Query 012745
Match_columns 457
No_of_seqs 628 out of 3603
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 15:25:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012745.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012745hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ogq_A PGIP-2, polygalacturona 99.9 2.3E-27 7.7E-32 229.3 14.2 190 6-201 3-208 (313)
2 3rgz_A Protein brassinosteroid 99.9 4.2E-25 1.5E-29 238.7 12.8 194 5-201 8-234 (768)
3 4fcg_A Uncharacterized protein 99.9 9.1E-25 3.1E-29 212.4 8.6 198 2-203 20-242 (328)
4 4ecn_A Leucine-rich repeat pro 99.9 4.4E-24 1.5E-28 230.9 8.7 190 6-202 266-585 (876)
5 3rgz_A Protein brassinosteroid 99.9 2.8E-23 9.4E-28 224.5 13.5 165 49-215 514-751 (768)
6 4eco_A Uncharacterized protein 99.9 1.3E-23 4.5E-28 222.1 10.4 170 8-180 29-318 (636)
7 3m19_A Variable lymphocyte rec 99.9 3.6E-22 1.2E-26 186.4 16.0 156 49-205 35-194 (251)
8 2v9t_B SLIT homolog 2 protein 99.9 2.5E-22 8.4E-27 183.8 12.9 148 35-184 8-169 (220)
9 2v70_A SLIT-2, SLIT homolog 2 99.9 1.5E-22 5.2E-27 185.2 11.3 150 35-185 8-171 (220)
10 2o6s_A Variable lymphocyte rec 99.9 1.2E-21 4.2E-26 177.4 15.7 151 35-187 4-168 (208)
11 1ogq_A PGIP-2, polygalacturona 99.9 4.7E-22 1.6E-26 191.9 12.5 159 50-212 150-312 (313)
12 3e6j_A Variable lymphocyte rec 99.9 9.9E-22 3.4E-26 180.9 14.0 152 34-188 15-180 (229)
13 2o6q_A Variable lymphocyte rec 99.9 8.6E-21 2.9E-25 179.1 15.8 151 50-201 38-192 (270)
14 2xot_A Amphoterin-induced prot 99.9 2.1E-21 7.1E-26 191.2 12.0 167 35-205 15-204 (361)
15 2o6q_A Variable lymphocyte rec 99.8 1.6E-20 5.4E-25 177.2 16.3 160 36-200 3-167 (270)
16 1p9a_G Platelet glycoprotein I 99.8 2.1E-20 7.3E-25 178.3 14.4 152 50-204 56-209 (290)
17 2v9t_B SLIT homolog 2 protein 99.8 2.1E-20 7.3E-25 170.9 13.5 150 52-205 14-167 (220)
18 3rfs_A Internalin B, repeat mo 99.8 4.2E-20 1.4E-24 174.5 15.6 154 49-205 63-220 (272)
19 1w8a_A SLIT protein; signaling 99.8 1.8E-20 6.2E-25 167.6 10.1 152 52-207 11-166 (192)
20 2v70_A SLIT-2, SLIT homolog 2 99.8 7.4E-20 2.5E-24 167.2 13.9 150 52-205 14-168 (220)
21 3e6j_A Variable lymphocyte rec 99.8 9.5E-20 3.3E-24 167.6 14.0 154 45-205 18-174 (229)
22 3m19_A Variable lymphocyte rec 99.8 6.5E-20 2.2E-24 171.1 12.6 160 37-202 4-167 (251)
23 1ozn_A Reticulon 4 receptor; N 99.8 4.9E-20 1.7E-24 175.2 11.6 152 49-201 56-212 (285)
24 1ozn_A Reticulon 4 receptor; N 99.8 1.9E-19 6.6E-24 171.1 15.6 153 49-202 32-189 (285)
25 1w8a_A SLIT protein; signaling 99.8 2E-20 6.9E-25 167.3 7.3 168 35-206 5-186 (192)
26 4g8a_A TOLL-like receptor 4; l 99.8 9.9E-20 3.4E-24 191.8 12.2 135 49-184 52-190 (635)
27 3rfs_A Internalin B, repeat mo 99.8 5.7E-19 1.9E-23 166.7 14.8 140 48-188 84-226 (272)
28 1p9a_G Platelet glycoprotein I 99.8 8.1E-19 2.8E-23 167.3 14.9 152 49-203 31-185 (290)
29 2z62_A TOLL-like receptor 4, v 99.8 4.8E-19 1.6E-23 167.5 12.8 110 49-159 52-163 (276)
30 2z62_A TOLL-like receptor 4, v 99.8 6.4E-19 2.2E-23 166.6 13.1 152 49-201 28-188 (276)
31 2z80_A TOLL-like receptor 2, v 99.8 2.7E-19 9.1E-24 175.5 10.8 171 29-201 22-209 (353)
32 2o6s_A Variable lymphocyte rec 99.8 2.3E-18 7.9E-23 155.7 15.6 151 51-205 9-163 (208)
33 2z66_A Variable lymphocyte rec 99.8 2.1E-19 7.1E-24 172.6 9.0 164 35-201 4-186 (306)
34 4asz_A BDNF/NT-3 growth factor 99.8 4.5E-19 1.5E-23 169.2 11.2 113 339-451 17-145 (299)
35 2wfh_A SLIT homolog 2 protein 99.8 4.7E-19 1.6E-23 158.5 10.5 129 52-184 13-143 (193)
36 3o6n_A APL1; leucine-rich repe 99.8 5.2E-19 1.8E-23 175.8 11.8 150 49-201 45-197 (390)
37 4aoj_A High affinity nerve gro 99.8 6.6E-19 2.3E-23 170.4 11.9 113 339-451 45-175 (329)
38 2z66_A Variable lymphocyte rec 99.8 4.7E-19 1.6E-23 170.1 10.6 153 49-203 78-236 (306)
39 4ezg_A Putative uncharacterize 99.8 5.2E-19 1.8E-23 158.7 10.0 149 49-202 44-193 (197)
40 2o6r_A Variable lymphocyte rec 99.8 1E-18 3.6E-23 153.9 11.3 139 35-188 4-145 (177)
41 2xwt_C Thyrotropin receptor; s 99.8 9E-19 3.1E-23 162.0 11.1 150 49-201 31-190 (239)
42 3oja_B Anopheles plasmodium-re 99.8 1E-18 3.4E-23 183.5 12.7 150 49-201 51-203 (597)
43 3zyi_A Leucine-rich repeat-con 99.8 1.7E-18 5.7E-23 175.6 13.7 150 49-200 75-228 (452)
44 4fcg_A Uncharacterized protein 99.8 1.9E-18 6.6E-23 167.6 13.4 151 49-202 104-265 (328)
45 4gt4_A Tyrosine-protein kinase 99.8 1.2E-18 4.2E-23 166.9 11.7 113 339-451 30-162 (308)
46 2id5_A Lingo-1, leucine rich r 99.8 1.2E-18 4E-23 177.9 12.0 152 49-201 32-187 (477)
47 3zyj_A Leucine-rich repeat-con 99.8 1.4E-18 4.8E-23 175.6 12.4 154 49-205 112-294 (440)
48 3vq2_A TLR4, TOLL-like recepto 99.8 2.2E-18 7.4E-23 181.2 14.3 152 49-201 32-192 (606)
49 3v47_A TOLL-like receptor 5B a 99.8 1.4E-18 4.6E-23 176.2 11.7 156 49-205 212-410 (455)
50 3zyi_A Leucine-rich repeat-con 99.8 2.3E-18 7.8E-23 174.6 12.8 155 49-206 123-306 (452)
51 3vq2_A TLR4, TOLL-like recepto 99.8 1.2E-18 4E-23 183.2 10.4 157 49-205 399-560 (606)
52 3zyj_A Leucine-rich repeat-con 99.8 3.6E-18 1.2E-22 172.6 13.2 150 49-200 64-217 (440)
53 3v47_A TOLL-like receptor 5B a 99.7 3.4E-18 1.1E-22 173.3 12.2 141 49-190 275-418 (455)
54 3j0a_A TOLL-like receptor 5; m 99.7 2.7E-18 9.1E-23 187.4 12.2 152 51-205 403-562 (844)
55 2ell_A Acidic leucine-rich nuc 99.7 1.3E-18 4.6E-23 151.8 7.6 135 48-184 23-164 (168)
56 2z81_A CD282 antigen, TOLL-lik 99.7 2.3E-18 7.9E-23 178.7 9.8 151 49-200 26-182 (549)
57 3t6q_A CD180 antigen; protein- 99.7 8.1E-18 2.8E-22 176.8 13.2 152 49-201 33-190 (606)
58 2wfh_A SLIT homolog 2 protein 99.7 1E-17 3.5E-22 149.7 11.9 122 35-159 7-140 (193)
59 3omv_A RAF proto-oncogene seri 99.7 4.6E-18 1.6E-22 162.4 9.6 106 339-451 40-149 (307)
60 3oja_A Leucine-rich immune mol 99.7 2.9E-18 9.8E-23 175.4 8.3 151 49-202 58-226 (487)
61 1ziw_A TOLL-like receptor 3; i 99.7 8.8E-18 3E-22 179.0 12.3 151 49-200 25-181 (680)
62 1wwl_A Monocyte differentiatio 99.7 2.4E-18 8.3E-23 165.7 6.6 149 49-201 121-285 (312)
63 2id5_A Lingo-1, leucine rich r 99.7 1.2E-17 4.1E-22 170.4 11.7 152 49-201 56-211 (477)
64 2xwt_C Thyrotropin receptor; s 99.7 9.5E-18 3.2E-22 155.1 9.9 151 49-202 55-217 (239)
65 4glp_A Monocyte differentiatio 99.7 3E-18 1E-22 164.9 6.8 130 50-180 118-264 (310)
66 3a79_B TLR6, VLRB.59, TOLL-lik 99.7 2E-17 6.8E-22 172.3 13.4 154 49-205 353-512 (562)
67 1xku_A Decorin; proteoglycan, 99.7 2.1E-17 7E-22 160.4 12.6 159 36-201 29-203 (330)
68 3t6q_A CD180 antigen; protein- 99.7 6.6E-18 2.3E-22 177.5 9.7 135 49-184 376-517 (606)
69 2ft3_A Biglycan; proteoglycan, 99.7 2.3E-17 7.8E-22 160.3 12.8 159 36-202 31-205 (332)
70 4fih_A Serine/threonine-protei 99.7 9.4E-18 3.2E-22 162.5 9.5 107 341-451 80-187 (346)
71 1xeu_A Internalin C; cellular 99.7 1.6E-17 5.5E-22 156.0 10.8 146 49-204 41-186 (263)
72 4b9d_A Serine/threonine-protei 99.7 2E-17 6.8E-22 160.5 11.7 111 340-451 29-142 (350)
73 1wwl_A Monocyte differentiatio 99.7 1.7E-18 5.9E-23 166.8 4.1 128 51-180 65-214 (312)
74 3oja_A Leucine-rich immune mol 99.7 2.8E-18 9.7E-23 175.4 5.8 150 50-205 100-252 (487)
75 3fpq_A Serine/threonine-protei 99.7 2.1E-17 7.1E-22 156.7 11.1 109 340-451 31-146 (290)
76 3o53_A Protein LRIM1, AGAP0063 99.7 5.3E-18 1.8E-22 163.8 7.0 151 49-202 58-226 (317)
77 1ziw_A TOLL-like receptor 3; i 99.7 4.2E-17 1.4E-21 173.7 14.6 154 51-205 456-624 (680)
78 3j0a_A TOLL-like receptor 5; m 99.7 3.1E-17 1.1E-21 178.9 13.6 146 37-184 13-165 (844)
79 2xot_A Amphoterin-induced prot 99.7 3E-17 1E-21 161.4 12.0 147 52-202 21-175 (361)
80 2z63_A TOLL-like receptor 4, v 99.7 1.6E-17 5.3E-22 173.1 10.5 155 49-205 373-533 (570)
81 3o6n_A APL1; leucine-rich repe 99.7 2.8E-17 9.5E-22 163.3 11.5 152 49-201 93-306 (390)
82 2z7x_B TOLL-like receptor 1, v 99.7 1.8E-17 6E-22 171.0 10.4 154 49-205 324-483 (520)
83 2je0_A Acidic leucine-rich nuc 99.7 3.2E-18 1.1E-22 146.2 3.8 126 49-176 17-149 (149)
84 1h6t_A Internalin B; cell adhe 99.7 3E-17 1E-21 156.4 10.9 146 49-203 68-213 (291)
85 2z80_A TOLL-like receptor 2, v 99.7 1.3E-17 4.4E-22 163.4 8.6 114 49-163 76-192 (353)
86 4ezg_A Putative uncharacterize 99.7 3.2E-17 1.1E-21 147.0 10.3 128 49-181 66-195 (197)
87 4fie_A Serine/threonine-protei 99.7 2.6E-17 8.9E-22 163.4 10.6 107 341-451 157-264 (423)
88 3oja_B Anopheles plasmodium-re 99.7 4.5E-17 1.6E-21 170.9 12.5 153 49-202 75-290 (597)
89 1h6u_A Internalin H; cell adhe 99.7 5.1E-17 1.7E-21 156.2 11.7 145 49-202 63-207 (308)
90 1h6u_A Internalin H; cell adhe 99.7 2.3E-17 8E-22 158.5 9.0 148 48-204 84-231 (308)
91 4aw0_A HPDK1, 3-phosphoinositi 99.7 3E-17 1E-21 156.6 9.6 110 339-451 36-149 (311)
92 4g8a_A TOLL-like receptor 4; l 99.7 3.9E-17 1.3E-21 172.0 11.0 157 49-205 420-582 (635)
93 2z63_A TOLL-like receptor 4, v 99.7 7.9E-17 2.7E-21 167.8 13.2 152 49-201 28-188 (570)
94 4b8c_D Glucose-repressible alc 99.7 6.8E-18 2.3E-22 180.5 4.9 174 8-184 131-333 (727)
95 1xku_A Decorin; proteoglycan, 99.7 1E-16 3.4E-21 155.5 12.6 147 51-201 123-274 (330)
96 3o53_A Protein LRIM1, AGAP0063 99.7 1.2E-17 4E-22 161.3 5.8 151 49-205 99-252 (317)
97 4g31_A Eukaryotic translation 99.7 7.3E-17 2.5E-21 154.0 11.2 112 340-451 10-135 (299)
98 3hmm_A TGF-beta receptor type- 99.7 5.9E-17 2E-21 155.2 10.5 107 340-452 8-118 (303)
99 2z81_A CD282 antigen, TOLL-lik 99.7 1.1E-16 3.8E-21 166.0 13.2 155 49-205 334-512 (549)
100 4eco_A Uncharacterized protein 99.7 1.7E-16 5.8E-21 167.7 14.8 153 49-206 433-603 (636)
101 2ft3_A Biglycan; proteoglycan, 99.7 1.4E-16 4.7E-21 154.7 11.9 150 49-202 102-276 (332)
102 2o6r_A Variable lymphocyte rec 99.7 1.5E-16 5.3E-21 139.9 10.7 113 49-162 28-141 (177)
103 1h6t_A Internalin B; cell adhe 99.7 1.3E-16 4.3E-21 152.2 10.7 145 49-202 46-190 (291)
104 1m9s_A Internalin B; cell inva 99.7 1.2E-16 4.3E-21 166.9 11.3 146 48-202 64-209 (605)
105 1a9n_A U2A', U2A'; complex (nu 99.7 5.7E-17 2E-21 142.6 6.9 129 49-181 19-154 (176)
106 4g3f_A NF-kappa-beta-inducing 99.7 8.1E-17 2.8E-21 155.4 8.5 104 340-451 63-167 (336)
107 3cvr_A Invasion plasmid antige 99.7 1.2E-16 4E-21 165.5 9.9 155 27-202 33-192 (571)
108 4ay9_X Follicle-stimulating ho 99.7 2.4E-16 8.1E-21 154.3 10.8 147 36-184 7-171 (350)
109 3hyh_A Carbon catabolite-derep 99.6 4.5E-16 1.5E-20 146.3 11.4 108 340-451 18-129 (275)
110 2ell_A Acidic leucine-rich nuc 99.6 2.7E-16 9.1E-21 137.1 8.9 130 71-202 21-159 (168)
111 4ecn_A Leucine-rich repeat pro 99.6 9.6E-16 3.3E-20 165.9 15.1 150 49-203 673-840 (876)
112 4glp_A Monocyte differentiatio 99.6 7.6E-17 2.6E-21 155.1 5.3 154 49-203 91-264 (310)
113 3g39_A Variable lymphocyte rec 99.6 7.5E-16 2.6E-20 134.6 10.5 104 52-159 12-116 (170)
114 4fmz_A Internalin; leucine ric 99.6 6.2E-16 2.1E-20 150.9 10.3 147 49-203 177-324 (347)
115 1dce_A Protein (RAB geranylger 99.6 5.6E-16 1.9E-20 160.9 10.5 108 75-186 442-552 (567)
116 3a79_B TLR6, VLRB.59, TOLL-lik 99.6 1E-15 3.6E-20 159.3 12.5 131 49-184 52-188 (562)
117 1o6v_A Internalin A; bacterial 99.6 5.6E-16 1.9E-20 157.6 10.0 144 49-201 221-364 (466)
118 3g39_A Variable lymphocyte rec 99.6 1.1E-15 3.6E-20 133.7 10.4 113 75-189 10-124 (170)
119 1xeu_A Internalin C; cellular 99.6 1.7E-15 5.7E-20 142.2 12.4 127 48-183 62-188 (263)
120 2z7x_B TOLL-like receptor 1, v 99.6 7.6E-16 2.6E-20 158.7 10.9 137 49-192 21-163 (520)
121 3ubd_A Ribosomal protein S6 ki 99.6 2E-16 6.8E-21 150.7 6.0 109 340-451 29-143 (304)
122 1m9s_A Internalin B; cell inva 99.6 5.7E-16 1.9E-20 161.9 9.9 145 49-202 43-187 (605)
123 2je0_A Acidic leucine-rich nuc 99.6 4E-16 1.4E-20 133.1 7.2 123 72-196 15-146 (149)
124 2r9u_A Variable lymphocyte rec 99.6 1.5E-15 5.1E-20 133.3 10.7 105 52-160 15-120 (174)
125 4ase_A Vascular endothelial gr 99.6 4.3E-16 1.5E-20 151.9 8.0 113 339-451 68-202 (353)
126 2r9u_A Variable lymphocyte rec 99.6 2.2E-15 7.5E-20 132.2 10.8 113 76-190 14-128 (174)
127 4b8c_D Glucose-repressible alc 99.6 9.3E-17 3.2E-21 171.8 0.0 132 49-184 224-358 (727)
128 3uto_A Twitchin; kinase, muscl 99.6 3.3E-15 1.1E-19 155.2 11.1 108 340-450 162-271 (573)
129 3cvr_A Invasion plasmid antige 99.6 4.6E-15 1.6E-19 153.6 11.9 138 49-202 80-242 (571)
130 1a9n_A U2A', U2A'; complex (nu 99.6 1.2E-15 4.1E-20 134.1 6.5 130 69-201 14-151 (176)
131 1o6v_A Internalin A; bacterial 99.6 3.8E-15 1.3E-19 151.4 10.9 147 48-203 198-344 (466)
132 4b99_A Mitogen-activated prote 99.6 6.9E-15 2.4E-19 145.8 11.8 108 340-451 59-175 (398)
133 1ds9_A Outer arm dynein; leuci 99.6 1.7E-17 5.7E-22 148.9 -7.7 132 50-185 19-158 (198)
134 3bz5_A Internalin-J, INLJ; leu 99.6 2.4E-14 8.3E-19 145.0 14.1 139 49-201 64-202 (457)
135 4fmz_A Internalin; leucine ric 99.6 1.2E-14 4.1E-19 141.7 11.2 145 49-201 66-210 (347)
136 1dce_A Protein (RAB geranylger 99.6 7.4E-16 2.5E-20 160.0 2.7 121 49-174 441-567 (567)
137 3bz5_A Internalin-J, INLJ; leu 99.6 2.7E-14 9.2E-19 144.7 14.0 138 50-200 43-180 (457)
138 2ifg_A High affinity nerve gro 99.5 2.1E-14 7.1E-19 140.1 10.7 101 55-159 14-117 (347)
139 3g06_A SSPH2 (leucine-rich rep 99.5 1.7E-14 5.7E-19 151.1 9.4 139 27-183 12-157 (622)
140 3g06_A SSPH2 (leucine-rich rep 99.5 1.2E-13 3.9E-18 144.7 14.9 77 121-203 221-297 (622)
141 1jl5_A Outer protein YOPM; leu 99.5 1.6E-13 5.5E-18 138.8 14.8 118 74-201 131-248 (454)
142 3s95_A LIMK-1, LIM domain kina 99.5 1.2E-13 4E-18 132.5 12.5 107 340-450 15-124 (310)
143 1jl5_A Outer protein YOPM; leu 99.5 1.9E-13 6.6E-18 138.3 14.5 137 49-201 131-268 (454)
144 3v5w_A G-protein coupled recep 99.5 6.6E-14 2.3E-18 145.6 10.4 109 340-451 194-309 (689)
145 2c30_A Serine/threonine-protei 99.5 2.9E-13 9.9E-18 130.6 13.9 97 329-425 24-136 (321)
146 4hcu_A Tyrosine-protein kinase 99.5 2.7E-13 9.2E-18 127.2 12.9 108 340-450 15-122 (269)
147 4f9c_A Cell division cycle 7-r 99.5 1.5E-13 5.1E-18 134.6 11.3 104 340-451 26-134 (361)
148 2ifg_A High affinity nerve gro 99.5 8.8E-14 3E-18 135.7 9.6 129 77-207 11-145 (347)
149 2qkw_B Protein kinase; three-h 99.5 1.8E-13 6.3E-18 131.9 11.7 110 340-450 44-155 (321)
150 3qd2_B Eukaryotic translation 99.5 2.5E-13 8.6E-18 131.1 12.5 111 340-450 11-180 (332)
151 2x4f_A Myosin light chain kina 99.5 1.4E-13 4.8E-18 135.7 10.7 86 340-425 94-180 (373)
152 2qol_A Ephrin receptor; recept 99.5 1.8E-13 6E-18 135.0 11.1 110 340-451 50-164 (373)
153 3goz_A Leucine-rich repeat-con 99.5 1.1E-14 3.8E-19 143.0 2.5 152 49-201 22-207 (362)
154 3fe3_A MAP/microtubule affinit 99.5 2.5E-13 8.5E-18 131.5 11.9 108 340-450 20-130 (328)
155 2ac3_A MAP kinase-interacting 99.5 4.3E-13 1.5E-17 128.8 13.3 107 341-450 19-127 (316)
156 2ast_B S-phase kinase-associat 99.5 2E-15 6.9E-20 146.5 -3.5 112 39-155 38-152 (336)
157 2yab_A Death-associated protei 99.5 3.9E-13 1.3E-17 131.9 12.8 108 340-450 17-131 (361)
158 3fxz_A Serine/threonine-protei 99.4 3.7E-13 1.3E-17 128.4 12.2 86 341-426 26-112 (297)
159 3zgw_A Maternal embryonic leuc 99.4 3.4E-13 1.2E-17 131.6 11.8 108 340-450 15-124 (347)
160 4ay9_X Follicle-stimulating ho 99.4 1.6E-13 5.6E-18 134.1 9.5 154 48-201 53-213 (350)
161 3cbl_A C-FES, proto-oncogene t 99.4 1.3E-13 4.5E-18 136.2 8.9 111 339-451 118-230 (377)
162 1opk_A P150, C-ABL, proto-onco 99.4 2.8E-13 9.7E-18 138.6 11.7 111 339-451 224-335 (495)
163 4fvq_A Tyrosine-protein kinase 99.4 3.5E-13 1.2E-17 127.6 11.0 109 340-450 13-129 (289)
164 3kul_A Ephrin type-A receptor 99.4 4.7E-13 1.6E-17 129.4 12.0 109 340-450 54-167 (325)
165 2y0a_A Death-associated protei 99.4 7.2E-13 2.5E-17 128.1 13.1 108 340-450 16-130 (326)
166 2nru_A Interleukin-1 receptor- 99.4 7.4E-13 2.5E-17 126.6 13.0 119 329-450 14-149 (307)
167 3p86_A Serine/threonine-protei 99.4 3.1E-13 1.1E-17 129.7 10.2 109 340-451 42-154 (309)
168 2ast_B S-phase kinase-associat 99.4 2.6E-15 9E-20 145.7 -4.3 151 49-201 70-233 (336)
169 3uim_A Brassinosteroid insensi 99.4 2.3E-13 7.8E-18 131.4 9.2 123 329-452 19-149 (326)
170 1o6l_A RAC-beta serine/threoni 99.4 5.6E-13 1.9E-17 129.5 11.9 108 340-450 10-121 (337)
171 4euu_A Serine/threonine-protei 99.4 6.3E-13 2.2E-17 127.9 12.1 111 340-450 14-128 (319)
172 2clq_A Mitogen-activated prote 99.4 5.9E-13 2E-17 126.4 11.6 86 341-426 28-114 (295)
173 1tki_A Titin; serine kinase, m 99.4 5.6E-13 1.9E-17 128.7 11.6 108 340-450 10-118 (321)
174 3uc3_A Serine/threonine-protei 99.4 6.6E-13 2.2E-17 130.3 12.2 107 340-450 25-132 (361)
175 3uqc_A Probable conserved tran 99.4 9.7E-13 3.3E-17 124.8 12.8 107 340-451 36-146 (286)
176 2bdw_A Hypothetical protein K1 99.4 7.2E-13 2.5E-17 130.1 12.2 108 340-450 34-144 (362)
177 3gen_A Tyrosine-protein kinase 99.4 1.2E-12 4.1E-17 123.5 13.3 85 340-425 29-113 (283)
178 3f3z_A Calcium/calmodulin-depe 99.4 8.2E-13 2.8E-17 124.3 12.0 87 340-426 14-101 (277)
179 1kob_A Twitchin; kinase, intra 99.4 5.9E-13 2E-17 131.8 11.4 109 340-450 56-165 (387)
180 3sxs_A Cytoplasmic tyrosine-pr 99.4 6.2E-13 2.1E-17 124.5 11.0 85 340-425 13-97 (268)
181 2psq_A Fibroblast growth facto 99.4 7.9E-13 2.7E-17 130.2 12.2 87 340-426 86-182 (370)
182 1qcf_A Haematopoetic cell kina 99.4 3.7E-13 1.3E-17 136.3 10.0 110 339-451 192-301 (454)
183 3kn6_A Ribosomal protein S6 ki 99.4 7.6E-13 2.6E-17 127.9 11.7 104 340-449 16-121 (325)
184 1ds9_A Outer arm dynein; leuci 99.4 8.5E-16 2.9E-20 137.7 -8.7 127 48-181 47-186 (198)
185 3v8s_A RHO-associated protein 99.4 2.2E-13 7.5E-18 135.9 7.7 107 341-451 75-185 (410)
186 4eqm_A Protein kinase; transfe 99.4 1.1E-12 3.7E-17 124.9 12.2 87 340-426 16-106 (294)
187 3kmu_A ILK, integrin-linked ki 99.4 7.6E-13 2.6E-17 123.8 11.0 111 340-452 15-129 (271)
188 3t9t_A Tyrosine-protein kinase 99.4 1.1E-12 3.6E-17 122.7 11.8 108 340-450 13-120 (267)
189 2ca6_A RAN GTPase-activating p 99.4 8E-15 2.7E-19 145.3 -3.5 133 49-182 94-259 (386)
190 1fot_A TPK1 delta, CAMP-depend 99.4 1E-12 3.4E-17 126.7 11.3 109 340-451 11-123 (318)
191 3tki_A Serine/threonine-protei 99.4 6.6E-13 2.2E-17 128.2 9.9 108 340-450 12-121 (323)
192 4aw2_A Serine/threonine-protei 99.4 4.1E-13 1.4E-17 135.0 8.5 109 340-450 79-191 (437)
193 1fmk_A C-SRC, P60-SRC, tyrosin 99.4 6.7E-13 2.3E-17 134.3 10.0 110 339-451 188-297 (452)
194 3a62_A Ribosomal protein S6 ki 99.4 1.1E-12 3.9E-17 126.8 11.1 108 340-450 22-137 (327)
195 2jam_A Calcium/calmodulin-depe 99.4 1.5E-12 5.1E-17 124.4 11.8 108 340-450 14-122 (304)
196 3soa_A Calcium/calmodulin-depe 99.4 1.5E-12 5E-17 131.3 12.1 107 340-449 16-125 (444)
197 1k9a_A Carboxyl-terminal SRC k 99.4 1.3E-12 4.6E-17 132.0 11.9 108 340-451 198-306 (450)
198 3ugc_A Tyrosine-protein kinase 99.4 1.3E-12 4.6E-17 124.1 11.1 87 340-426 15-108 (295)
199 1rdq_E PKA C-alpha, CAMP-depen 99.4 1.3E-12 4.5E-17 127.6 11.2 108 340-450 46-157 (350)
200 4eut_A Serine/threonine-protei 99.4 1.2E-12 4E-17 130.2 10.9 111 340-450 14-128 (396)
201 3l9p_A Anaplastic lymphoma kin 99.4 8.8E-13 3E-17 129.7 9.9 111 340-450 76-197 (367)
202 2vd5_A DMPK protein; serine/th 99.4 5.1E-13 1.7E-17 133.3 8.2 110 340-451 66-179 (412)
203 2ca6_A RAN GTPase-activating p 99.4 2.5E-14 8.4E-19 141.8 -1.4 155 48-203 121-316 (386)
204 3txo_A PKC-L, NPKC-ETA, protei 99.4 1.2E-12 4E-17 128.1 10.5 108 340-450 28-140 (353)
205 4fr4_A YANK1, serine/threonine 99.4 1.2E-12 3.9E-17 129.5 10.6 108 340-450 20-131 (384)
206 3c0i_A Peripheral plasma membr 99.4 8.8E-13 3E-17 128.9 9.6 86 340-425 29-120 (351)
207 3a8x_A Protein kinase C IOTA t 99.4 1.7E-12 5.7E-17 126.6 11.6 108 340-450 14-126 (345)
208 1xjd_A Protein kinase C, theta 99.4 1.4E-12 4.8E-17 127.1 10.9 108 340-450 22-134 (345)
209 3soc_A Activin receptor type-2 99.4 1.9E-12 6.4E-17 124.9 11.6 108 340-453 29-140 (322)
210 2ozo_A Tyrosine-protein kinase 99.4 1.9E-12 6.4E-17 135.9 12.5 107 342-451 343-453 (613)
211 1luf_A Muscle-specific tyrosin 99.4 3.1E-12 1E-16 124.2 13.2 86 340-425 52-144 (343)
212 2w4o_A Calcium/calmodulin-depe 99.4 1.4E-12 4.7E-17 127.4 10.6 106 340-450 58-164 (349)
213 3bhy_A Death-associated protei 99.4 2.8E-12 9.6E-17 121.0 12.4 108 340-450 10-124 (283)
214 2h8h_A Proto-oncogene tyrosine 99.4 7.9E-13 2.7E-17 136.6 9.2 110 339-451 271-380 (535)
215 2a2a_A Death-associated protei 99.4 2.4E-12 8.1E-17 124.1 11.8 108 340-450 17-131 (321)
216 3eqc_A Dual specificity mitoge 99.4 9.3E-13 3.2E-17 129.0 9.0 108 341-451 39-148 (360)
217 3gni_B Strad alpha; kinase fol 99.4 2.4E-12 8.2E-17 127.5 12.0 110 340-450 30-144 (389)
218 2eva_A TAK1 kinase - TAB1 chim 99.4 2.6E-12 9E-17 123.0 11.8 107 340-451 13-119 (307)
219 3lij_A Calcium/calmodulin depe 99.4 2.5E-12 8.4E-17 131.7 12.1 108 340-450 42-152 (494)
220 3is5_A Calcium-dependent prote 99.4 3.7E-12 1.3E-16 120.5 12.5 85 340-424 27-113 (285)
221 4dc2_A Protein kinase C IOTA t 99.4 1.8E-12 6.2E-17 128.6 10.5 108 340-450 57-169 (396)
222 4e5w_A Tyrosine-protein kinase 99.4 3.2E-12 1.1E-16 121.7 11.8 86 340-425 26-119 (302)
223 3kfa_A Tyrosine-protein kinase 99.4 3.6E-12 1.2E-16 120.5 12.1 85 340-425 18-103 (288)
224 2ivs_A Proto-oncogene tyrosine 99.4 3.9E-12 1.3E-16 121.8 12.4 87 340-426 28-121 (314)
225 3goz_A Leucine-rich repeat-con 99.4 1.2E-13 4E-18 135.7 1.7 149 53-202 2-179 (362)
226 3niz_A Rhodanese family protei 99.4 2.9E-12 1E-16 122.9 11.5 108 340-450 26-135 (311)
227 2j7t_A Serine/threonine-protei 99.4 4.4E-12 1.5E-16 120.8 12.6 86 340-425 24-110 (302)
228 2yex_A Serine/threonine-protei 99.4 3.4E-12 1.2E-16 119.9 11.6 108 340-450 12-121 (276)
229 3ork_A Serine/threonine protei 99.3 1.6E-12 5.5E-17 124.7 9.5 108 340-450 17-132 (311)
230 2y94_A 5'-AMP-activated protei 99.3 2.2E-12 7.5E-17 131.0 10.9 109 340-451 21-133 (476)
231 4ejn_A RAC-alpha serine/threon 99.3 6.2E-13 2.1E-17 134.3 6.6 109 340-451 153-265 (446)
232 3nyv_A Calmodulin-domain prote 99.3 4.4E-12 1.5E-16 129.4 12.9 108 340-450 31-142 (484)
233 3q5i_A Protein kinase; CDPK, m 99.3 3.7E-12 1.3E-16 130.7 12.2 108 340-450 41-162 (504)
234 3mwu_A Calmodulin-domain prote 99.3 2.6E-12 8.9E-17 131.2 11.1 110 340-449 27-139 (486)
235 1t4h_A Serine/threonine-protei 99.3 4.3E-12 1.5E-16 120.3 11.8 109 340-451 31-146 (290)
236 2h34_A Serine/threonine-protei 99.3 5.7E-12 1.9E-16 120.7 12.7 87 340-426 39-129 (309)
237 4agu_A Cyclin-dependent kinase 99.3 4.3E-12 1.5E-16 121.4 11.8 107 340-449 8-117 (311)
238 2rku_A Serine/threonine-protei 99.3 4.1E-12 1.4E-16 120.6 11.6 108 340-450 20-131 (294)
239 2w1i_A JAK2; chromosomal rearr 99.3 4.5E-12 1.5E-16 122.4 11.9 87 340-426 46-139 (326)
240 4f0f_A Serine/threonine-protei 99.3 5.7E-12 2E-16 119.1 12.4 108 340-451 24-139 (287)
241 3kk8_A Calcium/calmodulin depe 99.3 3.7E-12 1.3E-16 120.2 11.0 87 340-426 11-100 (284)
242 2owb_A Serine/threonine-protei 99.3 3.7E-12 1.3E-16 123.6 11.2 108 340-450 46-157 (335)
243 3lxl_A Tyrosine-protein kinase 99.3 3.2E-12 1.1E-16 123.4 10.6 109 340-450 28-143 (327)
244 1u59_A Tyrosine-protein kinase 99.3 5.1E-12 1.8E-16 119.6 11.8 107 341-450 16-126 (287)
245 3dtc_A Mitogen-activated prote 99.3 3.2E-12 1.1E-16 119.8 10.3 85 340-425 12-100 (271)
246 1ob3_A PFPK5, cell division co 99.3 4E-12 1.4E-16 120.4 11.0 107 341-450 8-116 (288)
247 1t46_A HOMO sapiens V-KIT hard 99.3 4.7E-12 1.6E-16 121.2 11.6 87 340-426 28-122 (313)
248 2buj_A Serine/threonine-protei 99.3 4.5E-12 1.5E-16 121.7 11.4 85 340-424 34-123 (317)
249 2h6d_A 5'-AMP-activated protei 99.3 5E-12 1.7E-16 118.8 11.4 87 340-426 16-106 (276)
250 1x8b_A WEE1HU, WEE1-like prote 99.3 5.3E-12 1.8E-16 119.0 11.7 86 340-425 16-105 (289)
251 2r5t_A Serine/threonine-protei 99.3 3.1E-12 1E-16 126.0 10.3 108 340-450 43-155 (373)
252 3vhe_A Vascular endothelial gr 99.3 3.4E-12 1.2E-16 124.8 10.6 87 340-426 27-122 (359)
253 3gbz_A Kinase, CMGC CDK; ssgci 99.3 5.7E-12 1.9E-16 121.9 12.0 107 340-450 39-148 (329)
254 3e7e_A HBUB1, BUB1A, mitotic c 99.3 2.1E-12 7.3E-17 126.8 9.1 109 340-451 70-189 (365)
255 1mqb_A Ephrin type-A receptor 99.3 4.9E-12 1.7E-16 122.6 11.5 109 340-450 49-163 (333)
256 3hko_A Calcium/calmodulin-depe 99.3 2E-12 7E-17 125.6 8.8 92 332-423 21-120 (345)
257 2i0e_A Protein kinase C-beta I 99.3 3.7E-12 1.3E-16 124.5 10.4 108 340-450 25-137 (353)
258 1phk_A Phosphorylase kinase; g 99.3 4.9E-12 1.7E-16 120.2 11.1 87 340-426 22-119 (298)
259 1zy4_A Serine/threonine-protei 99.3 3.5E-12 1.2E-16 121.2 10.0 86 340-426 11-110 (303)
260 3i6u_A CDS1, serine/threonine- 99.3 3.6E-12 1.2E-16 127.6 10.6 107 340-450 140-255 (419)
261 3cok_A Serine/threonine-protei 99.3 5.6E-12 1.9E-16 118.6 11.2 86 340-425 16-105 (278)
262 3h4j_B AMPK kdaid, SNF1-like p 99.3 3.1E-12 1.1E-16 124.2 9.6 106 340-449 14-123 (336)
263 2qr7_A Ribosomal protein S6 ki 99.3 2.6E-12 9E-17 125.0 9.1 104 340-450 27-132 (342)
264 3c1x_A Hepatocyte growth facto 99.3 4.4E-12 1.5E-16 125.0 10.8 109 340-450 94-208 (373)
265 2yfx_A Tyrosine-protein kinase 99.3 4.3E-12 1.5E-16 122.5 10.5 87 340-426 35-128 (327)
266 2pvf_A Fibroblast growth facto 99.3 7.4E-12 2.5E-16 121.3 12.2 87 340-426 40-136 (334)
267 3pls_A Macrophage-stimulating 99.3 6E-12 2E-16 119.6 11.3 109 340-450 26-140 (298)
268 3fdn_A Serine/threonine-protei 99.3 4.1E-12 1.4E-16 119.7 10.1 108 340-450 14-125 (279)
269 2pmi_A Negative RE, cyclin-dep 99.3 6.8E-12 2.3E-16 120.7 11.7 85 340-425 10-96 (317)
270 1qpc_A LCK kinase; alpha beta 99.3 6.1E-12 2.1E-16 118.4 11.1 84 340-425 18-101 (279)
271 3o0g_A Cell division protein k 99.3 8.4E-12 2.9E-16 118.4 12.1 107 341-450 8-117 (292)
272 1u5q_A Serine/threonine protei 99.3 4.9E-12 1.7E-16 123.5 10.7 85 340-425 59-147 (348)
273 1p4o_A Insulin-like growth fac 99.3 3.5E-12 1.2E-16 122.7 9.4 86 340-425 30-122 (322)
274 4fl3_A Tyrosine-protein kinase 99.3 7E-12 2.4E-16 132.0 12.5 106 341-450 375-485 (635)
275 3a7i_A MST3 kinase, serine/thr 99.3 9.3E-12 3.2E-16 118.7 12.3 86 340-425 27-114 (303)
276 2eue_A Carbon catabolite derep 99.3 1.2E-11 4E-16 116.3 12.7 85 341-426 19-107 (275)
277 2vgo_A Serine/threonine-protei 99.3 4.8E-12 1.6E-16 119.5 10.0 108 340-450 19-130 (284)
278 1mp8_A Focal adhesion kinase 1 99.3 9.5E-12 3.3E-16 117.3 12.0 86 340-426 20-110 (281)
279 3tt0_A Basic fibroblast growth 99.3 8.8E-12 3E-16 123.2 12.2 87 340-426 74-170 (382)
280 2zv2_A Calcium/calmodulin-depe 99.3 4.6E-12 1.6E-16 120.6 9.7 107 340-450 18-153 (298)
281 2ycf_A Serine/threonine-protei 99.3 6.6E-12 2.3E-16 120.9 10.8 107 340-450 15-130 (322)
282 2wei_A Calmodulin-domain prote 99.3 1.1E-11 3.7E-16 117.3 12.0 87 340-426 27-116 (287)
283 2acx_A G protein-coupled recep 99.3 5.2E-12 1.8E-16 130.5 10.6 110 341-451 190-303 (576)
284 2wqm_A Serine/threonine-protei 99.3 1.7E-11 6E-16 117.2 13.6 85 340-424 37-125 (310)
285 1xbb_A Tyrosine-protein kinase 99.3 9.4E-12 3.2E-16 118.0 11.6 106 341-450 23-133 (291)
286 3c4z_A Rhodopsin kinase; Ser/T 99.3 6.3E-12 2.2E-16 129.4 10.7 111 341-451 191-306 (543)
287 3f66_A Hepatocyte growth facto 99.3 1.1E-11 3.6E-16 118.0 11.4 87 340-426 30-122 (298)
288 2vwi_A Serine/threonine-protei 99.3 7E-12 2.4E-16 119.3 10.1 85 340-424 20-106 (303)
289 3lxp_A Non-receptor tyrosine-p 99.3 1.6E-11 5.4E-16 118.1 12.7 87 340-426 36-130 (318)
290 4aaa_A Cyclin-dependent kinase 99.3 1.1E-11 3.9E-16 119.8 11.7 108 340-450 30-140 (331)
291 1rjb_A FL cytokine receptor; k 99.3 8.4E-12 2.9E-16 121.3 10.8 88 339-426 49-144 (344)
292 2pml_X PFPK7, Ser/Thr protein 99.3 4.6E-12 1.6E-16 123.3 8.8 108 340-451 36-168 (348)
293 2w5a_A Serine/threonine-protei 99.3 8.4E-12 2.9E-16 117.4 10.3 86 340-425 11-101 (279)
294 3poz_A Epidermal growth factor 99.3 9E-12 3.1E-16 120.4 10.5 109 340-451 20-134 (327)
295 2vuw_A Serine/threonine-protei 99.3 9.7E-13 3.3E-17 127.7 3.4 109 338-451 23-178 (336)
296 1fvr_A Tyrosine-protein kinase 99.3 1.5E-11 5E-16 118.8 11.7 88 339-426 29-121 (327)
297 3com_A Serine/threonine-protei 99.3 1.8E-11 6.2E-16 117.3 12.1 83 340-424 34-117 (314)
298 2i1m_A Macrophage colony-stimu 99.3 7.2E-12 2.5E-16 121.2 9.2 86 340-425 51-144 (333)
299 3gxj_A TGF-beta receptor type- 99.3 7.3E-12 2.5E-16 119.2 8.7 104 340-451 8-117 (303)
300 3dls_A PAS domain-containing s 99.3 9.4E-12 3.2E-16 120.7 9.6 108 340-450 29-146 (335)
301 3q4u_A Activin receptor type-1 99.3 1.5E-11 5.2E-16 116.9 10.6 104 340-451 13-122 (301)
302 2izr_A Casein kinase I isoform 99.3 9.3E-12 3.2E-16 120.4 9.3 107 340-451 14-122 (330)
303 3rp9_A Mitogen-activated prote 99.3 1.4E-11 4.9E-16 124.7 11.0 107 340-450 58-172 (458)
304 3qup_A Tyrosine-protein kinase 99.3 2E-11 6.8E-16 117.5 11.3 111 340-450 28-153 (323)
305 2y7j_A Phosphorylase B kinase 99.3 1.5E-11 5.3E-16 120.7 10.6 106 341-449 100-215 (365)
306 2xir_A Vascular endothelial gr 99.3 1.7E-11 5.9E-16 117.4 10.7 87 340-426 32-127 (316)
307 2i6l_A Mitogen-activated prote 99.3 2.5E-11 8.4E-16 116.4 11.7 106 340-450 16-136 (320)
308 3n9x_A Phosphotransferase; mal 99.3 2E-11 6.8E-16 122.7 11.4 106 340-449 31-144 (432)
309 1vzo_A Ribosomal protein S6 ki 99.2 7.6E-12 2.6E-16 122.4 8.0 108 340-450 59-175 (355)
310 2x7f_A TRAF2 and NCK-interacti 99.2 2.7E-11 9.1E-16 116.7 11.3 109 340-450 29-145 (326)
311 3lb7_A RAF proto-oncogene seri 99.2 3.3E-11 1.1E-15 115.4 11.8 106 340-450 41-148 (307)
312 3an0_A Dual specificity mitoge 99.2 2.7E-11 9.3E-16 117.5 11.4 112 340-452 56-171 (340)
313 3dbq_A Dual specificity protei 99.2 3.3E-11 1.1E-15 117.2 11.9 107 340-450 14-124 (343)
314 3mtl_A Cell division protein k 99.2 6.6E-12 2.2E-16 121.2 6.8 107 341-450 8-116 (324)
315 3llt_A Serine/threonine kinase 99.2 2E-11 6.9E-16 119.4 10.2 108 340-450 40-153 (360)
316 2r3i_A Cell division protein k 99.2 4.8E-11 1.6E-15 113.4 12.5 109 340-450 8-119 (299)
317 3p1a_A MYT1 kinase, membrane-a 99.2 2.5E-11 8.7E-16 116.3 10.5 106 340-450 62-173 (311)
318 3lm5_A Serine/threonine-protei 99.2 2.8E-11 9.6E-16 116.9 10.9 110 340-450 34-147 (327)
319 1cm8_A Phosphorylated MAP kina 99.2 2.9E-11 1E-15 118.8 11.1 105 340-449 30-143 (367)
320 3mdy_A Bone morphogenetic prot 99.2 3.3E-11 1.1E-15 116.5 11.0 105 340-452 42-152 (337)
321 3ll6_A Cyclin G-associated kin 99.2 1.7E-11 5.7E-16 118.5 8.8 111 340-451 33-153 (337)
322 2zmd_A Dual specificity protei 99.2 4.6E-11 1.6E-15 118.4 12.2 108 340-451 61-172 (390)
323 1z7x_W Ribonuclease inhibitor; 99.2 1.7E-13 6E-18 138.6 -5.5 154 49-202 227-410 (461)
324 1b6c_B TGF-B superfamily recep 99.2 3.8E-11 1.3E-15 116.4 11.3 104 340-451 47-156 (342)
325 1byg_A CSK, protein (C-termina 99.2 3.2E-11 1.1E-15 113.5 10.5 83 340-425 26-109 (278)
326 3og7_A AKAP9-BRAF fusion prote 99.2 3E-11 1E-15 114.5 10.2 106 340-450 29-136 (289)
327 3brb_A Proto-oncogene tyrosine 99.2 5.5E-11 1.9E-15 113.9 12.2 112 340-451 39-164 (313)
328 2a19_B Interferon-induced, dou 99.2 2.8E-11 9.4E-16 114.0 9.8 104 340-450 16-138 (284)
329 3pg1_A Mitogen-activated prote 99.2 3.1E-11 1.1E-15 118.2 10.3 86 340-426 27-128 (362)
330 3fme_A Dual specificity mitoge 99.2 5.7E-11 1.9E-15 112.3 11.6 112 340-452 12-127 (290)
331 3cc6_A Protein tyrosine kinase 99.2 7E-11 2.4E-15 111.3 12.1 86 340-426 17-107 (281)
332 1z7x_W Ribonuclease inhibitor; 99.2 1.3E-13 4.4E-18 139.6 -7.4 154 48-202 198-382 (461)
333 2j0j_A Focal adhesion kinase 1 99.2 5.1E-11 1.8E-15 125.8 12.2 109 340-451 395-508 (656)
334 3m2w_A MAP kinase-activated pr 99.2 3.3E-11 1.1E-15 114.8 9.7 104 341-450 24-133 (299)
335 3lzb_A Epidermal growth factor 99.2 4.8E-11 1.6E-15 115.3 10.9 108 340-450 20-133 (327)
336 1nxk_A MAP kinase-activated pr 99.2 2.9E-11 1E-15 120.2 9.7 104 341-450 68-177 (400)
337 3kex_A Receptor tyrosine-prote 99.2 3.4E-11 1.2E-15 116.1 9.9 85 340-425 18-108 (325)
338 1ua2_A CAK, cell division prot 99.2 6.6E-11 2.2E-15 115.2 11.7 109 340-449 15-130 (346)
339 2wtk_C Serine/threonine-protei 99.2 4.7E-11 1.6E-15 113.8 10.5 109 340-450 10-125 (305)
340 3mi9_A Cell division protein k 99.2 6E-11 2.1E-15 115.6 11.4 108 340-450 22-140 (351)
341 3pfq_A PKC-B, PKC-beta, protei 99.2 4E-11 1.4E-15 127.0 10.9 108 340-450 346-458 (674)
342 3sb4_A Hypothetical leucine ri 99.2 5.2E-11 1.8E-15 115.1 10.3 132 49-184 101-314 (329)
343 3ttj_A Mitogen-activated prote 99.2 5.9E-11 2E-15 120.3 11.0 105 340-450 67-180 (464)
344 3oz6_A Mitogen-activated prote 99.2 6.9E-11 2.4E-15 116.9 11.3 106 340-450 14-125 (388)
345 3nsz_A CK II alpha, casein kin 99.2 1.1E-10 3.8E-15 112.5 12.3 82 340-424 41-126 (330)
346 3rgf_A Cyclin-dependent kinase 99.2 3.7E-11 1.3E-15 119.7 8.9 90 332-424 18-112 (405)
347 3byv_A Rhoptry kinase; malaria 99.2 1.7E-11 5.7E-16 120.9 6.3 110 340-450 78-222 (377)
348 1u46_A ACK-1, activated CDC42 99.2 5E-11 1.7E-15 112.7 9.2 85 340-425 23-114 (291)
349 1csn_A Casein kinase-1; phosph 99.2 7.1E-11 2.4E-15 112.0 10.2 107 340-451 15-123 (298)
350 2pzi_A Probable serine/threoni 99.2 3.9E-11 1.3E-15 127.6 9.1 107 340-451 85-199 (681)
351 2fst_X Mitogen-activated prote 99.2 8.9E-11 3E-15 115.3 10.9 106 340-450 34-148 (367)
352 3qyz_A Mitogen-activated prote 99.2 1E-10 3.4E-15 114.7 11.1 106 340-450 32-144 (364)
353 3g2f_A Bone morphogenetic prot 99.2 5.2E-11 1.8E-15 115.2 8.8 106 340-453 18-130 (336)
354 3qa8_A MGC80376 protein; kinas 99.2 3.8E-11 1.3E-15 125.6 8.1 87 340-426 19-113 (676)
355 2xrw_A Mitogen-activated prote 99.2 1.5E-10 5.2E-15 113.8 12.0 105 340-450 30-143 (371)
356 2iwi_A Serine/threonine-protei 99.2 3E-11 1E-15 115.7 6.5 87 340-426 36-134 (312)
357 2b9h_A MAP kinase FUS3, mitoge 99.1 1.4E-10 4.8E-15 112.9 11.4 106 340-450 16-128 (353)
358 3un9_A NLR family member X1; l 99.1 8.4E-13 2.9E-17 129.9 -4.5 152 49-201 72-250 (372)
359 2y4i_B KSR2, HKSR2, kinase sup 99.1 4.7E-11 1.6E-15 114.5 7.6 85 340-426 38-124 (319)
360 3coi_A Mitogen-activated prote 99.1 1.8E-10 6.1E-15 112.4 11.3 84 340-424 29-121 (353)
361 3cek_A Dual specificity protei 99.1 1.9E-10 6.5E-15 110.1 11.2 107 340-450 33-143 (313)
362 4exu_A Mitogen-activated prote 99.1 2.1E-10 7.3E-15 112.7 11.7 85 340-425 47-140 (371)
363 3g33_A Cell division protein k 99.1 2.8E-10 9.6E-15 108.7 11.7 109 340-450 14-136 (308)
364 1wak_A Serine/threonine-protei 99.1 6.5E-11 2.2E-15 117.1 7.3 110 340-452 42-164 (397)
365 3op5_A Serine/threonine-protei 99.1 1.3E-10 4.5E-15 113.9 9.3 109 340-451 40-169 (364)
366 3eb0_A Putative uncharacterize 99.1 2.1E-10 7.1E-15 113.3 10.5 107 340-451 12-158 (383)
367 3aln_A Dual specificity mitoge 99.1 4E-10 1.4E-14 108.5 12.0 84 340-424 27-113 (327)
368 3kvw_A DYRK2, dual specificity 99.1 2.2E-10 7.4E-15 115.0 10.4 108 340-450 102-216 (429)
369 2v62_A Serine/threonine-protei 99.1 1.4E-10 4.7E-15 112.9 8.6 107 340-450 42-167 (345)
370 1j1b_A Glycogen synthase kinas 99.1 7.1E-11 2.4E-15 118.2 6.6 107 340-451 59-173 (420)
371 3un9_A NLR family member X1; l 99.1 1.1E-12 3.7E-17 129.1 -6.5 134 49-182 101-254 (372)
372 3e3p_A Protein kinase, putativ 99.1 1.7E-10 5.7E-15 112.7 9.0 110 340-451 28-146 (360)
373 2dyl_A Dual specificity mitoge 99.1 2.1E-10 7.1E-15 109.9 9.5 109 340-451 30-141 (318)
374 2rio_A Serine/threonine-protei 99.1 2.6E-10 8.7E-15 114.7 10.4 83 340-426 20-103 (434)
375 1q8y_A SR protein kinase; tran 99.1 1.2E-10 4E-15 114.3 6.9 110 340-452 24-149 (373)
376 3p23_A Serine/threonine-protei 99.1 3.1E-10 1.1E-14 113.9 9.9 83 340-426 29-112 (432)
377 3fhr_A MAP kinase-activated pr 99.1 4.1E-10 1.4E-14 109.1 10.5 82 340-426 34-121 (336)
378 1blx_A Cyclin-dependent kinase 99.1 3.1E-10 1.1E-14 109.2 9.3 109 340-450 16-136 (326)
379 2jii_A Serine/threonine-protei 99.1 1.4E-10 4.7E-15 113.1 6.7 104 340-450 47-175 (352)
380 4e7w_A Glycogen synthase kinas 99.1 2.7E-10 9.2E-15 113.0 8.5 107 340-451 45-158 (394)
381 3uzp_A CKI-delta, CKID, casein 99.0 5.8E-10 2E-14 105.6 9.7 106 340-450 14-121 (296)
382 3a99_A Proto-oncogene serine/t 99.0 2.6E-10 8.7E-15 109.7 7.2 107 340-449 48-164 (320)
383 1z57_A Dual specificity protei 99.0 4.3E-10 1.5E-14 108.4 8.9 109 340-451 19-135 (339)
384 3q60_A ROP5B; pseudokinase, tr 99.0 7.2E-10 2.5E-14 108.9 9.5 84 340-425 67-181 (371)
385 4hgt_A Casein kinase I isoform 99.0 7.1E-10 2.4E-14 104.9 9.2 106 340-450 14-121 (296)
386 2vx3_A Dual specificity tyrosi 99.0 7.7E-10 2.6E-14 109.2 9.6 109 340-451 59-174 (382)
387 3en9_A Glycoprotease, O-sialog 99.0 1.3E-09 4.3E-14 112.5 10.2 84 340-424 341-432 (540)
388 3sv0_A Casein kinase I-like; t 99.0 1.4E-09 4.9E-14 110.5 10.2 107 340-451 12-120 (483)
389 2eu9_A Dual specificity protei 99.0 1.2E-09 4E-14 106.2 8.5 109 340-451 24-140 (355)
390 3sb4_A Hypothetical leucine ri 98.9 1.3E-09 4.6E-14 105.1 7.9 99 73-173 225-327 (329)
391 1zar_A RIO2 kinase; serine kin 98.9 5E-09 1.7E-13 98.9 9.8 76 341-420 96-189 (282)
392 3rw6_A Nuclear RNA export fact 98.9 6E-11 2E-15 110.3 -3.4 145 37-184 77-237 (267)
393 4azs_A Methyltransferase WBDD; 98.9 2.1E-09 7E-14 111.6 7.7 103 343-451 242-356 (569)
394 3ogk_B Coronatine-insensitive 98.8 1.3E-10 4.5E-15 121.3 -3.0 153 49-201 342-524 (592)
395 3ogk_B Coronatine-insensitive 98.8 1.4E-10 4.9E-15 121.0 -4.5 152 49-201 318-499 (592)
396 4fdw_A Leucine rich hypothetic 98.6 1.6E-07 5.6E-12 93.0 11.9 125 50-181 181-313 (401)
397 2p1m_B Transport inhibitor res 98.6 8E-10 2.7E-14 115.3 -5.3 153 49-202 338-518 (594)
398 4fdw_A Leucine rich hypothetic 98.6 1.9E-07 6.6E-12 92.4 10.9 129 49-184 226-362 (401)
399 2p1m_B Transport inhibitor res 98.6 2.9E-09 1E-13 111.0 -2.6 152 49-202 314-493 (594)
400 3rw6_A Nuclear RNA export fact 98.6 5.6E-09 1.9E-13 97.0 -0.6 102 70-173 137-257 (267)
401 1io0_A Tropomodulin; LRR prote 98.5 4.3E-09 1.5E-13 92.7 -2.5 110 47-157 34-163 (185)
402 1io0_A Tropomodulin; LRR prote 98.5 7.1E-09 2.4E-13 91.3 -1.5 114 68-181 30-165 (185)
403 2ra8_A Uncharacterized protein 98.5 2.8E-08 9.5E-13 96.9 2.4 149 49-201 139-318 (362)
404 2ra8_A Uncharacterized protein 98.5 5.5E-08 1.9E-12 94.8 4.1 129 49-181 172-321 (362)
405 1zth_A RIO1 serine protein kin 98.5 1.3E-07 4.3E-12 87.9 6.1 80 340-423 52-165 (258)
406 3dzo_A Rhoptry kinase domain; 98.4 3.5E-07 1.2E-11 91.0 7.4 111 340-451 83-228 (413)
407 4gyi_A RIO2 kinase; protein ki 98.3 5.7E-07 1.9E-11 87.8 5.2 82 340-423 100-203 (397)
408 4gt6_A Cell surface protein; l 97.8 4.6E-05 1.6E-09 75.0 9.5 112 64-179 255-369 (394)
409 3e4g_A ATP synthase subunit S, 97.8 2.8E-06 9.4E-11 73.4 0.2 81 50-131 62-149 (176)
410 3e4g_A ATP synthase subunit S, 97.7 1.1E-05 3.8E-10 69.6 2.1 85 74-158 61-153 (176)
411 4h09_A Hypothetical leucine ri 97.6 0.00015 5.1E-09 70.8 9.5 88 65-154 231-319 (379)
412 3tm0_A Aminoglycoside 3'-phosp 97.6 0.0003 1E-08 64.8 10.2 103 341-449 20-123 (263)
413 4h09_A Hypothetical leucine ri 97.6 0.00017 5.8E-09 70.4 8.8 103 49-155 240-343 (379)
414 4gt6_A Cell surface protein; l 97.5 0.00029 9.9E-09 69.3 9.3 89 65-156 279-368 (394)
415 3d1u_A Putative fructosamine-3 97.5 0.00042 1.4E-08 65.1 9.8 74 341-418 21-97 (288)
416 4fs7_A Uncharacterized protein 97.4 0.00048 1.6E-08 67.7 10.2 121 49-175 230-374 (394)
417 4fs7_A Uncharacterized protein 97.4 0.00023 7.8E-09 70.0 7.3 99 50-155 277-376 (394)
418 3rfe_A Platelet glycoprotein I 97.2 0.00041 1.4E-08 56.8 5.9 35 123-157 33-67 (130)
419 3rfe_A Platelet glycoprotein I 97.2 0.0004 1.4E-08 56.8 5.6 37 98-134 32-68 (130)
420 1pgv_A TMD-1, tropomodulin TMD 97.2 6E-05 2E-09 66.2 0.3 85 46-131 38-136 (197)
421 1nd4_A Aminoglycoside 3'-phosp 97.1 0.0011 3.8E-08 60.5 7.9 73 344-419 29-103 (264)
422 1pgv_A TMD-1, tropomodulin TMD 97.0 5.7E-05 2E-09 66.3 -1.8 112 69-180 36-170 (197)
423 3dxp_A Putative acyl-COA dehyd 96.5 0.0061 2.1E-07 58.8 8.4 79 341-420 44-130 (359)
424 4gkh_A Aminoglycoside 3'-phosp 95.5 0.09 3.1E-06 48.0 11.0 103 342-451 31-136 (272)
425 3f7w_A Putative fructosamine-3 94.5 0.063 2.2E-06 49.8 6.9 73 341-417 21-96 (288)
426 3r70_A Aminoglycoside phosphot 93.9 0.13 4.6E-06 48.4 8.0 100 341-452 43-146 (320)
427 3tdw_A Gentamicin resistance p 92.9 0.34 1.2E-05 45.3 8.8 75 341-421 25-103 (306)
428 3jr1_A Putative fructosamine-3 92.6 0.24 8.3E-06 46.6 7.3 73 342-418 43-118 (312)
429 3ovc_A Hygromycin-B 4-O-kinase 92.1 0.48 1.6E-05 45.5 8.9 99 341-452 47-148 (362)
430 2olc_A MTR kinase, methylthior 91.3 0.21 7.2E-06 48.5 5.5 75 341-417 36-121 (397)
431 3ats_A Putative uncharacterize 90.6 0.22 7.6E-06 47.5 4.8 80 342-421 27-123 (357)
432 3sg8_A APH(2'')-ID; antibiotic 90.4 0.44 1.5E-05 44.3 6.6 77 341-423 26-108 (304)
433 3cxl_A N-chimerin; SH2, RHO-GA 84.6 0.12 3.9E-06 51.8 -1.5 53 348-400 152-213 (463)
434 2q83_A YTAA protein; 2635576, 80.6 2.8 9.7E-05 39.1 6.7 72 342-418 39-118 (346)
435 2lz0_A Uncharacterized protein 74.7 8.1 0.00028 29.2 6.4 42 64-106 10-52 (100)
436 1zyl_A Hypothetical protein YI 72.8 6.8 0.00023 36.3 6.9 74 343-418 34-114 (328)
437 1nw1_A Choline kinase (49.2 KD 72.0 7.4 0.00025 38.0 7.1 71 342-418 80-159 (429)
438 3feg_A Choline/ethanolamine ki 70.5 14 0.00047 35.5 8.5 73 342-419 57-138 (379)
439 2pyw_A Uncharacterized protein 68.7 17 0.00057 35.2 8.9 79 341-422 40-130 (420)
440 3csv_A Aminoglycoside phosphot 66.9 39 0.0013 31.1 10.8 78 343-425 26-106 (333)
441 2lz0_A Uncharacterized protein 63.6 18 0.0006 27.3 6.2 45 85-130 7-52 (100)
442 3dxq_A Choline/ethanolamine ki 52.6 14 0.00049 33.7 4.8 71 341-419 24-96 (301)
443 2ppq_A HSK, HK, homoserine kin 47.8 16 0.00054 33.6 4.3 74 342-418 29-110 (322)
444 2qg7_A Ethanolamine kinase PV0 45.7 47 0.0016 32.6 7.5 72 342-418 115-188 (458)
445 3c5i_A Choline kinase; choline 44.0 30 0.001 32.5 5.8 72 342-418 40-121 (369)
446 2klu_A T-cell surface glycopro 37.1 5 0.00017 27.5 -0.8 20 243-262 13-32 (70)
447 3i1a_A Spectinomycin phosphotr 35.9 1.4E+02 0.0049 27.4 9.0 68 344-418 32-108 (339)
448 3mes_A Choline kinase; malaria 31.9 1.2E+02 0.004 29.4 7.7 72 342-418 77-157 (424)
449 3f2s_A CK, chetk-alpha, cholin 28.8 1.5E+02 0.0053 28.3 8.0 72 343-418 60-158 (401)
No 1
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.95 E-value=2.3e-27 Score=229.29 Aligned_cols=190 Identities=33% Similarity=0.574 Sum_probs=167.4
Q ss_pred CChhhHHHHHHhHhcC-CCCCCCCCCCCCCCCCcc--cccceecCC----CcEeEEEeCCCCCcc--ccChhhhcCCCCC
Q 012745 6 SRSGDTEALLSLKSSL-DPFNRLSSWKNGDRDVCK--WQGIKECLN----GRVTKLVLEHLNLTG--TLDEKVINQLDQL 76 (457)
Q Consensus 6 ~~~~~~~~l~~~~~~~-~~~~~l~~w~~~~~~~c~--~~gv~~c~~----~~l~~L~L~~n~l~~--~l~~~~~~~l~~L 76 (457)
+..+|..||++||+++ ++. .+++|... .+||. |.||. |.. .+|++|+|++|+++| .+|+ .|..+++|
T Consensus 3 c~~~~~~aL~~~k~~~~~~~-~l~~W~~~-~~~C~~~w~gv~-C~~~~~~~~l~~L~L~~~~l~~~~~~~~-~l~~l~~L 78 (313)
T 1ogq_A 3 CNPQDKQALLQIKKDLGNPT-TLSSWLPT-TDCCNRTWLGVL-CDTDTQTYRVNNLDLSGLNLPKPYPIPS-SLANLPYL 78 (313)
T ss_dssp SCHHHHHHHHHHHHHTTCCG-GGTTCCTT-SCTTTTCSTTEE-ECCSSSCCCEEEEEEECCCCSSCEECCG-GGGGCTTC
T ss_pred CCHHHHHHHHHHHHhcCCcc-cccCCCCC-CCCCcCCCcceE-eCCCCCCceEEEEECCCCCccCCcccCh-hHhCCCCC
Confidence 5678999999999999 444 68899654 46777 99999 875 689999999999998 7886 89999999
Q ss_pred CEEEeec-CcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccCCCccceeeccc
Q 012745 77 RVLSFKG-NSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQD 154 (457)
Q Consensus 77 ~~L~L~~-N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 154 (457)
++|+|++ |.+.+..| .|.++++|++|+|++|++++.+|..|..+++|++|+|++|.+++.+|..|..+++|++|+|++
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 158 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcC
Confidence 9999995 99998888 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCC--CCC-CCcEEEeecCcceecCCCchhhhc--cCccccccCc
Q 012745 155 NKFTGPIPPF--NQT-NLRFFNVSNNDLSGQIPVTPALVR--FNASSFLLNI 201 (457)
Q Consensus 155 N~l~~~~~~~--~~~-~L~~L~l~~N~l~~~~p~~~~l~~--l~~~~~~~n~ 201 (457)
|+|++.+|.. .++ +|+.|++++|++++.+| ..+.. +..+.+.+|.
