCSCCCEEEEESCCHHHHHHT---------TCCEEEEECSSTTC--------------CCCSHHHHHHHHHHHH---T
T ss_pred HhcCCCCEEEEECCchHHHHHHc---------CCEEeeccCCCCCC--------------CCCHHHHHHHHHHHHH---c
Confidence 43334445666777888888887 66655432111111 1112345566666665 7
Q ss_pred CeeEEEecCCcc--hHHHHHHHcCCceEEEe
Q 012744 107 KTACLIADGAAG--WAIEVAEKMKLRRAVVV 135 (457)
Q Consensus 107 ~~D~vv~D~~~~--~~~~~A~~lgiP~v~~~ 135 (457)
+..+|+++.... .+..+|+..|++.+.+.
T Consensus 226 ~v~~if~e~~~~~~~~~~ia~~~g~~v~~l~ 256 (284)
T 3cx3_A 226 KVKTIFTESNASSKVAETLVKSTGVGLKTLN 256 (284)
T ss_dssp TCCCEEECSSSCCHHHHHHHSSSSCCEEECC
T ss_pred CCCEEEEeCCCCcHHHHHHHHHcCCeEEEec
Confidence 899999998766 67889999999988753
No 160
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=55.83 E-value=34 Score=28.75 Aligned_cols=37 Identities=19% Similarity=0.191 Sum_probs=24.9
Q ss_pred CCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012744 2 SSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYN 42 (457)
Q Consensus 2 ~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~ 42 (457)
+.++|+++ |+.|.+- ..|+++|.++||+|+.++-...
T Consensus 20 ~~~~ilVt--GatG~iG--~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 20 QGMRVLVV--GANGKVA--RYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp -CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCeEEEE--CCCChHH--HHHHHHHHhCCCeEEEEECChH
Confidence 35565554 4445444 3678999999999999986443
No 161
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=54.75 E-value=6.6 Score=34.53 Aligned_cols=52 Identities=13% Similarity=0.054 Sum_probs=36.6
Q ss_pred CCccceeeccCcchhhhhhhc------CCceeccccccchhhhHHhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCC
Q 012744 344 PSISCFMSHCGWNSTTEGVSN------GVPFLCWPFFADQFMNTTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGD 417 (457)
Q Consensus 344 ~~~~~~I~HgG~~s~~eal~~------GvP~l~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~ 417 (457)
+++ +|.=||-||+.+++.. ++|++.+|... +|. + ..+.++++.++++++++.
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G~------------lgf---l-----~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHTGH------------LGF---Y-----ADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEESSS------------CCS---S-----CCBCGGGHHHHHHHHHTT
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCCC------------CCc---C-----CcCCHHHHHHHHHHHHcC
Confidence 566 9999999999998764 88998886521 231 1 124567788888887754
No 162
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=54.56 E-value=21 Score=31.48 Aligned_cols=38 Identities=18% Similarity=0.205 Sum_probs=25.1
Q ss_pred CCCCEEEEEc-CCCCcChHH--HHHHHHHHHhCCCeEEEEe
Q 012744 1 MSSPHVVVIP-NPEQGHVIP--LLELSQNLAKHGLRITFVN 38 (457)
Q Consensus 1 m~~~~vl~~~-~~~~GH~~p--~~~la~~L~~~Gh~Vt~~~ 38 (457)
|..|||+++- .|-...++- .-.+++.|.++||+|+++-
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 6788987754 554444443 3456788899999999874
No 163
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=54.53 E-value=11 Score=34.85 Aligned_cols=40 Identities=15% Similarity=0.146 Sum_probs=29.6
Q ss_pred CCCCEEEEEcCCCCc-C---hHHHHHHHHHH-HhCCCeEEEEeCC
Q 012744 1 MSSPHVVVIPNPEQG-H---VIPLLELSQNL-AKHGLRITFVNSE 40 (457)
Q Consensus 1 m~~~~vl~~~~~~~G-H---~~p~~~la~~L-~~~Gh~Vt~~~~~ 40 (457)
|+|+||+++..|-.+ | +.....++++| .++||+|+.+...
T Consensus 1 m~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~ 45 (377)
T 1ehi_A 1 MTKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIA 45 (377)
T ss_dssp --CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred CCCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEc
Confidence 888999998766444 2 33578889999 9999999999643
No 164
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=54.10 E-value=16 Score=34.95 Aligned_cols=96 Identities=11% Similarity=0.043 Sum_probs=44.7
Q ss_pred cChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCC--CCCCC----CCcchHHHHHHHHHHh
Q 012744 15 GHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPD--GMEPW----DDRSDMRKLLEKRLQV 88 (457)
Q Consensus 15 GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~ 88 (457)
.+=.-++.+|+.|.+.|+++. ++......+++. |+....+.+ ++|+. -++-++.-.--.+...
T Consensus 32 ~DK~glv~~Ak~L~~lGfeI~--ATgGTak~L~e~---------GI~v~~V~kvTgfPEil~GRVKTLHP~IhgGiLa~r 100 (534)
T 4ehi_A 32 SDKEGIVEFGKELENLGFEIL--STGGTFKLLKEN---------GIKVIEVSDFTKSPELFEGRVKTLHPKIHGGILHKR 100 (534)
T ss_dssp SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHHT---------TCCCEECBCCC-------------------------
T ss_pred cccccHHHHHHHHHHCCCEEE--EccHHHHHHHHC---------CCceeehhhccCCchhhCCccccCChhhhhhhccCC
Confidence 355568899999999998875 677788888887 676666653 33333 1333333222222211
Q ss_pred cchHHHHHHHHHhcCCCCCeeEEEecCCcchHHHHHH
Q 012744 89 MPGKLEGLIEEIHGREGEKTACLIADGAAGWAIEVAE 125 (457)
Q Consensus 89 ~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~~~~~~A~ 125 (457)
...+-++.+++-.-...|+||++ ++++-..+++
T Consensus 101 ---~~~~h~~~l~~~~I~~iDlVvvN-LYPF~~tv~~ 133 (534)
T 4ehi_A 101 ---SDENHIKQAKENEILGIDLVCVN-LYPFKKTTIM 133 (534)
T ss_dssp ----------------CEEESEEEEE-CCCHHHHHHH
T ss_pred ---CCHHHHHHHHHcCCCceeEEEEe-CcChHHHHhc
Confidence 11122222222221567999999 5555555443
No 165
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=53.81 E-value=8.9 Score=35.05 Aligned_cols=35 Identities=20% Similarity=0.256 Sum_probs=26.0
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|+++||.++-.|..|. .+|..|.++||+|+++...
T Consensus 2 m~~mki~iiG~G~~G~-----~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGH-----AFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp --CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CCcCeEEEECCCHHHH-----HHHHHHHhCCCEEEEEeCC
Confidence 5678999997766553 4688899999999988653
No 166
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=53.50 E-value=66 Score=28.33 Aligned_cols=83 Identities=10% Similarity=-0.011 Sum_probs=56.2
Q ss_pred HHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcchHHHHHHHHHHhcchHHHHHHHHHhcCCCC
Q 012744 27 LAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSDMRKLLEKRLQVMPGKLEGLIEEIHGREGE 106 (457)
Q Consensus 27 L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 106 (457)
|.....+..+++++.+..+...+ |++...+.. . . .....+.+.++++.+++ .
T Consensus 185 l~~~~~~~~v~~H~af~Yf~~~y---------Gl~~~~~~~-~-~--------------~eps~~~l~~l~~~ik~---~ 236 (291)
T 1pq4_A 185 LQPLPQRKFIVFHPSWAYFARDY---------NLVQIPIEV-E-G--------------QEPSAQELKQLIDTAKE---N 236 (291)
T ss_dssp HTTCSCCEEEESSCCCHHHHHHT---------TCEEEESCB-T-T--------------BCCCHHHHHHHHHHHHT---T
T ss_pred HhCCCCCEEEEECCchHHHHHHC---------CCEEeeccc-C-C--------------CCCCHHHHHHHHHHHHH---c
Confidence 33333455666777888888887 788766531 1 0 11222456667777776 8
Q ss_pred CeeEEEecCCcc--hHHHHHHHcCCceEEEech
Q 012744 107 KTACLIADGAAG--WAIEVAEKMKLRRAVVVIT 137 (457)
Q Consensus 107 ~~D~vv~D~~~~--~~~~~A~~lgiP~v~~~~~ 137 (457)
+..+|+++.... .+..+|+..|++.+.+.+.
T Consensus 237 ~v~~If~e~~~~~~~~~~ia~~~g~~v~~ld~l 269 (291)
T 1pq4_A 237 NLTMVFGETQFSTKSSEAIAAEIGAGVELLDPL 269 (291)
T ss_dssp TCCEEEEETTSCCHHHHHHHHHHTCEEEEECTT
T ss_pred CCCEEEEeCCCChHHHHHHHHHcCCeEEEEcCc
Confidence 899999998766 6788999999999876443
No 167
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=52.64 E-value=17 Score=32.70 Aligned_cols=35 Identities=17% Similarity=0.333 Sum_probs=27.1
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhC-C-CeEEEEeCCc
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKH-G-LRITFVNSEY 41 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~-G-h~Vt~~~~~~ 41 (457)
|++++|+++..+.. ..+++.|++. | ++|.++....
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~~ 38 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCSP 38 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESCT
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCCC
Confidence 88999999866554 4789999886 7 8888886543
No 168
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=52.26 E-value=51 Score=31.08 Aligned_cols=39 Identities=13% Similarity=0.168 Sum_probs=32.0
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhC-CCeEEEEeCCcch
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKH-GLRITFVNSEYNH 43 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~-Gh~Vt~~~~~~~~ 43 (457)
.|+|+..++.|=-.-...||..|+++ |++|.++....+.
T Consensus 102 vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r 141 (433)
T 2xxa_A 102 VVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYR 141 (433)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCC
Confidence 34555566779999999999999999 9999999876644
No 169
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=51.95 E-value=9.7 Score=34.67 Aligned_cols=41 Identities=12% Similarity=0.145 Sum_probs=29.3
Q ss_pred CCCCEEEEEcCCCCcChH----HHHHHHHHHHhCCCeEEEEeCCc
Q 012744 1 MSSPHVVVIPNPEQGHVI----PLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~----p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
|+|+||+++..|..+-.. ....++++|.+.||+|+.+....
T Consensus 1 m~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~~ 45 (343)
T 1e4e_A 1 MNRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGITK 45 (343)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECT
T ss_pred CCCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEcC
Confidence 888999888754332222 46678999999999999987533
No 170
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=51.91 E-value=85 Score=29.33 Aligned_cols=140 Identities=11% Similarity=0.071 Sum_probs=79.2
Q ss_pred CCeEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCC-Cc
Q 012744 268 ANSVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHP-SI 346 (457)
Q Consensus 268 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~-~~ 346 (457)
..+.|-|-+||.+ +....++....++..|..+-+-+.+. ...|+...+ ++.+.+- ... +|
T Consensus 264 ~~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~sa------HR~p~~~~~----------~~~~~~~-~g~~~v 324 (425)
T 2h31_A 264 SQCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTSA------HKGPDETLR----------IKAEYEG-DGIPTV 324 (425)
T ss_dssp CCCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHH----------HHHHHHT-TCCCEE
T ss_pred CCCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeeec------cCCHHHHHH----------HHHHHHH-CCCCeE
Confidence 3467888888754 55667778888888888765555433 445554321 1111000 112 24
Q ss_pred cceeeccCcc----hhhhhhhcCCceecccccc-chhhhH-Hhhhh--hhceeEEeeccCCCccCHHHHHHHHHHHhCCH
Q 012744 347 SCFMSHCGWN----STTEGVSNGVPFLCWPFFA-DQFMNT-TYICD--VWKVGLRLERNQSGIIGREEIKNKVDQVLGDQ 418 (457)
Q Consensus 347 ~~~I~HgG~~----s~~eal~~GvP~l~~P~~~-DQ~~na-~~v~~--~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~ 418 (457)
+|.=+|+. ++..++ .-+|+|.+|... .+-..| .-+.+ . |+.+..- ....++.-++..|. -+.|+
T Consensus 325 --iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~vqmp~-g~pvatv---~~~~nAa~~A~~Il-~~~~~ 396 (425)
T 2h31_A 325 --FVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSSLRLPS-GLGCSTV---LSPEGSAQFAAQIF-GLSNH 396 (425)
T ss_dssp --EEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGTSSCCS-SCCCEEC---CCHHHHHHHHHHHH-HTTCH
T ss_pred --EEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHHhcCCC-CCceEEe---cCchHHHHHHHHHH-ccCCH
Confidence 77766653 555554 478999999742 111111 11222 1 4443222 13356677776665 45688
Q ss_pred HHHHHHHHHHHHHHhh
Q 012744 419 NFKARALKLKEKALSS 434 (457)
Q Consensus 419 ~~~~~a~~l~~~~~~~ 434 (457)
..+++.+..++.....
T Consensus 397 ~l~~kl~~~~~~~~~~ 412 (425)
T 2h31_A 397 LVWSKLRASILNTWIS 412 (425)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888888888877764
No 171
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=51.68 E-value=8.9 Score=28.96 Aligned_cols=40 Identities=10% Similarity=0.008 Sum_probs=27.0
Q ss_pred HHHHHHHHhcCCCCCeeEEEecCCcc--hHHHHHHH---cCCceEEEe
Q 012744 93 LEGLIEEIHGREGEKTACLIADGAAG--WAIEVAEK---MKLRRAVVV 135 (457)
Q Consensus 93 ~~~~~~~l~~~~~~~~D~vv~D~~~~--~~~~~A~~---lgiP~v~~~ 135 (457)
-++.++.+.+ .+||+||.|...+ -+..+++. .++|+|.++
T Consensus 42 g~eAl~~~~~---~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 42 MQEALDIARK---GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHHHHHHHH---CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHHHHHHHHh---CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 4455555555 8999999998777 45555544 478876653
No 172
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=51.56 E-value=8.6 Score=33.48 Aligned_cols=53 Identities=9% Similarity=0.074 Sum_probs=38.1
Q ss_pred CCCccceeeccCcchhhhhhhc---CCceeccccccchhhhHHhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCC
Q 012744 343 HPSISCFMSHCGWNSTTEGVSN---GVPFLCWPFFADQFMNTTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGD 417 (457)
Q Consensus 343 ~~~~~~~I~HgG~~s~~eal~~---GvP~l~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~ 417 (457)
.+++ +|+=||-||+.+++.. ++|++.++.. . +|.- ..+.++++.++++.+++.
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~G-----------~-~Gfl--------~~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKAG-----------R-LGFL--------TSYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEESS-----------S-CCSS--------CCBCGGGHHHHHHHHHTT
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEECC-----------C-CCcc--------CcCCHHHHHHHHHHHHcC
Confidence 4566 9999999999999876 8888877532 1 2221 124678888888888764
No 173
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=51.39 E-value=30 Score=31.06 Aligned_cols=38 Identities=13% Similarity=0.141 Sum_probs=31.1
Q ss_pred EEEEEc-CCCCcChHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012744 5 HVVVIP-NPEQGHVIPLLELSQNLAKHGLRITFVNSEYN 42 (457)
Q Consensus 5 ~vl~~~-~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~ 42 (457)
+|+|++ -|+.|=-.-...||..|+++|++|.++.....
T Consensus 15 ~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 53 (324)
T 3zq6_A 15 TFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDPA 53 (324)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred EEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 455544 45669999999999999999999999997663
No 174
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=50.74 E-value=18 Score=32.19 Aligned_cols=35 Identities=14% Similarity=0.214 Sum_probs=25.6
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|+.|||.|+-.|..|. .+|..|.++||+|+++...
T Consensus 1 ~~~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 1 SNAMKIAIAGAGAMGS-----RLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp ---CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CCCCeEEEECcCHHHH-----HHHHHHHhCCCcEEEEECC
Confidence 4567899987666563 5788999999999998753
No 175
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=50.33 E-value=24 Score=26.97 Aligned_cols=43 Identities=5% Similarity=0.007 Sum_probs=30.7
Q ss_pred CEEEEEc-CC--CCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHH
Q 012744 4 PHVVVIP-NP--EQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRV 46 (457)
Q Consensus 4 ~~vl~~~-~~--~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~ 46 (457)
+|++|+. .+ +.......+.+|...++.||+|+++-+..-...+
T Consensus 16 ~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~~l 61 (134)
T 3mc3_A 16 XXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPXLL 61 (134)
T ss_dssp CEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGGGG
T ss_pred ceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHHHH
Confidence 4565544 44 3456678888999999999999998876654433
No 176
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=50.30 E-value=8.1 Score=35.57 Aligned_cols=40 Identities=5% Similarity=0.184 Sum_probs=28.5
Q ss_pred CCCCEEEEEcCCCCcCh----HHHHHHHHHHHhCCCeEEEEeCC
Q 012744 1 MSSPHVVVIPNPEQGHV----IPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~----~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|+|+||+++..|..+-. .....++++|.++||+|+.+...
T Consensus 1 m~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 1 MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp --CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 88899998875543332 24477899999999999998753
No 177
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=50.09 E-value=22 Score=30.17 Aligned_cols=39 Identities=18% Similarity=0.257 Sum_probs=34.3
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
+.+|++..-|+.|=-.-++.+|..|+++|++|.++....
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 467888888899999999999999999999998887654
No 178
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=49.85 E-value=68 Score=29.04 Aligned_cols=100 Identities=9% Similarity=0.063 Sum_probs=58.1
Q ss_pred CEEEEEcCCCCc--Ch--HHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcchHH
Q 012744 4 PHVVVIPNPEQG--HV--IPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSDMR 79 (457)
Q Consensus 4 ~~vl~~~~~~~G--H~--~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (457)
.-|++.|..+.. .+ .-+..+++.|.++|++|+++..+...+...+..... +-....+..
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~-----~~~~~~l~g------------ 248 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQM-----ETKPIVATG------------ 248 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTC-----SSCCEECTT------------
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhc-----ccccEEeeC------------
Confidence 345666655442 22 258999999998999999987776665544331100 000111110
Q ss_pred HHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHcCCceEEEech
Q 012744 80 KLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAGWAIEVAEKMKLRRAVVVIT 137 (457)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~~ 137 (457)
...+.++...+. .-|++|+-. .....+|..+|+|.|.++..
T Consensus 249 ----------~~sl~e~~ali~-----~a~~~i~~D--sG~~HlAaa~g~P~v~lfg~ 289 (349)
T 3tov_A 249 ----------KFQLGPLAAAMN-----RCNLLITND--SGPMHVGISQGVPIVALYGP 289 (349)
T ss_dssp ----------CCCHHHHHHHHH-----TCSEEEEES--SHHHHHHHTTTCCEEEECSS
T ss_pred ----------CCCHHHHHHHHH-----hCCEEEECC--CCHHHHHHhcCCCEEEEECC
Confidence 112333444442 358888742 45677788999999998653
No 179
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=49.75 E-value=35 Score=32.31 Aligned_cols=41 Identities=17% Similarity=0.280 Sum_probs=33.5
Q ss_pred EEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHH
Q 012744 6 VVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRV 46 (457)
Q Consensus 6 vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~ 46 (457)
+++...|+.|=-.-++.+|...+.+|..|.+++.....+.+
T Consensus 200 iiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEms~~ql 240 (444)
T 3bgw_A 200 VLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKKEN 240 (444)
T ss_dssp EEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSSSCTTHH
T ss_pred EEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECCCCHHHH
Confidence 56667788899999999999999889999999987654433
No 180
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=49.69 E-value=14 Score=27.92 Aligned_cols=34 Identities=18% Similarity=0.331 Sum_probs=24.3
Q ss_pred CCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 2 SSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 2 ~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
+.++|+++-. |.+-. .+++.|.++||+|+++...
T Consensus 3 ~~m~i~IiG~---G~iG~--~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 3 HGMYIIIAGI---GRVGY--TLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp --CEEEEECC---SHHHH--HHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECC---CHHHH--HHHHHHHhCCCeEEEEECC
Confidence 4578888732 55543 5789999999999998754
No 181
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=49.23 E-value=40 Score=29.23 Aligned_cols=34 Identities=24% Similarity=0.249 Sum_probs=25.2
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYN 42 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~ 42 (457)
++|+++ |+ |.+-. .|+++|.++||+|+.++-...
T Consensus 6 ~~ilVt--Ga-G~iG~--~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 6 GTLLSF--GH-GYTAR--VLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CEEEEE--TC-CHHHH--HHHHHHGGGTCEEEEEESCGG
T ss_pred CcEEEE--CC-cHHHH--HHHHHHHHCCCEEEEEEcChh
Confidence 566666 35 66654 578999999999999986543
No 182
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=48.76 E-value=16 Score=30.61 Aligned_cols=37 Identities=24% Similarity=0.289 Sum_probs=24.5
Q ss_pred CCC-CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 1 MSS-PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 1 m~~-~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
|++ ++|+++ |+.|.+- ..|++.|.++||+|+.+.-..
T Consensus 1 M~~m~~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 1 MEKVKKIVLI--GASGFVG--SALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp --CCCEEEEE--TCCHHHH--HHHHHHHHTTTCEEEEECSCG
T ss_pred CCCCCEEEEE--cCCchHH--HHHHHHHHHCCCEEEEEEcCc
Confidence 665 455444 4555554 467899999999999987643
No 183
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=48.75 E-value=69 Score=25.75 Aligned_cols=115 Identities=8% Similarity=0.056 Sum_probs=64.2
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceee---cCCCchhhccCCC
Q 012744 269 NSVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMI---SWSPQQKVLTHPS 345 (457)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~---~~~pq~~ll~~~~ 345 (457)
+.+++.-.||.... ....+++.|.+.+..+-++.... ...-+.....+...+.++.. .|+++-.+-..+|
T Consensus 6 k~IllgvTGs~aa~---k~~~ll~~L~~~g~~V~vv~T~~----A~~fi~~~~l~~l~~~v~~~~~~~~~~hi~l~~~aD 78 (175)
T 3qjg_A 6 ENVLICLCGSVNSI---NISHYIIELKSKFDEVNVIASTN----GRKFINGEILKQFCDNYYDEFEDPFLNHVDIANKHD 78 (175)
T ss_dssp CEEEEEECSSGGGG---GHHHHHHHHTTTCSEEEEEECTG----GGGGSCHHHHHHHCSCEECTTTCTTCCHHHHHHTCS
T ss_pred CEEEEEEeCHHHHH---HHHHHHHHHHHCCCEEEEEECcC----HHHHhhHHHHHHhcCCEEecCCCCccccccccchhC
Confidence 34677777776543 24556777777788776665433 11222222233333333221 2355555555555
Q ss_pred ccceeeccCcchhhh-------------hhhcCCceecccccc----ch---hhhHHhhhhhhceeE
Q 012744 346 ISCFMSHCGWNSTTE-------------GVSNGVPFLCWPFFA----DQ---FMNTTYICDVWKVGL 392 (457)
Q Consensus 346 ~~~~I~HgG~~s~~e-------------al~~GvP~l~~P~~~----DQ---~~na~~v~~~lG~g~ 392 (457)
+ .+|.-|-+||+.- ++..++|+++.|-.. +. ..|-.++.+ +|+=+
T Consensus 79 ~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~~i 143 (175)
T 3qjg_A 79 K-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKD-YGVSI 143 (175)
T ss_dssp E-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHH-TTCEE
T ss_pred E-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHH-CCCEE
Confidence 4 4777777775543 477899999999432 21 346667777 47543
No 184
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=48.09 E-value=95 Score=27.67 Aligned_cols=31 Identities=10% Similarity=0.140 Sum_probs=19.4
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCC--CeEEEEe
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHG--LRITFVN 38 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~G--h~Vt~~~ 38 (457)
++|+++ |+.|.+- ..|+++|.++| ++|+.+.
T Consensus 25 ~~vlVt--GatG~iG--~~l~~~L~~~g~~~~v~~~~ 57 (346)
T 4egb_A 25 MNILVT--GGAGFIG--SNFVHYMLQSYETYKIINFD 57 (346)
T ss_dssp EEEEEE--TTTSHHH--HHHHHHHHHHCTTEEEEEEE
T ss_pred CeEEEE--CCccHHH--HHHHHHHHhhCCCcEEEEEe
Confidence 454433 4555554 36789999999 5555554
No 185
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=48.09 E-value=18 Score=32.45 Aligned_cols=42 Identities=12% Similarity=0.180 Sum_probs=30.5
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhh
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLES 49 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~ 49 (457)
++||+++-.|+.| ..+|..|++.||+|+++..+...+.+.+.
T Consensus 19 ~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~~~ 60 (318)
T 3hwr_A 19 GMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIEAT 60 (318)
T ss_dssp -CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHHHH
T ss_pred CCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHHhC
Confidence 6789999777777 45788999999999999443344555544
No 186
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=48.01 E-value=34 Score=29.30 Aligned_cols=41 Identities=22% Similarity=0.420 Sum_probs=28.1
Q ss_pred CCCCEEEEEcCCCC----------cC-hHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 1 MSSPHVVVIPNPEQ----------GH-VIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 1 m~~~~vl~~~~~~~----------GH-~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
|..+||+++..... |- ..=+....+.|.++|++|+++++..
T Consensus 1 m~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g 52 (244)
T 3kkl_A 1 MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETG 52 (244)
T ss_dssp --CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 66678888776532 21 2346777889999999999999753
No 187
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=47.86 E-value=99 Score=24.26 Aligned_cols=134 Identities=15% Similarity=0.161 Sum_probs=75.9
Q ss_pred EEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccceee
Q 012744 272 IYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCFMS 351 (457)
Q Consensus 272 v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~ 351 (457)
|-|-.||.+ +.+..++....++..+..+-.-+.+. ...|+.+.+ |+.+. ..++ +|.
T Consensus 2 V~Iimgs~S--D~~v~~~a~~~l~~~gi~~dv~V~sa------HR~p~~~~~----------~~~~a----~~~V--iIa 57 (157)
T 2ywx_A 2 ICIIMGSES--DLKIAEKAVNILKEFGVEFEVRVASA------HRTPELVEE----------IVKNS----KADV--FIA 57 (157)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT------TTCHHHHHH----------HHHHC----CCSE--EEE
T ss_pred EEEEEccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc------cCCHHHHHH----------HHHhc----CCCE--EEE
Confidence 445566544 55667778888888888765555433 445555321 11100 1144 777
Q ss_pred ccCcc----hhhhhhhcCCceecccccc--chhhhHHhhhhhh--ceeE-EeeccCCCccCHHHHHHHHHHHhCCHHHHH
Q 012744 352 HCGWN----STTEGVSNGVPFLCWPFFA--DQFMNTTYICDVW--KVGL-RLERNQSGIIGREEIKNKVDQVLGDQNFKA 422 (457)
Q Consensus 352 HgG~~----s~~eal~~GvP~l~~P~~~--DQ~~na~~v~~~l--G~g~-~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~ 422 (457)
=+|.. ++..++ .-+|+|.+|... +-.+--.-+.+ + |+.+ .+.. ++..++.-++..|. -+.|++.++
T Consensus 58 ~AG~aa~Lpgvva~~-t~~PVIgVP~~~~l~G~daLlS~vq-mP~gvpVatV~I--~~~~nAa~lA~~Il-~~~d~~l~~ 132 (157)
T 2ywx_A 58 IAGLAAHLPGVVASL-TTKPVIAVPVDAKLDGLDALLSSVQ-MPPGIPVATVGI--DRGENAAILALEIL-ALKDENIAK 132 (157)
T ss_dssp EEESSCCHHHHHHTT-CSSCEEEEEECSSGGGHHHHHHHHS-CCTTSCCEECCT--TCHHHHHHHHHHHH-TTTCHHHHH
T ss_pred EcCchhhhHHHHHhc-cCCCEEEecCCCccCcHHHHHHHhc-CCCCCeeEEEec--CCcHHHHHHHHHHH-hcCCHHHHH
Confidence 66643 444443 368999999821 11111112233 1 5332 2222 35567777777775 456889999
Q ss_pred HHHHHHHHHHhh
Q 012744 423 RALKLKEKALSS 434 (457)
Q Consensus 423 ~a~~l~~~~~~~ 434 (457)
+.+..+++.++.
T Consensus 133 kl~~~r~~~~~~ 144 (157)
T 2ywx_A 133 KLIEYREKMKKK 144 (157)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988864
No 188
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=47.74 E-value=1.2e+02 Score=28.70 Aligned_cols=145 Identities=11% Similarity=0.052 Sum_probs=76.1
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhc-CCceeecCCCchhhccCCCcc
Q 012744 269 NSVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVA-ARGQMISWSPQQKVLTHPSIS 347 (457)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~nv~~~~~~pq~~ll~~~~~~ 347 (457)
+.++.+..|..+ ...++.|.+.+..+.++-.. ..+.+.+... +++.+..---+...|..+++
T Consensus 13 ~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~---------~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~l- 75 (457)
T 1pjq_A 13 RDCLIVGGGDVA-------ERKARLLLEAGARLTVNALT---------FIPQFTVWANEGMLTLVEGPFDETLLDSCWL- 75 (457)
T ss_dssp CEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESS---------CCHHHHHHHTTTSCEEEESSCCGGGGTTCSE-
T ss_pred CEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCC---------CCHHHHHHHhcCCEEEEECCCCccccCCccE-
Confidence 558888777533 34455566678887766642 2223332222 44544322223344556666
Q ss_pred ceeeccCcch-----hhhhhhcCCce--eccccccchhhhHHhhhhh-hceeEEeeccCCCccCHHHHHHHHHHHhCCH-
Q 012744 348 CFMSHCGWNS-----TTEGVSNGVPF--LCWPFFADQFMNTTYICDV-WKVGLRLERNQSGIIGREEIKNKVDQVLGDQ- 418 (457)
Q Consensus 348 ~~I~HgG~~s-----~~eal~~GvP~--l~~P~~~DQ~~na~~v~~~-lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~- 418 (457)
+|.--|.-. ..+|-..|+|+ +--|-..+...-| .+.+. +-+|+. ..+....-+..|++.|...+.+.
T Consensus 76 -Vi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa-~~~~~~l~iaIs--T~Gksp~la~~ir~~ie~~l~~~~ 151 (457)
T 1pjq_A 76 -AIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPS-IIDRSPLMVAVS--SGGTSPVLARLLREKLESLLPQHL 151 (457)
T ss_dssp -EEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCE-EEEETTEEEEEE--CTTSCHHHHHHHHHHHHHHSCTTH
T ss_pred -EEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeee-EEEeCCeEEEEE--CCCCChHHHHHHHHHHHHhcchhH
Confidence 777767653 34456679996 3333323222111 11121 234444 32122233678899999988652
Q ss_pred -HHHHHHHHHHHHHHhh
Q 012744 419 -NFKARALKLKEKALSS 434 (457)
Q Consensus 419 -~~~~~a~~l~~~~~~~ 434 (457)
.+-+.+.++++++++.
T Consensus 152 ~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 152 GQVARYAGQLRARVKKQ 168 (457)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 5666666777766654
No 189
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=47.29 E-value=28 Score=25.45 Aligned_cols=42 Identities=10% Similarity=0.081 Sum_probs=27.6
Q ss_pred HHHHHHHhcCCCCCeeEEEecCCcc--hHHHHHHHc-------CCceEEEechh
Q 012744 94 EGLIEEIHGREGEKTACLIADGAAG--WAIEVAEKM-------KLRRAVVVITS 138 (457)
Q Consensus 94 ~~~~~~l~~~~~~~~D~vv~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 138 (457)
.+.++.+.. .+||+||.|...+ -+..+.+.+ ++|++.++...
T Consensus 36 ~~al~~l~~---~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 36 QIALEKLSE---FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp HHHHHHHTT---BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred HHHHHHHHh---cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 344455544 7899999997665 455555443 58888877643
No 190
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=47.02 E-value=38 Score=24.60 Aligned_cols=39 Identities=8% Similarity=0.144 Sum_probs=30.1
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
|+.+||+++|..+.|-=.-...+-+.+.++|.++.+-..
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~ 39 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAF 39 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 777899999988775445566888889999988766543
No 191
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=46.61 E-value=46 Score=30.37 Aligned_cols=26 Identities=23% Similarity=0.432 Sum_probs=20.7
Q ss_pred CCCccceeeccCcchh---hhhhhcCCceec
Q 012744 343 HPSISCFMSHCGWNST---TEGVSNGVPFLC 370 (457)
Q Consensus 343 ~~~~~~~I~HgG~~s~---~eal~~GvP~l~ 370 (457)
++|+ +|++||.-+. ..|...|+|.++
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEE
Confidence 5677 9999998765 556778999985
No 192
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=46.60 E-value=31 Score=34.60 Aligned_cols=33 Identities=3% Similarity=-0.272 Sum_probs=25.0
Q ss_pred CCeeEEEecCCcc-hHHHHHHHcCCceEEEechh
Q 012744 106 EKTACLIADGAAG-WAIEVAEKMKLRRAVVVITS 138 (457)
Q Consensus 106 ~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 138 (457)
.+||+||+=.+.. ....+-+.....++.++++.
T Consensus 74 ~~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~sl 107 (660)
T 1z7e_A 74 LSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSL 107 (660)
T ss_dssp HCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSS
T ss_pred cCCCEEEEcCcccccCHHHHhcCCCCeEEecCCc
Confidence 7899988876543 55666677778899999884
No 193
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=46.49 E-value=32 Score=27.43 Aligned_cols=42 Identities=10% Similarity=0.157 Sum_probs=28.3
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCC--CeEEEEeCCcch
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHG--LRITFVNSEYNH 43 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~G--h~Vt~~~~~~~~ 43 (457)
|.+++|.++ .++.+++--+...++.|.+-| |+|.+++..+..
T Consensus 4 m~~~~V~Ii-mgS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p 47 (169)
T 3trh_A 4 MNKIFVAIL-MGSDSDLSTMETAFTELKSLGIPFEAHILSAHRTP 47 (169)
T ss_dssp --CCEEEEE-ESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSH
T ss_pred CCCCcEEEE-ECcHHhHHHHHHHHHHHHHcCCCEEEEEEcccCCH
Confidence 566666555 578889988888888888877 555555544433
No 194
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=45.70 E-value=17 Score=32.59 Aligned_cols=24 Identities=8% Similarity=0.101 Sum_probs=19.9
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCcc
Q 012744 19 PLLELSQNLAKHGLRITFVNSEYN 42 (457)
Q Consensus 19 p~~~la~~L~~~Gh~Vt~~~~~~~ 42 (457)
.=.++|+++.++|++|++++.+..
T Consensus 67 mG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 67 RGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHHHCCCEEEEEecCCC
Confidence 345789999999999999997543
No 195
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=45.52 E-value=31 Score=25.43 Aligned_cols=65 Identities=8% Similarity=0.044 Sum_probs=43.3
Q ss_pred ccCCCccceeeccCcch---------hhhhhhcCCceeccccccchhhhHHhhhhhhceeEEeeccCCCccCHHHHHHHH
Q 012744 341 LTHPSISCFMSHCGWNS---------TTEGVSNGVPFLCWPFFADQFMNTTYICDVWKVGLRLERNQSGIIGREEIKNKV 411 (457)
Q Consensus 341 l~~~~~~~~I~HgG~~s---------~~eal~~GvP~l~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i 411 (457)
+..+++ +|-..|..| +-.|...|+|++.+=-+..+.. -..+.+ .|..+ -.++.+.|.++|
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~~-P~~l~~---~a~~i-----V~Wn~~~I~~aI 104 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLENV-PPELEA---VSSEV-----VGWNPHCIRDAL 104 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSCC-CTTHHH---HCSEE-----ECSCHHHHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCcC-CHHHHh---hCcee-----ccCCHHHHHHHH
Confidence 355777 999999888 5567889999987765554421 112333 22223 237899999999
Q ss_pred HHHhC
Q 012744 412 DQVLG 416 (457)
Q Consensus 412 ~~~l~ 416 (457)
+..++
T Consensus 105 ~~~~~ 109 (111)
T 1eiw_A 105 EDALD 109 (111)
T ss_dssp HHHHC
T ss_pred HhccC
Confidence 98763
No 196
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=45.08 E-value=21 Score=24.03 Aligned_cols=47 Identities=21% Similarity=0.221 Sum_probs=31.3
Q ss_pred cCCceeccccccchhhhHHh---hhhhhceeEEeeccCCCccCHHHHHHHHHHHh
Q 012744 364 NGVPFLCWPFFADQFMNTTY---ICDVWKVGLRLERNQSGIIGREEIKNKVDQVL 415 (457)
Q Consensus 364 ~GvP~l~~P~~~DQ~~na~~---v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l 415 (457)
.|+|++++--.+.|.+.-.. ..+. |+...+- ...++++|.+.+++.|
T Consensus 50 ngkplvvfvngasqndvnefqneakke-gvsydvl----kstdpeeltqrvrefl 99 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKE-GVSYDVL----KSTDPEELTQRVREFL 99 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHH-TCEEEEE----ECCCHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhc-Ccchhhh----ccCCHHHHHHHHHHHH
Confidence 58888887776666543322 2333 6666664 4568899999888876
No 197
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=45.03 E-value=26 Score=27.33 Aligned_cols=34 Identities=15% Similarity=0.190 Sum_probs=24.9
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
+++|+++-. |.+- ..+++.|.++|++|+++....
T Consensus 19 ~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECCH
Confidence 568888744 4443 457899999999999987643
No 198
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=44.91 E-value=1.7e+02 Score=26.03 Aligned_cols=103 Identities=16% Similarity=0.176 Sum_probs=55.4
Q ss_pred CEEEEEcCCCC---cChH--HHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcchH
Q 012744 4 PHVVVIPNPEQ---GHVI--PLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSDM 78 (457)
Q Consensus 4 ~~vl~~~~~~~---GH~~--p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (457)
..|++.|.... -.+- -+..+++.|.++|++|.++..+...+......... ..........+..
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~~-~~~~~~~~~~l~g----------- 248 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAAL-NTEQQAWCRNLAG----------- 248 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTS-CHHHHTTEEECTT-----------
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHhh-hhccccceEeccC-----------
Confidence 34556654422 1333 68899999998999999887766544433221000 0000000111110
Q ss_pred HHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHcCCceEEEec
Q 012744 79 RKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAGWAIEVAEKMKLRRAVVVI 136 (457)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~ 136 (457)
...+.++...+. .-|++|+-. .....+|..+|+|+|.++.
T Consensus 249 -----------~~sl~e~~ali~-----~a~l~I~~D--sg~~HlAaa~g~P~v~lfg 288 (348)
T 1psw_A 249 -----------ETQLDQAVILIA-----ACKAIVTND--SGLMHVAAALNRPLVALYG 288 (348)
T ss_dssp -----------TSCHHHHHHHHH-----TSSEEEEES--SHHHHHHHHTTCCEEEEES
T ss_pred -----------cCCHHHHHHHHH-----hCCEEEecC--CHHHHHHHHcCCCEEEEEC
Confidence 012334444442 358887753 4567778889999999864
No 199
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=44.41 E-value=26 Score=29.68 Aligned_cols=40 Identities=18% Similarity=0.332 Sum_probs=34.0
Q ss_pred hHHHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHcCCceEEEec
Q 012744 91 GKLEGLIEEIHGREGEKTACLIADGAAGWAIEVAEKMKLRRAVVVI 136 (457)
Q Consensus 91 ~~~~~~~~~l~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~ 136 (457)
...+..++.+++ .++|+||.| ..+..+|+++|+|.+.+.+
T Consensus 141 ee~~~~i~~l~~---~G~~vVVG~---~~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 141 EDARGQINELKA---NGTEAVVGA---GLITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHH---TTCCEEEES---HHHHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHH---CCCCEEECC---HHHHHHHHHcCCcEEEECC
Confidence 467888888888 789999998 4568899999999999874
No 200
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=44.35 E-value=18 Score=29.85 Aligned_cols=30 Identities=7% Similarity=0.019 Sum_probs=24.8
Q ss_pred CCCccceeeccCcchhhhhhhcCCceecccccc
Q 012744 343 HPSISCFMSHCGWNSTTEGVSNGVPFLCWPFFA 375 (457)
Q Consensus 343 ~~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~ 375 (457)
.+++ +|+.||.......- .++|+|-+|...
T Consensus 51 ~~dV--IISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 51 EVDA--IISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TCSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCeE--EEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 4556 99999999988875 579999999854
No 201
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=44.30 E-value=22 Score=30.11 Aligned_cols=29 Identities=7% Similarity=-0.062 Sum_probs=24.4
Q ss_pred CCccceeeccCcchhhhhhhcCCceecccccc
Q 012744 344 PSISCFMSHCGWNSTTEGVSNGVPFLCWPFFA 375 (457)
Q Consensus 344 ~~~~~~I~HgG~~s~~eal~~GvP~l~~P~~~ 375 (457)
+++ +|+.||.......- .++|+|-++...
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 566 99999999988875 579999999753
No 202
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=43.97 E-value=25 Score=26.83 Aligned_cols=40 Identities=8% Similarity=0.098 Sum_probs=0.0
Q ss_pred HHHHHHHhcCCCCCeeEEEecCCcc--hHHHHHHHc-------CCceEEEec
Q 012744 94 EGLIEEIHGREGEKTACLIADGAAG--WAIEVAEKM-------KLRRAVVVI 136 (457)
Q Consensus 94 ~~~~~~l~~~~~~~~D~vv~D~~~~--~~~~~A~~l-------giP~v~~~~ 136 (457)
.+.++.+.+ .+||+||.|...+ -|..+++.+ .+|++.++.
T Consensus 47 ~~al~~~~~---~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa 95 (134)
T 3to5_A 47 LTALPMLKK---GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITA 95 (134)
T ss_dssp HHHHHHHHH---HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEES
T ss_pred HHHHHHHHh---CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEEC
No 203
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=43.89 E-value=49 Score=27.03 Aligned_cols=62 Identities=19% Similarity=0.297 Sum_probs=37.9
Q ss_pred EEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchh--HHHhhhcCCCCCCCCeEEEecCCC
Q 012744 6 VVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHK--RVLESLEGKNYIGEQIHLVSIPDG 68 (457)
Q Consensus 6 vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 68 (457)
|+|+..+...+-.....+++.|++.|++|.+++...... .++... .....+.+.+++.+|++
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~~~~~l~~la-~~~n~~~~s~~~~~~~~ 173 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQNESALQHFI-DAANSSDSCHLVSIPPS 173 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEESCC---CHHHHHH-HHHCSTTCCEEEEECCC
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeCCCCccHHHHHHH-HhccCCCceEEEEecCc
Confidence 455555555667778899999999999999987533221 122211 11112346788887765
No 204
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=43.52 E-value=16 Score=30.84 Aligned_cols=41 Identities=22% Similarity=0.174 Sum_probs=28.6
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
|++...+++..|..|+..-...+++.|.++|++|..+-.+.
T Consensus 1 me~g~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~G 41 (258)
T 3dqz_A 1 MERKHHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAA 41 (258)
T ss_dssp --CCCEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCTT
T ss_pred CCCCCcEEEECCCCCccccHHHHHHHHHhCCCEEEEecCCC
Confidence 66644555556666666667789999999999998876544
No 205
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=43.40 E-value=15 Score=33.79 Aligned_cols=41 Identities=7% Similarity=0.127 Sum_probs=30.9
Q ss_pred CCCCEEEEEcCCCCcChH----HHHHHHHHHHhCCCeEEEEeCCc
Q 012744 1 MSSPHVVVIPNPEQGHVI----PLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~----p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
|+|+||+++..|..+--. ....++++|.+.||+|+.+....
T Consensus 1 m~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i~~ 45 (364)
T 3i12_A 1 MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGIDK 45 (364)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECT
T ss_pred CCccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEECC
Confidence 889999998877554433 34588999999999999988543
No 206
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=43.19 E-value=52 Score=27.03 Aligned_cols=139 Identities=9% Similarity=0.016 Sum_probs=73.2
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecC-----CCchhhccCC
Q 012744 270 SVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISW-----SPQQKVLTHP 344 (457)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~-----~pq~~ll~~~ 344 (457)
.+++.-.|+..... ...+++.|.+.+..+-++.... ...-+...-.+...++++..-| +.+-++...+
T Consensus 10 ~IllgvTGs~aa~k---~~~l~~~L~~~g~~V~vv~T~~----A~~fi~~~~~~~l~~~v~~~~~~~~~~~~hi~l~~~a 82 (194)
T 1p3y_1 10 KLLIGICGSISSVG---ISSYLLYFKSFFKEIRVVMTKT----AEDLIPAHTVSYFCDHVYSEHGENGKRHSHVEIGRWA 82 (194)
T ss_dssp EEEEEECSCGGGGG---THHHHHHHTTTSSEEEEEECHH----HHHHSCHHHHGGGSSEEECTTCSSSCCCCHHHHHHHC
T ss_pred EEEEEEECHHHHHH---HHHHHHHHHHCCCEEEEEEchh----HHHHHHHHHHHHhcCCEeccccccCCCcCcccccccC
Confidence 36776777764432 3445556655677665554322 0111111112334444322122 2233444445
Q ss_pred CccceeeccCcchhhh-------------hhhcCCceecccccc----ch---hhhHHhhhhhhceeEEeeccC------
Q 012744 345 SISCFMSHCGWNSTTE-------------GVSNGVPFLCWPFFA----DQ---FMNTTYICDVWKVGLRLERNQ------ 398 (457)
Q Consensus 345 ~~~~~I~HgG~~s~~e-------------al~~GvP~l~~P~~~----DQ---~~na~~v~~~lG~g~~l~~~~------ 398 (457)
|+ .+|.-|-+||+.- ++..++|+++.|-.. .. ..|-.++.+ +|+=+.-....
T Consensus 83 D~-~vIaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~~iv~p~~g~~f~la 160 (194)
T 1p3y_1 83 DI-YCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRK-DGHIVIEPVEIMAFEIA 160 (194)
T ss_dssp SE-EEEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHHHH-HTCEECCCBCCC-----
T ss_pred CE-EEEeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHHHH-CCCEEECCCCCcccccc
Confidence 53 3777777776543 256789999999532 22 346677777 58743322211
Q ss_pred -----C--CccCHHHHHHHHHHHhCC
Q 012744 399 -----S--GIIGREEIKNKVDQVLGD 417 (457)
Q Consensus 399 -----~--~~~~~~~l~~~i~~~l~~ 417 (457)
. .-.+.++|.+.+.+.+.+
T Consensus 161 cg~~g~~g~~~~~~~iv~~v~~~l~~ 186 (194)
T 1p3y_1 161 TGTRKPNRGLITPDKALLAIEKGFKE 186 (194)
T ss_dssp -------CBCCCHHHHHHHHHHHCC-
T ss_pred cCCcCcCCCCCCHHHHHHHHHHHhcc
Confidence 1 124678898888888854
No 207
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=43.14 E-value=1.4e+02 Score=24.59 Aligned_cols=145 Identities=14% Similarity=0.019 Sum_probs=74.9
Q ss_pred CeEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCC-CCCCCcCCCchh---HHHHhcCCceeecC--CCchhhcc
Q 012744 269 NSVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPD-ITNDANDAYPEG---FRERVAARGQMISW--SPQQKVLT 342 (457)
Q Consensus 269 ~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~-~~~~~~~~~~~~---~~~~~~~nv~~~~~--~pq~~ll~ 342 (457)
+.+++.-.||.... +....+++.|.+.+..+-++.... ..-.......+. ..+...++-...++ ..+-.+-.
T Consensus 8 k~I~lgiTGs~aa~--~k~~~ll~~L~~~g~eV~vv~T~~A~~~i~~~~~~~~~~~~l~~l~g~~v~~~~~~~~hi~~s~ 85 (201)
T 3lqk_A 8 KHVGFGLTGSHCTY--HEVLPQMERLVELGAKVTPFVTHTVQTTDTKFGESSEWINKIKQITEEPIVDSMVKAEPFGPKT 85 (201)
T ss_dssp CEEEEECCSCGGGG--GGTHHHHHHHHHTTCEEEEECSSCSCCTTCCTTCSCHHHHHHHHHCCSCCBCSHHHHGGGTTTS
T ss_pred CEEEEEEEChHHHH--HHHHHHHHHHhhCCCEEEEEEChhHHHHHHHhhchhHHHHHHHHHhCCCeEeecCccccccccc
Confidence 34667667775433 123445555555677765555432 000000000111 12222333222211 12223323
Q ss_pred CCCccceeeccCcchhhh----------------hhhcCCceecccc----ccchhhhHHhhhhhhceeEEeecc--C-C
Q 012744 343 HPSISCFMSHCGWNSTTE----------------GVSNGVPFLCWPF----FADQFMNTTYICDVWKVGLRLERN--Q-S 399 (457)
Q Consensus 343 ~~~~~~~I~HgG~~s~~e----------------al~~GvP~l~~P~----~~DQ~~na~~v~~~lG~g~~l~~~--~-~ 399 (457)
.+| ..+|.-|-+||+.- ++..++|+++.|- ....+.|-.++.+ +|+=+..+.. . .
T Consensus 86 ~aD-~mvIaP~TanTlAkiA~GiaDnLlt~aa~~~Lk~~~plvl~Pamn~~m~~h~~Nm~~L~~-~G~~i~~P~~~~~~~ 163 (201)
T 3lqk_A 86 PLD-CMVIAPMTGNSTSKFANAMTDSPVLMGAKATLRNGKPVVVGISTNDALGLNGINIMRLMA-TKNIYFIPFGQDNPQ 163 (201)
T ss_dssp CCS-EEEEEEECHHHHHHHHTTCCCSHHHHHHHHHHHTTCCEEEEEEETTTTTTTHHHHHHHHT-STTEEECCEEESCTT
T ss_pred ccC-EEEEccCCHHHHHHHHCcccCcHHHHHHHHHhhcCCCEEEEECCChhHHHhHHHHHHHHH-CCCEEECCCCccccc
Confidence 333 34777777765432 3567999999995 4567779999988 5865554431 0 0
Q ss_pred C-----ccCHHHHHHHHHHHhCC
Q 012744 400 G-----IIGREEIKNKVDQVLGD 417 (457)
Q Consensus 400 ~-----~~~~~~l~~~i~~~l~~ 417 (457)
. ..+-+.|.+.|.+.|++
T Consensus 164 ~~p~s~~a~~~~i~~tv~~al~~ 186 (201)
T 3lqk_A 164 VKPNSLVARMEALPETIEAALRG 186 (201)
T ss_dssp TCTTCEEECGGGHHHHHHHHHTT
T ss_pred cCCCcccCCHHHHHHHHHHHHhc
Confidence 1 12447888899888865
No 208
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=42.65 E-value=49 Score=31.23 Aligned_cols=36 Identities=19% Similarity=0.258 Sum_probs=25.7
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
|..+||+++.. |. -...+++++++.|++|+++.+..
T Consensus 4 m~~~kiLI~g~---g~--~a~~i~~aa~~~G~~~v~v~~~~ 39 (446)
T 3ouz_A 4 MEIKSILIANR---GE--IALRALRTIKEMGKKAICVYSEA 39 (446)
T ss_dssp TCCCEEEECCC---HH--HHHHHHHHHHHTTCEEEEEEEGG
T ss_pred cccceEEEECC---CH--HHHHHHHHHHHcCCEEEEEEcCc
Confidence 44567777532 22 45789999999999999886543
No 209
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=42.19 E-value=69 Score=28.22 Aligned_cols=104 Identities=12% Similarity=0.080 Sum_probs=58.7
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCC--CeEEEEeCCc---chhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcch
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHG--LRITFVNSEY---NHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSD 77 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~G--h~Vt~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (457)
++||+++..+. || -+.+|.++-.+-. .+|.++.+.. ..+...+ -|+.++.+|.....
T Consensus 89 ~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~~---------~gIp~~~~~~~~~~------ 150 (288)
T 3obi_A 89 RRKVMLLVSQS-DH--CLADILYRWRVGDLHMIPTAIVSNHPRETFSGFDF---------GDIPFYHFPVNKDT------ 150 (288)
T ss_dssp CEEEEEEECSC-CH--HHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTTT---------TTCCEEECCCCTTT------
T ss_pred CcEEEEEEcCC-CC--CHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHHH---------cCCCEEEeCCCccc------
Confidence 56888887776 44 4455665554322 4666665432 2222222 37888777643210
Q ss_pred HHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc-hHHHHHHHcCCceEEEechh
Q 012744 78 MRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG-WAIEVAEKMKLRRAVVVITS 138 (457)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 138 (457)
.......+.+.++. .++|+||.=.+.- ....+-+.+.-.++.++++.
T Consensus 151 --------r~~~~~~~~~~l~~------~~~Dlivlagy~~il~~~~l~~~~~~~iNiHpSl 198 (288)
T 3obi_A 151 --------RRQQEAAITALIAQ------THTDLVVLARYMQILSDEMSARLAGRCINIHHSF 198 (288)
T ss_dssp --------HHHHHHHHHHHHHH------HTCCEEEESSCCSCCCHHHHHHTTTSEEEEEEEC
T ss_pred --------HHHHHHHHHHHHHh------cCCCEEEhhhhhhhCCHHHHhhhcCCeEEeCccc
Confidence 01111233344444 7899988876654 55666677777788887663
No 210
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=42.17 E-value=30 Score=26.84 Aligned_cols=44 Identities=9% Similarity=0.220 Sum_probs=33.1
Q ss_pred EEE-EEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHh
Q 012744 5 HVV-VIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLE 48 (457)
Q Consensus 5 ~vl-~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~ 48 (457)
+++ ++..+..-.+.+.+.+|...++.|++|+++.+......+.+
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l~k 53 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAITK 53 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTBH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHHhc
Confidence 444 45555557788899999999999999999998776554443
No 211
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=42.06 E-value=24 Score=29.93 Aligned_cols=21 Identities=19% Similarity=0.419 Sum_probs=17.9
Q ss_pred HHHHHHHHhCCCeEEEEeCCc
Q 012744 21 LELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 21 ~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
.++|++|+++|++|+++..+.
T Consensus 38 ~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 38 FAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp HHHHHHHHHTTCEEEEEECSC
T ss_pred HHHHHHHHHCCCEEEEEECCc
Confidence 578999999999999987654
No 212
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=41.86 E-value=35 Score=29.99 Aligned_cols=39 Identities=10% Similarity=0.128 Sum_probs=27.8
Q ss_pred CCCEEEEEcCCCC-cChH---HHHHHHHHHHhCCCeEEEEeCC
Q 012744 2 SSPHVVVIPNPEQ-GHVI---PLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 2 ~~~~vl~~~~~~~-GH~~---p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
.|+||+++..|.. -|-. ....++++|.++||+|.++...
T Consensus 1 m~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CCcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 1478888875533 2222 4468999999999999998865
No 213
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=41.28 E-value=90 Score=27.44 Aligned_cols=107 Identities=9% Similarity=0.066 Sum_probs=59.8
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhC--CCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcchHHH
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKH--GLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSDMRK 80 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (457)
++||+++..+. || -+.+|.++-.+- ..+|..+.+..... +... ...-|+.++.+|.... +
T Consensus 88 ~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~~~a-~~~~-----A~~~gIp~~~~~~~~~------~--- 149 (287)
T 3nrb_A 88 RKKVVIMVSKF-DH--CLGDLLYRHRLGELDMEVVGIISNHPRE-ALSV-----SLVGDIPFHYLPVTPA------T--- 149 (287)
T ss_dssp CCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSCGG-GCCC-----CCCTTSCEEECCCCGG------G---
T ss_pred CcEEEEEEeCC-Cc--CHHHHHHHHHCCCCCeEEEEEEeCChHH-HHHH-----HHHcCCCEEEEeccCc------c---
Confidence 67898888776 43 455666665443 25777766533221 1111 1113777777653210 0
Q ss_pred HHHHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcc-hHHHHHHHcCCceEEEechh
Q 012744 81 LLEKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAG-WAIEVAEKMKLRRAVVVITS 138 (457)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~~~ 138 (457)
.......+.++++. .++|+||.=.+.- ....+-+.+.-.++-++++.
T Consensus 150 -----r~~~~~~~~~~l~~------~~~Dlivlagym~il~~~~l~~~~~~~iNiHpSl 197 (287)
T 3nrb_A 150 -----KAAQESQIKNIVTQ------SQADLIVLARYMQILSDDLSAFLSGRCINIHHSF 197 (287)
T ss_dssp -----HHHHHHHHHHHHHH------HTCSEEEESSCCSCCCHHHHHHHTTSEEEEESSC
T ss_pred -----hhhHHHHHHHHHHH------hCCCEEEhhhhhhhcCHHHHhhccCCeEEECccc
Confidence 01111223344444 7899988876654 56666777777888887764
No 214
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=40.95 E-value=29 Score=27.52 Aligned_cols=40 Identities=18% Similarity=0.348 Sum_probs=29.6
Q ss_pred CCEEEEEcCCCC---cChHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012744 3 SPHVVVIPNPEQ---GHVIPLLELSQNLAKHGLRITFVNSEYN 42 (457)
Q Consensus 3 ~~~vl~~~~~~~---GH~~p~~~la~~L~~~Gh~Vt~~~~~~~ 42 (457)
..+|+++|.=+. --.++...|++.|.++|.+|.|+.+|-.
T Consensus 23 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPVA 65 (180)
T 1pno_A 23 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPVA 65 (180)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecccc
Confidence 356777664322 2235899999999999999999998753
No 215
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=40.24 E-value=31 Score=28.49 Aligned_cols=34 Identities=12% Similarity=0.154 Sum_probs=23.8
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
|||+++ |+.|.+- ..|+++|.++||+|+.++-..
T Consensus 1 MkvlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGII--GATGRAG--SRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEE--cCCchhH--HHHHHHHHhCCCEEEEEEcCc
Confidence 354443 5555554 478899999999999987643
No 216
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=40.13 E-value=30 Score=27.52 Aligned_cols=40 Identities=15% Similarity=0.329 Sum_probs=29.5
Q ss_pred CCEEEEEcCCCC--c-ChHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012744 3 SPHVVVIPNPEQ--G-HVIPLLELSQNLAKHGLRITFVNSEYN 42 (457)
Q Consensus 3 ~~~vl~~~~~~~--G-H~~p~~~la~~L~~~Gh~Vt~~~~~~~ 42 (457)
..+|+++|.=+. . -.++...|++.|.++|.+|.|+.+|-.
T Consensus 22 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPVA 64 (184)
T 1d4o_A 22 ANSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPVA 64 (184)
T ss_dssp CSEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecccc
Confidence 346777764322 2 235899999999999999999998653
No 217
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=40.08 E-value=43 Score=32.85 Aligned_cols=44 Identities=11% Similarity=0.028 Sum_probs=38.2
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHH
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRV 46 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~ 46 (457)
+.+|++.+.++-.|-....-++..|..+|++|+.++..-..+.+
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~i 141 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKI 141 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHH
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 56899999999999999999999999999999999875544433
No 218
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=39.94 E-value=20 Score=30.80 Aligned_cols=40 Identities=18% Similarity=0.188 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCCC---cChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 2 SSPHVVVIPNPEQ---GHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 2 ~~~~vl~~~~~~~---GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
++||.+|++.|.. |-=.-...|+..|+.||++|+..--.+
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDP 63 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDP 63 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEEC
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCC
Confidence 3789999998854 445578899999999999999876443
No 219
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=39.79 E-value=18 Score=33.54 Aligned_cols=41 Identities=10% Similarity=0.062 Sum_probs=30.7
Q ss_pred CCCCEEEEEcCCCCcChH----HHHHHHHHHHhCCCeEEEEeCCc
Q 012744 1 MSSPHVVVIPNPEQGHVI----PLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~----p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
|+|+||+++..|..+--. ....++++|.+.||+|+.+....
T Consensus 20 m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~~ 64 (386)
T 3e5n_A 20 MRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGIDK 64 (386)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECT
T ss_pred cCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEECC
Confidence 888999888877554433 34588899999999999988544
No 220
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=39.73 E-value=60 Score=27.79 Aligned_cols=37 Identities=16% Similarity=0.108 Sum_probs=24.2
Q ss_pred CEEEEEcCCCCcChH-HHHHHHHHHHhCCCeEEEEeCC
Q 012744 4 PHVVVIPNPEQGHVI-PLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~-p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|||+++..-+.-++. .+...++.++.-|-+|.+.+.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 577777666665553 5566777776667777776653
No 221
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=39.31 E-value=43 Score=24.97 Aligned_cols=33 Identities=12% Similarity=0.102 Sum_probs=22.6
Q ss_pred CCeeEEEecCCcc--hHHHHHHHc-------CCceEEEechh
Q 012744 106 EKTACLIADGAAG--WAIEVAEKM-------KLRRAVVVITS 138 (457)
Q Consensus 106 ~~~D~vv~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 138 (457)
.+||+||.|...+ .+..+.+.+ .+|++.++...
T Consensus 47 ~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 47 NLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 7899999997665 344444332 58888877654
No 222
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=39.15 E-value=33 Score=26.15 Aligned_cols=35 Identities=11% Similarity=0.253 Sum_probs=26.2
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYN 42 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~ 42 (457)
+.|++++-.|..| ..+|+.|.++||+|+++.....
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCHH
Confidence 3567777655444 4788999999999999987543
No 223
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=38.59 E-value=19 Score=27.51 Aligned_cols=33 Identities=18% Similarity=0.208 Sum_probs=24.0
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
++++++-. |.+ -..+|+.|.++||+|+++....
T Consensus 7 ~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECCH
Confidence 46777644 443 3578999999999999987643
No 224
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=38.51 E-value=32 Score=30.97 Aligned_cols=34 Identities=12% Similarity=0.116 Sum_probs=28.4
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
.+||.|+-.|+.| +-.+|+.|+++||+|+..-..
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcCC
Confidence 3589999999888 557999999999999987543
No 225
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=38.50 E-value=85 Score=23.80 Aligned_cols=58 Identities=5% Similarity=-0.065 Sum_probs=36.1
Q ss_pred cCCceeccccccchhhhHHhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCCHHHHHHHHHH
Q 012744 364 NGVPFLCWPFFADQFMNTTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQNFKARALKL 427 (457)
Q Consensus 364 ~GvP~l~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~~~~a~~l 427 (457)
..+|+|++--..+.. ......+ .|+--.+. ..++.++|.++|+.++.....+...+++
T Consensus 74 ~~~pii~ls~~~~~~-~~~~~~~-~g~~~~l~----kP~~~~~L~~~i~~~~~~~~~~~~~~~~ 131 (155)
T 1qkk_A 74 PDLPMILVTGHGDIP-MAVQAIQ-DGAYDFIA----KPFAADRLVQSARRAEEKRRLVMENRSL 131 (155)
T ss_dssp TTSCEEEEECGGGHH-HHHHHHH-TTCCEEEE----SSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChH-HHHHHHh-cCCCeEEe----CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478888775544433 3333344 47655564 4589999999999998654443333333
No 226
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=38.25 E-value=46 Score=29.20 Aligned_cols=74 Identities=14% Similarity=0.148 Sum_probs=48.4
Q ss_pred CeEEEEeCCcchhHHHhhhcCCCCCCCCeEEE---ecCCCCCCCCCcchHHHHHHHHHHhcchHHHHHHHHHhcCCCCCe
Q 012744 32 LRITFVNSEYNHKRVLESLEGKNYIGEQIHLV---SIPDGMEPWDDRSDMRKLLEKRLQVMPGKLEGLIEEIHGREGEKT 108 (457)
Q Consensus 32 h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 108 (457)
.+..+++++.+..+...+ |++.. .+..+.++ ..+.+.++++.+++ .+.
T Consensus 174 ~~~~v~~H~af~Yf~~~y---------Gl~~~~~~~~~~~~ep-----------------s~~~l~~l~~~ik~---~~v 224 (284)
T 2prs_A 174 GKGYFVFHDAYGYFEKQF---------GLTPLGHFTVNPEIQP-----------------GAQRLHEIRTQLVE---QKA 224 (284)
T ss_dssp TCCEEEEESCCHHHHHHH---------TCCCCEEEESSTTSCC-----------------CHHHHHHHHHHHHH---TTC
T ss_pred CCeEEEECccHHHHHHHC---------CCeEeEeeccCCCCCC-----------------CHHHHHHHHHHHHH---cCC
Confidence 344566677888888887 44432 22222222 11345556666665 889
Q ss_pred eEEEecCCcc--hHHHHHHHcCCceEEE
Q 012744 109 ACLIADGAAG--WAIEVAEKMKLRRAVV 134 (457)
Q Consensus 109 D~vv~D~~~~--~~~~~A~~lgiP~v~~ 134 (457)
.+|+++.... .+..+|+..|++.+.+
T Consensus 225 ~~if~e~~~~~~~~~~ia~~~g~~v~~l 252 (284)
T 2prs_A 225 TCVFAEPQFRPAVVESVARGTSVRMGTL 252 (284)
T ss_dssp CEEEECTTSCSHHHHHHTTTSCCEEEEC
T ss_pred CEEEEeCCCChHHHHHHHHHcCCeEEEe
Confidence 9999998765 6788899999998764
No 227
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=38.24 E-value=1.4e+02 Score=25.41 Aligned_cols=33 Identities=12% Similarity=0.138 Sum_probs=25.1
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
.|+++++.++.| + =.++|++|+++|++|+++..
T Consensus 11 ~k~vlVTGas~G-I--G~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 11 NKVIVIAGGIKN-L--GALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp TCEEEEETCSSH-H--HHHHHHHHTTSSCEEEEEES
T ss_pred CCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEec
Confidence 367777777654 2 36789999999999998764
No 228
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=38.00 E-value=28 Score=31.41 Aligned_cols=35 Identities=14% Similarity=0.071 Sum_probs=24.9
Q ss_pred CCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 2 SSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 2 ~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
+.++|+++ |+.|.+- ..|+++|.++||+|+.+.-.
T Consensus 24 ~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 24 SPKTWLIT--GVAGFIG--SNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp SCCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CCCeEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 34566554 4555554 46889999999999999753
No 229
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=37.88 E-value=51 Score=23.82 Aligned_cols=43 Identities=12% Similarity=0.135 Sum_probs=27.1
Q ss_pred HHHHHHHhcCCCCCeeEEEecCCcc--hHHHHHH----HcCCceEEEechhh
Q 012744 94 EGLIEEIHGREGEKTACLIADGAAG--WAIEVAE----KMKLRRAVVVITSA 139 (457)
Q Consensus 94 ~~~~~~l~~~~~~~~D~vv~D~~~~--~~~~~A~----~lgiP~v~~~~~~~ 139 (457)
.+.++.+.. .+||+||.|...+ .+..+.+ ..++|.+.++....
T Consensus 36 ~~al~~~~~---~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~~ 84 (120)
T 3f6p_A 36 NEAVEMVEE---LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDS 84 (120)
T ss_dssp HHHHHHHHT---TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESSC
T ss_pred HHHHHHHhh---CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCCC
Confidence 344444444 7899999998665 3444443 34688888765443
No 230
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=37.51 E-value=25 Score=29.95 Aligned_cols=27 Identities=15% Similarity=0.365 Sum_probs=21.1
Q ss_pred CcChHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012744 14 QGHVIPLLELSQNLAKHGLRITFVNSEYN 42 (457)
Q Consensus 14 ~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~ 42 (457)
.|-+- .++|++|.++|++|++++.+..
T Consensus 28 SG~mG--~aiA~~~~~~Ga~V~lv~~~~~ 54 (232)
T 2gk4_A 28 TGHLG--KIITETLLSAGYEVCLITTKRA 54 (232)
T ss_dssp CCHHH--HHHHHHHHHTTCEEEEEECTTS
T ss_pred CCHHH--HHHHHHHHHCCCEEEEEeCCcc
Confidence 55443 5689999999999999987653
No 231
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=37.43 E-value=34 Score=30.22 Aligned_cols=36 Identities=11% Similarity=0.123 Sum_probs=24.7
Q ss_pred CC-CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 1 MS-SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 1 m~-~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|. +++|+++ |+.|.+- ..++++|.++||+|+.++-.
T Consensus 1 M~~~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 1 MDKKSRVLIV--GGTGYIG--KRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp -CCCCCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCS
T ss_pred CCCCCEEEEE--cCCcHHH--HHHHHHHHhCCCcEEEEECC
Confidence 55 4555544 5556654 35788999999999998754
No 232
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=37.40 E-value=20 Score=32.83 Aligned_cols=34 Identities=18% Similarity=0.276 Sum_probs=27.9
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
++||.|+-.|..| ..+|..|+++||+|++.....