T Consensus 159 N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~--~~~~~l~L~~L~Ls~N~ 208 (313)
T 1ogq_A 159 NRISGAIPDSYGSFSKLFTSMTISRNRLTGKIP--PTFANLNLAFVDLSRNM 208 (313)
T ss_dssp SCCEEECCGGGGCCCTTCCEEECCSSEEEEECC--GGGGGCCCSEEECCSSE
T ss_pred CcccCcCCHHHhhhhhcCcEEECcCCeeeccCC--hHHhCCcccEEECcCCc
Confidence 9999777765 666 99999999999998888 33333 5666666665
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.92 E-value=4.2e-25 Score=238.66 Aligned_cols=194 Identities=25% Similarity=0.320 Sum_probs=154.0
Q ss_pred cCChhhHHHHHHhHhcC-CCCCCCCCCCCCCCCCcccccceecCCCcEeEEEeCCCCCccc---cCh-------------
Q 012745 5 VSRSGDTEALLSLKSSL-DPFNRLSSWKNGDRDVCKWQGIKECLNGRVTKLVLEHLNLTGT---LDE------------- 67 (457)
Q Consensus 5 ~~~~~~~~~l~~~~~~~-~~~~~l~~w~~~~~~~c~~~gv~~c~~~~l~~L~L~~n~l~~~---l~~------------- 67 (457)
.+.++|..||++||+++ ||. .+++|... .+||.|.||. |..++|+.|+|+++.+.|. +|+
T Consensus 8 ~~~~~~~~all~~k~~~~~~~-~l~~W~~~-~~~C~w~gv~-C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~ 84 (768)
T 3rgz_A 8 QSLYREIHQLISFKDVLPDKN-LLPDWSSN-KNPCTFDGVT-CRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFL 84 (768)
T ss_dssp CCHHHHHHHHHHHHTTCSCTT-SSTTCCTT-SCGGGSTTEE-EETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEEC
T ss_pred cCCHHHHHHHHHHHhhCCCcc-cccCCCCC-CCCcCCcceE-ECCCcEEEEECCCCCcCCccCccChhHhccCcccccCC
Confidence 45678999999999999 666 89999743 5899999999 9888999999999999987 554
Q ss_pred ---------hhhcCCCCCCEEEeecCcccccCC---CCcCCCCCcEEEccCCccccCCCccC-CCCCCCCEEEeeccccC
Q 012745 68 ---------KVINQLDQLRVLSFKGNSISGQIP---NLLGLVNLKSLYLNDNNFSGKFPGSL-SSLHRLKIIVLANNQIS 134 (457)
Q Consensus 68 ---------~~~~~l~~L~~L~L~~N~l~~~~~---~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~ 134 (457)
..|..+++|++|+|++|.+++.+| .+.++++|++|+|++|.+++..|..+ .++++|++|+|++|+++
T Consensus 85 ~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~ 164 (768)
T 3rgz_A 85 SNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSIS 164 (768)
T ss_dssp TTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCE
T ss_pred cCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccC
Confidence 356777888888888888887554 57778888888888888887777665 77888888888888888
Q ss_pred CCCccc---ccCCCccceeecccccccCCCCCCCCCCCcEEEeecCcceecCCCchhhhccCccccccCc
Q 012745 135 GPIPES---LSNLKRLYMLYLQDNKFTGPIPPFNQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNI 201 (457)
Q Consensus 135 ~~~p~~---~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~ 201 (457)
+..|.. +.++++|++|++++|.+++..+...+++|++|+|++|.+++.+|.+..+.++..+.+.+|.
T Consensus 165 ~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~ 234 (768)
T 3rgz_A 165 GANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNK 234 (768)
T ss_dssp EETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSC
T ss_pred CcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCc
Confidence 777666 6777888888888888877666667788888888888888877766666666666666665
No 3
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.91 E-value=9.1e-25 Score=212.36 Aligned_cols=198 Identities=18% Similarity=0.230 Sum_probs=168.8
Q ss_pred CCccCChhhHHHHHHhHhcC--CCCCCCCCCC---CCCCCCcccccceecC----------CCcEeEEEeCCCCCccccC
Q 012745 2 EPLVSRSGDTEALLSLKSSL--DPFNRLSSWK---NGDRDVCKWQGIKECL----------NGRVTKLVLEHLNLTGTLD 66 (457)
Q Consensus 2 ~~~~~~~~~~~~l~~~~~~~--~~~~~l~~w~---~~~~~~c~~~gv~~c~----------~~~l~~L~L~~n~l~~~l~ 66 (457)
|...+..+|..||++||+++ ++.+.+.+|. ..+.++|.|.|+. |. .++|+.|+|++|+++ .+|
T Consensus 20 ~~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~-~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp 97 (328)
T 4fcg_A 20 QGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRA-LKATADLLEDATQPGRVALELRSVPLP-QFP 97 (328)
T ss_dssp C--CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHH-HHHHHHHHHHHTSTTCCEEEEESSCCS-SCC
T ss_pred eccccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcc-hhhhHHHHhcccccceeEEEccCCCch-hcC
Confidence 34456778999999999988 5555567884 3445799999998 74 278999999999999 998
Q ss_pred hhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccC---
Q 012745 67 EKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSN--- 143 (457)
Q Consensus 67 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--- 143 (457)
+ .+..+++|++|+|++|.|+.++..+.++++|++|+|++|+|+ .+|..|..+++|++|+|++|++.+.+|..+..
T Consensus 98 ~-~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~ 175 (328)
T 4fcg_A 98 D-QAFRLSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDA 175 (328)
T ss_dssp S-CGGGGTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-
T ss_pred h-hhhhCCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccc
Confidence 7 677899999999999999955558999999999999999999 78999999999999999999998899988765
Q ss_pred ------CCccceeecccccccCCCCCC-CCCCCcEEEeecCcceecCCCchhhhccCccccccCcCc
Q 012745 144 ------LKRLYMLYLQDNKFTGPIPPF-NQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNINL 203 (457)
Q Consensus 144 ------l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~~ 203 (457)
+++|++|+|++|+|+..+... .+++|+.|+|++|++++.++.+..+.++..+.+.+|...
T Consensus 176 ~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~ 242 (328)
T 4fcg_A 176 SGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTAL 242 (328)
T ss_dssp CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTC
T ss_pred hhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcch
Confidence 999999999999999443333 789999999999999988777777788888888887654
No 4
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.89 E-value=4.4e-24 Score=230.92 Aligned_cols=190 Identities=25% Similarity=0.380 Sum_probs=156.0
Q ss_pred CChhhHHHHHHhHhcCCCCCCCCCCCCCC----CCC--ccc------------ccceecCC-CcEeEEEeCCCCCccccC
Q 012745 6 SRSGDTEALLSLKSSLDPFNRLSSWKNGD----RDV--CKW------------QGIKECLN-GRVTKLVLEHLNLTGTLD 66 (457)
Q Consensus 6 ~~~~~~~~l~~~~~~~~~~~~l~~w~~~~----~~~--c~~------------~gv~~c~~-~~l~~L~L~~n~l~~~l~ 66 (457)
....|..||++||++++.. +|+..+ .+| |.| .||. |.. .+|+.|+|++|++.|.+|
T Consensus 266 ~~~~d~~ALl~~k~~l~~~----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~-C~~~~~V~~L~Ls~~~L~G~ip 340 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALDGK----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVD-LDNNGRVTGLSLAGFGAKGRVP 340 (876)
T ss_dssp HHHHHHHHHHHHHHHTTGG----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEE-ECTTSCEEEEECTTTCCEEEEC
T ss_pred cchHHHHHHHHHHHHcCCC----CCCcCCCcccccCCccccccccccccccCcCceE-ecCCCCEEEEECccCCCCCcCc
Confidence 3447999999999999432 896543 344 999 9999 884 799999999999999999
Q ss_pred hhhhcCCCCCCEEEe-ecCccccc--------------------------------------------------------
Q 012745 67 EKVINQLDQLRVLSF-KGNSISGQ-------------------------------------------------------- 89 (457)
Q Consensus 67 ~~~~~~l~~L~~L~L-~~N~l~~~-------------------------------------------------------- 89 (457)
+ .+++|++|+.|+| ++|.++|.
T Consensus 341 ~-~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~ 419 (876)
T 4ecn_A 341 D-AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKK 419 (876)
T ss_dssp G-GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCC
T ss_pred h-HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccc
Confidence 7 8999999999999 77755443
Q ss_pred --------------------CC-CCcCCCCCcEEEccCCcccc-----------------CCCccCC--CCCCCCEEEee
Q 012745 90 --------------------IP-NLLGLVNLKSLYLNDNNFSG-----------------KFPGSLS--SLHRLKIIVLA 129 (457)
Q Consensus 90 --------------------~~-~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~--~l~~L~~L~Ls 129 (457)
+| .|.+|++|+.|+|++|+|++ .+|..++ ++++|+.|+|+
T Consensus 420 ~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls 499 (876)
T 4ecn_A 420 DSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELY 499 (876)
T ss_dssp CCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred ccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECc
Confidence 44 78899999999999999998 3899988 99999999999
Q ss_pred ccccCCCCcccccCCCccceeeccccc-ccC-CCCCC---------CCCCCcEEEeecCcceecCCC---chhhhccCcc
Q 012745 130 NNQISGPIPESLSNLKRLYMLYLQDNK-FTG-PIPPF---------NQTNLRFFNVSNNDLSGQIPV---TPALVRFNAS 195 (457)
Q Consensus 130 ~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~-~~~~~---------~~~~L~~L~l~~N~l~~~~p~---~~~l~~l~~~ 195 (457)
+|++.+.+|..|.++++|+.|+|++|+ |++ .+|.. .+++|+.|+|++|+++ .+|. +..+.+|..+
T Consensus 500 ~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L 578 (876)
T 4ecn_A 500 NCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLL 578 (876)
T ss_dssp SCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEE
T ss_pred CCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEE
Confidence 999999999999999999999999998 887 44431 4458888888888888 4553 4556666667
Q ss_pred ccccCcC
Q 012745 196 SFLLNIN 202 (457)
Q Consensus 196 ~~~~n~~ 202 (457)
.+.+|..
T Consensus 579 ~Ls~N~l 585 (876)
T 4ecn_A 579 DCVHNKV 585 (876)
T ss_dssp ECTTSCC
T ss_pred ECCCCCc
Confidence 7766653
No 5
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.89 E-value=2.8e-23 Score=224.48 Aligned_cols=165 Identities=31% Similarity=0.475 Sum_probs=142.2
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-C-----------------------------------
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-N----------------------------------- 92 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~----------------------------------- 92 (457)
++|++|+|++|.++|.+|. .+..+++|+.|+|++|.+++.+| .
T Consensus 514 ~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (768)
T 3rgz_A 514 ENLAILKLSNNSFSGNIPA-ELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGN 592 (768)
T ss_dssp TTCCEEECCSSCCEEECCG-GGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEE
T ss_pred CCCCEEECCCCcccCcCCH-HHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccccc
Confidence 4677777777777766665 67777788888888877775444 2
Q ss_pred -----------------------------------CcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEeeccccCCCC
Q 012745 93 -----------------------------------LLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPI 137 (457)
Q Consensus 93 -----------------------------------~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 137 (457)
+..+++|+.|+|++|+++|.+|..|+++++|+.|+|++|+++|.+
T Consensus 593 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~i 672 (768)
T 3rgz_A 593 LLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSI 672 (768)
T ss_dssp EEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCC
T ss_pred ccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCC
Confidence 233567889999999999999999999999999999999999999
Q ss_pred cccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCCCchhhhccCccccccCcCcCCCCCCCCCCCC
Q 012745 138 PESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNINLCGEQIQNPCKSI 215 (457)
Q Consensus 138 p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~~c~~~~~~~c~~~ 215 (457)
|..|+.+++|+.|||++|+++|.+|.. .+++|+.|||++|+++|.+|....+..+....+.||+.+||.|.. +|...
T Consensus 673 p~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~ 751 (768)
T 3rgz_A 673 PDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDPS 751 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCSC
T ss_pred ChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCCC
Confidence 999999999999999999999999876 889999999999999999999889999999999999999998876 78654
No 6
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.89 E-value=1.3e-23 Score=222.14 Aligned_cols=170 Identities=22% Similarity=0.369 Sum_probs=136.9
Q ss_pred hhhHHHHHHhHhcCCCC--C-------CCCCCCCCCCCCccc---ccceecCC-CcEeEEEeCCCCCccccChhhhcCCC
Q 012745 8 SGDTEALLSLKSSLDPF--N-------RLSSWKNGDRDVCKW---QGIKECLN-GRVTKLVLEHLNLTGTLDEKVINQLD 74 (457)
Q Consensus 8 ~~~~~~l~~~~~~~~~~--~-------~l~~w~~~~~~~c~~---~gv~~c~~-~~l~~L~L~~n~l~~~l~~~~~~~l~ 74 (457)
..|..||.+|+.+++.. . ...+|... .++|.| .||. |+. ++|+.|+|++|++.|.+|+ .++.|+
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-~~~c~w~~~~GV~-C~~~~~V~~L~L~~~~l~g~lp~-~l~~L~ 105 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-KELDMWGAQPGVS-LNSNGRVTGLSLEGFGASGRVPD-AIGQLT 105 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCS-SCGGGTTCCTTEE-ECTTCCEEEEECTTSCCEEEECG-GGGGCT
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-CCcccccCCCCeE-EcCCCCEEEEEecCcccCCcCCh-HHhcCc
Confidence 36999999999998321 1 23479754 589999 9999 875 6999999999999999987 899999
Q ss_pred CCCEEEeecC----------------------------------------------------------------------
Q 012745 75 QLRVLSFKGN---------------------------------------------------------------------- 84 (457)
Q Consensus 75 ~L~~L~L~~N---------------------------------------------------------------------- 84 (457)
+|+.|+|++|
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 185 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKD 185 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCT
T ss_pred cceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhh
Confidence 9999999988
Q ss_pred --------cccccCCCCcCCCCCcEEEccCCccccC-----------------CCccCC--CCCCCCEEEeeccccCCCC
Q 012745 85 --------SISGQIPNLLGLVNLKSLYLNDNNFSGK-----------------FPGSLS--SLHRLKIIVLANNQISGPI 137 (457)
Q Consensus 85 --------~l~~~~~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~Ls~N~l~~~~ 137 (457)
+|+++++.|.++++|++|+|++|+|++. +|..++ ++++|++|+|++|++.+.+
T Consensus 186 l~l~~~~n~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~ 265 (636)
T 4eco_A 186 TQIGQLSNNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKL 265 (636)
T ss_dssp TTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSC
T ss_pred hhhccccCCCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccC
Confidence 4445333788999999999999999985 899998 9999999999999999999
Q ss_pred cccccCCCccceeeccccc-ccC-CCCCC--CC------CCCcEEEeecCcce
Q 012745 138 PESLSNLKRLYMLYLQDNK-FTG-PIPPF--NQ------TNLRFFNVSNNDLS 180 (457)
Q Consensus 138 p~~~~~l~~L~~L~l~~N~-l~~-~~~~~--~~------~~L~~L~l~~N~l~ 180 (457)
|..|+++++|++|+|++|+ +++ .+|.. .+ ++|+.|++++|+++
T Consensus 266 p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 266 PTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp CTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred hHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 9999999999999999998 776 33322 21 45555555555555
No 7
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=3.6e-22 Score=186.44 Aligned_cols=156 Identities=22% Similarity=0.253 Sum_probs=140.6
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
.+++.|+|++|+++ .+++..|..+++|++|+|++|.|++.++ .|.++++|++|+|++|+|++..+..|..+++|++|+
T Consensus 35 ~~l~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 113 (251)
T 3m19_A 35 ADTEKLDLQSTGLA-TLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLY 113 (251)
T ss_dssp TTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEEccCCCcC-ccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEE
Confidence 46899999999999 6767789999999999999999999888 689999999999999999988888899999999999
Q ss_pred eeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCC-CchhhhccCccccccCcCcC
Q 012745 128 LANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIP-VTPALVRFNASSFLLNINLC 204 (457)
Q Consensus 128 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p-~~~~l~~l~~~~~~~n~~~c 204 (457)
|++|+|++..+..|..+++|++|+|++|+|++.++.. .+++|+.|+|++|+|++.++ .+..+.++..+.+.+|++.|
T Consensus 114 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 114 LGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred cCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 9999999877778899999999999999999887753 78999999999999998877 34567788899999999887
Q ss_pred C
Q 012745 205 G 205 (457)
Q Consensus 205 ~ 205 (457)
.
T Consensus 194 ~ 194 (251)
T 3m19_A 194 S 194 (251)
T ss_dssp T
T ss_pred C
Confidence 4
No 8
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.88 E-value=2.5e-22 Score=183.79 Aligned_cols=148 Identities=21% Similarity=0.314 Sum_probs=128.6
Q ss_pred CCCcccccceecCC-----------CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEE
Q 012745 35 RDVCKWQGIKECLN-----------GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSL 102 (457)
Q Consensus 35 ~~~c~~~gv~~c~~-----------~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L 102 (457)
.|.|.|..|. |.. .+++.|+|++|+|+ .+++..|..+++|+.|+|++|+|++..+ .|.++++|++|
T Consensus 8 ~C~C~~~~v~-c~~~~l~~iP~~l~~~l~~L~l~~n~i~-~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L 85 (220)
T 2v9t_B 8 ACTCSNNIVD-CRGKGLTEIPTNLPETITEIRLEQNTIK-VIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSL 85 (220)
T ss_dssp TSEEETTEEE-CTTSCCSSCCSSCCTTCCEEECCSSCCC-EECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEE
T ss_pred CCEECCCEEE-cCCCCcCcCCCccCcCCCEEECCCCcCC-CcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEE
Confidence 4778888888 753 36899999999999 7777789999999999999999998877 88999999999
Q ss_pred EccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcce
Q 012745 103 YLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLS 180 (457)
Q Consensus 103 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~ 180 (457)
+|++|+|+...+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+.. .+++|+.|+|++|++.
T Consensus 86 ~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 86 VLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 99999999766667889999999999999999888889999999999999999999877754 7889999999999998
Q ss_pred ecCC
Q 012745 181 GQIP 184 (457)
Q Consensus 181 ~~~p 184 (457)
+...
T Consensus 166 c~c~ 169 (220)
T 2v9t_B 166 CDCH 169 (220)
T ss_dssp CSGG
T ss_pred CCCc
Confidence 7654
No 9
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.88 E-value=1.5e-22 Score=185.20 Aligned_cols=150 Identities=22% Similarity=0.297 Sum_probs=126.2
Q ss_pred CCCcccccceecCC-----------CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEE
Q 012745 35 RDVCKWQGIKECLN-----------GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSL 102 (457)
Q Consensus 35 ~~~c~~~gv~~c~~-----------~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L 102 (457)
.|.|.|..+. |.. ..+++|+|++|+|++..++..|..+++|+.|+|++|+|++.++ .|.++++|++|
T Consensus 8 ~C~C~~~~l~-~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L 86 (220)
T 2v70_A 8 KCRCEGTTVD-CSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEI 86 (220)
T ss_dssp TCEEETTEEE-CCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCEECCCEeE-eCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEE
Confidence 4778888777 654 2577899999999843355568889999999999999998888 78899999999
Q ss_pred EccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcce
Q 012745 103 YLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLS 180 (457)
Q Consensus 103 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~ 180 (457)
+|++|+|++..+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|.. .+++|+.|+|++|+++
T Consensus 87 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 87 LLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp ECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred ECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 99999999877778899999999999999999888888999999999999999999876655 7888999999999998
Q ss_pred ecCCC
Q 012745 181 GQIPV 185 (457)
Q Consensus 181 ~~~p~ 185 (457)
+..+.
T Consensus 167 c~c~l 171 (220)
T 2v70_A 167 CNCYL 171 (220)
T ss_dssp CSGGG
T ss_pred CCCch
Confidence 87663
No 10
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=1.2e-21 Score=177.37 Aligned_cols=151 Identities=24% Similarity=0.303 Sum_probs=135.0
Q ss_pred CCCcccccceecCC-----------CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEE
Q 012745 35 RDVCKWQGIKECLN-----------GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSL 102 (457)
Q Consensus 35 ~~~c~~~gv~~c~~-----------~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L 102 (457)
.|.|.|.+|. |.. +++++|+|++|+++ .+++..|..+++|++|+|++|+|++.++ .|.++++|++|
T Consensus 4 ~C~C~~~~v~-c~~~~l~~~p~~~~~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 81 (208)
T 2o6s_A 4 RCSCSGTTVE-CYSQGRTSVPTGIPAQTTYLDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYL 81 (208)
T ss_dssp TCEEETTEEE-CCSSCCSSCCSCCCTTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCEECCCEEE-ecCCCccCCCCCCCCCCcEEEcCCCccC-cCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEE
Confidence 5789999999 764 36899999999999 7887789999999999999999998877 67899999999
Q ss_pred EccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcce
Q 012745 103 YLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLS 180 (457)
Q Consensus 103 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~ 180 (457)
+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++.++.. .+++|+.|++++|.+.
T Consensus 82 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 161 (208)
T 2o6s_A 82 NLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 161 (208)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred ECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee
Confidence 99999999777777899999999999999999877778999999999999999999877754 7899999999999999
Q ss_pred ecCCCch
Q 012745 181 GQIPVTP 187 (457)
Q Consensus 181 ~~~p~~~ 187 (457)
+..|...
T Consensus 162 ~~~~~l~ 168 (208)
T 2o6s_A 162 CTCPGIR 168 (208)
T ss_dssp CCTTTTH
T ss_pred cCCCCHH
Confidence 8877443
No 11
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.87 E-value=4.7e-22 Score=191.92 Aligned_cols=159 Identities=25% Similarity=0.405 Sum_probs=110.6
Q ss_pred cEeEEEeCCCCCccccChhhhcCCC-CCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 50 RVTKLVLEHLNLTGTLDEKVINQLD-QLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 50 ~l~~L~L~~n~l~~~l~~~~~~~l~-~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
+|++|+|++|.+++.+|. .+..++ +|+.|+|++|++++..| .+..++ |+.|+|++|++++..|..|..+++|+.|+
T Consensus 150 ~L~~L~L~~N~l~~~~p~-~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 227 (313)
T 1ogq_A 150 NLVGITFDGNRISGAIPD-SYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIH 227 (313)
T ss_dssp TCCEEECCSSCCEEECCG-GGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEE
T ss_pred CCCeEECcCCcccCcCCH-HHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEE
Confidence 455555555555544443 444444 55555555555554444 444444 56666666666666666677777777777
Q ss_pred eeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCCCchhhhccCccccccCcCcCC
Q 012745 128 LANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNINLCG 205 (457)
Q Consensus 128 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~~c~ 205 (457)
|++|++++.+|. +..+++|++|+|++|+|++.+|.. .+++|+.|+|++|++++.+|....+.++..+.+.+|+.+|+
T Consensus 228 L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 228 LAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp CCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEES
T ss_pred CCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccC
Confidence 777777755544 677788888888888888766654 78899999999999999999888899999999999999999
Q ss_pred CCCCCCC
Q 012745 206 EQIQNPC 212 (457)
Q Consensus 206 ~~~~~~c 212 (457)
.|.. +|
T Consensus 307 ~p~~-~C 312 (313)
T 1ogq_A 307 SPLP-AC 312 (313)
T ss_dssp TTSS-CC
T ss_pred CCCC-CC
Confidence 7664 45
No 12
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.87 E-value=9.9e-22 Score=180.91 Aligned_cols=152 Identities=18% Similarity=0.217 Sum_probs=133.0
Q ss_pred CCCCcccccceecCC-----------CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcE
Q 012745 34 DRDVCKWQGIKECLN-----------GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKS 101 (457)
Q Consensus 34 ~~~~c~~~gv~~c~~-----------~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~ 101 (457)
..+.|+|.+|. |.. ++++.|+|++|+|+ .+++..|..+++|+.|+|++|+|+..++ .|.++++|+.
T Consensus 15 ~~~~Cs~~~v~-c~~~~l~~ip~~~~~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~ 92 (229)
T 3e6j_A 15 SQCSCSGTTVD-CRSKRHASVPAGIPTNAQILYLHDNQIT-KLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTV 92 (229)
T ss_dssp TTCEEETTEEE-CTTSCCSSCCSCCCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CCCEEeCCEeE-ccCCCcCccCCCCCCCCCEEEcCCCccC-ccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCE
Confidence 35899999999 864 46899999999999 5656689999999999999999988877 6789999999
Q ss_pred EEccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcc
Q 012745 102 LYLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDL 179 (457)
Q Consensus 102 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l 179 (457)
|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++.++.. .+++|+.|+|++|++
T Consensus 93 L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 171 (229)
T 3e6j_A 93 LDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPW 171 (229)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCB
T ss_pred EECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCc
Confidence 999999999877778899999999999999999 67888999999999999999999877654 789999999999999
Q ss_pred eecCCCchh
Q 012745 180 SGQIPVTPA 188 (457)
Q Consensus 180 ~~~~p~~~~ 188 (457)
.+..+....
T Consensus 172 ~c~c~~~~~ 180 (229)
T 3e6j_A 172 DCECRDIMY 180 (229)
T ss_dssp CTTBGGGHH
T ss_pred cCCcchhHH
Confidence 987664333
No 13
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.85 E-value=8.6e-21 Score=179.06 Aligned_cols=151 Identities=24% Similarity=0.276 Sum_probs=98.8
Q ss_pred cEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEe
Q 012745 50 RVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVL 128 (457)
Q Consensus 50 ~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 128 (457)
++++|+|++|+++ .+++..|..+++|++|+|++|.|+..++ .|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 38 ~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 38 DTKKLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TCSEEECCSSCCS-CCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCEEECcCCCCC-eeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 4677777777777 5665567777777777777777776655 4566777777777777777655556666777777777
Q ss_pred eccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCCC-chhhhccCccccccCc
Q 012745 129 ANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPV-TPALVRFNASSFLLNI 201 (457)
Q Consensus 129 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~-~~~l~~l~~~~~~~n~ 201 (457)
++|++++..+..|..+++|++|+|++|.|++.++.. .+++|+.|+|++|++++..+. +..+.++..+.+.+|.
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQ 192 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCc
Confidence 777776666666666777777777777766555442 566666666666666665542 2334555555555554
No 14
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.85 E-value=2.1e-21 Score=191.19 Aligned_cols=167 Identities=22% Similarity=0.263 Sum_probs=145.4
Q ss_pred CCCcccccceecCC-----------CcEeEEEeCCCCCccccChhhhc-CCCCCCEEEeecCcccccCC-CCcCCCCCcE
Q 012745 35 RDVCKWQGIKECLN-----------GRVTKLVLEHLNLTGTLDEKVIN-QLDQLRVLSFKGNSISGQIP-NLLGLVNLKS 101 (457)
Q Consensus 35 ~~~c~~~gv~~c~~-----------~~l~~L~L~~n~l~~~l~~~~~~-~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~ 101 (457)
.|.|.+..+. |.. ..++.|+|++|+|+ .+++..|. .+++|+.|+|++|+|+++++ .|.++++|++
T Consensus 15 ~C~C~~~~l~-c~~~~l~~iP~~~~~~l~~L~Ls~N~l~-~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~ 92 (361)
T 2xot_A 15 NCLCASNILS-CSKQQLPNVPQSLPSYTALLDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRY 92 (361)
T ss_dssp TCEEETTEEE-CCSSCCSSCCSSCCTTCSEEECCSSCCC-EECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred CCEECCCEEE-eCCCCcCccCccCCCCCCEEECCCCCCC-ccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCE
Confidence 3668887777 754 35889999999999 78777787 99999999999999999988 7999999999
Q ss_pred EEccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccCCCccceeecccccccCCCCCC-----CCCCCcEEEeec
Q 012745 102 LYLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF-----NQTNLRFFNVSN 176 (457)
Q Consensus 102 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-----~~~~L~~L~l~~ 176 (457)
|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++.++.. .+++|+.|+|++
T Consensus 93 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~ 172 (361)
T 2xot_A 93 LDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSS 172 (361)
T ss_dssp EECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCS
T ss_pred EECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCC
Confidence 999999999888888999999999999999999888999999999999999999999866543 489999999999
Q ss_pred CcceecCCCchhhhcc-----CccccccCcCcCC
Q 012745 177 NDLSGQIPVTPALVRF-----NASSFLLNINLCG 205 (457)
Q Consensus 177 N~l~~~~p~~~~l~~l-----~~~~~~~n~~~c~ 205 (457)
|+|+..++ ..+..+ ..+.+.+|++.|.
T Consensus 173 N~l~~l~~--~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 173 NKLKKLPL--TDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp SCCCCCCH--HHHHHSCHHHHTTEECCSSCEECC
T ss_pred CCCCccCH--HHhhhccHhhcceEEecCCCccCC
Confidence 99997665 444444 4578899999985
No 15
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.85 E-value=1.6e-20 Score=177.23 Aligned_cols=160 Identities=21% Similarity=0.289 Sum_probs=76.0
Q ss_pred CCcccccceecCC-CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCC
Q 012745 36 DVCKWQGIKECLN-GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKF 113 (457)
Q Consensus 36 ~~c~~~gv~~c~~-~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~ 113 (457)
+.|.|.|+. |.. .+++.+++++++++ .+|. .+ .++|+.|+|++|+|++.++ .|.++++|++|+|++|+|+...
T Consensus 3 ~~C~~~~~~-C~c~~~~~~l~~~~~~l~-~ip~-~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 3 ALCKKDGGV-CSCNNNKNSVDCSSKKLT-AIPS-NI--PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCBGGGTCS-BEEETTTTEEECTTSCCS-SCCS-CC--CTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred ccCCCCCCC-CEeCCCCCEEEccCCCCC-ccCC-CC--CCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 345555544 332 23445555555555 4443 11 1345555555555554444 4455555555555555555433
Q ss_pred CccCCCCCCCCEEEeeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCCC-chhhh
Q 012745 114 PGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPV-TPALV 190 (457)
Q Consensus 114 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~-~~~l~ 190 (457)
+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+.. .+++|+.|+|++|.|++.++. +..+.
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 157 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCc
Confidence 334445555555555555555444444455555555555555555444332 445555555555555544332 22334
Q ss_pred ccCccccccC
Q 012745 191 RFNASSFLLN 200 (457)
Q Consensus 191 ~l~~~~~~~n 200 (457)
++..+.+.+|
T Consensus 158 ~L~~L~L~~n 167 (270)
T 2o6q_A 158 SLKELRLYNN 167 (270)
T ss_dssp TCCEEECCSS
T ss_pred ccceeEecCC
Confidence 4444444444
No 16
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.83 E-value=2.1e-20 Score=178.25 Aligned_cols=152 Identities=23% Similarity=0.167 Sum_probs=78.9
Q ss_pred cEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEee
Q 012745 50 RVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLA 129 (457)
Q Consensus 50 ~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 129 (457)
+|++|+|++|.|+ .+++ ...+++|+.|+|++|+|+..+..+.++++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 56 ~L~~L~L~~n~l~-~~~~--~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~ 132 (290)
T 1p9a_G 56 RLTQLNLDRAELT-KLQV--DGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132 (290)
T ss_dssp TCCEEECTTSCCC-EEEC--CSCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECT
T ss_pred CCCEEECCCCccC-cccC--CCCCCcCCEEECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECC
Confidence 4444444444444 3322 134445555555555554333344555555555555555554444555555555555555
Q ss_pred ccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCCCchhhhccCccccccCcCcC
Q 012745 130 NNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNINLC 204 (457)
Q Consensus 130 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~~c 204 (457)
+|+|++..+..|..+++|+.|+|++|+|++.++.. .+++|+.|+|++|+|+..++.......+..+.+.+||+.|
T Consensus 133 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccC
Confidence 55555544445555555555555555555444432 4555555555555555444433344445555555666555
No 17
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=2.1e-20 Score=170.86 Aligned_cols=150 Identities=19% Similarity=0.229 Sum_probs=135.3
Q ss_pred eEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEeec
Q 012745 52 TKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLAN 130 (457)
Q Consensus 52 ~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 130 (457)
+.+++++++++ .+|. .+ .++|+.|+|++|+|+++++ .|.++++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 14 ~~v~c~~~~l~-~iP~-~l--~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPT-NL--PETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TEEECTTSCCS-SCCS-SC--CTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CEEEcCCCCcC-cCCC-cc--CcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 57899999999 8987 33 2789999999999999888 899999999999999999998899999999999999999
Q ss_pred cccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCCC-chhhhccCccccccCcCcCC
Q 012745 131 NQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPV-TPALVRFNASSFLLNINLCG 205 (457)
Q Consensus 131 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~-~~~l~~l~~~~~~~n~~~c~ 205 (457)
|+|+...+..|..+++|++|+|++|+|++..+.. .+++|+.|+|++|+|++..+. +..+.++..+.+.+|++.|.
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 9999777777899999999999999999887765 789999999999999998873 45677888899999999884
No 18
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.83 E-value=4.2e-20 Score=174.53 Aligned_cols=154 Identities=23% Similarity=0.210 Sum_probs=138.1
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
++|++|+|++|.++ .++ .+..+++|++|+|++|.|++.++ .|.++++|++|+|++|++++..+..|..+++|++|+
T Consensus 63 ~~L~~L~l~~n~l~-~~~--~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 63 PNVRYLALGGNKLH-DIS--ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp TTCCEEECTTSCCC-CCG--GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCC-Cch--hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 58999999999999 553 78999999999999999998888 688999999999999999988888899999999999
Q ss_pred eeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCCC-chhhhccCccccccCcCcC
Q 012745 128 LANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPV-TPALVRFNASSFLLNINLC 204 (457)
Q Consensus 128 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~-~~~l~~l~~~~~~~n~~~c 204 (457)
|++|++++..+..|..+++|++|+|++|+|++.++.. .+++|+.|++++|++++.+|. +..+.++..+.+.+|++.|
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 9999999888888899999999999999999877754 789999999999999998874 3567788889999999876
Q ss_pred C
Q 012745 205 G 205 (457)
Q Consensus 205 ~ 205 (457)
.
T Consensus 220 ~ 220 (272)
T 3rfs_A 220 T 220 (272)
T ss_dssp C
T ss_pred c
Confidence 4
No 19
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.82 E-value=1.8e-20 Score=167.57 Aligned_cols=152 Identities=18% Similarity=0.207 Sum_probs=128.0
Q ss_pred eEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCC--CcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEee
Q 012745 52 TKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPN--LLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLA 129 (457)
Q Consensus 52 ~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~--~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 129 (457)
+.|++++|+++ .+|.. + ..+|+.|+|++|+|++.++. |..+++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~~-~--~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRD-I--PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCSC-C--CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC-cCccC-C--CCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 45788899998 89873 3 23899999999999988873 8899999999999999999999999999999999999
Q ss_pred ccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCCCchhhhccCccccccCcCcCCCC
Q 012745 130 NNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNINLCGEQ 207 (457)
Q Consensus 130 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~~c~~~ 207 (457)
+|+|++..|..|..+++|++|+|++|+|++.+|.. .+++|+.|+|++|++++..+.......+....+.++...|+.|
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 99999888888999999999999999999887765 7899999999999999887744333333334455565667654
No 20
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=7.4e-20 Score=167.25 Aligned_cols=150 Identities=17% Similarity=0.236 Sum_probs=133.8
Q ss_pred eEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC--CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEee
Q 012745 52 TKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP--NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLA 129 (457)
Q Consensus 52 ~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 129 (457)
+.+++++|.++ .+|. .+ ...++.|+|++|+|++.++ .|.++++|+.|+|++|+|++..+..|..+++|++|+|+
T Consensus 14 ~~l~~s~n~l~-~iP~-~~--~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPE-HI--PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TEEECCSSCCS-SCCS-CC--CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEeEeCCCCcc-cCcc-CC--CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 48999999999 8886 33 3467999999999999865 48899999999999999998888899999999999999
Q ss_pred ccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCC-CchhhhccCccccccCcCcCC
Q 012745 130 NNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIP-VTPALVRFNASSFLLNINLCG 205 (457)
Q Consensus 130 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p-~~~~l~~l~~~~~~~n~~~c~ 205 (457)
+|+|++..+..|..+++|++|+|++|+|++..|.. .+++|+.|+|++|+|++..| .+..+.++..+.+.+|++.|.
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 99999888888999999999999999999887765 78999999999999999866 445577788899999998884
No 21
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=9.5e-20 Score=167.59 Aligned_cols=154 Identities=23% Similarity=0.267 Sum_probs=134.6
Q ss_pred ecCCCcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCC
Q 012745 45 ECLNGRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRL 123 (457)
Q Consensus 45 ~c~~~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 123 (457)
.|.. +.+++++++++ .+|.. + .++|+.|+|++|.|++..+ .|.++++|+.|+|++|+|+...+..|..+++|
T Consensus 18 ~Cs~---~~v~c~~~~l~-~ip~~-~--~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L 90 (229)
T 3e6j_A 18 SCSG---TTVDCRSKRHA-SVPAG-I--PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQL 90 (229)
T ss_dssp EEET---TEEECTTSCCS-SCCSC-C--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred EEeC---CEeEccCCCcC-ccCCC-C--CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCc
Confidence 4653 56999999999 89873 2 3899999999999999877 78999999999999999997777788999999
Q ss_pred CEEEeeccccCCCCcccccCCCccceeecccccccCCCCCC-CCCCCcEEEeecCcceecCCC-chhhhccCccccccCc
Q 012745 124 KIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF-NQTNLRFFNVSNNDLSGQIPV-TPALVRFNASSFLLNI 201 (457)
Q Consensus 124 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~~~~p~-~~~l~~l~~~~~~~n~ 201 (457)
+.|+|++|+|++..+..|..+++|++|+|++|+|+..+... .+++|+.|+|++|+|++.++. +..+.++..+.+.+|+
T Consensus 91 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 170 (229)
T 3e6j_A 91 TVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNP 170 (229)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred CEEECCCCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCC
Confidence 99999999999887888999999999999999999654444 889999999999999987763 4567788889999999
Q ss_pred CcCC
Q 012745 202 NLCG 205 (457)
Q Consensus 202 ~~c~ 205 (457)
+.|.
T Consensus 171 ~~c~ 174 (229)
T 3e6j_A 171 WDCE 174 (229)
T ss_dssp BCTT
T ss_pred ccCC
Confidence 8874
No 22
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.82 E-value=6.5e-20 Score=171.11 Aligned_cols=160 Identities=20% Similarity=0.223 Sum_probs=141.3
Q ss_pred CcccccceecCCCcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCc
Q 012745 37 VCKWQGIKECLNGRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPG 115 (457)
Q Consensus 37 ~c~~~gv~~c~~~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~ 115 (457)
+|.|.|.. |.. ..++++++++.++ .+|. .+. ++|+.|+|++|.|++..+ .|.++++|++|+|++|+|++..+.
T Consensus 4 Cp~~~gC~-C~~-~~~~l~~~~~~l~-~~p~-~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 77 (251)
T 3m19_A 4 CETVTGCT-CNE-GKKEVDCQGKSLD-SVPS-GIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAG 77 (251)
T ss_dssp CHHHHSSE-EEG-GGTEEECTTCCCS-SCCS-CCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTT
T ss_pred CCCCCceE-cCC-CCeEEecCCCCcc-ccCC-CCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHh
Confidence 55788877 753 5678999999999 8987 332 689999999999999888 799999999999999999998888
Q ss_pred cCCCCCCCCEEEeeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCC-Cchhhhcc
Q 012745 116 SLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIP-VTPALVRF 192 (457)
Q Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p-~~~~l~~l 192 (457)
.|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++.++.. .+++|+.|+|++|+|++.++ .+..+.++
T Consensus 78 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 157 (251)
T 3m19_A 78 VFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNL 157 (251)
T ss_dssp TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred HhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCC
Confidence 8999999999999999999888888999999999999999999877764 78999999999999998887 35667788
Q ss_pred CccccccCcC
Q 012745 193 NASSFLLNIN 202 (457)
Q Consensus 193 ~~~~~~~n~~ 202 (457)
..+.+.+|..
T Consensus 158 ~~L~L~~N~l 167 (251)
T 3m19_A 158 QTLSLSTNQL 167 (251)
T ss_dssp CEEECCSSCC
T ss_pred CEEECCCCcC
Confidence 8888888864
No 23
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.81 E-value=4.9e-20 Score=175.18 Aligned_cols=152 Identities=21% Similarity=0.269 Sum_probs=114.3
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCc-ccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNS-ISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKII 126 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~-l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 126 (457)
++|++|+|++|.++ .+++..|..+++|++|+|++|. ++...+ .|.++++|++|+|++|++++..|..|..+++|++|
T Consensus 56 ~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 134 (285)
T 1ozn_A 56 RNLTILWLHSNVLA-RIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYL 134 (285)
T ss_dssp TTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCEEECCCCccc-eeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEE
Confidence 57888888888888 5555578888888888888886 776655 77788888888888888887777778888888888
Q ss_pred EeeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCC-CchhhhccCccccccCc
Q 012745 127 VLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIP-VTPALVRFNASSFLLNI 201 (457)
Q Consensus 127 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p-~~~~l~~l~~~~~~~n~ 201 (457)
+|++|++++..+..|..+++|++|+|++|+|++.++.. .+++|+.|++++|.+++..| .+..+.++..+.+.+|.
T Consensus 135 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 212 (285)
T 1ozn_A 135 YLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN 212 (285)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCc
Confidence 88888888666666788888888888888887666543 67778888888888877755 23345566666666664
No 24
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.81 E-value=1.9e-19 Score=171.06 Aligned_cols=153 Identities=20% Similarity=0.226 Sum_probs=138.2
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCc-cccCCCccCCCCCCCCEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNN-FSGKFPGSLSSLHRLKII 126 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L 126 (457)
+++++|+|++|+++ .+++..|..+++|+.|+|++|.|++..+ .|.++++|++|+|++|. ++...|..|..+++|++|
T Consensus 32 ~~l~~L~l~~n~i~-~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 32 AASQRIFLHGNRIS-HVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp TTCSEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCceEEEeeCCcCC-ccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 57999999999999 7877789999999999999999999877 89999999999999997 887778899999999999
Q ss_pred EeeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCCC-chhhhccCccccccCcC
Q 012745 127 VLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPV-TPALVRFNASSFLLNIN 202 (457)
Q Consensus 127 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~-~~~l~~l~~~~~~~n~~ 202 (457)
+|++|.+++..|..|..+++|++|+|++|++++.++.. .+++|+.|+|++|++++.++. +..+.++..+.+.+|..
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 189 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRV 189 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcc
Confidence 99999999888999999999999999999999877754 789999999999999988773 55677788888888763
No 25
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.81 E-value=2e-20 Score=167.30 Aligned_cols=168 Identities=23% Similarity=0.282 Sum_probs=134.4
Q ss_pred CCCcccccceecCC-----------CcEeEEEeCCCCCccccCh-hhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcE
Q 012745 35 RDVCKWQGIKECLN-----------GRVTKLVLEHLNLTGTLDE-KVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKS 101 (457)
Q Consensus 35 ~~~c~~~gv~~c~~-----------~~l~~L~L~~n~l~~~l~~-~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~ 101 (457)
.|.|.|..+. |.. .++++|+|++|+|+ .+++ ..|..+++|+.|+|++|+|++..+ .|.++++|++
T Consensus 5 ~C~C~~~~l~-~s~~~l~~ip~~~~~~l~~L~l~~n~i~-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 82 (192)
T 1w8a_A 5 MCHCEGTTVD-CTGRGLKEIPRDIPLHTTELLLNDNELG-RISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQE 82 (192)
T ss_dssp TSEEETTEEE-CTTSCCSSCCSCCCTTCSEEECCSCCCC-SBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCE
T ss_pred CCEECCCEEE-cCCCCcCcCccCCCCCCCEEECCCCcCC-ccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCE
Confidence 4778888887 653 37899999999999 6665 359999999999999999999987 8999999999
Q ss_pred EEccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccCCCccceeecccccccCCCCCCCC-CCCcEEEeecCcce
Q 012745 102 LYLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPFNQ-TNLRFFNVSNNDLS 180 (457)
Q Consensus 102 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~~L~~L~l~~N~l~ 180 (457)
|+|++|+|++..+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|++++..+...+ ..++...+..+...
T Consensus 83 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~ 162 (192)
T 1w8a_A 83 LQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAAR 162 (192)
T ss_dssp EECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCB
T ss_pred EECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCC
Confidence 99999999999888899999999999999999999999999999999999999999865442211 11222234455555
Q ss_pred ecCCCchhhhccCccccccCcCcCCC
Q 012745 181 GQIPVTPALVRFNASSFLLNINLCGE 206 (457)
Q Consensus 181 ~~~p~~~~l~~l~~~~~~~n~~~c~~ 206 (457)
+..| ..+.......+..+...|..
T Consensus 163 C~~P--~~l~~~~l~~l~~~~~~C~~ 186 (192)
T 1w8a_A 163 CGAP--SKVRDVQIKDLPHSEFKCSS 186 (192)
T ss_dssp BCSS--TTTTTSBGGGSCTTTCCCCC
T ss_pred CCCC--hHHcCCChhhCcHhhcCcCC
Confidence 5556 45555555566666666654
No 26
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.80 E-value=9.9e-20 Score=191.84 Aligned_cols=135 Identities=22% Similarity=0.243 Sum_probs=124.8
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
.++++|||++|+|+ .+|+..|.++++|++|+|++|+|+++++ .|.+|++|++|+|++|+|++..+..|.++++|++|+
T Consensus 52 ~~~~~LdLs~N~i~-~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 52 FSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp TTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred cCCCEEEeeCCCCC-CCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 47899999999999 8988899999999999999999999988 799999999999999999987778899999999999
Q ss_pred eeccccCCCCcccccCCCccceeecccccccCCC-CCC--CCCCCcEEEeecCcceecCC
Q 012745 128 LANNQISGPIPESLSNLKRLYMLYLQDNKFTGPI-PPF--NQTNLRFFNVSNNDLSGQIP 184 (457)
Q Consensus 128 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~--~~~~L~~L~l~~N~l~~~~p 184 (457)
|++|+|++..+..|+++++|++|+|++|.|++.. |.. .+++|+.|++++|+|++..|
T Consensus 131 Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 190 (635)
T 4g8a_A 131 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 190 (635)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred CCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccc
Confidence 9999999887888999999999999999998643 433 78999999999999999877
No 27
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.80 E-value=5.7e-19 Score=166.74 Aligned_cols=140 Identities=22% Similarity=0.234 Sum_probs=128.1
Q ss_pred CCcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEE
Q 012745 48 NGRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKII 126 (457)
Q Consensus 48 ~~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 126 (457)
.++|++|+|++|.++ .+++..|..+++|++|+|++|++++.++ .|.++++|++|+|++|+|++..+..|..+++|+.|
T Consensus 84 l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 162 (272)
T 3rfs_A 84 LTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTEL 162 (272)
T ss_dssp CTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccC-ccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEE
Confidence 368999999999999 7777789999999999999999998888 68899999999999999998888888999999999
Q ss_pred EeeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCCCchh
Q 012745 127 VLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPVTPA 188 (457)
Q Consensus 127 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~ 188 (457)
+|++|++++..+..|..+++|++|+|++|+|++.++.. .+++|+.|++++|++.+.+|....
T Consensus 163 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l~~ 226 (272)
T 3rfs_A 163 DLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRY 226 (272)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHH
T ss_pred ECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCcHHHH
Confidence 99999999888888899999999999999999888764 789999999999999998885443
No 28
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.79 E-value=8.1e-19 Score=167.27 Aligned_cols=152 Identities=20% Similarity=0.189 Sum_probs=135.0
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEe
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVL 128 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 128 (457)
++++.|+|++|.++ .+++..|..+++|+.|+|++|.|++.++. ..+++|++|+|++|+|+ .+|..+..+++|++|+|
T Consensus 31 ~~l~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLY-TFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCS-EEEGGGGTTCTTCCEEECTTSCCCEEECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCcCC-ccCHHHhhcCCCCCEEECCCCccCcccCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 57999999999999 66667899999999999999999976654 78999999999999999 78889999999999999
Q ss_pred eccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCCCc-hhhhccCccccccCcCc
Q 012745 129 ANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPVT-PALVRFNASSFLLNINL 203 (457)
Q Consensus 129 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~-~~l~~l~~~~~~~n~~~ 203 (457)
++|+|++..|..|..+++|++|+|++|+|++.++.. .+++|+.|+|++|+|+..++.. ..+.++..+.+.+|...
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC
Confidence 999999888889999999999999999999877765 7899999999999999877633 45678888888888643
No 29
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.79 E-value=4.8e-19 Score=167.48 Aligned_cols=110 Identities=27% Similarity=0.350 Sum_probs=56.0
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
++|++|+|++|+++ .+++..|..+++|+.|+|++|.|++.++ .|.++++|++|++++|++++..+..|..+++|++|+
T Consensus 52 ~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 130 (276)
T 2z62_A 52 PELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (276)
T ss_dssp TTCSEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred cCCcEEECCCCcCC-ccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEE
Confidence 34555555555555 4444445555555555555555554444 445555555555555555544444455555555555
Q ss_pred eeccccCCC-CcccccCCCccceeecccccccC
Q 012745 128 LANNQISGP-IPESLSNLKRLYMLYLQDNKFTG 159 (457)
Q Consensus 128 Ls~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~ 159 (457)
|++|.+++. +|..|..+++|++|+|++|+|++
T Consensus 131 l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~ 163 (276)
T 2z62_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163 (276)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCE
T ss_pred CcCCccceecCchhhccCCCCCEEECCCCCCCc
Confidence 555555432 34555555555555555555543
No 30
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.79 E-value=6.4e-19 Score=166.61 Aligned_cols=152 Identities=22% Similarity=0.235 Sum_probs=132.0
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
.++++|+|++|+++ .+++..|..+++|++|+|++|.|++.++ .|.++++|++|+|++|++++..+..|.++++|++|+
T Consensus 28 ~~l~~L~ls~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 28 FSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp TTCCEEECTTCCCC-EECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CCccEEECCCCccc-ccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 46999999999999 7777789999999999999999998888 899999999999999999988889999999999999
Q ss_pred eeccccCCCCcccccCCCccceeecccccccCC-CCCC--CCCCCcEEEeecCcceecCC-CchhhhccC----cccccc
Q 012745 128 LANNQISGPIPESLSNLKRLYMLYLQDNKFTGP-IPPF--NQTNLRFFNVSNNDLSGQIP-VTPALVRFN----ASSFLL 199 (457)
Q Consensus 128 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~~~~--~~~~L~~L~l~~N~l~~~~p-~~~~l~~l~----~~~~~~ 199 (457)
+++|++++..+..+..+++|++|+|++|.+++. +|.. .+++|+.|++++|++++..+ .+..+..+. .+.+.+
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~ 186 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCS
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCC
Confidence 999999987777899999999999999999874 3443 78999999999999998875 233444454 455555
Q ss_pred Cc
Q 012745 200 NI 201 (457)
Q Consensus 200 n~ 201 (457)
|.
T Consensus 187 n~ 188 (276)
T 2z62_A 187 NP 188 (276)
T ss_dssp SC
T ss_pred Cc
Confidence 54
No 31
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.78 E-value=2.7e-19 Score=175.47 Aligned_cols=171 Identities=19% Similarity=0.181 Sum_probs=136.9
Q ss_pred CCCCCCCCCcccccceecCC-----------CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCC
Q 012745 29 SWKNGDRDVCKWQGIKECLN-----------GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGL 96 (457)
Q Consensus 29 ~w~~~~~~~c~~~gv~~c~~-----------~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l 96 (457)
.|... .+.|.|.++..|.. ++|++|+|++|+++ .+++..|..+++|+.|+|++|+|++..+ .|.++
T Consensus 22 ~~~~~-~~~C~~~~~c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 99 (353)
T 2z80_A 22 SSNQA-SLSCDRNGICKGSSGSLNSIPSGLTEAVKSLDLSNNRIT-YISNSDLQRCVNLQALVLTSNGINTIEEDSFSSL 99 (353)
T ss_dssp ------CCEECTTSEEECCSTTCSSCCTTCCTTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred CCCcc-CCCCCCCeEeeCCCCCcccccccccccCcEEECCCCcCc-ccCHHHhccCCCCCEEECCCCccCccCHhhcCCC
Confidence 45433 47888888754432 47999999999999 7877789999999999999999999887 79999
Q ss_pred CCCcEEEccCCccccCCCccCCCCCCCCEEEeeccccCCCCc-ccccCCCccceeeccccc-ccCCCCCC--CCCCCcEE
Q 012745 97 VNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIP-ESLSNLKRLYMLYLQDNK-FTGPIPPF--NQTNLRFF 172 (457)
Q Consensus 97 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~-l~~~~~~~--~~~~L~~L 172 (457)
++|++|+|++|+|++..+..|..+++|++|+|++|++++..+ ..|..+++|++|++++|. ++...+.. .+++|+.|
T Consensus 100 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L 179 (353)
T 2z80_A 100 GSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEEL 179 (353)
T ss_dssp TTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEE
T ss_pred CCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEE
Confidence 999999999999996555569999999999999999995444 478999999999999994 66655543 78899999
Q ss_pred EeecCcceecCC-CchhhhccCccccccCc
Q 012745 173 NVSNNDLSGQIP-VTPALVRFNASSFLLNI 201 (457)
Q Consensus 173 ~l~~N~l~~~~p-~~~~l~~l~~~~~~~n~ 201 (457)
++++|.+++..| .+..+.++..+.+.+|.