T Consensus 29 ~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWG-----TALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCCH
Confidence 6789998887776 368899999999999987643
No 233
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=37.28 E-value=38 Score=30.57 Aligned_cols=27 Identities=11% Similarity=-0.026 Sum_probs=21.3
Q ss_pred CCHHHHHHHHHHHhhcCCcEEEEEcCC
Q 012744 282 LEQNQFQELALGLEICNRSFLWVVRPD 308 (457)
Q Consensus 282 ~~~~~~~~~~~a~~~~~~~~i~~~~~~ 308 (457)
.+.+....+.+++.+...+.||...+.
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG 88 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGG 88 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 355668888999998888988888654
No 234
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=37.28 E-value=34 Score=27.77 Aligned_cols=40 Identities=18% Similarity=0.348 Sum_probs=29.1
Q ss_pred CCEEEEEcCCCC---cChHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012744 3 SPHVVVIPNPEQ---GHVIPLLELSQNLAKHGLRITFVNSEYN 42 (457)
Q Consensus 3 ~~~vl~~~~~~~---GH~~p~~~la~~L~~~Gh~Vt~~~~~~~ 42 (457)
..+|+++|.=+. --.++...|++.|.++|.+|.|+.+|-.
T Consensus 46 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPVA 88 (203)
T 2fsv_C 46 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPVA 88 (203)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CCcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEecccc
Confidence 346677664322 2234789999999999999999998653
No 235
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=37.23 E-value=30 Score=29.64 Aligned_cols=39 Identities=15% Similarity=0.228 Sum_probs=23.0
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
|++++++++.-.--=-..-+-.....|+++|++|++++-
T Consensus 1 ~~~~~vL~v~aHPDDe~l~~Ggtia~~~~~G~~V~vv~l 39 (242)
T 2ixd_A 1 MSGLHILAFGAHADDVEIGMAGTIAKYTKQGYEVGICDL 39 (242)
T ss_dssp -CCCSEEEEESSTTHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCccEEEEEeCCChHHHhHHHHHHHHHHCCCeEEEEEE
Confidence 677777665433222233344555667789999888863
No 236
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=37.12 E-value=55 Score=25.91 Aligned_cols=48 Identities=6% Similarity=0.099 Sum_probs=36.4
Q ss_pred CCCCEEEEEcC-CCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHh
Q 012744 1 MSSPHVVVIPN-PEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLE 48 (457)
Q Consensus 1 m~~~~vl~~~~-~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~ 48 (457)
|++.++.++.+ +..=-+++.+-||..-++-|++|+++.+..-...+++
T Consensus 2 m~~~kl~II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf~Gl~~l~K 50 (160)
T 3pnx_A 2 MENKKMNLLLFSGDYDKALASLIIANAAREMEIEVTIFCAFWGLLLLRD 50 (160)
T ss_dssp CTTCEEEEEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECGGGGGGGBC
T ss_pred CCCCcEEEEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEeehhHHHhcc
Confidence 67667766554 4446677899999999999999999998776555544
No 237
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=36.95 E-value=76 Score=22.78 Aligned_cols=34 Identities=15% Similarity=0.281 Sum_probs=29.0
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCC
Q 012744 271 VIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPD 308 (457)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~ 308 (457)
.||+.|.| +++.++++..-+.+.|.+++..+...
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 57777765 89999999999999999999988754
No 238
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=36.95 E-value=24 Score=30.06 Aligned_cols=33 Identities=12% Similarity=0.212 Sum_probs=27.8
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
++||.|+-.|..|- .||..|+++||+|+.+..+
T Consensus 6 ~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 68999999988874 5899999999999987663
No 239
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=36.54 E-value=42 Score=30.06 Aligned_cols=32 Identities=16% Similarity=0.354 Sum_probs=26.2
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
.++|.|+-.|..| ..+|+.|+++||+|++...
T Consensus 31 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 31 ARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 4689999777777 5688999999999998754
No 240
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=36.52 E-value=35 Score=27.76 Aligned_cols=40 Identities=15% Similarity=0.311 Sum_probs=29.2
Q ss_pred CCEEEEEcCCCC---cChHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012744 3 SPHVVVIPNPEQ---GHVIPLLELSQNLAKHGLRITFVNSEYN 42 (457)
Q Consensus 3 ~~~vl~~~~~~~---GH~~p~~~la~~L~~~Gh~Vt~~~~~~~ 42 (457)
..+|+++|.=+. --.++...|++.|.++|.+|.|+.+|-.
T Consensus 45 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPVA 87 (207)
T 1djl_A 45 ANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPVA 87 (207)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred CCeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCccC
Confidence 346677664322 2245789999999999999999998653
No 241
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=36.20 E-value=25 Score=29.81 Aligned_cols=39 Identities=15% Similarity=0.075 Sum_probs=31.4
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYN 42 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~ 42 (457)
|||+|..-|+.|=-.-...||..|+++|++|.++-....
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 39 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDPD 39 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECTT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 468885555667788899999999999999999875543
No 242
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=36.06 E-value=31 Score=30.91 Aligned_cols=36 Identities=17% Similarity=0.175 Sum_probs=24.3
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|+.++|+++ |+.|.+- ..|+++|.++||+|+.+.-.
T Consensus 1 m~~~~vlVt--GatG~iG--~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 1 MSGKRALIT--GIRGQDG--AYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp --CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEECSC
T ss_pred CCCCEEEEE--CCCChHH--HHHHHHHHHCCCEEEEEECC
Confidence 666776654 4445444 46789999999999998754
No 243
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=36.06 E-value=69 Score=31.09 Aligned_cols=90 Identities=9% Similarity=0.043 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecC--CCCCCC----CCcchHHHHHHHHHHhcch
Q 012744 18 IPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIP--DGMEPW----DDRSDMRKLLEKRLQVMPG 91 (457)
Q Consensus 18 ~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~ 91 (457)
.-++.+|+.|.+.|+++. ++......+.+. |+....+. .++|+. -++-++.-.--.+. .-.+
T Consensus 16 ~~iv~lAk~L~~lGf~I~--ATgGTAk~L~e~---------GI~v~~V~k~TgfPE~l~GRVKTLHP~ihgGiLa-r~~~ 83 (593)
T 1g8m_A 16 AGLVEFARSLNALGLGLI--ASGGTATALRDA---------GLPVRDVSDLTGFPEMLGGRVKTLHPAVHAGILA-RNIP 83 (593)
T ss_dssp TTHHHHHHHHHHTTCEEE--ECHHHHHHHHHT---------TCCCEEHHHHHSCCCBGGGTBSSCSHHHHHHHHC-CSSH
T ss_pred HhHHHHHHHHHHCCCEEE--EchHHHHHHHHC---------CCeEEEeecccCCchhhcCCccccCchhhhhhcc-CCCH
Confidence 447899999999998875 577788888877 66666653 234443 25556655544443 2222
Q ss_pred HHHHHHHHHhcCCCCCeeEEEecCCcchHHHH
Q 012744 92 KLEGLIEEIHGREGEKTACLIADGAAGWAIEV 123 (457)
Q Consensus 92 ~~~~~~~~l~~~~~~~~D~vv~D~~~~~~~~~ 123 (457)
+-++.+.+-.-...|+||++ ++++-..+
T Consensus 84 ---~h~~~l~~~~I~~iDlVvvN-LYPF~~tv 111 (593)
T 1g8m_A 84 ---EDNADMNKQDFSLVRVVVCN-LYPFVKTV 111 (593)
T ss_dssp ---HHHHHHHHTTCCCEEEEEEE-CCCHHHHH
T ss_pred ---HHHHHHHHcCCCceeEEEEe-ccCHHHhh
Confidence 22233332222577999999 55544433
No 244
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=35.77 E-value=17 Score=35.08 Aligned_cols=34 Identities=6% Similarity=0.290 Sum_probs=27.3
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
|+||+++-.|..| +.+|+.|.++|++||++....
T Consensus 42 KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 42 KPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 7799888766445 567899999999999998654
No 245
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=35.70 E-value=35 Score=24.95 Aligned_cols=32 Identities=9% Similarity=0.009 Sum_probs=24.6
Q ss_pred cChHHHHHHHHHHHhC-CC-eEEEEeCCcchhHH
Q 012744 15 GHVIPLLELSQNLAKH-GL-RITFVNSEYNHKRV 46 (457)
Q Consensus 15 GH~~p~~~la~~L~~~-Gh-~Vt~~~~~~~~~~~ 46 (457)
......+.+|..+.+. || +|+++-........
T Consensus 16 ~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~ 49 (117)
T 1jx7_A 16 ESLFNSLRLAIALREQESNLDLRLFLMSDAVTAG 49 (117)
T ss_dssp SHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGG
T ss_pred HHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHH
Confidence 4456678999999998 99 99988876655444
No 246
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=35.68 E-value=59 Score=24.46 Aligned_cols=41 Identities=10% Similarity=0.074 Sum_probs=28.0
Q ss_pred EEEE-EcCCCCcC--hHHHHHHHHHHHhCCCeE-EEEeCCcchhH
Q 012744 5 HVVV-IPNPEQGH--VIPLLELSQNLAKHGLRI-TFVNSEYNHKR 45 (457)
Q Consensus 5 ~vl~-~~~~~~GH--~~p~~~la~~L~~~Gh~V-t~~~~~~~~~~ 45 (457)
|++| ++.+.+|+ ....+.+|.++.+.||+| .++-.......
T Consensus 2 k~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dGV~~ 46 (130)
T 2hy5_A 2 KFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDGVNN 46 (130)
T ss_dssp EEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGGGGG
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechHHHH
Confidence 4444 44444443 456788899999999999 88877654433
No 247
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=35.65 E-value=39 Score=29.92 Aligned_cols=30 Identities=13% Similarity=0.248 Sum_probs=25.0
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEe
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVN 38 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~ 38 (457)
.||.|+-.|..|. ++|+.|.++||+|++..
T Consensus 6 ~kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 6 EKIAFLGLGNLGT-----PIAEILLEAGYELVVWN 35 (297)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEC-
T ss_pred CcEEEEecHHHHH-----HHHHHHHHCCCeEEEEe
Confidence 3799999888884 68999999999998854
No 248
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=35.58 E-value=36 Score=30.02 Aligned_cols=37 Identities=5% Similarity=0.180 Sum_probs=27.8
Q ss_pred CEEEEEcCCCCc---ChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 4 PHVVVIPNPEQG---HVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 4 ~~vl~~~~~~~G---H~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|||+|+..+... .......++++|.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 589998877432 1234567999999999999998764
No 249
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=35.45 E-value=74 Score=27.02 Aligned_cols=41 Identities=20% Similarity=0.286 Sum_probs=28.3
Q ss_pred CCCCEEEEEcCCCC-----------cChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 1 MSSPHVVVIPNPEQ-----------GHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 1 m~~~~vl~~~~~~~-----------GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
|..+||+++..... -...=+....+.|.++|++|+++++..
T Consensus 1 m~m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 1 MAPKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp -CCCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 44457887775422 133557777888999999999999754
No 250
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=35.39 E-value=26 Score=32.05 Aligned_cols=35 Identities=17% Similarity=0.214 Sum_probs=26.2
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|++++|.|+-.|..| ..+|+.|+++||+|+++...
T Consensus 20 m~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 20 FQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred hcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 456899999766555 46789999999999987543
No 251
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=34.98 E-value=48 Score=27.36 Aligned_cols=35 Identities=17% Similarity=0.180 Sum_probs=29.5
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
.++++..|..|+-.-...+++.|+++|+.|...-.
T Consensus 33 p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 33 PIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 56777777888888899999999999999888765
No 252
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=34.97 E-value=2.2e+02 Score=24.48 Aligned_cols=39 Identities=8% Similarity=0.084 Sum_probs=22.3
Q ss_pred CCCCEEEEEcCCCCcChH-H-HHHHHHHHHhCCCeEEEEeC
Q 012744 1 MSSPHVVVIPNPEQGHVI-P-LLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~-p-~~~la~~L~~~Gh~Vt~~~~ 39 (457)
|.+.+|.++.......+. . ...+-+++.++|+++.+..+
T Consensus 1 ~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 41 (297)
T 3rot_A 1 MVRDKYYLITHGSQDPYWTSLFQGAKKAAEELKVDLQILAP 41 (297)
T ss_dssp --CCEEEEECSCCCSHHHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred CceEEEEEEecCCCCchHHHHHHHHHHHHHHhCcEEEEECC
Confidence 677888887665533222 2 33455566667877777654
No 253
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=34.96 E-value=37 Score=29.61 Aligned_cols=37 Identities=22% Similarity=0.409 Sum_probs=24.8
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|.+.|+++++.++.| + =.++|++|+++|++|+++.-.
T Consensus 21 m~~~k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 21 MSRPQTAFVTGVSSG-I--GLAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp ----CEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 445567777777653 2 257899999999999887653
No 254
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=34.92 E-value=40 Score=25.48 Aligned_cols=33 Identities=12% Similarity=0.103 Sum_probs=22.3
Q ss_pred CCeeEEEecCCcc--hHHHHHHHc---------CCceEEEechh
Q 012744 106 EKTACLIADGAAG--WAIEVAEKM---------KLRRAVVVITS 138 (457)
Q Consensus 106 ~~~D~vv~D~~~~--~~~~~A~~l---------giP~v~~~~~~ 138 (457)
.+||+||.|...+ -+..+.+.+ .+|.+.++...
T Consensus 57 ~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~ 100 (143)
T 3m6m_D 57 EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADV 100 (143)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCC
Confidence 7899999997655 455555443 37888776543
No 255
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=34.88 E-value=41 Score=28.41 Aligned_cols=35 Identities=6% Similarity=0.018 Sum_probs=24.5
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
+.+.++++.++.| + =.++++.|+++|++|+++.-.
T Consensus 6 ~~k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 6 EARRVLVYGGRGA-L--GSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp CCCEEEEETTTSH-H--HHHHHHHHHTTTCEEEEEESS
T ss_pred CCCEEEEECCCcH-H--HHHHHHHHHhCCCEEEEEeCC
Confidence 4456666655542 3 257899999999999988643
No 256
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=34.73 E-value=69 Score=28.27 Aligned_cols=74 Identities=11% Similarity=0.082 Sum_probs=48.4
Q ss_pred eEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcchHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEEE
Q 012744 33 RITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSDMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACLI 112 (457)
Q Consensus 33 ~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv 112 (457)
+..+++++.+..+...+ |++...+. +...+.. .....+.++++.+++ .+..+|+
T Consensus 184 ~~~v~~H~af~Yf~~~y---------Gl~~~~~~-~~~~~~e-------------ps~~~l~~l~~~ik~---~~v~~if 237 (294)
T 3hh8_A 184 KLIVTSEGCFKYFSKAY---------GVPSAYIW-EINTEEE-------------GTPDQISSLIEKLKV---IKPSALF 237 (294)
T ss_dssp CCEEEEESCCHHHHHHH---------TCCEEEEE-SSCCSCC-------------CCHHHHHHHHHHHHH---SCCSCEE
T ss_pred cEEEEECChHHHHHHHc---------CCceeecc-ccCCCCC-------------CCHHHHHHHHHHHHH---cCCCEEE
Confidence 55666688888888888 66655432 1111101 111345555666655 7889999
Q ss_pred ecCCcc--hHHHHHHHcCCceE
Q 012744 113 ADGAAG--WAIEVAEKMKLRRA 132 (457)
Q Consensus 113 ~D~~~~--~~~~~A~~lgiP~v 132 (457)
++.... .+..+|+..|++.+
T Consensus 238 ~e~~~~~~~~~~ia~~~g~~v~ 259 (294)
T 3hh8_A 238 VESSVDRRPMETVSKDSGIPIY 259 (294)
T ss_dssp EETTSCSHHHHHHHHHHCCCEE
T ss_pred EeCCCCcHHHHHHHHHhCCcEE
Confidence 998666 67889999999998
No 257
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=34.69 E-value=26 Score=31.15 Aligned_cols=35 Identities=17% Similarity=0.266 Sum_probs=24.1
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
|..++|+++ |+.|.+-. .|+++|.++||+|+++..
T Consensus 1 M~~~~ilVt--GatG~iG~--~l~~~L~~~g~~v~~~~r 35 (321)
T 1e6u_A 1 MAKQRVFIA--GHRGMVGS--AIRRQLEQRGDVELVLRT 35 (321)
T ss_dssp -CCEEEEEE--TTTSHHHH--HHHHHHTTCTTEEEECCC
T ss_pred CCCCEEEEE--CCCcHHHH--HHHHHHHhCCCeEEEEec
Confidence 666776654 55565543 578899999999988653
No 258
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=34.60 E-value=49 Score=28.37 Aligned_cols=36 Identities=19% Similarity=0.297 Sum_probs=25.5
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
|.+.|+++++.++.| +- .++|++|+++|++|++...
T Consensus 1 M~~~k~vlVTGas~g-IG--~aia~~l~~~G~~vv~~~~ 36 (258)
T 3oid_A 1 MEQNKCALVTGSSRG-VG--KAAAIRLAENGYNIVINYA 36 (258)
T ss_dssp --CCCEEEESSCSSH-HH--HHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEecCCch-HH--HHHHHHHHHCCCEEEEEcC
Confidence 666677888776642 22 4789999999999998643
No 259
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=34.60 E-value=44 Score=28.89 Aligned_cols=37 Identities=19% Similarity=0.303 Sum_probs=26.9
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|-+.|+++++.++.| + =.++|+.|+++|++|+++.-.
T Consensus 1 Ml~~k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 1 MVMDKVILITGASGG-I--GEGIARELGVAGAKILLGARR 37 (264)
T ss_dssp CCTTCEEEESSTTSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCEEEEeCCccH-H--HHHHHHHHHHCCCEEEEEECC
Confidence 545567777776652 2 257899999999999988643
No 260
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=34.57 E-value=24 Score=31.38 Aligned_cols=41 Identities=15% Similarity=0.185 Sum_probs=28.6
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhC-----C-CeEEEEeCCcchhHHHh
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKH-----G-LRITFVNSEYNHKRVLE 48 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~-----G-h~Vt~~~~~~~~~~~~~ 48 (457)
+|||.|+-.|..|. .+|..|.++ | |+|+++..+...+.+.+
T Consensus 8 ~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r~~~~~~l~~ 54 (317)
T 2qyt_A 8 PIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIARGAHLEAIRA 54 (317)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECCHHHHHHHHH
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEcHHHHHHHHh
Confidence 46899987776663 568888888 9 99999876322334443
No 261
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=34.52 E-value=88 Score=25.14 Aligned_cols=40 Identities=10% Similarity=0.159 Sum_probs=30.1
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
|+.+||+|+..++.. ..-+....+.|.+.|++|++++...
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 456789998876554 3456667788888999999998754
No 262
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=34.03 E-value=85 Score=27.90 Aligned_cols=41 Identities=17% Similarity=0.280 Sum_probs=32.8
Q ss_pred EEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHH
Q 012744 6 VVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRV 46 (457)
Q Consensus 6 vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~ 46 (457)
+++...|+.|=-.-++.+|...+.+|..|.+++.....+.+
T Consensus 71 ~li~G~pG~GKTtl~l~ia~~~a~~g~~vl~~slE~s~~~l 111 (315)
T 3bh0_A 71 VLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKKEN 111 (315)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHTTTCEEEEEESSSCHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHcCCeEEEEECCCCHHHH
Confidence 45666778898888999999998899999999987665443
No 263
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=33.97 E-value=17 Score=30.57 Aligned_cols=34 Identities=18% Similarity=0.197 Sum_probs=25.1
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
|+.+||.|+-.|..| ..+|+.|.++||+|+++..
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANS 54 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECT
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 445688888655555 4688899999999998544
No 264
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A
Probab=33.83 E-value=1.3e+02 Score=28.93 Aligned_cols=39 Identities=8% Similarity=0.174 Sum_probs=33.3
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcch
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNH 43 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~ 43 (457)
.|+|+..++.|=-.-+..||..|+++|++|.++....+.
T Consensus 103 vI~ivG~~GvGKTTl~~kLA~~l~~~G~kVllVd~D~~r 141 (504)
T 2j37_W 103 VIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFR 141 (504)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEECCSS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhCCCeEEEEeccccc
Confidence 567777778899999999999999999999999875543
No 265
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=33.83 E-value=46 Score=28.73 Aligned_cols=36 Identities=22% Similarity=0.354 Sum_probs=25.8
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
|.+.++++++.++.| + =.++|++|+++|++|+++..
T Consensus 23 m~~~k~vlITGas~g-I--G~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRG-I--GAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp -CCSCEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEcC
Confidence 445677777776552 2 25789999999999988744
No 266
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=33.57 E-value=1.7e+02 Score=25.63 Aligned_cols=39 Identities=13% Similarity=0.256 Sum_probs=31.6
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcch
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNH 43 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~ 43 (457)
.++++..++.|--.-+..||..|+.+|++|.++....+.
T Consensus 100 vi~i~G~~G~GKTT~~~~la~~~~~~g~~v~l~~~D~~r 138 (297)
T 1j8m_F 100 VIMLVGVQGTGKTTTAGKLAYFYKKKGFKVGLVGADVYR 138 (297)
T ss_dssp EEEEECSSCSSTTHHHHHHHHHHHHTTCCEEEEECCCSS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 345555567799999999999999999999999876543
No 267
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=33.32 E-value=34 Score=27.20 Aligned_cols=40 Identities=20% Similarity=0.369 Sum_probs=29.6
Q ss_pred CCEEEEEcCCCC--c-ChHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012744 3 SPHVVVIPNPEQ--G-HVIPLLELSQNLAKHGLRITFVNSEYN 42 (457)
Q Consensus 3 ~~~vl~~~~~~~--G-H~~p~~~la~~L~~~Gh~Vt~~~~~~~ 42 (457)
..+|+++|.=+. . -..+...|++.|.++|.+|.|+.+|-.
T Consensus 30 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPVA 72 (186)
T 2bru_C 30 SHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPVA 72 (186)
T ss_dssp CSEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSSS
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecccc
Confidence 356777764322 2 234899999999999999999998653
No 268
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=32.84 E-value=35 Score=30.87 Aligned_cols=81 Identities=11% Similarity=-0.002 Sum_probs=45.7
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCcccee
Q 012744 271 VIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCFM 350 (457)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I 350 (457)
.|+++-.|-.....+.+..+...|+..+..+.+..... +.... .. -.......+++ +|
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~---------~~~a~----------~~-~~~~~~~~~d~--vv 85 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEK---------IGDAT----------LE-AERAMHENYDV--LI 85 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCS---------TTHHH----------HH-HHHHTTTTCSE--EE
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecC---------cchHH----------HH-HHHHhhcCCCE--EE
Confidence 34444443222223456677788887777765554322 01100 00 01111223455 99
Q ss_pred eccCcchhhhhhh------cCCceecccc
Q 012744 351 SHCGWNSTTEGVS------NGVPFLCWPF 373 (457)
Q Consensus 351 ~HgG~~s~~eal~------~GvP~l~~P~ 373 (457)
.=||-||+.|++. .++|+.++|.
T Consensus 86 v~GGDGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 86 AAGGDGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp EEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred EEcCchHHHHHHHHHHhCCCCCcEEEecC
Confidence 9999999998752 5789999997
No 269
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=32.80 E-value=21 Score=34.23 Aligned_cols=35 Identities=23% Similarity=0.377 Sum_probs=27.6
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|.|++|.|+-.|..| ..||..|+++||+|++....
T Consensus 13 ~~~~~IgvIGlG~MG-----~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMG-----RNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp --CBSEEEECCSHHH-----HHHHHHHHTTTCCEEEECSS
T ss_pred cCCCeEEEEccHHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 778999999888777 46899999999999987643
No 270
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=32.77 E-value=33 Score=28.81 Aligned_cols=37 Identities=16% Similarity=0.232 Sum_probs=23.2
Q ss_pred CCCC-EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 1 MSSP-HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 1 m~~~-~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|+.+ +.++++.++ |-+- ..++++|.++||+|+++.-.
T Consensus 1 M~~~~k~vlVtGas-ggiG--~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 1 MEGMKGAVLITGAS-RGIG--EATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp ---CCCEEEESSTT-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCEEEEECCC-cHHH--HHHHHHHHHCCCEEEEEECC
Confidence 5533 445555444 4333 57899999999999988753
No 271
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=32.76 E-value=40 Score=30.15 Aligned_cols=36 Identities=17% Similarity=0.316 Sum_probs=23.0
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
|.+.+.++++ |+.|-+- ..|+++|.++||+|+.+.-
T Consensus 2 M~~~~~vlVT-GatG~iG--~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 2 MSTKGTILVT-GGAGYIG--SHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp CCSSCEEEEE-TTTSHHH--HHHHHHHHHTTCEEEEECC
T ss_pred CCCCcEEEEe-cCCcHHH--HHHHHHHHHCCCcEEEEec
Confidence 4433333343 3344443 4688999999999999864
No 272
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=32.42 E-value=45 Score=29.65 Aligned_cols=41 Identities=15% Similarity=0.066 Sum_probs=30.8
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcc-hhHHHhh
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYN-HKRVLES 49 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~-~~~~~~~ 49 (457)
+|||+|+-.|+.|- .+|..|+ +||+|+++..... .+.+.+.
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~~~~~~l~~~ 43 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQEQAAAIQSE 43 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCHHHHHHHHhC
Confidence 47899998777774 5688888 9999999987653 3455554
No 273
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=32.33 E-value=36 Score=29.85 Aligned_cols=35 Identities=20% Similarity=0.251 Sum_probs=26.1
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|+-++|.|+-.|..| ..+|+.|+++||+|++....
T Consensus 2 m~~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 2 TGITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp CSCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCCCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 344689888665555 46889999999999987543
No 274
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=32.19 E-value=76 Score=23.42 Aligned_cols=43 Identities=9% Similarity=-0.061 Sum_probs=29.1
Q ss_pred CCCCEEEEEcCCCCcCh--HHHHHHHHHHHhCCCeEEEEeCCcchh
Q 012744 1 MSSPHVVVIPNPEQGHV--IPLLELSQNLAKHGLRITFVNSEYNHK 44 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~--~p~~~la~~L~~~Gh~Vt~~~~~~~~~ 44 (457)
|+|. ++++..+-+|+. .-.+.+|.++...||+|.++-......
T Consensus 1 Mkk~-~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~DGV~ 45 (119)
T 2d1p_B 1 MKRI-AFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGVF 45 (119)
T ss_dssp CCCE-EEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGGGGG
T ss_pred CcEE-EEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehHHHH
Confidence 5443 344555555665 456788999988999999887765443
No 275
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=31.98 E-value=30 Score=30.61 Aligned_cols=33 Identities=9% Similarity=0.056 Sum_probs=26.7
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
++||.|+-.|..|. .+|+.|+++||+|++....
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECSS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 56899997777764 6789999999999988643
No 276
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=31.85 E-value=56 Score=27.45 Aligned_cols=32 Identities=9% Similarity=0.139 Sum_probs=21.7
Q ss_pred EEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 6 VVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 6 vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
.++++. +.|-+- ..++++|+++|++|+++.-.
T Consensus 9 ~vlVTG-asggiG--~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 9 RALVTG-AGKGIG--RDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp EEEEES-TTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred EEEEeC-CCchHH--HHHHHHHHHCCCEEEEEeCC
Confidence 444443 334343 46899999999999887653
No 277
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=31.76 E-value=91 Score=21.87 Aligned_cols=32 Identities=16% Similarity=0.133 Sum_probs=23.7
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
.+|++++..+ ......++.|.+.||+|..+..
T Consensus 57 ~~ivvyC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (100)
T 3foj_A 57 ETYYIICKAG----GRSAQVVQYLEQNGVNAVNVEG 88 (100)
T ss_dssp SEEEEECSSS----HHHHHHHHHHHTTTCEEEEETT
T ss_pred CcEEEEcCCC----chHHHHHHHHHHCCCCEEEecc
Confidence 4688887443 4577889999999998876644
No 278
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=31.61 E-value=51 Score=31.13 Aligned_cols=41 Identities=20% Similarity=0.313 Sum_probs=31.9
Q ss_pred EEEEcCCCCcChHHHHHHHHHHHh-CCCeEEEEeCCcchhHH
Q 012744 6 VVVIPNPEQGHVIPLLELSQNLAK-HGLRITFVNSEYNHKRV 46 (457)
Q Consensus 6 vl~~~~~~~GH~~p~~~la~~L~~-~Gh~Vt~~~~~~~~~~~ 46 (457)
+++...|+.|=-.-++.+|...+. .|..|.+++.....+.+
T Consensus 203 ~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~~l 244 (444)
T 2q6t_A 203 NIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAAQL 244 (444)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHHHH
Confidence 456667788888888999998876 58999999987665433
No 279
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=31.60 E-value=80 Score=22.83 Aligned_cols=43 Identities=12% Similarity=0.173 Sum_probs=26.5
Q ss_pred HHHHHHHhcCCCCCeeEEEecCCcc--hHHHHHHHc-----CCceEEEechhh
Q 012744 94 EGLIEEIHGREGEKTACLIADGAAG--WAIEVAEKM-----KLRRAVVVITSA 139 (457)
Q Consensus 94 ~~~~~~l~~~~~~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~~~ 139 (457)
.+.++.+.. .+||+||.|...+ .+..+.+.+ ++|++.++....
T Consensus 37 ~~~~~~~~~---~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 86 (126)
T 1dbw_A 37 EAFLAFAPD---VRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHGD 86 (126)
T ss_dssp HHHHHHGGG---CCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTTC
T ss_pred HHHHHHHhc---CCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 344444444 6899999997654 344444333 588888766543
No 280
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=31.56 E-value=33 Score=31.65 Aligned_cols=36 Identities=14% Similarity=0.277 Sum_probs=27.4
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
|++++|+++-.|.. =+..|..|+++||+|+++-...
T Consensus 1 m~~~~v~iiG~G~~-----Gl~~A~~l~~~g~~v~v~E~~~ 36 (384)
T 2bi7_A 1 MKSKKILIVGAGFS-----GAVIGRQLAEKGHQVHIIDQRD 36 (384)
T ss_dssp -CCCEEEEECCSHH-----HHHHHHHHHTTTCEEEEEESSS
T ss_pred CCcCCEEEECcCHH-----HHHHHHHHHHCCCcEEEEEecC
Confidence 77888888866643 3567899999999999997543
No 281
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=31.56 E-value=90 Score=29.47 Aligned_cols=32 Identities=25% Similarity=0.322 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
.+||+|+-.|..|= ++|+.|+++||+|+..-.
T Consensus 9 ~k~v~viG~G~sG~-----s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 9 NKKVLVLGLARSGE-----AAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TCEEEEECCTTTHH-----HHHHHHHHTTCEEEEEES
T ss_pred CCEEEEEeeCHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 46899988876652 459999999999999765
No 282
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=31.23 E-value=47 Score=28.63 Aligned_cols=35 Identities=20% Similarity=0.332 Sum_probs=25.4
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
+.|+++++.++.| +- .++|++|+++|++|.++...
T Consensus 24 ~~k~vlITGas~g-IG--~~~a~~l~~~G~~v~~~~~~ 58 (269)
T 3gk3_A 24 AKRVAFVTGGMGG-LG--AAISRRLHDAGMAVAVSHSE 58 (269)
T ss_dssp CCCEEEETTTTSH-HH--HHHHHHHHTTTCEEEEEECS
T ss_pred cCCEEEEECCCch-HH--HHHHHHHHHCCCEEEEEcCC
Confidence 4567777766542 22 57899999999999888743
No 283
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=30.91 E-value=33 Score=31.57 Aligned_cols=30 Identities=33% Similarity=0.486 Sum_probs=24.1
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEe
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVN 38 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~ 38 (457)
|||+++-.|-.| +.+|..|+++||+|+++-
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEEe
Confidence 688888655445 778889999999999984
No 284
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=30.89 E-value=74 Score=24.23 Aligned_cols=42 Identities=10% Similarity=0.024 Sum_probs=26.3
Q ss_pred HHHHHHHhcCCCCCeeEEEecCCcc--hHHHHHHH-------cCCceEEEechh
Q 012744 94 EGLIEEIHGREGEKTACLIADGAAG--WAIEVAEK-------MKLRRAVVVITS 138 (457)
Q Consensus 94 ~~~~~~l~~~~~~~~D~vv~D~~~~--~~~~~A~~-------lgiP~v~~~~~~ 138 (457)
.+.++.+.. .+||+||.|...+ .+..+.+. -.+|++.++...
T Consensus 41 ~~al~~l~~---~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (154)
T 3gt7_A 41 REAVRFLSL---TRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILS 91 (154)
T ss_dssp HHHHHHHTT---CCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCC
T ss_pred HHHHHHHHh---CCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCC
Confidence 444455544 7899999997654 34444432 368888876543
No 285
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=30.73 E-value=27 Score=33.44 Aligned_cols=34 Identities=21% Similarity=0.323 Sum_probs=27.5
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
|++++|.|+-.|..| ..+|..|+++||+|++...
T Consensus 3 m~~~~IgvIG~G~mG-----~~lA~~L~~~G~~V~v~dr 36 (474)
T 2iz1_A 3 MAQANFGVVGMAVMG-----KNLALNVESRGYTVAIYNR 36 (474)
T ss_dssp CTTBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCCcEEEEeeHHHH-----HHHHHHHHhCCCEEEEEcC
Confidence 777889999777666 4578899999999988764
No 286
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=30.63 E-value=65 Score=26.40 Aligned_cols=36 Identities=19% Similarity=0.094 Sum_probs=28.8
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
.++++..|..|...-+..+++.|+++|+.|..+...
T Consensus 29 p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 64 (236)
T 1zi8_A 29 PVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLY 64 (236)
T ss_dssp EEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGG
T ss_pred CEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEecccc
Confidence 456666777777778899999999999998887653
No 287
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=30.48 E-value=35 Score=30.73 Aligned_cols=37 Identities=5% Similarity=-0.057 Sum_probs=24.4
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
|.+++|+++ |+.|.+- ..|+++|.++||+|+.++-..
T Consensus 8 M~~~~IlVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIA--GATGFIG--QFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEE--CTTSHHH--HHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEE--CCCcHHH--HHHHHHHHHCCCCEEEEECCC
Confidence 445565554 4555554 457889999999999998654
No 288
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=30.27 E-value=1.3e+02 Score=27.72 Aligned_cols=93 Identities=15% Similarity=0.078 Sum_probs=52.0
Q ss_pred HHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEE--EecCCCCCCCCCcchHHHHHHHHHHhcchHHHHHHHH
Q 012744 22 ELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHL--VSIPDGMEPWDDRSDMRKLLEKRLQVMPGKLEGLIEE 99 (457)
Q Consensus 22 ~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (457)
.|.+.|.+.|.+|.+++.+...+............ ++.+ ..++ +- ... ..++++.+.
T Consensus 43 ~l~~~l~~~g~r~liVtd~~~~~~~~~~v~~~L~~--g~~~~~~~~~-~~----p~~--------------~~v~~~~~~ 101 (387)
T 3uhj_A 43 KLAAYLAPLGKRALVLIDRVLFDALSERIGKSCGD--SLDIRFERFG-GE----CCT--------------SEIERVRKV 101 (387)
T ss_dssp TTHHHHGGGCSEEEEEECTTTHHHHHHHC--------CCEEEEEECC-SS----CSH--------------HHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEECchHHHHHHHHHHHHHHc--CCCeEEEEcC-CC----CCH--------------HHHHHHHHH
Confidence 45667777788899998877655433222111111 3443 2222 11 110 123344444
Q ss_pred HhcCCCCCeeEEEecCCcc---hHHHHHHHcCCceEEEechh
Q 012744 100 IHGREGEKTACLIADGAAG---WAIEVAEKMKLRRAVVVITS 138 (457)
Q Consensus 100 l~~~~~~~~D~vv~D~~~~---~~~~~A~~lgiP~v~~~~~~ 138 (457)
+++ .++|+||.=.--. .+..+|...++|+|.+-|..
T Consensus 102 ~~~---~~~d~IIavGGGs~~D~AK~iA~~~~~p~i~IPTTa 140 (387)
T 3uhj_A 102 AIE---HGSDILVGVGGGKTADTAKIVAIDTGARIVIAPTIA 140 (387)
T ss_dssp HHH---HTCSEEEEESSHHHHHHHHHHHHHTTCEEEECCSSC
T ss_pred Hhh---cCCCEEEEeCCcHHHHHHHHHHHhcCCCEEEecCcc
Confidence 443 5789998865443 67778888999999976653
No 289
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=30.06 E-value=39 Score=29.42 Aligned_cols=32 Identities=16% Similarity=0.046 Sum_probs=24.5
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|||.|+-.|..| ..+|..|.++||+|+++...
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 467777665555 36889999999999998654
No 290
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=30.00 E-value=71 Score=23.65 Aligned_cols=42 Identities=14% Similarity=0.121 Sum_probs=29.9
Q ss_pred CCEEEEEcCCCC-cCh-HHHHHHHHHHHhCC--CeEEEEeCCcchh
Q 012744 3 SPHVVVIPNPEQ-GHV-IPLLELSQNLAKHG--LRITFVNSEYNHK 44 (457)
Q Consensus 3 ~~~vl~~~~~~~-GH~-~p~~~la~~L~~~G--h~Vt~~~~~~~~~ 44 (457)
++|++|+-+... -.. +-.+.+|....++| |+|.++......+
T Consensus 7 ~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~v~ 52 (117)
T 2fb6_A 7 NDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGASVK 52 (117)
T ss_dssp TSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHHHH
T ss_pred CCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCeee
Confidence 467777666543 222 34677899999999 8999998877655
No 291
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=29.97 E-value=72 Score=23.64 Aligned_cols=32 Identities=9% Similarity=0.061 Sum_probs=21.4
Q ss_pred CCeeEEEecCCcc--hHHHHHHHc-------CCceEEEech
Q 012744 106 EKTACLIADGAAG--WAIEVAEKM-------KLRRAVVVIT 137 (457)
Q Consensus 106 ~~~D~vv~D~~~~--~~~~~A~~l-------giP~v~~~~~ 137 (457)
..||+||.|...+ .+..+.+.+ .+|++.++..
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 46 TPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 6899999997654 344444333 5788887654
No 292
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=29.97 E-value=36 Score=29.47 Aligned_cols=34 Identities=15% Similarity=0.216 Sum_probs=26.7
Q ss_pred EEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 7 VVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 7 l~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
+++..|..|+-.-+..+++.|+++|++|...--+
T Consensus 54 VlllHG~~~s~~~~~~la~~La~~Gy~Via~Dl~ 87 (281)
T 4fbl_A 54 VLVSHGFTGSPQSMRFLAEGFARAGYTVATPRLT 87 (281)
T ss_dssp EEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCC
Confidence 4455777777777888999999999999876544
No 293
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=29.96 E-value=1.1e+02 Score=28.63 Aligned_cols=25 Identities=20% Similarity=0.214 Sum_probs=19.3
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGL 32 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh 32 (457)
.|||+++-.++. -.+||+.|++.++
T Consensus 3 ~mkvlviG~ggr-----e~ala~~l~~s~~ 27 (431)
T 3mjf_A 3 AMNILIIGNGGR-----EHALGWKAAQSPL 27 (431)
T ss_dssp CEEEEEEECSHH-----HHHHHHHHTTCTT
T ss_pred CcEEEEECCCHH-----HHHHHHHHHhCCC
Confidence 579999977753 4578999988875
No 294
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=29.87 E-value=2.6e+02 Score=23.80 Aligned_cols=37 Identities=16% Similarity=0.336 Sum_probs=29.2
Q ss_pred HHHHHHHHHhcCCCCCeeEEEecCCc---chHHHHHHHcCCceEE
Q 012744 92 KLEGLIEEIHGREGEKTACLIADGAA---GWAIEVAEKMKLRRAV 133 (457)
Q Consensus 92 ~~~~~~~~l~~~~~~~~D~vv~D~~~---~~~~~~A~~lgiP~v~ 133 (457)
.++.+++.+++ . .+++.|... +.+..+|+..|+|++.
T Consensus 116 ~m~~vm~~l~~---~--gL~fvDS~Ts~~S~a~~~A~~~gvp~~~ 155 (245)
T 2nly_A 116 IMRAILEVVKE---K--NAFIIDSGTSPHSLIPQLAEELEVPYAT 155 (245)
T ss_dssp HHHHHHHHHHH---T--TCEEEECCCCSSCSHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHH---C--CCEEEcCCCCcccHHHHHHHHcCCCeEE
Confidence 56677777765 3 588999874 3889999999999998
No 295
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=29.84 E-value=41 Score=29.14 Aligned_cols=44 Identities=11% Similarity=0.075 Sum_probs=37.0
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHH--------HHhC-CCeEEEEeCCcchhHH
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQN--------LAKH-GLRITFVNSEYNHKRV 46 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~--------L~~~-Gh~Vt~~~~~~~~~~~ 46 (457)
+.+|++.+.++-.|-....-++.. |..+ |++|+.+...-..+.+
T Consensus 120 ~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~i 172 (262)
T 1xrs_B 120 KIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDF 172 (262)
T ss_dssp CEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHH
T ss_pred CCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHH
Confidence 568999999999999999999987 9999 9999999875554443
No 296
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=29.69 E-value=2.6e+02 Score=24.79 Aligned_cols=76 Identities=7% Similarity=0.010 Sum_probs=49.3
Q ss_pred CeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcchHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEE
Q 012744 32 LRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSDMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACL 111 (457)
Q Consensus 32 h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~v 111 (457)
.+..+++++.+......+ |++...+- +...+.. ...+.+.++++.+++ .+..+|
T Consensus 197 ~~~~v~~H~af~Yfa~~y---------Gl~~~~~~-~~~~~~e-------------ps~~~l~~l~~~ik~---~~v~~I 250 (313)
T 1toa_A 197 RRVLVTAHDAFGYFSRAY---------GFEVKGLQ-GVSTASE-------------ASAHDMQELAAFIAQ---RKLPAI 250 (313)
T ss_dssp GCEEEEEESCCHHHHHHH---------TCEEEEEE-CSSCSSC-------------CCHHHHHHHHHHHHH---TTCSEE
T ss_pred CCEEEEECCcHHHHHHHC---------CCeEEEee-ccCCCCC-------------CCHHHHHHHHHHHHH---cCCCEE
Confidence 455666778888888888 77766542 1111111 111345555565655 889999
Q ss_pred EecCCcc--hHHHHH-----HHcCCceEE
Q 012744 112 IADGAAG--WAIEVA-----EKMKLRRAV 133 (457)
Q Consensus 112 v~D~~~~--~~~~~A-----~~lgiP~v~ 133 (457)
+++.... .+..++ +..|+|...
T Consensus 251 f~e~~~~~~~~~~la~~~~A~e~gv~v~~ 279 (313)
T 1toa_A 251 FIESSIPHKNVEALRDAVQARGHVVQIGG 279 (313)
T ss_dssp EEETTSCTHHHHHHHHHHHTTTCCCEEEE
T ss_pred EEeCCCChHHHHHHHccchhhhcCCceee
Confidence 9998766 566778 999999754
No 297
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=29.54 E-value=37 Score=30.57 Aligned_cols=33 Identities=15% Similarity=0.178 Sum_probs=26.9
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
.+||.|+-.|..| ..+|..|.++||+|++....
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 4688888777766 47889999999999998754
No 298
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=29.42 E-value=91 Score=27.55 Aligned_cols=80 Identities=6% Similarity=0.001 Sum_probs=46.8
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCcccee
Q 012744 271 VIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCFM 350 (457)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I 350 (457)
.|.++--|-.....+.+..+...|...+..+.+..... +.... ..+. ++....++ +|
T Consensus 12 ~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~---------~~~a~----------~~~~--~~~~~~d~--vv 68 (304)
T 3s40_A 12 LLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKE---------QGDAT----------KYCQ--EFASKVDL--II 68 (304)
T ss_dssp EEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCS---------TTHHH----------HHHH--HHTTTCSE--EE
T ss_pred EEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccC---------cchHH----------HHHH--HhhcCCCE--EE
Confidence 44555443222223556677777877788776655432 11100 0000 11123455 99
Q ss_pred eccCcchhhhhhh------cCCceecccc
Q 012744 351 SHCGWNSTTEGVS------NGVPFLCWPF 373 (457)
Q Consensus 351 ~HgG~~s~~eal~------~GvP~l~~P~ 373 (457)
.-||-||+.|.+. .++|+.++|.
T Consensus 69 ~~GGDGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 69 VFGGDGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp EEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred EEccchHHHHHHHHHhhCCCCCcEEEecC
Confidence 9999999999864 5789999997
No 299
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=29.41 E-value=74 Score=28.38 Aligned_cols=74 Identities=12% Similarity=0.266 Sum_probs=46.4
Q ss_pred cCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhcc-CCCccceeeccCcchhh
Q 012744 281 VLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLT-HPSISCFMSHCGWNSTT 359 (457)
Q Consensus 281 ~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~-~~~~~~~I~HgG~~s~~ 359 (457)
..+.+..+.+.+++.+...+.||...+. -+-.++..+++.+.+-. ++.. ||-+.-.....
T Consensus 63 gtd~~Ra~dL~~a~~Dp~i~aI~~~rGG-----------------yga~rlLp~LD~~~i~~a~PK~--~iGySDiTaL~ 123 (311)
T 1zl0_A 63 GTVEQRLEDLHNAFDMPDITAVWCLRGG-----------------YGCGQLLPGLDWGRLQAASPRP--LIGFSDISVLL 123 (311)
T ss_dssp SCHHHHHHHHHHHHHSTTEEEEEESCCS-----------------SCGGGGTTTCCHHHHHHSCCCC--EEECGGGHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEccCC-----------------cCHHHHhhccchhhhhccCCCE--EEEEchhHHHH
Confidence 3456668888899998888988888765 11122445555444444 5655 77666666666
Q ss_pred hhhh-cCCceecccc
Q 012744 360 EGVS-NGVPFLCWPF 373 (457)
Q Consensus 360 eal~-~GvP~l~~P~ 373 (457)
-+++ .|++.+--|.
T Consensus 124 ~al~~~G~~t~hGp~ 138 (311)
T 1zl0_A 124 SAFHRHGLPAIHGPV 138 (311)
T ss_dssp HHHHHTTCCEEECCC
T ss_pred HHHHHcCCcEEECHh
Confidence 6665 3666655553
No 300
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=29.28 E-value=1e+02 Score=23.64 Aligned_cols=41 Identities=15% Similarity=0.232 Sum_probs=28.5
Q ss_pred CCEEEE-EcCCCCcChHH--HHHHHHHHHhCCCeE-EEEeCCcch
Q 012744 3 SPHVVV-IPNPEQGHVIP--LLELSQNLAKHGLRI-TFVNSEYNH 43 (457)
Q Consensus 3 ~~~vl~-~~~~~~GH~~p--~~~la~~L~~~Gh~V-t~~~~~~~~ 43 (457)
.||++| ++.|-+|+-.. .+.+|.++.+.||+| .++-.....
T Consensus 12 ~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~DGV 56 (140)
T 2d1p_A 12 SMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREGV 56 (140)
T ss_dssp CCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGGGG
T ss_pred ceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEechHH
Confidence 467766 44555566554 567799999999999 777665543
No 301
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=29.01 E-value=50 Score=29.97 Aligned_cols=36 Identities=14% Similarity=0.102 Sum_probs=24.7
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYN 42 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~ 42 (457)
+++|+++ |+.|.+- ..|+++|.++||+|+.++-...
T Consensus 5 ~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~~ 40 (352)
T 1xgk_A 5 KKTIAVV--GATGRQG--ASLIRVAAAVGHHVRAQVHSLK 40 (352)
T ss_dssp CCCEEEE--STTSHHH--HHHHHHHHHTTCCEEEEESCSC
T ss_pred CCEEEEE--CCCCHHH--HHHHHHHHhCCCEEEEEECCCC
Confidence 4555544 5555554 3578899999999999875443
No 302
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=28.97 E-value=56 Score=27.84 Aligned_cols=30 Identities=13% Similarity=0.080 Sum_probs=21.7
Q ss_pred CCeeEEEecCCcc--hHHHHHHHcCCceEEEe
Q 012744 106 EKTACLIADGAAG--WAIEVAEKMKLRRAVVV 135 (457)
Q Consensus 106 ~~~D~vv~D~~~~--~~~~~A~~lgiP~v~~~ 135 (457)
.+||+||...... ....--+..|+|++.+.
T Consensus 58 l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 58 MKPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp TCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred cCCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 6999999987653 23344467799999874
No 303
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=28.95 E-value=44 Score=28.47 Aligned_cols=33 Identities=18% Similarity=0.274 Sum_probs=25.4
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
.++|.|+-.|..| ..+|+.|+++||+|++....
T Consensus 19 ~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 19 GMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred CCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 6788888655554 35789999999999987643
No 304
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=28.95 E-value=18 Score=32.33 Aligned_cols=32 Identities=9% Similarity=0.056 Sum_probs=23.8
Q ss_pred hccCCCccceeeccCcchhhhhhhc----CCceecccc
Q 012744 340 VLTHPSISCFMSHCGWNSTTEGVSN----GVPFLCWPF 373 (457)
Q Consensus 340 ll~~~~~~~~I~HgG~~s~~eal~~----GvP~l~~P~ 373 (457)
....+++ +|.-||-||+.+++.. ++|++.++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 3445677 9999999999999754 889888763
No 305
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=28.92 E-value=21 Score=31.53 Aligned_cols=30 Identities=3% Similarity=-0.048 Sum_probs=24.3
Q ss_pred cCCCccceeeccCcchhhhhhh----cCCceecccc
Q 012744 342 THPSISCFMSHCGWNSTTEGVS----NGVPFLCWPF 373 (457)
Q Consensus 342 ~~~~~~~~I~HgG~~s~~eal~----~GvP~l~~P~ 373 (457)
..+++ +|+=||-||+.+++. .++|.+.++.
T Consensus 62 ~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 62 QQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred cCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 34677 999999999999974 3789888863
No 306
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=28.89 E-value=90 Score=23.62 Aligned_cols=43 Identities=16% Similarity=0.156 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCCCCeeEEEecCCcc--hHHHHHHHc-----CCceEEEechh
Q 012744 93 LEGLIEEIHGREGEKTACLIADGAAG--WAIEVAEKM-----KLRRAVVVITS 138 (457)
Q Consensus 93 ~~~~~~~l~~~~~~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 138 (457)
..+.++.+.. ..||+||.|.... .+..+.+.+ .+|++.++...
T Consensus 40 ~~~a~~~l~~---~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (154)
T 2rjn_A 40 PLDALEALKG---TSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYA 89 (154)
T ss_dssp HHHHHHHHTT---SCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGG
T ss_pred HHHHHHHHhc---CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCC
No 307
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=28.86 E-value=89 Score=22.05 Aligned_cols=32 Identities=9% Similarity=0.121 Sum_probs=23.3
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
.+|++++..+ ......++.|.+.||+|.++..
T Consensus 57 ~~iv~yC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (103)
T 3eme_A 57 EIYYIVCAGG----VRSAKVVEYLEANGIDAVNVEG 88 (103)
T ss_dssp SEEEEECSSS----SHHHHHHHHHHTTTCEEEEETT
T ss_pred CeEEEECCCC----hHHHHHHHHHHHCCCCeEEeCC
Confidence 4678887543 3567788999999998876643
No 308
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=28.76 E-value=61 Score=27.08 Aligned_cols=34 Identities=21% Similarity=0.359 Sum_probs=24.7
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
+|+++++.++.| + =.++|++|+++|++|+++.-.
T Consensus 2 ~k~vlITGas~g-I--G~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRG-I--GEAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 456677766543 2 257899999999999887654
No 309
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=28.69 E-value=45 Score=29.99 Aligned_cols=31 Identities=10% Similarity=0.054 Sum_probs=21.8
Q ss_pred CCeeEEEecCCcchHHHHHHHcCCceEEEec
Q 012744 106 EKTACLIADGAAGWAIEVAEKMKLRRAVVVI 136 (457)
Q Consensus 106 ~~~D~vv~D~~~~~~~~~A~~lgiP~v~~~~ 136 (457)
.+||+||......-...--+..|+|++.+..
T Consensus 115 l~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 115 ATPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp TCCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred cCCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 6999999975433333444677999999754
No 310
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=28.66 E-value=74 Score=26.90 Aligned_cols=36 Identities=14% Similarity=0.304 Sum_probs=26.0
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
|-..|.++++.++.| + =.++|++|+++|++|+++..
T Consensus 1 Ml~~k~~lVTGas~g-I--G~~ia~~l~~~G~~V~~~~~ 36 (246)
T 3osu_A 1 MKMTKSALVTGASRG-I--GRSIALQLAEEGYNVAVNYA 36 (246)
T ss_dssp CCCSCEEEETTCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEeC
Confidence 545567777766542 2 25789999999999988765
No 311
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=28.63 E-value=39 Score=32.08 Aligned_cols=33 Identities=15% Similarity=0.231 Sum_probs=25.7
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
|||.|+-.|..| ..+|..|+++||+|+++....
T Consensus 3 mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVG-----LVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEECCH
Confidence 788888665545 468999999999999886543
No 312
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=28.49 E-value=58 Score=29.31 Aligned_cols=27 Identities=4% Similarity=-0.011 Sum_probs=21.5
Q ss_pred CCHHHHHHHHHHHhhcCCcEEEEEcCC
Q 012744 282 LEQNQFQELALGLEICNRSFLWVVRPD 308 (457)
Q Consensus 282 ~~~~~~~~~~~a~~~~~~~~i~~~~~~ 308 (457)
.+.+....+.+++.+...+.||...+.
T Consensus 62 td~~Ra~dL~~a~~Dp~i~aI~~~rGG 88 (327)
T 4h1h_A 62 SIRSRVADIHEAFNDSSVKAILTVIGG 88 (327)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCc
Confidence 355668889999999999999988654
No 313
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=28.41 E-value=60 Score=28.18 Aligned_cols=32 Identities=25% Similarity=0.227 Sum_probs=26.6
Q ss_pred CCeeEEEecCCcc------hHHHHHHHcCCceEEEech
Q 012744 106 EKTACLIADGAAG------WAIEVAEKMKLRRAVVVIT 137 (457)
Q Consensus 106 ~~~D~vv~D~~~~------~~~~~A~~lgiP~v~~~~~ 137 (457)
.+||+|++-.... .+..+|..||+|++.....
T Consensus 111 ~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 148 (264)
T 1o97_C 111 EAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVAD 148 (264)
T ss_dssp HCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred cCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEE
Confidence 5799999987653 8899999999999987543
No 314
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=28.37 E-value=37 Score=26.13 Aligned_cols=36 Identities=8% Similarity=0.127 Sum_probs=28.2
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYN 42 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~ 42 (457)
.+++++..|+. +.|++.+++.|.++|.+|+++ ....
T Consensus 19 ~~~llIaGG~G--iaPl~sm~~~l~~~~~~v~l~-g~R~ 54 (142)
T 3lyu_A 19 GKILAIGAYTG--IVEVYPIAKAWQEIGNDVTTL-HVTF 54 (142)
T ss_dssp SEEEEEEETTH--HHHHHHHHHHHHHTTCEEEEE-EEEE
T ss_pred CeEEEEECcCc--HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 46677665553 789999999999999999998 5443
No 315
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=28.32 E-value=1.1e+02 Score=26.09 Aligned_cols=38 Identities=11% Similarity=0.151 Sum_probs=27.3
Q ss_pred CEEEEEcCCCC----------cC-hHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 4 PHVVVIPNPEQ----------GH-VIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 4 ~~vl~~~~~~~----------GH-~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
+||+++..... |- ..=++.-...|.++|++|+++++..
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g 58 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETG 58 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 47887766532 22 3447777889999999999999743
No 316
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=28.32 E-value=62 Score=28.38 Aligned_cols=34 Identities=24% Similarity=0.272 Sum_probs=24.9
Q ss_pred CC-CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 1 MS-SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 1 m~-~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
|. ++||.|+-.|..|. .+|+.|.+.||+|+++..
T Consensus 1 M~~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 1 MEKSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp ---CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 44 57999997766664 468889899999987654
No 317
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=28.23 E-value=93 Score=26.16 Aligned_cols=30 Identities=17% Similarity=0.143 Sum_probs=22.3
Q ss_pred CCeeEEEecCCcc-------hHHHHHHHcCCceEEEe
Q 012744 106 EKTACLIADGAAG-------WAIEVAEKMKLRRAVVV 135 (457)
Q Consensus 106 ~~~D~vv~D~~~~-------~~~~~A~~lgiP~v~~~ 135 (457)
.+||+|++|.... .|..+.-.+++|.|.+-
T Consensus 102 ~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVA 138 (225)
T 2w36_A 102 TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVA 138 (225)
T ss_dssp SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEE
Confidence 5799999998654 24445666689999973
No 318
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=28.16 E-value=60 Score=28.43 Aligned_cols=36 Identities=14% Similarity=0.395 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
+.|+++++.++.| + =.++|++|+++|++|+++.-..
T Consensus 11 ~~k~vlITGas~G-I--G~~~a~~L~~~G~~V~~~~r~~ 46 (311)
T 3o26_A 11 KRRCAVVTGGNKG-I--GFEICKQLSSNGIMVVLTCRDV 46 (311)
T ss_dssp -CCEEEESSCSSH-H--HHHHHHHHHHTTCEEEEEESCH
T ss_pred CCcEEEEecCCch-H--HHHHHHHHHHCCCEEEEEeCCH
Confidence 4467778776653 2 2478999999999999887543
No 319
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=28.15 E-value=35 Score=31.55 Aligned_cols=41 Identities=10% Similarity=0.095 Sum_probs=30.2
Q ss_pred CCCCEEEEEcCCCCcC----hHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 1 MSSPHVVVIPNPEQGH----VIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH----~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
|+|+||+++..|..+- +.....++++|.+.||+|+.+....
T Consensus 35 m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~~ 79 (383)
T 3k3p_A 35 MSKETLVLLYGGRSAERDVSVLSAESVMRAINYDNFLVKTYFITQ 79 (383)
T ss_dssp --CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEECT
T ss_pred ccCCeEEEEeCCCCCcchHHHHHHHHHHHHhhhcCCEEEEEEecC
Confidence 7888998888764433 3467788899999999999988653
No 320
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=28.12 E-value=94 Score=24.52 Aligned_cols=28 Identities=21% Similarity=0.298 Sum_probs=23.6
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHhhcC
Q 012744 271 VIYVAFGSHTVLEQNQFQELALGLEICN 298 (457)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~ 298 (457)
.+|+++||....+.+.+...++.+...+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 5899999987778888888888887764
No 321
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=28.11 E-value=25 Score=32.61 Aligned_cols=58 Identities=19% Similarity=0.247 Sum_probs=37.6
Q ss_pred hhhccCCCccceeeccCcchhhhhhhc----CC-ceeccccccchhhhHHhhhhhhceeEEeeccCCCccCHHHHHHHHH
Q 012744 338 QKVLTHPSISCFMSHCGWNSTTEGVSN----GV-PFLCWPFFADQFMNTTYICDVWKVGLRLERNQSGIIGREEIKNKVD 412 (457)
Q Consensus 338 ~~ll~~~~~~~~I~HgG~~s~~eal~~----Gv-P~l~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~ 412 (457)
.++-..+++ +|+=||-||+..++.. ++ |++.+... . +|.= - .+..+++.+++.
T Consensus 109 ~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G-----------~-lGFL--t------~~~~~~~~~al~ 166 (388)
T 3afo_A 109 QDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFALG-----------T-LGFL--S------PFDFKEHKKVFQ 166 (388)
T ss_dssp HHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEECS-----------S-CCSS--C------CEEGGGHHHHHH
T ss_pred hhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEECC-----------C-cccC--C------cCChHHHHHHHH
Confidence 344455777 9999999999999643 67 78877431 1 2211 1 134567777777
Q ss_pred HHhCC
Q 012744 413 QVLGD 417 (457)
Q Consensus 413 ~~l~~ 417 (457)
+++++
T Consensus 167 ~il~g 171 (388)
T 3afo_A 167 EVISS 171 (388)
T ss_dssp HHHTT
T ss_pred HHhcC
Confidence 77754
No 322
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=28.05 E-value=52 Score=28.07 Aligned_cols=39 Identities=10% Similarity=0.163 Sum_probs=25.7
Q ss_pred CEEEEEcCCCCcCh--HHHHHHHHHHHhCCCeEEEEeCCcc
Q 012744 4 PHVVVIPNPEQGHV--IPLLELSQNLAKHGLRITFVNSEYN 42 (457)
Q Consensus 4 ~~vl~~~~~~~GH~--~p~~~la~~L~~~Gh~Vt~~~~~~~ 42 (457)
.-++++..|+.+|- ..+..+|+.|+++|+.|..+-.+..
T Consensus 56 ~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~ 96 (259)
T 4ao6_A 56 DRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGH 96 (259)
T ss_dssp SEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC-
T ss_pred CCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCC
Confidence 45777888877774 3578899999999999988876554
No 323
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=28.04 E-value=40 Score=30.58 Aligned_cols=37 Identities=19% Similarity=0.186 Sum_probs=24.8
Q ss_pred HHHHHHHHHhcCCCCCeeEEEecCCcc-hHHHHHHHcCCceEEEe
Q 012744 92 KLEGLIEEIHGREGEKTACLIADGAAG-WAIEVAEKMKLRRAVVV 135 (457)
Q Consensus 92 ~~~~~~~~l~~~~~~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~ 135 (457)
.++.++.. +||+||...... ....+.+.+|||++.+.
T Consensus 88 n~E~Ilal-------~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 88 DLESLITL-------QPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp CHHHHHHH-------CCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred CHHHHhcC-------CCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 45555544 899999875432 23345577899999874
No 324
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=27.91 E-value=22 Score=30.70 Aligned_cols=34 Identities=12% Similarity=0.204 Sum_probs=26.5
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCC----CeEEEEeC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHG----LRITFVNS 39 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~G----h~Vt~~~~ 39 (457)
|+++||.|+-.|..|. .+|..|.++| |+|++...
T Consensus 2 m~~m~i~iiG~G~mG~-----~~a~~l~~~g~~~~~~v~~~~~ 39 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGS-----ALAHGIANANIIKKENLFYYGP 39 (262)
T ss_dssp CSSSCEEEECCSHHHH-----HHHHHHHHHTSSCGGGEEEECS
T ss_pred CCCCEEEEECcCHHHH-----HHHHHHHHCCCCCCCeEEEEeC
Confidence 7788999997766664 3678888899 89988754
No 325
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=27.89 E-value=66 Score=27.12 Aligned_cols=36 Identities=17% Similarity=0.338 Sum_probs=25.1
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
+.|+++++.++.| +- .++|++|+++|++|+++....
T Consensus 4 ~~k~vlITGas~g-IG--~~~a~~l~~~G~~v~~~~r~~ 39 (247)
T 3lyl_A 4 NEKVALVTGASRG-IG--FEVAHALASKGATVVGTATSQ 39 (247)
T ss_dssp TTCEEEESSCSSH-HH--HHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCCCh-HH--HHHHHHHHHCCCEEEEEeCCH
Confidence 3456666665542 22 578999999999998887543
No 326
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=27.84 E-value=78 Score=27.10 Aligned_cols=33 Identities=15% Similarity=0.308 Sum_probs=23.3
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
+.++++.++. -+ =.+++++|+++||+|+++.-.
T Consensus 8 k~vlVTGas~-gI--G~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 8 KVALVTGAAQ-GI--GRAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp CEEEEETTTS-HH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCC-cH--HHHHHHHHHHCCCEEEEEECC
Confidence 5666665544 22 246899999999999987643
No 327
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=27.83 E-value=46 Score=27.46 Aligned_cols=28 Identities=11% Similarity=0.101 Sum_probs=21.2
Q ss_pred CCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 12 PEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 12 ~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
|+.|.+- ..|+++|.++||+|+.++-..
T Consensus 7 GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 7 GATGRAG--SAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp TTTSHHH--HHHHHHHHHTTCEEEEEESCH
T ss_pred cCCCHHH--HHHHHHHHHCCCEEEEEEecc
Confidence 4555554 578899999999999987543
No 328
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=27.81 E-value=3e+02 Score=23.86 Aligned_cols=86 Identities=8% Similarity=-0.028 Sum_probs=47.9
Q ss_pred CCCccceeeccCcchhhhhh-----hc---CCceeccccccchhhhHH-----hhhhhhc-eeEEeeccCCCccCHHHHH
Q 012744 343 HPSISCFMSHCGWNSTTEGV-----SN---GVPFLCWPFFADQFMNTT-----YICDVWK-VGLRLERNQSGIIGREEIK 408 (457)
Q Consensus 343 ~~~~~~~I~HgG~~s~~eal-----~~---GvP~l~~P~~~DQ~~na~-----~v~~~lG-~g~~l~~~~~~~~~~~~l~ 408 (457)
.+++ +|.--|...+.+.+ .. |+|+-++ |.+..+. .+.+. + +-+.+...+....-+..|+
T Consensus 106 ~adl--Viaat~d~~~n~~I~~~Ar~~f~~~i~VNvv----d~pel~~f~~Pa~~~~g-~~l~IaIST~Gksp~lA~~ir 178 (274)
T 1kyq_A 106 AWYI--IMTCIPDHPESARIYHLCKERFGKQQLVNVA----DKPDLCDFYFGANLEIG-DRLQILISTNGLSPRFGALVR 178 (274)
T ss_dssp CEEE--EEECCSCHHHHHHHHHHHHHHHCTTSEEEET----TCGGGBSEECCEEEEET-TTEEEEEEESSSCHHHHHHHH
T ss_pred CeEE--EEEcCCChHHHHHHHHHHHHhcCCCcEEEEC----CCcccCeeEeeeEEEeC-CCEEEEEECCCCCcHHHHHHH
Confidence 4555 77777755444433 22 6665222 3333332 22332 3 3333433223344568899
Q ss_pred HHHHHHh---CC---HHHHHHHHHHHHHHHhhh
Q 012744 409 NKVDQVL---GD---QNFKARALKLKEKALSSV 435 (457)
Q Consensus 409 ~~i~~~l---~~---~~~~~~a~~l~~~~~~~~ 435 (457)
+.|..++ .+ ..+-+.+.++++++++..
T Consensus 179 ~~ie~~l~~~p~~~~~~~~~~l~~~R~~ik~~~ 211 (274)
T 1kyq_A 179 DEIRNLFTQMGDLALEDAVVKLGELRRGIRLLA 211 (274)
T ss_dssp HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhC
Confidence 9999999 53 267778888888888653
No 329
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=27.74 E-value=62 Score=26.61 Aligned_cols=37 Identities=14% Similarity=0.090 Sum_probs=28.9
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
.+.+++..|..|+..-+..+++.|.++|+.|..+-.+
T Consensus 22 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 58 (251)
T 3dkr_A 22 DTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFS 58 (251)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCT
T ss_pred CceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCCC
Confidence 3556677777788888899999999999998776543
No 330
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=27.69 E-value=1.5e+02 Score=27.86 Aligned_cols=32 Identities=16% Similarity=0.223 Sum_probs=23.1
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
||+++. .| .....+++++.+.|++|+++.+..
T Consensus 3 ~ilI~g---~g--~~~~~i~~a~~~~G~~vv~v~~~~ 34 (451)
T 2vpq_A 3 KVLIAN---RG--EIAVRIIRACRDLGIQTVAIYSEG 34 (451)
T ss_dssp EEEECC---CH--HHHHHHHHHHHHTTCEEEEEEEGG
T ss_pred eEEEeC---CC--HHHHHHHHHHHHcCCEEEEEeccc
Confidence 566553 22 246689999999999999987543
No 331
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=27.65 E-value=1.3e+02 Score=22.99 Aligned_cols=88 Identities=9% Similarity=0.072 Sum_probs=56.4
Q ss_pred ChHHHHHHHHHHHhC--CCeEEEEeCCcchhHHHh-hhcCCCCCCCCeEEEecCCCCCCCCCcchHHHHHHHHHHhcchH
Q 012744 16 HVIPLLELSQNLAKH--GLRITFVNSEYNHKRVLE-SLEGKNYIGEQIHLVSIPDGMEPWDDRSDMRKLLEKRLQVMPGK 92 (457)
Q Consensus 16 H~~p~~~la~~L~~~--Gh~Vt~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (457)
+=.-++.+|+.|.+. ||++. .+......+.+ . |+....+..+-. ..++.