T Consensus 180 ~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 209 (353)
T 2z80_A 180 EIDASDLQSYEPKSLKSIQNVSHLILHMKQ 209 (353)
T ss_dssp EEEETTCCEECTTTTTTCSEEEEEEEECSC
T ss_pred ECCCCCcCccCHHHHhccccCCeecCCCCc
Confidence 999999998866 33445556666666665
No 32
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.78 E-value=2.3e-18 Score=155.75 Aligned_cols=151 Identities=20% Similarity=0.150 Sum_probs=133.0
Q ss_pred EeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEee
Q 012745 51 VTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLA 129 (457)
Q Consensus 51 l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 129 (457)
-+.++++++.++ .+|.. ..++|++|+|++|.|++.++ .|.++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 9 ~~~v~c~~~~l~-~~p~~---~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 84 (208)
T 2o6s_A 9 GTTVECYSQGRT-SVPTG---IPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLS 84 (208)
T ss_dssp TTEEECCSSCCS-SCCSC---CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEEecCCCcc-CCCCC---CCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECC
Confidence 367899999999 88763 35689999999999998887 67899999999999999997777778999999999999
Q ss_pred ccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCCC-chhhhccCccccccCcCcCC
Q 012745 130 NNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPV-TPALVRFNASSFLLNINLCG 205 (457)
Q Consensus 130 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~-~~~l~~l~~~~~~~n~~~c~ 205 (457)
+|+|++..+..|..+++|++|+|++|+|++.++.. .+++|+.|++++|++++.++. +..+.++..+.+.+|+..|.
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 163 (208)
T 2o6s_A 85 TNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 163 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC
T ss_pred CCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC
Confidence 99999877777899999999999999999877764 789999999999999987774 45677888999999998764
No 33
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.78 E-value=2.1e-19 Score=172.60 Aligned_cols=164 Identities=20% Similarity=0.243 Sum_probs=125.9
Q ss_pred CCCcccccceecCC-----------CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccC--C-CCcCCCCCc
Q 012745 35 RDVCKWQGIKECLN-----------GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQI--P-NLLGLVNLK 100 (457)
Q Consensus 35 ~~~c~~~gv~~c~~-----------~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~--~-~~~~l~~L~ 100 (457)
.|.|.|.+|. |.. +++++|+|++|+++ .+|+..|..+++|+.|+|++|.|+... + .+.++++|+
T Consensus 4 ~C~C~~~~l~-c~~~~l~~ip~~~~~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~ 81 (306)
T 2z66_A 4 RCSCSGTEIR-CNSKGLTSVPTGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLK 81 (306)
T ss_dssp TCEEETTEEE-CCSSCCSSCCSCCCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCC
T ss_pred CCeeCCCEEE-cCCCCcccCCCCCCCCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccC
Confidence 4788999988 764 47999999999999 898877899999999999999998552 3 566788888
Q ss_pred EEEccCCccccCCCccCCCCCCCCEEEeeccccCCCCc-ccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecC
Q 012745 101 SLYLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIP-ESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNN 177 (457)
Q Consensus 101 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N 177 (457)
+|+|++|.++ .+|..|..+++|++|+|++|++++..+ ..+..+++|++|++++|.+++..+.. .+++|+.|++++|
T Consensus 82 ~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 160 (306)
T 2z66_A 82 YLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGN 160 (306)
T ss_dssp EEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTC
T ss_pred EEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCC
Confidence 8888888887 456667788888888888888875544 56777888888888888887666654 6777888888888
Q ss_pred ccee--cCCCchhhhccCccccccCc
Q 012745 178 DLSG--QIPVTPALVRFNASSFLLNI 201 (457)
Q Consensus 178 ~l~~--~~p~~~~l~~l~~~~~~~n~ 201 (457)
.+++ .+..+..+.++..+.+.+|.
T Consensus 161 ~l~~~~~~~~~~~l~~L~~L~Ls~n~ 186 (306)
T 2z66_A 161 SFQENFLPDIFTELRNLTFLDLSQCQ 186 (306)
T ss_dssp EEGGGEECSCCTTCTTCCEEECTTSC
T ss_pred ccccccchhHHhhCcCCCEEECCCCC
Confidence 8775 33344556666777776664
No 34
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.78 E-value=4.5e-19 Score=169.21 Aligned_cols=113 Identities=20% Similarity=0.329 Sum_probs=90.0
Q ss_pred HhcccccCCccEEEEEEec------CCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEe
Q 012745 339 SAETLGRGTIGSTYKAVLE------SGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDY 412 (457)
Q Consensus 339 ~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 412 (457)
..+.||+|+||.||+|.+. ++..||||+++.......++|.+|+++|++++|||||+++|+|.+.+..++||||
T Consensus 17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 96 (299)
T 4asz_A 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEY 96 (299)
T ss_dssp EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEc
Confidence 4578999999999999852 4789999999876655677899999999999999999999999999999999999
Q ss_pred cCCCchHHHhhhCCC--------CCCchhhHHHH--HHHHHHHHHHhcC
Q 012745 413 FPNGSLFSLIHGTCC--------LATRPLFIFLF--SFFRLIKKVFQMS 451 (457)
Q Consensus 413 ~~~GsL~~~l~~~~~--------~~~~~l~~~~r--~~~~i~~~v~~~~ 451 (457)
|++|||.++|+..+. .....++|..+ .+.||+.|++++|
T Consensus 97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH 145 (299)
T 4asz_A 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA 145 (299)
T ss_dssp CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999987531 12234666553 5667777777754
No 35
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.78 E-value=4.7e-19 Score=158.49 Aligned_cols=129 Identities=21% Similarity=0.234 Sum_probs=115.7
Q ss_pred eEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEeecc
Q 012745 52 TKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLANN 131 (457)
Q Consensus 52 ~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 131 (457)
+.+++++|+++ .+|.. + .++|+.|+|++|.|+.++..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~-~--~~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKG-I--PRDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSC-C--CTTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCC-C--CCCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 35788899999 88863 2 36899999999999966668999999999999999999888889999999999999999
Q ss_pred ccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCC
Q 012745 132 QISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIP 184 (457)
Q Consensus 132 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p 184 (457)
+|++..|..|..+++|++|+|++|+|+..++.. .+++|+.|+|++|++.+...
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 999888889999999999999999999877754 78999999999999998655
No 36
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.78 E-value=5.2e-19 Score=175.81 Aligned_cols=150 Identities=15% Similarity=0.190 Sum_probs=134.4
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
.+++.|++++|.+. .+|+..|..+++|++|+|++|.|++.++ .|.++++|++|+|++|++++..|..|..+++|++|+
T Consensus 45 ~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 45 NNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp CCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 67899999999999 8998889999999999999999999888 899999999999999999988888899999999999
Q ss_pred eeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCCCchhhhccCccccccCc
Q 012745 128 LANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNI 201 (457)
Q Consensus 128 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~ 201 (457)
|++|+++...+..|..+++|++|+|++|.+++..+.. .+++|+.|++++|++++... ..+.++..+.+.+|.
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~l~~L~~L~l~~n~ 197 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDL--SLIPSLFHANVSYNL 197 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCG--GGCTTCSEEECCSSC
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcccc--ccccccceeeccccc
Confidence 9999999665566799999999999999999877764 78999999999999998643 667777777777664
No 37
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.78 E-value=6.6e-19 Score=170.36 Aligned_cols=113 Identities=22% Similarity=0.339 Sum_probs=92.6
Q ss_pred HhcccccCCccEEEEEEec------CCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEe
Q 012745 339 SAETLGRGTIGSTYKAVLE------SGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDY 412 (457)
Q Consensus 339 ~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 412 (457)
..+.||+|+||.||+|.+. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..||||||
T Consensus 45 l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 124 (329)
T 4aoj_A 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEY 124 (329)
T ss_dssp EEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 4578999999999999853 4789999999876656678899999999999999999999999999999999999
Q ss_pred cCCCchHHHhhhCCCC----------CCchhhHHHH--HHHHHHHHHHhcC
Q 012745 413 FPNGSLFSLIHGTCCL----------ATRPLFIFLF--SFFRLIKKVFQMS 451 (457)
Q Consensus 413 ~~~GsL~~~l~~~~~~----------~~~~l~~~~r--~~~~i~~~v~~~~ 451 (457)
|++|+|.++|+..... ....++|..+ .+.||+.||+++|
T Consensus 125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH 175 (329)
T 4aoj_A 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA 175 (329)
T ss_dssp CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 9999999999875421 1134666553 5667888877754
No 38
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.78 E-value=4.7e-19 Score=170.08 Aligned_cols=153 Identities=21% Similarity=0.289 Sum_probs=118.8
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC--CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP--NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKII 126 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 126 (457)
++|++|+|++|.+. .+|+ .+..+++|+.|+|++|++++.++ .+..+++|++|+|++|.+++..+..|..+++|++|
T Consensus 78 ~~L~~L~Ls~n~i~-~l~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 78 TSLKYLDLSFNGVI-TMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp SCCCEEECCSCSEE-EEEE-EEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred cccCEEECCCCccc-cChh-hcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 57888888888888 6765 57888888888888888887765 67788888888888888887777788888888888
Q ss_pred EeeccccCC-CCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCC-CchhhhccCccccccCcC
Q 012745 127 VLANNQISG-PIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIP-VTPALVRFNASSFLLNIN 202 (457)
Q Consensus 127 ~Ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p-~~~~l~~l~~~~~~~n~~ 202 (457)
+|++|.+++ ..|..|..+++|++|+|++|+|++..+.. .+++|+.|+|++|++++..+ .+..+.++..+.+.+|..
T Consensus 156 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 235 (306)
T 2z66_A 156 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 235 (306)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCC
T ss_pred ECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCC
Confidence 888888875 46777888888888888888888765554 67788888888888887665 234456667777777754
Q ss_pred c
Q 012745 203 L 203 (457)
Q Consensus 203 ~ 203 (457)
.
T Consensus 236 ~ 236 (306)
T 2z66_A 236 M 236 (306)
T ss_dssp C
T ss_pred c
Confidence 3
No 39
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.78 E-value=5.2e-19 Score=158.67 Aligned_cols=149 Identities=17% Similarity=0.222 Sum_probs=129.1
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEe
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVL 128 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 128 (457)
++|+.|++++|+++ .+| .+..+++|+.|+|++|.++. ++.+..+++|++|+|++|++++..|..|..+++|++|+|
T Consensus 44 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~l~~n~~~~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT--GIEYAHNIKDLTINNIHATN-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCS-CCT--TGGGCTTCSEEEEESCCCSC-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCcc-ChH--HHhcCCCCCEEEccCCCCCc-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 47999999999999 886 58899999999999998874 347889999999999999999878889999999999999
Q ss_pred eccccCCCCcccccCCCccceeeccccc-ccCCCCCCCCCCCcEEEeecCcceecCCCchhhhccCccccccCcC
Q 012745 129 ANNQISGPIPESLSNLKRLYMLYLQDNK-FTGPIPPFNQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNIN 202 (457)
Q Consensus 129 s~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~ 202 (457)
++|++++..|..+..+++|++|+|++|+ ++...+-..+++|+.|++++|++++.. ....++++..+.+.+|+.
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n~i~~~~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDGVHDYR-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTBCCCCCT-TGGGCSSCCEEEECBC--
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCCCCcChH-HhccCCCCCEEEeeCccc
Confidence 9999998788899999999999999998 765543238899999999999999854 567788888888888873
No 40
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.77 E-value=1e-18 Score=153.88 Aligned_cols=139 Identities=19% Similarity=0.209 Sum_probs=117.7
Q ss_pred CCCcccccceecCCCcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCC
Q 012745 35 RDVCKWQGIKECLNGRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKF 113 (457)
Q Consensus 35 ~~~c~~~gv~~c~~~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~ 113 (457)
.|.|.|.++. +++|+++ .+|.. ..++|+.|+|++|+|++.++ .|.++++|++|+|++|+|++..
T Consensus 4 ~C~C~~~~l~-----------~~~~~l~-~~p~~---~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 68 (177)
T 2o6r_A 4 RCSCSGTEIR-----------CNSKGLT-SVPTG---IPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLP 68 (177)
T ss_dssp TCEEETTEEE-----------CCSSCCS-SCCTT---CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCC
T ss_pred CCEeCCCEEE-----------ecCCCCc-cCCCC---CCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeC
Confidence 3666666544 5667777 77752 24789999999999998887 6789999999999999999877
Q ss_pred CccCCCCCCCCEEEeeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCCCchh
Q 012745 114 PGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPVTPA 188 (457)
Q Consensus 114 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~ 188 (457)
+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|++.++.. .+++|+.|+|++|++++.+|....
T Consensus 69 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l~~ 145 (177)
T 2o6r_A 69 DGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDY 145 (177)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHHHHH
T ss_pred hhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCccHHH
Confidence 777899999999999999999887778899999999999999999877754 689999999999999987764333
No 41
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.77 E-value=9e-19 Score=162.02 Aligned_cols=150 Identities=16% Similarity=0.164 Sum_probs=129.9
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCc-ccccCC-CCcCCCCCcEEEccC-CccccCCCccCCCCCCCCE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNS-ISGQIP-NLLGLVNLKSLYLND-NNFSGKFPGSLSSLHRLKI 125 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~-l~~~~~-~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~ 125 (457)
.++++|+|++|+++ .+|+..|..+++|+.|+|++|+ ++.+++ .|.++++|++|+|++ |+|++..+..|..+++|++
T Consensus 31 ~~l~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 31 PSTQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp TTCCEEEEESCCCS-EECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CcccEEEEeCCcce-EECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 57999999999999 7888789999999999999997 998888 889999999999999 9999877788999999999
Q ss_pred EEeeccccCCCCcccccCCCccc---eeecccc-cccCCCCCC--CCCCCc-EEEeecCcceecCCCchhhhccCccccc
Q 012745 126 IVLANNQISGPIPESLSNLKRLY---MLYLQDN-KFTGPIPPF--NQTNLR-FFNVSNNDLSGQIPVTPALVRFNASSFL 198 (457)
Q Consensus 126 L~Ls~N~l~~~~p~~~~~l~~L~---~L~l~~N-~l~~~~~~~--~~~~L~-~L~l~~N~l~~~~p~~~~l~~l~~~~~~ 198 (457)
|+|++|++++ +|. |..+++|+ +|++++| .+++.++.. .+++|+ .|++++|+++..++......++..+.+.
T Consensus 110 L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~ 187 (239)
T 2xwt_C 110 LGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLN 187 (239)
T ss_dssp EEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECT
T ss_pred EeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcC
Confidence 9999999996 666 88889998 9999999 998777653 788999 9999999999665533233567777777
Q ss_pred cCc
Q 012745 199 LNI 201 (457)
Q Consensus 199 ~n~ 201 (457)
+|.
T Consensus 188 ~n~ 190 (239)
T 2xwt_C 188 KNK 190 (239)
T ss_dssp TCT
T ss_pred CCC
Confidence 774
No 42
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.77 E-value=1e-18 Score=183.49 Aligned_cols=150 Identities=15% Similarity=0.190 Sum_probs=133.6
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
.+++.|++++|.+. .+|+..|..+++|+.|+|++|.|++.++ .|.++++|++|+|++|.|++..|..|+++++|++|+
T Consensus 51 ~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 51 NNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp CCCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 56889999999999 8998889999999999999999999988 899999999999999999998888899999999999
Q ss_pred eeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCCCchhhhccCccccccCc
Q 012745 128 LANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNI 201 (457)
Q Consensus 128 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~ 201 (457)
|++|.|++..+..|..+++|++|+|++|.|++.+|.. .+++|+.|+|++|.+++..+ ..+.++..+.+.+|.
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~l~~L~~L~l~~n~ 203 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDL--SLIPSLFHANVSYNL 203 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCG--GGCTTCSEEECCSSC
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcCh--hhhhhhhhhhcccCc
Confidence 9999999776677899999999999999999888764 78999999999999998654 566677666666654
No 43
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.77 E-value=1.7e-18 Score=175.63 Aligned_cols=150 Identities=23% Similarity=0.251 Sum_probs=108.8
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
++++.|+|++|+|+ .+++..|.++++|+.|+|++|.|++.++ .|.++++|++|+|++|+|++..+..|..+++|++|+
T Consensus 75 ~~l~~L~L~~n~i~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 153 (452)
T 3zyi_A 75 SNTRYLNLMENNIQ-MIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELW 153 (452)
T ss_dssp TTCSEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEE
T ss_pred CCccEEECcCCcCc-eECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEE
Confidence 47899999999999 6766799999999999999999999887 899999999999999999987777899999999999
Q ss_pred eeccccCCCCcccccCCCccceeeccccc-ccCCCCCC--CCCCCcEEEeecCcceecCCCchhhhccCccccccC
Q 012745 128 LANNQISGPIPESLSNLKRLYMLYLQDNK-FTGPIPPF--NQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLN 200 (457)
Q Consensus 128 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n 200 (457)
|++|+|+...+..|..+++|++|+|++|+ +....+.. .+++|+.|+|++|++++. |....+.++..+.+.+|
T Consensus 154 L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N 228 (452)
T 3zyi_A 154 LRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNLTPLVGLEELEMSGN 228 (452)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCCTTCTTCCEEECTTS
T ss_pred CCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-ccccccccccEEECcCC
Confidence 99999986666566666666666666532 32222211 444555555555555433 22333344444444443
No 44
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.77 E-value=1.9e-18 Score=167.64 Aligned_cols=151 Identities=17% Similarity=0.249 Sum_probs=101.6
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCC---------
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSS--------- 119 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--------- 119 (457)
++|++|+|++|.++ .+|. .+..+++|++|+|++|.|+.+++.+.++++|++|+|++|++.+.+|..+..
T Consensus 104 ~~L~~L~L~~n~l~-~lp~-~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~ 181 (328)
T 4fcg_A 104 SHLQHMTIDAAGLM-ELPD-TMQQFAGLETLTLARNPLRALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQG 181 (328)
T ss_dssp TTCSEEEEESSCCC-CCCS-CGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEE
T ss_pred CCCCEEECCCCCcc-chhH-HHhccCCCCEEECCCCccccCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhcc
Confidence 46777777777777 7765 667777777777777777744446777777777777777776677766543
Q ss_pred CCCCCEEEeeccccCCCCcccccCCCccceeecccccccCCCCCC-CCCCCcEEEeecCcceecCCC-chhhhccCcccc
Q 012745 120 LHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF-NQTNLRFFNVSNNDLSGQIPV-TPALVRFNASSF 197 (457)
Q Consensus 120 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~~~~p~-~~~l~~l~~~~~ 197 (457)
+++|++|+|++|+|+ .+|..+..+++|++|+|++|++++.++.. .+++|+.|+|++|++.+.+|. +..+.++..+.+
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L 260 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLIL 260 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEEC
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEEC
Confidence 777777777777776 56666777777777777777777654444 566777777777766666653 334455556666
Q ss_pred ccCcC
Q 012745 198 LLNIN 202 (457)
Q Consensus 198 ~~n~~ 202 (457)
.+|..
T Consensus 261 ~~n~~ 265 (328)
T 4fcg_A 261 KDCSN 265 (328)
T ss_dssp TTCTT
T ss_pred CCCCc
Confidence 65543
No 45
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.77 E-value=1.2e-18 Score=166.89 Aligned_cols=113 Identities=27% Similarity=0.353 Sum_probs=89.3
Q ss_pred HhcccccCCccEEEEEEe------cCCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEE
Q 012745 339 SAETLGRGTIGSTYKAVL------ESGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYD 411 (457)
Q Consensus 339 ~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 411 (457)
..+.||+|+||.||+|.+ .+++.||||+++.... ...++|.+|+.++++++|||||+++|+|..++..++|||
T Consensus 30 ~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E 109 (308)
T 4gt4_A 30 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFS 109 (308)
T ss_dssp EEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEE
Confidence 346799999999999985 2468999999976543 346789999999999999999999999999999999999
Q ss_pred ecCCCchHHHhhhCCCC-----------CCchhhHHHH--HHHHHHHHHHhcC
Q 012745 412 YFPNGSLFSLIHGTCCL-----------ATRPLFIFLF--SFFRLIKKVFQMS 451 (457)
Q Consensus 412 y~~~GsL~~~l~~~~~~-----------~~~~l~~~~r--~~~~i~~~v~~~~ 451 (457)
||++|||.++|+.+... ....++|..+ .+.||+.||++++
T Consensus 110 y~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH 162 (308)
T 4gt4_A 110 YCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS 162 (308)
T ss_dssp CCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999864311 1124666553 5667777777754
No 46
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.77 E-value=1.2e-18 Score=177.89 Aligned_cols=152 Identities=18% Similarity=0.158 Sum_probs=117.1
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
.+++.|+|++|+|+ .+++..|..+++|++|+|++|.|++..+ .|.++++|++|+|++|+|++..+..|.++++|++|+
T Consensus 32 ~~l~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 110 (477)
T 2id5_A 32 TETRLLDLGKNRIK-TLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLD 110 (477)
T ss_dssp TTCSEEECCSSCCC-EECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEE
T ss_pred CCCcEEECCCCccc-eECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEE
Confidence 46788888888888 6666688888888888888888888777 788888888888888888866666788888888888
Q ss_pred eeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCCC-chhhhccCccccccCc
Q 012745 128 LANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPV-TPALVRFNASSFLLNI 201 (457)
Q Consensus 128 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~-~~~l~~l~~~~~~~n~ 201 (457)
|++|++++..|..|..+++|++|+|++|.+++..+.. .+++|+.|+|++|++++.++. +..+.++..+.+.+|.
T Consensus 111 Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 187 (477)
T 2id5_A 111 ISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLN 187 (477)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCC
T ss_pred CCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCc
Confidence 8888888777888888888888888888888766544 677888888888888765541 2234445555555554
No 47
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.77 E-value=1.4e-18 Score=175.58 Aligned_cols=154 Identities=24% Similarity=0.265 Sum_probs=112.6
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CC-------------------------cCCCCCcEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NL-------------------------LGLVNLKSL 102 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~-------------------------~~l~~L~~L 102 (457)
++|++|+|++|+|+ .+++..|..+++|+.|+|++|.|+..++ .| .++++|++|
T Consensus 112 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 190 (440)
T 3zyj_A 112 ANLNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYL 190 (440)
T ss_dssp SSCCEEECCSSCCS-SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEE
T ss_pred ccCCEEECCCCcCC-eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCee
Confidence 56788888888887 6776677777888888888777776554 44 445555566
Q ss_pred EccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcce
Q 012745 103 YLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLS 180 (457)
Q Consensus 103 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~ 180 (457)
+|++|+|+ .+| .+..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+.. .+++|+.|+|++|+|+
T Consensus 191 ~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 268 (440)
T 3zyj_A 191 NLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT 268 (440)
T ss_dssp ECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCC
T ss_pred cCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCC
Confidence 66666665 333 3566677777777777777666777788888888888888887766654 6788999999999998
Q ss_pred ecCCC-chhhhccCccccccCcCcCC
Q 012745 181 GQIPV-TPALVRFNASSFLLNINLCG 205 (457)
Q Consensus 181 ~~~p~-~~~l~~l~~~~~~~n~~~c~ 205 (457)
+.++. +..+.++..+.+.+||+.|.
T Consensus 269 ~~~~~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 269 LLPHDLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp CCCTTTTSSCTTCCEEECCSSCEECS
T ss_pred ccChhHhccccCCCEEEcCCCCccCC
Confidence 77663 24567788889999999885
No 48
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.77 E-value=2.2e-18 Score=181.16 Aligned_cols=152 Identities=22% Similarity=0.232 Sum_probs=129.6
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
+++++|+|++|+++ .+++..|.++++|++|+|++|.|++.++ .|.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 32 ~~l~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 32 SSTKNIDLSFNPLK-ILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp TTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCcCEEECCCCCcC-EeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 57999999999999 6777789999999999999999999888 789999999999999999988899999999999999
Q ss_pred eeccccCCCCcccccCCCccceeecccccccC-CCCCC--CCCCCcEEEeecCcceecCCC-chhhhccC----cccccc
Q 012745 128 LANNQISGPIPESLSNLKRLYMLYLQDNKFTG-PIPPF--NQTNLRFFNVSNNDLSGQIPV-TPALVRFN----ASSFLL 199 (457)
Q Consensus 128 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~~~~--~~~~L~~L~l~~N~l~~~~p~-~~~l~~l~----~~~~~~ 199 (457)
|++|.+++..+..|+.+++|++|+|++|.+++ .+|.. .+++|+.|++++|++++..|. +..+.++. .+.+.+
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~ 190 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSL 190 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTT
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccC
Confidence 99999998777889999999999999999986 33543 889999999999999988763 33444433 344444
Q ss_pred Cc
Q 012745 200 NI 201 (457)
Q Consensus 200 n~ 201 (457)
|.
T Consensus 191 n~ 192 (606)
T 3vq2_A 191 NP 192 (606)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 49
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.76 E-value=1.4e-18 Score=176.18 Aligned_cols=156 Identities=16% Similarity=0.134 Sum_probs=131.7
Q ss_pred CcEeEEEeCCCCCccccChhhhcC---------------------------------------CCCCCEEEeecCccccc
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQ---------------------------------------LDQLRVLSFKGNSISGQ 89 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~---------------------------------------l~~L~~L~L~~N~l~~~ 89 (457)
++|++|+|++|++++.+|. .+.. .++|+.|+|++|.+++.
T Consensus 212 ~~L~~L~Ls~n~l~~~~~~-~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 290 (455)
T 3v47_A 212 TSITTLDLSGNGFKESMAK-RFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFAL 290 (455)
T ss_dssp CEEEEEECTTSCCCHHHHH-HHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEE
T ss_pred ceeeeEecCCCcccccchh-hhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCcccccc
Confidence 5789999999988755543 2211 25799999999999988
Q ss_pred CC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccCCCccceeecccccccCCCCCC--CC
Q 012745 90 IP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQ 166 (457)
Q Consensus 90 ~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~ 166 (457)
++ .|..+++|++|+|++|++++..|..|..+++|++|+|++|.+++..|..|..+++|++|+|++|+|++..|.. .+
T Consensus 291 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 370 (455)
T 3v47_A 291 LKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGL 370 (455)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred chhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcccc
Confidence 87 7889999999999999999888889999999999999999998888888999999999999999999876654 78
Q ss_pred CCCcEEEeecCcceecCCC-chhhhccCccccccCcCcCC
Q 012745 167 TNLRFFNVSNNDLSGQIPV-TPALVRFNASSFLLNINLCG 205 (457)
Q Consensus 167 ~~L~~L~l~~N~l~~~~p~-~~~l~~l~~~~~~~n~~~c~ 205 (457)
++|+.|+|++|+|++.++. +..+.++..+.+.+|+..|.
T Consensus 371 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 410 (455)
T 3v47_A 371 PNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 410 (455)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccC
Confidence 9999999999999987763 35677888889999998875
No 50
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.76 E-value=2.3e-18 Score=174.62 Aligned_cols=155 Identities=23% Similarity=0.234 Sum_probs=119.1
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-C-------------------------CcCCCCCcEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-N-------------------------LLGLVNLKSL 102 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~-------------------------~~~l~~L~~L 102 (457)
++|++|+|++|+|+ .+|+..|..+++|++|+|++|.|+..++ . |.++++|++|
T Consensus 123 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 201 (452)
T 3zyi_A 123 ASLNTLELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYL 201 (452)
T ss_dssp TTCCEEECCSSCCS-BCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEE
T ss_pred ccCCEEECCCCcCC-ccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEE
Confidence 57888888888888 6777677778888888888887776554 3 4456666666
Q ss_pred EccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcce
Q 012745 103 YLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLS 180 (457)
Q Consensus 103 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~ 180 (457)
+|++|+|++ +| .+..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+.. .+++|+.|+|++|+|+
T Consensus 202 ~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 279 (452)
T 3zyi_A 202 NLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLS 279 (452)
T ss_dssp ECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred ECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCC
Confidence 666777764 33 4677778888888888888777888888888999999999888776654 7889999999999999
Q ss_pred ecCCC-chhhhccCccccccCcCcCCC
Q 012745 181 GQIPV-TPALVRFNASSFLLNINLCGE 206 (457)
Q Consensus 181 ~~~p~-~~~l~~l~~~~~~~n~~~c~~ 206 (457)
+.++. +..+.++..+.+.+||+.|.-
T Consensus 280 ~~~~~~~~~l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 280 SLPHDLFTPLRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp CCCTTSSTTCTTCCEEECCSSCEECST
T ss_pred ccChHHhccccCCCEEEccCCCcCCCC
Confidence 77763 345677888899999998853
No 51
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.76 E-value=1.2e-18 Score=183.18 Aligned_cols=157 Identities=17% Similarity=0.188 Sum_probs=106.2
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCcccc-CCCccCCCCCCCCEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSG-KFPGSLSSLHRLKII 126 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L 126 (457)
++|+.|+|++|.+.+..|...+..+++|+.|+|++|.+++..+ .+.++++|++|+|++|++++ .+|..|..+++|+.|
T Consensus 399 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 478 (606)
T 3vq2_A 399 EELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFL 478 (606)
T ss_dssp TTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEE
Confidence 4566666666666633332456666777777777777766555 56677777777777777775 356677777777777
Q ss_pred EeeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCCCchhhh-ccCccccccCcCc
Q 012745 127 VLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPVTPALV-RFNASSFLLNINL 203 (457)
Q Consensus 127 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~l~-~l~~~~~~~n~~~ 203 (457)
+|++|++++..|..|..+++|++|+|++|++++.+|.. .+++|+.|+|++|+|+..++....+. ++..+.+.+|++.
T Consensus 479 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~ 558 (606)
T 3vq2_A 479 DLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVA 558 (606)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCC
T ss_pred ECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcc
Confidence 77777777666777777777777777777777665543 56777777777777776555444454 3677777788777
Q ss_pred CC
Q 012745 204 CG 205 (457)
Q Consensus 204 c~ 205 (457)
|.
T Consensus 559 c~ 560 (606)
T 3vq2_A 559 CI 560 (606)
T ss_dssp CS
T ss_pred cC
Confidence 74
No 52
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.75 E-value=3.6e-18 Score=172.58 Aligned_cols=150 Identities=24% Similarity=0.283 Sum_probs=106.7
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
.+++.|+|++|+|+ .+++..|.++++|+.|+|++|.|++..+ .|.++++|++|+|++|+|+...+..|..+++|++|+
T Consensus 64 ~~l~~L~L~~n~i~-~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 142 (440)
T 3zyj_A 64 TNTRLLNLHENQIQ-IIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELW 142 (440)
T ss_dssp TTCSEEECCSCCCC-EECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEE
T ss_pred CCCcEEEccCCcCC-eeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceee
Confidence 46888999999999 6777789999999999999999998877 788899999999999999977777888999999999
Q ss_pred eeccccCCCCcccccCCCccceeecccccccCCCCC-C--CCCCCcEEEeecCcceecCCCchhhhccCccccccC
Q 012745 128 LANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPP-F--NQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLN 200 (457)
Q Consensus 128 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~--~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n 200 (457)
|++|+|+...+..|..+++|++|+|++|+..+.++. . .+++|+.|+|++|.++.. |....+.+|..+.+.+|
T Consensus 143 L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N 217 (440)
T 3zyj_A 143 LRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-PNLTPLIKLDELDLSGN 217 (440)
T ss_dssp CCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC-CCCTTCSSCCEEECTTS
T ss_pred CCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc-cccCCCcccCEEECCCC
Confidence 999988866665666666666666666332222222 1 445555555555555532 33334444444444444
No 53
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.75 E-value=3.4e-18 Score=173.28 Aligned_cols=141 Identities=21% Similarity=0.219 Sum_probs=129.5
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
++++.|+|++|.+.+ +++..|..+++|+.|+|++|+|++.++ .|.++++|++|+|++|++++..|..|..+++|++|+
T Consensus 275 ~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 353 (455)
T 3v47_A 275 SGVKTCDLSKSKIFA-LLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLD 353 (455)
T ss_dssp SCCCEEECCSSCCCE-ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEE
T ss_pred cCceEEEecCccccc-cchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEE
Confidence 579999999999994 445589999999999999999999988 899999999999999999988899999999999999
Q ss_pred eeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCCCchhhh
Q 012745 128 LANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPVTPALV 190 (457)
Q Consensus 128 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~l~ 190 (457)
|++|++++..|..|..+++|++|+|++|+|++.++.. .+++|+.|+|++|++++.+|....+.
T Consensus 354 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~ 418 (455)
T 3v47_A 354 LSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLS 418 (455)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHH
T ss_pred CCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcchHHH
Confidence 9999999888999999999999999999999877654 78999999999999999999665543
No 54
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.75 E-value=2.7e-18 Score=187.37 Aligned_cols=152 Identities=22% Similarity=0.264 Sum_probs=127.2
Q ss_pred EeEEEeCCCCCccccCh-hhhcCCCCCCEEEeecCcccccCC--CCcCCCCCcEEEccCCccc-----cCCCccCCCCCC
Q 012745 51 VTKLVLEHLNLTGTLDE-KVINQLDQLRVLSFKGNSISGQIP--NLLGLVNLKSLYLNDNNFS-----GKFPGSLSSLHR 122 (457)
Q Consensus 51 l~~L~L~~n~l~~~l~~-~~~~~l~~L~~L~L~~N~l~~~~~--~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~ 122 (457)
++.|++++|+++ .++. ..+..+++|+.|+|++|++++..+ .+..+++|+.|+|++|.++ +..+..|..+++
T Consensus 403 l~~L~ls~N~l~-~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~ 481 (844)
T 3j0a_A 403 ANLIHLSENRLE-NLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSH 481 (844)
T ss_dssp CCEEECCSCCCC-SSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCC
T ss_pred cceeecccCccc-cCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCccc
Confidence 344444444444 2221 235588999999999999997765 4677899999999999997 445567899999
Q ss_pred CCEEEeeccccCCCCcccccCCCccceeecccccccCCCCCCCCCCCcEEEeecCcceecCCCchhhhccCccccccCcC
Q 012745 123 LKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPFNQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNIN 202 (457)
Q Consensus 123 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~ 202 (457)
|+.|+|++|+|++..|..|..+++|+.|+|++|+|++.++....++|+.|+|++|+|++.+| ..+.++..+.+.+||+
T Consensus 482 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~--~~~~~L~~l~l~~Np~ 559 (844)
T 3j0a_A 482 LQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNP--DVFVSLSVLDITHNKF 559 (844)
T ss_dssp EECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCS--CCCSSCCEEEEEEECC
T ss_pred ccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCCh--hHhCCcCEEEecCCCc
Confidence 99999999999999999999999999999999999988777755899999999999999999 5577899999999999
Q ss_pred cCC
Q 012745 203 LCG 205 (457)
Q Consensus 203 ~c~ 205 (457)
.|.
T Consensus 560 ~C~ 562 (844)
T 3j0a_A 560 ICE 562 (844)
T ss_dssp CCS
T ss_pred ccc
Confidence 994
No 55
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.75 E-value=1.3e-18 Score=151.76 Aligned_cols=135 Identities=22% Similarity=0.246 Sum_probs=119.0
Q ss_pred CCcEeEEEeCCCCCc-cccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEE
Q 012745 48 NGRVTKLVLEHLNLT-GTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKII 126 (457)
Q Consensus 48 ~~~l~~L~L~~n~l~-~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 126 (457)
.++|++|+|++|+++ +.+|. .+..+++|+.|+|++|.|++. +.+..+++|++|+|++|++++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~-~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEG-LTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSS-CCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHH-HHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 368999999999998 78876 688999999999999999977 788999999999999999998788888889999999
Q ss_pred EeeccccCCCC-cccccCCCccceeecccccccCCCC----CC-CCCCCcEEEeecCcceecCC
Q 012745 127 VLANNQISGPI-PESLSNLKRLYMLYLQDNKFTGPIP----PF-NQTNLRFFNVSNNDLSGQIP 184 (457)
Q Consensus 127 ~Ls~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~~----~~-~~~~L~~L~l~~N~l~~~~p 184 (457)
+|++|+|++.. +..+..+++|++|++++|++++.++ .. .+++|+.|++++|.+...+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 164 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPD 164 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCCS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhccc
Confidence 99999998643 2789999999999999999998766 22 78999999999999876543
No 56
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.74 E-value=2.3e-18 Score=178.72 Aligned_cols=151 Identities=19% Similarity=0.189 Sum_probs=126.3
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
++|++|+|++|+++ .+++..|.++++|++|+|++|+|++.++ .|.++++|++|+|++|++++..|..|..+++|++|+
T Consensus 26 ~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 104 (549)
T 2z81_A 26 AAMKSLDLSFNKIT-YIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLN 104 (549)
T ss_dssp TTCCEEECCSSCCC-EECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEE
T ss_pred CCccEEECcCCccC-ccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEE
Confidence 47999999999999 6666689999999999999999999987 899999999999999999987777799999999999
Q ss_pred eeccccCC-CCcccccCCCccceeecccccccCCCC-CC--CCCCCcEEEeecCcceecCCC-chhhhccCccccccC
Q 012745 128 LANNQISG-PIPESLSNLKRLYMLYLQDNKFTGPIP-PF--NQTNLRFFNVSNNDLSGQIPV-TPALVRFNASSFLLN 200 (457)
Q Consensus 128 Ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~--~~~~L~~L~l~~N~l~~~~p~-~~~l~~l~~~~~~~n 200 (457)
|++|.+++ ..|..|..+++|++|++++|.+.+.++ .. .+++|+.|++++|.+++..|. ...+.++..+.+.+|
T Consensus 105 Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n 182 (549)
T 2z81_A 105 LMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLS 182 (549)
T ss_dssp CTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECS
T ss_pred CCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccC
Confidence 99999986 357789999999999999999544444 22 789999999999999987762 223333444444444
No 57
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.74 E-value=8.1e-18 Score=176.76 Aligned_cols=152 Identities=20% Similarity=0.140 Sum_probs=132.0
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
.++++|+|++|.|+ .+++..|.++++|++|+|++|+|++..| .|.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 33 ~~l~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 111 (606)
T 3t6q_A 33 NSTECLEFSFNVLP-TIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLF 111 (606)
T ss_dssp TTCCEEECTTCCCS-EECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEE
T ss_pred CcCcEEEccCCccC-cCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEee
Confidence 57999999999999 6767799999999999999999999888 899999999999999999999999999999999999
Q ss_pred eeccccCCCCcccccCCCccceeecccccccCCC-CCC-CCCCCcEEEeecCcceecCCC-chhhhccC--ccccccCc
Q 012745 128 LANNQISGPIPESLSNLKRLYMLYLQDNKFTGPI-PPF-NQTNLRFFNVSNNDLSGQIPV-TPALVRFN--ASSFLLNI 201 (457)
Q Consensus 128 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~~~-~~~~L~~L~l~~N~l~~~~p~-~~~l~~l~--~~~~~~n~ 201 (457)
|++|++++..|..|..+++|++|+|++|++++.. |.. .+++|+.|++++|.+++..|. +..+.++. .+.+.+|.
T Consensus 112 L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~ 190 (606)
T 3t6q_A 112 FIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGND 190 (606)
T ss_dssp CTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCC
T ss_pred ccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCc
Confidence 9999999877888999999999999999999753 443 789999999999999988761 22334444 45555664
No 58
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.74 E-value=1e-17 Score=149.70 Aligned_cols=122 Identities=22% Similarity=0.310 Sum_probs=110.9
Q ss_pred CCCcccccceecCC-----------CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEE
Q 012745 35 RDVCKWQGIKECLN-----------GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSL 102 (457)
Q Consensus 35 ~~~c~~~gv~~c~~-----------~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L 102 (457)
.|.|.+..+. |.. .++++|+|++|+|+ .+|. .|..+++|+.|+|++|.|++.++ .|.++++|++|
T Consensus 7 ~C~C~~~~l~-~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~-~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L 83 (193)
T 2wfh_A 7 ECTCLDTVVR-CSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPK-ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTL 83 (193)
T ss_dssp TCEEETTEEE-CTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCG-GGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCEeCCCEEE-cCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHH-HhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEE
Confidence 4677777777 653 47999999999999 8984 89999999999999999999888 79999999999
Q ss_pred EccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccCCCccceeecccccccC
Q 012745 103 YLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTG 159 (457)
Q Consensus 103 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 159 (457)
+|++|+|++..|..|..+++|+.|+|++|+|+...+..|..+++|+.|+|++|++..
T Consensus 84 ~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 84 ILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp ECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 999999998888899999999999999999997777789999999999999999974
No 59
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.73 E-value=4.6e-18 Score=162.40 Aligned_cols=106 Identities=21% Similarity=0.329 Sum_probs=85.2
Q ss_pred HhcccccCCccEEEEEEecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCC
Q 012745 339 SAETLGRGTIGSTYKAVLESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNG 416 (457)
Q Consensus 339 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~G 416 (457)
..+.||+|+||.||+|++.+ .||||+++.... ...+.|.+|+.+|++++|||||+++|+|.. +..+||||||++|
T Consensus 40 l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gG 116 (307)
T 3omv_A 40 LSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGS 116 (307)
T ss_dssp EEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSC
T ss_pred EeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCC
Confidence 46789999999999998753 589999975532 345689999999999999999999998864 5689999999999
Q ss_pred chHHHhhhCCCCCCchhhHHH--HHHHHHHHHHHhcC
Q 012745 417 SLFSLIHGTCCLATRPLFIFL--FSFFRLIKKVFQMS 451 (457)
Q Consensus 417 sL~~~l~~~~~~~~~~l~~~~--r~~~~i~~~v~~~~ 451 (457)
+|.++|+.... .++|.. +.+.||+.|++++|
T Consensus 117 sL~~~l~~~~~----~l~~~~~~~i~~qia~gL~yLH 149 (307)
T 3omv_A 117 SLYKHLHVQET----KFQMFQLIDIARQTAQGMDYLH 149 (307)
T ss_dssp BHHHHHHTSCC----CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHhhcCC----CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999987531 245543 35667888877754
No 60
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.73 E-value=2.9e-18 Score=175.42 Aligned_cols=151 Identities=21% Similarity=0.126 Sum_probs=103.2
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCC-----------------CcCCCCCcEEEccCCcccc
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPN-----------------LLGLVNLKSLYLNDNNFSG 111 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~-----------------~~~l~~L~~L~Ls~N~l~~ 111 (457)
++|++|+|++|.+++.. + |..+++|+.|+|++|.|++.++. ...+++|+.|+|++|.|++
T Consensus 58 ~~L~~L~Ls~N~l~~~~-~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~ 134 (487)
T 3oja_A 58 TKLELLNLSSNVLYETL-D--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITM 134 (487)
T ss_dssp TTCCEEECTTSCCEEEE-E--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEECCCSSCEEEECCSSCCCS
T ss_pred CCCCEEEeeCCCCCCCc-c--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCccccCCCCEEECCCCCCCC
Confidence 45666666666666332 2 56666666666666666554321 1124556666666677776
Q ss_pred CCCccCCCCCCCCEEEeeccccCCCCccccc-CCCccceeecccccccCCCCCCCCCCCcEEEeecCcceecCCCchhhh
Q 012745 112 KFPGSLSSLHRLKIIVLANNQISGPIPESLS-NLKRLYMLYLQDNKFTGPIPPFNQTNLRFFNVSNNDLSGQIPVTPALV 190 (457)
Q Consensus 112 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~l~ 190 (457)
..|..|..+++|+.|+|++|.|++..|..+. .+++|+.|+|++|.|++.++...+++|+.|+|++|.|++.+|.+..+.
T Consensus 135 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~ 214 (487)
T 3oja_A 135 LRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFMGPEFQSAA 214 (487)
T ss_dssp GGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCEECGGGGGGT
T ss_pred CCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccccCCCCCEEECCCCCCCCCCHhHcCCC
Confidence 6666777777788888888887776676665 677888888888887776555577888888888888888777666677
Q ss_pred ccCccccccCcC
Q 012745 191 RFNASSFLLNIN 202 (457)
Q Consensus 191 ~l~~~~~~~n~~ 202 (457)
++..+.+.+|..
T Consensus 215 ~L~~L~Ls~N~l 226 (487)
T 3oja_A 215 GVTWISLRNNKL 226 (487)
T ss_dssp TCSEEECTTSCC
T ss_pred CccEEEecCCcC
Confidence 777777777753
No 61
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.73 E-value=8.8e-18 Score=178.98 Aligned_cols=151 Identities=24% Similarity=0.173 Sum_probs=107.5
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
+++++|+|++|+++ .+++..|.++++|++|+|++|.+++.++ .|.++++|++|+|++|++++..+..|.++++|++|+
T Consensus 25 ~~l~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 25 TNITVLNLTHNQLR-RLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp TTCSEEECCSSCCC-CCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCcEEECCCCCCC-CcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 46777888888877 5666677777788888888887777766 567777888888888877755555677777888888
Q ss_pred eeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCCCch---hhhccCccccccC
Q 012745 128 LANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPVTP---ALVRFNASSFLLN 200 (457)
Q Consensus 128 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~---~l~~l~~~~~~~n 200 (457)
|++|++++..|..|..+++|++|+|++|.+++.++.. .+++|+.|++++|.+++..+..- ....+..+.+.+|
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n 181 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSN 181 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCC
Confidence 8888777666677777777888888887777666554 67777777777777776655211 1234555555555
No 62
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.73 E-value=2.4e-18 Score=165.74 Aligned_cols=149 Identities=20% Similarity=0.189 Sum_probs=100.8
Q ss_pred CcEeEEEeCCCCCccccChhhhcCC-----CCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccC--CCccC--C
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQL-----DQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGK--FPGSL--S 118 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l-----~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~--~p~~~--~ 118 (457)
++|++|+|++|+++ .+|. .+..+ ++|++|+|++|+|++.++ .|.++++|++|+|++|++++. .|..+ .
T Consensus 121 ~~L~~L~Ls~N~l~-~~~~-~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 121 PDLNILNLRNVSWA-TRDA-WLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp CCCSEEEEESCBCS-SSSS-HHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCccEEEccCCCCc-chhH-HHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 57888888888887 3453 66665 788888888888887776 777788888888888887654 23333 6
Q ss_pred CCCCCCEEEeeccccCCC--Cc-ccccCCCccceeecccccccCCCCCC---CCCCCcEEEeecCcceecCCCchhhhcc
Q 012745 119 SLHRLKIIVLANNQISGP--IP-ESLSNLKRLYMLYLQDNKFTGPIPPF---NQTNLRFFNVSNNDLSGQIPVTPALVRF 192 (457)
Q Consensus 119 ~l~~L~~L~Ls~N~l~~~--~p-~~~~~l~~L~~L~l~~N~l~~~~~~~---~~~~L~~L~l~~N~l~~~~p~~~~l~~l 192 (457)
.+++|++|+|++|+|++. ++ ..+..+++|++|+|++|+|++.+|.. .+++|+.|+|++|+|+..+.... .++
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~--~~L 276 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPKGLP--AKL 276 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSSCCSSCC--SEE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccChhhhhcc--CCc
Confidence 777888888888877731 11 23456677888888888877755322 46777777777777774333222 566
Q ss_pred CccccccCc
Q 012745 193 NASSFLLNI 201 (457)
Q Consensus 193 ~~~~~~~n~ 201 (457)
..+.+.+|.
T Consensus 277 ~~L~Ls~N~ 285 (312)
T 1wwl_A 277 SVLDLSYNR 285 (312)
T ss_dssp EEEECCSSC
T ss_pred eEEECCCCC
Confidence 666666665
No 63
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.72 E-value=1.2e-17 Score=170.41 Aligned_cols=152 Identities=18% Similarity=0.166 Sum_probs=128.2
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
++|++|+|++|.++ .+++..|.++++|+.|+|++|+|+..++ .|.++++|++|+|++|++++..|..|..+++|+.|+
T Consensus 56 ~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 56 PHLEELELNENIVS-AVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp TTCCEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccC-EeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 68999999999999 5655689999999999999999998877 678899999999999999988888999999999999
Q ss_pred eeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCC-CchhhhccCccccccCc
Q 012745 128 LANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIP-VTPALVRFNASSFLLNI 201 (457)
Q Consensus 128 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p-~~~~l~~l~~~~~~~n~ 201 (457)
|++|.+++..|..|..+++|+.|+|++|++++.++.. .+++|+.|+|++|.+++..+ .+..+.++..+.+.+|.
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~ 211 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWP 211 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCT
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCc
Confidence 9999998888888999999999999999998765543 78889999999999888765 23445556666666654
No 64
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.72 E-value=9.5e-18 Score=155.10 Aligned_cols=151 Identities=17% Similarity=0.140 Sum_probs=130.4
Q ss_pred CcEeEEEeCCCC-CccccChhhhcCCCCCCEEEeec-CcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCC-
Q 012745 49 GRVTKLVLEHLN-LTGTLDEKVINQLDQLRVLSFKG-NSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLK- 124 (457)
Q Consensus 49 ~~l~~L~L~~n~-l~~~l~~~~~~~l~~L~~L~L~~-N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~- 124 (457)
++|++|+|++|. ++ .+++..|.++++|+.|+|++ |+|++.++ .|.++++|++|+|++|++++ +|. |..+++|+
T Consensus 55 ~~L~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp TTCCEEEEECCSSCC-EECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCcEEeCCCCCCcc-eeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 689999999997 88 88888999999999999999 99998887 78899999999999999996 666 99999999
Q ss_pred --EEEeecc-ccCCCCcccccCCCccc-eeecccccccCCCCCC-CCCCCcEEEeecCc-ceecCCC-chhh-hccCccc
Q 012745 125 --IIVLANN-QISGPIPESLSNLKRLY-MLYLQDNKFTGPIPPF-NQTNLRFFNVSNND-LSGQIPV-TPAL-VRFNASS 196 (457)
Q Consensus 125 --~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~-l~~~~p~-~~~l-~~l~~~~ 196 (457)
.|++++| ++++..+..|..+++|+ +|++++|+++..++.. ..++|+.|++++|+ ++...+. +..+ .++..+.
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~ 211 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLD 211 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEE
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEE
Confidence 9999999 99977777899999999 9999999999555443 44789999999995 9987663 3445 6777788
Q ss_pred cccCcC
Q 012745 197 FLLNIN 202 (457)
Q Consensus 197 ~~~n~~ 202 (457)
+.+|..
T Consensus 212 l~~N~l 217 (239)
T 2xwt_C 212 VSQTSV 217 (239)
T ss_dssp CTTCCC
T ss_pred CCCCcc
Confidence 877764
No 65
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.72 E-value=3e-18 Score=164.94 Aligned_cols=130 Identities=18% Similarity=0.138 Sum_probs=58.8
Q ss_pred cEeEEEeCCCCCccccC---hhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccC--C--CccCCCCC
Q 012745 50 RVTKLVLEHLNLTGTLD---EKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGK--F--PGSLSSLH 121 (457)
Q Consensus 50 ~l~~L~L~~n~l~~~l~---~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~--~--p~~~~~l~ 121 (457)
+|++|+|++|.+++..+ ...+..+++|++|+|++|.|++.++ .|.++++|++|+|++|++.+. + +..+..++
T Consensus 118 ~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~ 197 (310)
T 4glp_A 118 ALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFP 197 (310)
T ss_dssp CCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSC
T ss_pred CCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCC
Confidence 45555555555553222 1223345555555555555554444 444555555555555554421 1 11224445
Q ss_pred CCCEEEeeccccCCCCcc----cccCCCccceeecccccccCCCCCC--C---CCCCcEEEeecCcce
Q 012745 122 RLKIIVLANNQISGPIPE----SLSNLKRLYMLYLQDNKFTGPIPPF--N---QTNLRFFNVSNNDLS 180 (457)
Q Consensus 122 ~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~l~~N~l~~~~~~~--~---~~~L~~L~l~~N~l~ 180 (457)
+|++|+|++|+++ .++. .+..+++|++|+|++|+|++..|.. . +++|+.|+|++|+|+
T Consensus 198 ~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~ 264 (310)
T 4glp_A 198 AIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE 264 (310)
T ss_dssp CCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC
T ss_pred CCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC
Confidence 5555555555554 1222 1234455555555555554442221 1 134555555555555
No 66
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.72 E-value=2e-17 Score=172.34 Aligned_cols=154 Identities=16% Similarity=0.171 Sum_probs=130.8
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccC--C-CCcCCCCCcEEEccCCccccCCCc-cCCCCCCCC
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQI--P-NLLGLVNLKSLYLNDNNFSGKFPG-SLSSLHRLK 124 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~--~-~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~ 124 (457)
+++++|+|++|++++.+|. .+..+++|+.|+|++|+|++.+ + .|.++++|++|+|++|++++.+|. .|..+++|+
T Consensus 353 ~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 353 SSFTFLNFTQNVFTDSVFQ-GCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCEEECCSSCCCTTTTT-TCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCceEEECCCCccccchhh-hhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 6899999999999965654 8899999999999999999754 3 688999999999999999984554 588999999
Q ss_pred EEEeeccccCCCCcccccCCCccceeecccccccCCCCCC-CCCCCcEEEeecCcceecCCC-chhhhccCccccccCcC
Q 012745 125 IIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF-NQTNLRFFNVSNNDLSGQIPV-TPALVRFNASSFLLNIN 202 (457)
Q Consensus 125 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~~~~p~-~~~l~~l~~~~~~~n~~ 202 (457)
.|+|++|++++..|..+. ++|+.|+|++|+|+..++.. .+++|+.|+|++|+|+..++. +..+.++..+.+.+|++
T Consensus 432 ~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~ 509 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPW 509 (562)
T ss_dssp EEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCB
T ss_pred EEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCc
Confidence 999999999877666554 79999999999999655544 889999999999999976664 56677888899999998
Q ss_pred cCC
Q 012745 203 LCG 205 (457)
Q Consensus 203 ~c~ 205 (457)
.|.
T Consensus 510 ~c~ 512 (562)
T 3a79_B 510 DCT 512 (562)
T ss_dssp CCC
T ss_pred CCC
Confidence 873
No 67
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.72 E-value=2.1e-17 Score=160.40 Aligned_cols=159 Identities=18% Similarity=0.282 Sum_probs=126.5
Q ss_pred CCcccccceecCC-----------CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEE
Q 012745 36 DVCKWQGIKECLN-----------GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLY 103 (457)
Q Consensus 36 ~~c~~~gv~~c~~-----------~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~ 103 (457)
|.|.|+.+. |.. ++++.|+|++|+++ .+++..|..+++|++|+|++|.|++..+ .|.++++|++|+
T Consensus 29 c~c~l~~l~-~~~~~l~~lp~~~~~~l~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 29 CQCHLRVVQ-CSDLGLEKVPKDLPPDTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp CEEETTEEE-CTTSCCCSCCCSCCTTCCEEECCSSCCC-CBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CcCCCeEEE-ecCCCccccCccCCCCCeEEECCCCcCC-EeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 567888888 653 47899999999999 7777789999999999999999998877 899999999999
Q ss_pred ccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccCCCccceeecccccccC--CCCCC--CCCCCcEEEeecCcc
Q 012745 104 LNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTG--PIPPF--NQTNLRFFNVSNNDL 179 (457)
Q Consensus 104 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~--~~~~L~~L~l~~N~l 179 (457)
|++|+++ .+|..+. ++|++|++++|++++..+..|..+++|++|++++|.++. ..+.. .+++|+.|++++|.+
T Consensus 107 Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 107 LSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp CCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred CCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 9999999 5665554 788889999888887777778888888888888888863 33332 677888888888887
Q ss_pred eecCCCchhhhccCccccccCc
Q 012745 180 SGQIPVTPALVRFNASSFLLNI 201 (457)
Q Consensus 180 ~~~~p~~~~l~~l~~~~~~~n~ 201 (457)
+..+.. .+.++..+.+.+|.
T Consensus 184 ~~l~~~--~~~~L~~L~l~~n~ 203 (330)
T 1xku_A 184 TTIPQG--LPPSLTELHLDGNK 203 (330)
T ss_dssp CSCCSS--CCTTCSEEECTTSC
T ss_pred ccCCcc--ccccCCEEECCCCc
Confidence 765442 23566666666664
No 68
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.72 E-value=6.6e-18 Score=177.46 Aligned_cols=135 Identities=19% Similarity=0.159 Sum_probs=89.7
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC--CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP--NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKII 126 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 126 (457)
++|++|+|++|.+. .+++..|..+++|+.|+|++|++++..+ .+.++++|+.|+|++|.+++..|..|..+++|++|
T Consensus 376 ~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 454 (606)
T 3t6q_A 376 SHLQSLNLSYNEPL-SLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHL 454 (606)
T ss_dssp TTCCEEECCSCSCE-EECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEE
T ss_pred CCCCEEECCCCcCC-cCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEE
Confidence 56777777777777 4444567777777777777777776554 36677777777777777776666667777777777
Q ss_pred EeeccccCC---CCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCC
Q 012745 127 VLANNQISG---PIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIP 184 (457)
Q Consensus 127 ~Ls~N~l~~---~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p 184 (457)
+|++|++++ ..+..+..+++|++|+|++|++++.+|.. .+++|+.|+|++|++++..|
T Consensus 455 ~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 517 (606)
T 3t6q_A 455 NLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSI 517 (606)
T ss_dssp ECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGG
T ss_pred ECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCCh
Confidence 777777654 22345666666666666666666655443 55666666666666665544
No 69
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.72 E-value=2.3e-17 Score=160.26 Aligned_cols=159 Identities=20% Similarity=0.272 Sum_probs=130.6
Q ss_pred CCcccccceecCC-----------CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEE
Q 012745 36 DVCKWQGIKECLN-----------GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLY 103 (457)
Q Consensus 36 ~~c~~~gv~~c~~-----------~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~ 103 (457)
|.|.|+.+. |.. ++++.|+|++|+++ .+++..|.++++|++|+|++|.|++..+ .|.++++|++|+
T Consensus 31 c~c~l~~l~-~~~~~l~~ip~~~~~~l~~L~l~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 31 CHCHLRVVQ-CSDLGLKAVPKEISPDTTLLDLQNNDIS-ELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLY 108 (332)
T ss_dssp CEEETTEEE-CCSSCCSSCCSCCCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEE
T ss_pred CcccCCEEE-CCCCCccccCCCCCCCCeEEECCCCcCC-ccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEE
Confidence 558898888 653 47899999999999 7777789999999999999999998877 899999999999
Q ss_pred ccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccCCCccceeecccccccC--CCCCC--CCCCCcEEEeecCcc
Q 012745 104 LNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTG--PIPPF--NQTNLRFFNVSNNDL 179 (457)
Q Consensus 104 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~~~~--~~~~L~~L~l~~N~l 179 (457)
|++|+++ .+|..+. ++|++|+|++|++++..+..|..+++|+.|++++|.++. ..+.. .+ +|+.|++++|++
T Consensus 109 L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l 184 (332)
T 2ft3_A 109 ISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKL 184 (332)
T ss_dssp CCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBC
T ss_pred CCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCC
Confidence 9999999 5666555 899999999999997777789999999999999999963 34433 34 888889999988
Q ss_pred eecCCCchhhhccCccccccCcC
Q 012745 180 SGQIPVTPALVRFNASSFLLNIN 202 (457)
Q Consensus 180 ~~~~p~~~~l~~l~~~~~~~n~~ 202 (457)
++.+.. ...++..+.+.+|..