T Consensus 14 dK~~~v~~a~~~~~ll~Gf~l~--AT~gTa~~L~e~~---------Gl~v~~v~k~~~-----------------eG~p~ 65 (134)
T 2xw6_A 14 KKEEMVAFCQRHREVLARFPLV--ATGTTGRRIEEAT---------GLTVEKLLSGPL-----------------GGDQQ 65 (134)
T ss_dssp GHHHHHHHHHHTHHHHTTSCEE--ECHHHHHHHHHHH---------CCCCEECSCGGG-----------------THHHH
T ss_pred cHHHHHHHHHHHHHHhCCCEEE--EccHHHHHHHHhh---------CceEEEEEecCC-----------------CCcch
Confidence 345688999999998 99654 56677777777 5 665555432110 01234
Q ss_pred HHHHHHHHhcCCCCCeeEEEecCC--c--------chHHHHHHHcCCceEEEech
Q 012744 93 LEGLIEEIHGREGEKTACLIADGA--A--------GWAIEVAEKMKLRRAVVVIT 137 (457)
Q Consensus 93 ~~~~~~~l~~~~~~~~D~vv~D~~--~--------~~~~~~A~~lgiP~v~~~~~ 137 (457)
+-+++.. .+.|+||.-.. . ..-..+|-..+||++.-..+
T Consensus 66 I~d~I~~------geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~lat 114 (134)
T 2xw6_A 66 MGARVAE------GRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLATNPMA 114 (134)
T ss_dssp HHHHHHT------TCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEECSHHH
T ss_pred HHHHHHC------CCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEcCHHH
Confidence 4444444 89999998543 1 13567888999999985443
No 332
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=27.63 E-value=76 Score=26.54 Aligned_cols=37 Identities=14% Similarity=0.151 Sum_probs=28.3
Q ss_pred EEEEEcCCCCcC--hHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 5 HVVVIPNPEQGH--VIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 5 ~vl~~~~~~~GH--~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
..+++..|..|+ ..-+..+++.|.++|++|..+-.+.
T Consensus 28 p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G 66 (251)
T 2wtm_A 28 PLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYG 66 (251)
T ss_dssp EEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred CEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCCC
Confidence 456666777777 6677889999999999998765543
No 333
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=27.63 E-value=1.1e+02 Score=25.75 Aligned_cols=36 Identities=14% Similarity=0.283 Sum_probs=26.4
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
+.|+++++.++.| + =.++|++|+++|++|+++....
T Consensus 6 ~~k~vlITGas~g-I--G~~~a~~l~~~G~~v~~~~~~~ 41 (255)
T 3icc_A 6 KGKVALVTGASRG-I--GRAIAKRLANDGALVAIHYGNR 41 (255)
T ss_dssp TTCEEEETTCSSH-H--HHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEECCCCh-H--HHHHHHHHHHCCCeEEEEeCCc
Confidence 4567778777654 2 3578999999999999875433
No 334
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=27.60 E-value=27 Score=31.99 Aligned_cols=33 Identities=18% Similarity=0.128 Sum_probs=26.2
Q ss_pred CC-EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 3 SP-HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 3 ~~-~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
+| ||.|+-.|..| ..+|..|+++||+|+++...
T Consensus 14 ~M~kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 14 YLNKAVVFGSGAFG-----TALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp CEEEEEEECCSHHH-----HHHHHHHTTTEEEEEEECSC
T ss_pred ccCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 35 88888777666 35789999999999998654
No 335
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=27.56 E-value=1.2e+02 Score=24.49 Aligned_cols=40 Identities=15% Similarity=0.181 Sum_probs=29.0
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
|..+||+|+.+++.. ..-+....+.|.+.|++|++++...
T Consensus 1 mm~~~v~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 40 (197)
T 2rk3_A 1 MASKRALVILAKGAE-EMETVIPVDVMRRAGIKVTVAGLAG 40 (197)
T ss_dssp -CCCEEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEETTC
T ss_pred CCCCEEEEEECCCCc-HHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 566788888876553 3445667788889999999998643
No 336
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=27.54 E-value=64 Score=29.03 Aligned_cols=81 Identities=11% Similarity=-0.021 Sum_probs=0.0
Q ss_pred CCeEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCcc
Q 012744 268 ANSVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSIS 347 (457)
Q Consensus 268 ~~~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~ 347 (457)
.+-.|+++-.|-.. +.+..+.+.+...+..+.+..... .+ -..-+-...+...+++
T Consensus 30 ~~~~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~----------~~----------~~~~~~~~~~~~~~d~- 85 (332)
T 2bon_A 30 PASLLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWE----------KG----------DAARYVEEARKFGVAT- 85 (332)
T ss_dssp CCEEEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCS----------TT----------HHHHHHHHHHHHTCSE-
T ss_pred ceEEEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecC----------cc----------hHHHHHHHHHhcCCCE-
Q ss_pred ceeeccCcchhhhhh--------hcCCceecccc
Q 012744 348 CFMSHCGWNSTTEGV--------SNGVPFLCWPF 373 (457)
Q Consensus 348 ~~I~HgG~~s~~eal--------~~GvP~l~~P~ 373 (457)
+|.-||-||+.|++ ..++|+.++|.
T Consensus 86 -vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~ 118 (332)
T 2bon_A 86 -VIAGGGDGTINEVSTALIQCEGDDIPALGILPL 118 (332)
T ss_dssp -EEEEESHHHHHHHHHHHHHCCSSCCCEEEEEEC
T ss_pred -EEEEccchHHHHHHHHHhhcccCCCCeEEEecC
No 337
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=27.45 E-value=60 Score=29.35 Aligned_cols=72 Identities=15% Similarity=0.186 Sum_probs=42.0
Q ss_pred CHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccceeeccCcchhhhhh
Q 012744 283 EQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCFMSHCGWNSTTEGV 362 (457)
Q Consensus 283 ~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~I~HgG~~s~~eal 362 (457)
+.+....+.+++.+...+.||...+. -+-.++..+++...+-.++.. ||-+.-....+-++
T Consensus 64 d~~Ra~dL~~a~~Dp~i~aI~~~rGG-----------------~g~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~al 124 (336)
T 3sr3_A 64 IQERAKELNALIRNPNVSCIMSTIGG-----------------MNSNSLLPYIDYDAFQNNPKI--MIGYSDATALLLGI 124 (336)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCC-----------------SCGGGGGGGSCHHHHHHSCCE--EEECGGGHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcccc-----------------ccHHHHhhhcChhHHhhCCeE--EEEechHHHHHHHH
Confidence 45667888888888888888887654 011223444444444444544 55555555555555
Q ss_pred h--cCCceecccc
Q 012744 363 S--NGVPFLCWPF 373 (457)
Q Consensus 363 ~--~GvP~l~~P~ 373 (457)
+ .|+..+--|.
T Consensus 125 ~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 125 YAKTGIPTFYGPA 137 (336)
T ss_dssp HHHHCCCEEECCC
T ss_pred HHhcCceEEECCh
Confidence 4 3555544443
No 338
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=27.27 E-value=60 Score=26.43 Aligned_cols=57 Identities=16% Similarity=0.194 Sum_probs=39.1
Q ss_pred hceeEEeeccCCCccCHHHHHHHHHHHhCC-H------HHHHHHHHHHHHHHh----hhhcCCChHHHHHHHHHHHh
Q 012744 388 WKVGLRLERNQSGIIGREEIKNKVDQVLGD-Q------NFKARALKLKEKALS----SVREGGSSNKAIQNFVQSIK 453 (457)
Q Consensus 388 lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~-~------~~~~~a~~l~~~~~~----~~~~~g~~~~~~~~~~~~~~ 453 (457)
-|+|+.+ |+++|.++|...+++ . .|+ +.-.+-..+++ -|.++......+|.-+-.+.
T Consensus 111 cGVGV~V--------T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~vD~~~l~lL 178 (187)
T 3tl4_X 111 SGVGIEI--------TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPIIDQEVLKLL 178 (187)
T ss_dssp TTTTCCC--------CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHHHHHHHHHHH
T ss_pred CCCCeEe--------CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHc
Confidence 5888775 899999999999953 2 355 55555555553 35566777777776555554
No 339
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=27.21 E-value=96 Score=23.34 Aligned_cols=44 Identities=20% Similarity=0.132 Sum_probs=28.8
Q ss_pred HHHHHHHHHhcCCCCCeeEEEecCCcc--hHHHHHHHc-----CCceEEEechh
Q 012744 92 KLEGLIEEIHGREGEKTACLIADGAAG--WAIEVAEKM-----KLRRAVVVITS 138 (457)
Q Consensus 92 ~~~~~~~~l~~~~~~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 138 (457)
...+.++.+.. .+||+||.|.... .+..+.+.+ ++|++.++...
T Consensus 54 ~~~~al~~l~~---~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 104 (150)
T 4e7p_A 54 NGQEAIQLLEK---ESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFK 104 (150)
T ss_dssp SHHHHHHHHTT---SCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred CHHHHHHHhhc---cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCC
Confidence 35566666665 7899999997654 344444332 58888876654
No 340
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=27.16 E-value=1.1e+02 Score=25.96 Aligned_cols=34 Identities=21% Similarity=0.321 Sum_probs=21.9
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCe-EEEEeCCc
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLR-ITFVNSEY 41 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~-Vt~~~~~~ 41 (457)
+.++++.+ .|-+ =.++|++|+++|++ |+++.-..
T Consensus 6 k~vlVtGa-s~gI--G~~~a~~l~~~G~~~v~~~~r~~ 40 (254)
T 1sby_A 6 KNVIFVAA-LGGI--GLDTSRELVKRNLKNFVILDRVE 40 (254)
T ss_dssp CEEEEETT-TSHH--HHHHHHHHHHTCCSEEEEEESSC
T ss_pred cEEEEECC-CChH--HHHHHHHHHHCCCcEEEEEecCc
Confidence 34455543 3433 35789999999997 77766543
No 341
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=27.07 E-value=56 Score=28.75 Aligned_cols=34 Identities=15% Similarity=0.293 Sum_probs=23.6
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
+++|+++ |+.|.+-. .|+++|.++||+|+.++-.
T Consensus 7 ~~~vlVt--GatG~iG~--~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 7 KHRILIT--GGAGFIGG--HLARALVASGEEVTVLDDL 40 (321)
T ss_dssp CCEEEEE--TTTSHHHH--HHHHHHHHTTCCEEEECCC
T ss_pred CCeEEEE--CCCChHHH--HHHHHHHHCCCEEEEEecC
Confidence 4555544 45555443 6789999999999998753
No 342
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=27.06 E-value=2.1e+02 Score=25.45 Aligned_cols=76 Identities=12% Similarity=0.096 Sum_probs=50.7
Q ss_pred CeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcchHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEE
Q 012744 32 LRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSDMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACL 111 (457)
Q Consensus 32 h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~v 111 (457)
.+..+++++.+..+...+ |++...+. +...+. ......+.++++.+++ .+..+|
T Consensus 204 ~r~~v~~H~af~Yfa~~y---------GL~~~~~~-~~~~~~-------------eps~~~l~~l~~~ik~---~~v~~I 257 (321)
T 1xvl_A 204 QRFLVSCEGAFSYLARDY---------GMEEIYMW-PINAEQ-------------QFTPKQVQTVIEEVKT---NNVPTI 257 (321)
T ss_dssp GCEEEEEESTTHHHHHHT---------TCEEEEEE-SSSSSC-------------SCCHHHHHHHHHHHHT---TTCSEE
T ss_pred CCEEEEECchHHHHHHHC---------CCeEEEee-ccCCCC-------------CCCHHHHHHHHHHHHH---cCCcEE
Confidence 345666788888888888 77766542 111111 1112345566666666 889999
Q ss_pred EecCCcc--hHHHHHHHcCCceEE
Q 012744 112 IADGAAG--WAIEVAEKMKLRRAV 133 (457)
Q Consensus 112 v~D~~~~--~~~~~A~~lgiP~v~ 133 (457)
+++.... .+..+|+..|++.+.
T Consensus 258 f~e~~~~~~~~~~iA~e~g~~v~~ 281 (321)
T 1xvl_A 258 FCESTVSDKGQKQVAQATGARFGG 281 (321)
T ss_dssp EEETTSCSHHHHHHHTTTCCEEEE
T ss_pred EEeCCCChHHHHHHHHhcCCceee
Confidence 9998766 667889999999864
No 343
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=27.02 E-value=1e+02 Score=22.42 Aligned_cols=32 Identities=13% Similarity=0.006 Sum_probs=20.6
Q ss_pred CCeeEEEecCCcc--hHHHHHHH-------cCCceEEEech
Q 012744 106 EKTACLIADGAAG--WAIEVAEK-------MKLRRAVVVIT 137 (457)
Q Consensus 106 ~~~D~vv~D~~~~--~~~~~A~~-------lgiP~v~~~~~ 137 (457)
.+||+||.|.... .+..+.+. -++|++.++..
T Consensus 46 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~ 86 (133)
T 3nhm_A 46 HPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGY 86 (133)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCC
Confidence 7899999997654 33333322 26788887654
No 344
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=26.96 E-value=56 Score=29.12 Aligned_cols=33 Identities=12% Similarity=0.225 Sum_probs=23.5
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
+++|+++ |+.|.+- ..|+++|.++||+|+.+.-
T Consensus 20 ~~~vlVT--GasG~iG--~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 20 HMRILIT--GGAGCLG--SNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp CCEEEEE--TTTSHHH--HHHHHHHGGGTCEEEEEEC
T ss_pred CCEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 5665544 4445444 4678999999999999875
No 345
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=26.94 E-value=76 Score=25.03 Aligned_cols=28 Identities=25% Similarity=0.232 Sum_probs=22.3
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHhhcC
Q 012744 271 VIYVAFGSHTVLEQNQFQELALGLEICN 298 (457)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~ 298 (457)
.+|+++||....+...+...++++...+
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 5899999987666777888888887754
No 346
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=26.83 E-value=52 Score=27.62 Aligned_cols=36 Identities=17% Similarity=0.182 Sum_probs=23.5
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|+. +.++++.++. -+ =.+++++|+++||+|+++.-.
T Consensus 1 m~~-k~vlITGas~-gI--G~~~a~~l~~~G~~V~~~~r~ 36 (236)
T 1ooe_A 1 MSS-GKVIVYGGKG-AL--GSAILEFFKKNGYTVLNIDLS 36 (236)
T ss_dssp -CC-EEEEEETTTS-HH--HHHHHHHHHHTTEEEEEEESS
T ss_pred CCC-CEEEEECCCc-HH--HHHHHHHHHHCCCEEEEEecC
Confidence 444 4455554443 22 257899999999999988653
No 347
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=26.79 E-value=47 Score=28.40 Aligned_cols=31 Identities=3% Similarity=-0.020 Sum_probs=21.1
Q ss_pred CCeeEEEecCCcc-hHHHHHHHcCCceEEEec
Q 012744 106 EKTACLIADGAAG-WAIEVAEKMKLRRAVVVI 136 (457)
Q Consensus 106 ~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~ 136 (457)
.+||+||...... .....-+..|||++.+..
T Consensus 59 l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~ 90 (260)
T 2q8p_A 59 LKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDF 90 (260)
T ss_dssp TCCSEEEEEGGGHHHHHHHHHHHTSCCEEECC
T ss_pred cCCCEEEecCccCHHHHHHHHHcCCcEEEecC
Confidence 5899999864332 233445677999988753
No 348
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=26.59 E-value=3.1e+02 Score=24.34 Aligned_cols=108 Identities=13% Similarity=0.087 Sum_probs=53.9
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHhhc-CCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccce
Q 012744 271 VIYVAFGSHTVLEQNQFQELALGLEIC-NRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCF 349 (457)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ 349 (457)
+.+|..|.++. ..+.++... +..++.+...+ ...-+.+.++. ++ .-+-...+++..++++++
T Consensus 7 vgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~------~~~~~~~a~~~--g~--~~~~~~~~~l~~~~~D~V 69 (344)
T 3euw_A 7 IALFGAGRIGH-------VHAANIAANPDLELVVIADPF------IEGAQRLAEAN--GA--EAVASPDEVFARDDIDGI 69 (344)
T ss_dssp EEEECCSHHHH-------HHHHHHHHCTTEEEEEEECSS------HHHHHHHHHTT--TC--EEESSHHHHTTCSCCCEE
T ss_pred EEEECCcHHHH-------HHHHHHHhCCCcEEEEEECCC------HHHHHHHHHHc--CC--ceeCCHHHHhcCCCCCEE
Confidence 67788886542 344555444 55666555433 00001111111 12 234456678875555546
Q ss_pred eeccCcc----hhhhhhhcCCceec-ccccc--chhhhHHhhhhhhceeEEee
Q 012744 350 MSHCGWN----STTEGVSNGVPFLC-WPFFA--DQFMNTTYICDVWKVGLRLE 395 (457)
Q Consensus 350 I~HgG~~----s~~eal~~GvP~l~-~P~~~--DQ~~na~~v~~~lG~g~~l~ 395 (457)
+----.. .+.+++.+|+++++ -|+.. ++-.-.....++.|+-+.+.
T Consensus 70 ~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~ 122 (344)
T 3euw_A 70 VIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLG 122 (344)
T ss_dssp EECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEEC
T ss_pred EEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEec
Confidence 6443333 46778999999876 36543 33322222222236555553
No 349
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=26.44 E-value=83 Score=26.38 Aligned_cols=37 Identities=11% Similarity=0.073 Sum_probs=27.8
Q ss_pred EEEEEcCCCCcC--hHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 5 HVVVIPNPEQGH--VIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 5 ~vl~~~~~~~GH--~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
.++++..|..|+ ...+..+++.|.++|+.|..+-.+.
T Consensus 47 p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G 85 (270)
T 3pfb_A 47 DMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNG 85 (270)
T ss_dssp EEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred CEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEcccc
Confidence 455666666655 6668899999999999998876543
No 350
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=26.42 E-value=76 Score=27.38 Aligned_cols=34 Identities=9% Similarity=0.046 Sum_probs=26.6
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
+-|+++++.++.| + =.++|++|+++|++|.+..-
T Consensus 10 ~GK~alVTGas~G-I--G~aia~~la~~Ga~V~~~~r 43 (261)
T 4h15_A 10 RGKRALITAGTKG-A--GAATVSLFLELGAQVLTTAR 43 (261)
T ss_dssp TTCEEEESCCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeccCcH-H--HHHHHHHHHHcCCEEEEEEC
Confidence 4478899888774 2 26789999999999988764
No 351
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=26.41 E-value=77 Score=23.93 Aligned_cols=28 Identities=7% Similarity=0.064 Sum_probs=16.1
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHH
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLA 28 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~ 28 (457)
|.+++|+|++.+=..-=--.-+|++.+.
T Consensus 1 M~~~~VLFVC~gN~cRSpmAEa~~~~~~ 28 (131)
T 1jf8_A 1 MDKKTIYFISTGNSARSQMAEGWGKEIL 28 (131)
T ss_dssp -CCEEEEEEESSSSSHHHHHHHHHHHHS
T ss_pred CCCCEEEEEcCCcchHHHHHHHHHHHhc
Confidence 7778899999874432222334555554
No 352
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=26.29 E-value=38 Score=25.53 Aligned_cols=32 Identities=19% Similarity=0.213 Sum_probs=22.6
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
.+++++-. |.+- ..+++.|.+.|++|+++...
T Consensus 7 ~~v~I~G~---G~iG--~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGL---GRFG--GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECC---SHHH--HHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECC---CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 35766654 4443 45789999999999988653
No 353
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=26.28 E-value=54 Score=27.13 Aligned_cols=32 Identities=16% Similarity=0.342 Sum_probs=24.0
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
.++|.|+-.|..| ..+|..|.++||+|+++..
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 4678887655555 5678899999999998754
No 354
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=26.27 E-value=71 Score=27.85 Aligned_cols=41 Identities=20% Similarity=0.349 Sum_probs=29.5
Q ss_pred CCCCEEEEEcC--CCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 1 MSSPHVVVIPN--PEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 1 m~~~~vl~~~~--~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
|.-++++.+.. |+.|=-.-...||..|+++|++|.++-...
T Consensus 1 M~M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 1 MAETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp ---CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 44344555443 466888889999999999999999987554
No 355
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=26.22 E-value=37 Score=30.09 Aligned_cols=32 Identities=16% Similarity=0.099 Sum_probs=25.6
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
++||.|+-.|..|. .+|+.|+++||+|++...
T Consensus 7 ~~~I~iIG~G~mG~-----~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 7 DFHVGIVGLGSMGM-----GAARSCLRAGLSTWGADL 38 (303)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECCCHHHH-----HHHHHHHHCCCeEEEEEC
Confidence 57899997666563 678999999999998854
No 356
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=26.22 E-value=2.2e+02 Score=26.57 Aligned_cols=32 Identities=16% Similarity=0.214 Sum_probs=23.1
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
||+++.. | .-...+++++++.|++|+++.+..
T Consensus 4 ~ilI~g~---g--~~~~~~~~a~~~~G~~vv~v~~~~ 35 (451)
T 1ulz_A 4 KVLVANR---G--EIAVRIIRACKELGIPTVAIYNEV 35 (451)
T ss_dssp SEEECCC---H--HHHHHHHHHHHHHTCCEEEEECGG
T ss_pred eEEEECC---c--HHHHHHHHHHHHcCCeEEEEechh
Confidence 4666642 2 235679999999999999887533
No 357
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=26.12 E-value=1e+02 Score=22.84 Aligned_cols=42 Identities=12% Similarity=0.096 Sum_probs=25.9
Q ss_pred HHHHHHHHhcCCCCCeeEEEecCCcc--hHHHHHHHc-----CCceEEEechh
Q 012744 93 LEGLIEEIHGREGEKTACLIADGAAG--WAIEVAEKM-----KLRRAVVVITS 138 (457)
Q Consensus 93 ~~~~~~~l~~~~~~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 138 (457)
..+.++.+.. .+||+||.|. .. .+..+.+.+ ++|++.++...
T Consensus 37 ~~~a~~~l~~---~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (142)
T 2qxy_A 37 EQEAFTFLRR---EKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAYV 85 (142)
T ss_dssp HHHHHHHHTT---SCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESCC
T ss_pred HHHHHHHHhc---cCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECCC
Confidence 3444555554 7899999997 44 333333332 58888876654
No 358
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=26.11 E-value=59 Score=29.01 Aligned_cols=31 Identities=10% Similarity=0.089 Sum_probs=21.4
Q ss_pred CCeeEEEecCCcc-hHHHHHHHcCCceEEEec
Q 012744 106 EKTACLIADGAAG-WAIEVAEKMKLRRAVVVI 136 (457)
Q Consensus 106 ~~~D~vv~D~~~~-~~~~~A~~lgiP~v~~~~ 136 (457)
.+||+||...... ....--++.|||++.+..
T Consensus 83 l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~ 114 (326)
T 3psh_A 83 LKPDVVFVTNYAPSEMIKQISDVNIPVVAISL 114 (326)
T ss_dssp TCCSEEEEETTCCHHHHHHHHTTTCCEEEECS
T ss_pred cCCCEEEEeCCCChHHHHHHHHcCCCEEEEec
Confidence 5899999875432 233444677999999743
No 359
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=26.08 E-value=71 Score=27.54 Aligned_cols=32 Identities=13% Similarity=-0.012 Sum_probs=26.3
Q ss_pred CCeeEEEecCCcc------hHHHHHHHcCCceEEEech
Q 012744 106 EKTACLIADGAAG------WAIEVAEKMKLRRAVVVIT 137 (457)
Q Consensus 106 ~~~D~vv~D~~~~------~~~~~A~~lgiP~v~~~~~ 137 (457)
.+||+|++-.... .+..+|..||+|++.....
T Consensus 115 ~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~~ 152 (255)
T 1efv_B 115 EKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQ 152 (255)
T ss_dssp HTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred cCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceEE
Confidence 5799999987553 8899999999999986543
No 360
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=26.08 E-value=51 Score=28.24 Aligned_cols=33 Identities=27% Similarity=0.369 Sum_probs=25.2
Q ss_pred CEEEEEcCCCC--cChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 4 PHVVVIPNPEQ--GHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 4 ~~vl~~~~~~~--GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
.+|++++.++- |+ -+.+|+.|+.+|++|+++..
T Consensus 59 ~~v~VlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~ 93 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGD---GLVCARHLKLFGYNPVVFYP 93 (246)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCCEEEECC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEc
Confidence 47888887653 33 36789999999999998754
No 361
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=26.07 E-value=89 Score=22.68 Aligned_cols=43 Identities=19% Similarity=0.173 Sum_probs=24.7
Q ss_pred HHHHHHHhcCCCCCeeEEEecCCcc--hHHHHHHHc-----CCceEEEechhh
Q 012744 94 EGLIEEIHGREGEKTACLIADGAAG--WAIEVAEKM-----KLRRAVVVITSA 139 (457)
Q Consensus 94 ~~~~~~l~~~~~~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~~~ 139 (457)
.+.++.+.. .+||+||.|.... .+..+.+.+ .+|++.++....
T Consensus 41 ~~a~~~l~~---~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~~ 90 (130)
T 3eod_A 41 VDALELLGG---FTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATEN 90 (130)
T ss_dssp HHHHHHHTT---CCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCC
T ss_pred HHHHHHHhc---CCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCC
Confidence 344444444 7899999997544 233333322 588888766543
No 362
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=26.07 E-value=1.6e+02 Score=22.99 Aligned_cols=88 Identities=13% Similarity=0.023 Sum_probs=55.8
Q ss_pred cChHHHHHHHHHHHhC--CCeEEEEeCCcchhHHHh-hhcCCCCCCCCeEEEecCCCCCCCCCcchHHHHHHHHHHhcch
Q 012744 15 GHVIPLLELSQNLAKH--GLRITFVNSEYNHKRVLE-SLEGKNYIGEQIHLVSIPDGMEPWDDRSDMRKLLEKRLQVMPG 91 (457)
Q Consensus 15 GH~~p~~~la~~L~~~--Gh~Vt~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (457)
.+=.-++.+|+.|.+. ||++. .+......+.+ . |+....+..+-.. .++
T Consensus 21 ~dK~~~v~~ak~~~~ll~Gf~l~--AT~gTa~~L~e~~---------Gl~v~~v~k~~eG-----------------G~p 72 (152)
T 1b93_A 21 HCKQMLMSWVERHQPLLEQHVLY--ATGTTGNLISRAT---------GMNVNAMLSGPMG-----------------GDQ 72 (152)
T ss_dssp GGHHHHHHHHHHTHHHHTTSEEE--EETTHHHHHHHHH---------CCCCEEECCGGGT-----------------HHH
T ss_pred hhHHHHHHHHHHHHHHhCCCEEE--EccHHHHHHHHHh---------CceeEEEEecCCC-----------------CCc
Confidence 3445689999999998 99664 45566677776 5 6655554321100 123
Q ss_pred HHHHHHHHHhcCCCCCeeEEEecCC--cc--------hHHHHHHHcCCceEEEec
Q 012744 92 KLEGLIEEIHGREGEKTACLIADGA--AG--------WAIEVAEKMKLRRAVVVI 136 (457)
Q Consensus 92 ~~~~~~~~l~~~~~~~~D~vv~D~~--~~--------~~~~~A~~lgiP~v~~~~ 136 (457)
++-+++.. .+.|+||.-.. .. .-..+|-..+||++.-..
T Consensus 73 ~I~d~I~~------geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~la 121 (152)
T 1b93_A 73 QVGALISE------GKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNVA 121 (152)
T ss_dssp HHHHHHHT------TCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSHH
T ss_pred hHHHHHHC------CCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCHH
Confidence 44444444 88999998654 22 245678889999998443
No 363
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=26.05 E-value=69 Score=27.53 Aligned_cols=32 Identities=22% Similarity=0.079 Sum_probs=26.3
Q ss_pred CCeeEEEecCCcc------hHHHHHHHcCCceEEEech
Q 012744 106 EKTACLIADGAAG------WAIEVAEKMKLRRAVVVIT 137 (457)
Q Consensus 106 ~~~D~vv~D~~~~------~~~~~A~~lgiP~v~~~~~ 137 (457)
.+||+|++-.... .+..+|..||+|++.....
T Consensus 112 ~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 149 (252)
T 1efp_B 112 EGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASK 149 (252)
T ss_dssp HTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEE
T ss_pred cCCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEEE
Confidence 5799999987552 8899999999999986543
No 364
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=25.95 E-value=79 Score=26.97 Aligned_cols=37 Identities=14% Similarity=0.258 Sum_probs=25.2
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHh-CCCeEEEEeCC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAK-HGLRITFVNSE 40 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~-~Gh~Vt~~~~~ 40 (457)
|.+.+.++++.++ |-+- ..+++.|++ +|++|+++.-.
T Consensus 1 ~~~~k~vlITGas-ggIG--~~~a~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 1 SSGIHVALVTGGN-KGIG--LAIVRDLCRLFSGDVVLTARD 38 (276)
T ss_dssp -CCCCEEEESSCS-SHHH--HHHHHHHHHHSSSEEEEEESS
T ss_pred CCCCCEEEEeCCC-cHHH--HHHHHHHHHhcCCeEEEEeCC
Confidence 3455666666554 3333 468999999 99999998754
No 365
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=25.89 E-value=2.1e+02 Score=24.91 Aligned_cols=79 Identities=9% Similarity=0.027 Sum_probs=49.8
Q ss_pred CeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcchHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEE
Q 012744 32 LRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSDMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACL 111 (457)
Q Consensus 32 h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~v 111 (457)
.++.+..++.+..+...+ |++...+. +...... ...+.+.++++.+++ .+..+|
T Consensus 163 ~~~~vt~H~af~Y~~~~y---------Gl~~~~~~-~~~~~~e-------------ps~~~l~~l~~~ik~---~~v~~i 216 (282)
T 3mfq_A 163 SRYLVTPHDAFNYFAASY---------DFTLYAPQ-GVSTDSE-------------VANSDMIETVNLIID---HNIKAI 216 (282)
T ss_dssp GCEEECSSSCCHHHHHHT---------TCEEECSS-CSSSCSC-------------CCHHHHHHHHHHHHH---HTCCEE
T ss_pred CcEEEEECchHHHHHHHC---------CCeEeccc-ccCCCCC-------------CCHHHHHHHHHHHHH---cCCCEE
Confidence 355555578888888888 78876642 2222111 112345556666655 788999
Q ss_pred EecCCcc--hHHH---HHHHcCCceEEEec
Q 012744 112 IADGAAG--WAIE---VAEKMKLRRAVVVI 136 (457)
Q Consensus 112 v~D~~~~--~~~~---~A~~lgiP~v~~~~ 136 (457)
+++.... .+.. +|+..|+|.+.+.+
T Consensus 217 f~e~~~~~~~~~~l~~~a~~~g~~v~~l~~ 246 (282)
T 3mfq_A 217 FTESTTNPERMKKLQEAVKAKGGQVEVVTG 246 (282)
T ss_dssp ECBTTSCTHHHHHHHHHHHTTSCCCEEETT
T ss_pred EEeCCCChHHHHHHHHHHHhcCCceEEecc
Confidence 9998665 2333 36788999998753
No 366
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=25.88 E-value=79 Score=27.68 Aligned_cols=38 Identities=24% Similarity=0.325 Sum_probs=28.8
Q ss_pred CCCEEEEEcCCCCcChHH--HHHHHHHHHhCC-CeEEEEeCC
Q 012744 2 SSPHVVVIPNPEQGHVIP--LLELSQNLAKHG-LRITFVNSE 40 (457)
Q Consensus 2 ~~~~vl~~~~~~~GH~~p--~~~la~~L~~~G-h~Vt~~~~~ 40 (457)
++.|||++ .+..+|-.+ ...|++.|.+.| .+|++...+
T Consensus 3 ~~~kvLiv-~G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 3 KPIKTLLI-TGQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCEEEEEE-ESCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CceEEEEE-cCCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 46789999 444488644 367888888898 999999864
No 367
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=25.85 E-value=1.3e+02 Score=23.79 Aligned_cols=39 Identities=13% Similarity=0.009 Sum_probs=29.3
Q ss_pred CEEEEEcCCCCcChHHHHH--HHHHHHhCCCeEEEEeCCcc
Q 012744 4 PHVVVIPNPEQGHVIPLLE--LSQNLAKHGLRITFVNSEYN 42 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~--la~~L~~~Gh~Vt~~~~~~~ 42 (457)
...+++..|..|+...... +++.|.++|+.|..+..+..
T Consensus 32 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~ 72 (210)
T 1imj_A 32 RFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGL 72 (210)
T ss_dssp SCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTTS
T ss_pred CceEEEECCCCCccceeecchhHHHHHHCCCeEEEecCCCC
Confidence 3456666777777777777 59999999999988765443
No 368
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=25.83 E-value=1.1e+02 Score=27.16 Aligned_cols=39 Identities=15% Similarity=0.072 Sum_probs=29.5
Q ss_pred CCEEEEEcCCCCc-C---hHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 3 SPHVVVIPNPEQG-H---VIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 3 ~~~vl~~~~~~~G-H---~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
++||+++..|..+ | +.....++++|.+.||+|+.+.+..
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~ 55 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAE 55 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4688888766443 2 3467889999999999999998544
No 369
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=25.79 E-value=73 Score=21.07 Aligned_cols=49 Identities=16% Similarity=0.222 Sum_probs=37.5
Q ss_pred cCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHh
Q 012744 402 IGREEIKNKVDQVLGDQNFKARALKLKEKALSSVREGGSSNKAIQNFVQSIK 453 (457)
Q Consensus 402 ~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 453 (457)
..++++.+.-.+.|.|+.++.....=+..|.+. .|-....|++.++...
T Consensus 12 ~~Re~li~~Av~FLqdp~V~~sp~~~K~~FL~s---KGLt~eEI~~Al~ra~ 60 (70)
T 2w84_A 12 LPREPLIATAVKFLQNSRVRQSPLATRRAFLKK---KGLTDEEIDMAFQQSG 60 (70)
T ss_dssp CCCHHHHHHHHHHHCSTTGGGSCHHHHHHHHHH---TTCCHHHHHHHHHHHT
T ss_pred CchHHHHHHHHHHhCChhhhhCCHHHHHHHHHH---cCCCHHHHHHHHHHcc
Confidence 345666666667888998888887777888775 8898999999887753
No 370
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=25.77 E-value=55 Score=29.17 Aligned_cols=33 Identities=18% Similarity=0.413 Sum_probs=25.9
Q ss_pred CEEEEEcCCCC--cChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 4 PHVVVIPNPEQ--GHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 4 ~~vl~~~~~~~--GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
.+|++++.++- |+- +.+|+.|+.+|++|+++..
T Consensus 133 ~~vlVlcG~GNNGGDG---lv~AR~L~~~G~~V~V~~~ 167 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQG---ISCGRHLANHDVQVILFLP 167 (306)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCEEEEECC
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCcEEEEEe
Confidence 47888887654 443 6889999999999999865
No 371
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=25.71 E-value=84 Score=26.56 Aligned_cols=34 Identities=6% Similarity=-0.002 Sum_probs=23.0
Q ss_pred CCeeEEEecCCcc--hHHHHHHH----cCCceEEEechhh
Q 012744 106 EKTACLIADGAAG--WAIEVAEK----MKLRRAVVVITSA 139 (457)
Q Consensus 106 ~~~D~vv~D~~~~--~~~~~A~~----lgiP~v~~~~~~~ 139 (457)
++||++|+-.-.. .++.-|++ .|+|+|.++..+.
T Consensus 63 ~~pDfvI~isPN~a~PGP~~ARE~l~~~~iP~IvI~D~p~ 102 (283)
T 1qv9_A 63 FEPDFIVYGGPNPAAPGPSKAREMLADSEYPAVIIGDAPG 102 (283)
T ss_dssp HCCSEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEEEGGG
T ss_pred cCCCEEEEECCCCCCCCchHHHHHHHhCCCCEEEEcCCcc
Confidence 7899866544222 55555544 4999999987775
No 372
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=25.70 E-value=2.8e+02 Score=22.85 Aligned_cols=43 Identities=14% Similarity=0.103 Sum_probs=30.4
Q ss_pred EEEEEcCCCCcChHHHHHHHHH-HHhCCCeEEEEeCCcchhHHH
Q 012744 5 HVVVIPNPEQGHVIPLLELSQN-LAKHGLRITFVNSEYNHKRVL 47 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~-L~~~Gh~Vt~~~~~~~~~~~~ 47 (457)
-+++...|+.|=-.=++.+|.. +.+.|..|.+++.....+.+.
T Consensus 32 l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~~~ 75 (251)
T 2zts_A 32 TVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDLR 75 (251)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHHHH
Confidence 3566667777877777787655 456688999999876655443
No 373
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=25.69 E-value=95 Score=26.85 Aligned_cols=36 Identities=8% Similarity=0.219 Sum_probs=25.5
Q ss_pred CEEEEEcCCCC-cChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 4 PHVVVIPNPEQ-GHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 4 ~~vl~~~~~~~-GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
.|+++++.++. +=+- .++|++|+++|++|+++.-..
T Consensus 26 ~k~vlVTGasg~~GIG--~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 26 GKKILITGLLSNKSIA--YGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp TCEEEECCCCSTTCHH--HHHHHHHHHTTCEEEEEECTT
T ss_pred CCEEEEECCCCCCCHH--HHHHHHHHHcCCEEEEeeCch
Confidence 36777777541 1122 578999999999999987655
No 374
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=25.63 E-value=70 Score=27.23 Aligned_cols=30 Identities=13% Similarity=0.138 Sum_probs=20.7
Q ss_pred CCeeEEEecCCcc--hHHHHHHHcCCceEEEe
Q 012744 106 EKTACLIADGAAG--WAIEVAEKMKLRRAVVV 135 (457)
Q Consensus 106 ~~~D~vv~D~~~~--~~~~~A~~lgiP~v~~~ 135 (457)
.+||+||...... ....--+..|||++.+.
T Consensus 58 l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (256)
T 2r7a_A 58 LRPDSVITWQDAGPQIVLDQLRAQKVNVVTLP 89 (256)
T ss_dssp TCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred cCCCEEEEcCCCCCHHHHHHHHHcCCcEEEec
Confidence 6999999875432 23334467899998874
No 375
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=25.63 E-value=1.1e+02 Score=25.85 Aligned_cols=29 Identities=17% Similarity=0.086 Sum_probs=22.6
Q ss_pred CCeeEEEecCCcc-------hHHHHHHHcCCceEEE
Q 012744 106 EKTACLIADGAAG-------WAIEVAEKMKLRRAVV 134 (457)
Q Consensus 106 ~~~D~vv~D~~~~-------~~~~~A~~lgiP~v~~ 134 (457)
.+||+|++|.... .|..+.-.+++|.|.+
T Consensus 106 ~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 141 (237)
T 3goc_A 106 CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGV 141 (237)
T ss_dssp SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEE
T ss_pred CCCCEEEEeCceeecCCCcchhheeeeecCCCEEee
Confidence 6899999998543 4555667778999996
No 376
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=25.58 E-value=86 Score=22.29 Aligned_cols=34 Identities=12% Similarity=0.063 Sum_probs=22.5
Q ss_pred CCeeEEEecCCcc--hHHHHHHHc-----CCceEEEechhh
Q 012744 106 EKTACLIADGAAG--WAIEVAEKM-----KLRRAVVVITSA 139 (457)
Q Consensus 106 ~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~~~ 139 (457)
.+||+||.|...+ .+..+.+.+ ++|.+.++....
T Consensus 46 ~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 86 (120)
T 1tmy_A 46 LKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQ 86 (120)
T ss_dssp HCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTTC
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCCC
Confidence 5799999997654 344444433 588888766543
No 377
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=25.45 E-value=68 Score=27.53 Aligned_cols=37 Identities=14% Similarity=0.062 Sum_probs=28.6
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
..+++..|..|+..-+..+++.|.++|++|..+-.+.
T Consensus 47 p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 83 (315)
T 4f0j_A 47 RTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQVG 83 (315)
T ss_dssp CEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTT
T ss_pred CeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecCC
Confidence 3555556666777778899999999999998877654
No 378
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=25.41 E-value=84 Score=24.78 Aligned_cols=28 Identities=25% Similarity=0.232 Sum_probs=21.3
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHhhcC
Q 012744 271 VIYVAFGSHTVLEQNQFQELALGLEICN 298 (457)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~ 298 (457)
+.|+++||....+.+.++..++.+.+..
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCC
Confidence 5799999986556667777888887653
No 379
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=25.33 E-value=1.2e+02 Score=21.37 Aligned_cols=32 Identities=16% Similarity=0.115 Sum_probs=20.8
Q ss_pred CCeeEEEecCCcc--hHHHHHHHc-----CCceEEEech
Q 012744 106 EKTACLIADGAAG--WAIEVAEKM-----KLRRAVVVIT 137 (457)
Q Consensus 106 ~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~ 137 (457)
.+||+|+.|...+ .+..+.+.+ .+|.+.++..
T Consensus 44 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 44 GNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 6899999997654 344444332 5787777654
No 380
>3bzy_A ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3bzl_A 3bzv_A 3bzx_A 3bzo_A 3bzz_A 3c03_B 3c00_A
Probab=24.91 E-value=1.3e+02 Score=18.74 Aligned_cols=34 Identities=18% Similarity=0.356 Sum_probs=29.6
Q ss_pred CccCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Q 012744 400 GIIGREEIKNKVDQVLGDQNFKARALKLKEKALS 433 (457)
Q Consensus 400 ~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~ 433 (457)
-+.|.+++.+-..+.-.||.++.+-++++..+..
T Consensus 5 lkMskqEvK~E~Ke~EGdP~iK~r~R~~~re~a~ 38 (54)
T 3bzy_A 5 ASMSKDEVKREAKDTDGNPEIKGERRRLHSEIQS 38 (54)
T ss_pred cCCCHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999888888877764
No 381
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=24.78 E-value=40 Score=26.99 Aligned_cols=34 Identities=12% Similarity=0.061 Sum_probs=23.9
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhC-CCeEEEEeCCc
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKH-GLRITFVNSEY 41 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~-Gh~Vt~~~~~~ 41 (457)
++||+++-.|..| ..+|+.|.++ ||+|+++....
T Consensus 39 ~~~v~IiG~G~~G-----~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIG-----TGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHH-----HHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHH-----HHHHHHHHhccCCeEEEEECCH
Confidence 4577777433333 4568899998 99999987644
No 382
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=24.74 E-value=89 Score=27.51 Aligned_cols=33 Identities=21% Similarity=0.322 Sum_probs=25.3
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEe
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVN 38 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~ 38 (457)
|++|+|+++... .......+.|.++||+|.+..
T Consensus 5 ~~~mki~v~~~~-----~~~~~~~~~L~~~g~~v~~~~ 37 (300)
T 2rir_A 5 LTGLKIAVIGGD-----ARQLEIIRKLTEQQADIYLVG 37 (300)
T ss_dssp CCSCEEEEESBC-----HHHHHHHHHHHHTTCEEEEES
T ss_pred ccCCEEEEECCC-----HHHHHHHHHHHhCCCEEEEEe
Confidence 567898888432 356677899999999998764
No 383
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=24.71 E-value=74 Score=27.00 Aligned_cols=38 Identities=13% Similarity=0.043 Sum_probs=29.0
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
..++++..|..++..-+..+++.|.++|++|..+-.+.
T Consensus 42 ~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 79 (303)
T 3pe6_A 42 KALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVG 79 (303)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCTT
T ss_pred CeEEEEECCCCchhhHHHHHHHHHHhCCCcEEEeCCCC
Confidence 34566666767777778889999999999998876544
No 384
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=24.70 E-value=59 Score=28.13 Aligned_cols=33 Identities=18% Similarity=0.413 Sum_probs=25.7
Q ss_pred CEEEEEcCCCC--cChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 4 PHVVVIPNPEQ--GHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 4 ~~vl~~~~~~~--GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
.+|++++.++- |+- +.+|+.|+.+|++|+++..
T Consensus 86 ~~vlVlcG~GNNGGDG---lv~AR~L~~~G~~V~v~~~ 120 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQG---ISCGRHLANHDVQVILFLP 120 (259)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCEEEEECC
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCeEEEEEe
Confidence 47888887654 443 6889999999999999864
No 385
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=24.70 E-value=74 Score=28.24 Aligned_cols=34 Identities=21% Similarity=0.328 Sum_probs=23.4
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
.++|+++ |+.|.+- ..|++.|.++||+|+.+.-.
T Consensus 11 ~~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 11 GSLVLVT--GANGFVA--SHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp TCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEE--CCccHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 4555544 4445444 46789999999999988754
No 386
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=24.67 E-value=1e+02 Score=21.96 Aligned_cols=33 Identities=9% Similarity=0.051 Sum_probs=21.9
Q ss_pred CCeeEEEecCCcc--hHHHHHHHc----CCceEEEechh
Q 012744 106 EKTACLIADGAAG--WAIEVAEKM----KLRRAVVVITS 138 (457)
Q Consensus 106 ~~~D~vv~D~~~~--~~~~~A~~l----giP~v~~~~~~ 138 (457)
.+||+||.|...+ .+..+.+.+ .+|.+.++...
T Consensus 45 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 83 (122)
T 1zgz_A 45 QSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRS 83 (122)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSC
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCC
Confidence 6899999997654 344444443 57877776544
No 387
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=24.59 E-value=98 Score=23.38 Aligned_cols=43 Identities=5% Similarity=0.036 Sum_probs=26.7
Q ss_pred HHHHHHHHhcCCCCCeeEEEecCCcc--hHHHHHHHc-----CCceEEEechh
Q 012744 93 LEGLIEEIHGREGEKTACLIADGAAG--WAIEVAEKM-----KLRRAVVVITS 138 (457)
Q Consensus 93 ~~~~~~~l~~~~~~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 138 (457)
..+.++.+.. .+||+||.|.... .+..+.+.+ .+|+|.++...
T Consensus 47 ~~~a~~~l~~---~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 96 (153)
T 3hv2_A 47 ATQALQLLAS---REVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDP 96 (153)
T ss_dssp HHHHHHHHHH---SCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCC
T ss_pred HHHHHHHHHc---CCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCC
Confidence 3444455544 7899999997654 344444332 58888776544
No 388
>3c01_A Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=24.57 E-value=1.2e+02 Score=18.32 Aligned_cols=32 Identities=22% Similarity=0.437 Sum_probs=26.9
Q ss_pred cCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Q 012744 402 IGREEIKNKVDQVLGDQNFKARALKLKEKALS 433 (457)
Q Consensus 402 ~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~ 433 (457)
.|.+++.+-..+.-.||.++.+-++++..+..
T Consensus 1 MskqEvK~E~Ke~EGdP~iK~~~R~~~~e~a~ 32 (48)
T 3c01_A 1 MDKEEVKREMKEQEGNPEVKSKRREVHMEILS 32 (48)
T ss_pred CCHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Confidence 36789999999999999998888888877764
No 389
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=24.46 E-value=72 Score=25.84 Aligned_cols=39 Identities=21% Similarity=0.416 Sum_probs=26.2
Q ss_pred CCC-CEEEEEcCCCCcChHHHH-HHHHHHHhCCCeEEEEeCC
Q 012744 1 MSS-PHVVVIPNPEQGHVIPLL-ELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 1 m~~-~~vl~~~~~~~GH~~p~~-~la~~L~~~Gh~Vt~~~~~ 40 (457)
|.+ +||+++... .|+..-+. .+++.|.+.|++|.++.-.
T Consensus 1 M~~mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~ 41 (199)
T 2zki_A 1 MSCKPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVR 41 (199)
T ss_dssp --CCCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CCCCcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehh
Confidence 553 688888777 88765543 4566777789999887643
No 390
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=24.38 E-value=63 Score=26.61 Aligned_cols=33 Identities=15% Similarity=0.201 Sum_probs=23.3
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
||+++ |+.|-+- ..++++|.++||+|+.+.-..
T Consensus 2 ~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 2 KIFIV--GSTGRVG--KSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp EEEEE--STTSHHH--HHHHHHHTTSSCEEEEEESSG
T ss_pred eEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEECCc
Confidence 55444 4445444 478899999999999988543
No 391
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=24.32 E-value=79 Score=30.50 Aligned_cols=40 Identities=13% Similarity=0.140 Sum_probs=31.8
Q ss_pred CCEEEEEcCCCCc---ChHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012744 3 SPHVVVIPNPEQG---HVIPLLELSQNLAKHGLRITFVNSEYN 42 (457)
Q Consensus 3 ~~~vl~~~~~~~G---H~~p~~~la~~L~~~Gh~Vt~~~~~~~ 42 (457)
++|.+|++.|..| -=.-...|+..|+.||++||..--.++
T Consensus 2 ~~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~dpy 44 (535)
T 3nva_A 2 PNKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDPY 44 (535)
T ss_dssp CCEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEECS
T ss_pred CceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecCcc
Confidence 4689999988554 445688999999999999999875443
No 392
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=24.26 E-value=70 Score=28.58 Aligned_cols=33 Identities=21% Similarity=0.356 Sum_probs=23.1
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
.++|+++ |+.|-+- ..|+++|.++||+|+.+.-
T Consensus 27 ~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 27 RKRILIT--GGAGFVG--SHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEE--cCccHHH--HHHHHHHHHCCCEEEEEeC
Confidence 4555544 4445444 4678899999999999874
No 393
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=24.25 E-value=78 Score=26.59 Aligned_cols=36 Identities=17% Similarity=0.342 Sum_probs=23.1
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|.. |+++++.++.| + =.++|++|+++|++|+++.-.
T Consensus 1 Ms~-k~vlVTGas~G-I--G~a~a~~l~~~G~~V~~~~r~ 36 (235)
T 3l6e_A 1 MSL-GHIIVTGAGSG-L--GRALTIGLVERGHQVSMMGRR 36 (235)
T ss_dssp --C-CEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCC-CEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEECC
Confidence 443 35555555442 2 257899999999999887654
No 394
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=24.25 E-value=77 Score=27.04 Aligned_cols=35 Identities=11% Similarity=0.141 Sum_probs=25.4
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
.+|.++++.++. -+ =.++|++|+++|++|+++...
T Consensus 6 ~~k~vlVTGas~-gI--G~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 6 FVRHALITAGTK-GL--GKQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CCCEEEETTTTS-HH--HHHHHHHHHHTTCEEEEEESS
T ss_pred ccCEEEEeCCCc-hh--HHHHHHHHHHCCCEEEEEcCC
Confidence 456777776654 22 257899999999999988654
No 395
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=24.23 E-value=85 Score=26.70 Aligned_cols=35 Identities=11% Similarity=0.148 Sum_probs=25.5
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
+.|+++++.++.| + =.++|+.|+++|++|+++.-.
T Consensus 6 ~~k~vlVTGas~G-I--G~aia~~l~~~G~~V~~~~r~ 40 (252)
T 3h7a_A 6 RNATVAVIGAGDY-I--GAEIAKKFAAEGFTVFAGRRN 40 (252)
T ss_dssp CSCEEEEECCSSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 3466777766543 2 358899999999999988753
No 396
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=24.18 E-value=2e+02 Score=21.05 Aligned_cols=50 Identities=10% Similarity=-0.093 Sum_probs=29.3
Q ss_pred cCCceeccccccchhhhHHhhhhhhceeEEeeccCCCccCHHHHHHHHHHHhCCH
Q 012744 364 NGVPFLCWPFFADQFMNTTYICDVWKVGLRLERNQSGIIGREEIKNKVDQVLGDQ 418 (457)
Q Consensus 364 ~GvP~l~~P~~~DQ~~na~~v~~~lG~g~~l~~~~~~~~~~~~l~~~i~~~l~~~ 418 (457)
..+|.|++-...|.......+.. .|+--.+. +.++.++|..+|++++...
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~-~ga~~~l~----KP~~~~~L~~~i~~~~~~~ 120 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAIND-AGIHQFLT----KPWHPEQLLSSARNAARMF 120 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHH-TTCCEEEE----SSCCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHh-hchhhhcc----CCCCHHHHHHHHHHHHHHH
Confidence 35677766444443333333333 14533443 4589999999999988543
No 397
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=24.17 E-value=99 Score=22.28 Aligned_cols=40 Identities=5% Similarity=-0.025 Sum_probs=23.9
Q ss_pred HHHHHHhcCCCCCeeEEEecCCcc--hHHHHHHH-------cCCceEEEech
Q 012744 95 GLIEEIHGREGEKTACLIADGAAG--WAIEVAEK-------MKLRRAVVVIT 137 (457)
Q Consensus 95 ~~~~~l~~~~~~~~D~vv~D~~~~--~~~~~A~~-------lgiP~v~~~~~ 137 (457)
+.++.+.. .+||+||.|.... .+..+.+. .++|++.++..
T Consensus 38 ~a~~~l~~---~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 86 (127)
T 3i42_A 38 DALHAMST---RGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGF 86 (127)
T ss_dssp HHHHHHHH---SCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC
T ss_pred HHHHHHHh---cCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECC
Confidence 34444444 7899999997654 34444332 35777776544
No 398
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=24.15 E-value=2.6e+02 Score=26.26 Aligned_cols=41 Identities=20% Similarity=0.347 Sum_probs=31.6
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHh-CCCeEEEEeCCcchhH
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAK-HGLRITFVNSEYNHKR 45 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~-~Gh~Vt~~~~~~~~~~ 45 (457)
-+++...|+.|=-.=++.+|..++. .|..|.+++.......
T Consensus 205 liiI~G~pG~GKTtl~l~ia~~~~~~~g~~Vl~~s~E~s~~~ 246 (454)
T 2r6a_A 205 LIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQ 246 (454)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEESSSCHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCCCHHH
Confidence 3566667788888888999998876 6899999997665443
No 399
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=24.14 E-value=77 Score=26.44 Aligned_cols=37 Identities=8% Similarity=0.028 Sum_probs=27.4
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
..+++..|..|+..-...+++.|.++|++|..+-.+.
T Consensus 13 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~~G 49 (267)
T 3sty_A 13 KHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLGA 49 (267)
T ss_dssp CEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTT
T ss_pred CeEEEECCCCCCcchHHHHHHHHHhcCCeEEEecccc
Confidence 3455555666666777799999999999998876544
No 400
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=24.13 E-value=92 Score=24.61 Aligned_cols=28 Identities=18% Similarity=0.252 Sum_probs=22.3
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHhhcC
Q 012744 271 VIYVAFGSHTVLEQNQFQELALGLEICN 298 (457)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~ 298 (457)
.+|+++||......+.+...++.+...+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQLS 30 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhCC
Confidence 5899999987666677888888887754
No 401
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=24.08 E-value=80 Score=27.95 Aligned_cols=30 Identities=20% Similarity=0.311 Sum_probs=25.8
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
||.|+-.|..|. ++|+.|.++||+|++..-
T Consensus 5 kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~dr 34 (300)
T 3obb_A 5 QIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (300)
T ss_dssp EEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred EEEEeeehHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 799999988884 689999999999998753
No 402
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=23.97 E-value=67 Score=28.10 Aligned_cols=36 Identities=14% Similarity=0.210 Sum_probs=23.9
Q ss_pred CC-CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 1 MS-SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 1 m~-~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|. +++|+++ |+.|.+-. .++++|.++||+|+.++-.
T Consensus 1 M~~~~~ilVt--GatG~iG~--~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 1 MGSRSRILLI--GATGYIGR--HVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp -CCCCCEEEE--STTSTTHH--HHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEEE--cCCcHHHH--HHHHHHHhCCCCEEEEECC
Confidence 55 4455443 44555543 5789999999999988754
No 403
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=23.96 E-value=1.2e+02 Score=23.92 Aligned_cols=29 Identities=17% Similarity=0.192 Sum_probs=22.6
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHhhcC
Q 012744 270 SVIYVAFGSHTVLEQNQFQELALGLEICN 298 (457)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~ 298 (457)
..+|+++||......+.+...++++....
T Consensus 5 ~~v~i~LGSNlGd~~~~l~~A~~~L~~~~ 33 (161)
T 3qbc_A 5 IQAYLGLGSNIGDRESQLNDAIKILNEYD 33 (161)
T ss_dssp EEEEEEEEECSSSHHHHHHHHHHHHHHST
T ss_pred cEEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 37999999986666677888888887743
No 404
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=23.95 E-value=49 Score=29.67 Aligned_cols=33 Identities=18% Similarity=0.307 Sum_probs=25.5
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
.++|.|+-.|..| ..+|..|+++||+|++....
T Consensus 6 ~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 6 AGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSC
T ss_pred CceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 4678888776666 46788999999999998654
No 405
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=23.94 E-value=73 Score=28.25 Aligned_cols=33 Identities=27% Similarity=0.275 Sum_probs=25.5
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
.++|.|+-.|..| ..+|+.|+++||+|++....
T Consensus 21 m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 21 MMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp SCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 3688888666555 56789999999999987643
No 406
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=23.90 E-value=29 Score=28.92 Aligned_cols=33 Identities=12% Similarity=0.257 Sum_probs=23.3
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
|||+++-. |.+ -..+|+.|.++||+|+++....
T Consensus 1 M~iiIiG~---G~~--G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGG---ETT--AYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECC---HHH--HHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECC---CHH--HHHHHHHHHhCCCeEEEEECCH
Confidence 35666543 333 3478999999999999998644
No 407
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=23.89 E-value=63 Score=27.32 Aligned_cols=37 Identities=16% Similarity=0.175 Sum_probs=29.7
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
..++++..|..|+..-+..+++.|+++|+.|..+-.+
T Consensus 49 ~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 85 (258)
T 2fx5_A 49 HPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAETS 85 (258)
T ss_dssp EEEEEEECCTTCCGGGGHHHHHHHHHHTCEEEEECCS
T ss_pred ceEEEEECCCCCCchhHHHHHHHHHhCCeEEEEecCC
Confidence 3567777777788888899999999999998876554
No 408
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=23.80 E-value=61 Score=29.17 Aligned_cols=35 Identities=20% Similarity=0.019 Sum_probs=24.4
Q ss_pred CCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 2 SSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 2 ~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
+.++|+++ |+.|.+- ..|+++|.++||+|+.+.-.
T Consensus 8 ~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 42 (357)
T 1rkx_A 8 QGKRVFVT--GHTGFKG--GWLSLWLQTMGATVKGYSLT 42 (357)
T ss_dssp TTCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEE--CCCchHH--HHHHHHHHhCCCeEEEEeCC
Confidence 34565544 5556554 45788999999999998753
No 409
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=23.73 E-value=2.1e+02 Score=28.94 Aligned_cols=110 Identities=9% Similarity=0.033 Sum_probs=63.5
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcchHHHHH
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSDMRKLL 82 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (457)
+.||++.+.++-+|-.-..-++..|...|++|.........+.+.+.-.. .+.+.+.++.-..
T Consensus 596 r~kVvlatvg~D~HdiG~~iVa~~l~~~GfeVi~lG~~v~~eeiv~aA~e-----~~adiVglSsl~~------------ 658 (727)
T 1req_A 596 RPRILLAKMGQDGHDRGQKVIATAYADLGFDVDVGPLFQTPEETARQAVE-----ADVHVVGVSSLAG------------ 658 (727)
T ss_dssp CCEEEEECBTTCCCCHHHHHHHHHHHHHTCEEEECCTTBCHHHHHHHHHH-----TTCSEEEEEECSS------------
T ss_pred CCEEEEEeCCcchhHHHHHHHHHHHHhCCeEEEeCCCCCCHHHHHHHHHH-----cCCCEEEEeeecH------------
Confidence 67999999999999999999999999999999887654333322221110 1555565542211
Q ss_pred HHHHHhcchHHHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHcCCceEEE
Q 012744 83 EKRLQVMPGKLEGLIEEIHGREGEKTACLIADGAAGWAIEVAEKMKLRRAVV 134 (457)
Q Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~~~~~D~vv~D~~~~~~~~~A~~lgiP~v~~ 134 (457)
.....+.++++.|++.+-...-++|.-.....-...++..|+-.+..
T Consensus 659 -----~~~~~~~~vi~~L~~~G~~~i~VivGG~~p~~d~~~l~~~GaD~~f~ 705 (727)
T 1req_A 659 -----GHLTLVPALRKELDKLGRPDILITVGGVIPEQDFDELRKDGAVEIYT 705 (727)
T ss_dssp -----CHHHHHHHHHHHHHHTTCTTSEEEEEESCCGGGHHHHHHTTEEEEEC
T ss_pred -----hHHHHHHHHHHHHHhcCCCCCEEEEcCCCccccHHHHHhCCCCEEEc
Confidence 01123445555555532012233333312223345567788776653
No 410
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=23.68 E-value=66 Score=27.91 Aligned_cols=33 Identities=30% Similarity=0.416 Sum_probs=25.5
Q ss_pred CEEEEEcCCCC--cChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 4 PHVVVIPNPEQ--GHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 4 ~~vl~~~~~~~--GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
.+|++++.++- |+- +.+|+.|+.+|++|+++..
T Consensus 80 ~~VlVlcG~GNNGGDG---lv~AR~L~~~G~~V~V~~~ 114 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDG---LVCARHLKLFGYQPTIYYP 114 (265)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCEEEEECC
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCcEEEEEe
Confidence 47888887654 443 6789999999999998765
No 411
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=23.57 E-value=1.2e+02 Score=21.56 Aligned_cols=33 Identities=9% Similarity=-0.034 Sum_probs=21.9
Q ss_pred CCeeEEEecCCcc--hHHHHHHH----cCCceEEEechh
Q 012744 106 EKTACLIADGAAG--WAIEVAEK----MKLRRAVVVITS 138 (457)
Q Consensus 106 ~~~D~vv~D~~~~--~~~~~A~~----lgiP~v~~~~~~ 138 (457)
.+||+||.|...+ .+..+.+. -.+|.+.++...
T Consensus 46 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 84 (123)
T 1xhf_A 46 YDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRD 84 (123)
T ss_dssp SCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESCC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECCC
Confidence 7899999997654 34444433 368888776544
No 412
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=23.52 E-value=69 Score=27.92 Aligned_cols=32 Identities=25% Similarity=0.255 Sum_probs=24.4
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
+||.|+-.|..| ..+|+.|+++||+|++....
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcCC
Confidence 578888666555 45789999999999987643
No 413
>3i7m_A XAA-Pro dipeptidase; structural genomics, APC64794.2, metall peptidase, creatinase/prolidase N-terminal domain, PSI-2; HET: MSE; 1.46A {Lactobacillus brevis}
Probab=23.52 E-value=46 Score=25.29 Aligned_cols=34 Identities=21% Similarity=0.318 Sum_probs=27.0
Q ss_pred cChHHHHHHHHHHHhCCCeEEEEeCCcchhHHHh
Q 012744 15 GHVIPLLELSQNLAKHGLRITFVNSEYNHKRVLE 48 (457)
Q Consensus 15 GH~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~~ 48 (457)
||.+....|-+.|+++|.+..+++.+.+...+..
T Consensus 1 ~~m~Rl~~l~~~m~~~glDa~li~~~~ni~YlTG 34 (140)
T 3i7m_A 1 GHMTKLEQIQQWTAQHHASMTYLSNPKTIEYLTG 34 (140)
T ss_dssp ---CHHHHHHHHHHHTTCSEEEECCHHHHHHHHC
T ss_pred CcchHHHHHHHHHHHcCCCEEEECCCCcceeecC
Confidence 7888899999999999999999999887666654
No 414
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=23.51 E-value=2.3e+02 Score=25.05 Aligned_cols=76 Identities=12% Similarity=0.096 Sum_probs=50.7
Q ss_pred CeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcchHHHHHHHHHHhcchHHHHHHHHHhcCCCCCeeEE
Q 012744 32 LRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSDMRKLLEKRLQVMPGKLEGLIEEIHGREGEKTACL 111 (457)
Q Consensus 32 h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~D~v 111 (457)
.+..+++++.+..+...+ |++...+. +..... ....+.+.++++.+++ .+..+|
T Consensus 190 ~~~~v~~H~af~Yfa~~y---------Gl~~~~~~-~i~~~~-------------ePs~~~l~~l~~~ik~---~~v~~I 243 (307)
T 3ujp_A 190 QRFLVSCEGAFSYLARDY---------GMEEIYMW-PINAEQ-------------QFTPKQVQTVIEEVKT---NNVPTI 243 (307)
T ss_dssp GCEEEEEESTTHHHHHHT---------TCEEEEEE-SSCCSS-------------CCCHHHHHHHHHHHHT---TTCSEE
T ss_pred CCEEEEECchHHHHHHHC---------CCcEEEee-ccCCCC-------------CCCHHHHHHHHHHHHh---cCCcEE
Confidence 466666788888888888 67765432 111110 1112356666677766 889999
Q ss_pred EecCCcc--hHHHHHHHcCCceEE
Q 012744 112 IADGAAG--WAIEVAEKMKLRRAV 133 (457)
Q Consensus 112 v~D~~~~--~~~~~A~~lgiP~v~ 133 (457)
+++.... .+..+|+..|++...
T Consensus 244 f~e~~~~~k~~~~ia~e~g~~v~~ 267 (307)
T 3ujp_A 244 FCESTVSDKGQKQVAQATGARFGG 267 (307)
T ss_dssp EEETTSCSHHHHHTTTTTCCEEEE
T ss_pred EEeCCCChHHHHHHHHHhCCceee
Confidence 9998666 677889999999753
No 415
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=23.36 E-value=88 Score=26.93 Aligned_cols=36 Identities=17% Similarity=0.151 Sum_probs=28.2
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
+-|+++++.++.| + =.++|++|++.|.+|.++.-..
T Consensus 6 ~gKvalVTGas~G-I--G~aia~~la~~Ga~Vv~~~r~~ 41 (258)
T 4gkb_A 6 QDKVVIVTGGASG-I--GGAISMRLAEERAIPVVFARHA 41 (258)
T ss_dssp TTCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEeCCCCH-H--HHHHHHHHHHcCCEEEEEECCc
Confidence 5588999988774 1 1678999999999999987543
No 416
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=23.32 E-value=81 Score=26.84 Aligned_cols=35 Identities=14% Similarity=0.293 Sum_probs=25.2
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
+.|+++++.++.| + =.++|++|+++|++|+++.-.
T Consensus 6 ~~k~~lVTGas~g-I--G~aia~~l~~~G~~V~~~~r~ 40 (257)
T 3tpc_A 6 KSRVFIVTGASSG-L--GAAVTRMLAQEGATVLGLDLK 40 (257)
T ss_dssp TTCEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 3467777766542 2 257899999999999988643
No 417
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=23.26 E-value=59 Score=29.05 Aligned_cols=36 Identities=17% Similarity=0.208 Sum_probs=26.5
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCC----CeEEEEeCCc
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHG----LRITFVNSEY 41 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~G----h~Vt~~~~~~ 41 (457)
|++|||.|+-.|..|. .+|..|.++| |+|++.....
T Consensus 20 ~~~mkI~iIG~G~mG~-----ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAF-----ALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp --CCCEEEESCSHHHH-----HHHHHHHHTTSSCGGGEEEECSCT
T ss_pred cCCCEEEEECCCHHHH-----HHHHHHHHCCCCCcceEEEECCCc
Confidence 5578899987776663 5688899999 9999886543
No 418
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=23.24 E-value=1e+02 Score=22.78 Aligned_cols=33 Identities=6% Similarity=-0.021 Sum_probs=22.1
Q ss_pred CCeeEEEecCCcc--hHHHHHHHc----CCceEEEechh
Q 012744 106 EKTACLIADGAAG--WAIEVAEKM----KLRRAVVVITS 138 (457)
Q Consensus 106 ~~~D~vv~D~~~~--~~~~~A~~l----giP~v~~~~~~ 138 (457)
.+||+||.|...+ .+..+.+.+ .+|.+.++...