T Consensus 185 ~~l~~~--~~~~L~~L~l~~n~i 205 (332)
T 2ft3_A 185 TGIPKD--LPETLNELHLDHNKI 205 (332)
T ss_dssp SSCCSS--SCSSCSCCBCCSSCC
T ss_pred CccCcc--ccCCCCEEECCCCcC
Confidence 875542 235677777777653
No 70
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.72 E-value=9.4e-18 Score=162.48 Aligned_cols=107 Identities=19% Similarity=0.295 Sum_probs=88.2
Q ss_pred cccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCchH
Q 012745 341 ETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLF 419 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL~ 419 (457)
+.||+|+||.||+|. ..+|+.||||+++.......+.+.+|+.+|++++|||||+++++|.+++..|||||||++|+|.
T Consensus 80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~ 159 (346)
T 4fih_A 80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 159 (346)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHH
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHH
Confidence 469999999999999 5679999999997665555677899999999999999999999999999999999999999999
Q ss_pred HHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 420 SLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 420 ~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
++++..+ ..+ ....+.+.|++.|++++|
T Consensus 160 ~~l~~~~-l~e---~~~~~~~~qi~~aL~ylH 187 (346)
T 4fih_A 160 DIVTHTR-MNE---EQIAAVCLAVLQALSVLH 187 (346)
T ss_dssp HHHHHSC-CCH---HHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCC-CCH---HHHHHHHHHHHHHHHHHH
Confidence 9998753 222 233334456666666643
No 71
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.72 E-value=1.6e-17 Score=155.96 Aligned_cols=146 Identities=23% Similarity=0.294 Sum_probs=120.4
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEe
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVL 128 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 128 (457)
.+|++|++++|+++ .++ .+..+++|+.|+|++|+|++.++ +.++++|+.|+|++|++++ +|. +.. ++|+.|+|
T Consensus 41 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L 113 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQ-SLA--GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFL 113 (263)
T ss_dssp TTCSEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCCSC-CTT-CCC-SSCCEEEC
T ss_pred CcCcEEECcCCCcc-cch--HHhhCCCCCEEECCCCccCCChh-hccCCCCCEEECCCCccCC-cCc-ccc-CcccEEEc
Confidence 47889999999998 776 68889999999999999998776 8889999999999999985 443 333 89999999
Q ss_pred eccccCCCCcccccCCCccceeecccccccCCCCCCCCCCCcEEEeecCcceecCCCchhhhccCccccccCcCcC
Q 012745 129 ANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPFNQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNINLC 204 (457)
Q Consensus 129 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~~c 204 (457)
++|+|++. + .+..+++|+.|+|++|+|++..+-..+++|+.|++++|+|++. +....+.++..+.+.+|+..+
T Consensus 114 ~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 114 DNNELRDT-D-SLIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp CSSCCSBS-G-GGTTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEEC
T ss_pred cCCccCCC-h-hhcCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccC
Confidence 99999853 3 5889999999999999998764333788999999999999887 556677788888888887554
No 72
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.72 E-value=2e-17 Score=160.46 Aligned_cols=111 Identities=24% Similarity=0.379 Sum_probs=82.2
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNG 416 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~G 416 (457)
.+.||+|+||.||+|. ..+|+.||||++..... ...+.|.+|+.+|++++|||||++++++.+++..|||||||++|
T Consensus 29 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg 108 (350)
T 4b9d_A 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGG 108 (350)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence 3679999999999999 57799999999976542 33567999999999999999999999999999999999999999
Q ss_pred chHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 417 SLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 417 sL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
+|.++|+.++... .......+.+.||+.++.++|
T Consensus 109 ~L~~~i~~~~~~~-~~e~~~~~~~~qi~~aL~ylH 142 (350)
T 4b9d_A 109 DLFKRINAQKGVL-FQEDQILDWFVQICLALKHVH 142 (350)
T ss_dssp BHHHHHHHTTTCC-CCHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHcCCCC-CCHHHHHHHHHHHHHHHHHHH
Confidence 9999998654211 111223334457777776654
No 73
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.72 E-value=1.7e-18 Score=166.77 Aligned_cols=128 Identities=20% Similarity=0.282 Sum_probs=68.8
Q ss_pred EeEEEeCCCCCc-cccChhhhc-------CCCCCCEEEeecCcccccCC-CC--cCCCCCcEEEccCCccccCCCccCCC
Q 012745 51 VTKLVLEHLNLT-GTLDEKVIN-------QLDQLRVLSFKGNSISGQIP-NL--LGLVNLKSLYLNDNNFSGKFPGSLSS 119 (457)
Q Consensus 51 l~~L~L~~n~l~-~~l~~~~~~-------~l~~L~~L~L~~N~l~~~~~-~~--~~l~~L~~L~Ls~N~l~~~~p~~~~~ 119 (457)
++.|+|++|.+. +.+|. .+. ++++|++|+|++|+|++..| .+ ..+++|++|+|++|++++. |..|..
T Consensus 65 L~~L~L~~n~l~~~~~~~-~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~ 142 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPS-RILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAE 142 (312)
T ss_dssp HHHCCCCEEEEEEEECBH-HHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHH
T ss_pred HhhcccccccccCCCcCH-HHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHH
Confidence 555566666553 23433 222 45566666666666655444 33 4556666666666666544 554544
Q ss_pred C-----CCCCEEEeeccccCCCCcccccCCCccceeecccccccCCC---CC---CCCCCCcEEEeecCcce
Q 012745 120 L-----HRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPI---PP---FNQTNLRFFNVSNNDLS 180 (457)
Q Consensus 120 l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~---~~---~~~~~L~~L~l~~N~l~ 180 (457)
+ ++|++|+|++|+|++..|..|..+++|++|+|++|++.+.. +. ..+++|+.|+|++|+|+
T Consensus 143 l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 214 (312)
T 1wwl_A 143 LQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGME 214 (312)
T ss_dssp HHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCC
T ss_pred HHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCc
Confidence 4 55666666666665555555666666666666666554321 11 24455555666665555
No 74
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.72 E-value=2.8e-18 Score=175.44 Aligned_cols=150 Identities=17% Similarity=0.098 Sum_probs=126.9
Q ss_pred cEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCC-CCCCCCEEE
Q 012745 50 RVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLS-SLHRLKIIV 127 (457)
Q Consensus 50 ~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~ 127 (457)
+|+.|+|++|.|+ .+++ ..+++|+.|+|++|.|++.++ .|.++++|+.|+|++|+|++..|..|. .+++|+.|+
T Consensus 100 ~L~~L~L~~N~l~-~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~ 175 (487)
T 3oja_A 100 SIETLHAANNNIS-RVSC---SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (487)
T ss_dssp TCCEEECCSSCCC-CEEE---CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CcCEEECcCCcCC-CCCc---cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEe
Confidence 4555555555555 3332 356889999999999999888 889999999999999999998888886 799999999
Q ss_pred eeccccCCCCcccccCCCccceeecccccccCCCCCC-CCCCCcEEEeecCcceecCCCchhhhccCccccccCcCcCC
Q 012745 128 LANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF-NQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNINLCG 205 (457)
Q Consensus 128 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~~c~ 205 (457)
|++|.|++. | .+..+++|++|+|++|.|++.++.. .+++|+.|+|++|.|++.++....+.++..+.+.+|+..|+
T Consensus 176 Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 176 LQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp CTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHH
T ss_pred cCCCccccc-c-ccccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCc
Confidence 999999965 3 3456999999999999999887776 78999999999999999877777778889999999998875
No 75
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.71 E-value=2.1e-17 Score=156.71 Aligned_cols=109 Identities=20% Similarity=0.351 Sum_probs=84.6
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeec----CCceEEEEEe
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQA----KEERLLVYDY 412 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lv~ey 412 (457)
.+.||+|+||.||+|. ..++..||||.+..... ...+.|.+|+++|++++|||||+++++|.. .+..||||||
T Consensus 31 ~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy 110 (290)
T 3fpq_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred eeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeC
Confidence 3579999999999999 56799999999975432 335679999999999999999999999865 3457999999
Q ss_pred cCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 413 FPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 413 ~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
|++|+|.++|++...... ....+.+.||+.|++++|
T Consensus 111 ~~gg~L~~~l~~~~~l~~---~~~~~~~~qi~~aL~ylH 146 (290)
T 3fpq_A 111 MTSGTLKTYLKRFKVMKI---KVLRSWCRQILKGLQFLH 146 (290)
T ss_dssp CCSCBHHHHHHHHSSCCH---HHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHhcCCCCH---HHHHHHHHHHHHHHHHHH
Confidence 999999999987542222 222234456777766654
No 76
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.71 E-value=5.3e-18 Score=163.76 Aligned_cols=151 Identities=19% Similarity=0.101 Sum_probs=100.1
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC--C---------------CcCCCCCcEEEccCCcccc
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP--N---------------LLGLVNLKSLYLNDNNFSG 111 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~--~---------------~~~l~~L~~L~Ls~N~l~~ 111 (457)
++|++|+|++|.+++ +++ +..+++|++|+|++|.|++.++ . ...+++|++|+|++|++++
T Consensus 58 ~~L~~L~Ls~n~l~~-~~~--~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~N~l~~ 134 (317)
T 3o53_A 58 TKLELLNLSSNVLYE-TLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITM 134 (317)
T ss_dssp TTCCEEECTTSCCEE-EEE--ETTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCSEEEECCCSSCEEEECCSSCCCS
T ss_pred CcCCEEECCCCcCCc-chh--hhhcCCCCEEECcCCccccccCCCCcCEEECCCCccCCcCccccCCCCEEECCCCCCCC
Confidence 467777777777763 322 6667777777777776665432 0 1124456666666666665
Q ss_pred CCCccCCCCCCCCEEEeeccccCCCCcccc-cCCCccceeecccccccCCCCCCCCCCCcEEEeecCcceecCCCchhhh
Q 012745 112 KFPGSLSSLHRLKIIVLANNQISGPIPESL-SNLKRLYMLYLQDNKFTGPIPPFNQTNLRFFNVSNNDLSGQIPVTPALV 190 (457)
Q Consensus 112 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~l~ 190 (457)
..+..|..+++|++|+|++|.+++..+..+ ..+++|++|+|++|.|++......+++|+.|+|++|+|++.++.+..+.
T Consensus 135 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~ 214 (317)
T 3o53_A 135 LRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFMGPEFQSAA 214 (317)
T ss_dssp GGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCEECGGGGGGT
T ss_pred ccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccccccccccCCEEECCCCcCCcchhhhcccC
Confidence 556666777777777777777776555555 3677777777777777766444467778888888888887777666667
Q ss_pred ccCccccccCcC
Q 012745 191 RFNASSFLLNIN 202 (457)
Q Consensus 191 ~l~~~~~~~n~~ 202 (457)
++..+.+.+|..
T Consensus 215 ~L~~L~L~~N~l 226 (317)
T 3o53_A 215 GVTWISLRNNKL 226 (317)
T ss_dssp TCSEEECTTSCC
T ss_pred cccEEECcCCcc
Confidence 777777777753
No 77
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.71 E-value=4.2e-17 Score=173.71 Aligned_cols=154 Identities=23% Similarity=0.268 Sum_probs=118.5
Q ss_pred EeEEEeCCCCCc--cccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCC--------ccCCC
Q 012745 51 VTKLVLEHLNLT--GTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFP--------GSLSS 119 (457)
Q Consensus 51 l~~L~L~~n~l~--~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~ 119 (457)
++.|++++|.+. +.+|. .|..+++|+.|+|++|+|++.++ .|.++++|++|+|++|++++..+ ..|.+
T Consensus 456 L~~L~l~~n~l~~~~~~p~-~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~ 534 (680)
T 1ziw_A 456 LQRLMLRRVALKNVDSSPS-PFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKG 534 (680)
T ss_dssp CCEEECTTSCCBCTTCSSC-TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTT
T ss_pred cccchhccccccccccCCc-ccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcC
Confidence 444444444443 23333 67788888888888888887777 67888888888888888885422 23788
Q ss_pred CCCCCEEEeeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCCCc-h-hhhccCcc
Q 012745 120 LHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPVT-P-ALVRFNAS 195 (457)
Q Consensus 120 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~-~-~l~~l~~~ 195 (457)
+++|+.|+|++|+|+...+..|..+++|+.|+|++|+|++.++.. .+++|+.|+|++|+|++.+|.. . .+.++..+
T Consensus 535 l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l 614 (680)
T 1ziw_A 535 LSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTEL 614 (680)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEE
T ss_pred CCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEE
Confidence 889999999999998655567899999999999999999776664 7789999999999999877732 1 56788899
Q ss_pred ccccCcCcCC
Q 012745 196 SFLLNINLCG 205 (457)
Q Consensus 196 ~~~~n~~~c~ 205 (457)
.+.+||+.|.
T Consensus 615 ~l~~N~~~c~ 624 (680)
T 1ziw_A 615 DMRFNPFDCT 624 (680)
T ss_dssp ECTTCCCCBC
T ss_pred EccCCCcccC
Confidence 9999999984
No 78
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.71 E-value=3.1e-17 Score=178.95 Aligned_cols=146 Identities=21% Similarity=0.238 Sum_probs=123.2
Q ss_pred CcccccceecCCCcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccC-C-CCcCCCCCcEEEccCCccccCCC
Q 012745 37 VCKWQGIKECLNGRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQI-P-NLLGLVNLKSLYLNDNNFSGKFP 114 (457)
Q Consensus 37 ~c~~~gv~~c~~~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~-~-~~~~l~~L~~L~Ls~N~l~~~~p 114 (457)
.|.|..|. +..+++++|||++|.|+ .+++..|.++++|++|+|++|.+.+.+ + .|.++++|++|+|++|+|++..|
T Consensus 13 ~~~L~~vP-~lp~~l~~LdLs~N~i~-~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p 90 (844)
T 3j0a_A 13 FCNLTQVP-QVLNTTERLLLSFNYIR-TVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP 90 (844)
T ss_dssp CCCSSCCC-SSCTTCCEEEEESCCCC-EECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT
T ss_pred CCCCCCCC-CCCCCcCEEECCCCcCC-ccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH
Confidence 45677777 55588999999999999 565668999999999999999554443 5 78999999999999999998889
Q ss_pred ccCCCCCCCCEEEeeccccCCCCccc--ccCCCccceeecccccccCCCCC--C-CCCCCcEEEeecCcceecCC
Q 012745 115 GSLSSLHRLKIIVLANNQISGPIPES--LSNLKRLYMLYLQDNKFTGPIPP--F-NQTNLRFFNVSNNDLSGQIP 184 (457)
Q Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~~~--~-~~~~L~~L~l~~N~l~~~~p 184 (457)
..|.++++|++|+|++|.+++.+|.. |.++++|++|+|++|.+++..+. + .+++|+.|+|++|.+++..|
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~ 165 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCE 165 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCS
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCH
Confidence 99999999999999999998766665 89999999999999999877653 2 78999999999999987766
No 79
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.71 E-value=3e-17 Score=161.43 Aligned_cols=147 Identities=18% Similarity=0.138 Sum_probs=127.8
Q ss_pred eEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCc-CCCCCcEEEccCCccccCCCccCCCCCCCCEEEee
Q 012745 52 TKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLL-GLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLA 129 (457)
Q Consensus 52 ~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 129 (457)
+.+++++++|+ .+|.. + ...|+.|+|++|+|++.++ .|. ++++|+.|+|++|+|++..+..|..+++|++|+|+
T Consensus 21 ~~l~c~~~~l~-~iP~~-~--~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQS-L--PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TEEECCSSCCS-SCCSS-C--CTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEEEeCCCCcC-ccCcc-C--CCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 57999999999 89863 3 3568999999999999888 566 99999999999999998888899999999999999
Q ss_pred ccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCCCc----hhhhccCccccccCcC
Q 012745 130 NNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPVT----PALVRFNASSFLLNIN 202 (457)
Q Consensus 130 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~----~~l~~l~~~~~~~n~~ 202 (457)
+|+|++..+..|..+++|++|+|++|+|++..+.. .+++|+.|+|++|+|++.++.. ..+.+|..+.+.+|..
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l 175 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKL 175 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCC
Confidence 99999888888999999999999999999876655 8899999999999999876532 3467778888888864
No 80
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.71 E-value=1.6e-17 Score=173.13 Aligned_cols=155 Identities=21% Similarity=0.280 Sum_probs=98.3
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC--CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP--NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKII 126 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 126 (457)
++|++|+|++|.+. .+++. +..+++|+.|+|++|.+++.++ .+.++++|++|+|++|.+++..|..|..+++|+.|
T Consensus 373 ~~L~~L~l~~n~l~-~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 450 (570)
T 2z63_A 373 TSLKYLDLSFNGVI-TMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 450 (570)
T ss_dssp SCCCEEECCSCSEE-EEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred CccCEEECCCCccc-ccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEE
Confidence 34555555555555 34432 5566666666666666665544 45666677777777777766666666777777777
Q ss_pred EeeccccC-CCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCCC-chhhhccCccccccCcC
Q 012745 127 VLANNQIS-GPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPV-TPALVRFNASSFLLNIN 202 (457)
Q Consensus 127 ~Ls~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~-~~~l~~l~~~~~~~n~~ 202 (457)
+|++|.++ +.+|..|..+++|++|+|++|++++..|.. .+++|+.|++++|++++.+|. +..+.++..+.+.+|+.
T Consensus 451 ~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~ 530 (570)
T 2z63_A 451 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPW 530 (570)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred ECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcc
Confidence 77777765 456666777777777777777777665543 566777777777777766653 34455666667777776
Q ss_pred cCC
Q 012745 203 LCG 205 (457)
Q Consensus 203 ~c~ 205 (457)
.|.
T Consensus 531 ~~~ 533 (570)
T 2z63_A 531 DCS 533 (570)
T ss_dssp CCC
T ss_pred cCC
Confidence 653
No 81
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.71 E-value=2.8e-17 Score=163.29 Aligned_cols=152 Identities=18% Similarity=0.151 Sum_probs=81.8
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
++|++|+|++|.++ .+++..|..+++|+.|+|++|.|+..++ .|.++++|++|+|++|++++..|..|..+++|++|+
T Consensus 93 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 171 (390)
T 3o6n_A 93 HTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQ 171 (390)
T ss_dssp TTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEE
T ss_pred CCcCEEECCCCCCC-cCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEE
Confidence 34555555555555 3444445555555555555555554444 234555555555555555544444455555555555
Q ss_pred eeccccCCCCc-----------------------------------------------------------ccccCCCccc
Q 012745 128 LANNQISGPIP-----------------------------------------------------------ESLSNLKRLY 148 (457)
Q Consensus 128 Ls~N~l~~~~p-----------------------------------------------------------~~~~~l~~L~ 148 (457)
|++|++++... ..+..+++|+
T Consensus 172 l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~~~l~~l~~L~ 251 (390)
T 3o6n_A 172 LSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGLV 251 (390)
T ss_dssp CCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCCGGGGGCTTCS
T ss_pred CCCCcCCccccccccccceeecccccccccCCCCcceEEECCCCeeeeccccccccccEEECCCCCCcccHHHcCCCCcc
Confidence 55554442211 1244556666
Q ss_pred eeecccccccCCCCCC--CCCCCcEEEeecCcceecCCCchhhhccCccccccCc
Q 012745 149 MLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNI 201 (457)
Q Consensus 149 ~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~ 201 (457)
+|+|++|.+++..+.. .+++|+.|+|++|++++..+....++++..+.+.+|.
T Consensus 252 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~n~ 306 (390)
T 3o6n_A 252 EVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNH 306 (390)
T ss_dssp EEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSSSCCTTCCEEECCSSC
T ss_pred EEECCCCcCCCcChhHccccccCCEEECCCCcCcccCcccCCCCCCCEEECCCCc
Confidence 6666666666554443 5666666666666666654444445556666666554
No 82
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.71 E-value=1.8e-17 Score=171.00 Aligned_cols=154 Identities=20% Similarity=0.156 Sum_probs=119.2
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccC--C-CCcCCCCCcEEEccCCccccCCCc-cCCCCCCCC
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQI--P-NLLGLVNLKSLYLNDNNFSGKFPG-SLSSLHRLK 124 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~--~-~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~ 124 (457)
++|++|+|++|++++.+|. .+..+++|+.|+|++|+|++.. + .+..+++|++|+|++|++++.+|. .|..+++|+
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFE-NCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCEEECCSSCCCTTTTT-TCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CcccEEEeECCccChhhhh-hhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 5788888888888865654 7888888888888888888632 3 577888888888888888874554 477888888
Q ss_pred EEEeeccccCCCCcccccCCCccceeecccccccCCCCCC-CCCCCcEEEeecCcceecCCC-chhhhccCccccccCcC
Q 012745 125 IIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF-NQTNLRFFNVSNNDLSGQIPV-TPALVRFNASSFLLNIN 202 (457)
Q Consensus 125 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~~~~p~-~~~l~~l~~~~~~~n~~ 202 (457)
.|+|++|++++..|..+. ++|+.|+|++|+|+..++.. .+++|+.|++++|+|+..++. +..+.++..+.+.+|+.
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~ 480 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPW 480 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCB
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCcccccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCC
Confidence 888888888777666554 68888888888888544333 788888999999988865553 45667778888888888
Q ss_pred cCC
Q 012745 203 LCG 205 (457)
Q Consensus 203 ~c~ 205 (457)
.|.
T Consensus 481 ~c~ 483 (520)
T 2z7x_B 481 DCS 483 (520)
T ss_dssp CCC
T ss_pred ccc
Confidence 774
No 83
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.70 E-value=3.2e-18 Score=146.20 Aligned_cols=126 Identities=26% Similarity=0.318 Sum_probs=101.0
Q ss_pred CcEeEEEeCCCCCc-cccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 49 GRVTKLVLEHLNLT-GTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 49 ~~l~~L~L~~n~l~-~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
++++.|++++|+++ +.+|. .+..+++|+.|+|++|.|++. +.+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~-~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEG-LTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCS-CCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHH-HHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 57888888888887 67775 778888888888888888876 6778888888888888888876777777788888888
Q ss_pred eeccccCCC-CcccccCCCccceeecccccccCCCC---C-C-CCCCCcEEEeec
Q 012745 128 LANNQISGP-IPESLSNLKRLYMLYLQDNKFTGPIP---P-F-NQTNLRFFNVSN 176 (457)
Q Consensus 128 Ls~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~~---~-~-~~~~L~~L~l~~ 176 (457)
|++|++++. .+..+..+++|++|++++|++++.++ . . .+++|+.|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 888888853 34778888888888888888887665 1 2 677888887753
No 84
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.70 E-value=3e-17 Score=156.45 Aligned_cols=146 Identities=29% Similarity=0.363 Sum_probs=120.1
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEe
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVL 128 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 128 (457)
++|++|+|++|+++ .+++ +..+++|+.|+|++|.|++. +.+..+++|++|+|++|++++. +.+..+++|+.|+|
T Consensus 68 ~~L~~L~L~~n~l~-~~~~--l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 68 PNVTKLFLNGNKLT-DIKP--LANLKNLGWLFLDENKVKDL-SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYL 141 (291)
T ss_dssp TTCCEEECCSSCCC-CCGG--GTTCTTCCEEECCSSCCCCG-GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEEC
T ss_pred CCCCEEEccCCccC-CCcc--cccCCCCCEEECCCCcCCCC-hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEc
Confidence 57899999999998 5654 88899999999999998864 4588889999999999999854 46888999999999
Q ss_pred eccccCCCCcccccCCCccceeecccccccCCCCCCCCCCCcEEEeecCcceecCCCchhhhccCccccccCcCc
Q 012745 129 ANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPFNQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNINL 203 (457)
Q Consensus 129 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~~ 203 (457)
++|++++. ..+..+++|+.|+|++|+|++..+...+++|+.|++++|.|++. |....+.++..+.+.+|+..
T Consensus 142 ~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~L~~N~i~~l-~~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEEEEEEEEE
T ss_pred cCCcCCcc--hhhccCCCCCEEEccCCccccchhhcCCCccCEEECCCCcCCCC-hhhccCCCCCEEECcCCccc
Confidence 99999864 57888999999999999998877644888999999999999875 44566777788888888643
No 85
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.70 E-value=1.3e-17 Score=163.44 Aligned_cols=114 Identities=21% Similarity=0.218 Sum_probs=76.8
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCC-ccCCCCCCCCEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFP-GSLSSLHRLKII 126 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L 126 (457)
++|++|+|++|+++ .+++..|.++++|++|+|++|+|++.++ .|.++++|++|+|++|++++..+ ..|..+++|++|
T Consensus 76 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L 154 (353)
T 2z80_A 76 VNLQALVLTSNGIN-TIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQIL 154 (353)
T ss_dssp TTCCEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCCCEEECCCCccC-ccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEE
Confidence 56777777777777 5555567777777777777777776555 36677777777777777774333 366777777777
Q ss_pred Eeecc-ccCCCCcccccCCCccceeecccccccCCCCC
Q 012745 127 VLANN-QISGPIPESLSNLKRLYMLYLQDNKFTGPIPP 163 (457)
Q Consensus 127 ~Ls~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~ 163 (457)
++++| .+.+..|..|..+++|++|++++|.+++..+.
T Consensus 155 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 192 (353)
T 2z80_A 155 RVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPK 192 (353)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTT
T ss_pred ECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHH
Confidence 77777 35555556666777777777777776655443
No 86
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.70 E-value=3.2e-17 Score=147.00 Aligned_cols=128 Identities=20% Similarity=0.269 Sum_probs=111.7
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
++|++|++++|.++ .++ .+..+++|+.|+|++|.+++..+ .+..+++|++|+|++|++++..|..|..+++|+.|+
T Consensus 66 ~~L~~L~l~~n~~~-~~~--~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 66 HNIKDLTINNIHAT-NYN--PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp TTCSEEEEESCCCS-CCG--GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCEEEccCCCCC-cch--hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 58999999999887 553 78999999999999999998555 899999999999999999988888999999999999
Q ss_pred eeccc-cCCCCcccccCCCccceeecccccccCCCCCCCCCCCcEEEeecCccee
Q 012745 128 LANNQ-ISGPIPESLSNLKRLYMLYLQDNKFTGPIPPFNQTNLRFFNVSNNDLSG 181 (457)
Q Consensus 128 Ls~N~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~ 181 (457)
|++|+ ++ .+| .+..+++|++|++++|++++..+-..+++|+.|++++|+|.+
T Consensus 143 L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 143 LSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC----
T ss_pred ccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCcccCC
Confidence 99998 66 555 699999999999999999986543489999999999999875
No 87
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.70 E-value=2.6e-17 Score=163.38 Aligned_cols=107 Identities=19% Similarity=0.314 Sum_probs=88.3
Q ss_pred cccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCchH
Q 012745 341 ETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLF 419 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL~ 419 (457)
+.||+|+||.||+|. ..+|+.||||++........+.+.+|+.+|++++|||||+++++|.+.+..|||||||++|+|.
T Consensus 157 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~ 236 (423)
T 4fie_A 157 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 236 (423)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHH
T ss_pred eEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHH
Confidence 579999999999999 5679999999998766556677999999999999999999999999999999999999999999
Q ss_pred HHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 420 SLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 420 ~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
++++..+ ..+.. ..+.+.|++.|++++|
T Consensus 237 ~~i~~~~-l~e~~---~~~~~~qil~aL~ylH 264 (423)
T 4fie_A 237 DIVTHTR-MNEEQ---IAAVCLAVLQALSVLH 264 (423)
T ss_dssp HHHHHSC-CCHHH---HHHHHHHHHHHHHHHH
T ss_pred HHHhccC-CCHHH---HHHHHHHHHHHHHHHH
Confidence 9998654 23223 3334456666666643
No 88
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.70 E-value=4.5e-17 Score=170.88 Aligned_cols=153 Identities=20% Similarity=0.176 Sum_probs=114.7
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
++|+.|+|++|.|+ .+++..|..+++|+.|+|++|.|++.++ .|.++++|++|+|++|.|++..+..|..+++|++|+
T Consensus 75 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 75 RQVELLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCSEEECTTSCCC-EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCC-CCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 57888888888888 5666678888888888888888888777 677888888888888888866666678888888888
Q ss_pred eeccccCCCCcccccCCCccceeecccccccCCCCC--------------------------------------------
Q 012745 128 LANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPP-------------------------------------------- 163 (457)
Q Consensus 128 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-------------------------------------------- 163 (457)
|++|.|++..|..|..+++|++|+|++|.|++....
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~ 233 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVE 233 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSC
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCC
Confidence 888888877777788888888888888877643210
Q ss_pred ----------------C-CCCCCcEEEeecCcceecCC-CchhhhccCccccccCcC
Q 012745 164 ----------------F-NQTNLRFFNVSNNDLSGQIP-VTPALVRFNASSFLLNIN 202 (457)
Q Consensus 164 ----------------~-~~~~L~~L~l~~N~l~~~~p-~~~~l~~l~~~~~~~n~~ 202 (457)
. .+++|+.|+|++|.+++.+| .+..+.+|..+.+.+|..
T Consensus 234 L~~L~L~~n~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 290 (597)
T 3oja_B 234 LTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRL 290 (597)
T ss_dssp CCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCC
T ss_pred CCEEECCCCCCCCChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCC
Confidence 1 35678888888888888766 233455666667766653
No 89
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.70 E-value=5.1e-17 Score=156.19 Aligned_cols=145 Identities=23% Similarity=0.348 Sum_probs=118.9
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEe
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVL 128 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 128 (457)
++|++|+|++|.++ .+++ +..+++|+.|+|++|.|++. +.+..+++|++|+|++|++++. + .+..+++|+.|+|
T Consensus 63 ~~L~~L~L~~n~i~-~~~~--~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQIT-DLAP--LKNLTKITELELSGNPLKNV-SAIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCC-CCGG--GTTCCSCCEEECCSCCCSCC-GGGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCC-CChh--HccCCCCCEEEccCCcCCCc-hhhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEEC
Confidence 57899999999998 6754 88899999999999998864 4688899999999999999854 4 3888999999999
Q ss_pred eccccCCCCcccccCCCccceeecccccccCCCCCCCCCCCcEEEeecCcceecCCCchhhhccCccccccCcC
Q 012745 129 ANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPFNQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNIN 202 (457)
Q Consensus 129 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~ 202 (457)
++|++++..+ +..+++|++|+|++|++++..+...+++|+.|++++|++++..+ ...+.++..+.+.+|..
T Consensus 137 ~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~l 207 (308)
T 1h6u_A 137 DLNQITNISP--LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQI 207 (308)
T ss_dssp CSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSCC
T ss_pred CCCccCcCcc--ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCcc
Confidence 9999986533 88889999999999999876664478889999999999987655 56677778888887764
No 90
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.70 E-value=2.3e-17 Score=158.55 Aligned_cols=148 Identities=26% Similarity=0.341 Sum_probs=129.6
Q ss_pred CCcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 48 NGRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 48 ~~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
.++|++|+|++|.++ .++ .+..+++|+.|+|++|+|++.+ .+..+++|++|+|++|++++..+ +..+++|+.|+
T Consensus 84 l~~L~~L~L~~n~l~-~~~--~~~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~ 157 (308)
T 1h6u_A 84 LTKITELELSGNPLK-NVS--AIAGLQSIKTLDLTSTQITDVT-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLS 157 (308)
T ss_dssp CCSCCEEECCSCCCS-CCG--GGTTCTTCCEEECTTSCCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEE
T ss_pred CCCCCEEEccCCcCC-Cch--hhcCCCCCCEEECCCCCCCCch-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEE
Confidence 368999999999999 664 6999999999999999999765 48899999999999999996543 89999999999
Q ss_pred eeccccCCCCcccccCCCccceeecccccccCCCCCCCCCCCcEEEeecCcceecCCCchhhhccCccccccCcCcC
Q 012745 128 LANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPFNQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNINLC 204 (457)
Q Consensus 128 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~~c 204 (457)
|++|++++. +. +..+++|+.|+|++|++++..+...+++|+.|+|++|++++..| ...+.++..+.+.+|+..+
T Consensus 158 l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 158 IGNAQVSDL-TP-LANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCCBCGG-GTTCTTCCEEEEEEEEEEC
T ss_pred ccCCcCCCC-hh-hcCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccCcccc-ccCCCCCCEEEccCCeeec
Confidence 999999964 43 99999999999999999987764588999999999999998775 5677888888999998543
No 91
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.70 E-value=3e-17 Score=156.62 Aligned_cols=110 Identities=21% Similarity=0.291 Sum_probs=88.9
Q ss_pred HhcccccCCccEEEEEE-ecCCcEEEEEEccccC---cccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecC
Q 012745 339 SAETLGRGTIGSTYKAV-LESGFIVTVKRLKDAR---YPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFP 414 (457)
Q Consensus 339 ~~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 414 (457)
..+.||+|+||.||+|. ..+|+.||||++.+.. ....+.+.+|+++|++++|||||++++++.+++..|+|||||+
T Consensus 36 i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~ 115 (311)
T 4aw0_A 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAK 115 (311)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCC
Confidence 35789999999999999 6779999999997542 2345679999999999999999999999999999999999999
Q ss_pred CCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 415 NGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 415 ~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
+|||.++|++.....+....... .|++.++.++|
T Consensus 116 gG~L~~~i~~~~~l~e~~~~~~~---~qi~~al~ylH 149 (311)
T 4aw0_A 116 NGELLKYIRKIGSFDETCTRFYT---AEIVSALEYLH 149 (311)
T ss_dssp TEEHHHHHHHHSSCCHHHHHHHH---HHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCCCHHHHHHHH---HHHHHHHHHHH
Confidence 99999999876544443343444 46666655543
No 92
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.69 E-value=3.9e-17 Score=171.97 Aligned_cols=157 Identities=19% Similarity=0.223 Sum_probs=128.7
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccc-cCCCccCCCCCCCCEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFS-GKFPGSLSSLHRLKII 126 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L 126 (457)
.+++.+++++|++....+...|..+.+|+.+++++|.+++..+ .+..+++|+.|+|++|++. +..|..|..+++|++|
T Consensus 420 ~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L 499 (635)
T 4g8a_A 420 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 499 (635)
T ss_dssp TTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred ccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEE
Confidence 5677777777777755565678888899999999999988877 7788899999999998754 4578889999999999
Q ss_pred EeeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCCCc-hhh-hccCccccccCcC
Q 012745 127 VLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPVT-PAL-VRFNASSFLLNIN 202 (457)
Q Consensus 127 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~-~~l-~~l~~~~~~~n~~ 202 (457)
+|++|+|++..|..|..+++|++|+|++|+|++.++.. .+++|+.|+|++|+|++.+|.. ..+ .++..+.+.+||+
T Consensus 500 ~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~ 579 (635)
T 4g8a_A 500 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 579 (635)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCB
T ss_pred ECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCC
Confidence 99999999888888999999999999999998877654 7889999999999999888732 223 4677788899999
Q ss_pred cCC
Q 012745 203 LCG 205 (457)
Q Consensus 203 ~c~ 205 (457)
.|.
T Consensus 580 ~C~ 582 (635)
T 4g8a_A 580 ACT 582 (635)
T ss_dssp CCS
T ss_pred ccc
Confidence 884
No 93
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.69 E-value=7.9e-17 Score=167.78 Aligned_cols=152 Identities=22% Similarity=0.237 Sum_probs=124.1
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
++++.|+|++|+++ .+++..|.++++|+.|+|++|+|++.++ .|.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 28 ~~l~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 28 FSTKNLDLSFNPLR-HLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp SSCCEEECCSCCCC-EECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred ccccEEEccCCccC-ccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 57899999999998 6766789999999999999999998877 788899999999999999988888899999999999
Q ss_pred eeccccCCCCcccccCCCccceeecccccccCC-CCCC--CCCCCcEEEeecCcceecCCC-chhhhcc----Ccccccc
Q 012745 128 LANNQISGPIPESLSNLKRLYMLYLQDNKFTGP-IPPF--NQTNLRFFNVSNNDLSGQIPV-TPALVRF----NASSFLL 199 (457)
Q Consensus 128 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~~~~--~~~~L~~L~l~~N~l~~~~p~-~~~l~~l----~~~~~~~ 199 (457)
|++|++++..+..|+.+++|++|+|++|.+++. +|.. .+++|+.|++++|++++..|. +..+.++ ..+.+.+
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~ 186 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCC
Confidence 999999876666789999999999999998863 3443 788999999999999887662 2334444 3445555
Q ss_pred Cc
Q 012745 200 NI 201 (457)
Q Consensus 200 n~ 201 (457)
|.
T Consensus 187 n~ 188 (570)
T 2z63_A 187 NP 188 (570)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 94
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.69 E-value=6.8e-18 Score=180.54 Aligned_cols=174 Identities=20% Similarity=0.284 Sum_probs=113.0
Q ss_pred hhhHHHHHHhHhcCC--CCCCCCCCCCCCCCCcccccceecCCCcEeEE------------------EeCCCCCcc----
Q 012745 8 SGDTEALLSLKSSLD--PFNRLSSWKNGDRDVCKWQGIKECLNGRVTKL------------------VLEHLNLTG---- 63 (457)
Q Consensus 8 ~~~~~~l~~~~~~~~--~~~~l~~w~~~~~~~c~~~gv~~c~~~~l~~L------------------~L~~n~l~~---- 63 (457)
+.+..+|+.+..++. ....-..|.......+.|.++. +..++++.| +|++|.|.+
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~~ 209 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSA-VSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDDI 209 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCce-ecCCccceEEeeCCCCCcchhhHhhcCccCcccccCcccc
Confidence 356778888887772 1222345543333345565555 444444444 444444432
Q ss_pred ----ccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEeeccccCCCCcc
Q 012745 64 ----TLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPE 139 (457)
Q Consensus 64 ----~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 139 (457)
.+++..|..+..|+.|+|++|.|..+++.++++++|++|+|++|+|+ .+|..|.+|++|++|+|++|+|+ .+|.
T Consensus 210 ~n~~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~ 287 (727)
T 4b8c_D 210 ENRMVMPKDSKYDDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPA 287 (727)
T ss_dssp ------------CCCCCCEEECTTSCCSCCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCS
T ss_pred ccceecChhhhccCCCCcEEECCCCCCCCCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccCh
Confidence 13455788999999999999999966667889999999999999999 88999999999999999999999 7799
Q ss_pred cccCCCccceeecccccccCCCCCC-CCCCCcEEEeecCcceecCC
Q 012745 140 SLSNLKRLYMLYLQDNKFTGPIPPF-NQTNLRFFNVSNNDLSGQIP 184 (457)
Q Consensus 140 ~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~~~~p 184 (457)
.|+.|++|++|+|++|.|+.++..+ .+++|+.|+|++|.|++.+|
T Consensus 288 ~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p 333 (727)
T 4b8c_D 288 ELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFL 333 (727)
T ss_dssp SGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHHH
T ss_pred hhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCCCCh
Confidence 9999999999999999998655444 88999999999999998887
No 95
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.69 E-value=1e-16 Score=155.53 Aligned_cols=147 Identities=22% Similarity=0.229 Sum_probs=75.2
Q ss_pred EeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccc--cCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 51 VTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISG--QIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 51 l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~--~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
|++|++++|.++ .+++..|..+++|+.|+|++|.++. ..+ .+.++++|++|++++|+++ .+|..+. ++|+.|+
T Consensus 123 L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~ 198 (330)
T 1xku_A 123 LQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELH 198 (330)
T ss_dssp CCEEECCSSCCC-BBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEE
T ss_pred ccEEECCCCccc-ccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEE
Confidence 444444444444 3334445555555555555555532 222 4445555555555555555 2333322 4555555
Q ss_pred eeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCCCchhhhccCccccccCc
Q 012745 128 LANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNI 201 (457)
Q Consensus 128 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~ 201 (457)
|++|++++..|..|..+++|+.|+|++|.+++..+.. .+++|+.|+|++|+++..+.....+.++..+.+.+|.
T Consensus 199 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~ 274 (330)
T 1xku_A 199 LDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNN 274 (330)
T ss_dssp CTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECCSSC
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCChhhccCCCcCEEECCCCc
Confidence 5555555555555556666666666666665544432 4555666666666665443334444455555555554
No 96
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.69 E-value=1.2e-17 Score=161.34 Aligned_cols=151 Identities=17% Similarity=0.094 Sum_probs=122.5
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCC-CCCCCCEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLS-SLHRLKII 126 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L 126 (457)
++|++|++++|+++ .+++ ..+++|+.|+|++|+|++..+ .+..+++|++|+|++|++++..+..+. .+++|++|
T Consensus 99 ~~L~~L~l~~n~l~-~~~~---~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L 174 (317)
T 3o53_A 99 PSIETLHAANNNIS-RVSC---SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHL 174 (317)
T ss_dssp TTCCEEECCSSCCS-EEEE---CCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEE
T ss_pred CCcCEEECCCCccC-CcCc---cccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEE
Confidence 34555555555555 3332 346789999999999998887 888999999999999999987777764 78999999
Q ss_pred EeeccccCCCCcccccCCCccceeecccccccCCCCCC-CCCCCcEEEeecCcceecCCCchhhhccCccccccCcCcCC
Q 012745 127 VLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF-NQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNINLCG 205 (457)
Q Consensus 127 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~~c~ 205 (457)
+|++|.|++. | ....+++|++|+|++|+|++.++.. .+++|+.|+|++|+|+..++....+.++..+.+.+|+..|+
T Consensus 175 ~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 175 NLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp ECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCBHH
T ss_pred ECCCCcCccc-c-cccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCccCc
Confidence 9999999854 3 3445899999999999999876665 78999999999999998777666778888999999998864
No 97
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.69 E-value=7.3e-17 Score=154.04 Aligned_cols=112 Identities=21% Similarity=0.333 Sum_probs=84.7
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCC------------c
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKE------------E 405 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------------~ 405 (457)
.+.||+|+||.||+|. ..+|+.||||+++.... ...+.|.+|+.+|++++|||||+++++|...+ .
T Consensus 10 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~ 89 (299)
T 4g31_A 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVY 89 (299)
T ss_dssp EEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEE
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcE
Confidence 3689999999999999 56799999999976543 33567999999999999999999999987543 3
Q ss_pred eEEEEEecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 406 RLLVYDYFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 406 ~~lv~ey~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
.|+|||||++|+|.++++.+....+.......+.+.|++.|++++|
T Consensus 90 l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH 135 (299)
T 4g31_A 90 LYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH 135 (299)
T ss_dssp EEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999987643222222223344567777777654
No 98
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.69 E-value=5.9e-17 Score=155.21 Aligned_cols=107 Identities=21% Similarity=0.229 Sum_probs=82.0
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCC----ceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKE----ERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|++ +|+.||||+++... .....+..|+..+.+++|||||+++|+|..++ ..|||||||++
T Consensus 8 ~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~-~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~ 85 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEEECSSSEEEEEEE-TTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEeeCCCeEEEEEEE-CCEEEEEEEECccc-hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence 46899999999999997 48999999997543 11222345666667899999999999998654 57999999999
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcCc
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMSP 452 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~~ 452 (457)
|+|.++|+... .......+.+.+++.|++++|.
T Consensus 86 gsL~~~l~~~~----l~~~~~~~i~~~ia~gl~ylH~ 118 (303)
T 3hmm_A 86 GSLFDYLNRYT----VTVEGMIKLALSTASGLAHLHM 118 (303)
T ss_dssp CBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHC
T ss_pred CcHHHHHHhCC----CCHHHHHHHHHHHHHHHHHHHH
Confidence 99999998753 1122333466788888888764
No 99
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.69 E-value=1.1e-16 Score=166.03 Aligned_cols=155 Identities=21% Similarity=0.186 Sum_probs=107.1
Q ss_pred CcEeEEEeCCCCCccccCh--hhhcCCCCCCEEEeecCcccccCC---CCcCCCCCcEEEccCCccccCCCccCCCCCCC
Q 012745 49 GRVTKLVLEHLNLTGTLDE--KVINQLDQLRVLSFKGNSISGQIP---NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRL 123 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~--~~~~~l~~L~~L~L~~N~l~~~~~---~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 123 (457)
++|++|+|++|++++.+|+ ..+..+++|+.|+|++|+|++.++ .+..+++|++|+|++|+|+ .+|..+..+++|
T Consensus 334 ~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L 412 (549)
T 2z81_A 334 KSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKM 412 (549)
T ss_dssp TTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTC
T ss_pred ccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccc
Confidence 5788888888888865543 136677888888888888876543 4677888888888888887 567777777777
Q ss_pred CEEEeeccccCCCCcccc------------------cCCCccceeecccccccCCCCCCCCCCCcEEEeecCcceecCCC
Q 012745 124 KIIVLANNQISGPIPESL------------------SNLKRLYMLYLQDNKFTGPIPPFNQTNLRFFNVSNNDLSGQIPV 185 (457)
Q Consensus 124 ~~L~Ls~N~l~~~~p~~~------------------~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~ 185 (457)
++|+|++|+|+. +|..+ ..+++|++|+|++|+|+..+....+++|+.|+|++|++++.+|.
T Consensus 413 ~~L~Ls~N~l~~-l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~~ip~~~~l~~L~~L~Ls~N~l~~~~~~ 491 (549)
T 2z81_A 413 RFLNLSSTGIRV-VKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLKTLPDASLFPVLLVMKISRNQLKSVPDG 491 (549)
T ss_dssp CEEECTTSCCSC-CCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCCCGGGCTTCCEEECCSSCCCCCCTT
T ss_pred cEEECCCCCccc-ccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccCcCCCcccCccCCEEecCCCccCCcCHH
Confidence 777777777763 33222 25667777777777776433322667777777777777776663
Q ss_pred -chhhhccCccccccCcCcCC
Q 012745 186 -TPALVRFNASSFLLNINLCG 205 (457)
Q Consensus 186 -~~~l~~l~~~~~~~n~~~c~ 205 (457)
+..+.++..+.+.+|++.|.
T Consensus 492 ~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 492 IFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp GGGGCTTCCEEECCSSCBCCC
T ss_pred HHhcCcccCEEEecCCCccCC
Confidence 34556666777777777663
No 100
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.69 E-value=1.7e-16 Score=167.66 Aligned_cols=153 Identities=19% Similarity=0.179 Sum_probs=127.2
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCC-CcCCC-------CCcEEEccCCccccCCCccCC--
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPN-LLGLV-------NLKSLYLNDNNFSGKFPGSLS-- 118 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~-------~L~~L~Ls~N~l~~~~p~~~~-- 118 (457)
.+|+.|+|++|+++ .+|+..+..+++|+.|+|++|+|+.+++. +..+. +|+.|+|++|+|+ .+|..+.
T Consensus 433 ~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~ 510 (636)
T 4eco_A 433 INVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRAT 510 (636)
T ss_dssp CCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTT
T ss_pred CCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhc
Confidence 57999999999999 88887888899999999999999966653 33333 8999999999999 6788876
Q ss_pred CCCCCCEEEeeccccCCCCcccccCCCccceeec------ccccccCCCCCC--CCCCCcEEEeecCcceecCCCchhhh
Q 012745 119 SLHRLKIIVLANNQISGPIPESLSNLKRLYMLYL------QDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPVTPALV 190 (457)
Q Consensus 119 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l------~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~l~ 190 (457)
.+++|+.|+|++|+|++ +|..+..+++|+.|+| ++|++.+.+|.. .+++|+.|+|++|+| +.+|.. ...
T Consensus 511 ~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~-~~~ 587 (636)
T 4eco_A 511 TLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEK-ITP 587 (636)
T ss_dssp TCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCT
T ss_pred cCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHh-HhC
Confidence 89999999999999997 8888999999999999 567788777766 789999999999999 455532 337
Q ss_pred ccCccccccCcCcCCC
Q 012745 191 RFNASSFLLNINLCGE 206 (457)
Q Consensus 191 ~l~~~~~~~n~~~c~~ 206 (457)
++..+.+.+|+..|..
T Consensus 588 ~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 588 NISVLDIKDNPNISID 603 (636)
T ss_dssp TCCEEECCSCTTCEEE
T ss_pred cCCEEECcCCCCcccc
Confidence 8888899999877643
No 101
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.68 E-value=1.4e-16 Score=154.71 Aligned_cols=150 Identities=23% Similarity=0.244 Sum_probs=97.8
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccc--cCCCccCCCC-----
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFS--GKFPGSLSSL----- 120 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l----- 120 (457)
++|++|+|++|.++ .+|+..+ ++|++|+|++|.|++.++ .|.++++|+.|++++|.++ +..|..|..+
T Consensus 102 ~~L~~L~L~~n~l~-~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L 177 (332)
T 2ft3_A 102 RKLQKLYISKNHLV-EIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYL 177 (332)
T ss_dssp TTCCEEECCSSCCC-SCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCC
T ss_pred CCCCEEECCCCcCC-ccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEE
Confidence 56777777777777 6665322 567777777777766555 4666667777777766664 2444444443
Q ss_pred ---------------CCCCEEEeeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecC
Q 012745 121 ---------------HRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQI 183 (457)
Q Consensus 121 ---------------~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~ 183 (457)
++|+.|+|++|.+++..+..|..+++|+.|+|++|+|++..+.. .+++|+.|+|++|+++..+
T Consensus 178 ~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp 257 (332)
T 2ft3_A 178 RISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVP 257 (332)
T ss_dssp BCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCC
T ss_pred ECcCCCCCccCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecC
Confidence 45666666666666666666777777777777777777665543 6677777777777777555
Q ss_pred CCchhhhccCccccccCcC
Q 012745 184 PVTPALVRFNASSFLLNIN 202 (457)
Q Consensus 184 p~~~~l~~l~~~~~~~n~~ 202 (457)
+....+.++..+.+.+|..
T Consensus 258 ~~l~~l~~L~~L~l~~N~l 276 (332)
T 2ft3_A 258 AGLPDLKLLQVVYLHTNNI 276 (332)
T ss_dssp TTGGGCTTCCEEECCSSCC
T ss_pred hhhhcCccCCEEECCCCCC
Confidence 5455566666677766654
No 102
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=1.5e-16 Score=139.87 Aligned_cols=113 Identities=28% Similarity=0.382 Sum_probs=103.5
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
+++++|+|++|+++ .+++..|..+++|++|+|++|+|++.++ .|.++++|++|+|++|+|++..+..|..+++|++|+
T Consensus 28 ~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 106 (177)
T 2o6r_A 28 SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELA 106 (177)
T ss_dssp TTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEEeCCCccc-EeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEE
Confidence 68999999999999 7887789999999999999999998887 678999999999999999988777899999999999
Q ss_pred eeccccCCCCcccccCCCccceeecccccccCCCC
Q 012745 128 LANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIP 162 (457)
Q Consensus 128 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~ 162 (457)
|++|+|++..+..|..+++|++|+|++|++++..+
T Consensus 107 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 107 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99999997777778999999999999999986544
No 103
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.67 E-value=1.3e-16 Score=152.16 Aligned_cols=145 Identities=26% Similarity=0.393 Sum_probs=127.5
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEe
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVL 128 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 128 (457)
.+|+.|++++|.+. .++ .+..+++|+.|+|++|+|++.++ +.++++|++|+|++|++++ +| .+..+++|++|+|
T Consensus 46 ~~L~~L~l~~~~i~-~~~--~~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L 119 (291)
T 1h6t_A 46 NSIDQIIANNSDIK-SVQ--GIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSL 119 (291)
T ss_dssp HTCCEEECTTSCCC-CCT--TGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEEC
T ss_pred CcccEEEccCCCcc-cCh--hHhcCCCCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEEC
Confidence 47999999999999 775 48899999999999999998776 8999999999999999995 33 5999999999999
Q ss_pred eccccCCCCcccccCCCccceeecccccccCCCCCCCCCCCcEEEeecCcceecCCCchhhhccCccccccCcC
Q 012745 129 ANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPFNQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNIN 202 (457)
Q Consensus 129 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~ 202 (457)
++|++++. ..+..+++|+.|+|++|++++...-..+++|+.|++++|++++..| ...+.++..+.+.+|..
T Consensus 120 ~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 120 EHNGISDI--NGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp TTSCCCCC--GGGGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCC
T ss_pred CCCcCCCC--hhhcCCCCCCEEEccCCcCCcchhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCcC
Confidence 99999964 5689999999999999999986322388999999999999998776 67778888888888864
No 104
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.67 E-value=1.2e-16 Score=166.90 Aligned_cols=146 Identities=29% Similarity=0.350 Sum_probs=126.6
Q ss_pred CCcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 48 NGRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 48 ~~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
.++|+.|+|++|+|+ .+++ +..+++|+.|+|++|.|++. +.+..|++|+.|+|++|+|++. +.+..+++|+.|+
T Consensus 64 l~~L~~L~Ls~N~l~-~~~~--l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~ 137 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLT-DIKP--LTNLKNLGWLFLDENKIKDL-SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLY 137 (605)
T ss_dssp CTTCCEEECTTSCCC-CCGG--GGGCTTCCEEECCSSCCCCC-TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEE
T ss_pred CCCCCEEEeeCCCCC-CChh--hccCCCCCEEECcCCCCCCC-hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEE
Confidence 368999999999999 6654 88999999999999999864 4788999999999999999953 4688999999999
Q ss_pred eeccccCCCCcccccCCCccceeecccccccCCCCCCCCCCCcEEEeecCcceecCCCchhhhccCccccccCcC
Q 012745 128 LANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPFNQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNIN 202 (457)
Q Consensus 128 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~ 202 (457)
|++|+|++. ..|..+++|+.|+|++|.|++.+|...+++|+.|+|++|+|++. |.+..+.+|..+.+.+|+.
T Consensus 138 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l 209 (605)
T 1m9s_A 138 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQEC 209 (605)
T ss_dssp CCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEE
T ss_pred CCCCccCCc--hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcC
Confidence 999999965 67899999999999999999887755889999999999999985 5566777888888888764
No 105
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.67 E-value=5.7e-17 Score=142.57 Aligned_cols=129 Identities=23% Similarity=0.303 Sum_probs=110.0
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEe
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVL 128 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 128 (457)
.++++|+|++|+++ .+|. .....++|+.|+|++|.|++. +.|..+++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 19 ~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 95 (176)
T 1a9n_A 19 VRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL 95 (176)
T ss_dssp TSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred CCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEEC
Confidence 57999999999999 7753 333344999999999999987 78899999999999999999765566689999999999
Q ss_pred eccccCCCCcc--cccCCCccceeecccccccCCCCC----C-CCCCCcEEEeecCccee
Q 012745 129 ANNQISGPIPE--SLSNLKRLYMLYLQDNKFTGPIPP----F-NQTNLRFFNVSNNDLSG 181 (457)
Q Consensus 129 s~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~~~----~-~~~~L~~L~l~~N~l~~ 181 (457)
++|+|+ .+|. .+..+++|+.|++++|+++..++. . .+++|+.||+++|.+..
T Consensus 96 ~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 96 TNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 999997 5665 789999999999999999865543 2 78999999999998764
No 106
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.66 E-value=8.1e-17 Score=155.40 Aligned_cols=104 Identities=20% Similarity=0.304 Sum_probs=84.7
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCch
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
.+.||+|+||.||+|. ..+|+.||||+++.... +.+|+.++++++|||||+++++|.+++..|||||||++|+|
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 137 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 137 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcH
Confidence 4579999999999999 56799999999976432 24799999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 419 FSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 419 ~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
.++|+......+ ....+.+.|++.|++++|
T Consensus 138 ~~~l~~~~~l~e---~~~~~~~~qi~~aL~ylH 167 (336)
T 4g3f_A 138 GQLIKQMGCLPE---DRALYYLGQALEGLEYLH 167 (336)
T ss_dssp HHHHHHHSSCCH---HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCH---HHHHHHHHHHHHHHHHHH
Confidence 999987543322 233344557777777654
No 107
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.66 E-value=1.2e-16 Score=165.48 Aligned_cols=155 Identities=26% Similarity=0.307 Sum_probs=117.3
Q ss_pred CCCCCCCCCCCc-----ccccceecCCCcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcE
Q 012745 27 LSSWKNGDRDVC-----KWQGIKECLNGRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKS 101 (457)
Q Consensus 27 l~~w~~~~~~~c-----~~~gv~~c~~~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~ 101 (457)
+.+|... ..+| .|.++..|...+|+.|+|++|+|+ .+|+. + +++|+.|+|++|+|+.++ ..+++|+.
T Consensus 33 l~~W~~~-~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~-~lp~~-l--~~~L~~L~Ls~N~l~~ip---~~l~~L~~ 104 (571)
T 3cvr_A 33 WDKWEKQ-ALPGENRNEAVSLLKECLINQFSELQLNRLNLS-SLPDN-L--PPQITVLEITQNALISLP---ELPASLEY 104 (571)
T ss_dssp HHHHHTT-CCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCS-CCCSC-C--CTTCSEEECCSSCCSCCC---CCCTTCCE
T ss_pred HHHHhcc-CCccccccchhhhccccccCCccEEEeCCCCCC-ccCHh-H--cCCCCEEECcCCCCcccc---cccCCCCE
Confidence 4568543 3577 699995488778999999999999 58873 3 378999999999998544 45788999
Q ss_pred EEccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccCCCccceeecccccccCCCCCCCCCCCcEEEeecCccee
Q 012745 102 LYLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPFNQTNLRFFNVSNNDLSG 181 (457)
Q Consensus 102 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~ 181 (457)
|+|++|+|++ +|. |.. +|+.|+|++|+|++ +|. .+++|+.|+|++|+|++.++ .+++|+.|+|++|+|++
T Consensus 105 L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~--~l~~L~~L~Ls~N~L~~ 174 (571)
T 3cvr_A 105 LDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTMLPE--LPTSLEVLSVRNNQLTF 174 (571)
T ss_dssp EECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC--CCTTCCEEECCSSCCSC
T ss_pred EEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCcCCC--cCCCcCEEECCCCCCCC
Confidence 9999999986 666 655 88888888888886 555 57888888888888886433 56778888888888877
Q ss_pred cCCCchhhhccCccccccCcC
Q 012745 182 QIPVTPALVRFNASSFLLNIN 202 (457)
Q Consensus 182 ~~p~~~~l~~l~~~~~~~n~~ 202 (457)
.++ +. .+|..+.+.+|..