T Consensus 47 ~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~ 85 (136)
T 2qzj_A 47 NKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYIN 85 (136)
T ss_dssp CCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCC
Confidence 7899999997654 344444433 68888776544
No 419
>3ff5_A PEX14P, peroxisomal biogenesis factor 14; protein import, peroxin, 3 helices bundle, protein transport; HET: DPW; 1.80A {Rattus norvegicus}
Probab=23.13 E-value=75 Score=19.84 Aligned_cols=45 Identities=18% Similarity=0.208 Sum_probs=33.5
Q ss_pred CHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHH
Q 012744 403 GREEIKNKVDQVLGDQNFKARALKLKEKALSSVREGGSSNKAIQNFVQ 450 (457)
Q Consensus 403 ~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 450 (457)
.++++.+.-.+.|.|+.++..-..-+..|.+. .|-....+++.++
T Consensus 8 ~Re~li~~Av~FL~dp~V~~sp~~~K~~FL~s---KGLt~~EI~~Al~ 52 (54)
T 3ff5_A 8 FREPLIATAVKFLQNSRVRQSPLATRRAFLKK---KGLTDEEIDLAFQ 52 (54)
T ss_dssp HHHHHHHHHHHHHHCTTGGGSCHHHHHHHHHH---TTCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHhCChhhhcCCHHHHHHHHHH---cCCCHHHHHHHHH
Confidence 44556555557788998888777777788775 7888888888765
No 420
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=23.09 E-value=1e+02 Score=26.45 Aligned_cols=33 Identities=24% Similarity=0.379 Sum_probs=24.5
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
.|.++++.++.| + =.++|++|+++|++|+++..
T Consensus 29 ~k~vlITGas~g-I--G~~la~~l~~~G~~V~~~~r 61 (271)
T 4iin_A 29 GKNVLITGASKG-I--GAEIAKTLASMGLKVWINYR 61 (271)
T ss_dssp CCEEEETTCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 356677766553 2 25789999999999998876
No 421
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=23.00 E-value=1.1e+02 Score=22.73 Aligned_cols=41 Identities=12% Similarity=0.021 Sum_probs=24.7
Q ss_pred HHHHHHHhcCCCCCeeEEEecCCcc--hHHHHHHHc-----CCceEEEech
Q 012744 94 EGLIEEIHGREGEKTACLIADGAAG--WAIEVAEKM-----KLRRAVVVIT 137 (457)
Q Consensus 94 ~~~~~~l~~~~~~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~ 137 (457)
.+.++.+.. ..||+||.|...+ .+..+.+.+ ++|++.++..
T Consensus 39 ~~al~~~~~---~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~~ 86 (141)
T 3cu5_A 39 INAIQIALK---HPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSGY 86 (141)
T ss_dssp HHHHHHHTT---SCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECCS
T ss_pred HHHHHHHhc---CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeCC
Confidence 344444444 6799999997654 344444333 5777776543
No 422
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=22.99 E-value=63 Score=28.84 Aligned_cols=31 Identities=19% Similarity=0.222 Sum_probs=23.9
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
|||.|+-.|..| ..+|..|.++||+|+++..
T Consensus 1 m~I~iiG~G~mG-----~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMG-----SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEEc
Confidence 478887666555 3568889999999999876
No 423
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=22.99 E-value=99 Score=26.06 Aligned_cols=33 Identities=21% Similarity=0.253 Sum_probs=22.7
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
++++++.++. -+ =.+++++|+++|++|+++.-.
T Consensus 6 k~vlVTGas~-gi--G~~ia~~l~~~G~~V~~~~r~ 38 (245)
T 1uls_A 6 KAVLITGAAH-GI--GRATLELFAKEGARLVACDIE 38 (245)
T ss_dssp CEEEEESTTS-HH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCC-HH--HHHHHHHHHHCCCEEEEEeCC
Confidence 4556665543 22 246889999999999987643
No 424
>1r8j_A KAIA; circadian clock protein; 2.03A {Synechococcus elongatus pcc 7942} SCOP: a.186.1.1 c.23.1.5 PDB: 1m2e_A 1m2f_A
Probab=22.97 E-value=2.9e+02 Score=23.78 Aligned_cols=70 Identities=17% Similarity=0.172 Sum_probs=48.2
Q ss_pred cchhhhHHhhhhhhc-eeEEeeccC---CCccCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhhcCCChHHHHHHHHH
Q 012744 375 ADQFMNTTYICDVWK-VGLRLERNQ---SGIIGREEIKNKVDQVLGDQNFKARALKLKEKALSSVREGGSSNKAIQNFVQ 450 (457)
Q Consensus 375 ~DQ~~na~~v~~~lG-~g~~l~~~~---~~~~~~~~l~~~i~~~l~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 450 (457)
.-|..-+.++.|+|| +|+-...++ -..+++++=.+-++.+-. +|| +.+-++.+.....++++|+||+
T Consensus 156 ~qQ~rL~~KLkERLGYLGVYYKR~p~~F~rnl~~~ErqeLl~~Lk~--~YR-------~IlL~YF~~d~~~Nq~ID~FVN 226 (289)
T 1r8j_A 156 SQQRDLAQRLQERLGYLGVYYKRDPDRFLRNLPAYESQKLHQAMQT--SYR-------EIVLSYFSPNSNLNQSIDNFVN 226 (289)
T ss_dssp GHHHHHHHHHHHHHEEEEEEECCCGGGSTTTSCHHHHHHHHHHHHH--HHH-------HHHHHHTSTTCCHHHHHHHHHH
T ss_pred hHHhhHHHHHHHHhcccceeeeeCHHHHHHhCCHHHHHHHHHHHHH--HHH-------HHHHHHhCCchHHHHHHHHHHH
Confidence 346677888988888 666665432 123677666666666542 344 5667788888999999999998
Q ss_pred HHh
Q 012744 451 SIK 453 (457)
Q Consensus 451 ~~~ 453 (457)
..+
T Consensus 227 ~aF 229 (289)
T 1r8j_A 227 MAF 229 (289)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 425
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=22.92 E-value=87 Score=26.62 Aligned_cols=34 Identities=21% Similarity=0.387 Sum_probs=24.1
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
.|+++++.++.| + =.++|++|+++|++|+++.-.
T Consensus 9 ~k~vlITGas~g-I--G~~~a~~l~~~G~~V~~~~r~ 42 (261)
T 3n74_A 9 GKVALITGAGSG-F--GEGMAKRFAKGGAKVVIVDRD 42 (261)
T ss_dssp TCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEcCC
Confidence 356666665542 2 257899999999999888654
No 426
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=22.80 E-value=83 Score=26.32 Aligned_cols=37 Identities=19% Similarity=0.099 Sum_probs=27.6
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
..+++..|..|+..-+..+++.|.++|++|..+-.+.
T Consensus 27 ~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G 63 (286)
T 3qit_A 27 PVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFG 63 (286)
T ss_dssp CEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTT
T ss_pred CEEEEECCCCcccchHHHHHHHhhhcCeEEEEECCCC
Confidence 3455555666666667889999999999998876544
No 427
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=22.79 E-value=91 Score=22.37 Aligned_cols=33 Identities=18% Similarity=0.277 Sum_probs=21.6
Q ss_pred CCeeEEEecCCcc--hHHHHHHHc-----CCceEEEechh
Q 012744 106 EKTACLIADGAAG--WAIEVAEKM-----KLRRAVVVITS 138 (457)
Q Consensus 106 ~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 138 (457)
.+||+||.|...+ .+..+.+.+ .+|++.++...
T Consensus 46 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (124)
T 1srr_A 46 ERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYG 85 (124)
T ss_dssp HCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccC
Confidence 5799999997554 344444332 58888876644
No 428
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=22.78 E-value=49 Score=29.17 Aligned_cols=46 Identities=15% Similarity=0.105 Sum_probs=32.9
Q ss_pred CCCEEEEEcCCCCc----ChHHHHHHHHHHHhCCCeEEEEeCCcchhHHH
Q 012744 2 SSPHVVVIPNPEQG----HVIPLLELSQNLAKHGLRITFVNSEYNHKRVL 47 (457)
Q Consensus 2 ~~~~vl~~~~~~~G----H~~p~~~la~~L~~~Gh~Vt~~~~~~~~~~~~ 47 (457)
++|||+++..|..+ .......++++|.++||+|..+........+.
T Consensus 2 ~~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~~~~ 51 (307)
T 3r5x_A 2 NAMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEKMDLIE 51 (307)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECSSGGGHHH
T ss_pred CCcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEcccCchhHHH
Confidence 46889888766331 23456789999999999999998765444333
No 429
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=22.71 E-value=95 Score=27.97 Aligned_cols=35 Identities=9% Similarity=0.164 Sum_probs=23.1
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHh--CCCeEEEEeCCc
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAK--HGLRITFVNSEY 41 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~--~Gh~Vt~~~~~~ 41 (457)
.++|+++ |+.|-+- ..|+++|.+ +||+|+.+.-..
T Consensus 10 ~~~vlVT--GatG~IG--~~l~~~L~~~~~g~~V~~~~r~~ 46 (362)
T 3sxp_A 10 NQTILIT--GGAGFVG--SNLAFHFQENHPKAKVVVLDKFR 46 (362)
T ss_dssp TCEEEEE--TTTSHHH--HHHHHHHHHHCTTSEEEEEECCC
T ss_pred CCEEEEE--CCCCHHH--HHHHHHHHhhCCCCeEEEEECCC
Confidence 3455444 3344443 367889999 999999987533
No 430
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=22.68 E-value=24 Score=33.64 Aligned_cols=35 Identities=20% Similarity=0.326 Sum_probs=27.9
Q ss_pred CCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 2 SSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 2 ~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
+.|||+++-.|-.| ..||+.|.+.||+|+++-...
T Consensus 2 ~~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 2 NAMKIIILGAGQVG-----GTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESCH
T ss_pred CcCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 46888888776555 358999999999999987644
No 431
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=22.63 E-value=2.4e+02 Score=24.96 Aligned_cols=109 Identities=12% Similarity=0.047 Sum_probs=53.3
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHhhc-CCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCccce
Q 012744 271 VIYVAFGSHTVLEQNQFQELALGLEIC-NRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSISCF 349 (457)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~~~ 349 (457)
+.+|..|.++. ..+.++... +..++.+...+ ...-+.+.++.. + ..-+-...+++..++++++
T Consensus 8 igiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~------~~~~~~~~~~~~--~-~~~~~~~~~ll~~~~~D~V 71 (330)
T 3e9m_A 8 YGIMSTAQIVP-------RFVAGLRESAQAEVRGIASRR------LENAQKMAKELA--I-PVAYGSYEELCKDETIDII 71 (330)
T ss_dssp EEECSCCTTHH-------HHHHHHHHSSSEEEEEEBCSS------SHHHHHHHHHTT--C-CCCBSSHHHHHHCTTCSEE
T ss_pred EEEECchHHHH-------HHHHHHHhCCCcEEEEEEeCC------HHHHHHHHHHcC--C-CceeCCHHHHhcCCCCCEE
Confidence 67777777642 345556554 45555454432 000111221111 1 1123455678875555546
Q ss_pred eeccCcc----hhhhhhhcCCceec-ccccc--chhhhHHhhhhhhceeEEee
Q 012744 350 MSHCGWN----STTEGVSNGVPFLC-WPFFA--DQFMNTTYICDVWKVGLRLE 395 (457)
Q Consensus 350 I~HgG~~----s~~eal~~GvP~l~-~P~~~--DQ~~na~~v~~~lG~g~~l~ 395 (457)
+----.. .+.+++.+|++++| -|+.. ++-.-.....++.|+-+.+.
T Consensus 72 ~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~ 124 (330)
T 3e9m_A 72 YIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEA 124 (330)
T ss_dssp EECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred EEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 6433333 36778999999876 35443 33333222222236555543
No 432
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=22.63 E-value=86 Score=26.81 Aligned_cols=35 Identities=14% Similarity=0.402 Sum_probs=25.1
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|+ |.++++.++.| + =.++|+.|++.|++|.++...
T Consensus 1 Mn--K~vlVTGas~G-I--G~aia~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 1 MN--RGVIVTGGGHG-I--GKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp -C--CEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CC--CEEEEecCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 55 45677777664 2 257899999999999887653
No 433
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=22.61 E-value=96 Score=26.74 Aligned_cols=36 Identities=8% Similarity=0.027 Sum_probs=25.2
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
+.++++++.++. -+- .++|++|+++|++|+.+.-..
T Consensus 4 ~~k~vlVTGas~-gIG--~~~a~~l~~~G~~V~~~~r~~ 39 (281)
T 3m1a_A 4 SAKVWLVTGASS-GFG--RAIAEAAVAAGDTVIGTARRT 39 (281)
T ss_dssp CCCEEEETTTTS-HHH--HHHHHHHHHTTCEEEEEESSG
T ss_pred CCcEEEEECCCC-hHH--HHHHHHHHHCCCEEEEEeCCH
Confidence 346677766654 232 368899999999999887543
No 434
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=22.61 E-value=89 Score=26.19 Aligned_cols=31 Identities=10% Similarity=0.181 Sum_probs=21.8
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEe
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVN 38 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~ 38 (457)
+.++++.++ |-+- ..++++|.++|++|+++.
T Consensus 6 ~~vlItGas-ggiG--~~~a~~l~~~G~~V~~~~ 36 (247)
T 2hq1_A 6 KTAIVTGSS-RGLG--KAIAWKLGNMGANIVLNG 36 (247)
T ss_dssp CEEEESSCS-SHHH--HHHHHHHHHTTCEEEEEE
T ss_pred cEEEEECCC-chHH--HHHHHHHHHCCCEEEEEc
Confidence 455555443 3333 478999999999999884
No 435
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=22.56 E-value=92 Score=27.07 Aligned_cols=36 Identities=17% Similarity=0.346 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
+.|+++++.++.| + =.++|++|+++|++|.++.-..
T Consensus 8 ~~k~vlVTGas~G-I--G~aia~~l~~~G~~V~~~~r~~ 43 (285)
T 3sc4_A 8 RGKTMFISGGSRG-I--GLAIAKRVAADGANVALVAKSA 43 (285)
T ss_dssp TTCEEEEESCSSH-H--HHHHHHHHHTTTCEEEEEESCC
T ss_pred CCCEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEECCh
Confidence 3466777766653 2 2578999999999999887543
No 436
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=22.51 E-value=1e+02 Score=26.27 Aligned_cols=33 Identities=18% Similarity=0.447 Sum_probs=24.0
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
++++++.++.| + =.++|++|+++|++|.++.-.
T Consensus 30 k~vlITGas~g-I--G~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 30 QVAVVTGASRG-I--GAAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp CEEEESSTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEECC
Confidence 56777766543 2 357799999999999887653
No 437
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=22.51 E-value=1e+02 Score=26.25 Aligned_cols=35 Identities=23% Similarity=0.336 Sum_probs=24.8
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
+.|+++++.++.| + =.++|+.|+++|++|+++.-.
T Consensus 3 ~~k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~r~ 37 (260)
T 1x1t_A 3 KGKVAVVTGSTSG-I--GLGIATALAAQGADIVLNGFG 37 (260)
T ss_dssp TTCEEEETTCSSH-H--HHHHHHHHHHTTCEEEEECCS
T ss_pred CCCEEEEeCCCcH-H--HHHHHHHHHHcCCEEEEEeCC
Confidence 3456677766543 2 257899999999999887643
No 438
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=22.43 E-value=1e+02 Score=26.74 Aligned_cols=35 Identities=17% Similarity=0.335 Sum_probs=25.0
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
+.|+++++.++.| + =.++|++|+++|++|+++.-.
T Consensus 4 ~gk~~lVTGas~G-I--G~aia~~la~~G~~V~~~~r~ 38 (281)
T 3zv4_A 4 TGEVALITGGASG-L--GRALVDRFVAEGARVAVLDKS 38 (281)
T ss_dssp TTCEEEEETCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCcH-H--HHHHHHHHHHCcCEEEEEeCC
Confidence 3456777766543 2 257899999999999988643
No 439
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=22.39 E-value=98 Score=26.06 Aligned_cols=32 Identities=13% Similarity=0.268 Sum_probs=22.9
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
|+++++.++. -+- .+++++|+++|++|+++.-
T Consensus 7 k~vlVTGas~-gIG--~~ia~~l~~~G~~V~~~~r 38 (246)
T 2ag5_A 7 KVIILTAAAQ-GIG--QAAALAFAREGAKVIATDI 38 (246)
T ss_dssp CEEEESSTTS-HHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCc-HHH--HHHHHHHHHCCCEEEEEEC
Confidence 5666665543 222 5788999999999998864
No 440
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=22.37 E-value=94 Score=29.66 Aligned_cols=35 Identities=9% Similarity=0.028 Sum_probs=28.4
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhC-CC-eEEEEeCCcc
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKH-GL-RITFVNSEYN 42 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~-Gh-~Vt~~~~~~~ 42 (457)
.+||.|+-.|..| .++|..|+++ || +|+++.....
T Consensus 18 ~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECChh
Confidence 5789999887777 5788999999 99 9999875443
No 441
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=22.36 E-value=1.6e+02 Score=23.69 Aligned_cols=88 Identities=16% Similarity=0.043 Sum_probs=56.7
Q ss_pred ChHHHHHHHHHHHhC--CCeEEEEeCCcchhHHHh-hhcCCCCCCCCeEEEecCCCCCCCCCcchHHHHHHHHHHhcchH
Q 012744 16 HVIPLLELSQNLAKH--GLRITFVNSEYNHKRVLE-SLEGKNYIGEQIHLVSIPDGMEPWDDRSDMRKLLEKRLQVMPGK 92 (457)
Q Consensus 16 H~~p~~~la~~L~~~--Gh~Vt~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (457)
+=.-++.+|+.|.+. ||++. .+......+.+ . |+....+..+-.. .+++
T Consensus 38 dK~~lv~~ak~~~~lL~Gf~L~--AT~gTa~~L~e~~---------Gl~v~~v~k~~eG-----------------G~pq 89 (178)
T 1vmd_A 38 RKRDLLEWVSFNLGTLSKHELY--ATGTTGALLQEKL---------GLKVHRLKSGPLG-----------------GDQQ 89 (178)
T ss_dssp GHHHHHHHHHHSHHHHTTSEEE--ECHHHHHHHHHHH---------CCCCEECSCGGGT-----------------HHHH
T ss_pred hHHHHHHHHHHHHHHhcCCEEE--EchHHHHHHHHHh---------CceeEEEeecCCC-----------------CCch
Confidence 345689999999998 99654 56677777777 5 6665554321100 1234
Q ss_pred HHHHHHHHhcCCCCCeeEEEecCC--cc--------hHHHHHHHcCCceEEEech
Q 012744 93 LEGLIEEIHGREGEKTACLIADGA--AG--------WAIEVAEKMKLRRAVVVIT 137 (457)
Q Consensus 93 ~~~~~~~l~~~~~~~~D~vv~D~~--~~--------~~~~~A~~lgiP~v~~~~~ 137 (457)
+-+++.. .+.|+||.-.. .. .-..+|-..+||++.-..+
T Consensus 90 I~d~I~~------geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~Tnlat 138 (178)
T 1vmd_A 90 IGAMIAE------GKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAITRST 138 (178)
T ss_dssp HHHHHHT------TSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEESSHHH
T ss_pred HHHHHHC------CCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEeCHHH
Confidence 4444444 88999998544 11 3467889999999985433
No 442
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=22.33 E-value=71 Score=27.39 Aligned_cols=34 Identities=24% Similarity=0.278 Sum_probs=24.8
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
|+++++.++.| + =.++|++|+++|++|+++.-..
T Consensus 28 k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r~~ 61 (260)
T 3gem_A 28 APILITGASQR-V--GLHCALRLLEHGHRVIISYRTE 61 (260)
T ss_dssp CCEEESSTTSH-H--HHHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEeCCh
Confidence 56667666543 2 2578999999999999987544
No 443
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=22.31 E-value=1e+02 Score=25.97 Aligned_cols=32 Identities=16% Similarity=0.172 Sum_probs=22.3
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
|+++++.++. -+ =.+++++|+++|++|+++.-
T Consensus 2 k~vlVTGas~-gI--G~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 2 SIIVISGCAT-GI--GAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CEEEEETTTS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCC-HH--HHHHHHHHHHCCCEEEEEeC
Confidence 4556665543 22 24689999999999998764
No 444
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=22.19 E-value=88 Score=24.80 Aligned_cols=43 Identities=12% Similarity=0.029 Sum_probs=26.9
Q ss_pred HHHHHHHHhcCCCCCeeEEEecCCcc--hHHHHHHH-----cCCceEEEechh
Q 012744 93 LEGLIEEIHGREGEKTACLIADGAAG--WAIEVAEK-----MKLRRAVVVITS 138 (457)
Q Consensus 93 ~~~~~~~l~~~~~~~~D~vv~D~~~~--~~~~~A~~-----lgiP~v~~~~~~ 138 (457)
..+.++.+.. .+||+||.|...+ .+..+++. -.+|++.++...
T Consensus 40 ~~~al~~~~~---~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~ 89 (184)
T 3rqi_A 40 KDEALKLAGA---EKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYA 89 (184)
T ss_dssp HHHHHHHHTT---SCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSC
T ss_pred HHHHHHHHhh---CCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 3444555544 7899999997655 34444433 258888876654
No 445
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=22.17 E-value=89 Score=27.29 Aligned_cols=31 Identities=26% Similarity=0.270 Sum_probs=23.9
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
++|.|+-.|..|. .+|+.|.++||+|+++..
T Consensus 6 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 36 (299)
T 1vpd_A 6 MKVGFIGLGIMGK-----PMSKNLLKAGYSLVVSDR 36 (299)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred ceEEEECchHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 6899887766664 468889899999987654
No 446
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=22.15 E-value=76 Score=26.65 Aligned_cols=37 Identities=16% Similarity=0.140 Sum_probs=28.8
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
..+++..|..|+..-+..+++.|.++|+.|..+-.+.
T Consensus 41 ~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~G 77 (270)
T 3rm3_A 41 VGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKG 77 (270)
T ss_dssp EEEEEECCTTCCGGGTHHHHHHHHHTTCEEEECCCTT
T ss_pred eEEEEECCCCCChhHHHHHHHHHHHCCCEEEEeCCCC
Confidence 4566667777777778899999999999988765543
No 447
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=22.08 E-value=1.1e+02 Score=27.90 Aligned_cols=35 Identities=11% Similarity=0.150 Sum_probs=24.3
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEc
Q 012744 270 SVIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVR 306 (457)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~ 306 (457)
.+++++.|+.+ ....+..++++|.+.|+++.+.+.
T Consensus 6 ~il~~~~~~~G--hv~~~~~La~~L~~~GheV~v~~~ 40 (402)
T 3ia7_A 6 HILFANVQGHG--HVYPSLGLVSELARRGHRITYVTT 40 (402)
T ss_dssp EEEEECCSSHH--HHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEEeCCCCc--ccccHHHHHHHHHhCCCEEEEEcC
Confidence 37777777543 233456688888888998888775
No 448
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=22.07 E-value=1.1e+02 Score=21.68 Aligned_cols=33 Identities=18% Similarity=0.136 Sum_probs=21.9
Q ss_pred CCeeEEEecCCcc--hHHHHHH----HcCCceEEEechh
Q 012744 106 EKTACLIADGAAG--WAIEVAE----KMKLRRAVVVITS 138 (457)
Q Consensus 106 ~~~D~vv~D~~~~--~~~~~A~----~lgiP~v~~~~~~ 138 (457)
.+||+||.|...+ .+..+.+ .-.+|.+.++...
T Consensus 44 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 82 (120)
T 2a9o_A 44 EQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKD 82 (120)
T ss_dssp HCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCC
T ss_pred CCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 5799999997554 3444333 3468888876654
No 449
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=22.03 E-value=71 Score=26.59 Aligned_cols=34 Identities=18% Similarity=0.241 Sum_probs=23.0
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
||+++++.++.| + =.++|++|+++|++|+++.-.
T Consensus 1 Mk~vlVTGas~g-I--G~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGASSG-L--GAELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTTSH-H--HHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEecCCch-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 355666666542 2 257899999999999888653
No 450
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=22.01 E-value=2.8e+02 Score=24.78 Aligned_cols=109 Identities=15% Similarity=0.062 Sum_probs=55.1
Q ss_pred eEEEEEeCCcccCCHHHHHHHHHHHhhc--CCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecCCCchhhccCCCcc
Q 012744 270 SVIYVAFGSHTVLEQNQFQELALGLEIC--NRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISWSPQQKVLTHPSIS 347 (457)
Q Consensus 270 ~~v~vs~Gs~~~~~~~~~~~~~~a~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~pq~~ll~~~~~~ 347 (457)
.+.+|..|.++. ..+.++... +.+++.+...+ ...-+.+.++. ++ ..+-...+++..++++
T Consensus 15 rvgiiG~G~~g~-------~~~~~l~~~~~~~~lvav~d~~------~~~~~~~~~~~--~~--~~~~~~~~ll~~~~~D 77 (354)
T 3q2i_A 15 RFALVGCGRIAN-------NHFGALEKHADRAELIDVCDID------PAALKAAVERT--GA--RGHASLTDMLAQTDAD 77 (354)
T ss_dssp EEEEECCSTTHH-------HHHHHHHHTTTTEEEEEEECSS------HHHHHHHHHHH--CC--EEESCHHHHHHHCCCS
T ss_pred eEEEEcCcHHHH-------HHHHHHHhCCCCeEEEEEEcCC------HHHHHHHHHHc--CC--ceeCCHHHHhcCCCCC
Confidence 488888887652 344555544 55666565433 00001122111 12 3344567788755544
Q ss_pred ceeeccC----cchhhhhhhcCCceec-ccccc--chhhhHHhhhhhhceeEEee
Q 012744 348 CFMSHCG----WNSTTEGVSNGVPFLC-WPFFA--DQFMNTTYICDVWKVGLRLE 395 (457)
Q Consensus 348 ~~I~HgG----~~s~~eal~~GvP~l~-~P~~~--DQ~~na~~v~~~lG~g~~l~ 395 (457)
+++---- ..-+.+++.+|+++++ -|+.. ++-.-.....++.|+-+.+.
T Consensus 78 ~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~ 132 (354)
T 3q2i_A 78 IVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVV 132 (354)
T ss_dssp EEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred EEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEE
Confidence 4553222 2346778999999887 36543 33322222222236555543
No 451
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=21.99 E-value=3.1e+02 Score=21.99 Aligned_cols=135 Identities=9% Similarity=0.034 Sum_probs=69.8
Q ss_pred EEEEEeCCcccCCHHHHHHHHHHHhhcCCcEEEEEcCCCCCCCcCCCchhHHHHhcCCceeecC----CCchhhccCCCc
Q 012744 271 VIYVAFGSHTVLEQNQFQELALGLEICNRSFLWVVRPDITNDANDAYPEGFRERVAARGQMISW----SPQQKVLTHPSI 346 (457)
Q Consensus 271 ~v~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~----~pq~~ll~~~~~ 346 (457)
+++.-.||.... ....+++.+.+.+..+-++.... ...-+...-.+...++ ..--| +.+-++-..+|+
T Consensus 5 IllgvTGs~aa~---k~~~l~~~L~~~g~~V~vv~T~~----A~~fi~~~~l~~l~~~-~~d~~~~~~~~hi~l~~~aD~ 76 (181)
T 1g63_A 5 LLICATASINVI---NINHYIVELKQHFDEVNILFSPS----SKNFINTDVLKLFCDN-LYDEIKDPLLNHINIVENHEY 76 (181)
T ss_dssp EEEEECSCGGGG---GHHHHHHHHTTTSSCEEEEECGG----GGGTSCGGGGGGTSSC-EECTTTCTTCCHHHHHHTCSE
T ss_pred EEEEEECHHHHH---HHHHHHHHHHHCCCEEEEEEchh----HHHHHHHHHHHHHhCC-cccccCCCCCccccccccCCE
Confidence 666666776543 34556666766677665554432 1112222222233444 22222 223444555553
Q ss_pred cceeeccCcchhh-------------hhhhcCCceecccccc----ch---hhhHHhhhhhhceeEEeeccC--------
Q 012744 347 SCFMSHCGWNSTT-------------EGVSNGVPFLCWPFFA----DQ---FMNTTYICDVWKVGLRLERNQ-------- 398 (457)
Q Consensus 347 ~~~I~HgG~~s~~-------------eal~~GvP~l~~P~~~----DQ---~~na~~v~~~lG~g~~l~~~~-------- 398 (457)
.+|.-|-+||+. -++..++|+++.|-.. +. ..|-.++.+ +|+-+.-....
T Consensus 77 -~vIaPaTantlAKiA~GiaDnllt~~~la~~~pvvlaPamn~~m~~~p~~~~Nl~~L~~-~G~~iv~p~~g~~f~lacg 154 (181)
T 1g63_A 77 -ILVLPASANTINKIANGICDNLLTTVCLTGYQKLFIFPNMNIRMWGNPFLQKNIDLLKN-NDVKVYSPDMNKSFEISSG 154 (181)
T ss_dssp -EEEEEECHHHHHHHHTTCCCSHHHHHHHHTGGGEEEEECCCHHHHTCHHHHHHHHHHHT-TTCEECCCEECC-------
T ss_pred -EEEecCCHHHHHHHHccccCcHHHHHHHHcCCCEEEEeCCChhhcCCHHHHHHHHHHHH-CCCEEECCCCCcccccccC
Confidence 477777777653 2367899999999432 21 346667777 47644322211
Q ss_pred C-----CccCHHHHHHHHHHHh
Q 012744 399 S-----GIIGREEIKNKVDQVL 415 (457)
Q Consensus 399 ~-----~~~~~~~l~~~i~~~l 415 (457)
+ .-.+.++|.+.+.+.+
T Consensus 155 ~~~g~g~~~~~~~iv~~v~~~l 176 (181)
T 1g63_A 155 RYKNNITMPNIENVLNFVLNNE 176 (181)
T ss_dssp ---CCEECCCHHHHHHHHHC--
T ss_pred CccCCcCCCCHHHHHHHHHHHh
Confidence 1 1235677777776655
No 452
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=21.95 E-value=1.4e+02 Score=23.98 Aligned_cols=37 Identities=16% Similarity=0.239 Sum_probs=25.1
Q ss_pred CEEEEEcCC-----CCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 4 PHVVVIPNP-----EQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 4 ~~vl~~~~~-----~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
..++++..| +...-..+..+++.|+++|+.|..+..+
T Consensus 37 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 78 (220)
T 2fuk_A 37 PVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFR 78 (220)
T ss_dssp SEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCT
T ss_pred cCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecC
Confidence 345555544 3334445788999999999998887653
No 453
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=21.89 E-value=62 Score=29.52 Aligned_cols=34 Identities=15% Similarity=0.156 Sum_probs=24.7
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
|++.+|+++-.|-.| +.+|..|+++|++|+++-.
T Consensus 9 m~~~dVvIVGaG~aG-----l~~A~~L~~~G~~v~viE~ 42 (379)
T 3alj_A 9 GKTRRAEVAGGGFAG-----LTAAIALKQNGWDVRLHEK 42 (379)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCCeEEEECCCHHH-----HHHHHHHHHCCCCEEEEec
Confidence 345677777666445 6778889999999999864
No 454
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=21.83 E-value=88 Score=27.03 Aligned_cols=33 Identities=9% Similarity=0.157 Sum_probs=23.6
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|+++++.++. -+- .++|++|+++|++|+++.-.
T Consensus 22 k~vlVTGas~-gIG--~aia~~La~~G~~V~~~~r~ 54 (272)
T 2nwq_A 22 STLFITGATS-GFG--EACARRFAEAGWSLVLTGRR 54 (272)
T ss_dssp CEEEESSTTT-SSH--HHHHHHHHHTTCEEEEEESC
T ss_pred cEEEEeCCCC-HHH--HHHHHHHHHCCCEEEEEECC
Confidence 5666665544 333 46899999999999987653
No 455
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=21.83 E-value=1.5e+02 Score=24.03 Aligned_cols=37 Identities=11% Similarity=0.038 Sum_probs=26.8
Q ss_pred CCEEEEEcCCCCcC----hHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 3 SPHVVVIPNPEQGH----VIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 3 ~~~vl~~~~~~~GH----~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
+++|.+++... +. ..-...|++.|+++||.|+.-..+
T Consensus 13 ~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG~ 53 (189)
T 3sbx_A 13 RWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGGH 53 (189)
T ss_dssp CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBC
T ss_pred CeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 46888887655 32 345778889999999988776544
No 456
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=21.68 E-value=69 Score=29.02 Aligned_cols=36 Identities=11% Similarity=0.199 Sum_probs=24.7
Q ss_pred CCCEEEEEcCCCCcChHHHHHHHHHHHhC-CCeEEEEeCCc
Q 012744 2 SSPHVVVIPNPEQGHVIPLLELSQNLAKH-GLRITFVNSEY 41 (457)
Q Consensus 2 ~~~~vl~~~~~~~GH~~p~~~la~~L~~~-Gh~Vt~~~~~~ 41 (457)
+.++|+++ |+.|.+- ..|+++|.++ ||+|+.+.-..
T Consensus 23 ~~~~vlVt--GatG~iG--~~l~~~L~~~~g~~V~~~~r~~ 59 (372)
T 3slg_A 23 KAKKVLIL--GVNGFIG--HHLSKRILETTDWEVFGMDMQT 59 (372)
T ss_dssp CCCEEEEE--SCSSHHH--HHHHHHHHHHSSCEEEEEESCC
T ss_pred CCCEEEEE--CCCChHH--HHHHHHHHhCCCCEEEEEeCCh
Confidence 34565554 4555555 4678899888 99999998543
No 457
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=21.50 E-value=91 Score=25.68 Aligned_cols=33 Identities=21% Similarity=0.176 Sum_probs=26.7
Q ss_pred EEEEcC-CCCcChHHHHHHHHHHHhCCCeEEEEe
Q 012744 6 VVVIPN-PEQGHVIPLLELSQNLAKHGLRITFVN 38 (457)
Q Consensus 6 vl~~~~-~~~GH~~p~~~la~~L~~~Gh~Vt~~~ 38 (457)
|++... |+.|=-.-...||..|+++|++|.++-
T Consensus 4 I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~d 37 (224)
T 1byi_A 4 YFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEc
Confidence 444443 567889999999999999999999863
No 458
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=21.48 E-value=86 Score=27.80 Aligned_cols=39 Identities=8% Similarity=0.244 Sum_probs=28.4
Q ss_pred CCC-CEEEEEcCCCCcChH-HHHHHHHHHHhCCCeEEEEeC
Q 012744 1 MSS-PHVVVIPNPEQGHVI-PLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 1 m~~-~~vl~~~~~~~GH~~-p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
|.. +|++++..+..++.. ....+.+.|.++|++|.+..+
T Consensus 1 m~~m~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~ 41 (307)
T 1u0t_A 1 MTAHRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSA 41 (307)
T ss_dssp ----CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-
T ss_pred CCCCCEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecc
Confidence 554 479999998887654 477889999999999887644
No 459
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=21.44 E-value=77 Score=26.94 Aligned_cols=32 Identities=9% Similarity=0.299 Sum_probs=22.7
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
+.++++.++ |-+- ..++++|+++|++|+++.-
T Consensus 15 k~vlITGas-ggiG--~~~a~~l~~~G~~V~~~~r 46 (265)
T 1h5q_A 15 KTIIVTGGN-RGIG--LAFTRAVAAAGANVAVIYR 46 (265)
T ss_dssp EEEEEETTT-SHHH--HHHHHHHHHTTEEEEEEES
T ss_pred CEEEEECCC-chHH--HHHHHHHHHCCCeEEEEeC
Confidence 455555443 4333 5789999999999999875
No 460
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=21.41 E-value=57 Score=28.75 Aligned_cols=32 Identities=28% Similarity=0.364 Sum_probs=25.2
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
++|.|+-.|..|+ .+|..|+++||+|+++...
T Consensus 16 ~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 4788887776665 5788999999999987654
No 461
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=21.33 E-value=1e+02 Score=26.55 Aligned_cols=34 Identities=18% Similarity=0.208 Sum_probs=25.2
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
.|+++++.++.| + =.++|++|+++|++|+++.-.
T Consensus 10 ~k~~lVTGas~g-I--G~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 10 GKTALITGGARG-M--GRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp TCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCCCch-H--HHHHHHHHHHCCCeEEEEeCC
Confidence 367777776653 2 257899999999999988653
No 462
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=21.28 E-value=95 Score=26.54 Aligned_cols=34 Identities=21% Similarity=0.247 Sum_probs=24.3
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
.|+++++.++. -+- .++|++|+++|++|+++.-.
T Consensus 28 ~k~vlVTGas~-gIG--~aia~~l~~~G~~V~~~~r~ 61 (260)
T 3un1_A 28 QKVVVITGASQ-GIG--AGLVRAYRDRNYRVVATSRS 61 (260)
T ss_dssp CCEEEESSCSS-HHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCC-HHH--HHHHHHHHHCCCEEEEEeCC
Confidence 45667766554 222 47899999999999988653
No 463
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=21.28 E-value=96 Score=23.62 Aligned_cols=28 Identities=4% Similarity=-0.065 Sum_probs=15.0
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHH
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLA 28 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~ 28 (457)
|.+++|+|++.+=..-=--.-+|++.+.
T Consensus 1 M~~~~VLFVC~gN~cRSpmAEai~~~~~ 28 (139)
T 1jl3_A 1 MENKIIYFLCTGNSCRSQMAEGWAKQYL 28 (139)
T ss_dssp --CEEEEEEESSSSSHHHHHHHHHHHHS
T ss_pred CCCCeEEEEcCCchHHHHHHHHHHHHhC
Confidence 6667899998774432222334555554
No 464
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=21.28 E-value=1.6e+02 Score=22.12 Aligned_cols=42 Identities=10% Similarity=0.063 Sum_probs=25.5
Q ss_pred HHHHHHHhcCCCCCeeEEEecCCcc--hHHHHHHHc-----CCceEEEechh
Q 012744 94 EGLIEEIHGREGEKTACLIADGAAG--WAIEVAEKM-----KLRRAVVVITS 138 (457)
Q Consensus 94 ~~~~~~l~~~~~~~~D~vv~D~~~~--~~~~~A~~l-----giP~v~~~~~~ 138 (457)
.+.++.+.. ..||+||.|.... .+..+.+.+ .+|++.++...
T Consensus 41 ~~a~~~l~~---~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (153)
T 3cz5_A 41 GEAYRLYRE---TTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQ 89 (153)
T ss_dssp HHHHHHHHT---TCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred HHHHHHHhc---CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCC
Confidence 344444444 6899999997554 333333332 58888876554
No 465
>3giu_A Pyrrolidone-carboxylate peptidase; IDP00836, hydrolase, PROT thiol protease, structural genomics; HET: MSE PG4; 1.25A {Staphylococcus aureus subsp} SCOP: c.56.4.0
Probab=21.28 E-value=75 Score=26.56 Aligned_cols=29 Identities=17% Similarity=0.202 Sum_probs=21.3
Q ss_pred CCCCEEEEEcCCCCc--ChHHHHHHHHHHHh
Q 012744 1 MSSPHVVVIPNPEQG--HVIPLLELSQNLAK 29 (457)
Q Consensus 1 m~~~~vl~~~~~~~G--H~~p~~~la~~L~~ 29 (457)
|++|||++.-|+-.| .+||...++++|.+
T Consensus 1 ~~~m~VLvTGF~PF~~~~~NPS~~~v~~L~~ 31 (215)
T 3giu_A 1 SNAMHILVTGFAPFDNQNINPSWEAVTQLED 31 (215)
T ss_dssp ---CEEEEEEECCCTTCSCCHHHHHHHHSCS
T ss_pred CCCcEEEEEecCCCCCCCCChHHHHHHHhcc
Confidence 678999988877553 47999999999965
No 466
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=21.25 E-value=70 Score=28.41 Aligned_cols=35 Identities=11% Similarity=0.175 Sum_probs=22.8
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCC--CeEEEEeC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHG--LRITFVNS 39 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~G--h~Vt~~~~ 39 (457)
|..|+|+++ |+.|-+- ..|+++|.++| |+|+.+.-
T Consensus 1 M~~m~vlVT--GatG~iG--~~l~~~L~~~g~~~~V~~~~r 37 (336)
T 2hun_A 1 MHSMKLLVT--GGMGFIG--SNFIRYILEKHPDWEVINIDK 37 (336)
T ss_dssp --CCEEEEE--TTTSHHH--HHHHHHHHHHCTTCEEEEEEC
T ss_pred CCCCeEEEE--CCCchHH--HHHHHHHHHhCCCCEEEEEec
Confidence 777886554 4445443 45788898886 89998864
No 467
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=21.25 E-value=1.1e+02 Score=26.80 Aligned_cols=35 Identities=17% Similarity=0.317 Sum_probs=29.0
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
.++++..|..|+..-+..+++.|+++|+.|..+-.
T Consensus 97 p~vv~~HG~~~~~~~~~~~~~~la~~G~~vv~~d~ 131 (306)
T 3vis_A 97 GAIAISPGYTGTQSSIAWLGERIASHGFVVIAIDT 131 (306)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHHTTTEEEEEECC
T ss_pred CEEEEeCCCcCCHHHHHHHHHHHHhCCCEEEEecC
Confidence 46677777788888899999999999998887654
No 468
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=21.22 E-value=3.2e+02 Score=29.41 Aligned_cols=37 Identities=16% Similarity=0.239 Sum_probs=24.2
Q ss_pred CCCC-EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012744 1 MSSP-HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYN 42 (457)
Q Consensus 1 m~~~-~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~ 42 (457)
|+.+ ||++. . .|. -.+.+++++.+.|++++.+.+...
T Consensus 1 M~~~kkVLIa-g--rGe--ia~riiraa~elGi~vVav~s~~d 38 (1150)
T 3hbl_A 1 MKQIKKLLVA-N--RGE--IAIRIFRAAAELDISTVAIYSNED 38 (1150)
T ss_dssp --CCCEEEEC-C--CHH--HHHHHHHHHHHTTCEEEEEECGGG
T ss_pred CCCCCEEEEE-C--CCH--HHHHHHHHHHHCCCEEEEEEcCCc
Confidence 5544 55553 2 232 456899999999999999876554
No 469
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=21.17 E-value=1.4e+02 Score=21.32 Aligned_cols=42 Identities=12% Similarity=0.146 Sum_probs=26.0
Q ss_pred HHHHHHHhcCCCCCeeEEEecCCcc--hHHHHHHHc-------CCceEEEechh
Q 012744 94 EGLIEEIHGREGEKTACLIADGAAG--WAIEVAEKM-------KLRRAVVVITS 138 (457)
Q Consensus 94 ~~~~~~l~~~~~~~~D~vv~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 138 (457)
.+.++.+.. .+||+||.|...+ .+..+.+.+ .+|.+.++...
T Consensus 39 ~~a~~~~~~---~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~~ 89 (128)
T 1jbe_A 39 VDALNKLQA---GGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAEA 89 (128)
T ss_dssp HHHHHHHTT---CCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESSC
T ss_pred HHHHHHHHh---cCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecCc
Confidence 444555544 6899999997654 344444433 46777776543
No 470
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=21.16 E-value=79 Score=29.91 Aligned_cols=35 Identities=20% Similarity=0.365 Sum_probs=24.8
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|+.++|+++ | .|-+-. .+++.|+++|++|+++.-.
T Consensus 1 M~~k~VlVi--G-aG~iG~--~ia~~L~~~G~~V~v~~R~ 35 (450)
T 1ff9_A 1 MATKSVLML--G-SGFVTR--PTLDVLTDSGIKVTVACRT 35 (450)
T ss_dssp -CCCEEEEE--C-CSTTHH--HHHHHHHTTTCEEEEEESS
T ss_pred CCCCEEEEE--C-CCHHHH--HHHHHHHhCcCEEEEEECC
Confidence 777788888 3 355443 4788899999998887653
No 471
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=21.11 E-value=1.1e+02 Score=25.41 Aligned_cols=36 Identities=14% Similarity=0.082 Sum_probs=23.7
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhC--CCeEEEEeCC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKH--GLRITFVNSE 40 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~--Gh~Vt~~~~~ 40 (457)
|+.++|+++ |+.|-+- ..++++|.++ ||+|+.+.-.
T Consensus 2 ~~~~~ilVt--GasG~iG--~~l~~~l~~~~~g~~V~~~~r~ 39 (253)
T 1xq6_A 2 ANLPTVLVT--GASGRTG--QIVYKKLKEGSDKFVAKGLVRS 39 (253)
T ss_dssp CSCCEEEEE--STTSHHH--HHHHHHHHHTTTTCEEEEEESC
T ss_pred CCCCEEEEE--cCCcHHH--HHHHHHHHhcCCCcEEEEEEcC
Confidence 344555544 4444443 4688999999 8999998754
No 472
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=21.11 E-value=1.1e+02 Score=26.40 Aligned_cols=34 Identities=15% Similarity=0.273 Sum_probs=24.8
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
.|+++++.++.| + =.++|++|+++|++|+++.-.
T Consensus 27 ~k~vlVTGas~G-I--G~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4dqx_A 27 QRVCIVTGGGSG-I--GRATAELFAKNGAYVVVADVN 60 (277)
T ss_dssp TCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 366777766653 2 257899999999999988753
No 473
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=21.11 E-value=1.5e+02 Score=20.88 Aligned_cols=33 Identities=12% Similarity=0.062 Sum_probs=21.7
Q ss_pred CCeeEEEecCCcc--hHHHHHHH-----cCCceEEEechh
Q 012744 106 EKTACLIADGAAG--WAIEVAEK-----MKLRRAVVVITS 138 (457)
Q Consensus 106 ~~~D~vv~D~~~~--~~~~~A~~-----lgiP~v~~~~~~ 138 (457)
..||++|.|...+ .+..+.+. -.+|++.++...
T Consensus 43 ~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 82 (121)
T 2pl1_A 43 HIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARE 82 (121)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCC
T ss_pred cCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecCC
Confidence 6899999997654 34443333 258888876544
No 474
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=21.09 E-value=93 Score=27.08 Aligned_cols=33 Identities=18% Similarity=0.382 Sum_probs=26.5
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
-|+++++.++.| + =.++|+.|++.|.+|.+..-
T Consensus 29 gKvalVTGas~G-I--G~aiA~~la~~Ga~V~i~~r 61 (273)
T 4fgs_A 29 AKIAVITGATSG-I--GLAAAKRFVAEGARVFITGR 61 (273)
T ss_dssp TCEEEEESCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCcCCH-H--HHHHHHHHHHCCCEEEEEEC
Confidence 378999988774 2 26789999999999988764
No 475
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=21.06 E-value=1.2e+02 Score=21.77 Aligned_cols=41 Identities=10% Similarity=0.033 Sum_probs=24.9
Q ss_pred HHHHHHHhcCCCCCeeEEEecCCcc--hHHHHHHHc-------CCceEEEech
Q 012744 94 EGLIEEIHGREGEKTACLIADGAAG--WAIEVAEKM-------KLRRAVVVIT 137 (457)
Q Consensus 94 ~~~~~~l~~~~~~~~D~vv~D~~~~--~~~~~A~~l-------giP~v~~~~~ 137 (457)
.+.++.+.. ..||+||.|...+ .+..+.+.+ .+|++.++..
T Consensus 41 ~~a~~~~~~---~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 90 (129)
T 1p6q_A 41 EQGMKIMAQ---NPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQ 90 (129)
T ss_dssp HHHHHHHHT---SCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCSC
T ss_pred HHHHHHHHc---CCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeCC
Confidence 444455444 6899999997654 445544433 4666666544
No 476
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=21.00 E-value=57 Score=31.23 Aligned_cols=35 Identities=20% Similarity=0.301 Sum_probs=27.1
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|.+++|.|+-.|..| ..+|..|+++||+|++....
T Consensus 2 ~~~~kIgiIGlG~MG-----~~lA~~L~~~G~~V~v~dr~ 36 (484)
T 4gwg_A 2 NAQADIALIGLAVMG-----QNLILNMNDHGFVVCAFNRT 36 (484)
T ss_dssp -CCBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred CCCCEEEEEChhHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 557789888777666 46799999999999987543
No 477
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=20.97 E-value=4.1e+02 Score=23.04 Aligned_cols=25 Identities=12% Similarity=0.039 Sum_probs=21.2
Q ss_pred CCHHHHHHHHHHHhhcCCcEEEEEc
Q 012744 282 LEQNQFQELALGLEICNRSFLWVVR 306 (457)
Q Consensus 282 ~~~~~~~~~~~a~~~~~~~~i~~~~ 306 (457)
++.+....+++++.+.|...|-...
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~ 47 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATS 47 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEcc
Confidence 5778889999999999999887764
No 478
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=20.96 E-value=65 Score=26.97 Aligned_cols=34 Identities=18% Similarity=0.387 Sum_probs=22.2
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCC--eEEEEeCC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGL--RITFVNSE 40 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh--~Vt~~~~~ 40 (457)
.++++++ |+.|-+- ..++++|.++|| +|+++.-.
T Consensus 18 ~~~vlVt--Gasg~iG--~~l~~~L~~~G~~~~V~~~~r~ 53 (242)
T 2bka_A 18 NKSVFIL--GASGETG--RVLLKEILEQGLFSKVTLIGRR 53 (242)
T ss_dssp CCEEEEE--CTTSHHH--HHHHHHHHHHTCCSEEEEEESS
T ss_pred CCeEEEE--CCCcHHH--HHHHHHHHcCCCCCEEEEEEcC
Confidence 3454443 3334333 467899999999 99998753
No 479
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=20.91 E-value=29 Score=31.47 Aligned_cols=36 Identities=19% Similarity=0.260 Sum_probs=27.1
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCC-------CeEEEEeCCc
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHG-------LRITFVNSEY 41 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~G-------h~Vt~~~~~~ 41 (457)
|.++||.|+-.|..|. .+|..|+++| |+|+++....
T Consensus 6 m~~mkI~iIG~G~mG~-----~~a~~l~~~g~~~~~~~~~V~~~~r~~ 48 (354)
T 1x0v_A 6 MASKKVCIVGSGNWGS-----AIAKIVGGNAAQLAQFDPRVTMWVFEE 48 (354)
T ss_dssp -CCEEEEEECCSHHHH-----HHHHHHHHHHHHCTTEEEEEEEECCCC
T ss_pred cCCCeEEEECCCHHHH-----HHHHHHHhcCCcccCCCCeEEEEEcCh
Confidence 6678999987776664 5678888888 9999987544
No 480
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=20.91 E-value=98 Score=25.84 Aligned_cols=36 Identities=28% Similarity=0.282 Sum_probs=24.1
Q ss_pred CCCCEEEEEcCCCCcChHHHHHHHHHHHhCC--CeEEEEeCC
Q 012744 1 MSSPHVVVIPNPEQGHVIPLLELSQNLAKHG--LRITFVNSE 40 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~p~~~la~~L~~~G--h~Vt~~~~~ 40 (457)
|+.++ ++++. +.|-+- ..+++.|+++| ++|+++.-.
T Consensus 1 m~~k~-vlItG-asggiG--~~la~~l~~~g~~~~V~~~~r~ 38 (250)
T 1yo6_A 1 MSPGS-VVVTG-ANRGIG--LGLVQQLVKDKNIRHIIATARD 38 (250)
T ss_dssp CCCSE-EEESS-CSSHHH--HHHHHHHHTCTTCCEEEEEESS
T ss_pred CCCCE-EEEec-CCchHH--HHHHHHHHhcCCCcEEEEEecC
Confidence 55444 44544 344333 57899999999 999998754
No 481
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=20.90 E-value=73 Score=27.08 Aligned_cols=34 Identities=21% Similarity=0.423 Sum_probs=24.6
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
.++++++.++.| +- .++|+.|+++|++|+++.-.
T Consensus 7 ~k~~lVTGas~G-IG--~aia~~l~~~G~~V~~~~r~ 40 (250)
T 3nyw_A 7 KGLAIITGASQG-IG--AVIAAGLATDGYRVVLIARS 40 (250)
T ss_dssp CCEEEEESTTSH-HH--HHHHHHHHHHTCEEEEEESC
T ss_pred CCEEEEECCCcH-HH--HHHHHHHHHCCCEEEEEECC
Confidence 456777766542 22 58899999999999888653
No 482
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=20.89 E-value=52 Score=27.74 Aligned_cols=19 Identities=21% Similarity=0.410 Sum_probs=16.8
Q ss_pred HHHHHHHHhCCCeEEEEeC
Q 012744 21 LELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 21 ~~la~~L~~~Gh~Vt~~~~ 39 (457)
+.+|..|+++|++|+++=-
T Consensus 15 L~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 15 LSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp HHHHHHHHHTTCCEEEECS
T ss_pred HHHHHHHHHCCCCEEEEEC
Confidence 6789999999999999864
No 483
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=20.87 E-value=3.8e+02 Score=25.43 Aligned_cols=41 Identities=7% Similarity=0.037 Sum_probs=32.1
Q ss_pred EEEEcCCCCcChHHHHHHHHHHHhC-CCeEEEEeCCcchhHH
Q 012744 6 VVVIPNPEQGHVIPLLELSQNLAKH-GLRITFVNSEYNHKRV 46 (457)
Q Consensus 6 vl~~~~~~~GH~~p~~~la~~L~~~-Gh~Vt~~~~~~~~~~~ 46 (457)
+++...|+.|=-.-++.+|..++.+ |..|.+++.....+.+
T Consensus 245 ~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s~~~l 286 (503)
T 1q57_A 245 IMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEESVEET 286 (503)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSCHHHH
T ss_pred EEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCCHHHH
Confidence 4555667778888889999999887 9999999987765543
No 484
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=20.87 E-value=73 Score=26.12 Aligned_cols=33 Identities=21% Similarity=0.219 Sum_probs=22.8
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|||+++- +.|.+- ..+++.|.++||+|+++...
T Consensus 1 m~i~iiG--a~G~~G--~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLG--GTGNLG--KGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEc--CCCHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 4677763 244443 35788999999999987653
No 485
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=20.79 E-value=1.2e+02 Score=26.13 Aligned_cols=34 Identities=12% Similarity=0.187 Sum_probs=25.4
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
.|+++++.++.| + =.++|++|+++|++|+++.-.
T Consensus 30 ~k~vlVTGas~G-I--G~aia~~l~~~G~~Vi~~~r~ 63 (281)
T 3ppi_A 30 GASAIVSGGAGG-L--GEATVRRLHADGLGVVIADLA 63 (281)
T ss_dssp TEEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 467777776654 2 257899999999999887643
No 486
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=20.79 E-value=93 Score=26.68 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=24.6
Q ss_pred CCeeEE-EecCCcc-hHHHHHHHcCCceEEEechh
Q 012744 106 EKTACL-IADGAAG-WAIEVAEKMKLRRAVVVITS 138 (457)
Q Consensus 106 ~~~D~v-v~D~~~~-~~~~~A~~lgiP~v~~~~~~ 138 (457)
..||+| |.|+..- .+..=|.++|||.|.++.+-
T Consensus 150 ~~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDTn 184 (253)
T 3bch_A 150 REPRLLVVTDPRADHQPLTEASYVNLPTIALCNTD 184 (253)
T ss_dssp CSCSEEEESCTTTTHHHHHHHHHTTCCEEEEECTT
T ss_pred CCCCEEEEECCCccchHHHHHHHhCCCEEEEEcCC
Confidence 468875 5676554 66777899999999987654
No 487
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=20.77 E-value=1.3e+02 Score=22.98 Aligned_cols=38 Identities=13% Similarity=0.066 Sum_probs=24.2
Q ss_pred CCCCEEEEEcCCCCcChH--HHHHHHHHHHhCCCeEEEEeC
Q 012744 1 MSSPHVVVIPNPEQGHVI--PLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 1 m~~~~vl~~~~~~~GH~~--p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
|++..|+|+.. ..|+.. .+..+++.|.++|+.|.....
T Consensus 2 ~~~~~vv~~HG-~~~~~~~~~~~~~~~~l~~~g~~v~~~d~ 41 (176)
T 2qjw_A 2 MSRGHCILAHG-FESGPDALKVTALAEVAERLGWTHERPDF 41 (176)
T ss_dssp CSSCEEEEECC-TTCCTTSHHHHHHHHHHHHTTCEEECCCC
T ss_pred CCCcEEEEEeC-CCCCccHHHHHHHHHHHHHCCCEEEEeCC
Confidence 34555555543 333333 466899999999988876543
No 488
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=20.75 E-value=73 Score=28.23 Aligned_cols=33 Identities=21% Similarity=0.208 Sum_probs=25.0
Q ss_pred CCEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 3 SPHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
+++|.|+-.|..|. .+|+.|.+.||+|+++...
T Consensus 30 ~~~I~iIG~G~mG~-----~~a~~l~~~g~~V~~~~~~ 62 (316)
T 2uyy_A 30 DKKIGFLGLGLMGS-----GIVSNLLKMGHTVTVWNRT 62 (316)
T ss_dssp SSCEEEECCSHHHH-----HHHHHHHHTTCCEEEECSS
T ss_pred CCeEEEEcccHHHH-----HHHHHHHhCCCEEEEEeCC
Confidence 47888887666553 5788899999999887643
No 489
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=20.75 E-value=1.4e+02 Score=23.13 Aligned_cols=38 Identities=13% Similarity=-0.030 Sum_probs=28.3
Q ss_pred CEEEEEcCCCCc---ChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 4 PHVVVIPNPEQG---HVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 4 ~~vl~~~~~~~G---H~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
..++++++|+.| ...-+..++++|.+.++++++++...
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~ 61 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGN 61 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSS
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCc
Confidence 357788888886 44556778888887788888887644
No 490
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=20.74 E-value=1.1e+02 Score=25.96 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=22.9
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
+.++++.++. -+- ..++++|+++|++|+++.-.
T Consensus 14 k~vlItGasg-giG--~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 14 RVAIVTGGAQ-NIG--LACVTALAEAGARVIIADLD 46 (260)
T ss_dssp CEEEEETTTS-HHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCc-hHH--HHHHHHHHHCCCEEEEEeCC
Confidence 4555554443 232 57899999999999988754
No 491
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=20.72 E-value=75 Score=23.34 Aligned_cols=13 Identities=23% Similarity=0.491 Sum_probs=10.1
Q ss_pred HHHhCCCeEEEEe
Q 012744 26 NLAKHGLRITFVN 38 (457)
Q Consensus 26 ~L~~~Gh~Vt~~~ 38 (457)
++++.|.+|.+++
T Consensus 74 ~~~~~G~~V~~l~ 86 (117)
T 3hh1_A 74 ELLEEGSDVALVT 86 (117)
T ss_dssp HHHHTTCCEEEEE
T ss_pred HHHHCCCeEEEEe
Confidence 3346799999998
No 492
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=20.71 E-value=1.3e+02 Score=22.27 Aligned_cols=32 Identities=9% Similarity=0.128 Sum_probs=21.3
Q ss_pred CEEEEEcC-CCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 4 PHVVVIPN-PEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 4 ~~vl~~~~-~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
.+|+++|. ++ ......++.|.+.||+|..+..
T Consensus 90 ~~ivvyC~~~G----~rs~~a~~~L~~~G~~v~~l~G 122 (134)
T 3g5j_A 90 DNIVIYCARGG----MRSGSIVNLLSSLGVNVYQLEG 122 (134)
T ss_dssp SEEEEECSSSS----HHHHHHHHHHHHTTCCCEEETT
T ss_pred CeEEEEECCCC----hHHHHHHHHHHHcCCceEEEeC
Confidence 56777773 33 4456777888888887766543
No 493
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=20.58 E-value=82 Score=26.23 Aligned_cols=36 Identities=17% Similarity=0.331 Sum_probs=28.4
Q ss_pred EEEEc-CCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 6 VVVIP-NPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 6 vl~~~-~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
|.|.+ -|+.|=-.-...||..|+++|++|.++-...
T Consensus 5 i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 5 ISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp EEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred EEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 44443 4456888899999999999999999997654
No 494
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=20.55 E-value=77 Score=27.90 Aligned_cols=37 Identities=14% Similarity=0.172 Sum_probs=28.7
Q ss_pred EEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCCc
Q 012744 5 HVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEY 41 (457)
Q Consensus 5 ~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~ 41 (457)
..+++..|..+|..-...+++.|.++|++|...-.+.
T Consensus 36 ~~VvllHG~g~~~~~~~~~~~~L~~~G~~Vi~~D~rG 72 (305)
T 1tht_A 36 NTILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLH 72 (305)
T ss_dssp CEEEEECTTCGGGGGGHHHHHHHHTTTCCEEEECCCB
T ss_pred CEEEEecCCccCchHHHHHHHHHHHCCCEEEEeeCCC
Confidence 4666777777777777889999999999998765443
No 495
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=20.50 E-value=2.1e+02 Score=21.33 Aligned_cols=51 Identities=12% Similarity=-0.022 Sum_probs=31.7
Q ss_pred cCCceeccccccchhhhHHhhhhhhc-eeEEeeccCCCccCHHHHHHHHHHHhCCHHH
Q 012744 364 NGVPFLCWPFFADQFMNTTYICDVWK-VGLRLERNQSGIIGREEIKNKVDQVLGDQNF 420 (457)
Q Consensus 364 ~GvP~l~~P~~~DQ~~na~~v~~~lG-~g~~l~~~~~~~~~~~~l~~~i~~~l~~~~~ 420 (457)
..+|+|++--..|....... .+ .| +--.+. +.++.++|.++|+.++....+
T Consensus 75 ~~~~ii~~s~~~~~~~~~~~-~~-~g~~~~~l~----KP~~~~~L~~~i~~~l~~~~~ 126 (151)
T 3kcn_A 75 PNSVYLMLTGNQDLTTAMEA-VN-EGQVFRFLN----KPCQMSDIKAAINAGIKQYDL 126 (151)
T ss_dssp SSCEEEEEECGGGHHHHHHH-HH-HTCCSEEEE----SSCCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCHHHHHHH-HH-cCCeeEEEc----CCCCHHHHHHHHHHHHHHHHH
Confidence 46777776554444333333 33 36 533443 558999999999999975543
No 496
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=20.47 E-value=1.1e+02 Score=25.89 Aligned_cols=34 Identities=12% Similarity=0.225 Sum_probs=24.8
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
-|+++++.++.| + =.++|++|+++|++|+++.-.
T Consensus 8 gk~~lVTGas~g-I--G~a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 8 GKKAIVIGGTHG-M--GLATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp TCEEEEETCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 366777766553 2 257899999999999988653
No 497
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=20.42 E-value=1.4e+02 Score=25.39 Aligned_cols=34 Identities=9% Similarity=0.293 Sum_probs=24.7
Q ss_pred EEEEEcCCCC-cChHHHHHHHHHHHhCCCeEEEEeCC
Q 012744 5 HVVVIPNPEQ-GHVIPLLELSQNLAKHGLRITFVNSE 40 (457)
Q Consensus 5 ~vl~~~~~~~-GH~~p~~~la~~L~~~Gh~Vt~~~~~ 40 (457)
|+++++.++. |-+- .++|++|+++|++|+++.-.
T Consensus 10 k~vlVTGas~~~gIG--~~ia~~l~~~G~~V~~~~r~ 44 (265)
T 1qsg_A 10 KRILVTGVASKLSIA--YGIAQAMHREGAELAFTYQN 44 (265)
T ss_dssp CEEEECCCCSTTSHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCCCCHH--HHHHHHHHHCCCEEEEEcCc
Confidence 5667776652 4444 47899999999999988654
No 498
>3kp1_A D-ornithine aminomutase E component; 5 aminomutase (OAM), metal binding protein; HET: PLP B12 5AD; 2.01A {Clostridium sticklandii} PDB: 3kow_A* 3koy_A* 3koz_A* 3kp0_A* 3kox_A*
Probab=20.41 E-value=1.1e+02 Score=30.23 Aligned_cols=109 Identities=11% Similarity=0.103 Sum_probs=64.0
Q ss_pred CCEEEEEcCCCCcChHHHHHH----HHHHHhCCCeEEEEeCCcchhHHHhhhcCCCCCCCCeEEEecCCCCCCCCCcchH
Q 012744 3 SPHVVVIPNPEQGHVIPLLEL----SQNLAKHGLRITFVNSEYNHKRVLESLEGKNYIGEQIHLVSIPDGMEPWDDRSDM 78 (457)
Q Consensus 3 ~~~vl~~~~~~~GH~~p~~~l----a~~L~~~Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (457)
+.+|++.+.++-+|-.-..-+ +..|...|++|+.+......+.+.+.... .+.+.+.++..+...
T Consensus 602 kGKVVIATVgGD~HDIGKklVaNIVa~~LE~aGFEVIDLGvdVPpEeIVeAA~E-----edADVVGLSsLLTt~------ 670 (763)
T 3kp1_A 602 PLKIVAATVGEDEHSVGLREVIDIKHGGIEKYGVEVHYLGTSVPVEKLVDAAIE-----LKADAILASTIISHD------ 670 (763)
T ss_dssp CCEEEEEEBTTCCCCHHHHHTTSTTTTCGGGGTCEEEECCSSBCHHHHHHHHHH-----TTCSEEEEECCCCGG------
T ss_pred CCEEEEEeCCCChhhhhhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHH-----cCCCEEEEeccccCc------
Confidence 679999999999999988655 57888999999999876544433322111 156666665332110
Q ss_pred HHHHHHHHHhcchHHHHHHHHHhcCCCCC--eeEEEecCCcchHHHHHHHcCCceEE
Q 012744 79 RKLLEKRLQVMPGKLEGLIEEIHGREGEK--TACLIADGAAGWAIEVAEKMKLRRAV 133 (457)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~D~vv~D~~~~~~~~~A~~lgiP~v~ 133 (457)
......++++++.+++.+ .+ .-++|.-.. ....+|+..|.=.+.
T Consensus 671 --------dihL~~MkevIelLrE~G-lrDkIkVIVGGa~--~tqd~AkeIGADa~f 716 (763)
T 3kp1_A 671 --------DIHYKNMKRIHELAVEKG-IRDKIMIGCGGTQ--VTPEVAVKQGVDAGF 716 (763)
T ss_dssp --------GHHHHHHHHHHHHHHHTT-CTTTSEEEEECTT--CCHHHHHTTTCSEEE
T ss_pred --------hhhHHHHHHHHHHHHhcC-CCCCCEEEEECCC--CCHHHHHHcCCcEEE
Confidence 001134455566665533 22 234444332 235667888865544
No 499
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=20.34 E-value=1.1e+02 Score=27.44 Aligned_cols=39 Identities=8% Similarity=0.129 Sum_probs=31.3
Q ss_pred CEEEEEc-CCCCcChHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012744 4 PHVVVIP-NPEQGHVIPLLELSQNLAKHGLRITFVNSEYN 42 (457)
Q Consensus 4 ~~vl~~~-~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~~~~ 42 (457)
.+++|++ -|+.|=-.-...||..|+++|++|.++.....
T Consensus 19 ~~i~v~sgkGGvGKTTva~~LA~~lA~~G~rVllvD~D~~ 58 (329)
T 2woo_A 19 LKWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPA 58 (329)
T ss_dssp CCEEEEECSSSSSHHHHHHHHHHHHHTSSSCEEEEECCTT
T ss_pred CEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 3455544 45669999999999999999999999987665
No 500
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=20.33 E-value=62 Score=26.87 Aligned_cols=31 Identities=16% Similarity=0.330 Sum_probs=22.0
Q ss_pred CEEEEEcCCCCcChHHHHHHHHHHHhCCCeEEEEeC
Q 012744 4 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNS 39 (457)
Q Consensus 4 ~~vl~~~~~~~GH~~p~~~la~~L~~~Gh~Vt~~~~ 39 (457)
++|.|+-.|..| ..+|+.|.++||+|+++..
T Consensus 29 ~~I~iiG~G~~G-----~~la~~l~~~g~~V~~~~r 59 (215)
T 2vns_A 29 PKVGILGSGDFA-----RSLATRLVGSGFKVVVGSR 59 (215)
T ss_dssp CCEEEECCSHHH-----HHHHHHHHHTTCCEEEEES
T ss_pred CEEEEEccCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 577777544333 3568889999999988764
Done!