T Consensus 175 lp~-l~--~~L~~L~Ls~N~L 192 (571)
T 3cvr_A 175 LPE-LP--ESLEALDVSTNLL 192 (571)
T ss_dssp CCC-CC--TTCCEEECCSSCC
T ss_pred cch-hh--CCCCEEECcCCCC
Confidence 433 32 5666666666643
No 108
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.66 E-value=2.4e-16 Score=154.32 Aligned_cols=147 Identities=14% Similarity=0.115 Sum_probs=113.0
Q ss_pred CCcccccceecCC-----------CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC--CCcCCCCCcE-
Q 012745 36 DVCKWQGIKECLN-----------GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP--NLLGLVNLKS- 101 (457)
Q Consensus 36 ~~c~~~gv~~c~~-----------~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~~l~~L~~- 101 (457)
|.|++..|. |.. .++++|+|++|+|+ .||+..|.++++|++|+|++|++.+.++ .|.++++|++
T Consensus 7 C~C~~~~v~-C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~ 84 (350)
T 4ay9_X 7 CHCSNRVFL-CQESKVTEIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEI 84 (350)
T ss_dssp SEEETTEEE-EESTTCCSCCTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEE
T ss_pred cEeeCCEEE-ecCCCCCccCcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhh
Confidence 678888888 753 46899999999999 9998899999999999999999876554 6889999876
Q ss_pred EEccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccCCCccceeeccc-ccccCCCCCC--CC-CCCcEEEeecC
Q 012745 102 LYLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQD-NKFTGPIPPF--NQ-TNLRFFNVSNN 177 (457)
Q Consensus 102 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~~~~--~~-~~L~~L~l~~N 177 (457)
+.+++|+|+.+.|..|..+++|++|++++|+|+...+..+....++..|++.+ |++....+.. .+ ..++.|+|++|
T Consensus 85 l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N 164 (350)
T 4ay9_X 85 RIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKN 164 (350)
T ss_dssp EEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSS
T ss_pred hcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccc
Confidence 67788999988899999999999999999999977666666666666666644 4454333322 22 34556666666
Q ss_pred cceecCC
Q 012745 178 DLSGQIP 184 (457)
Q Consensus 178 ~l~~~~p 184 (457)
+|+...+
T Consensus 165 ~i~~i~~ 171 (350)
T 4ay9_X 165 GIQEIHN 171 (350)
T ss_dssp CCCEECT
T ss_pred cccCCCh
Confidence 6665544
No 109
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.65 E-value=4.5e-16 Score=146.27 Aligned_cols=108 Identities=24% Similarity=0.343 Sum_probs=82.7
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc---ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY---PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|. ..+|+.||||++++... ...+.|.+|++++++++|||||++++++.+++..|+||||+ +
T Consensus 18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~ 96 (275)
T 3hyh_A 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-G 96 (275)
T ss_dssp EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-C
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-C
Confidence 4689999999999999 56799999999976432 33567999999999999999999999999999999999999 5
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
|+|.+++.++....+.. ..+.+.|++.|+.++|
T Consensus 97 g~L~~~l~~~~~l~e~~---~~~~~~qi~~al~ylH 129 (275)
T 3hyh_A 97 NELFDYIVQRDKMSEQE---ARRFFQQIISAVEYCH 129 (275)
T ss_dssp EEHHHHHHHSCSCCHHH---HHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCCCHHH---HHHHHHHHHHHHHHHH
Confidence 89999998765433333 3334456666666643
No 110
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=2.7e-16 Score=137.06 Aligned_cols=130 Identities=22% Similarity=0.215 Sum_probs=111.3
Q ss_pred cCCCCCCEEEeecCccc-ccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccCCCccc
Q 012745 71 NQLDQLRVLSFKGNSIS-GQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLY 148 (457)
Q Consensus 71 ~~l~~L~~L~L~~N~l~-~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 148 (457)
...++|+.|+|++|.|+ +.+| .+..+++|+.|+|++|.|++. ..|..+++|++|+|++|++++.+|..+..+++|+
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 34578999999999998 4445 778999999999999999966 7899999999999999999987888888899999
Q ss_pred eeecccccccCCC--CCC-CCCCCcEEEeecCcceecCC----CchhhhccCccccccCcC
Q 012745 149 MLYLQDNKFTGPI--PPF-NQTNLRFFNVSNNDLSGQIP----VTPALVRFNASSFLLNIN 202 (457)
Q Consensus 149 ~L~l~~N~l~~~~--~~~-~~~~L~~L~l~~N~l~~~~p----~~~~l~~l~~~~~~~n~~ 202 (457)
+|+|++|+|++.. ... .+++|+.|++++|++++.++ .+..++++..+.+.+|..
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 9999999999864 233 88999999999999998776 455567777777777753
No 111
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.65 E-value=9.6e-16 Score=165.89 Aligned_cols=150 Identities=14% Similarity=0.161 Sum_probs=115.0
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcC--------CCCCcEEEccCCccccCCCccCC--
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLG--------LVNLKSLYLNDNNFSGKFPGSLS-- 118 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--------l~~L~~L~Ls~N~l~~~~p~~~~-- 118 (457)
.+|+.|+|++|.++ .+|...+..+++|+.|+|++|+|+.+++.+.. |++|+.|+|++|+|+ .+|..+.
T Consensus 673 ~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~ 750 (876)
T 4ecn_A 673 INASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRAT 750 (876)
T ss_dssp CCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTT
T ss_pred CCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhc
Confidence 36888888888888 78876777888888888888888865553332 238888888888888 6777776
Q ss_pred CCCCCCEEEeeccccCCCCcccccCCCccceeeccc------ccccCCCCCC--CCCCCcEEEeecCcceecCCCchhhh
Q 012745 119 SLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQD------NKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPVTPALV 190 (457)
Q Consensus 119 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~------N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~l~ 190 (457)
.+++|+.|+|++|+|++ +|..+..+++|+.|+|++ |++.+.+|.. .+++|+.|+|++|+| +.+|.. ...
T Consensus 751 ~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~-l~~ 827 (876)
T 4ecn_A 751 TLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEK-LTP 827 (876)
T ss_dssp TCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCS
T ss_pred cCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHh-hcC
Confidence 88888888888888886 677888888888888866 6777777765 788888888888888 555532 235
Q ss_pred ccCccccccCcCc
Q 012745 191 RFNASSFLLNINL 203 (457)
Q Consensus 191 ~l~~~~~~~n~~~ 203 (457)
+|..+.+.+|+..
T Consensus 828 ~L~~LdLs~N~l~ 840 (876)
T 4ecn_A 828 QLYILDIADNPNI 840 (876)
T ss_dssp SSCEEECCSCTTC
T ss_pred CCCEEECCCCCCC
Confidence 6777777777754
No 112
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.64 E-value=7.6e-17 Score=155.07 Aligned_cols=154 Identities=17% Similarity=0.153 Sum_probs=122.6
Q ss_pred CcEeEEEeCCCCCccccChhhh--cCCCCCCEEEeecCcccccCC-----CCcCCCCCcEEEccCCccccCCCccCCCCC
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVI--NQLDQLRVLSFKGNSISGQIP-----NLLGLVNLKSLYLNDNNFSGKFPGSLSSLH 121 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~--~~l~~L~~L~L~~N~l~~~~~-----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 121 (457)
++|++|+|++|.+.+.+|. .+ ..+++|+.|+|++|.+++..+ .+..+++|++|+|++|++++..|..|..++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~-~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPP-LPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp SCCCEEEEESCCCBSCCCC-CSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred CceeEEEeeCCEeccchhh-hhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 4599999999999977765 55 889999999999999987443 345799999999999999988889999999
Q ss_pred CCCEEEeeccccCCC--C--cccccCCCccceeecccccccCCCCC----C-CCCCCcEEEeecCcceecCC-Cchhh--
Q 012745 122 RLKIIVLANNQISGP--I--PESLSNLKRLYMLYLQDNKFTGPIPP----F-NQTNLRFFNVSNNDLSGQIP-VTPAL-- 189 (457)
Q Consensus 122 ~L~~L~Ls~N~l~~~--~--p~~~~~l~~L~~L~l~~N~l~~~~~~----~-~~~~L~~L~l~~N~l~~~~p-~~~~l-- 189 (457)
+|++|+|++|++.+. + +..+..+++|++|+|++|+|+...+. . .+++|+.|+|++|+|++..| ....+
T Consensus 170 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 249 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMW 249 (310)
T ss_dssp TCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCC
T ss_pred CCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccC
Confidence 999999999998642 2 23347889999999999999754332 1 66899999999999998854 33333
Q ss_pred -hccCccccccCcCc
Q 012745 190 -VRFNASSFLLNINL 203 (457)
Q Consensus 190 -~~l~~~~~~~n~~~ 203 (457)
.++..+.+.+|...
T Consensus 250 ~~~L~~L~Ls~N~l~ 264 (310)
T 4glp_A 250 SSALNSLNLSFAGLE 264 (310)
T ss_dssp CTTCCCEECCSSCCC
T ss_pred cCcCCEEECCCCCCC
Confidence 57777788777643
No 113
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.64 E-value=7.5e-16 Score=134.64 Aligned_cols=104 Identities=24% Similarity=0.298 Sum_probs=83.6
Q ss_pred eEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEeec
Q 012745 52 TKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLAN 130 (457)
Q Consensus 52 ~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 130 (457)
+.|++++|+|+ .+|.. + .++|+.|+|++|+|++.++ .|.++++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 12 ~~l~~s~n~l~-~ip~~-~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTG-I--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TEEECTTSCCS-SCCSC-C--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCcc-C--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 45788889998 78863 3 3788889999999888877 788888888888888888877777778888888888888
Q ss_pred cccCCCCcccccCCCccceeecccccccC
Q 012745 131 NQISGPIPESLSNLKRLYMLYLQDNKFTG 159 (457)
Q Consensus 131 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 159 (457)
|+|++..+..|..+++|++|+|++|+++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 88887666678888888887777777764
No 114
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.63 E-value=6.2e-16 Score=150.85 Aligned_cols=147 Identities=21% Similarity=0.264 Sum_probs=101.9
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEe
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVL 128 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 128 (457)
++|++|++++|.+. .+++ +..+++|+.|++++|.+++..+ +..+++|++|+|++|++++..+ +..+++|+.|+|
T Consensus 177 ~~L~~L~l~~n~l~-~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l 250 (347)
T 4fmz_A 177 TDLYSLSLNYNQIE-DISP--LASLTSLHYFTAYVNQITDITP-VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEI 250 (347)
T ss_dssp TTCSEEECTTSCCC-CCGG--GGGCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCCCEEEccCCccc-cccc--ccCCCccceeecccCCCCCCch-hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEEC
Confidence 57888888888888 5643 7777788888888887775554 6677778888888887774433 777777777777
Q ss_pred eccccCCCCcccccCCCccceeecccccccCCCCCCCCCCCcEEEeecCcceecCCC-chhhhccCccccccCcCc
Q 012745 129 ANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPFNQTNLRFFNVSNNDLSGQIPV-TPALVRFNASSFLLNINL 203 (457)
Q Consensus 129 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~-~~~l~~l~~~~~~~n~~~ 203 (457)
++|.+++. ..+..+++|++|++++|++++......+++|+.|++++|++++..|. +..++++..+.+.+|+..
T Consensus 251 ~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~ 324 (347)
T 4fmz_A 251 GTNQISDI--NAVKDLTKLKMLNVGSNQISDISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHIT 324 (347)
T ss_dssp CSSCCCCC--GGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCC
T ss_pred CCCccCCC--hhHhcCCCcCEEEccCCccCCChhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccc
Confidence 77777743 45777777777777777777652222667777777777777766542 233455666666676643
No 115
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.63 E-value=5.6e-16 Score=160.91 Aligned_cols=108 Identities=22% Similarity=0.353 Sum_probs=71.4
Q ss_pred CCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccCCCccceeeccc
Q 012745 75 QLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQD 154 (457)
Q Consensus 75 ~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 154 (457)
.|+.|+|++|.|++++ .|..+++|+.|+|++|+|+ .+|..|+.+++|+.|+|++|+|++ +| .|+.+++|+.|+|++
T Consensus 442 ~L~~L~Ls~n~l~~lp-~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 442 DVRVLHLAHKDLTVLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp TCSEEECTTSCCSSCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred CceEEEecCCCCCCCc-CccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCC
Confidence 3666777777776543 3666777777777777776 566667777777777777777764 45 566777777777777
Q ss_pred ccccCCC-CCC--CCCCCcEEEeecCcceecCCCc
Q 012745 155 NKFTGPI-PPF--NQTNLRFFNVSNNDLSGQIPVT 186 (457)
Q Consensus 155 N~l~~~~-~~~--~~~~L~~L~l~~N~l~~~~p~~ 186 (457)
|+|++.. |.. .+++|+.|+|++|+|++.+|..
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 7776664 333 5667777777777777666543
No 116
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.63 E-value=1e-15 Score=159.34 Aligned_cols=131 Identities=21% Similarity=0.214 Sum_probs=99.8
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
+++++|+|++|.++ .+++..|.++++|++|+|++|+|++..+ .|.++++|++|+|++|+|+ .+|.. .+++|++|+
T Consensus 52 ~~L~~L~Ls~N~i~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 52 PRTKALSLSQNSIS-ELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp TTCCEEECCSSCCC-CCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CCcCEEECCCCCcc-ccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 57888888888888 6766688888888888888888887776 6788888888888888888 45554 788888888
Q ss_pred eeccccCCC-CcccccCCCccceeecccccccCCCCCCCCCCC--cEEEeecCcc--eecCC
Q 012745 128 LANNQISGP-IPESLSNLKRLYMLYLQDNKFTGPIPPFNQTNL--RFFNVSNNDL--SGQIP 184 (457)
Q Consensus 128 Ls~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L--~~L~l~~N~l--~~~~p 184 (457)
|++|++++. +|..|.++++|++|+|++|+|++. ....+++| +.|++++|.+ ++..|
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~L~L~~L~L~~n~l~~~~~~~ 188 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL-DLLPVAHLHLSCILLDLVSYHIKGGET 188 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT-TTGGGTTSCEEEEEEEESSCCCCSSSC
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCccccC-chhhhhhceeeEEEeecccccccccCc
Confidence 888888763 457788888888888888888752 11244455 8888888888 66555
No 117
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.63 E-value=5.6e-16 Score=157.63 Aligned_cols=144 Identities=31% Similarity=0.326 Sum_probs=94.6
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEe
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVL 128 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 128 (457)
++|++|+|++|+++ .++ .+..+++|+.|+|++|.+++.++ +..+++|+.|++++|++++..+ +..+++|+.|+|
T Consensus 221 ~~L~~L~l~~n~l~-~~~--~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 294 (466)
T 1o6v_A 221 TNLDELSLNGNQLK-DIG--TLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP--LAGLTALTNLEL 294 (466)
T ss_dssp TTCCEEECCSSCCC-CCG--GGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEEC
T ss_pred CCCCEEECCCCCcc-cch--hhhcCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEc
Confidence 56777777777777 452 56677777777777777776554 6667777777777777775433 667777777777
Q ss_pred eccccCCCCcccccCCCccceeecccccccCCCCCCCCCCCcEEEeecCcceecCCCchhhhccCccccccCc
Q 012745 129 ANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPFNQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNI 201 (457)
Q Consensus 129 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~ 201 (457)
++|++++..+ +..+++|+.|+|++|++++..+...+++|+.|++++|++++. +....+.++..+.+.+|.
T Consensus 295 ~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~ 364 (466)
T 1o6v_A 295 NENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQ 364 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSC
T ss_pred CCCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCCc
Confidence 7777765433 666777777777777776665534666666666666666654 334445555555555554
No 118
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.63 E-value=1.1e-15 Score=133.68 Aligned_cols=113 Identities=23% Similarity=0.240 Sum_probs=100.3
Q ss_pred CCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccCCCccceeeccc
Q 012745 75 QLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQD 154 (457)
Q Consensus 75 ~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 154 (457)
..+.|++++|.|+.++..+ .++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 10 ~~~~l~~s~n~l~~ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 10 SGTTVDCSGKSLASVPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp ETTEEECTTSCCSSCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCCEEEeCCCCcCccCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 3578999999999876655 38999999999999998899999999999999999999988888899999999999999
Q ss_pred ccccCCCCCC--CCCCCcEEEeecCcceecCCCchhh
Q 012745 155 NKFTGPIPPF--NQTNLRFFNVSNNDLSGQIPVTPAL 189 (457)
Q Consensus 155 N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~l 189 (457)
|+|++.++.. .+++|+.|+|++|++++..+....+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~l~~l 124 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDILYL 124 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBGGGHHH
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCchhHHHH
Confidence 9999888764 7899999999999999887644433
No 119
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.62 E-value=1.7e-15 Score=142.16 Aligned_cols=127 Identities=21% Similarity=0.315 Sum_probs=111.3
Q ss_pred CCcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 48 NGRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 48 ~~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
.++|++|+|++|+|+ .+++ +..+++|+.|+|++|+|++.++ +.. ++|+.|+|++|+|++. +.+..+++|+.|+
T Consensus 62 l~~L~~L~L~~N~i~-~~~~--l~~l~~L~~L~L~~N~l~~l~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~ 134 (263)
T 1xeu_A 62 FTNLKELHLSHNQIS-DLSP--LKDLTKLEELSVNRNRLKNLNG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILS 134 (263)
T ss_dssp CTTCCEEECCSSCCC-CCGG--GTTCSSCCEEECCSSCCSCCTT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEE
T ss_pred CCCCCEEECCCCccC-CChh--hccCCCCCEEECCCCccCCcCc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEE
Confidence 368999999999999 6765 9999999999999999997655 333 9999999999999964 3699999999999
Q ss_pred eeccccCCCCcccccCCCccceeecccccccCCCCCCCCCCCcEEEeecCcceecC
Q 012745 128 LANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPFNQTNLRFFNVSNNDLSGQI 183 (457)
Q Consensus 128 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~ 183 (457)
|++|+|++. + .+..+++|+.|+|++|+|++...-..+++|+.|++++|++++.+
T Consensus 135 Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 135 IRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp CTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBCTTSTTCCCCCEEEEEEEEEECCC
T ss_pred CCCCcCCCC-h-HHccCCCCCEEECCCCcCcchHHhccCCCCCEEeCCCCcccCCc
Confidence 999999964 4 69999999999999999998733338899999999999999764
No 120
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.62 E-value=7.6e-16 Score=158.72 Aligned_cols=137 Identities=21% Similarity=0.192 Sum_probs=118.0
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
++|++|+|++|.++ .+++..|..+++|++|+|++|+|++..| .|.++++|++|+|++|+|+ .+|.. .+++|++|+
T Consensus 21 ~~L~~L~Ls~n~i~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 96 (520)
T 2z7x_B 21 QKTTILNISQNYIS-ELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLD 96 (520)
T ss_dssp TTCSEEECCSSCCC-CCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEE
T ss_pred ccccEEECCCCccc-ccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEe
Confidence 68999999999999 7777799999999999999999999877 8999999999999999999 56655 899999999
Q ss_pred eeccccCC-CCcccccCCCccceeecccccccCCCCCCCCCCC--cEEEeecCcc--eecCCCchhhhcc
Q 012745 128 LANNQISG-PIPESLSNLKRLYMLYLQDNKFTGPIPPFNQTNL--RFFNVSNNDL--SGQIPVTPALVRF 192 (457)
Q Consensus 128 Ls~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L--~~L~l~~N~l--~~~~p~~~~l~~l 192 (457)
|++|++++ .+|..|+.+++|++|+|++|.|++. ....+++| +.|++++|.+ .+..| ..+..+
T Consensus 97 L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~-~~~~l~~L~L~~L~l~~n~l~~~~~~~--~~l~~l 163 (520)
T 2z7x_B 97 LSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKS-SVLPIAHLNISKVLLVLGETYGEKEDP--EGLQDF 163 (520)
T ss_dssp CCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGG-GGGGGTTSCEEEEEEEECTTTTSSCCT--TTTTTC
T ss_pred ccCCccccccchhhhccCCcceEEEecCcccchh-hccccccceeeEEEeeccccccccccc--cccccc
Confidence 99999987 4789999999999999999999862 22256777 9999999999 66666 444443
No 121
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.62 E-value=2e-16 Score=150.74 Aligned_cols=109 Identities=21% Similarity=0.340 Sum_probs=81.0
Q ss_pred hcccccCCccEEEEEEe----cCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEec
Q 012745 340 AETLGRGTIGSTYKAVL----ESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYF 413 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 413 (457)
.+.||+|+||.||+|.. .+++.||||+++.... .....+.+|+++|++++|||||++++++.+++..|+|||||
T Consensus 29 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~ 108 (304)
T 3ubd_A 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFL 108 (304)
T ss_dssp EEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECCC
T ss_pred EEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcC
Confidence 46899999999999983 2478999999976432 23456889999999999999999999999999999999999
Q ss_pred CCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 414 PNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 414 ~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
++|||.++|++.....+..... .+.|++.+++++|
T Consensus 109 ~gg~L~~~l~~~~~l~e~~~~~---~~~qi~~aL~ylH 143 (304)
T 3ubd_A 109 RGGDLFTRLSKEVMFTEEDVKF---YLAELALALDHLH 143 (304)
T ss_dssp TTCEEHHHHHHHCCCCHHHHHH---HHHHHHHHHHHHH
T ss_pred CCCCHHHHHHhcCCCCHHHHHH---HHHHHHHHHHHHH
Confidence 9999999998754333333333 3446666666644
No 122
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.62 E-value=5.7e-16 Score=161.92 Aligned_cols=145 Identities=26% Similarity=0.395 Sum_probs=128.5
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEe
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVL 128 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 128 (457)
.+|+.|+|++|.|. .++ .+..+++|+.|+|++|.|++.++ +..|++|+.|+|++|+|++ +| .|..+++|+.|+|
T Consensus 43 ~~L~~L~l~~n~i~-~l~--~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~L 116 (605)
T 1m9s_A 43 NSIDQIIANNSDIK-SVQ--GIQYLPNVTKLFLNGNKLTDIKP-LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSL 116 (605)
T ss_dssp TTCCCCBCTTCCCC-CCT--TGGGCTTCCEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCC-CCh--HHccCCCCCEEEeeCCCCCCChh-hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEe
Confidence 57999999999999 775 58999999999999999998776 8899999999999999995 44 7999999999999
Q ss_pred eccccCCCCcccccCCCccceeecccccccCCCCCCCCCCCcEEEeecCcceecCCCchhhhccCccccccCcC
Q 012745 129 ANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPFNQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNIN 202 (457)
Q Consensus 129 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~ 202 (457)
++|+|++. ..+..+++|+.|+|++|+|++......+++|+.|+|++|.|++.+| +..+.+|..+.+.+|..
T Consensus 117 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i 187 (605)
T 1m9s_A 117 EHNGISDI--NGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHI 187 (605)
T ss_dssp TTSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCC
T ss_pred cCCCCCCC--ccccCCCccCEEECCCCccCCchhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCCC
Confidence 99999963 4699999999999999999987322389999999999999999877 67788888888888864
No 123
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=4e-16 Score=133.09 Aligned_cols=123 Identities=19% Similarity=0.238 Sum_probs=103.9
Q ss_pred CCCCCCEEEeecCccc-ccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccCCCccce
Q 012745 72 QLDQLRVLSFKGNSIS-GQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYM 149 (457)
Q Consensus 72 ~l~~L~~L~L~~N~l~-~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 149 (457)
..++|+.|+|++|.++ +..+ .+..+++|+.|+|++|++++. ..|..+++|++|+|++|.+++.+|..+..+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 4578999999999998 4455 788999999999999999966 78999999999999999999878988888999999
Q ss_pred eecccccccCCC--CCC-CCCCCcEEEeecCcceecCC----CchhhhccCccc
Q 012745 150 LYLQDNKFTGPI--PPF-NQTNLRFFNVSNNDLSGQIP----VTPALVRFNASS 196 (457)
Q Consensus 150 L~l~~N~l~~~~--~~~-~~~~L~~L~l~~N~l~~~~p----~~~~l~~l~~~~ 196 (457)
|++++|++++.. ... .+++|+.|++++|++++.++ ....++++..+.
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~ 146 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLD 146 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEET
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCccccc
Confidence 999999999753 333 88999999999999998766 233444444443
No 124
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.62 E-value=1.5e-15 Score=133.26 Aligned_cols=105 Identities=26% Similarity=0.369 Sum_probs=86.3
Q ss_pred eEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEeec
Q 012745 52 TKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLAN 130 (457)
Q Consensus 52 ~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 130 (457)
+.+++++|+++ .+|.. + .++|+.|+|++|+|++.++ .|.++++|+.|+|++|+|+++.+..|..+++|++|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~~-~--~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAG-I--PTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCSC-C--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCCC-c--CCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 57899999998 88873 3 3789999999999998877 788899999999999999876666678888899999999
Q ss_pred cccCCCCcccccCCCccceeecccccccCC
Q 012745 131 NQISGPIPESLSNLKRLYMLYLQDNKFTGP 160 (457)
Q Consensus 131 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 160 (457)
|+|++..+..|..+++|++|+|++|++...
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 988866666688888888888888877643
No 125
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.62 E-value=4.3e-16 Score=151.89 Aligned_cols=113 Identities=19% Similarity=0.202 Sum_probs=86.9
Q ss_pred HhcccccCCccEEEEEEec------CCcEEEEEEccccCc-ccHHHHHHHHHHHccCCC-CCCCcceeeeecC-CceEEE
Q 012745 339 SAETLGRGTIGSTYKAVLE------SGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRH-PNLVPLRAYFQAK-EERLLV 409 (457)
Q Consensus 339 ~~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~-~~~~lv 409 (457)
..+.||+|+||.||+|... +++.||||+++.... ...+.|.+|+++|.+++| ||||+++|+|... +..++|
T Consensus 68 l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV 147 (353)
T 4ase_A 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 147 (353)
T ss_dssp EEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred EeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEE
Confidence 4578999999999999842 246899999987543 345679999999999965 8999999999764 568999
Q ss_pred EEecCCCchHHHhhhCCCC-----------CCchhhHHH--HHHHHHHHHHHhcC
Q 012745 410 YDYFPNGSLFSLIHGTCCL-----------ATRPLFIFL--FSFFRLIKKVFQMS 451 (457)
Q Consensus 410 ~ey~~~GsL~~~l~~~~~~-----------~~~~l~~~~--r~~~~i~~~v~~~~ 451 (457)
||||++|+|.++|+..+.. ....++|.. +.+.|||.||++.+
T Consensus 148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH 202 (353)
T 4ase_A 148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA 202 (353)
T ss_dssp EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh
Confidence 9999999999999875321 112355544 35567888887743
No 126
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.61 E-value=2.2e-15 Score=132.16 Aligned_cols=113 Identities=18% Similarity=0.216 Sum_probs=99.3
Q ss_pred CCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccCCCccceeecccc
Q 012745 76 LRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDN 155 (457)
Q Consensus 76 L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 155 (457)
-+.+++++|+|+.++..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 14 ~~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 14 QTLVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SSEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CcEEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 3789999999987766554 89999999999999988999999999999999999999877777899999999999999
Q ss_pred cccCCCCCC--CCCCCcEEEeecCcceecCCCchhhh
Q 012745 156 KFTGPIPPF--NQTNLRFFNVSNNDLSGQIPVTPALV 190 (457)
Q Consensus 156 ~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p~~~~l~ 190 (457)
+|++.++.. .+++|+.|+|++|++.+.++....+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~~~~l~ 128 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECRDIMYLR 128 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBGGGHHHH
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccccHHHHH
Confidence 999887763 78999999999999998766444433
No 127
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.59 E-value=9.3e-17 Score=171.77 Aligned_cols=132 Identities=23% Similarity=0.329 Sum_probs=114.1
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEe
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVL 128 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 128 (457)
..|+.|+|++|.+. .+|+ .+..+++|+.|+|++|.|+.+++.|.+|++|+.|+|++|+|+ .+|..|+.|++|++|+|
T Consensus 224 ~~L~~L~Ls~n~l~-~l~~-~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 300 (727)
T 4b8c_D 224 QLWHALDLSNLQIF-NISA-NIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYF 300 (727)
T ss_dssp CCCCEEECTTSCCS-CCCG-GGGGCCSCSCCBCTTSCCSCCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEEC
T ss_pred CCCcEEECCCCCCC-CCCh-hhcCCCCCCEEEeeCCcCcccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEEC
Confidence 67999999999999 9987 455899999999999999955558999999999999999999 78999999999999999
Q ss_pred eccccCCCCcccccCCCccceeecccccccCCCCCC--CC-CCCcEEEeecCcceecCC
Q 012745 129 ANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQ-TNLRFFNVSNNDLSGQIP 184 (457)
Q Consensus 129 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~-~~L~~L~l~~N~l~~~~p 184 (457)
++|.|+ .+|..|+.+++|++|+|++|+|++.+|.. .+ ..+..|+|++|.+++.+|
T Consensus 301 ~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p 358 (727)
T 4b8c_D 301 FDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLP 358 (727)
T ss_dssp CSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_pred CCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCc
Confidence 999998 67888999999999999999999877654 11 112236677788877777
No 128
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.58 E-value=3.3e-15 Score=155.23 Aligned_cols=108 Identities=22% Similarity=0.406 Sum_probs=87.4
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCch
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
.+.||+|+||.||+|. ..+|+.||+|.+........+.+.+|+.+|+.++|||||+++++|.+.+..|+|||||++|+|
T Consensus 162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L 241 (573)
T 3uto_A 162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 241 (573)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBH
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcH
Confidence 4689999999999999 577999999999876555567789999999999999999999999999999999999999999
Q ss_pred HHHhhhCCC-CCCchhhHHHHHHHHHHHHHHhc
Q 012745 419 FSLIHGTCC-LATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 419 ~~~l~~~~~-~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+++|..... ..+... .+.+.||+.|+.++
T Consensus 242 ~~~i~~~~~~l~e~~~---~~~~~qi~~al~yl 271 (573)
T 3uto_A 242 FEKVADEHNKMSEDEA---VEYMRQVCKGLCHM 271 (573)
T ss_dssp HHHHTCTTSCEEHHHH---HHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCHHHH---HHHHHHHHHHHHHH
Confidence 999975431 122223 33444666666553
No 129
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.58 E-value=4.6e-15 Score=153.58 Aligned_cols=138 Identities=20% Similarity=0.153 Sum_probs=65.5
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCc------------------CCCCCcEEEccCCccc
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLL------------------GLVNLKSLYLNDNNFS 110 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~------------------~l~~L~~L~Ls~N~l~ 110 (457)
++|+.|+|++|+|+ .+| ..+++|+.|+|++|+|++++. +. .+++|+.|+|++|+|+
T Consensus 80 ~~L~~L~Ls~N~l~-~ip----~~l~~L~~L~Ls~N~l~~ip~-l~~~L~~L~Ls~N~l~~lp~~l~~L~~L~Ls~N~l~ 153 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP----ELPASLEYLDACDNRLSTLPE-LPASLKHLDVDNNQLTMLPELPALLEYINADNNQLT 153 (571)
T ss_dssp TTCSEEECCSSCCS-CCC----CCCTTCCEEECCSSCCSCCCC-CCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCS
T ss_pred CCCCEEECcCCCCc-ccc----cccCCCCEEEccCCCCCCcch-hhcCCCEEECCCCcCCCCCCcCccccEEeCCCCccC
Confidence 34555555555555 454 234555555555555554333 32 3444444444444444
Q ss_pred cCCCccCCCCCCCCEEEeeccccCCCCcccccCCCccceeecccccccCCCCCCCCCCC-------cEEEeecCcceecC
Q 012745 111 GKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPFNQTNL-------RFFNVSNNDLSGQI 183 (457)
Q Consensus 111 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L-------~~L~l~~N~l~~~~ 183 (457)
+ +|. .+++|+.|+|++|+|++ +|. |. ++|++|+|++|+|+..+. . ..+| +.|+|++|+|+..+
T Consensus 154 ~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~lp~-~-~~~L~~~~~~L~~L~Ls~N~l~~lp 223 (571)
T 3cvr_A 154 M-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLESLPA-V-PVRNHHSEETEIFFRCRENRITHIP 223 (571)
T ss_dssp C-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSSCCC-C-C--------CCEEEECCSSCCCCCC
T ss_pred c-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCchhh-H-HHhhhcccccceEEecCCCcceecC
Confidence 3 332 34455555555555553 333 33 555555555555553322 2 1144 55566666555443
Q ss_pred CCchhhhccCccccccCcC
Q 012745 184 PVTPALVRFNASSFLLNIN 202 (457)
Q Consensus 184 p~~~~l~~l~~~~~~~n~~ 202 (457)
+....+.++..+.+.+|+.
T Consensus 224 ~~l~~l~~L~~L~L~~N~l 242 (571)
T 3cvr_A 224 ENILSLDPTCTIILEDNPL 242 (571)
T ss_dssp GGGGGSCTTEEEECCSSSC
T ss_pred HHHhcCCCCCEEEeeCCcC
Confidence 3333344555555555554
No 130
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.58 E-value=1.2e-15 Score=134.07 Aligned_cols=130 Identities=18% Similarity=0.200 Sum_probs=107.7
Q ss_pred hhcCCCCCCEEEeecCcccccCCCCcCCC-CCcEEEccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccCCCcc
Q 012745 69 VINQLDQLRVLSFKGNSISGQIPNLLGLV-NLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRL 147 (457)
Q Consensus 69 ~~~~l~~L~~L~L~~N~l~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 147 (457)
.+..+.+|+.|+|++|.|+.. +.+..+. +|+.|+|++|+|++. +.|..+++|++|+|++|+|++..+..|..+++|
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hcCCcCCceEEEeeCCCCchh-HHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 467889999999999999965 5566655 999999999999975 689999999999999999997655666999999
Q ss_pred ceeecccccccCCCC--CC-CCCCCcEEEeecCcceecCCC----chhhhccCccccccCc
Q 012745 148 YMLYLQDNKFTGPIP--PF-NQTNLRFFNVSNNDLSGQIPV----TPALVRFNASSFLLNI 201 (457)
Q Consensus 148 ~~L~l~~N~l~~~~~--~~-~~~~L~~L~l~~N~l~~~~p~----~~~l~~l~~~~~~~n~ 201 (457)
++|+|++|+|+..++ .. .+++|+.|++++|+++..++. ...++++..+.+.+|.
T Consensus 91 ~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~ 151 (176)
T 1a9n_A 91 TELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVK 151 (176)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECC
T ss_pred CEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCC
Confidence 999999999986554 23 789999999999999866542 4556666666666664
No 131
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.58 E-value=3.8e-15 Score=151.42 Aligned_cols=147 Identities=29% Similarity=0.377 Sum_probs=126.6
Q ss_pred CCcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 48 NGRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 48 ~~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
.++|++|++++|.+. .+++ +..+++|+.|+|++|.+++. +.+..+++|+.|++++|++++..| +..+++|+.|+
T Consensus 198 l~~L~~L~l~~n~l~-~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 271 (466)
T 1o6v_A 198 LTNLESLIATNNQIS-DITP--LGILTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELK 271 (466)
T ss_dssp CTTCSEEECCSSCCC-CCGG--GGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEE
T ss_pred CCCCCEEEecCCccc-cccc--ccccCCCCEEECCCCCcccc-hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEE
Confidence 368999999999999 4543 77899999999999999864 568889999999999999996654 89999999999
Q ss_pred eeccccCCCCcccccCCCccceeecccccccCCCCCCCCCCCcEEEeecCcceecCCCchhhhccCccccccCcCc
Q 012745 128 LANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPFNQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNINL 203 (457)
Q Consensus 128 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~~~ 203 (457)
|++|.+++..+ +..+++|+.|+|++|++++..+...+++|+.|++++|++++..| ...+.++..+.+.+|...
T Consensus 272 l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~ 344 (466)
T 1o6v_A 272 LGANQISNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKVS 344 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCCC
T ss_pred CCCCccCcccc--ccCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCccC
Confidence 99999996544 88999999999999999987765588999999999999998877 567888888888888644
No 132
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.57 E-value=6.9e-15 Score=145.81 Aligned_cols=108 Identities=23% Similarity=0.394 Sum_probs=83.9
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeec------CCceEEEE
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQA------KEERLLVY 410 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~------~~~~~lv~ 410 (457)
.+.||+|+||.||+|. ..+|+.||||+++.... ...+.+.+|+++|++++|||||++++++.. .+..|+||
T Consensus 59 ~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivm 138 (398)
T 4b99_A 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 138 (398)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEE
Confidence 3689999999999999 57899999999976543 335678899999999999999999998754 35789999
Q ss_pred EecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 411 DYFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 411 ey~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
|||+ |+|.+++...+...+....... .|++.|++++|
T Consensus 139 E~~~-g~L~~~i~~~~~l~~~~~~~~~---~qil~al~ylH 175 (398)
T 4b99_A 139 DLME-SDLHQIIHSSQPLTLEHVRYFL---YQLLRGLKYMH 175 (398)
T ss_dssp ECCS-EEHHHHHTSSSCCCHHHHHHHH---HHHHHHHHHHH
T ss_pred eCCC-CCHHHHHHhcCCCCHHHHHHHH---HHHHHHHHHHH
Confidence 9997 7899999876544433344444 46666655543
No 133
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=1.7e-17 Score=148.92 Aligned_cols=132 Identities=23% Similarity=0.286 Sum_probs=111.3
Q ss_pred cEeEEEeCCCCCccccCh-----hhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCC
Q 012745 50 RVTKLVLEHLNLTGTLDE-----KVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLK 124 (457)
Q Consensus 50 ~l~~L~L~~n~l~~~l~~-----~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 124 (457)
+++.++++.+.+.|.+|+ ..+..+++|+.|+|++|.|++.+ .+.++++|+.|+|++|+|+ .+|..+..+++|+
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~ 96 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLE 96 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESCCC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCS
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcccc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCC
Confidence 566666666666655542 37899999999999999999854 8889999999999999999 6788888889999
Q ss_pred EEEeeccccCCCCcccccCCCccceeecccccccCCCC--CC-CCCCCcEEEeecCcceecCCC
Q 012745 125 IIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIP--PF-NQTNLRFFNVSNNDLSGQIPV 185 (457)
Q Consensus 125 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~-~~~~L~~L~l~~N~l~~~~p~ 185 (457)
.|+|++|+|++ +| .+..+++|++|+|++|+|++..+ .. .+++|+.|++++|++++.+|.
T Consensus 97 ~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 97 ELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp EEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred EEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 99999999996 45 68999999999999999986543 22 789999999999999988764
No 134
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.56 E-value=2.4e-14 Score=145.04 Aligned_cols=139 Identities=23% Similarity=0.183 Sum_probs=85.8
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEe
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVL 128 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 128 (457)
++|++|+|++|+++ .+| +..+++|++|+|++|.|++.+ +.++++|++|+|++|++++ +| +..+++|++|++
T Consensus 64 ~~L~~L~Ls~n~l~-~~~---~~~l~~L~~L~Ls~N~l~~~~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l 134 (457)
T 3bz5_A 64 TGLTKLICTSNNIT-TLD---LSQNTNLTYLACDSNKLTNLD--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNC 134 (457)
T ss_dssp TTCSEEECCSSCCS-CCC---CTTCTTCSEEECCSSCCSCCC--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCC-eEc---cccCCCCCEEECcCCCCceee--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEEC
Confidence 45666666666666 342 556666666666666666542 5566666666666666664 23 566666666666
Q ss_pred eccccCCCCcccccCCCccceeecccccccCCCCCCCCCCCcEEEeecCcceecCCCchhhhccCccccccCc
Q 012745 129 ANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPFNQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNI 201 (457)
Q Consensus 129 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~ 201 (457)
++|+|++. + ++.+++|++|++++|+..+.++...+++|+.|++++|++++. | ...+..+..+.+.+|.
T Consensus 135 ~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~l-~-l~~l~~L~~L~l~~N~ 202 (457)
T 3bz5_A 135 ARNTLTEI-D--VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITEL-D-VSQNKLLNRLNCDTNN 202 (457)
T ss_dssp TTSCCSCC-C--CTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCCC-C-CTTCTTCCEEECCSSC
T ss_pred CCCcccee-c--cccCCcCCEEECCCCCcccccccccCCcCCEEECCCCcccee-c-cccCCCCCEEECcCCc
Confidence 66666643 2 566666666666666444444433667788888888888774 3 4566667777776665
No 135
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.55 E-value=1.2e-14 Score=141.71 Aligned_cols=145 Identities=25% Similarity=0.335 Sum_probs=85.7
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEe
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVL 128 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 128 (457)
++|++|+|++|.++ .+++ +..+++|++|+|++|.++.. +.+.++++|++|+|++|++++. +. +..+++|+.|++
T Consensus 66 ~~L~~L~l~~n~i~-~~~~--~~~l~~L~~L~L~~n~i~~~-~~~~~l~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~l 139 (347)
T 4fmz_A 66 TNLEYLNLNGNQIT-DISP--LSNLVKLTNLYIGTNKITDI-SALQNLTNLRELYLNEDNISDI-SP-LANLTKMYSLNL 139 (347)
T ss_dssp TTCCEEECCSSCCC-CCGG--GTTCTTCCEEECCSSCCCCC-GGGTTCTTCSEEECTTSCCCCC-GG-GTTCTTCCEEEC
T ss_pred CCccEEEccCCccc-cchh--hhcCCcCCEEEccCCcccCc-hHHcCCCcCCEEECcCCcccCc-hh-hccCCceeEEEC
Confidence 45666666666666 5543 66666666666666666643 3566666666666666666633 22 666666666666
Q ss_pred eccccCCCCcccccCCCccceeecccccccCCCCCCCCCCCcEEEeecCcceecCCCchhhhccCccccccCc
Q 012745 129 ANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPFNQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNI 201 (457)
Q Consensus 129 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~ 201 (457)
++|.....++ .+..+++|++|++++|.+++..+...+++|+.|++++|.+.+..+ ...+..+..+.+.+|.
T Consensus 140 ~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~ 210 (347)
T 4fmz_A 140 GANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISP-LASLTSLHYFTAYVNQ 210 (347)
T ss_dssp TTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECTTSCCCCCGG-GGGCTTCCEEECCSSC
T ss_pred CCCCCccccc-chhhCCCCcEEEecCCCcCCchhhccCCCCCEEEccCCccccccc-ccCCCccceeecccCC
Confidence 6665443333 366666666666666666654443356666666666666665433 3444445555554443
No 136
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.55 E-value=7.4e-16 Score=159.99 Aligned_cols=121 Identities=26% Similarity=0.290 Sum_probs=107.7
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEe
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVL 128 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 128 (457)
..|+.|+|++|+|+ .+|. |..+++|+.|+|++|.|+.++..|.++++|+.|+|++|+|++ +| .|+.+++|+.|+|
T Consensus 441 ~~L~~L~Ls~n~l~-~lp~--~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~L 515 (567)
T 1dce_A 441 ADVRVLHLAHKDLT-VLCH--LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLL 515 (567)
T ss_dssp TTCSEEECTTSCCS-SCCC--GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEEC
T ss_pred cCceEEEecCCCCC-CCcC--ccccccCcEeecCcccccccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEEC
Confidence 35889999999999 6874 899999999999999999665589999999999999999996 66 8999999999999
Q ss_pred eccccCCCC-cccccCCCccceeecccccccCCCCCC-----CCCCCcEEEe
Q 012745 129 ANNQISGPI-PESLSNLKRLYMLYLQDNKFTGPIPPF-----NQTNLRFFNV 174 (457)
Q Consensus 129 s~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~~~~-----~~~~L~~L~l 174 (457)
++|+|++.. |..|..+++|+.|+|++|+|++.++.. .+++|+.|++
T Consensus 516 s~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 516 CNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 999999876 999999999999999999999887755 4788988874
No 137
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.55 E-value=2.7e-14 Score=144.69 Aligned_cols=138 Identities=19% Similarity=0.187 Sum_probs=63.5
Q ss_pred cEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEee
Q 012745 50 RVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLA 129 (457)
Q Consensus 50 ~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 129 (457)
+|++|+|++|.++ .+| .+..+++|++|+|++|.|++.+ +..+++|++|+|++|+|++. | |+.+++|++|+|+
T Consensus 43 ~L~~L~Ls~n~l~-~~~--~l~~l~~L~~L~Ls~n~l~~~~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~ 114 (457)
T 3bz5_A 43 TLTSLDCHNSSIT-DMT--GIEKLTGLTKLICTSNNITTLD--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCD 114 (457)
T ss_dssp TCCEEECCSSCCC-CCT--TGGGCTTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECC
T ss_pred CCCEEEccCCCcc-cCh--hhcccCCCCEEEccCCcCCeEc--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECC
Confidence 4455555555555 332 3444555555555555554431 44455555555555555432 2 4445555555555
Q ss_pred ccccCCCCcccccCCCccceeecccccccCCCCCCCCCCCcEEEeecCcceecCCCchhhhccCccccccC
Q 012745 130 NNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPFNQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLN 200 (457)
Q Consensus 130 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n 200 (457)
+|++++ +| +..+++|++|++++|+|++. +...+++|+.|++++|+..+.++ ...+.++..+.+.+|
T Consensus 115 ~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~l~~l~~L~~L~l~~n~~~~~~~-~~~l~~L~~L~ls~n 180 (457)
T 3bz5_A 115 TNKLTK-LD--VSQNPLLTYLNCARNTLTEI-DVSHNTQLTELDCHLNKKITKLD-VTPQTQLTTLDCSFN 180 (457)
T ss_dssp SSCCSC-CC--CTTCTTCCEEECTTSCCSCC-CCTTCTTCCEEECTTCSCCCCCC-CTTCTTCCEEECCSS
T ss_pred CCcCCe-ec--CCCCCcCCEEECCCCcccee-ccccCCcCCEEECCCCCcccccc-cccCCcCCEEECCCC
Confidence 555543 22 44455555555555555442 22244455555555553333332 233344444444444
No 138
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.53 E-value=2.1e-14 Score=140.13 Aligned_cols=101 Identities=19% Similarity=0.190 Sum_probs=85.7
Q ss_pred EeCCC-CCccccChhhhcCCCCCCEEEeec-CcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEeecc
Q 012745 55 VLEHL-NLTGTLDEKVINQLDQLRVLSFKG-NSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLANN 131 (457)
Q Consensus 55 ~L~~n-~l~~~l~~~~~~~l~~L~~L~L~~-N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 131 (457)
+++++ +|+ .||+ +..+++|+.|+|++ |+|+++++ .|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|++|
T Consensus 14 ~~~~~n~l~-~ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 14 RCTRDGALD-SLHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp ECCSSCCCT-TTTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EcCCCCCCC-ccCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 44566 788 7886 88999999999996 99998887 7899999999999999999988889999999999999999
Q ss_pred ccCCCCcccccCCCccceeecccccccC
Q 012745 132 QISGPIPESLSNLKRLYMLYLQDNKFTG 159 (457)
Q Consensus 132 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 159 (457)
+|++..+..|..++ |+.|+|.+|+|..
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 99976666666655 8888888887763
No 139
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.52 E-value=1.7e-14 Score=151.06 Aligned_cols=139 Identities=21% Similarity=0.291 Sum_probs=100.1
Q ss_pred CCCCCCCCCCCcccccce-------ecCCCcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCC
Q 012745 27 LSSWKNGDRDVCKWQGIK-------ECLNGRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNL 99 (457)
Q Consensus 27 l~~w~~~~~~~c~~~gv~-------~c~~~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L 99 (457)
...|... .++|.|.+.. .|...+++.|++++|+|+ .+|. .+. ++|+.|+|++|.|+.+++ .+++|
T Consensus 12 w~~W~~~-~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~-~l~--~~L~~L~L~~N~l~~lp~---~l~~L 83 (622)
T 3g06_A 12 WSAWRRA-APAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPD-CLP--AHITTLVIPDNNLTSLPA---LPPEL 83 (622)
T ss_dssp HHHHHHT-CCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCS-CCC--TTCSEEEECSCCCSCCCC---CCTTC
T ss_pred HHHHHhc-CCcchhccccccCcccccccCCCCcEEEecCCCcC-ccCh-hhC--CCCcEEEecCCCCCCCCC---cCCCC
Confidence 3457533 3678885532 244456889999999998 8876 332 789999999999886554 57888
Q ss_pred cEEEccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccCCCccceeecccccccCCCCCCCCCCCcEEEeecCcc
Q 012745 100 KSLYLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPFNQTNLRFFNVSNNDL 179 (457)
Q Consensus 100 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l 179 (457)
++|+|++|+|+ .+|. .+++|++|+|++|+|++ +|. .+++|+.|+|++|+|++.+. .+++|++|+|++|+|
T Consensus 84 ~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~lp~--~l~~L~~L~Ls~N~l 153 (622)
T 3g06_A 84 RTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTSLPV--LPPGLQELSVSDNQL 153 (622)
T ss_dssp CEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSCCCC--CCTTCCEEECCSSCC
T ss_pred CEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCcCCC--CCCCCCEEECcCCcC
Confidence 99999999888 4554 67888888888888885 444 45777788888887776433 246777777777777
Q ss_pred eecC
Q 012745 180 SGQI 183 (457)
Q Consensus 180 ~~~~ 183 (457)
++.+
T Consensus 154 ~~l~ 157 (622)
T 3g06_A 154 ASLP 157 (622)
T ss_dssp SCCC
T ss_pred CCcC
Confidence 7643
No 140
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.51 E-value=1.2e-13 Score=144.73 Aligned_cols=77 Identities=18% Similarity=0.128 Sum_probs=43.9
Q ss_pred CCCCEEEeeccccCCCCcccccCCCccceeecccccccCCCCCCCCCCCcEEEeecCcceecCCCchhhhccCccccccC
Q 012745 121 HRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPFNQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLN 200 (457)
Q Consensus 121 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n 200 (457)
++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+..++ .+++|+.|+|++|+|+..++.+..+.++..+.+.+|
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~lp~--~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L~~N 294 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTSLPM--LPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGN 294 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC--CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEECCSC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCcCCc--ccccCcEEeCCCCCCCcCCHHHhhccccCEEEecCC
Confidence 445555555555553 33 334556666666666664333 456677777777777744444445555666667777
Q ss_pred cCc
Q 012745 201 INL 203 (457)
Q Consensus 201 ~~~ 203 (457)
+..
T Consensus 295 ~l~ 297 (622)
T 3g06_A 295 PLS 297 (622)
T ss_dssp CCC
T ss_pred CCC
Confidence 643
No 141
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.50 E-value=1.6e-13 Score=138.84 Aligned_cols=118 Identities=24% Similarity=0.285 Sum_probs=62.3
Q ss_pred CCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccCCCccceeecc
Q 012745 74 DQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQ 153 (457)
Q Consensus 74 ~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 153 (457)
++|++|+|++|++++. |.|.++++|++|++++|++++ +|..+ .+|++|+|++|++++ +| .|..+++|++|+++
T Consensus 131 ~~L~~L~L~~n~l~~l-p~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEKL-PELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYAD 203 (454)
T ss_dssp TTCCEEECCSSCCSSC-CCCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred CCCCEEECcCCCCCCC-cccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECC
Confidence 4555555555555543 245555666666666666553 33322 355555666665554 33 35566666666666
Q ss_pred cccccCCCCCCCCCCCcEEEeecCcceecCCCchhhhccCccccccCc
Q 012745 154 DNKFTGPIPPFNQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNI 201 (457)
Q Consensus 154 ~N~l~~~~~~~~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~ 201 (457)
+|++++.+. ..++|+.|++++|.++ .+|.+..+.++..+.+.+|.
T Consensus 204 ~N~l~~l~~--~~~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N~ 248 (454)
T 1jl5_A 204 NNSLKKLPD--LPLSLESIVAGNNILE-ELPELQNLPFLTTIYADNNL 248 (454)
T ss_dssp SSCCSSCCC--CCTTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSSC
T ss_pred CCcCCcCCC--CcCcccEEECcCCcCC-cccccCCCCCCCEEECCCCc
Confidence 666654221 1235555666666555 33344445555555555553
No 142
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.49 E-value=1.2e-13 Score=132.51 Aligned_cols=107 Identities=18% Similarity=0.267 Sum_probs=87.2
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCch
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
.+.||+|+||.||+|. ..+++.||+|.+........+.|.+|++++.+++||||++++++|...+..++||||+++|+|
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 94 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcH
Confidence 5789999999999999 467999999998766555677899999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCCchhhHHH--HHHHHHHHHHHhc
Q 012745 419 FSLIHGTCCLATRPLFIFL--FSFFRLIKKVFQM 450 (457)
Q Consensus 419 ~~~l~~~~~~~~~~l~~~~--r~~~~i~~~v~~~ 450 (457)
.++++.... .++|.. +.+.|++.+++++
T Consensus 95 ~~~l~~~~~----~~~~~~~~~i~~qi~~al~~l 124 (310)
T 3s95_A 95 RGIIKSMDS----QYPWSQRVSFAKDIASGMAYL 124 (310)
T ss_dssp HHHHHHCCT----TSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccC----CCCHHHHHHHHHHHHHHHHHH
Confidence 999987431 133322 2344566655553
No 143
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.49 E-value=1.9e-13 Score=138.26 Aligned_cols=137 Identities=19% Similarity=0.169 Sum_probs=106.7
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEe
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVL 128 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 128 (457)
++|++|+|++|+++ .+| .|..+++|++|+|++|++++.+.. ..+|++|++++|++++ +| .|..+++|+.|++
T Consensus 131 ~~L~~L~L~~n~l~-~lp--~~~~l~~L~~L~l~~N~l~~lp~~---~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLE-KLP--ELQNSSFLKIIDVDNNSLKKLPDL---PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCS-SCC--CCTTCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCC-CCc--ccCCCCCCCEEECCCCcCcccCCC---cccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 57999999999999 587 499999999999999999975443 3589999999999996 56 6899999999999
Q ss_pred eccccCCCCcccccCCCccceeecccccccCCCCCC-CCCCCcEEEeecCcceecCCCchhhhccCccccccCc
Q 012745 129 ANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF-NQTNLRFFNVSNNDLSGQIPVTPALVRFNASSFLLNI 201 (457)
Q Consensus 129 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~l~~l~~~~~~~n~ 201 (457)
++|++++ +|... ++|++|++++|.++.. |.. .+++|+.|++++|++++.++ .+..+..+.+.+|.
T Consensus 203 ~~N~l~~-l~~~~---~~L~~L~l~~n~l~~l-p~~~~l~~L~~L~l~~N~l~~l~~---~~~~L~~L~l~~N~ 268 (454)
T 1jl5_A 203 DNNSLKK-LPDLP---LSLESIVAGNNILEEL-PELQNLPFLTTIYADNNLLKTLPD---LPPSLEALNVRDNY 268 (454)
T ss_dssp CSSCCSS-CCCCC---TTCCEEECCSSCCSSC-CCCTTCTTCCEEECCSSCCSSCCS---CCTTCCEEECCSSC
T ss_pred CCCcCCc-CCCCc---CcccEEECcCCcCCcc-cccCCCCCCCEEECCCCcCCcccc---cccccCEEECCCCc
Confidence 9999885 44432 5788888888888844 444 77888888888888886433 23566666666665
No 144
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.48 E-value=6.6e-14 Score=145.62 Aligned_cols=109 Identities=17% Similarity=0.244 Sum_probs=83.6
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc---ccHHHHH---HHHHHHccCCCCCCCcceeeeecCCceEEEEEe
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY---PRLEEFR---RHMDILGRLRHPNLVPLRAYFQAKEERLLVYDY 412 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~---~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 412 (457)
.++||+|+||.||+|. ..+|+.||||++++... .....+. .++.+++.++|||||+++++|.+.+.+|+||||
T Consensus 194 ~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy 273 (689)
T 3v5w_A 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL 273 (689)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEec
Confidence 3689999999999999 56799999999975421 2222333 446778889999999999999999999999999
Q ss_pred cCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 413 FPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 413 ~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
|+||+|.++|+......+... ...+.||+.|+.++|
T Consensus 274 ~~GGdL~~~l~~~~~l~E~~a---~~y~~qIl~aL~yLH 309 (689)
T 3v5w_A 274 MNGGDLHYHLSQHGVFSEADM---RFYAAEIILGLEHMH 309 (689)
T ss_dssp CCSCBHHHHHHHHCCCCHHHH---HHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHhcCCCCHHHH---HHHHHHHHHHHHHHH
Confidence 999999999987543333333 334456777766654
No 145
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.48 E-value=2.9e-13 Score=130.63 Aligned_cols=97 Identities=22% Similarity=0.283 Sum_probs=85.1
Q ss_pred cccHHHHHHHHh---------------cccccCCccEEEEEEe-cCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCC
Q 012745 329 SYSLEDLLKASA---------------ETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPN 392 (457)
Q Consensus 329 ~~~~~~~~~~~~---------------~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~n 392 (457)
.++++++..++. +.||+|+||.||+|.. .+|+.||||++........+.+.+|+.++++++|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 103 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence 577788877653 3799999999999995 479999999998766566778999999999999999
Q ss_pred CCcceeeeecCCceEEEEEecCCCchHHHhhhC
Q 012745 393 LVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGT 425 (457)
Q Consensus 393 iv~l~~~~~~~~~~~lv~ey~~~GsL~~~l~~~ 425 (457)
|++++++|...+..++||||+++|+|.+++...
T Consensus 104 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 136 (321)
T 2c30_A 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV 136 (321)
T ss_dssp BCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC
T ss_pred cceEEEEEEECCEEEEEEecCCCCCHHHHHHhc
Confidence 999999999999999999999999999998764
No 146
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.47 E-value=2.7e-13 Score=127.16 Aligned_cols=108 Identities=18% Similarity=0.270 Sum_probs=85.9
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCchH
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLF 419 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL~ 419 (457)
.+.||+|+||.||+|...+++.||+|++.... ...++|.+|++++.+++||||+++++++...+..++||||+++|+|.
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 93 (269)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHH
Confidence 46899999999999998778899999998654 44578999999999999999999999999999999999999999999
Q ss_pred HHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 420 SLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 420 ~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
++++..... .......+.+.+++.+++++
T Consensus 94 ~~l~~~~~~--~~~~~~~~i~~~i~~~l~~l 122 (269)
T 4hcu_A 94 DYLRTQRGL--FAAETLLGMCLDVCEGMAYL 122 (269)
T ss_dssp HHHHTTTTC--CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCcc--cCHHHHHHHHHHHHHHHHHH
Confidence 999865421 11222222334555555543
No 147
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.47 E-value=1.5e-13 Score=134.60 Aligned_cols=104 Identities=14% Similarity=0.275 Sum_probs=81.9
Q ss_pred hcccccCCccEEEEEEe----cCCcEEEEEEccccCcccHHHHHHHHHHHccC-CCCCCCcceeeeecCCceEEEEEecC
Q 012745 340 AETLGRGTIGSTYKAVL----ESGFIVTVKRLKDARYPRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKEERLLVYDYFP 414 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~ 414 (457)
.+.||+|+||.||+|+. .+++.||||.+.... ....+.+|+++|..+ +|||||++++++...+..|+|||||+
T Consensus 26 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~ 103 (361)
T 4f9c_A 26 EDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLE 103 (361)
T ss_dssp EEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCC
T ss_pred EEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCC
Confidence 36899999999999973 347899999987643 356788999999998 69999999999999999999999999
Q ss_pred CCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 415 NGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 415 ~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
+|+|.++++.- ....... .+.|++.+++++|
T Consensus 104 g~~L~~~~~~l---~~~~~~~---~~~qll~al~ylH 134 (361)
T 4f9c_A 104 HESFLDILNSL---SFQEVRE---YMLNLFKALKRIH 134 (361)
T ss_dssp CCCHHHHHTTC---CHHHHHH---HHHHHHHHHHHHH
T ss_pred cccHHHHHcCC---CHHHHHH---HHHHHHHHHHHHH
Confidence 99999999642 2233333 4446666665543
No 148
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.47 E-value=8.8e-14 Score=135.69 Aligned_cols=129 Identities=19% Similarity=0.153 Sum_probs=104.5
Q ss_pred CEEEeecC-cccccCCCCcCCCCCcEEEccC-CccccCCCccCCCCCCCCEEEeeccccCCCCcccccCCCccceeeccc
Q 012745 77 RVLSFKGN-SISGQIPNLLGLVNLKSLYLND-NNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQD 154 (457)
Q Consensus 77 ~~L~L~~N-~l~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 154 (457)
..++++++ +|+.++. +..+++|+.|+|++ |+|+++.+..|.+|++|+.|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 11 SGLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp SCEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred CEEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 35788998 9998777 99999999999996 999988888999999999999999999999999999999999999999
Q ss_pred ccccCCCCCC-CCCCCcEEEeecCcceecCCCchhhhc---cCccccccCcCcCCCC
Q 012745 155 NKFTGPIPPF-NQTNLRFFNVSNNDLSGQIPVTPALVR---FNASSFLLNINLCGEQ 207 (457)
Q Consensus 155 N~l~~~~~~~-~~~~L~~L~l~~N~l~~~~p~~~~l~~---l~~~~~~~n~~~c~~~ 207 (457)
|+|++.++.. ....|+.|+|++|.|.+.... ..|.. .....+..+...|..+
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~l-~~~~~~~~~~~~~l~~~~~~C~~~ 145 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLHCSCAL-RWLQRWEEEGLGGVPEQKLQCHGQ 145 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCCCCGGG-HHHHHHHHTTCSSCGGGCCCCSSS
T ss_pred CccceeCHHHcccCCceEEEeeCCCccCCCcc-HHHHHHHHhCcccccccCCCCCCC
Confidence 9999877665 334499999999999976542 22222 2233334455566543
No 149
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.47 E-value=1.8e-13 Score=131.86 Aligned_cols=110 Identities=27% Similarity=0.429 Sum_probs=89.0
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCchH
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLF 419 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL~ 419 (457)
.+.||+|+||.||+|...+++.||||++........+.|.+|+.+++.++||||++++++|...+..++||||+++|+|.
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 123 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLK 123 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTG
T ss_pred cceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHH
Confidence 35799999999999998889999999998766566778999999999999999999999999999999999999999999
Q ss_pred HHhhhCCCCCCchhhHHH--HHHHHHHHHHHhc
Q 012745 420 SLIHGTCCLATRPLFIFL--FSFFRLIKKVFQM 450 (457)
Q Consensus 420 ~~l~~~~~~~~~~l~~~~--r~~~~i~~~v~~~ 450 (457)
+++..... ....++|.. +.+.+++.+++++
T Consensus 124 ~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~l 155 (321)
T 2qkw_B 124 RHLYGSDL-PTMSMSWEQRLEICIGAARGLHYL 155 (321)
T ss_dssp GGSSSSCC-CSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccCC-CccccCHHHHHHHHHHHHHHHHHh
Confidence 99976531 112234433 2445566665554
No 150
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.47 E-value=2.5e-13 Score=131.11 Aligned_cols=111 Identities=19% Similarity=0.290 Sum_probs=82.6
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCC-------------
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKE------------- 404 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------------- 404 (457)
.+.||+|+||.||+|.. .+|+.||||+++.... ...+.+.+|+.++++++|||||+++++|...+
T Consensus 11 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~ 90 (332)
T 3qd2_B 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWL 90 (332)
T ss_dssp EEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC---
T ss_pred eeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhh
Confidence 46899999999999995 5799999999975443 34678999999999999999999999986543
Q ss_pred --------------------------------------------ceEEEEEecCCCchHHHhhhCCCCCCchhhHHHHHH
Q 012745 405 --------------------------------------------ERLLVYDYFPNGSLFSLIHGTCCLATRPLFIFLFSF 440 (457)
Q Consensus 405 --------------------------------------------~~~lv~ey~~~GsL~~~l~~~~~~~~~~l~~~~r~~ 440 (457)
..++||||+++|+|.++++..............+.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~ 170 (332)
T 3qd2_B 91 KDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIF 170 (332)
T ss_dssp -----------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHH
T ss_pred ccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHH
Confidence 278999999999999999876422211111122334
Q ss_pred HHHHHHHHhc
Q 012745 441 FRLIKKVFQM 450 (457)
Q Consensus 441 ~~i~~~v~~~ 450 (457)
.|++.+++++
T Consensus 171 ~qi~~aL~~L 180 (332)
T 3qd2_B 171 IQIAEAVEFL 180 (332)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4566655553
No 151
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.46 E-value=1.4e-13 Score=135.73 Aligned_cols=86 Identities=29% Similarity=0.510 Sum_probs=72.8
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCch
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
.+.||+|+||.||+|. ..+|+.||+|+++.......+.|.+|+.++.+++|||||+++++|...+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 3579999999999998 467999999999876555667899999999999999999999999999999999999999999
Q ss_pred HHHhhhC
Q 012745 419 FSLIHGT 425 (457)
Q Consensus 419 ~~~l~~~ 425 (457)
.+++...
T Consensus 174 ~~~l~~~ 180 (373)
T 2x4f_A 174 FDRIIDE 180 (373)
T ss_dssp HHHHHHT
T ss_pred HHHHHhc
Confidence 9999764
No 152
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.46 E-value=1.8e-13 Score=135.02 Aligned_cols=110 Identities=21% Similarity=0.343 Sum_probs=84.9
Q ss_pred hcccccCCccEEEEEEec----CCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecC
Q 012745 340 AETLGRGTIGSTYKAVLE----SGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFP 414 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 414 (457)
.+.||+|+||.||+|... ++..||||.++.... ...+.|.+|+.++.+++|||||+++++|...+..++||||++
T Consensus 50 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 129 (373)
T 2qol_A 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 129 (373)
T ss_dssp CEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred eeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCC
Confidence 468999999999999853 577899999986533 345679999999999999999999999999999999999999
Q ss_pred CCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 415 NGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 415 ~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
+|+|.++++.... ........+.+.+++.++++++
T Consensus 130 ~~sL~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH 164 (373)
T 2qol_A 130 NGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLS 164 (373)
T ss_dssp TCBHHHHHHTTTT--CSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999986531 1112222334456666665543
No 153
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.46 E-value=1.1e-14 Score=143.01 Aligned_cols=152 Identities=20% Similarity=0.245 Sum_probs=102.0
Q ss_pred CcEeEEEeCCCCCccccCh----hhhcCCC-CCCEEEeecCcccccCC-CCcCC-----CCCcEEEccCCccccCCCccC
Q 012745 49 GRVTKLVLEHLNLTGTLDE----KVINQLD-QLRVLSFKGNSISGQIP-NLLGL-----VNLKSLYLNDNNFSGKFPGSL 117 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~----~~~~~l~-~L~~L~L~~N~l~~~~~-~~~~l-----~~L~~L~Ls~N~l~~~~p~~~ 117 (457)
.+|++|||++|.++ .++. ..|..++ +|++|+|++|.|++..+ .+..+ ++|++|+|++|++++..+..+
T Consensus 22 ~~L~~L~Ls~n~l~-~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l 100 (362)
T 3goz_A 22 HGVTSLDLSLNNLY-SISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDEL 100 (362)
T ss_dssp TTCCEEECTTSCGG-GSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHH
T ss_pred CCceEEEccCCCCC-hHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHH
Confidence 45888888888888 5655 5677777 78888888888876655 55553 788888888888886655533
Q ss_pred ----CCC-CCCCEEEeeccccCCCCccccc----C-CCccceeecccccccCCCCCC------CC-CCCcEEEeecCcce
Q 012745 118 ----SSL-HRLKIIVLANNQISGPIPESLS----N-LKRLYMLYLQDNKFTGPIPPF------NQ-TNLRFFNVSNNDLS 180 (457)
Q Consensus 118 ----~~l-~~L~~L~Ls~N~l~~~~p~~~~----~-l~~L~~L~l~~N~l~~~~~~~------~~-~~L~~L~l~~N~l~ 180 (457)
..+ ++|++|+|++|+|++..+..+. . .++|++|+|++|.|++..... .+ ++|+.|+|++|+|+
T Consensus 101 ~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~ 180 (362)
T 3goz_A 101 VKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLA 180 (362)
T ss_dssp HHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGG
T ss_pred HHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCc
Confidence 334 7888888888888766555443 3 358888888888887432211 23 37888888888887
Q ss_pred ecCCC-----chhh-hccCccccccCc
Q 012745 181 GQIPV-----TPAL-VRFNASSFLLNI 201 (457)
Q Consensus 181 ~~~p~-----~~~l-~~l~~~~~~~n~ 201 (457)
+..+. .... .++..+.+.+|.
T Consensus 181 ~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 207 (362)
T 3goz_A 181 SKNCAELAKFLASIPASVTSLDLSANL 207 (362)
T ss_dssp GSCHHHHHHHHHTSCTTCCEEECTTSC
T ss_pred hhhHHHHHHHHHhCCCCCCEEECCCCC
Confidence 65541 0111 245555655554
No 154
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.46 E-value=2.5e-13 Score=131.53 Aligned_cols=108 Identities=19% Similarity=0.338 Sum_probs=85.3
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNG 416 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~G 416 (457)
.+.||+|+||.||+|. ..+|+.||||++..... ...+.+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 20 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~ 99 (328)
T 3fe3_A 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 99 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCC
Confidence 3689999999999999 47899999999976532 33567889999999999999999999999999999999999999
Q ss_pred chHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 417 SLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 417 sL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+|.+++............... .|++.+++++
T Consensus 100 ~L~~~l~~~~~l~~~~~~~~~---~qi~~al~~l 130 (328)
T 3fe3_A 100 EVFDYLVAHGRMKEKEARSKF---RQIVSAVQYC 130 (328)
T ss_dssp BHHHHHHHHCCCCHHHHHHHH---HHHHHHHHHH
T ss_pred cHHHHHHHcCCCCHHHHHHHH---HHHHHHHHHH
Confidence 999999865433322232333 4555555443
No 155
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.46 E-value=4.3e-13 Score=128.82 Aligned_cols=107 Identities=18% Similarity=0.256 Sum_probs=85.7
Q ss_pred cccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccC-CCCCCCcceeeeecCCceEEEEEecCCCch
Q 012745 341 ETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
++||+|+||.||+|. ..+++.||||++........+.+.+|++++.++ +||||+++++++...+..++||||+++|+|
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 98 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence 579999999999999 567999999999876555677899999999885 799999999999999999999999999999
Q ss_pred HHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 419 FSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 419 ~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
.++++.............. .|++.+++++
T Consensus 99 ~~~l~~~~~~~~~~~~~i~---~qi~~~l~~l 127 (316)
T 2ac3_A 99 LSHIHKRRHFNELEASVVV---QDVASALDFL 127 (316)
T ss_dssp HHHHHHHSSCCHHHHHHHH---HHHHHHHHHH
T ss_pred HHHHhccCCCCHHHHHHHH---HHHHHHHHHH
Confidence 9999875433322233333 4555555443
No 156
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.45 E-value=2e-15 Score=146.48 Aligned_cols=112 Identities=18% Similarity=0.248 Sum_probs=50.6
Q ss_pred ccccceecCCCcEeEEEeCCCCCccccChhhhcCC--CCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccC-CCc
Q 012745 39 KWQGIKECLNGRVTKLVLEHLNLTGTLDEKVINQL--DQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGK-FPG 115 (457)
Q Consensus 39 ~~~gv~~c~~~~l~~L~L~~n~l~~~l~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~-~p~ 115 (457)
.|.++. |....++.|++++|.+. +..+..+ ++++.|++++|.+++.++.+..+++|++|+|++|.+++. +|.
T Consensus 38 ~W~~~~-~~~~~~~~l~l~~~~~~----~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~ 112 (336)
T 2ast_B 38 RWYRLA-SDESLWQTLDLTGKNLH----PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHG 112 (336)
T ss_dssp HHHHHH-TCSTTSSEEECTTCBCC----HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHH
T ss_pred HHHHHh-cCchhheeeccccccCC----HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHH
Confidence 455554 44333455555554443 1233333 444444444444444444444444444444444444432 334
Q ss_pred cCCCCCCCCEEEeeccccCCCCcccccCCCccceeecccc
Q 012745 116 SLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDN 155 (457)
Q Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 155 (457)
.+..+++|++|+|++|.+++..|..+..+++|++|+|++|
T Consensus 113 ~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~ 152 (336)
T 2ast_B 113 ILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGC 152 (336)
T ss_dssp HHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTC
T ss_pred HHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCC
Confidence 4444444444444444444334444444444444444444
No 157
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.45 E-value=3.9e-13 Score=131.88 Aligned_cols=108 Identities=22% Similarity=0.397 Sum_probs=85.5
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc------ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEe
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY------PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDY 412 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 412 (457)
.+.||+|+||.||+|. ..+|+.||||.++.... ...+.+.+|+.++..++|||||+++++|...+..++||||
T Consensus 17 ~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~ 96 (361)
T 2yab_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILEL 96 (361)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEc
Confidence 4689999999999999 56799999999976532 1357899999999999999999999999999999999999
Q ss_pred cCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 413 FPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 413 ~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+++|+|.+++.......+...... +.|++.++.++
T Consensus 97 ~~gg~L~~~l~~~~~l~~~~~~~i---~~qi~~aL~~L 131 (361)
T 2yab_A 97 VSGGELFDFLAQKESLSEEEATSF---IKQILDGVNYL 131 (361)
T ss_dssp CCSCBHHHHHTTCSCCBHHHHHHH---HHHHHHHHHHH
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHH---HHHHHHHHHHH
Confidence 999999999987543332223333 34555555443
No 158
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.45 E-value=3.7e-13 Score=128.37 Aligned_cols=86 Identities=24% Similarity=0.518 Sum_probs=78.2
Q ss_pred cccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCchH
Q 012745 341 ETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLF 419 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL~ 419 (457)
+.||+|+||.||+|. ..+++.||||++........+.+.+|+.++++++|||||+++++|...+..++||||+++|+|.
T Consensus 26 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (297)
T 3fxz_A 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105 (297)
T ss_dssp EEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHH
Confidence 579999999999999 5779999999997665556778999999999999999999999999999999999999999999
Q ss_pred HHhhhCC
Q 012745 420 SLIHGTC 426 (457)
Q Consensus 420 ~~l~~~~ 426 (457)
+++....
T Consensus 106 ~~~~~~~ 112 (297)
T 3fxz_A 106 DVVTETC 112 (297)
T ss_dssp HHHHHSC
T ss_pred HHHhhcC
Confidence 9998753
No 159
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.44 E-value=3.4e-13 Score=131.58 Aligned_cols=108 Identities=22% Similarity=0.405 Sum_probs=84.7
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCc
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGS 417 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~Gs 417 (457)
.+.||+|+||.||+|. ..+|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 15 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~ 94 (347)
T 3zgw_A 15 HETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGE 94 (347)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCB
T ss_pred EEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCCC
Confidence 4689999999999999 57799999999976542 334568999999999999999999999999999999999999999
Q ss_pred hHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 418 LFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 418 L~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|.+++............. .+.|++.+++.+
T Consensus 95 L~~~l~~~~~l~~~~~~~---i~~qi~~aL~~L 124 (347)
T 3zgw_A 95 LFDYIISQDRLSEEETRV---VFRQIVSAVAYV 124 (347)
T ss_dssp HHHHHHHHSSCCHHHHHH---HHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHH---HHHHHHHHHHHH
Confidence 999997654322222222 334555555543
No 160
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.44 E-value=1.6e-13 Score=134.06 Aligned_cols=154 Identities=16% Similarity=0.111 Sum_probs=100.6
Q ss_pred CCcEeEEEeCCCCCccccChhhhcCCCCCCE-EEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCE
Q 012745 48 NGRVTKLVLEHLNLTGTLDEKVINQLDQLRV-LSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKI 125 (457)
Q Consensus 48 ~~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~-L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 125 (457)
.++|++|+|++|++.+.+|+..|.++++|+. +.+++|+|+.+++ .|.++++|++|++++|+|+...+..+....++..
T Consensus 53 l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~ 132 (350)
T 4ay9_X 53 FGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVL 132 (350)
T ss_dssp CTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEE
T ss_pred CCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhh
Confidence 3689999999999976888888999998775 6777899998888 7889999999999999998766656655556666
Q ss_pred EEeec-cccCCCCcccccCCC-ccceeecccccccCCCCCC-CCCCCcEEEeec-CcceecCCC-chhhhccCccccccC
Q 012745 126 IVLAN-NQISGPIPESLSNLK-RLYMLYLQDNKFTGPIPPF-NQTNLRFFNVSN-NDLSGQIPV-TPALVRFNASSFLLN 200 (457)
Q Consensus 126 L~Ls~-N~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~~~~-~~~~L~~L~l~~-N~l~~~~p~-~~~l~~l~~~~~~~n 200 (457)
|++.+ |++....+..|..+. .|+.|+|++|+|+.+.+.. ...+|+.|++++ |.++..++. +..+.++..+.+.+|
T Consensus 133 l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N 212 (350)
T 4ay9_X 133 LDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRT 212 (350)
T ss_dssp EEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTS
T ss_pred hhhccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCC
Confidence 66644 345444444454443 4556666666665444333 344455555543 333333321 233444455555554
Q ss_pred c
Q 012745 201 I 201 (457)
Q Consensus 201 ~ 201 (457)
.
T Consensus 213 ~ 213 (350)
T 4ay9_X 213 R 213 (350)
T ss_dssp C
T ss_pred C
Confidence 3
No 161
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.44 E-value=1.3e-13 Score=136.17 Aligned_cols=111 Identities=19% Similarity=0.289 Sum_probs=87.4
Q ss_pred HhcccccCCccEEEEEEe-cCCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCC
Q 012745 339 SAETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNG 416 (457)
Q Consensus 339 ~~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~G 416 (457)
..+.||+|+||.||+|.. .+++.||||.++.... ...+.|.+|+.++++++|||||+++++|...+..++||||+++|
T Consensus 118 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 197 (377)
T 3cbl_A 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197 (377)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred EeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCC
Confidence 357899999999999995 4789999999986532 23456889999999999999999999999989999999999999
Q ss_pred chHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 417 SLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 417 sL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
+|.++++.... ........+.+.|++.++++.+
T Consensus 198 ~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH 230 (377)
T 3cbl_A 198 DFLTFLRTEGA--RLRVKTLLQMVGDAAAGMEYLE 230 (377)
T ss_dssp BHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH
Confidence 99999986431 1122333345556777766643
No 162
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.44 E-value=2.8e-13 Score=138.62 Aligned_cols=111 Identities=21% Similarity=0.394 Sum_probs=88.3
Q ss_pred HhcccccCCccEEEEEEec-CCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCc
Q 012745 339 SAETLGRGTIGSTYKAVLE-SGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGS 417 (457)
Q Consensus 339 ~~~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~Gs 417 (457)
..+.||+|+||.||+|... ++..||||.++... ...++|.+|+.+|++++|||||+++++|...+..++|||||++|+
T Consensus 224 ~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~ 302 (495)
T 1opk_A 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 302 (495)
T ss_dssp EEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred eeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCC
Confidence 3578999999999999954 58999999998654 456789999999999999999999999999999999999999999
Q ss_pred hHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 418 LFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 418 L~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
|.++++.... ...........+.|++.++++++
T Consensus 303 L~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~LH 335 (495)
T 1opk_A 303 LLDYLRECNR-QEVSAVVLLYMATQISSAMEYLE 335 (495)
T ss_dssp HHHHHHHSCT-TTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999986431 11122223334556777766643
No 163
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.44 E-value=3.5e-13 Score=127.61 Aligned_cols=109 Identities=25% Similarity=0.280 Sum_probs=87.4
Q ss_pred hcccccCCccEEEEEEe-cCC-------cEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEE
Q 012745 340 AETLGRGTIGSTYKAVL-ESG-------FIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYD 411 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g-------~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 411 (457)
.+.||+|+||.||+|.. .++ ..||+|.+........+.|.+|+.++.+++||||++++++|...+..++|||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 92 (289)
T 4fvq_A 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQE 92 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEE
T ss_pred eeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEE
Confidence 46799999999999984 334 5799999987665667889999999999999999999999999999999999
Q ss_pred ecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 412 YFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 412 y~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|+++|+|.++++.... .....+..+.+.|++.+++++
T Consensus 93 ~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~L 129 (289)
T 4fvq_A 93 FVKFGSLDTYLKKNKN--CINILWKLEVAKQLAAAMHFL 129 (289)
T ss_dssp CCTTCBHHHHHHHTGG--GCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999987542 122333444455666666654
No 164
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.44 E-value=4.7e-13 Score=129.36 Aligned_cols=109 Identities=19% Similarity=0.296 Sum_probs=83.6
Q ss_pred hcccccCCccEEEEEEec----CCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecC
Q 012745 340 AETLGRGTIGSTYKAVLE----SGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFP 414 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 414 (457)
.+.||+|+||.||+|... .+..||||.++.... ...+.|.+|+.++.+++||||++++++|...+..++||||++
T Consensus 54 ~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 133 (325)
T 3kul_A 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYME 133 (325)
T ss_dssp EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCT
T ss_pred eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCC
Confidence 468999999999999952 345699999986533 345679999999999999999999999999889999999999
Q ss_pred CCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 415 NGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 415 ~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+|+|.++++..... .......+.+.+++.+++++
T Consensus 134 ~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~~L~~L 167 (325)
T 3kul_A 134 NGSLDTFLRTHDGQ--FTIMQLVGMLRGVGAGMRYL 167 (325)
T ss_dssp TCBHHHHHHTTTTC--SCHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHH
Confidence 99999999765311 11122222344555555543
No 165
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.43 E-value=7.2e-13 Score=128.13 Aligned_cols=108 Identities=22% Similarity=0.420 Sum_probs=85.3
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc------ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEe
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY------PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDY 412 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 412 (457)
.+.||+|+||.||+|. ..+|+.||||.+..... ...+.+.+|+.++.+++|||||+++++|...+..++||||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 95 (326)
T 2y0a_A 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95 (326)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEc
Confidence 5789999999999999 45799999999976432 2367899999999999999999999999999999999999
Q ss_pred cCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 413 FPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 413 ~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+++|+|.+++...........- ..+.+++.+++++
T Consensus 96 ~~~~~L~~~l~~~~~~~~~~~~---~i~~qi~~al~~l 130 (326)
T 2y0a_A 96 VAGGELFDFLAEKESLTEEEAT---EFLKQILNGVYYL 130 (326)
T ss_dssp CCSCBHHHHHTTSSCCBHHHHH---HHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHhcCCcCHHHHH---HHHHHHHHHHHHH
Confidence 9999999999865422222222 2334555555543
No 166
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.43 E-value=7.4e-13 Score=126.59 Aligned_cols=119 Identities=25% Similarity=0.391 Sum_probs=92.8
Q ss_pred cccHHHHHHHHh-----------cccccCCccEEEEEEecCCcEEEEEEccccCc----ccHHHHHHHHHHHccCCCCCC
Q 012745 329 SYSLEDLLKASA-----------ETLGRGTIGSTYKAVLESGFIVTVKRLKDARY----PRLEEFRRHMDILGRLRHPNL 393 (457)
Q Consensus 329 ~~~~~~~~~~~~-----------~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~----~~~~~~~~E~~~l~~l~H~ni 393 (457)
.|+++++.+++. +.||+|+||.||+|.. +++.||||.+..... ...+.|.+|+.++.+++||||
T Consensus 14 ~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 92 (307)
T 2nru_A 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL 92 (307)
T ss_dssp ECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTB
T ss_pred cccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCe
Confidence 788888888753 5799999999999987 488999999875421 335679999999999999999
Q ss_pred CcceeeeecCCceEEEEEecCCCchHHHhhhCCCCCCchhhHHH--HHHHHHHHHHHhc
Q 012745 394 VPLRAYFQAKEERLLVYDYFPNGSLFSLIHGTCCLATRPLFIFL--FSFFRLIKKVFQM 450 (457)
Q Consensus 394 v~l~~~~~~~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~l~~~~--r~~~~i~~~v~~~ 450 (457)
+++++++...+..++||||+++|+|.+++..... ...++|.. +.+.+++.+++++
T Consensus 93 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~l 149 (307)
T 2nru_A 93 VELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG--TPPLSWHMRCKIAQGAANGINFL 149 (307)
T ss_dssp CCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG--CCCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEecCCceEEEEEecCCCcHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999985431 12233433 2344555555543
No 167
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.43 E-value=3.1e-13 Score=129.73 Aligned_cols=109 Identities=29% Similarity=0.456 Sum_probs=85.4
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCc
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGS 417 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~Gs 417 (457)
.+.||+|+||.||+|.. +|+.||||++..... ...+.|.+|++++.+++||||+++++++...+..++||||+++|+
T Consensus 42 ~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 120 (309)
T 3p86_A 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS 120 (309)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCB
T ss_pred eeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCc
Confidence 46899999999999986 488999999976543 334679999999999999999999999999999999999999999
Q ss_pred hHHHhhhCCCCCCchhhHH--HHHHHHHHHHHHhcC
Q 012745 418 LFSLIHGTCCLATRPLFIF--LFSFFRLIKKVFQMS 451 (457)
Q Consensus 418 L~~~l~~~~~~~~~~l~~~--~r~~~~i~~~v~~~~ 451 (457)
|.++++.... ...+++. .+.+.|++.+++.++
T Consensus 121 L~~~l~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH 154 (309)
T 3p86_A 121 LYRLLHKSGA--REQLDERRRLSMAYDVAKGMNYLH 154 (309)
T ss_dssp HHHHHHSTTH--HHHSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999987531 1112222 223456666665543
No 168
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.43 E-value=2.6e-15 Score=145.65 Aligned_cols=151 Identities=15% Similarity=0.099 Sum_probs=88.9
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCccccc-CC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQ-IP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKII 126 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 126 (457)
.+++.|++++|.+.+..+ .+..+++|+.|+|++|.+++. .+ .+..+++|++|+|++|++++..+..|..+++|++|
T Consensus 70 ~~l~~L~l~~n~l~~~~~--~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L 147 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLA--EHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRL 147 (336)
T ss_dssp TTCSEEECTTCEECSCCC--SCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEE
T ss_pred ccceEEEcCCccccccch--hhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEE
Confidence 456777777777764333 244567777777777776643 33 55667777777777777766666666667777777
Q ss_pred Eeecc-ccCCC-CcccccCCCccceeecccc-cccCC-CCCC--CCC-CCcEEEeecCc--ce-ecCC-CchhhhccCcc
Q 012745 127 VLANN-QISGP-IPESLSNLKRLYMLYLQDN-KFTGP-IPPF--NQT-NLRFFNVSNND--LS-GQIP-VTPALVRFNAS 195 (457)
Q Consensus 127 ~Ls~N-~l~~~-~p~~~~~l~~L~~L~l~~N-~l~~~-~~~~--~~~-~L~~L~l~~N~--l~-~~~p-~~~~l~~l~~~ 195 (457)
+|++| .+++. ++..+..+++|++|+|++| .+++. ++.. .++ +|+.|++++|. ++ +.+| ....++++..+
T Consensus 148 ~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L 227 (336)
T 2ast_B 148 NLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHL 227 (336)
T ss_dssp ECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEE
T ss_pred ECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEE
Confidence 77777 45532 4455666677777777777 66532 1221 455 66666666663 33 1111 12234455555
Q ss_pred ccccCc
Q 012745 196 SFLLNI 201 (457)
Q Consensus 196 ~~~~n~ 201 (457)
.+.+|.
T Consensus 228 ~l~~~~ 233 (336)
T 2ast_B 228 DLSDSV 233 (336)
T ss_dssp ECTTCT
T ss_pred eCCCCC
Confidence 555554
No 169
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.43 E-value=2.3e-13 Score=131.38 Aligned_cols=123 Identities=33% Similarity=0.456 Sum_probs=93.7
Q ss_pred cccHHHHHHHH-----hcccccCCccEEEEEEecCCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeec
Q 012745 329 SYSLEDLLKAS-----AETLGRGTIGSTYKAVLESGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQA 402 (457)
Q Consensus 329 ~~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 402 (457)
.+++.++.... .+.||+|+||.||+|...+|+.||||++..... .....|.+|++++..++||||++++++|..
T Consensus 19 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 98 (326)
T 3uim_A 19 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT 98 (326)
T ss_dssp ECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECC
T ss_pred eecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEec
Confidence 56667765443 368999999999999987899999999986543 223468999999999999999999999999
Q ss_pred CCceEEEEEecCCCchHHHhhhCCCCCCchhhHHH--HHHHHHHHHHHhcCc
Q 012745 403 KEERLLVYDYFPNGSLFSLIHGTCCLATRPLFIFL--FSFFRLIKKVFQMSP 452 (457)
Q Consensus 403 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~l~~~~--r~~~~i~~~v~~~~~ 452 (457)
.+..++||||+++|+|.++++.... ....++|.. +.+.+++.++++.+.
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~ 149 (326)
T 3uim_A 99 PTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHD 149 (326)
T ss_dssp SSCCEEEEECCTTCBHHHHHHCCST-TCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEeccCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999987542 222344433 344566666665543
No 170
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.43 E-value=5.6e-13 Score=129.50 Aligned_cols=108 Identities=19% Similarity=0.261 Sum_probs=85.3
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccC---cccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDAR---YPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|. ..+|+.||+|++++.. ......+.+|+.++..++||||+++++++...+..++||||+++
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~g 89 (337)
T 1o6l_A 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 89 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 3689999999999999 4579999999997642 23456789999999999999999999999999999999999999
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|+|.+++...+......... .+.+++.++.++
T Consensus 90 g~L~~~l~~~~~~~~~~~~~---~~~qi~~aL~~L 121 (337)
T 1o6l_A 90 GELFFHLSRERVFTEERARF---YGAEIVSALEYL 121 (337)
T ss_dssp CBHHHHHHHHSCCCHHHHHH---HHHHHHHHHHHH
T ss_pred CcHHHHHHhcCCCCHHHHHH---HHHHHHHHHHHH
Confidence 99999998754333222323 334555555543
No 171
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.43 E-value=6.3e-13 Score=127.94 Aligned_cols=111 Identities=19% Similarity=0.413 Sum_probs=84.7
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCC--ceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKE--ERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|.. .+++.||||+++.... ...+.+.+|++++.+++||||+++++++.... ..++||||+++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (319)
T 4euu_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (319)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTT
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCC
Confidence 46899999999999994 5699999999976542 34677889999999999999999999987655 67999999999
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|+|.+++.................+.|++.+++++
T Consensus 94 ~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~L 128 (319)
T 4euu_A 94 GSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128 (319)
T ss_dssp CBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHH
Confidence 99999998753211112222233445666666553
No 172
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.42 E-value=5.9e-13 Score=126.40 Aligned_cols=86 Identities=21% Similarity=0.366 Sum_probs=76.1
Q ss_pred cccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCchH
Q 012745 341 ETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLF 419 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL~ 419 (457)
.+||+|+||.||+|. ..+++.||||.+........+.+.+|+.++..++||||+++++++...+..++||||+++|+|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 479999999999999 5678999999998765555678999999999999999999999999999999999999999999
Q ss_pred HHhhhCC
Q 012745 420 SLIHGTC 426 (457)
Q Consensus 420 ~~l~~~~ 426 (457)
+++....
T Consensus 108 ~~l~~~~ 114 (295)
T 2clq_A 108 ALLRSKW 114 (295)
T ss_dssp HHHHHTT
T ss_pred HHHHhhc
Confidence 9998753
No 173
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.42 E-value=5.6e-13 Score=128.66 Aligned_cols=108 Identities=20% Similarity=0.283 Sum_probs=84.4
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCch
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
.+.||+|+||.||+|. ..+++.||+|.+.... .....+.+|+.++..++||||+++++++...+..++||||+++|+|
T Consensus 10 ~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L 88 (321)
T 1tki_A 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDI 88 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBH
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCH
Confidence 4679999999999999 4568999999997543 4456788999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 419 FSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 419 ~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
.+++...... .........+.|++.+++++
T Consensus 89 ~~~l~~~~~~--~~~~~~~~i~~qi~~al~~l 118 (321)
T 1tki_A 89 FERINTSAFE--LNEREIVSYVHQVCEALQFL 118 (321)
T ss_dssp HHHHTSSSCC--CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCC--CCHHHHHHHHHHHHHHHHHH
Confidence 9999864311 11122223334555555553
No 174
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.42 E-value=6.6e-13 Score=130.33 Aligned_cols=107 Identities=20% Similarity=0.291 Sum_probs=84.8
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCch
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
.+.||+|+||.||++. ..+++.||||++.... ...+.+.+|+.++++++|||||++++++...+..++||||+++|+|
T Consensus 25 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L 103 (361)
T 3uc3_A 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGEL 103 (361)
T ss_dssp EEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCH
Confidence 4679999999999999 4579999999997654 3346788999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 419 FSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 419 ~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
.+++............... .|++.+++++
T Consensus 104 ~~~l~~~~~~~~~~~~~i~---~ql~~~L~~L 132 (361)
T 3uc3_A 104 YERICNAGRFSEDEARFFF---QQLLSGVSYC 132 (361)
T ss_dssp HHHHHHHSSCCHHHHHHHH---HHHHHHHHHH
T ss_pred HHHHHhcCCCCHHHHHHHH---HHHHHHHHHH
Confidence 9999765433322233333 4555555543
No 175
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.42 E-value=9.7e-13 Score=124.81 Aligned_cols=107 Identities=13% Similarity=0.057 Sum_probs=84.2
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCcc---cHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARYP---RLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|.. .+++.||||++...... ..+.|.+|+.++.+++|+||+++++++...+..|+||||+++
T Consensus 36 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 115 (286)
T 3uqc_A 36 LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRG 115 (286)
T ss_dssp EEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCE
T ss_pred EEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCC
Confidence 36799999999999995 56999999999865432 246799999999999999999999999999999999999999
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
|+|.++++... .... ..+.+.|++.+++++|
T Consensus 116 ~~L~~~l~~~~--~~~~---~~~i~~ql~~aL~~lH 146 (286)
T 3uqc_A 116 GSLQEVADTSP--SPVG---AIRAMQSLAAAADAAH 146 (286)
T ss_dssp EEHHHHHTTCC--CHHH---HHHHHHHHHHHHHHHH
T ss_pred CCHHHHHhcCC--ChHH---HHHHHHHHHHHHHHHH
Confidence 99999996532 1111 2223445666555543
No 176
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.42 E-value=7.2e-13 Score=130.10 Aligned_cols=108 Identities=21% Similarity=0.363 Sum_probs=85.2
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNG 416 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~G 416 (457)
.+.||+|+||.||+|. ..+|+.||+|++..... ...+.+.+|+.++.+++|||||+++++|...+..|+||||+++|
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg 113 (362)
T 2bdw_A 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 113 (362)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence 5789999999999998 46799999999976542 33467889999999999999999999999999999999999999
Q ss_pred chHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 417 SLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 417 sL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+|.+++............. .+.|++.+++++
T Consensus 114 ~L~~~l~~~~~~~~~~~~~---~~~qi~~al~~l 144 (362)
T 2bdw_A 114 ELFEDIVAREFYSEADASH---CIQQILESIAYC 144 (362)
T ss_dssp BHHHHHTTCSCCCHHHHHH---HHHHHHHHHHHH
T ss_pred CHHHHHHHcCCCCHHHHHH---HHHHHHHHHHHH
Confidence 9999998754322222222 334555555543
No 177
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.42 E-value=1.2e-12 Score=123.55 Aligned_cols=85 Identities=21% Similarity=0.391 Sum_probs=74.3
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCchH
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLF 419 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL~ 419 (457)
.+.||+|+||.||+|...++..||||+++... ...++|.+|++++.+++|+||++++++|...+..++||||+++|+|.
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (283)
T 3gen_A 29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 107 (283)
T ss_dssp EEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHH
T ss_pred HhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHH
Confidence 46899999999999998888899999998654 34578999999999999999999999999999999999999999999
Q ss_pred HHhhhC
Q 012745 420 SLIHGT 425 (457)
Q Consensus 420 ~~l~~~ 425 (457)
++++..
T Consensus 108 ~~l~~~ 113 (283)
T 3gen_A 108 NYLREM 113 (283)
T ss_dssp HHHHCG
T ss_pred HHHHHh
Confidence 999863
No 178
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.42 E-value=8.2e-13 Score=124.31 Aligned_cols=87 Identities=24% Similarity=0.441 Sum_probs=78.4
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCch
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
.+.||+|+||.||+|.. .++..||+|++........+.+.+|++++.+++||||++++++|...+..++||||+++|+|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 93 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL 93 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcH
Confidence 46899999999999994 56889999999876556678899999999999999999999999999999999999999999
Q ss_pred HHHhhhCC
Q 012745 419 FSLIHGTC 426 (457)
Q Consensus 419 ~~~l~~~~ 426 (457)
.+++....
T Consensus 94 ~~~~~~~~ 101 (277)
T 3f3z_A 94 FERVVHKR 101 (277)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHcC
Confidence 99998754
No 179
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.42 E-value=5.9e-13 Score=131.84 Aligned_cols=109 Identities=21% Similarity=0.325 Sum_probs=86.2
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCch
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
.+.||+|+||.||+|. ..+|+.||+|.+..........+.+|+.++..++|||||+++++|......++||||+++|+|
T Consensus 56 ~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L 135 (387)
T 1kob_A 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL 135 (387)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBH
T ss_pred EEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcH
Confidence 4679999999999999 457999999999876544566799999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 419 FSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 419 ~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
.+++...... .........+.|++.+++++
T Consensus 136 ~~~l~~~~~~--l~~~~~~~i~~qi~~aL~~L 165 (387)
T 1kob_A 136 FDRIAAEDYK--MSEAEVINYMRQACEGLKHM 165 (387)
T ss_dssp HHHTTCTTCC--BCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCC--CCHHHHHHHHHHHHHHHHHH
Confidence 9999864311 11222223344666665554
No 180
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.42 E-value=6.2e-13 Score=124.51 Aligned_cols=85 Identities=24% Similarity=0.400 Sum_probs=77.1
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCchH
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLF 419 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL~ 419 (457)
.+.||+|+||.||+|...++..||||.++... ...+++.+|+.++.+++||||++++++|...+..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (268)
T 3sxs_A 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLL 91 (268)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHH
Confidence 36799999999999998888899999998654 34577999999999999999999999999999999999999999999
Q ss_pred HHhhhC
Q 012745 420 SLIHGT 425 (457)
Q Consensus 420 ~~l~~~ 425 (457)
++++..
T Consensus 92 ~~l~~~ 97 (268)
T 3sxs_A 92 NYLRSH 97 (268)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 999864
No 181
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.41 E-value=7.9e-13 Score=130.21 Aligned_cols=87 Identities=22% Similarity=0.375 Sum_probs=75.7
Q ss_pred hcccccCCccEEEEEEe--------cCCcEEEEEEccccCc-ccHHHHHHHHHHHccC-CCCCCCcceeeeecCCceEEE
Q 012745 340 AETLGRGTIGSTYKAVL--------ESGFIVTVKRLKDARY-PRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKEERLLV 409 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~--------~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 409 (457)
.+.||+|+||.||+|.. .++..||||+++.... ...+.+.+|+.++.++ +|||||+++++|...+..|+|
T Consensus 86 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 165 (370)
T 2psq_A 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 165 (370)
T ss_dssp EEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEE
Confidence 46899999999999984 2356899999986543 3356799999999999 899999999999999999999
Q ss_pred EEecCCCchHHHhhhCC
Q 012745 410 YDYFPNGSLFSLIHGTC 426 (457)
Q Consensus 410 ~ey~~~GsL~~~l~~~~ 426 (457)
|||+++|+|.++++..+
T Consensus 166 ~e~~~~g~L~~~l~~~~ 182 (370)
T 2psq_A 166 VEYASKGNLREYLRARR 182 (370)
T ss_dssp EECCTTCBHHHHHHHTC
T ss_pred EEcCCCCCHHHHHHhhC
Confidence 99999999999998754
No 182
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.41 E-value=3.7e-13 Score=136.31 Aligned_cols=110 Identities=22% Similarity=0.344 Sum_probs=87.2
Q ss_pred HhcccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCch
Q 012745 339 SAETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 339 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
..+.||+|+||.||+|...++..||||.++... ...+.|.+|+.+|++++|||||++++++. .+..++|||||++|+|
T Consensus 192 ~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L 269 (454)
T 1qcf_A 192 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSL 269 (454)
T ss_dssp EEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBH
T ss_pred EEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcH
Confidence 357899999999999998888999999998654 45788999999999999999999999986 6678999999999999
Q ss_pred HHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 419 FSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 419 ~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
.++++..... ........+.+.|++.++++.+
T Consensus 270 ~~~l~~~~~~-~~~~~~~~~~~~qi~~~l~~LH 301 (454)
T 1qcf_A 270 LDFLKSDEGS-KQPLPKLIDFSAQIAEGMAFIE 301 (454)
T ss_dssp HHHHHSHHHH-TCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999854210 1122333344567777776643
No 183
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.41 E-value=7.6e-13 Score=127.90 Aligned_cols=104 Identities=22% Similarity=0.329 Sum_probs=83.0
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCcccHHHHHHHHHHHccCC-CCCCCcceeeeecCCceEEEEEecCCCc
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARYPRLEEFRRHMDILGRLR-HPNLVPLRAYFQAKEERLLVYDYFPNGS 417 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ey~~~Gs 417 (457)
++.||+|+||.||+|.. .+++.||||++... ....+.+|+.++..+. |||||+++++|...+..++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 36799999999999994 57999999999653 3567889999999997 9999999999999999999999999999
Q ss_pred hHHHhhhCCCCCCchhhHHHHHHHHHHHHHHh
Q 012745 418 LFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQ 449 (457)
Q Consensus 418 L~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~ 449 (457)
|.++++.............. .|++.++++
T Consensus 93 L~~~l~~~~~~~~~~~~~i~---~qi~~~l~~ 121 (325)
T 3kn6_A 93 LFERIKKKKHFSETEASYIM---RKLVSAVSH 121 (325)
T ss_dssp HHHHHHHCSCCCHHHHHHHH---HHHHHHHHH
T ss_pred HHHHHHhcCCCCHHHHHHHH---HHHHHHHHH
Confidence 99999876433322233333 345555444
No 184
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.41 E-value=8.5e-16 Score=137.73 Aligned_cols=127 Identities=20% Similarity=0.264 Sum_probs=107.6
Q ss_pred CCcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCCCCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 48 NGRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 48 ~~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
.++|++|+|++|+++ .+| .+..+++|+.|+|++|.|+..+..+..+++|++|+|++|+|++ +| .+..+++|+.|+
T Consensus 47 l~~L~~L~ls~n~l~-~l~--~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~ 121 (198)
T 1ds9_A 47 LKACKHLALSTNNIE-KIS--SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLY 121 (198)
T ss_dssp TTTCSEEECSEEEES-CCC--CHHHHTTCCEEEEEEEEECSCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEE
T ss_pred CCCCCEEECCCCCCc-ccc--ccccCCCCCEEECCCCCcccccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEE
Confidence 368999999999999 686 7899999999999999999665566678999999999999996 45 688999999999
Q ss_pred eeccccCCCCc-ccccCCCccceeecccccccCCCCC-----------C-CCCCCcEEEeecCccee
Q 012745 128 LANNQISGPIP-ESLSNLKRLYMLYLQDNKFTGPIPP-----------F-NQTNLRFFNVSNNDLSG 181 (457)
Q Consensus 128 Ls~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~~-----------~-~~~~L~~L~l~~N~l~~ 181 (457)
|++|+|++..+ ..+..+++|++|++++|++++.+|. . .+++|+.|| +|.++.
T Consensus 122 l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 122 MSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp ESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGTT
T ss_pred CCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccCH
Confidence 99999985332 4789999999999999999877654 2 678888876 666653
No 185
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.41 E-value=2.2e-13 Score=135.86 Aligned_cols=107 Identities=21% Similarity=0.252 Sum_probs=86.2
Q ss_pred cccccCCccEEEEEE-ecCCcEEEEEEccccCc---ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCC
Q 012745 341 ETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY---PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNG 416 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~G 416 (457)
+.||+|+||.||+|. ..+++.||+|++++... ...+.+.+|+.++..++|||||+++++|.+.+..|+||||+++|
T Consensus 75 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg 154 (410)
T 3v8s_A 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGG 154 (410)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTE
T ss_pred EEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 689999999999999 45689999999975321 22345889999999999999999999999999999999999999
Q ss_pred chHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 417 SLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 417 sL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
+|.++++... ....+..+.+.+++.+++++|
T Consensus 155 ~L~~~l~~~~----~~e~~~~~~~~qi~~aL~~LH 185 (410)
T 3v8s_A 155 DLVNLMSNYD----VPEKWARFYTAEVVLALDAIH 185 (410)
T ss_dssp EHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHH
Confidence 9999998753 223455555566766666543
No 186
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.41 E-value=1.1e-12 Score=124.89 Aligned_cols=87 Identities=22% Similarity=0.301 Sum_probs=76.2
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc---ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY---PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|. ..+++.||+|.+..... ...+.|.+|+.++.+++||||+++++++...+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 95 (294)
T 4eqm_A 16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEG 95 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCC
Confidence 3689999999999999 56799999999865432 2346789999999999999999999999999999999999999
Q ss_pred CchHHHhhhCC
Q 012745 416 GSLFSLIHGTC 426 (457)
Q Consensus 416 GsL~~~l~~~~ 426 (457)
|+|.+++....
T Consensus 96 ~~L~~~l~~~~ 106 (294)
T 4eqm_A 96 PTLSEYIESHG 106 (294)
T ss_dssp CBHHHHHHHHC
T ss_pred CCHHHHHHhcC
Confidence 99999998754
No 187
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.41 E-value=7.6e-13 Score=123.85 Aligned_cols=111 Identities=19% Similarity=0.291 Sum_probs=87.2
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecC--CceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAK--EERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|... ++.||||+++.... ...+.|.+|+.++.+++||||++++++|... +..++||||+++
T Consensus 15 ~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPY 93 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTT
T ss_pred HHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCC
Confidence 468999999999999975 88999999986542 3356799999999999999999999999876 678999999999
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcCc
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMSP 452 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~~ 452 (457)
|+|.++++..... ........+.+.|++.++++++.
T Consensus 94 ~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~ 129 (271)
T 3kmu_A 94 GSLYNVLHEGTNF-VVDQSQAVKFALDMARGMAFLHT 129 (271)
T ss_dssp CBHHHHHHSCSSC-CCCHHHHHHHHHHHHHHHHHHTT
T ss_pred CcHHHHHhhcccC-CCCHHHHHHHHHHHHHHHHHHhc
Confidence 9999999875421 11122233345677777776653
No 188
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.40 E-value=1.1e-12 Score=122.72 Aligned_cols=108 Identities=18% Similarity=0.249 Sum_probs=85.8
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCchH
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLF 419 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL~ 419 (457)
.+.||+|+||.||+|...+++.||+|.+.... ...+.+.+|++++.+++||||+++++++...+..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (267)
T 3t9t_A 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91 (267)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHH
T ss_pred eeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHH
Confidence 46799999999999998788899999998754 34578999999999999999999999999999999999999999999
Q ss_pred HHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 420 SLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 420 ~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
++++..... .........+.+++.+++.+
T Consensus 92 ~~~~~~~~~--~~~~~~~~~~~~i~~~l~~l 120 (267)
T 3t9t_A 92 DYLRTQRGL--FAAETLLGMCLDVCEGMAYL 120 (267)
T ss_dssp HHHHHTTTC--CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhCccc--CCHHHHHHHHHHHHHHHHHH
Confidence 999875321 11222222334555555543
No 189
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.40 E-value=8e-15 Score=145.28 Aligned_cols=133 Identities=23% Similarity=0.292 Sum_probs=77.3
Q ss_pred CcEeEEEeCCCCCcc----ccChhhhcCCCCCCEEEeecCcccccCC-CCc----CC---------CCCcEEEccCCccc
Q 012745 49 GRVTKLVLEHLNLTG----TLDEKVINQLDQLRVLSFKGNSISGQIP-NLL----GL---------VNLKSLYLNDNNFS 110 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~----~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~----~l---------~~L~~L~Ls~N~l~ 110 (457)
++|++|+|++|.+.+ .++. .+..+++|+.|+|++|.|+...+ .+. .+ ++|++|+|++|+|+
T Consensus 94 ~~L~~L~Ls~n~l~~~~~~~l~~-~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~ 172 (386)
T 2ca6_A 94 PKLHTVRLSDNAFGPTAQEPLID-FLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLE 172 (386)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHH-HHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCT
T ss_pred CcccEEECCCCcCCHHHHHHHHH-HHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCC
Confidence 567777777777774 2433 66677777777777777764332 222 22 66777777777665
Q ss_pred -cCCC---ccCCCCCCCCEEEeeccccCC-----CCcccccCCCccceeeccccccc----CCCCCC--CCCCCcEEEee
Q 012745 111 -GKFP---GSLSSLHRLKIIVLANNQISG-----PIPESLSNLKRLYMLYLQDNKFT----GPIPPF--NQTNLRFFNVS 175 (457)
Q Consensus 111 -~~~p---~~~~~l~~L~~L~Ls~N~l~~-----~~p~~~~~l~~L~~L~l~~N~l~----~~~~~~--~~~~L~~L~l~ 175 (457)
+.+| ..|..+++|+.|+|++|+|+. ..|..+..+++|++|+|++|.|+ ..++.. .+++|+.|+|+
T Consensus 173 ~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~ 252 (386)
T 2ca6_A 173 NGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLN 252 (386)
T ss_dssp GGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECT
T ss_pred cHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECC
Confidence 2233 244456666666666666651 23335556666666666666663 222221 45566666666
Q ss_pred cCcceec
Q 012745 176 NNDLSGQ 182 (457)
Q Consensus 176 ~N~l~~~ 182 (457)
+|.|++.
T Consensus 253 ~n~i~~~ 259 (386)
T 2ca6_A 253 DCLLSAR 259 (386)
T ss_dssp TCCCCHH
T ss_pred CCCCchh
Confidence 6666543
No 190
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.40 E-value=1e-12 Score=126.67 Aligned_cols=109 Identities=21% Similarity=0.299 Sum_probs=85.8
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc---ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY---PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||++. ..+|+.||+|+++.... ...+.+.+|+.++..++|||||++++++.+.+..|+||||+++
T Consensus 11 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~g 90 (318)
T 1fot_A 11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEG 90 (318)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCC
Confidence 4689999999999999 45799999999976421 3456788999999999999999999999999999999999999
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
|+|.++++......... ....+.+++.++.+++
T Consensus 91 g~L~~~l~~~~~~~~~~---~~~~~~qi~~aL~~LH 123 (318)
T 1fot_A 91 GELFSLLRKSQRFPNPV---AKFYAAEVCLALEYLH 123 (318)
T ss_dssp CBHHHHHHHTSSCCHHH---HHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCCCHHH---HHHHHHHHHHHHHHHH
Confidence 99999998754322222 2223446666655543
No 191
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.39 E-value=6.6e-13 Score=128.25 Aligned_cols=108 Identities=24% Similarity=0.277 Sum_probs=82.3
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCc
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGS 417 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~Gs 417 (457)
.+.||+|+||.||+|. ..+++.||||++..... ...+.+.+|+.++..++|||||++++++...+..++||||+++|+
T Consensus 12 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~ 91 (323)
T 3tki_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91 (323)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEE
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCc
Confidence 4689999999999999 45799999999965433 234568899999999999999999999999999999999999999
Q ss_pred hHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 418 LFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 418 L~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|.++++......... ..+.+.|++.+++++
T Consensus 92 L~~~l~~~~~~~~~~---~~~i~~qi~~aL~~L 121 (323)
T 3tki_A 92 LFDRIEPDIGMPEPD---AQRFFHQLMAGVVYL 121 (323)
T ss_dssp GGGGSBTTTBCCHHH---HHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCCHHH---HHHHHHHHHHHHHHH
Confidence 999998754322222 222334555555543
No 192
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.39 E-value=4.1e-13 Score=134.99 Aligned_cols=109 Identities=21% Similarity=0.291 Sum_probs=84.1
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCc---ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY---PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.++||+|+||.||+|.. .+++.||||++++... .....+.+|+.++..++|||||+++++|.+.+..|+|||||++
T Consensus 79 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~g 158 (437)
T 4aw2_A 79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVG 158 (437)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCC
Confidence 36899999999999995 5689999999975321 2233488999999999999999999999999999999999999
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|+|.++++.... ..........+.|++.++.++
T Consensus 159 g~L~~~l~~~~~--~l~e~~~~~~~~qi~~aL~~L 191 (437)
T 4aw2_A 159 GDLLTLLSKFED--RLPEEMARFYLAEMVIAIDSV 191 (437)
T ss_dssp CBHHHHHHTTTT--CCCHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHccC--CCCHHHHHHHHHHHHHHHHHH
Confidence 999999987321 111222333445666666554
No 193
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.39 E-value=6.7e-13 Score=134.31 Aligned_cols=110 Identities=23% Similarity=0.327 Sum_probs=86.5
Q ss_pred HhcccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCch
Q 012745 339 SAETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 339 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
..+.||+|+||.||+|....+..||||.++... ...+.|.+|+.+|++++|||||++++++.. +..++||||+++|+|
T Consensus 188 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL 265 (452)
T 1fmk_A 188 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 265 (452)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBH
T ss_pred eeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCH
Confidence 356899999999999998877889999998654 346789999999999999999999999876 678999999999999
Q ss_pred HHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 419 FSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 419 ~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
.++++.... .........+.+.|++.++++++
T Consensus 266 ~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~LH 297 (452)
T 1fmk_A 266 LDFLKGETG-KYLRLPQLVDMAAQIASGMAYVE 297 (452)
T ss_dssp HHHHSHHHH-TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 999985321 11122333344566777766643
No 194
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.39 E-value=1.1e-12 Score=126.80 Aligned_cols=108 Identities=22% Similarity=0.364 Sum_probs=79.0
Q ss_pred hcccccCCccEEEEEEe----cCCcEEEEEEccccCc----ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEE
Q 012745 340 AETLGRGTIGSTYKAVL----ESGFIVTVKRLKDARY----PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYD 411 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 411 (457)
.+.||+|+||.||++.. .+|+.||+|+++.... .....+.+|+.++.+++|||||++++++...+..|+|||
T Consensus 22 ~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 101 (327)
T 3a62_A 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILE 101 (327)
T ss_dssp EEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred EEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEe
Confidence 46899999999999985 4789999999986532 234567899999999999999999999999999999999
Q ss_pred ecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 412 YFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 412 y~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|+++|+|.+++............ ..+.|++.++.++
T Consensus 102 ~~~~~~L~~~l~~~~~~~~~~~~---~~~~qi~~al~~l 137 (327)
T 3a62_A 102 YLSGGELFMQLEREGIFMEDTAC---FYLAEISMALGHL 137 (327)
T ss_dssp CCTTEEHHHHHHHHSSCCHHHHH---HHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHhCCCCCHHHHH---HHHHHHHHHHHHH
Confidence 99999999999865422222222 2334555555543
No 195
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.39 E-value=1.5e-12 Score=124.40 Aligned_cols=108 Identities=19% Similarity=0.331 Sum_probs=82.3
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCch
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
.+.||+|+||.||++.. .+|+.||+|.++.......+.+.+|+.++.+++||||+++++++...+..++||||+++|+|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 93 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL 93 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred eeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccH
Confidence 47899999999999994 57999999999865544456789999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 419 FSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 419 ~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
.+++............. .+.+++.+++++
T Consensus 94 ~~~l~~~~~~~~~~~~~---~~~qi~~~l~~l 122 (304)
T 2jam_A 94 FDRILERGVYTEKDASL---VIQQVLSAVKYL 122 (304)
T ss_dssp HHHHHHHSCCCHHHHHH---HHHHHHHHHHHH
T ss_pred HHHHHHcCCCCHHHHHH---HHHHHHHHHHHH
Confidence 99997654222222222 334555555443
No 196
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.39 E-value=1.5e-12 Score=131.33 Aligned_cols=107 Identities=20% Similarity=0.337 Sum_probs=83.8
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNG 416 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~G 416 (457)
.+.||+|+||.||+|. ..+|+.||+|.+..... ...+.+.+|+.+++.++|||||++++++...+..++||||+++|
T Consensus 16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg 95 (444)
T 3soa_A 16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG 95 (444)
T ss_dssp EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCC
T ss_pred EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCC
Confidence 4789999999999998 56799999999976543 23457899999999999999999999999999999999999999
Q ss_pred chHHHhhhCCCCCCchhhHHHHHHHHHHHHHHh
Q 012745 417 SLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQ 449 (457)
Q Consensus 417 sL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~ 449 (457)
+|.+++.......+....... .|++.++++
T Consensus 96 ~L~~~i~~~~~~~e~~~~~i~---~qil~aL~~ 125 (444)
T 3soa_A 96 ELFEDIVAREYYSEADASHCI---QQILEAVLH 125 (444)
T ss_dssp BHHHHHHHCSCCCHHHHHHHH---HHHHHHHHH
T ss_pred CHHHHHHHcCCCCHHHHHHHH---HHHHHHHHH
Confidence 999999876533333333333 355555544
No 197
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.38 E-value=1.3e-12 Score=132.02 Aligned_cols=108 Identities=21% Similarity=0.300 Sum_probs=85.4
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCC-ceEEEEEecCCCch
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKE-ERLLVYDYFPNGSL 418 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~lv~ey~~~GsL 418 (457)
.+.||+|+||.||+|... |+.||||.++... ..+.|.+|+.+|.+++|||||+++++|...+ ..++|||||++|+|
T Consensus 198 ~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L 274 (450)
T 1k9a_A 198 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274 (450)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBH
T ss_pred EeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcH
Confidence 468999999999999876 7899999998653 4578999999999999999999999987665 78999999999999
Q ss_pred HHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 419 FSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 419 ~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
.++++.... .........+.+.+++.++++.+
T Consensus 275 ~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH 306 (450)
T 1k9a_A 275 VDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLE 306 (450)
T ss_dssp HHHHHHHCT-TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 999987531 11122333344567777766643
No 198
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.38 E-value=1.3e-12 Score=124.10 Aligned_cols=87 Identities=29% Similarity=0.519 Sum_probs=75.5
Q ss_pred hcccccCCccEEEEEEe-----cCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecC--CceEEEEEe
Q 012745 340 AETLGRGTIGSTYKAVL-----ESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAK--EERLLVYDY 412 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv~ey 412 (457)
.+.||+|+||.||+|.+ .+++.||||++........+.|.+|++++.+++||||++++++|... ...++||||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 94 (295)
T 3ugc_A 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 94 (295)
T ss_dssp EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEEC
T ss_pred hheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEe
Confidence 46899999999999983 36889999999876555567899999999999999999999998653 558999999
Q ss_pred cCCCchHHHhhhCC
Q 012745 413 FPNGSLFSLIHGTC 426 (457)
Q Consensus 413 ~~~GsL~~~l~~~~ 426 (457)
+++|+|.++++...
T Consensus 95 ~~~~~L~~~l~~~~ 108 (295)
T 3ugc_A 95 LPYGSLRDYLQKHK 108 (295)
T ss_dssp CTTCBHHHHHHHCG
T ss_pred CCCCCHHHHHHhcc
Confidence 99999999998754
No 199
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.38 E-value=1.3e-12 Score=127.60 Aligned_cols=108 Identities=22% Similarity=0.313 Sum_probs=85.0
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc---ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY---PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|. ..+|+.||||+++.... ...+.+.+|+.++..++||||+++++++...+..|+||||+++
T Consensus 46 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 125 (350)
T 1rdq_E 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCC
Confidence 3689999999999999 45799999999975421 3456788999999999999999999999999999999999999
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|+|.++++.......... .+.+.|++.++.++
T Consensus 126 g~L~~~l~~~~~~~~~~~---~~~~~qi~~aL~~L 157 (350)
T 1rdq_E 126 GEMFSHLRRIGRFSEPHA---RFYAAQIVLTFEYL 157 (350)
T ss_dssp CBHHHHHHHHCCCCHHHH---HHHHHHHHHHHHHH
T ss_pred CcHHHHHHHcCCCCHHHH---HHHHHHHHHHHHHH
Confidence 999999987542222222 22334555555543
No 200
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.38 E-value=1.2e-12 Score=130.20 Aligned_cols=111 Identities=19% Similarity=0.413 Sum_probs=84.9
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCC--ceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKE--ERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|.. .+|+.||||+++.... ...+.+.+|++++++++|||||++++++...+ ..++||||+++
T Consensus 14 ~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~ 93 (396)
T 4eut_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTT
T ss_pred EEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCC
Confidence 46899999999999994 5699999999976542 34677889999999999999999999998755 67999999999
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|+|.++++..............+.+.+++.+++++
T Consensus 94 g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~L 128 (396)
T 4eut_A 94 GSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128 (396)
T ss_dssp EEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHH
Confidence 99999998643211112222333445666666554
No 201
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.38 E-value=8.8e-13 Score=129.69 Aligned_cols=111 Identities=19% Similarity=0.228 Sum_probs=84.9
Q ss_pred hcccccCCccEEEEEEe------cCCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEe
Q 012745 340 AETLGRGTIGSTYKAVL------ESGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDY 412 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 412 (457)
.+.||+|+||.||+|.. .+++.||||+++.... .....|.+|+.++.+++|||||++++++......++||||
T Consensus 76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 155 (367)
T 3l9p_A 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLEL 155 (367)
T ss_dssp EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEe
Confidence 46899999999999984 2467899999976532 3456789999999999999999999999999999999999
Q ss_pred cCCCchHHHhhhCCCC--CCchhhHHH--HHHHHHHHHHHhc
Q 012745 413 FPNGSLFSLIHGTCCL--ATRPLFIFL--FSFFRLIKKVFQM 450 (457)
Q Consensus 413 ~~~GsL~~~l~~~~~~--~~~~l~~~~--r~~~~i~~~v~~~ 450 (457)
+++|+|.++++..+.. ....+++.. +.+.|++.+++++
T Consensus 156 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L 197 (367)
T 3l9p_A 156 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197 (367)
T ss_dssp CTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHH
Confidence 9999999999864321 112233322 2445666666553
No 202
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.38 E-value=5.1e-13 Score=133.29 Aligned_cols=110 Identities=18% Similarity=0.281 Sum_probs=85.5
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCc---ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY---PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||++.. .+|+.||||++++... ...+.+.+|..++..++|+|||+++++|.+.+..|+||||+++
T Consensus 66 ~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~g 145 (412)
T 2vd5_A 66 LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVG 145 (412)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCC
Confidence 36899999999999994 6799999999975321 2234588999999999999999999999999999999999999
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
|+|.++++.... ..........+.+++.++.++|
T Consensus 146 g~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~LH 179 (412)
T 2vd5_A 146 GDLLTLLSKFGE--RIPAEMARFYLAEIVMAIDSVH 179 (412)
T ss_dssp CBHHHHHHHHSS--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH
Confidence 999999986421 1122333334456666666543
No 203
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.38 E-value=2.5e-14 Score=141.77 Aligned_cols=155 Identities=15% Similarity=0.210 Sum_probs=123.1
Q ss_pred CCcEeEEEeCCCCCccc----cChhhhcCC---------CCCCEEEeecCccc-ccCC----CCcCCCCCcEEEccCCcc
Q 012745 48 NGRVTKLVLEHLNLTGT----LDEKVINQL---------DQLRVLSFKGNSIS-GQIP----NLLGLVNLKSLYLNDNNF 109 (457)
Q Consensus 48 ~~~l~~L~L~~n~l~~~----l~~~~~~~l---------~~L~~L~L~~N~l~-~~~~----~~~~l~~L~~L~Ls~N~l 109 (457)
.++|++|+|++|.+++. ++ ..+..+ ++|+.|+|++|+|+ ...+ .+..+++|++|+|++|+|
T Consensus 121 ~~~L~~L~L~~n~l~~~~~~~l~-~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l 199 (386)
T 2ca6_A 121 HTPLEHLYLHNNGLGPQAGAKIA-RALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGI 199 (386)
T ss_dssp CTTCCEEECCSSCCHHHHHHHHH-HHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCC
T ss_pred CCCCCEEECcCCCCCHHHHHHHH-HHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCC
Confidence 36899999999999732 33 356566 89999999999997 2222 456789999999999999
Q ss_pred c--c---CCCccCCCCCCCCEEEeeccccC----CCCcccccCCCccceeecccccccCC----CCC----CCCCCCcEE
Q 012745 110 S--G---KFPGSLSSLHRLKIIVLANNQIS----GPIPESLSNLKRLYMLYLQDNKFTGP----IPP----FNQTNLRFF 172 (457)
Q Consensus 110 ~--~---~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~l~~N~l~~~----~~~----~~~~~L~~L 172 (457)
+ + ..|..+..+++|+.|+|++|.|+ ..+|..+..+++|++|+|++|.|++. ++. ..+++|+.|
T Consensus 200 ~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L 279 (386)
T 2ca6_A 200 RPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTL 279 (386)
T ss_dssp CHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEE
T ss_pred CHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEE
Confidence 8 3 35558889999999999999995 56788899999999999999999864 222 137899999
Q ss_pred EeecCccee----cCCC-c-hhhhccCccccccCcCc
Q 012745 173 NVSNNDLSG----QIPV-T-PALVRFNASSFLLNINL 203 (457)
Q Consensus 173 ~l~~N~l~~----~~p~-~-~~l~~l~~~~~~~n~~~ 203 (457)
+|++|.|++ .+|. . ..++++..+.+.+|+..
T Consensus 280 ~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~ 316 (386)
T 2ca6_A 280 RLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 316 (386)
T ss_dssp ECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred ECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCC
Confidence 999999998 3442 2 23577888888888754
No 204
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.38 E-value=1.2e-12 Score=128.10 Aligned_cols=108 Identities=23% Similarity=0.288 Sum_probs=84.5
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccC---cccHHHHHHHHHHHccC-CCCCCCcceeeeecCCceEEEEEecC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDAR---YPRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKEERLLVYDYFP 414 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~ 414 (457)
.+.||+|+||.||+|. ..+|+.||||+++... ....+.+.+|..++..+ +|||||++++++...+..|+||||++
T Consensus 28 ~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 107 (353)
T 3txo_A 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVN 107 (353)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCC
Confidence 4689999999999999 5679999999997642 13456688999999988 69999999999999999999999999
Q ss_pred CCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 415 NGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 415 ~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+|+|.++++..+...+..... .+.|++.+++++
T Consensus 108 gg~L~~~l~~~~~~~~~~~~~---~~~qi~~aL~~L 140 (353)
T 3txo_A 108 GGDLMFHIQKSRRFDEARARF---YAAEIISALMFL 140 (353)
T ss_dssp SCBHHHHHHHHSSCCHHHHHH---HHHHHHHHHHHH
T ss_pred CCcHHHHHHHcCCCCHHHHHH---HHHHHHHHHHHH
Confidence 999999998754333222222 334555555543
No 205
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.38 E-value=1.2e-12 Score=129.48 Aligned_cols=108 Identities=18% Similarity=0.309 Sum_probs=85.8
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccC---cccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDAR---YPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||++. ..+++.||+|.+.... ....+.+.+|+.++..++|||||+++++|...+..|+||||+++
T Consensus 20 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~g 99 (384)
T 4fr4_A 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLG 99 (384)
T ss_dssp EEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence 4689999999999999 5668999999997542 23456789999999999999999999999999999999999999
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|+|.++++.......... ...+.+++.+++++
T Consensus 100 g~L~~~l~~~~~l~~~~~---~~~~~qi~~aL~~L 131 (384)
T 4fr4_A 100 GDLRYHLQQNVHFKEETV---KLFICELVMALDYL 131 (384)
T ss_dssp EEHHHHHHTTCCCCHHHH---HHHHHHHHHHHHHH
T ss_pred CcHHHHHHhcCCCCHHHH---HHHHHHHHHHHHHH
Confidence 999999987543222222 22344566655553
No 206
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.38 E-value=8.8e-13 Score=128.87 Aligned_cols=86 Identities=22% Similarity=0.383 Sum_probs=75.5
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccC-----cccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEec
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDAR-----YPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYF 413 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 413 (457)
.+.||+|+||.||+|. ..+|+.||||++.... ....+.+.+|+.++..++|||||+++++|...+..|+||||+
T Consensus 29 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 108 (351)
T 3c0i_A 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 108 (351)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred eeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCC
Confidence 5789999999999998 5679999999986432 124678999999999999999999999999999999999999
Q ss_pred CCCchHHHhhhC
Q 012745 414 PNGSLFSLIHGT 425 (457)
Q Consensus 414 ~~GsL~~~l~~~ 425 (457)
++|+|.+++...
T Consensus 109 ~g~~L~~~l~~~ 120 (351)
T 3c0i_A 109 DGADLCFEIVKR 120 (351)
T ss_dssp SSCBHHHHHHHH
T ss_pred CCCCHHHHHHHh
Confidence 999999888653
No 207
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.38 E-value=1.7e-12 Score=126.59 Aligned_cols=108 Identities=19% Similarity=0.271 Sum_probs=84.2
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCc---ccHHHHHHHHHHHccC-CCCCCCcceeeeecCCceEEEEEecC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY---PRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKEERLLVYDYFP 414 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~ 414 (457)
.+.||+|+||.||+|.. .+++.||+|+++.... ...+.+.+|+.++.++ +|||||++++++...+..|+||||++
T Consensus 14 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~ 93 (345)
T 3a8x_A 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 93 (345)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCC
Confidence 46899999999999994 5689999999976532 2345688999999987 89999999999999999999999999
Q ss_pred CCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 415 NGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 415 ~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+|+|.+++............ ..+.|++.++.++
T Consensus 94 gg~L~~~l~~~~~l~~~~~~---~~~~qi~~aL~~L 126 (345)
T 3a8x_A 94 GGDLMFHMQRQRKLPEEHAR---FYSAEISLALNYL 126 (345)
T ss_dssp SCBHHHHHHHHSSCCHHHHH---HHHHHHHHHHHHH
T ss_pred CCcHHHHHHHcCCCCHHHHH---HHHHHHHHHHHHH
Confidence 99999999875422222222 2334555555543
No 208
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.38 E-value=1.4e-12 Score=127.11 Aligned_cols=108 Identities=22% Similarity=0.297 Sum_probs=84.4
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccC---cccHHHHHHHHHHHccC-CCCCCCcceeeeecCCceEEEEEecC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDAR---YPRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKEERLLVYDYFP 414 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~ 414 (457)
.+.||+|+||.||+|.. .+|+.||||+++... ....+.+..|..++..+ +||||+++++++...+..|+||||++
T Consensus 22 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 101 (345)
T 1xjd_A 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN 101 (345)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCC
Confidence 46899999999999994 579999999997642 23456688899999876 89999999999999999999999999
Q ss_pred CCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 415 NGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 415 ~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+|+|.++++....... ......+.|++.++.++
T Consensus 102 gg~L~~~l~~~~~~~~---~~~~~~~~qi~~aL~~L 134 (345)
T 1xjd_A 102 GGDLMYHIQSCHKFDL---SRATFYAAEIILGLQFL 134 (345)
T ss_dssp TCBHHHHHHHHSSCCH---HHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHcCCCCH---HHHHHHHHHHHHHHHHH
Confidence 9999999987542222 22223344566655554
No 209
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.37 E-value=1.9e-12 Score=124.90 Aligned_cols=108 Identities=16% Similarity=0.163 Sum_probs=84.2
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCC----ceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKE----ERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|... ++.||||++.... .....+..|+.++.+++|||||++++++.... ..++||||+++
T Consensus 29 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~ 106 (322)
T 3soc_A 29 LEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEK 106 (322)
T ss_dssp EEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence 468999999999999875 8999999997643 33445667999999999999999999998754 36999999999
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcCcc
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMSPK 453 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~~~ 453 (457)
|+|.++++... . ......+.+.|++.++++.+..
T Consensus 107 g~L~~~l~~~~-~---~~~~~~~i~~qi~~al~~LH~~ 140 (322)
T 3soc_A 107 GSLSDFLKANV-V---SWNELCHIAETMARGLAYLHED 140 (322)
T ss_dssp CBHHHHHHHCC-B---CHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCHHHHHHhcC-C---CHHHHHHHHHHHHHHHHHHHhh
Confidence 99999998753 1 1222233556777777776643
No 210
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.37 E-value=1.9e-12 Score=135.89 Aligned_cols=107 Identities=25% Similarity=0.312 Sum_probs=83.9
Q ss_pred ccccCCccEEEEEEec---CCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCc
Q 012745 342 TLGRGTIGSTYKAVLE---SGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGS 417 (457)
Q Consensus 342 ~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~Gs 417 (457)
.||+|+||.||+|... ++..||||+++.... ...++|.+|+.+|.+++|||||+++++|.. +..++|||||++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6999999999999853 467899999987543 456789999999999999999999999976 56899999999999
Q ss_pred hHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 418 LFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 418 L~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
|.++++.... ........+.+.+++.++++++
T Consensus 422 L~~~l~~~~~--~l~~~~~~~i~~qi~~~L~~LH 453 (613)
T 2ozo_A 422 LHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLE 453 (613)
T ss_dssp HHHHHTTCTT--TSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999986531 1122333345566777766643
No 211
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.37 E-value=3.1e-12 Score=124.22 Aligned_cols=86 Identities=22% Similarity=0.434 Sum_probs=75.7
Q ss_pred hcccccCCccEEEEEEec------CCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEe
Q 012745 340 AETLGRGTIGSTYKAVLE------SGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDY 412 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 412 (457)
.+.||+|+||.||+|... +++.||||.++.... ...+.|.+|+.++.+++||||++++++|...+..++||||
T Consensus 52 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 131 (343)
T 1luf_A 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEY 131 (343)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEec
Confidence 467999999999999853 358999999986543 3356799999999999999999999999999999999999
Q ss_pred cCCCchHHHhhhC
Q 012745 413 FPNGSLFSLIHGT 425 (457)
Q Consensus 413 ~~~GsL~~~l~~~ 425 (457)
+++|+|.++++..
T Consensus 132 ~~~~~L~~~l~~~ 144 (343)
T 1luf_A 132 MAYGDLNEFLRSM 144 (343)
T ss_dssp CTTCBHHHHHHHT
T ss_pred CCCCcHHHHHHHh
Confidence 9999999999874
No 212
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.37 E-value=1.4e-12 Score=127.40 Aligned_cols=106 Identities=25% Similarity=0.356 Sum_probs=77.4
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCch
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
.+.||+|+||.||+|.. .+++.||||+++... ..+.+.+|++++.+++||||++++++|...+..++||||+++|+|
T Consensus 58 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 135 (349)
T 2w4o_A 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGEL 135 (349)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCH
Confidence 46899999999999995 568899999997643 346688999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 419 FSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 419 ~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
.+++...........- +.+.|++.+++++
T Consensus 136 ~~~l~~~~~~~~~~~~---~i~~qi~~~L~~L 164 (349)
T 2w4o_A 136 FDRIVEKGYYSERDAA---DAVKQILEAVAYL 164 (349)
T ss_dssp HHHHTTCSSCCHHHHH---HHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCHHHHH---HHHHHHHHHHHHH
Confidence 9999875422222222 2334555555543
No 213
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.37 E-value=2.8e-12 Score=120.97 Aligned_cols=108 Identities=25% Similarity=0.416 Sum_probs=84.6
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCc------ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEe
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY------PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDY 412 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 412 (457)
.+.||+|+||.||+|.. .+++.||||.++.... ...+.|.+|+.++.+++||||+++++++...+..++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 89 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILEL 89 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEee
Confidence 46899999999999995 5799999999875432 2367899999999999999999999999999999999999
Q ss_pred cCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 413 FPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 413 ~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+++|+|.+++........... .+.+.+++.+++++
T Consensus 90 ~~~~~L~~~l~~~~~~~~~~~---~~~~~~i~~~l~~l 124 (283)
T 3bhy_A 90 VSGGELFDFLAEKESLTEDEA---TQFLKQILDGVHYL 124 (283)
T ss_dssp CCSCBHHHHHHHHSSCCHHHH---HHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHhcCCCCHHHH---HHHHHHHHHHHHHH
Confidence 999999999986442222222 22334555555543
No 214
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.37 E-value=7.9e-13 Score=136.61 Aligned_cols=110 Identities=23% Similarity=0.327 Sum_probs=86.5
Q ss_pred HhcccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCch
Q 012745 339 SAETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 339 ~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
..+.||+|+||.||+|....+..||||+++... ...++|.+|+.+|++++|+|||+++++|.. +..++|||||++|+|
T Consensus 271 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL 348 (535)
T 2h8h_A 271 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 348 (535)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEH
T ss_pred hheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcH
Confidence 356899999999999998877889999998654 346789999999999999999999999876 678999999999999
Q ss_pred HHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 419 FSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 419 ~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
.++|+.... .........+.+.+++.+|++++
T Consensus 349 ~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~LH 380 (535)
T 2h8h_A 349 LDFLKGETG-KYLRLPQLVDMAAQIASGMAYVE 380 (535)
T ss_dssp HHHHSHHHH-TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 999985321 11122333345566777666643
No 215
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.37 E-value=2.4e-12 Score=124.07 Aligned_cols=108 Identities=20% Similarity=0.320 Sum_probs=85.1
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc------ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEe
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY------PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDY 412 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 412 (457)
.+.||+|+||.||+|. ..+|+.||||.+..... ...+.+.+|+.++.+++||||+++++++...+..++||||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 96 (321)
T 2a2a_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILEL 96 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEc
Confidence 5789999999999999 45799999999976432 1367899999999999999999999999999999999999
Q ss_pred cCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 413 FPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 413 ~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+++|+|.+++........ ....+.+.+++.+++++
T Consensus 97 ~~~~~L~~~l~~~~~~~~---~~~~~i~~qi~~aL~~l 131 (321)
T 2a2a_A 97 VSGGELFDFLAQKESLSE---EEATSFIKQILDGVNYL 131 (321)
T ss_dssp CCSCBHHHHHHTCSCEEH---HHHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHhcCCCCH---HHHHHHHHHHHHHHHHH
Confidence 999999999986542221 22222334555555543
No 216
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.37 E-value=9.3e-13 Score=129.00 Aligned_cols=108 Identities=19% Similarity=0.234 Sum_probs=86.0
Q ss_pred cccccCCccEEEEEEe-cCCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCch
Q 012745 341 ETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
+.||+|+||.||+|.. .+++.||+|++..... ...+.+.+|+.++.+++||||+++++++...+..++||||+++|+|
T Consensus 39 ~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 118 (360)
T 3eqc_A 39 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL 118 (360)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCH
Confidence 5799999999999994 5799999999976532 3356799999999999999999999999999999999999999999
Q ss_pred HHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 419 FSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 419 ~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
.++++....... ....+.+.+++.++++.+
T Consensus 119 ~~~l~~~~~~~~---~~~~~i~~~i~~~l~~lh 148 (360)
T 3eqc_A 119 DQVLKKAGRIPE---QILGKVSIAVIKGLTYLR 148 (360)
T ss_dssp HHHHHHHSSCCH---HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCH---HHHHHHHHHHHHHHHHHH
Confidence 999987542222 222233456666665554
No 217
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.36 E-value=2.4e-12 Score=127.54 Aligned_cols=110 Identities=22% Similarity=0.299 Sum_probs=84.9
Q ss_pred hcccccC--CccEEEEEEe-cCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecC
Q 012745 340 AETLGRG--TIGSTYKAVL-ESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFP 414 (457)
Q Consensus 340 ~~~lg~G--~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 414 (457)
.+.||+| +||.||+|.. .+|+.||||+++.... ...+.+.+|+.++++++|||||+++++|...+..++|||||+
T Consensus 30 ~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 109 (389)
T 3gni_B 30 LTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 109 (389)
T ss_dssp EEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred EecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccC
Confidence 4689999 9999999994 5799999999976532 234668889999999999999999999999999999999999
Q ss_pred CCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 415 NGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 415 ~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+|+|.+++....... .......+.+.|++.+++++
T Consensus 110 ~~~L~~~l~~~~~~~-~~~~~~~~~~~qi~~~l~~L 144 (389)
T 3gni_B 110 YGSAKDLICTHFMDG-MNELAIAYILQGVLKALDYI 144 (389)
T ss_dssp TCBHHHHHHHTCTTC-CCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHhhhcccC-CCHHHHHHHHHHHHHHHHHH
Confidence 999999998752111 11122223344565555553
No 218
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.36 E-value=2.6e-12 Score=123.00 Aligned_cols=107 Identities=25% Similarity=0.353 Sum_probs=81.2
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCchH
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLF 419 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL~ 419 (457)
.+.||+|+||.||+|... ++.||||.+... ...+.|.+|+.++++++||||+++++++. +..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~ 87 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLY 87 (307)
T ss_dssp EEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHH
T ss_pred eeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHH
Confidence 468999999999999875 789999999753 34578999999999999999999999886 4579999999999999
Q ss_pred HHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 420 SLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 420 ~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
++++..............+.+.+++.+++..+
T Consensus 88 ~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH 119 (307)
T 2eva_A 88 NVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 119 (307)
T ss_dssp HHHHCSSSEECCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccCCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 99987542111111222233345666555544
No 219
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.36 E-value=2.5e-12 Score=131.66 Aligned_cols=108 Identities=19% Similarity=0.319 Sum_probs=81.0
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNG 416 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~G 416 (457)
.+.||+|+||.||+|. ..++..||||++..... .....+.+|+.+++.++|||||+++++|...+..++||||+++|
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 121 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGG 121 (494)
T ss_dssp EEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence 4789999999999999 45789999999976532 34567999999999999999999999999999999999999999
Q ss_pred chHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 417 SLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 417 sL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+|.+++............... .|++.+++++
T Consensus 122 ~L~~~~~~~~~~~~~~~~~i~---~qi~~~l~~l 152 (494)
T 3lij_A 122 ELFDEIIHRMKFNEVDAAVII---KQVLSGVTYL 152 (494)
T ss_dssp BHHHHHHHHSSCCHHHHHHHH---HHHHHHHHHH
T ss_pred cHHHHHHHcCCCCHHHHHHHH---HHHHHHHHHH
Confidence 999998765432222222233 4555555443
No 220
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.36 E-value=3.7e-12 Score=120.52 Aligned_cols=85 Identities=22% Similarity=0.409 Sum_probs=76.2
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCc
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGS 417 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~Gs 417 (457)
.+.||+|+||.||++. ..++..||+|.+..... ...+.+.+|++++.+++||||++++++|...+..++||||+++|+
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 106 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGE 106 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCB
T ss_pred cceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCc
Confidence 5789999999999999 46689999999976543 446789999999999999999999999999999999999999999
Q ss_pred hHHHhhh
Q 012745 418 LFSLIHG 424 (457)
Q Consensus 418 L~~~l~~ 424 (457)
|.+++..
T Consensus 107 L~~~l~~ 113 (285)
T 3is5_A 107 LLERIVS 113 (285)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999964
No 221
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.36 E-value=1.8e-12 Score=128.57 Aligned_cols=108 Identities=16% Similarity=0.232 Sum_probs=83.5
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc---ccHHHHHHHHHHHccC-CCCCCCcceeeeecCCceEEEEEecC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY---PRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKEERLLVYDYFP 414 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~ 414 (457)
.++||+|+||.||+|. ..+++.||||++++... ...+.+..|..++.++ +|||||+++++|...+..++||||++
T Consensus 57 ~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~ 136 (396)
T 4dc2_A 57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 136 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCC
Confidence 4689999999999999 45689999999986532 2234578999999887 89999999999999999999999999
Q ss_pred CCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 415 NGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 415 ~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+|+|.++++..+......... .+.|++.+++++
T Consensus 137 gg~L~~~l~~~~~l~~~~~~~---~~~qi~~aL~~L 169 (396)
T 4dc2_A 137 GGDLMFHMQRQRKLPEEHARF---YSAEISLALNYL 169 (396)
T ss_dssp TCBHHHHHHHHSSCCHHHHHH---HHHHHHHHHHHH
T ss_pred CCcHHHHHHHcCCCCHHHHHH---HHHHHHHHHHHH
Confidence 999999998754333222333 334555555543
No 222
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.35 E-value=3.2e-12 Score=121.72 Aligned_cols=86 Identities=24% Similarity=0.430 Sum_probs=72.0
Q ss_pred hcccccCCccEEEEEEe-----cCCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecC--CceEEEEE
Q 012745 340 AETLGRGTIGSTYKAVL-----ESGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAK--EERLLVYD 411 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv~e 411 (457)
.+.||+|+||.||+|.+ .+++.||||+++.... ...+.+.+|+.++.+++||||+++++++... ...++|||
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 105 (302)
T 4e5w_A 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIME 105 (302)
T ss_dssp EEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEE
T ss_pred hhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEE
Confidence 46899999999999983 4689999999975533 3457899999999999999999999999876 56899999
Q ss_pred ecCCCchHHHhhhC
Q 012745 412 YFPNGSLFSLIHGT 425 (457)
Q Consensus 412 y~~~GsL~~~l~~~ 425 (457)
|+++|+|.++++..
T Consensus 106 ~~~~~~L~~~l~~~ 119 (302)
T 4e5w_A 106 FLPSGSLKEYLPKN 119 (302)
T ss_dssp CCTTCBHHHHHHHH
T ss_pred eCCCCcHHHHHHhc
Confidence 99999999999654
No 223
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.35 E-value=3.6e-12 Score=120.53 Aligned_cols=85 Identities=26% Similarity=0.509 Sum_probs=76.3
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCch
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
.+.||+|+||.||+|.. .++..||+|.+.... ...+.|.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 96 (288)
T 3kfa_A 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 96 (288)
T ss_dssp EEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEH
T ss_pred EeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcH
Confidence 46899999999999994 558999999997644 4567899999999999999999999999999999999999999999
Q ss_pred HHHhhhC
Q 012745 419 FSLIHGT 425 (457)
Q Consensus 419 ~~~l~~~ 425 (457)
.++++..
T Consensus 97 ~~~~~~~ 103 (288)
T 3kfa_A 97 LDYLREC 103 (288)
T ss_dssp HHHHHHC
T ss_pred HHHHHhc
Confidence 9999874
No 224
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.35 E-value=3.9e-12 Score=121.84 Aligned_cols=87 Identities=26% Similarity=0.421 Sum_probs=76.0
Q ss_pred hcccccCCccEEEEEEe------cCCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEe
Q 012745 340 AETLGRGTIGSTYKAVL------ESGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDY 412 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 412 (457)
.+.||+|+||.||+|.. .+++.||||.++.... ...+.+.+|+.++.+++||||+++++++...+..++||||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 107 (314)
T 2ivs_A 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEY 107 (314)
T ss_dssp EEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEee
Confidence 46899999999999984 3458999999986543 3456789999999999999999999999999999999999
Q ss_pred cCCCchHHHhhhCC
Q 012745 413 FPNGSLFSLIHGTC 426 (457)
Q Consensus 413 ~~~GsL~~~l~~~~ 426 (457)
+++|+|.++++...
T Consensus 108 ~~~~~L~~~l~~~~ 121 (314)
T 2ivs_A 108 AKYGSLRGFLRESR 121 (314)
T ss_dssp CTTCBHHHHHHHTT
T ss_pred cCCCCHHHHHHHHh
Confidence 99999999998754
No 225
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.35 E-value=1.2e-13 Score=135.74 Aligned_cols=149 Identities=17% Similarity=0.148 Sum_probs=116.8
Q ss_pred EEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-----CCcCCC-CCcEEEccCCccccCCCccCCCC-----C
Q 012745 53 KLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-----NLLGLV-NLKSLYLNDNNFSGKFPGSLSSL-----H 121 (457)
Q Consensus 53 ~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-----~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~ 121 (457)
.++|++|+++|.+|. .+...++|+.|+|++|.|++..+ .|.+++ +|++|+|++|+|++..+..|..+ +
T Consensus 2 ~~~ls~n~~~~~~~~-~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVEE-FTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHHH-HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred ccccccccchHHHHH-HHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 478999999977654 66666779999999999997764 466788 99999999999998777777765 9
Q ss_pred CCCEEEeeccccCCCCcccccC----C-CccceeecccccccCCCCCC------C-CCCCcEEEeecCcceecCCC----
Q 012745 122 RLKIIVLANNQISGPIPESLSN----L-KRLYMLYLQDNKFTGPIPPF------N-QTNLRFFNVSNNDLSGQIPV---- 185 (457)
Q Consensus 122 ~L~~L~Ls~N~l~~~~p~~~~~----l-~~L~~L~l~~N~l~~~~~~~------~-~~~L~~L~l~~N~l~~~~p~---- 185 (457)
+|++|+|++|.+++..+..+.. + ++|++|+|++|+|++..+.. . .++|+.|+|++|.|+...+.
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 9999999999999777765444 4 89999999999998765432 2 36999999999999954331
Q ss_pred -chhh-hccCccccccCcC
Q 012745 186 -TPAL-VRFNASSFLLNIN 202 (457)
Q Consensus 186 -~~~l-~~l~~~~~~~n~~ 202 (457)
...+ .++..+.+.+|..
T Consensus 161 ~l~~~~~~L~~L~Ls~n~l 179 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGNNL 179 (362)
T ss_dssp HHHTSCTTCCEEECTTSCG
T ss_pred HHhcCCccccEeeecCCCC
Confidence 0111 2677777777753
No 226
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.35 E-value=2.9e-12 Score=122.92 Aligned_cols=108 Identities=24% Similarity=0.331 Sum_probs=81.5
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCc
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGS 417 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~Gs 417 (457)
.+.||+|+||.||+|...+|+.||||+++.... ...+.+.+|++++++++|||||++++++...+..++||||++ |+
T Consensus 26 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~ 104 (311)
T 3niz_A 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-KD 104 (311)
T ss_dssp EEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS-EE
T ss_pred hhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC-CC
Confidence 367999999999999987899999999975432 234678899999999999999999999999999999999999 58
Q ss_pred hHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 418 LFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 418 L~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|.+++...... .........+.|++.+++++
T Consensus 105 l~~~~~~~~~~--~~~~~~~~~~~qi~~~l~~L 135 (311)
T 3niz_A 105 LKKVLDENKTG--LQDSQIKIYLYQLLRGVAHC 135 (311)
T ss_dssp HHHHHHTCTTC--CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCC--CCHHHHHHHHHHHHHHHHHH
Confidence 99988765421 11112222334565555553
No 227
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.35 E-value=4.4e-12 Score=120.79 Aligned_cols=86 Identities=23% Similarity=0.449 Sum_probs=74.1
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCch
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
.+.||+|+||.||+|.. .+++.||+|.+........+.|.+|+.++.+++||||+++++++...+..++||||+++|+|
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l 103 (302)
T 2j7t_A 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV 103 (302)
T ss_dssp EEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEH
T ss_pred cceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcH
Confidence 36799999999999995 56899999999876556678899999999999999999999999999999999999999999
Q ss_pred HHHhhhC
Q 012745 419 FSLIHGT 425 (457)
Q Consensus 419 ~~~l~~~ 425 (457)
.+++...
T Consensus 104 ~~~~~~~ 110 (302)
T 2j7t_A 104 DAIMLEL 110 (302)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9998763
No 228
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.35 E-value=3.4e-12 Score=119.87 Aligned_cols=108 Identities=24% Similarity=0.278 Sum_probs=84.6
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCc
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGS 417 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~Gs 417 (457)
.+.||+|+||.||+|.. .+++.||||.+..... ...+.+.+|+.++..++||||+++++++...+..++||||+++|+
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 91 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCc
Confidence 46899999999999994 5799999999975432 345778999999999999999999999999999999999999999
Q ss_pred hHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 418 LFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 418 L~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|.+++........... .+.+.+++.+++++
T Consensus 92 L~~~l~~~~~~~~~~~---~~~~~~i~~~l~~l 121 (276)
T 2yex_A 92 LFDRIEPDIGMPEPDA---QRFFHQLMAGVVYL 121 (276)
T ss_dssp GGGGSBTTTBCCHHHH---HHHHHHHHHHHHHH
T ss_pred HHHHHhhccCCCHHHH---HHHHHHHHHHHHHH
Confidence 9999986532222222 22334555555543
No 229
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.35 E-value=1.6e-12 Score=124.66 Aligned_cols=108 Identities=20% Similarity=0.193 Sum_probs=82.3
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcc---cHHHHHHHHHHHccCCCCCCCcceeeeecCCc----eEEEEE
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYP---RLEEFRRHMDILGRLRHPNLVPLRAYFQAKEE----RLLVYD 411 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----~~lv~e 411 (457)
.+.||+|+||.||+|. ..+++.||||+++..... ..+.|.+|+.++.+++||||+++++++..... .|+|||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e 96 (311)
T 3ork_A 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 96 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEe
Confidence 4689999999999999 577999999999765332 24578899999999999999999999876544 399999
Q ss_pred ecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 412 YFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 412 y~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|+++|+|.++++........ ...+.+.|++.+++++
T Consensus 97 ~~~g~~L~~~l~~~~~~~~~---~~~~~~~qi~~~l~~l 132 (311)
T 3ork_A 97 YVDGVTLRDIVHTEGPMTPK---RAIEVIADACQALNFS 132 (311)
T ss_dssp CCCEEEHHHHHHHHCSCCHH---HHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHhcCCCCHH---HHHHHHHHHHHHHHHH
Confidence 99999999999865422222 2222334555555543
No 230
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.35 E-value=2.2e-12 Score=131.02 Aligned_cols=109 Identities=25% Similarity=0.345 Sum_probs=85.9
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCc---ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY---PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|+.+++.++||||+++++++...+..++||||+++
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~g 100 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSG 100 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 46899999999999994 5799999999975421 2356789999999999999999999999999999999999999
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
|+|.+++........ ....+.+.|++.++++++
T Consensus 101 g~L~~~l~~~~~l~~---~~~~~i~~qi~~aL~~LH 133 (476)
T 2y94_A 101 GELFDYICKNGRLDE---KESRRLFQQILSGVDYCH 133 (476)
T ss_dssp EEHHHHTTSSSSCCH---HHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHhcCCCCH---HHHHHHHHHHHHHHHHHH
Confidence 999999986542222 222233456666665543
No 231
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.35 E-value=6.2e-13 Score=134.32 Aligned_cols=109 Identities=21% Similarity=0.254 Sum_probs=78.4
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccC---cccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDAR---YPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|. ..+|+.||||+++... ......+.+|+.++..++||||++++++|...+..++||||+++
T Consensus 153 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~ 232 (446)
T 4ejn_A 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 232 (446)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSS
T ss_pred eEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCC
Confidence 4689999999999999 5679999999997542 23345688999999999999999999999999999999999999
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
|+|.+++........ ......+.|++.+++++|
T Consensus 233 ~~L~~~l~~~~~~~~---~~~~~~~~qi~~aL~~LH 265 (446)
T 4ejn_A 233 GELFFHLSRERVFSE---DRARFYGAEIVSALDYLH 265 (446)
T ss_dssp CBHHHHHHHHSCCCH---HHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHhcCCCCH---HHHHHHHHHHHHHHHHHh
Confidence 999999987542222 222233456666666655
No 232
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.34 E-value=4.4e-12 Score=129.41 Aligned_cols=108 Identities=22% Similarity=0.329 Sum_probs=85.6
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccC---cccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDAR---YPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|. ..+|+.||||++.... ....+.+.+|+.++++++|||||+++++|...+..++||||+++
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 110 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 110 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence 4789999999999999 4579999999996543 23467899999999999999999999999999999999999999
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|+|.+++............. .+.|++.+++++
T Consensus 111 ~~L~~~~~~~~~~~~~~~~~---i~~qi~~~l~~l 142 (484)
T 3nyv_A 111 GELFDEIISRKRFSEVDAAR---IIRQVLSGITYM 142 (484)
T ss_dssp CBHHHHHHTCSCCBHHHHHH---HHHHHHHHHHHH
T ss_pred CCHHHHHHhcCCCCHHHHHH---HHHHHHHHHHHH
Confidence 99999998754332222222 334555555543
No 233
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.34 E-value=3.7e-12 Score=130.71 Aligned_cols=108 Identities=20% Similarity=0.323 Sum_probs=81.3
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc-------------ccHHHHHHHHHHHccCCCCCCCcceeeeecCCc
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY-------------PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEE 405 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~-------------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 405 (457)
.+.||+|+||.||+|. ..+++.||||++..... ...+.+.+|+.++.+++|||||+++++|...+.
T Consensus 41 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 120 (504)
T 3q5i_A 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKY 120 (504)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred EeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 4689999999999999 46689999999975431 224678999999999999999999999999999
Q ss_pred eEEEEEecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 406 RLLVYDYFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 406 ~~lv~ey~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
.++||||+++|+|.+++............. .+.|++.+++++
T Consensus 121 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~---i~~qi~~~l~~l 162 (504)
T 3q5i_A 121 FYLVTEFYEGGELFEQIINRHKFDECDAAN---IMKQILSGICYL 162 (504)
T ss_dssp EEEEEECCTTCBHHHHHHHHSCCCHHHHHH---HHHHHHHHHHHH
T ss_pred EEEEEecCCCCcHHHHHHHcCCCCHHHHHH---HHHHHHHHHHHH
Confidence 999999999999999998654322222222 334555555543
No 234
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.34 E-value=2.6e-12 Score=131.20 Aligned_cols=110 Identities=20% Similarity=0.286 Sum_probs=85.5
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccC--cccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDAR--YPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNG 416 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~G 416 (457)
.+.||+|+||.||+|. ..+++.||||++.... ......+.+|++++++++|||||++++++......++||||+++|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~ 106 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCC
Confidence 5789999999999999 4579999999996532 234678999999999999999999999999999999999999999
Q ss_pred chHHHhhhCCCCCCchhhHHHHHHHHHHHHHHh
Q 012745 417 SLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQ 449 (457)
Q Consensus 417 sL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~ 449 (457)
+|.+++...............+++++.+..++.
T Consensus 107 ~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~ 139 (486)
T 3mwu_A 107 ELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139 (486)
T ss_dssp BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999765433333333333333444444443
No 235
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.34 E-value=4.3e-12 Score=120.26 Aligned_cols=109 Identities=20% Similarity=0.355 Sum_probs=82.0
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeec----CCceEEEEEe
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQA----KEERLLVYDY 412 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lv~ey 412 (457)
.+.||+|+||.||+|. ..++..||+|.+..... ...+.+.+|+.++.+++||||++++++|.. ....++||||
T Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~ 110 (290)
T 1t4h_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEEC
T ss_pred eeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEe
Confidence 3579999999999998 46688999999976532 345678999999999999999999998865 3457999999
Q ss_pred cCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 413 FPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 413 ~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
+++|+|.++++......... ..+.+.+++.++++++
T Consensus 111 ~~~~~L~~~l~~~~~~~~~~---~~~~~~qi~~~l~~lH 146 (290)
T 1t4h_A 111 MTSGTLKTYLKRFKVMKIKV---LRSWCRQILKGLQFLH 146 (290)
T ss_dssp CCSCBHHHHHHHHSSCCHHH---HHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHccCCCHHH---HHHHHHHHHHHHHHHH
Confidence 99999999998743222222 2223345555555443
No 236
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.34 E-value=5.7e-12 Score=120.73 Aligned_cols=87 Identities=20% Similarity=0.322 Sum_probs=76.5
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCcc---cHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARYP---RLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~---~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|.. .+++.||||++...... ..+.+.+|+.++.+++||||+++++++...+..++||||+++
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 118 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLING 118 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCC
T ss_pred EEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCC
Confidence 46899999999999994 57899999999765332 246789999999999999999999999999999999999999
Q ss_pred CchHHHhhhCC
Q 012745 416 GSLFSLIHGTC 426 (457)
Q Consensus 416 GsL~~~l~~~~ 426 (457)
|+|.++++...
T Consensus 119 ~~L~~~l~~~~ 129 (309)
T 2h34_A 119 VDLAAMLRRQG 129 (309)
T ss_dssp EEHHHHHHHHC
T ss_pred CCHHHHHHhcC
Confidence 99999998753
No 237
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.34 E-value=4.3e-12 Score=121.45 Aligned_cols=107 Identities=23% Similarity=0.339 Sum_probs=83.4
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNG 416 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~G 416 (457)
.+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|++++.+++||||+++++++...+..++||||++++
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (311)
T 4agu_A 8 IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHT 87 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred eeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCc
Confidence 36799999999999994 5699999999866543 22466889999999999999999999999999999999999999
Q ss_pred chHHHhhhCCCCCCchhhHHHHHHHHHHHHHHh
Q 012745 417 SLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQ 449 (457)
Q Consensus 417 sL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~ 449 (457)
+|.++++............ .+.+++.++++
T Consensus 88 ~l~~~~~~~~~~~~~~~~~---i~~~l~~~l~~ 117 (311)
T 4agu_A 88 VLHELDRYQRGVPEHLVKS---ITWQTLQAVNF 117 (311)
T ss_dssp HHHHHHHTSSCCCHHHHHH---HHHHHHHHHHH
T ss_pred hHHHHHhhhcCCCHHHHHH---HHHHHHHHHHH
Confidence 9999988654322222222 33455555544
No 238
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.34 E-value=4.1e-12 Score=120.63 Aligned_cols=108 Identities=14% Similarity=0.232 Sum_probs=83.9
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCc---ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY---PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||++.. .+++.||+|.+..... ...+.+.+|+.+++.++|+||+++++++...+..++||||+++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 99 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR 99 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCC
Confidence 46899999999999994 5688999999875432 3356788999999999999999999999999999999999999
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|+|.+++........... .+.+.+++.+++++
T Consensus 100 ~~L~~~~~~~~~~~~~~~---~~i~~qi~~~l~~l 131 (294)
T 2rku_A 100 RSLLELHKRRKALTEPEA---RYYLRQIVLGCQYL 131 (294)
T ss_dssp CBHHHHHHHHCSCCHHHH---HHHHHHHHHHHHHH
T ss_pred CCHHHHHHhcCCCCHHHH---HHHHHHHHHHHHHH
Confidence 999999876432222222 22334555555543
No 239
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.34 E-value=4.5e-12 Score=122.37 Aligned_cols=87 Identities=29% Similarity=0.515 Sum_probs=75.1
Q ss_pred hcccccCCccEEEEEEe-----cCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCC--ceEEEEEe
Q 012745 340 AETLGRGTIGSTYKAVL-----ESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKE--ERLLVYDY 412 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lv~ey 412 (457)
.+.||+|+||.||+|.. .+++.||||++........+.|.+|+.++.+++||||+++++++...+ ..++||||
T Consensus 46 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 125 (326)
T 2w1i_A 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 125 (326)
T ss_dssp EEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECC
T ss_pred eeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEEC
Confidence 46899999999999983 468999999998765555678999999999999999999999987644 67999999
Q ss_pred cCCCchHHHhhhCC
Q 012745 413 FPNGSLFSLIHGTC 426 (457)
Q Consensus 413 ~~~GsL~~~l~~~~ 426 (457)
+++|+|.+++....
T Consensus 126 ~~~~~L~~~l~~~~ 139 (326)
T 2w1i_A 126 LPYGSLRDYLQKHK 139 (326)
T ss_dssp CTTCBHHHHHHHST
T ss_pred CCCCCHHHHHHhcc
Confidence 99999999998754
No 240
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.34 E-value=5.7e-12 Score=119.14 Aligned_cols=108 Identities=22% Similarity=0.359 Sum_probs=80.9
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCccc-------HHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEE
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARYPR-------LEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYD 411 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~-------~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 411 (457)
.+.||+|+||.||+|.. .+++.||||++....... .+.|.+|+.++.+++||||+++++++.... ++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e 101 (287)
T 4f0f_A 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVME 101 (287)
T ss_dssp EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEE
T ss_pred hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEE
Confidence 46799999999999994 679999999997543311 167899999999999999999999986554 79999
Q ss_pred ecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 412 YFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 412 y~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
|+++|+|.+++...... .......+.+.+++.++++.+
T Consensus 102 ~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~l~~~l~~lH 139 (287)
T 4f0f_A 102 FVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIALGIEYMQ 139 (287)
T ss_dssp CCTTCBHHHHHHCTTSC--CCHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCHHHHHhcccCC--ccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999765321 111222234456666655543
No 241
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.34 E-value=3.7e-12 Score=120.21 Aligned_cols=87 Identities=26% Similarity=0.458 Sum_probs=76.1
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNG 416 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~G 416 (457)
.+.||+|+||.||+|. ..+++.||+|++..... ...+.+.+|+.++.+++||||+++++++...+..++||||+++|
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 90 (284)
T 3kk8_A 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 90 (284)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred hhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCC
Confidence 3679999999999999 46689999999976532 33467889999999999999999999999999999999999999
Q ss_pred chHHHhhhCC
Q 012745 417 SLFSLIHGTC 426 (457)
Q Consensus 417 sL~~~l~~~~ 426 (457)
+|.+++....
T Consensus 91 ~l~~~~~~~~ 100 (284)
T 3kk8_A 91 ELFEDIVARE 100 (284)
T ss_dssp BHHHHHHHHS
T ss_pred CHHHHHHhcC
Confidence 9999988754
No 242
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.34 E-value=3.7e-12 Score=123.57 Aligned_cols=108 Identities=14% Similarity=0.211 Sum_probs=84.2
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCc---ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY---PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||++.. .+++.||+|.+..... ...+.+.+|+.++..++|+||+++++++...+..++||||+++
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 125 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR 125 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCC
Confidence 46899999999999994 5688999999875432 3356789999999999999999999999999999999999999
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
++|.+++...........-. .+.|++.+++++
T Consensus 126 ~~L~~~~~~~~~l~~~~~~~---i~~qi~~aL~~L 157 (335)
T 2owb_A 126 RSLLELHKRRKALTEPEARY---YLRQIVLGCQYL 157 (335)
T ss_dssp CBHHHHHHHHCSCCHHHHHH---HHHHHHHHHHHH
T ss_pred CCHHHHHhccCCCCHHHHHH---HHHHHHHHHHHH
Confidence 99999988654222222222 334555555443
No 243
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.33 E-value=3.2e-12 Score=123.41 Aligned_cols=109 Identities=23% Similarity=0.344 Sum_probs=83.5
Q ss_pred hcccccCCccEEEEEEe-----cCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeec--CCceEEEEEe
Q 012745 340 AETLGRGTIGSTYKAVL-----ESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQA--KEERLLVYDY 412 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lv~ey 412 (457)
.+.||+|+||.||+|.. .+++.||||++........+.|.+|++++.+++|+||+++++++.. ....++||||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 107 (327)
T 3lxl_A 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEY 107 (327)
T ss_dssp EEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEEC
T ss_pred hhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEee
Confidence 46899999999999983 4688999999987665556779999999999999999999998874 4568899999
Q ss_pred cCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 413 FPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 413 ~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+++|+|.+++...... .......+.+.+++.+++++
T Consensus 108 ~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~al~~l 143 (327)
T 3lxl_A 108 LPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGMEYL 143 (327)
T ss_dssp CTTCBHHHHHHHHGGG--CCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHH
Confidence 9999999999864311 11122222334565555553
No 244
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.33 E-value=5.1e-12 Score=119.57 Aligned_cols=107 Identities=23% Similarity=0.279 Sum_probs=80.8
Q ss_pred cccccCCccEEEEEEe---cCCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCC
Q 012745 341 ETLGRGTIGSTYKAVL---ESGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNG 416 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~~---~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~G 416 (457)
+.||+|+||.||+|.. .++..||||.++.... ...+.+.+|++++.+++||||+++++++ ..+..++||||+++|
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGG 94 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCC
Confidence 4799999999999984 3578899999987543 3456799999999999999999999999 556789999999999
Q ss_pred chHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 417 SLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 417 sL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+|.+++...... .......+.+.+++.++++.
T Consensus 95 ~L~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~l 126 (287)
T 1u59_A 95 PLHKFLVGKREE--IPVSNVAELLHQVSMGMKYL 126 (287)
T ss_dssp EHHHHHTTCTTT--SCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHhCCcc--CCHHHHHHHHHHHHHHHHHH
Confidence 999999754311 11122222344555555543
No 245
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.33 E-value=3.2e-12 Score=119.77 Aligned_cols=85 Identities=27% Similarity=0.478 Sum_probs=70.4
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCc----ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARY----PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|... ++.||||+++.... ...+.+.+|++++..++||||++++++|...+..++||||+++
T Consensus 12 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 90 (271)
T 3dtc_A 12 EEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARG 90 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTT
T ss_pred eeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCC
Confidence 468999999999999975 88999999976532 2346789999999999999999999999999999999999999
Q ss_pred CchHHHhhhC
Q 012745 416 GSLFSLIHGT 425 (457)
Q Consensus 416 GsL~~~l~~~ 425 (457)
|+|.++++..
T Consensus 91 ~~L~~~~~~~ 100 (271)
T 3dtc_A 91 GPLNRVLSGK 100 (271)
T ss_dssp EEHHHHHTSS
T ss_pred CCHHHHhhcC
Confidence 9999999754
No 246
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.33 E-value=4e-12 Score=120.44 Aligned_cols=107 Identities=22% Similarity=0.273 Sum_probs=83.4
Q ss_pred cccccCCccEEEEEEecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCch
Q 012745 341 ETLGRGTIGSTYKAVLESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
+.||+|+||.||+|...+|+.||||++..... ...+.+.+|+.++++++||||+++++++...+..++||||++ |+|
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l 86 (288)
T 1ob3_A 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDL 86 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCS-EEH
T ss_pred hhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecC-CCH
Confidence 57999999999999987899999999975532 234678999999999999999999999999999999999999 599
Q ss_pred HHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 419 FSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 419 ~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
.+++......- ......+.+.|++.+++++
T Consensus 87 ~~~~~~~~~~~--~~~~~~~~~~qi~~~l~~l 116 (288)
T 1ob3_A 87 KKLLDVCEGGL--ESVTAKSFLLQLLNGIAYC 116 (288)
T ss_dssp HHHHHTSTTCC--CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcccCC--CHHHHHHHHHHHHHHHHHH
Confidence 99998653211 1112222344566665554
No 247
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.33 E-value=4.7e-12 Score=121.15 Aligned_cols=87 Identities=25% Similarity=0.393 Sum_probs=76.3
Q ss_pred hcccccCCccEEEEEEe------cCCcEEEEEEccccCc-ccHHHHHHHHHHHccC-CCCCCCcceeeeecCCceEEEEE
Q 012745 340 AETLGRGTIGSTYKAVL------ESGFIVTVKRLKDARY-PRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKEERLLVYD 411 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e 411 (457)
.+.||+|+||.||+|.. .+++.||||.++.... ...+.+.+|+.++.++ +||||++++++|...+..++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 107 (313)
T 1t46_A 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITE 107 (313)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEe
Confidence 47899999999999983 3468999999986543 3456799999999999 89999999999999999999999
Q ss_pred ecCCCchHHHhhhCC
Q 012745 412 YFPNGSLFSLIHGTC 426 (457)
Q Consensus 412 y~~~GsL~~~l~~~~ 426 (457)
|+++|+|.++++...
T Consensus 108 ~~~~~~L~~~l~~~~ 122 (313)
T 1t46_A 108 YCCYGDLLNFLRRKR 122 (313)
T ss_dssp CCTTEEHHHHHHHTT
T ss_pred cCCCCCHHHHHHhcc
Confidence 999999999998754
No 248
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.33 E-value=4.5e-12 Score=121.69 Aligned_cols=85 Identities=28% Similarity=0.433 Sum_probs=72.6
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeec----CCceEEEEEecC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQA----KEERLLVYDYFP 414 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lv~ey~~ 414 (457)
.+.||+|+||.||++. ..+++.||||++........+.+.+|+.++..++||||+++++++.. ....++||||++
T Consensus 34 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~ 113 (317)
T 2buj_A 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFK 113 (317)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCT
T ss_pred EEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCC
Confidence 4689999999999999 46799999999976554556789999999999999999999999873 346789999999
Q ss_pred CCchHHHhhh
Q 012745 415 NGSLFSLIHG 424 (457)
Q Consensus 415 ~GsL~~~l~~ 424 (457)
+|+|.+++..
T Consensus 114 ~~~L~~~l~~ 123 (317)
T 2buj_A 114 RGTLWNEIER 123 (317)
T ss_dssp TCBHHHHHHH
T ss_pred CCcHHHHHHH
Confidence 9999999986
No 249
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.33 E-value=5e-12 Score=118.78 Aligned_cols=87 Identities=26% Similarity=0.446 Sum_probs=76.2
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCc---ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY---PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|.. .+|+.||||.+..... ...+.+.+|+.++..++||||+++++++...+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 95 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCC
Confidence 46899999999999995 4799999999965421 3356789999999999999999999999999999999999999
Q ss_pred CchHHHhhhCC
Q 012745 416 GSLFSLIHGTC 426 (457)
Q Consensus 416 GsL~~~l~~~~ 426 (457)
|+|.+++....
T Consensus 96 ~~L~~~l~~~~ 106 (276)
T 2h6d_A 96 GELFDYICKHG 106 (276)
T ss_dssp CBHHHHHHHHC
T ss_pred CcHHHHHhccC
Confidence 99999998654
No 250
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.33 E-value=5.3e-12 Score=119.04 Aligned_cols=86 Identities=26% Similarity=0.355 Sum_probs=75.8
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCc--ccHHHHHHHHHHHccC-CCCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY--PRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|.. .+++.||||+++.... .....+.+|+..+.++ +||||+++++++...+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 95 (289)
T 1x8b_A 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNG 95 (289)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred hhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCC
Confidence 46899999999999995 5799999999976432 3456788999999999 899999999999999999999999999
Q ss_pred CchHHHhhhC
Q 012745 416 GSLFSLIHGT 425 (457)
Q Consensus 416 GsL~~~l~~~ 425 (457)
|+|.+++...
T Consensus 96 ~~L~~~l~~~ 105 (289)
T 1x8b_A 96 GSLADAISEN 105 (289)
T ss_dssp CBHHHHHHHH
T ss_pred CcHHHHHHhh
Confidence 9999999864
No 251
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.33 E-value=3.1e-12 Score=126.04 Aligned_cols=108 Identities=20% Similarity=0.323 Sum_probs=76.0
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc---ccHHHHHHHHHH-HccCCCCCCCcceeeeecCCceEEEEEecC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY---PRLEEFRRHMDI-LGRLRHPNLVPLRAYFQAKEERLLVYDYFP 414 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 414 (457)
.+.||+|+||.||+|. ..+++.||||++++... ...+.+..|..+ ++.++|||||+++++|...+..|+||||++
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 122 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 122 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCC
Confidence 4789999999999999 45689999999976542 223456777776 577899999999999999999999999999
Q ss_pred CCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 415 NGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 415 ~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+|+|.++++..+...+..... .+.+++.++.++
T Consensus 123 gg~L~~~l~~~~~~~~~~~~~---~~~qi~~aL~~L 155 (373)
T 2r5t_A 123 GGELFYHLQRERCFLEPRARF---YAAEIASALGYL 155 (373)
T ss_dssp SCBHHHHHHHHSSCCHHHHHH---HHHHHHHHHHHH
T ss_pred CCcHHHHHHhcCCCCHHHHHH---HHHHHHHHHHHH
Confidence 999999998754333222222 334555555543
No 252
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.33 E-value=3.4e-12 Score=124.76 Aligned_cols=87 Identities=22% Similarity=0.317 Sum_probs=73.8
Q ss_pred hcccccCCccEEEEEEe------cCCcEEEEEEccccCc-ccHHHHHHHHHHHccC-CCCCCCcceeeeecCC-ceEEEE
Q 012745 340 AETLGRGTIGSTYKAVL------ESGFIVTVKRLKDARY-PRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKE-ERLLVY 410 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~~lv~ 410 (457)
.+.||+|+||.||+|.. .+++.||||+++.... ...+.|.+|++++.++ +|||||+++++|...+ ..++||
T Consensus 27 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~ 106 (359)
T 3vhe_A 27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 106 (359)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEE
T ss_pred ceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEE
Confidence 46899999999999972 3468999999986543 3346799999999999 7999999999998755 489999
Q ss_pred EecCCCchHHHhhhCC
Q 012745 411 DYFPNGSLFSLIHGTC 426 (457)
Q Consensus 411 ey~~~GsL~~~l~~~~ 426 (457)
||+++|+|.++++...
T Consensus 107 e~~~~g~L~~~l~~~~ 122 (359)
T 3vhe_A 107 EFCKFGNLSTYLRSKR 122 (359)
T ss_dssp ECCTTEEHHHHHHTTT
T ss_pred EecCCCcHHHHHHhcc
Confidence 9999999999998753
No 253
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.33 E-value=5.7e-12 Score=121.91 Aligned_cols=107 Identities=22% Similarity=0.336 Sum_probs=81.2
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNG 416 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~G 416 (457)
.+.||+|+||.||+|. ..+++.||||+++.... ...+.+.+|+.++++++||||+++++++...+..++||||++ |
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 117 (329)
T 3gbz_A 39 ITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-N 117 (329)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred EEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-C
Confidence 4689999999999998 56799999999976543 224568899999999999999999999999999999999999 6
Q ss_pred chHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 417 SLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 417 sL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+|.+++............ +.+.|++.+++++
T Consensus 118 ~L~~~~~~~~~~~~~~~~---~i~~ql~~~l~~L 148 (329)
T 3gbz_A 118 DLKKYMDKNPDVSMRVIK---SFLYQLINGVNFC 148 (329)
T ss_dssp EHHHHHHHCTTCCHHHHH---HHHHHHHHHHHHH
T ss_pred CHHHHHhhcCCCCHHHHH---HHHHHHHHHHHHH
Confidence 999999876432222222 2334555555543
No 254
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.33 E-value=2.1e-12 Score=126.77 Aligned_cols=109 Identities=17% Similarity=0.208 Sum_probs=82.9
Q ss_pred hcccccCCccEEEEEE------ecCCcEEEEEEccccCcccHHHHHHHHHHHccCC---CCCCCcceeeeecCCceEEEE
Q 012745 340 AETLGRGTIGSTYKAV------LESGFIVTVKRLKDARYPRLEEFRRHMDILGRLR---HPNLVPLRAYFQAKEERLLVY 410 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~------~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~lv~ 410 (457)
.+.||+|+||.||+|. ..+++.||||+++.. ...++..|+.++.+++ |+||+++++++...+..++||
T Consensus 70 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~ 146 (365)
T 3e7e_A 70 HHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVG 146 (365)
T ss_dssp EEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEE
T ss_pred EEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEE
Confidence 3679999999999994 456889999999764 3567888888888876 999999999999999999999
Q ss_pred EecCCCchHHHhhhCCCCCCchhhH--HHHHHHHHHHHHHhcC
Q 012745 411 DYFPNGSLFSLIHGTCCLATRPLFI--FLFSFFRLIKKVFQMS 451 (457)
Q Consensus 411 ey~~~GsL~~~l~~~~~~~~~~l~~--~~r~~~~i~~~v~~~~ 451 (457)
||+++|+|.++++..+......++| ..+.+.|++.+++++|
T Consensus 147 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH 189 (365)
T 3e7e_A 147 ELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH 189 (365)
T ss_dssp CCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred eccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh
Confidence 9999999999998532111222333 3334556666666644
No 255
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.33 E-value=4.9e-12 Score=122.57 Aligned_cols=109 Identities=19% Similarity=0.339 Sum_probs=83.0
Q ss_pred hcccccCCccEEEEEEec-C----CcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEec
Q 012745 340 AETLGRGTIGSTYKAVLE-S----GFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYF 413 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~-~----g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 413 (457)
.+.||+|+||.||+|... + +..||||.++.... .....|.+|+.++.+++||||+++++++...+..++||||+
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 128 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYM 128 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCC
Confidence 468999999999999853 2 24699999976543 33557999999999999999999999999999999999999
Q ss_pred CCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 414 PNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 414 ~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
++|+|.++++..... .......+.+.+++.+++++
T Consensus 129 ~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~aL~~L 163 (333)
T 1mqb_A 129 ENGALDKFLREKDGE--FSVLQLVGMLRGIAAGMKYL 163 (333)
T ss_dssp TTEEHHHHHHHTTTC--SCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHhCCCC--CCHHHHHHHHHHHHHHHHHH
Confidence 999999999875311 11222233445666655554
No 256
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.33 E-value=2e-12 Score=125.64 Aligned_cols=92 Identities=21% Similarity=0.391 Sum_probs=78.1
Q ss_pred HHHHHHHH--hcccccCCccEEEEEE-ecCCcEEEEEEccccC-----cccHHHHHHHHHHHccCCCCCCCcceeeeecC
Q 012745 332 LEDLLKAS--AETLGRGTIGSTYKAV-LESGFIVTVKRLKDAR-----YPRLEEFRRHMDILGRLRHPNLVPLRAYFQAK 403 (457)
Q Consensus 332 ~~~~~~~~--~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~-----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 403 (457)
+.++.... .+.||+|+||.||+|. ..+++.||+|++.... ....+.+.+|+.++.+++|||||+++++|...
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 44544442 5789999999999999 4678999999986542 23457899999999999999999999999999
Q ss_pred CceEEEEEecCCCchHHHhh
Q 012745 404 EERLLVYDYFPNGSLFSLIH 423 (457)
Q Consensus 404 ~~~~lv~ey~~~GsL~~~l~ 423 (457)
+..++||||+++|+|.+++.
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~ 120 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLN 120 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEE
T ss_pred CeEEEEEeCCCCCcHHHHHH
Confidence 99999999999999999996
No 257
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.32 E-value=3.7e-12 Score=124.50 Aligned_cols=108 Identities=20% Similarity=0.254 Sum_probs=84.1
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccC---cccHHHHHHHHHHHccC-CCCCCCcceeeeecCCceEEEEEecC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDAR---YPRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKEERLLVYDYFP 414 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~ 414 (457)
.+.||+|+||.||+|.. .+|+.||||+++... ....+.+..|..++..+ +||||+++++++...+..|+||||++
T Consensus 25 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 104 (353)
T 2i0e_A 25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 104 (353)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCC
Confidence 46899999999999995 458899999997642 13456788999999988 79999999999999999999999999
Q ss_pred CCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 415 NGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 415 ~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+|+|.++++.......... .+.+.+++.++.++
T Consensus 105 gg~L~~~l~~~~~~~~~~~---~~~~~qi~~aL~~L 137 (353)
T 2i0e_A 105 GGDLMYHIQQVGRFKEPHA---VFYAAEIAIGLFFL 137 (353)
T ss_dssp SCBHHHHHHHHSSCCHHHH---HHHHHHHHHHHHHH
T ss_pred CCcHHHHHHhcCCCCHHHH---HHHHHHHHHHHHHH
Confidence 9999999987542222222 22334555555543
No 258
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.32 E-value=4.9e-12 Score=120.24 Aligned_cols=87 Identities=24% Similarity=0.392 Sum_probs=74.9
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCc---------ccHHHHHHHHHHHccCC-CCCCCcceeeeecCCceEE
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY---------PRLEEFRRHMDILGRLR-HPNLVPLRAYFQAKEERLL 408 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---------~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~l 408 (457)
.+.||+|+||.||+|.. .+|+.||||.++.... ...+.+.+|+.++.++. ||||+++++++...+..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~l 101 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFL 101 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEE
Confidence 46799999999999994 5789999999975431 12356889999999996 9999999999999999999
Q ss_pred EEEecCCCchHHHhhhCC
Q 012745 409 VYDYFPNGSLFSLIHGTC 426 (457)
Q Consensus 409 v~ey~~~GsL~~~l~~~~ 426 (457)
||||+++|+|.+++....
T Consensus 102 v~e~~~~~~L~~~l~~~~ 119 (298)
T 1phk_A 102 VFDLMKKGELFDYLTEKV 119 (298)
T ss_dssp EEECCTTCBHHHHHHHHS
T ss_pred EEeccCCCcHHHHHhccC
Confidence 999999999999998753
No 259
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.32 E-value=3.5e-12 Score=121.25 Aligned_cols=86 Identities=24% Similarity=0.424 Sum_probs=73.4
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeec-------------CCc
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQA-------------KEE 405 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-------------~~~ 405 (457)
.+.||+|+||.||+|. ..+++.||||.+.... ...+.+.+|+.++.+++||||++++++|.. .+.
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (303)
T 1zy4_A 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKST 89 (303)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEE
T ss_pred hheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCc
Confidence 4689999999999999 4679999999996532 345678999999999999999999998864 346
Q ss_pred eEEEEEecCCCchHHHhhhCC
Q 012745 406 RLLVYDYFPNGSLFSLIHGTC 426 (457)
Q Consensus 406 ~~lv~ey~~~GsL~~~l~~~~ 426 (457)
.++||||+++|+|.++++...
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~ 110 (303)
T 1zy4_A 90 LFIQMEYCENGTLYDLIHSEN 110 (303)
T ss_dssp EEEEEECCCSCBHHHHHHHSC
T ss_pred eEEEEecCCCCCHHHhhhccc
Confidence 789999999999999998643
No 260
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.32 E-value=3.6e-12 Score=127.59 Aligned_cols=107 Identities=21% Similarity=0.436 Sum_probs=79.7
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc--------ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEE
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY--------PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVY 410 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 410 (457)
.+.||+|+||.||+|. ..+++.||||++..... .....+.+|+.++.+++|||||++++++. .+..++||
T Consensus 140 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~lv~ 218 (419)
T 3i6u_A 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVL 218 (419)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEEEEEE
T ss_pred EeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCceEEEE
Confidence 4689999999999998 56789999999975421 11234889999999999999999999975 45579999
Q ss_pred EecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 411 DYFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 411 ey~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
||+++|+|.+++............. .+.|++.+++++
T Consensus 219 e~~~~g~L~~~l~~~~~~~~~~~~~---i~~qi~~~l~~L 255 (419)
T 3i6u_A 219 ELMEGGELFDKVVGNKRLKEATCKL---YFYQMLLAVQYL 255 (419)
T ss_dssp ECCTTCBGGGGTSSSCCCCHHHHHH---HHHHHHHHHHHH
T ss_pred EcCCCCcHHHHHhccCCCCHHHHHH---HHHHHHHHHHHH
Confidence 9999999999998654322222222 334555555553
No 261
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.32 E-value=5.6e-12 Score=118.63 Aligned_cols=86 Identities=22% Similarity=0.463 Sum_probs=75.8
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCc---ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY---PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|.. .+|+.||||.+..... ...+.+.+|+.++.+++||||+++++++...+..++||||+++
T Consensus 16 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 95 (278)
T 3cok_A 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHN 95 (278)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred eeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCC
Confidence 46799999999999994 6799999999965421 2346789999999999999999999999999999999999999
Q ss_pred CchHHHhhhC
Q 012745 416 GSLFSLIHGT 425 (457)
Q Consensus 416 GsL~~~l~~~ 425 (457)
|+|.+++...
T Consensus 96 ~~L~~~l~~~ 105 (278)
T 3cok_A 96 GEMNRYLKNR 105 (278)
T ss_dssp EEHHHHHHTC
T ss_pred CcHHHHHhhc
Confidence 9999999875
No 262
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.32 E-value=3.1e-12 Score=124.19 Aligned_cols=106 Identities=23% Similarity=0.298 Sum_probs=82.4
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc---ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY---PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|. ..+++.||||++..... .....+.+|+.+++.++||||+++++++...+..++||||+ +
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~ 92 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-G 92 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-C
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-C
Confidence 4689999999999999 57799999999975421 23457899999999999999999999999999999999999 6
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHh
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQ 449 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~ 449 (457)
|+|.+++........... .+.+.|++.++..
T Consensus 93 g~l~~~l~~~~~l~~~~~---~~i~~qi~~aL~~ 123 (336)
T 3h4j_B 93 GELFDYIVEKKRMTEDEG---RRFFQQIICAIEY 123 (336)
T ss_dssp EEHHHHHHHHCSCCHHHH---HHHHHHHHHHHHH
T ss_pred CcHHHHHHHcCCCCHHHH---HHHHHHHHHHHHH
Confidence 899999976543222222 2233455555544
No 263
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.32 E-value=2.6e-12 Score=125.04 Aligned_cols=104 Identities=20% Similarity=0.355 Sum_probs=80.6
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccC-CCCCCCcceeeeecCCceEEEEEecCCCc
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKEERLLVYDYFPNGS 417 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~~Gs 417 (457)
.+.||+|+||.||+|. ..+|+.||||+++.... .+.+|++++.++ +|||||++++++...+..|+||||+++|+
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~ 102 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGE 102 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCc
Confidence 4689999999999999 45799999999976542 245688888887 79999999999999999999999999999
Q ss_pred hHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 418 LFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 418 L~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|.+++.......+....... .+++.+++++
T Consensus 103 L~~~i~~~~~~~~~~~~~~~---~qi~~al~~l 132 (342)
T 2qr7_A 103 LLDKILRQKFFSEREASAVL---FTITKTVEYL 132 (342)
T ss_dssp HHHHHHTCTTCCHHHHHHHH---HHHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHH---HHHHHHHHHH
Confidence 99999875433322232333 4555555543
No 264
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.32 E-value=4.4e-12 Score=124.95 Aligned_cols=109 Identities=22% Similarity=0.314 Sum_probs=81.3
Q ss_pred hcccccCCccEEEEEEec--CC--cEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeec-CCceEEEEEec
Q 012745 340 AETLGRGTIGSTYKAVLE--SG--FIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQA-KEERLLVYDYF 413 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~--~g--~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lv~ey~ 413 (457)
.+.||+|+||.||+|... ++ ..||||.++.... ...+.|.+|+.++++++|||||+++++|.. .+..++||||+
T Consensus 94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~ 173 (373)
T 3c1x_A 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 173 (373)
T ss_dssp EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECC
T ss_pred CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECC
Confidence 468999999999999842 22 4689999976433 446789999999999999999999998765 45789999999
Q ss_pred CCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 414 PNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 414 ~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
++|+|.++++..... .......+.+.|++.+++++
T Consensus 174 ~~g~L~~~l~~~~~~--~~~~~~~~i~~qi~~aL~~L 208 (373)
T 3c1x_A 174 KHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKFL 208 (373)
T ss_dssp TTCBHHHHHHCTTCC--CBHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHhhcccC--CCHHHHHHHHHHHHHHHHHH
Confidence 999999999864321 11222223345666666554
No 265
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.32 E-value=4.3e-12 Score=122.53 Aligned_cols=87 Identities=23% Similarity=0.340 Sum_probs=73.0
Q ss_pred hcccccCCccEEEEEEe------cCCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEe
Q 012745 340 AETLGRGTIGSTYKAVL------ESGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDY 412 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 412 (457)
.+.||+|+||.||+|.. .++..||||.+..... .....|.+|+.++.+++||||+++++++...+..++||||
T Consensus 35 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 114 (327)
T 2yfx_A 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMEL 114 (327)
T ss_dssp EEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred EEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEec
Confidence 46899999999999983 3477899999975432 3456799999999999999999999999999999999999
Q ss_pred cCCCchHHHhhhCC
Q 012745 413 FPNGSLFSLIHGTC 426 (457)
Q Consensus 413 ~~~GsL~~~l~~~~ 426 (457)
+++|+|.++++...
T Consensus 115 ~~~~~L~~~l~~~~ 128 (327)
T 2yfx_A 115 MAGGDLKSFLRETR 128 (327)
T ss_dssp CTTEEHHHHHHHTS
T ss_pred CCCCcHHHHHHhhc
Confidence 99999999998754
No 266
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.32 E-value=7.4e-12 Score=121.30 Aligned_cols=87 Identities=22% Similarity=0.379 Sum_probs=74.6
Q ss_pred hcccccCCccEEEEEEe--------cCCcEEEEEEccccCc-ccHHHHHHHHHHHccC-CCCCCCcceeeeecCCceEEE
Q 012745 340 AETLGRGTIGSTYKAVL--------ESGFIVTVKRLKDARY-PRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKEERLLV 409 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~--------~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 409 (457)
.+.||+|+||.||+|.. .++..||||+++.... ...+.+.+|+.++.++ +||||++++++|...+..++|
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 119 (334)
T 2pvf_A 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 119 (334)
T ss_dssp EEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEE
T ss_pred eeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEE
Confidence 57899999999999984 3467899999986543 3456789999999999 899999999999999999999
Q ss_pred EEecCCCchHHHhhhCC
Q 012745 410 YDYFPNGSLFSLIHGTC 426 (457)
Q Consensus 410 ~ey~~~GsL~~~l~~~~ 426 (457)
|||+++|+|.+++....
T Consensus 120 ~e~~~~~~L~~~l~~~~ 136 (334)
T 2pvf_A 120 VEYASKGNLREYLRARR 136 (334)
T ss_dssp EECCTTCBHHHHHHTTS
T ss_pred EECCCCCcHHHHHHHhc
Confidence 99999999999998754
No 267
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.32 E-value=6e-12 Score=119.57 Aligned_cols=109 Identities=17% Similarity=0.294 Sum_probs=81.6
Q ss_pred hcccccCCccEEEEEEe-cCC---cEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCce-EEEEEec
Q 012745 340 AETLGRGTIGSTYKAVL-ESG---FIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEER-LLVYDYF 413 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g---~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~-~lv~ey~ 413 (457)
.+.||+|+||.||+|.. .++ ..||+|.+..... ...+.|.+|+.++++++||||+++++++...+.. ++||||+
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 105 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYM 105 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecc
Confidence 47899999999999984 333 3799999976543 3456799999999999999999999999876655 9999999
Q ss_pred CCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 414 PNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 414 ~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
.+|+|.++++..... .......+.+.+++.+++++
T Consensus 106 ~~~~L~~~~~~~~~~--~~~~~~~~i~~qi~~~l~~L 140 (298)
T 3pls_A 106 CHGDLLQFIRSPQRN--PTVKDLISFGLQVARGMEYL 140 (298)
T ss_dssp TTCBHHHHHHCTTCC--CBHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHhccccC--CCHHHHHHHHHHHHHHHHHH
Confidence 999999999874311 11222223334566655553
No 268
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.32 E-value=4.1e-12 Score=119.65 Aligned_cols=108 Identities=26% Similarity=0.440 Sum_probs=83.9
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc---ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY---PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|. ..+++.||||++..... ...+.+.+|+.++++++||||++++++|...+..++||||+++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 93 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPL 93 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCC
Confidence 4689999999999998 45688999999965421 2356789999999999999999999999999999999999999
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|+|.+++......... .....+.+++.+++..
T Consensus 94 ~~l~~~l~~~~~~~~~---~~~~~~~qi~~~l~~L 125 (279)
T 3fdn_A 94 GTVYRELQKLSKFDEQ---RTATYITELANALSYC 125 (279)
T ss_dssp EEHHHHHHHHSSCCHH---HHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHhcCCCCHH---HHHHHHHHHHHHHHHH
Confidence 9999999865422222 2222334555555554
No 269
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.32 E-value=6.8e-12 Score=120.70 Aligned_cols=85 Identities=24% Similarity=0.411 Sum_probs=66.7
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCc
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGS 417 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~Gs 417 (457)
.+.||+|+||.||+|. ..+|+.||||+++.... ...+.+.+|+.++++++|||||++++++...+..++||||++ |+
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~ 88 (317)
T 2pmi_A 10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-ND 88 (317)
T ss_dssp ---------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CB
T ss_pred eeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CC
Confidence 3679999999999999 46799999999975532 345678999999999999999999999999999999999999 69
Q ss_pred hHHHhhhC
Q 012745 418 LFSLIHGT 425 (457)
Q Consensus 418 L~~~l~~~ 425 (457)
|.+++...
T Consensus 89 L~~~l~~~ 96 (317)
T 2pmi_A 89 LKKYMDSR 96 (317)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99999753
No 270
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.32 E-value=6.1e-12 Score=118.44 Aligned_cols=84 Identities=27% Similarity=0.459 Sum_probs=74.1
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCchH
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLF 419 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL~ 419 (457)
.+.||+|+||.||+|...++..||||.+.... ...+.|.+|++++.+++||||+++++++. .+..++||||+++|+|.
T Consensus 18 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~ 95 (279)
T 1qpc_A 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLV 95 (279)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHH
T ss_pred eeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHH
Confidence 46899999999999998888899999997654 45678999999999999999999999886 45689999999999999
Q ss_pred HHhhhC
Q 012745 420 SLIHGT 425 (457)
Q Consensus 420 ~~l~~~ 425 (457)
+++...
T Consensus 96 ~~l~~~ 101 (279)
T 1qpc_A 96 DFLKTP 101 (279)
T ss_dssp HHTTSH
T ss_pred HHHhcC
Confidence 999753
No 271
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.32 E-value=8.4e-12 Score=118.42 Aligned_cols=107 Identities=24% Similarity=0.295 Sum_probs=80.5
Q ss_pred cccccCCccEEEEEE-ecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCc
Q 012745 341 ETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGS 417 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~Gs 417 (457)
+.||+|+||.||+|. ..+++.||||+++.... ...+.+.+|+.++.+++||||+++++++...+..++||||+++ +
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 86 (292)
T 3o0g_A 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-D 86 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-E
T ss_pred eEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-C
Confidence 679999999999999 46799999999975543 3346788999999999999999999999999999999999994 6
Q ss_pred hHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 418 LFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 418 L~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+.+++...... .......+.+.|++.++++.
T Consensus 87 l~~~~~~~~~~--l~~~~~~~~~~ql~~~l~~l 117 (292)
T 3o0g_A 87 LKKYFDSCNGD--LDPEIVKSFLFQLLKGLGFC 117 (292)
T ss_dssp HHHHHHHTTTC--CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCC--CCHHHHHHHHHHHHHHHHHH
Confidence 77766653211 11122222334555555543
No 272
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.32 E-value=4.9e-12 Score=123.46 Aligned_cols=85 Identities=24% Similarity=0.468 Sum_probs=73.6
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc---ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY---PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|. ..+|+.||||++..... ...+.|.+|++++.+++|||||+++++|...+..++||||++
T Consensus 59 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~- 137 (348)
T 1u5q_A 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL- 137 (348)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred eeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-
Confidence 3679999999999999 56799999999975533 224578999999999999999999999999999999999998
Q ss_pred CchHHHhhhC
Q 012745 416 GSLFSLIHGT 425 (457)
Q Consensus 416 GsL~~~l~~~ 425 (457)
|+|.+++...
T Consensus 138 g~l~~~l~~~ 147 (348)
T 1u5q_A 138 GSASDLLEVH 147 (348)
T ss_dssp EEHHHHHHHH
T ss_pred CCHHHHHHHh
Confidence 7899888653
No 273
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.31 E-value=3.5e-12 Score=122.74 Aligned_cols=86 Identities=20% Similarity=0.359 Sum_probs=75.0
Q ss_pred hcccccCCccEEEEEEec------CCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEe
Q 012745 340 AETLGRGTIGSTYKAVLE------SGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDY 412 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~------~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 412 (457)
.+.||+|+||.||+|... +++.||||.+..... .....|.+|+.++.+++|+||+++++++...+..++||||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 109 (322)
T 1p4o_A 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 109 (322)
T ss_dssp EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEe
Confidence 468999999999999743 478899999986543 3355799999999999999999999999999999999999
Q ss_pred cCCCchHHHhhhC
Q 012745 413 FPNGSLFSLIHGT 425 (457)
Q Consensus 413 ~~~GsL~~~l~~~ 425 (457)
+++|+|.++++..
T Consensus 110 ~~~~~L~~~l~~~ 122 (322)
T 1p4o_A 110 MTRGDLKSYLRSL 122 (322)
T ss_dssp CTTCBHHHHHHHH
T ss_pred CCCCcHHHHHHHh
Confidence 9999999999863
No 274
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.31 E-value=7e-12 Score=132.01 Aligned_cols=106 Identities=18% Similarity=0.247 Sum_probs=82.0
Q ss_pred cccccCCccEEEEEEe---cCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCC
Q 012745 341 ETLGRGTIGSTYKAVL---ESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~~---~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
+.||+|+||.||+|.+ .+++.||||+++.... ...++|.+|+.+|.+++|||||+++++|. .+..++|||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 4799999999999964 3468999999986532 33578999999999999999999999996 4568899999999
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|+|.++++........ .....+.+++.+++++
T Consensus 454 g~L~~~l~~~~~l~~~---~~~~i~~qi~~~L~yL 485 (635)
T 4fl3_A 454 GPLNKYLQQNRHVKDK---NIIELVHQVSMGMKYL 485 (635)
T ss_dssp EEHHHHHHHCTTCCHH---HHHHHHHHHHHHHHHH
T ss_pred CCHHHHHhhCCCCCHH---HHHHHHHHHHHHHHHH
Confidence 9999999875422222 2223445666666554
No 275
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.31 E-value=9.3e-12 Score=118.70 Aligned_cols=86 Identities=16% Similarity=0.411 Sum_probs=76.5
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCc
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGS 417 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~Gs 417 (457)
.+.||+|+||.||+|. ..+++.||||.+..... ...+.+.+|+.++.+++||||+++++++...+..++||||+++|+
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 106 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS 106 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred hhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCc
Confidence 4679999999999998 46799999999976542 446789999999999999999999999999999999999999999
Q ss_pred hHHHhhhC
Q 012745 418 LFSLIHGT 425 (457)
Q Consensus 418 L~~~l~~~ 425 (457)
|.+++...
T Consensus 107 L~~~~~~~ 114 (303)
T 3a7i_A 107 ALDLLEPG 114 (303)
T ss_dssp HHHHHTTS
T ss_pred HHHHHhcC
Confidence 99999764
No 276
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.31 E-value=1.2e-11 Score=116.30 Aligned_cols=85 Identities=26% Similarity=0.409 Sum_probs=65.0
Q ss_pred cccccCCccEEEEEE-ecCCcEEEEEEccccCc---ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCC
Q 012745 341 ETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY---PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNG 416 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~G 416 (457)
+.||+|+||.||+|. ..+++.||+|++..... ...+.+.+|+.++++++||||+++++++...+..++||||+ +|
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 97 (275)
T 2eue_A 19 KTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GN 97 (275)
T ss_dssp C---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-CE
T ss_pred EEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-CC
Confidence 579999999999998 56799999999976432 33567899999999999999999999999999999999999 58
Q ss_pred chHHHhhhCC
Q 012745 417 SLFSLIHGTC 426 (457)
Q Consensus 417 sL~~~l~~~~ 426 (457)
+|.+++....
T Consensus 98 ~l~~~~~~~~ 107 (275)
T 2eue_A 98 ELFDYIVQRD 107 (275)
T ss_dssp EHHHHHHTSS
T ss_pred cHHHHHHhcC
Confidence 9999888754
No 277
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.31 E-value=4.8e-12 Score=119.54 Aligned_cols=108 Identities=23% Similarity=0.440 Sum_probs=83.9
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCc---ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY---PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|.. .+++.||||.+..... ...+.+.+|++++.+++||||+++++++...+..++||||+++
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 98 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPR 98 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCC
Confidence 46899999999999994 5688999999965421 2356789999999999999999999999999999999999999
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|+|.+++...........- +.+.+++.+++++
T Consensus 99 ~~L~~~l~~~~~~~~~~~~---~~~~qi~~~l~~l 130 (284)
T 2vgo_A 99 GELYKELQKHGRFDEQRSA---TFMEELADALHYC 130 (284)
T ss_dssp EEHHHHHHHHSSCCHHHHH---HHHHHHHHHHHHH
T ss_pred CcHHHHHHhcCCCCHHHHH---HHHHHHHHHHHHH
Confidence 9999999875422222222 2334555555543
No 278
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.31 E-value=9.5e-12 Score=117.34 Aligned_cols=86 Identities=17% Similarity=0.324 Sum_probs=72.4
Q ss_pred hcccccCCccEEEEEEec----CCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecC
Q 012745 340 AETLGRGTIGSTYKAVLE----SGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFP 414 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 414 (457)
.+.||+|+||.||+|... .+..||+|.++.... ...+.|.+|+.++.+++||||+++++++. .+..++||||++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~ 98 (281)
T 1mp8_A 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCT 98 (281)
T ss_dssp EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred EeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEecCC
Confidence 468999999999999853 256799999976543 33567999999999999999999999984 567899999999
Q ss_pred CCchHHHhhhCC
Q 012745 415 NGSLFSLIHGTC 426 (457)
Q Consensus 415 ~GsL~~~l~~~~ 426 (457)
+|+|.++++...
T Consensus 99 ~~~L~~~l~~~~ 110 (281)
T 1mp8_A 99 LGELRSFLQVRK 110 (281)
T ss_dssp TEEHHHHHHHTT
T ss_pred CCCHHHHHHhcC
Confidence 999999998653
No 279
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.31 E-value=8.8e-12 Score=123.20 Aligned_cols=87 Identities=21% Similarity=0.330 Sum_probs=75.2
Q ss_pred hcccccCCccEEEEEEe--------cCCcEEEEEEccccCc-ccHHHHHHHHHHHccC-CCCCCCcceeeeecCCceEEE
Q 012745 340 AETLGRGTIGSTYKAVL--------ESGFIVTVKRLKDARY-PRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKEERLLV 409 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~--------~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 409 (457)
.+.||+|+||.||+|.. .++..||||+++.... ...+.+.+|++++.++ +|||||+++++|...+..++|
T Consensus 74 ~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 153 (382)
T 3tt0_A 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 153 (382)
T ss_dssp EEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEE
Confidence 46899999999999984 2246899999976543 3356799999999999 899999999999999999999
Q ss_pred EEecCCCchHHHhhhCC
Q 012745 410 YDYFPNGSLFSLIHGTC 426 (457)
Q Consensus 410 ~ey~~~GsL~~~l~~~~ 426 (457)
|||+++|+|.+++....
T Consensus 154 ~e~~~~g~L~~~l~~~~ 170 (382)
T 3tt0_A 154 VEYASKGNLREYLQARR 170 (382)
T ss_dssp EECCTTCBHHHHHHHTC
T ss_pred EEecCCCcHHHHHHHhc
Confidence 99999999999998754
No 280
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.31 E-value=4.6e-12 Score=120.57 Aligned_cols=107 Identities=21% Similarity=0.339 Sum_probs=77.1
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc--------------------------ccHHHHHHHHHHHccCCCCC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY--------------------------PRLEEFRRHMDILGRLRHPN 392 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--------------------------~~~~~~~~E~~~l~~l~H~n 392 (457)
.+.||+|+||.||+|. ..+++.||||++..... ...+.+.+|++++++++|||
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 97 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPN 97 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTT
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCC
Confidence 4679999999999998 56789999999965431 11246889999999999999
Q ss_pred CCcceeeeec--CCceEEEEEecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 393 LVPLRAYFQA--KEERLLVYDYFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 393 iv~l~~~~~~--~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|+++++++.. .+..++||||+++|+|.+++.... ... ....+.+.|++.+++++
T Consensus 98 iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-~~~---~~~~~~~~qi~~~l~~l 153 (298)
T 2zv2_A 98 VVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP-LSE---DQARFYFQDLIKGIEYL 153 (298)
T ss_dssp BCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSC-CCH---HHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCC-CCH---HHHHHHHHHHHHHHHHH
Confidence 9999999986 567899999999999998765432 111 22222334566555553
No 281
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.30 E-value=6.6e-12 Score=120.95 Aligned_cols=107 Identities=21% Similarity=0.438 Sum_probs=78.6
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc--------ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEE
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY--------PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVY 410 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 410 (457)
.+.||+|+||.||+|. ..+++.||||.+..... .....+.+|++++.+++||||+++++++...+ .++||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~ 93 (322)
T 2ycf_A 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVL 93 (322)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEE
T ss_pred eeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEE
Confidence 4789999999999998 46689999999975431 12345889999999999999999999987654 89999
Q ss_pred EecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 411 DYFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 411 ey~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
||+++|+|.+++............. .+.|++.+++++
T Consensus 94 e~~~~~~L~~~~~~~~~~~~~~~~~---~~~qi~~~l~~l 130 (322)
T 2ycf_A 94 ELMEGGELFDKVVGNKRLKEATCKL---YFYQMLLAVQYL 130 (322)
T ss_dssp ECCTTEETHHHHSTTCCCCHHHHHH---HHHHHHHHHHHH
T ss_pred ecCCCCcHHHHHhccCCCCHHHHHH---HHHHHHHHHHHH
Confidence 9999999999998654322222222 234555555543
No 282
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.30 E-value=1.1e-11 Score=117.34 Aligned_cols=87 Identities=23% Similarity=0.340 Sum_probs=76.7
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNG 416 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~G 416 (457)
.+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.++.+++||||+++++++...+..++||||+++|
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 106 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCC
Confidence 47899999999999995 5799999999965432 34678999999999999999999999999999999999999999
Q ss_pred chHHHhhhCC
Q 012745 417 SLFSLIHGTC 426 (457)
Q Consensus 417 sL~~~l~~~~ 426 (457)
+|.+++....
T Consensus 107 ~L~~~l~~~~ 116 (287)
T 2wei_A 107 ELFDEIIKRK 116 (287)
T ss_dssp BHHHHHHHHS
T ss_pred CHHHHHHhcC
Confidence 9999987644
No 283
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.30 E-value=5.2e-12 Score=130.54 Aligned_cols=110 Identities=18% Similarity=0.173 Sum_probs=85.8
Q ss_pred cccccCCccEEEEEE-ecCCcEEEEEEccccC---cccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCC
Q 012745 341 ETLGRGTIGSTYKAV-LESGFIVTVKRLKDAR---YPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNG 416 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~G 416 (457)
+.||+|+||.||+|. ..+|+.||||++.... ......+.+|+.++.+++|||||++++++.+.+..|+||||+++|
T Consensus 190 ~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg 269 (576)
T 2acx_A 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGG 269 (576)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCC
Confidence 689999999999999 4679999999997542 134567889999999999999999999999999999999999999
Q ss_pred chHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 417 SLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 417 sL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
+|.+++...... ..........+.||+.++.++|
T Consensus 270 ~L~~~l~~~~~~-~l~e~~~~~i~~qIl~aL~yLH 303 (576)
T 2acx_A 270 DLKFHIYHMGQA-GFPEARAVFYAAEICCGLEDLH 303 (576)
T ss_dssp BHHHHHHSSSSC-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 999999864321 1112223334456666666543
No 284
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.30 E-value=1.7e-11 Score=117.19 Aligned_cols=85 Identities=26% Similarity=0.448 Sum_probs=73.4
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc---ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY---PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|. ..+|+.||||+++.... ...+.+.+|+.++.+++|+||+++++++...+..++||||+++
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 116 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADA 116 (310)
T ss_dssp EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCS
T ss_pred EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCC
Confidence 4689999999999999 46799999999976432 3356789999999999999999999999999999999999999
Q ss_pred CchHHHhhh
Q 012745 416 GSLFSLIHG 424 (457)
Q Consensus 416 GsL~~~l~~ 424 (457)
|+|.+++..
T Consensus 117 ~~L~~~l~~ 125 (310)
T 2wqm_A 117 GDLSRMIKH 125 (310)
T ss_dssp CBHHHHHHH
T ss_pred CCHHHHHHH
Confidence 999999975
No 285
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.30 E-value=9.4e-12 Score=118.00 Aligned_cols=106 Identities=18% Similarity=0.254 Sum_probs=79.2
Q ss_pred cccccCCccEEEEEEe---cCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCC
Q 012745 341 ETLGRGTIGSTYKAVL---ESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~~---~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
+.||+|+||.||+|.. .+++.||||.++.... ...+.|.+|+.++..++||||+++++++ ..+..++||||+++
T Consensus 23 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~ 101 (291)
T 1xbb_A 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAEL 101 (291)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred CccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCC
Confidence 3899999999999963 3478999999976532 2356799999999999999999999999 56778999999999
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|+|.++++.......... .+.+.+++.+++.+
T Consensus 102 ~~L~~~l~~~~~~~~~~~---~~i~~qi~~~l~~L 133 (291)
T 1xbb_A 102 GPLNKYLQQNRHVKDKNI---IELVHQVSMGMKYL 133 (291)
T ss_dssp EEHHHHHHHCTTCCHHHH---HHHHHHHHHHHHHH
T ss_pred CCHHHHHHhCcCCCHHHH---HHHHHHHHHHHHHH
Confidence 999999987542222222 22334555555543
No 286
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.30 E-value=6.3e-12 Score=129.37 Aligned_cols=111 Identities=18% Similarity=0.228 Sum_probs=85.3
Q ss_pred cccccCCccEEEEEEe-cCCcEEEEEEccccCc---ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCC
Q 012745 341 ETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY---PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNG 416 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~G 416 (457)
++||+|+||.||+|.. .+|+.||+|++..... ...+.+.+|+.++.+++|||||++++++...+..|+||||+++|
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg 270 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGG 270 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCC
Confidence 4699999999999995 5799999999975432 33567899999999999999999999999999999999999999
Q ss_pred chHHHhhhCCCCC-CchhhHHHHHHHHHHHHHHhcC
Q 012745 417 SLFSLIHGTCCLA-TRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 417 sL~~~l~~~~~~~-~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
+|.+++....... ..........+.|++.++.+++
T Consensus 271 ~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH 306 (543)
T 3c4z_A 271 DIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306 (543)
T ss_dssp BHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH
Confidence 9999998643111 1112222233456666666543
No 287
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.29 E-value=1.1e-11 Score=117.96 Aligned_cols=87 Identities=25% Similarity=0.416 Sum_probs=71.8
Q ss_pred hcccccCCccEEEEEEecC----CcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeec-CCceEEEEEec
Q 012745 340 AETLGRGTIGSTYKAVLES----GFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQA-KEERLLVYDYF 413 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lv~ey~ 413 (457)
.+.||+|+||.||+|...+ ...||+|.+..... ...+.|.+|+.++++++||||++++++|.. .+..++||||+
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 109 (298)
T 3f66_A 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 109 (298)
T ss_dssp EEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECC
T ss_pred cceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCC
Confidence 4689999999999998432 23689999986543 345679999999999999999999998654 55789999999
Q ss_pred CCCchHHHhhhCC
Q 012745 414 PNGSLFSLIHGTC 426 (457)
Q Consensus 414 ~~GsL~~~l~~~~ 426 (457)
++|+|.++++...
T Consensus 110 ~~~~L~~~l~~~~ 122 (298)
T 3f66_A 110 KHGDLRNFIRNET 122 (298)
T ss_dssp TTCBHHHHHHCTT
T ss_pred CCCCHHHHHHhcc
Confidence 9999999998643
No 288
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.29 E-value=7e-12 Score=119.30 Aligned_cols=85 Identities=24% Similarity=0.421 Sum_probs=59.5
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCc
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGS 417 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~Gs 417 (457)
.+.||+|+||.||+|. ..+++.||||++..... ...+++.+|+.++.+++||||+++++++...+..++||||+++|+
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 99 (303)
T 2vwi_A 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGS 99 (303)
T ss_dssp EEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCB
T ss_pred hheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCc
Confidence 4689999999999999 45789999999976532 345678899999999999999999999999999999999999999
Q ss_pred hHHHhhh
Q 012745 418 LFSLIHG 424 (457)
Q Consensus 418 L~~~l~~ 424 (457)
|.+++..
T Consensus 100 L~~~l~~ 106 (303)
T 2vwi_A 100 VLDIIKH 106 (303)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 9999974
No 289
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.29 E-value=1.6e-11 Score=118.11 Aligned_cols=87 Identities=25% Similarity=0.394 Sum_probs=73.9
Q ss_pred hcccccCCccEEEEEEe-----cCCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecC--CceEEEEE
Q 012745 340 AETLGRGTIGSTYKAVL-----ESGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAK--EERLLVYD 411 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-----~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv~e 411 (457)
.+.||+|+||.||++.+ .+++.||||+++.... ...+.|.+|++++.+++||||+++++++... ...++|||
T Consensus 36 ~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 115 (318)
T 3lxp_A 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVME 115 (318)
T ss_dssp EEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEEC
T ss_pred hheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEe
Confidence 46799999999998863 3688999999986543 3356799999999999999999999999874 56789999
Q ss_pred ecCCCchHHHhhhCC
Q 012745 412 YFPNGSLFSLIHGTC 426 (457)
Q Consensus 412 y~~~GsL~~~l~~~~ 426 (457)
|+++|+|.+++....
T Consensus 116 ~~~~~~L~~~l~~~~ 130 (318)
T 3lxp_A 116 YVPLGSLRDYLPRHS 130 (318)
T ss_dssp CCTTCBHHHHGGGSC
T ss_pred cccCCcHHHHHhhCC
Confidence 999999999998754
No 290
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.29 E-value=1.1e-11 Score=119.81 Aligned_cols=108 Identities=23% Similarity=0.290 Sum_probs=83.2
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNG 416 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~G 416 (457)
.+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|+.++.+++||||++++++|...+..++||||++++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 109 (331)
T 4aaa_A 30 LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHT 109 (331)
T ss_dssp EEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred eeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcc
Confidence 46899999999999994 5699999999865543 22456889999999999999999999999999999999999999
Q ss_pred chHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 417 SLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 417 sL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+|.+++......... ...+.+.+++.+++++
T Consensus 110 ~l~~~~~~~~~~~~~---~~~~~~~qi~~~l~~L 140 (331)
T 4aaa_A 110 ILDDLELFPNGLDYQ---VVQKYLFQIINGIGFC 140 (331)
T ss_dssp HHHHHHHSTTCCCHH---HHHHHHHHHHHHHHHH
T ss_pred hHHHHHhhccCCCHH---HHHHHHHHHHHHHHHH
Confidence 999887654422222 2222334555555543
No 291
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.29 E-value=8.4e-12 Score=121.28 Aligned_cols=88 Identities=23% Similarity=0.366 Sum_probs=74.1
Q ss_pred HhcccccCCccEEEEEEe------cCCcEEEEEEccccCc-ccHHHHHHHHHHHccC-CCCCCCcceeeeecCCceEEEE
Q 012745 339 SAETLGRGTIGSTYKAVL------ESGFIVTVKRLKDARY-PRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKEERLLVY 410 (457)
Q Consensus 339 ~~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 410 (457)
..+.||+|+||.||+|.. .++..||||.+..... ...+.+.+|+.++.++ +||||++++++|...+..++||
T Consensus 49 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 128 (344)
T 1rjb_A 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF 128 (344)
T ss_dssp EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEE
Confidence 357899999999999984 2456899999975432 3456799999999999 8999999999999999999999
Q ss_pred EecCCCchHHHhhhCC
Q 012745 411 DYFPNGSLFSLIHGTC 426 (457)
Q Consensus 411 ey~~~GsL~~~l~~~~ 426 (457)
||+++|+|.+++....
T Consensus 129 e~~~~g~L~~~l~~~~ 144 (344)
T 1rjb_A 129 EYCCYGDLLNYLRSKR 144 (344)
T ss_dssp ECCTTCBHHHHHHTTT
T ss_pred ecCCCCcHHHHHhhcc
Confidence 9999999999998754
No 292
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.29 E-value=4.6e-12 Score=123.27 Aligned_cols=108 Identities=12% Similarity=0.258 Sum_probs=84.0
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCccc-----------------HHHHHHHHHHHccCCCCCCCcceeeeec
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPR-----------------LEEFRRHMDILGRLRHPNLVPLRAYFQA 402 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~-----------------~~~~~~E~~~l~~l~H~niv~l~~~~~~ 402 (457)
.+.||+|+||.||+|.. +|+.||||.+....... .+.|.+|+.++.+++||||+++++++..
T Consensus 36 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 114 (348)
T 2pml_X 36 IRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITN 114 (348)
T ss_dssp EEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEES
T ss_pred EEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEee
Confidence 46899999999999998 89999999997542211 1789999999999999999999999999
Q ss_pred CCceEEEEEecCCCchHHH------hhhCCCCCCchhhHH--HHHHHHHHHHHHhcC
Q 012745 403 KEERLLVYDYFPNGSLFSL------IHGTCCLATRPLFIF--LFSFFRLIKKVFQMS 451 (457)
Q Consensus 403 ~~~~~lv~ey~~~GsL~~~------l~~~~~~~~~~l~~~--~r~~~~i~~~v~~~~ 451 (457)
.+..++||||+++|+|.++ ++... ...+++. .+.+.+++.++++.+
T Consensus 115 ~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH 168 (348)
T 2pml_X 115 YDEVYIIYEYMENDSILKFDEYFFVLDKNY---TCFIPIQVIKCIIKSVLNSFSYIH 168 (348)
T ss_dssp SSEEEEEEECCTTCBSSEESSSEESSCSSS---CCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeccCCCcHHHHHHHhhhhhhcc---ccCCCHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999 55421 1122222 234456666666554
No 293
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.29 E-value=8.4e-12 Score=117.42 Aligned_cols=86 Identities=24% Similarity=0.355 Sum_probs=73.7
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeec--CCceEEEEEecC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQA--KEERLLVYDYFP 414 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lv~ey~~ 414 (457)
.+.||+|+||.||++.. .+++.||+|.+..... ...+.+.+|+.++.+++||||+++++++.. ....++||||++
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 90 (279)
T 2w5a_A 11 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 90 (279)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCT
T ss_pred ehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCC
Confidence 36799999999999994 5799999999976532 335678999999999999999999998854 567899999999
Q ss_pred CCchHHHhhhC
Q 012745 415 NGSLFSLIHGT 425 (457)
Q Consensus 415 ~GsL~~~l~~~ 425 (457)
+|+|.+++...
T Consensus 91 ~~~L~~~l~~~ 101 (279)
T 2w5a_A 91 GGDLASVITKG 101 (279)
T ss_dssp TEEHHHHHHHH
T ss_pred CCCHHHHHHhh
Confidence 99999999863
No 294
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.28 E-value=9e-12 Score=120.37 Aligned_cols=109 Identities=18% Similarity=0.271 Sum_probs=77.1
Q ss_pred hcccccCCccEEEEEE-ecCCc----EEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEec
Q 012745 340 AETLGRGTIGSTYKAV-LESGF----IVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYF 413 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~----~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 413 (457)
.+.||+|+||.||+|. ..+++ .||+|.++.... ...+.|.+|+.++++++|||||+++++|... ..++|+||+
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~v~e~~ 98 (327)
T 3poz_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLM 98 (327)
T ss_dssp EEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEEEEECC
T ss_pred ceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEEEEEec
Confidence 4689999999999998 44554 368888865432 4567899999999999999999999999865 478999999
Q ss_pred CCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 414 PNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 414 ~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
++|+|.++++..... .......+.+.+++.+++++|
T Consensus 99 ~~g~L~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~LH 134 (327)
T 3poz_A 99 PFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLE 134 (327)
T ss_dssp TTCBHHHHHHHSTTS--CCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHh
Confidence 999999999875421 112222233456666665543
No 295
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.28 E-value=9.7e-13 Score=127.66 Aligned_cols=109 Identities=14% Similarity=0.207 Sum_probs=78.3
Q ss_pred HHhcccccCCccEEEEEEecCCcEEEEEEccccCc--------ccHHHHHHHHHHHccCC---------CCCCCcceee-
Q 012745 338 ASAETLGRGTIGSTYKAVLESGFIVTVKRLKDARY--------PRLEEFRRHMDILGRLR---------HPNLVPLRAY- 399 (457)
Q Consensus 338 ~~~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l~---------H~niv~l~~~- 399 (457)
...+.||+|+||.||+|.. +|+.||||+++.... ...+.+.+|+.++++++ |+|||++.+.
T Consensus 23 ~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~ 101 (336)
T 2vuw_A 23 QRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVH 101 (336)
T ss_dssp HTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEE
T ss_pred hheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhccee
Confidence 3467899999999999987 689999999976531 23477899999998886 6666666554
Q ss_pred ----------------eec-------------CCceEEEEEecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 400 ----------------FQA-------------KEERLLVYDYFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 400 ----------------~~~-------------~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+.. .+..++||||+++|++.+.+.+.. .. .......+.|++.+++++
T Consensus 102 ~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~-~~---~~~~~~i~~qi~~aL~~l 177 (336)
T 2vuw_A 102 CVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKL-SS---LATAKSILHQLTASLAVA 177 (336)
T ss_dssp EEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTC-CC---HHHHHHHHHHHHHHHHHH
T ss_pred EecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcC-CC---HHHHHHHHHHHHHHHHHH
Confidence 332 678999999999998777775432 12 233334445677776665
Q ss_pred C
Q 012745 451 S 451 (457)
Q Consensus 451 ~ 451 (457)
+
T Consensus 178 H 178 (336)
T 2vuw_A 178 E 178 (336)
T ss_dssp H
T ss_pred H
Confidence 5
No 296
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.28 E-value=1.5e-11 Score=118.80 Aligned_cols=88 Identities=24% Similarity=0.503 Sum_probs=73.1
Q ss_pred HhcccccCCccEEEEEE-ecCCcEE--EEEEccccCc-ccHHHHHHHHHHHccC-CCCCCCcceeeeecCCceEEEEEec
Q 012745 339 SAETLGRGTIGSTYKAV-LESGFIV--TVKRLKDARY-PRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKEERLLVYDYF 413 (457)
Q Consensus 339 ~~~~lg~G~~g~Vy~~~-~~~g~~v--avK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~ 413 (457)
..+.||+|+||.||+|. ..++..+ |||.++.... ...+.+.+|++++.++ +||||+++++++...+..++||||+
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 108 (327)
T 1fvr_A 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 108 (327)
T ss_dssp EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred ceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecC
Confidence 35789999999999998 4566654 9999875432 3456789999999999 8999999999999999999999999
Q ss_pred CCCchHHHhhhCC
Q 012745 414 PNGSLFSLIHGTC 426 (457)
Q Consensus 414 ~~GsL~~~l~~~~ 426 (457)
++|+|.++++..+
T Consensus 109 ~~~~L~~~l~~~~ 121 (327)
T 1fvr_A 109 PHGNLLDFLRKSR 121 (327)
T ss_dssp TTCBHHHHHHTTC
T ss_pred CCCCHHHHHHhcc
Confidence 9999999998653
No 297
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.28 E-value=1.8e-11 Score=117.27 Aligned_cols=83 Identities=29% Similarity=0.500 Sum_probs=70.6
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCch
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
.+.||+|+||.||+|.. .+|+.||||.+.... ..+.+.+|+.++.+++||||+++++++...+..++||||+++|+|
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 111 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSV 111 (314)
T ss_dssp EEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred heeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCH
Confidence 46899999999999994 569999999997643 456799999999999999999999999999999999999999999
Q ss_pred HHHhhh
Q 012745 419 FSLIHG 424 (457)
Q Consensus 419 ~~~l~~ 424 (457)
.+++..
T Consensus 112 ~~~~~~ 117 (314)
T 3com_A 112 SDIIRL 117 (314)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999974
No 298
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.27 E-value=7.2e-12 Score=121.16 Aligned_cols=86 Identities=27% Similarity=0.412 Sum_probs=74.4
Q ss_pred hcccccCCccEEEEEEe-cCC-----cEEEEEEccccCc-ccHHHHHHHHHHHccC-CCCCCCcceeeeecCCceEEEEE
Q 012745 340 AETLGRGTIGSTYKAVL-ESG-----FIVTVKRLKDARY-PRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKEERLLVYD 411 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g-----~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e 411 (457)
.+.||+|+||.||+|.. .++ ..||+|.+..... ...+.+.+|+.++.++ +||||++++++|...+..++|||
T Consensus 51 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 130 (333)
T 2i1m_A 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130 (333)
T ss_dssp EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEe
Confidence 47899999999999984 333 4899999976543 3456799999999999 89999999999999999999999
Q ss_pred ecCCCchHHHhhhC
Q 012745 412 YFPNGSLFSLIHGT 425 (457)
Q Consensus 412 y~~~GsL~~~l~~~ 425 (457)
|+++|+|.+++...
T Consensus 131 ~~~~g~L~~~l~~~ 144 (333)
T 2i1m_A 131 YCCYGDLLNFLRRK 144 (333)
T ss_dssp CCTTEEHHHHHHHH
T ss_pred cCCCCcHHHHHHHh
Confidence 99999999999863
No 299
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.27 E-value=7.3e-12 Score=119.17 Aligned_cols=104 Identities=22% Similarity=0.330 Sum_probs=78.9
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHcc--CCCCCCCcceeeeecCC----ceEEEEEec
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGR--LRHPNLVPLRAYFQAKE----ERLLVYDYF 413 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~----~~~lv~ey~ 413 (457)
.+.||+|+||.||+|... |+.||||++... ....+.+|.+++.. ++||||+++++++.... ..++||||+
T Consensus 8 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 83 (303)
T 3gxj_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 83 (303)
T ss_dssp CEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred hhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEecc
Confidence 467999999999999865 899999999753 35668888888887 79999999999998766 689999999
Q ss_pred CCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 414 PNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 414 ~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
++|+|.++++...- .. ....+.+.+++.++++.+
T Consensus 84 ~~g~L~~~l~~~~~-~~---~~~~~~~~~i~~~l~~lH 117 (303)
T 3gxj_A 84 EHGSLFDYLNRYTV-TV---EGMIKLALSTASGLAHLH 117 (303)
T ss_dssp TTCCHHHHHHHCCB-CC----CHHHHC-CHHHHHC-CC
T ss_pred CCCCHHHHHhccCc-ch---HHHHHHHHHHHHHHHHHH
Confidence 99999999987531 11 122233457888888776
No 300
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.27 E-value=9.4e-12 Score=120.73 Aligned_cols=108 Identities=26% Similarity=0.358 Sum_probs=83.5
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcc--------cHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEE
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYP--------RLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVY 410 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~--------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 410 (457)
.+.||+|+||.||+|. ..+++.||||+++..... ..+.+.+|+.++.+++||||++++++|...+..++||
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~ 108 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVM 108 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEE
Confidence 4689999999999998 567999999999765321 2335778999999999999999999999999999999
Q ss_pred EecCCC-chHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 411 DYFPNG-SLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 411 ey~~~G-sL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
||+.+| +|.+++........... .+.+.+++.+++++
T Consensus 109 e~~~~g~~l~~~~~~~~~l~~~~~---~~i~~qi~~~L~~L 146 (335)
T 3dls_A 109 EKHGSGLDLFAFIDRHPRLDEPLA---SYIFRQLVSAVGYL 146 (335)
T ss_dssp ECCTTSCBHHHHHHTCCCCCHHHH---HHHHHHHHHHHHHH
T ss_pred EeCCCCccHHHHHHhcCCCCHHHH---HHHHHHHHHHHHHH
Confidence 999877 99999987643222222 22334555555543
No 301
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.26 E-value=1.5e-11 Score=116.90 Aligned_cols=104 Identities=20% Similarity=0.304 Sum_probs=78.9
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHcc--CCCCCCCcceeeeecC----CceEEEEEec
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGR--LRHPNLVPLRAYFQAK----EERLLVYDYF 413 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~----~~~~lv~ey~ 413 (457)
.+.||+|+||.||+|.. +++.||||++... ..+.+..|.+++.. ++||||+++++++... ...++||||+
T Consensus 13 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~ 88 (301)
T 3q4u_A 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYH 88 (301)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred EEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhc
Confidence 46899999999999987 5899999999753 34566677777665 7999999999987543 4578999999
Q ss_pred CCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 414 PNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 414 ~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
++|+|.++++... .......+.+.+++.++++.+
T Consensus 89 ~~g~L~~~l~~~~----~~~~~~~~i~~~i~~~l~~lH 122 (301)
T 3q4u_A 89 EMGSLYDYLQLTT----LDTVSCLRIVLSIASGLAHLH 122 (301)
T ss_dssp TTCBHHHHHTTCC----BCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHhhcc----cCHHHHHHHHHHHHHHHHHHH
Confidence 9999999997543 112222334567777777665
No 302
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.26 E-value=9.3e-12 Score=120.36 Aligned_cols=107 Identities=16% Similarity=0.129 Sum_probs=82.2
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccC-CCCCCCcceeeeecCCceEEEEEecCCCc
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKEERLLVYDYFPNGS 417 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~~Gs 417 (457)
.+.||+|+||.||+|. ..+|+.||||.+.... ..+.+.+|+.++.++ +|+||+++++++...+..++||||+ +|+
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPS 90 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCC
Confidence 4689999999999999 5779999999987543 234588999999999 8999999999999999999999999 899
Q ss_pred hHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 418 LFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 418 L~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
|.+++..... ........+.+.|++.++++++
T Consensus 91 L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH 122 (330)
T 2izr_A 91 LEDLFDLCDR--TFSLKTVLMIAIQLISRMEYVH 122 (330)
T ss_dssp HHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999986421 1112222334456666665543
No 303
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.26 E-value=1.4e-11 Score=124.68 Aligned_cols=107 Identities=19% Similarity=0.247 Sum_probs=72.7
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecC-----CceEEEEE
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAK-----EERLLVYD 411 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~lv~e 411 (457)
.+.||+|+||.||+|. ..+++.||||++..... ...+.+.+|++++.+++|+|||+++++|... ...|+|||
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 137 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE 137 (458)
T ss_dssp CCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEC
T ss_pred eeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEe
Confidence 4689999999999998 56799999999976432 3456789999999999999999999998543 56899999
Q ss_pred ecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 412 YFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 412 y~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|+. |+|.++++............ .+.|++.+++++
T Consensus 138 ~~~-~~L~~~~~~~~~l~~~~~~~---~~~qi~~aL~~L 172 (458)
T 3rp9_A 138 IAD-SDFKKLFRTPVYLTELHIKT---LLYNLLVGVKYV 172 (458)
T ss_dssp CCS-EEHHHHHHSSCCCCHHHHHH---HHHHHHHHHHHH
T ss_pred ccc-cchhhhcccCCCCCHHHHHH---HHHHHHHHHHHH
Confidence 986 79999998754322222222 344555555553
No 304
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.26 E-value=2e-11 Score=117.51 Aligned_cols=111 Identities=20% Similarity=0.289 Sum_probs=76.7
Q ss_pred hcccccCCccEEEEEEec-CCc---EEEEEEccccC--cccHHHHHHHHHHHccCCCCCCCcceeeeecCCce------E
Q 012745 340 AETLGRGTIGSTYKAVLE-SGF---IVTVKRLKDAR--YPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEER------L 407 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~-~g~---~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~------~ 407 (457)
.+.||+|+||.||+|... ++. .||||.++... ....+.|.+|++++++++||||+++++++...+.. +
T Consensus 28 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 107 (323)
T 3qup_A 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPM 107 (323)
T ss_dssp EEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEE
T ss_pred eceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccE
Confidence 478999999999999853 333 79999997653 24467899999999999999999999999876654 9
Q ss_pred EEEEecCCCchHHHhhhCCCCC-CchhhH--HHHHHHHHHHHHHhc
Q 012745 408 LVYDYFPNGSLFSLIHGTCCLA-TRPLFI--FLFSFFRLIKKVFQM 450 (457)
Q Consensus 408 lv~ey~~~GsL~~~l~~~~~~~-~~~l~~--~~r~~~~i~~~v~~~ 450 (457)
+||||+++|+|.+++....... ...+++ ..+.+.|++.+++++
T Consensus 108 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~L 153 (323)
T 3qup_A 108 VILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL 153 (323)
T ss_dssp EEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997542111 111222 233445666665553
No 305
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.26 E-value=1.5e-11 Score=120.70 Aligned_cols=106 Identities=23% Similarity=0.360 Sum_probs=82.3
Q ss_pred cccccCCccEEEEEEe-cCCcEEEEEEccccCc--------ccHHHHHHHHHHHccC-CCCCCCcceeeeecCCceEEEE
Q 012745 341 ETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY--------PRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKEERLLVY 410 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--------~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 410 (457)
+.||+|+||.||+|.. .+|+.||||+++.... ...+.+.+|+.++.++ +||||+++++++......++||
T Consensus 100 ~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 179 (365)
T 2y7j_A 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVF 179 (365)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEE
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEE
Confidence 7899999999999995 5799999999875432 1134678999999999 7999999999999999999999
Q ss_pred EecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHh
Q 012745 411 DYFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQ 449 (457)
Q Consensus 411 ey~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~ 449 (457)
||+++|+|.+++............ ..+.|++.++.+
T Consensus 180 e~~~g~~L~~~l~~~~~l~~~~~~---~i~~qi~~~L~~ 215 (365)
T 2y7j_A 180 DLMRKGELFDYLTEKVALSEKETR---SIMRSLLEAVSF 215 (365)
T ss_dssp CCCTTCBHHHHHHHHSSCCHHHHH---HHHHHHHHHHHH
T ss_pred EeCCCCcHHHHHHhcCCCCHHHHH---HHHHHHHHHHHH
Confidence 999999999999865322222222 233455555544
No 306
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.26 E-value=1.7e-11 Score=117.36 Aligned_cols=87 Identities=22% Similarity=0.317 Sum_probs=73.8
Q ss_pred hcccccCCccEEEEEEe------cCCcEEEEEEccccCc-ccHHHHHHHHHHHccC-CCCCCCcceeeeecCC-ceEEEE
Q 012745 340 AETLGRGTIGSTYKAVL------ESGFIVTVKRLKDARY-PRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKE-ERLLVY 410 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~------~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~-~~~lv~ 410 (457)
.+.||+|+||.||+|.. .+++.||||.++.... ...+.+.+|+.++.++ +||||++++++|...+ ..++||
T Consensus 32 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~ 111 (316)
T 2xir_A 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 111 (316)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred eeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEE
Confidence 46899999999999973 3568999999986543 3346789999999999 7999999999987754 589999
Q ss_pred EecCCCchHHHhhhCC
Q 012745 411 DYFPNGSLFSLIHGTC 426 (457)
Q Consensus 411 ey~~~GsL~~~l~~~~ 426 (457)
||+++|+|.+++....
T Consensus 112 e~~~~~~L~~~l~~~~ 127 (316)
T 2xir_A 112 EFCKFGNLSTYLRSKR 127 (316)
T ss_dssp ECCTTEEHHHHHHTCT
T ss_pred EcCCCCcHHHHHHhcc
Confidence 9999999999998754
No 307
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.25 E-value=2.5e-11 Score=116.38 Aligned_cols=106 Identities=19% Similarity=0.265 Sum_probs=76.2
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeee--------------cCC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQ--------------AKE 404 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~--------------~~~ 404 (457)
.+.||+|+||.||+|.. .+++.||||++........+.+.+|+.++++++||||+++++++. ...
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~ 95 (320)
T 2i6l_A 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELN 95 (320)
T ss_dssp EEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCS
T ss_pred EEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccC
Confidence 36799999999999995 569999999997665455678999999999999999999998874 335
Q ss_pred ceEEEEEecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 405 ERLLVYDYFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 405 ~~~lv~ey~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
..++||||++ |+|.++++... ... ....+.+.|++.+++++
T Consensus 96 ~~~lv~e~~~-~~L~~~~~~~~-~~~---~~~~~~~~qi~~~l~~l 136 (320)
T 2i6l_A 96 SVYIVQEYME-TDLANVLEQGP-LLE---EHARLFMYQLLRGLKYI 136 (320)
T ss_dssp EEEEEEECCS-EEHHHHHTTCC-CCH---HHHHHHHHHHHHHHHHH
T ss_pred ceeEEeeccC-CCHHHHhhcCC-ccH---HHHHHHHHHHHHHHHHH
Confidence 6799999998 79999997643 121 22222334565555553
No 308
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.25 E-value=2e-11 Score=122.72 Aligned_cols=106 Identities=19% Similarity=0.253 Sum_probs=82.0
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecC-----CceEEEEE
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAK-----EERLLVYD 411 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~lv~e 411 (457)
.+.||+|+||.||+|. ..+++.||||++..... ...+.+.+|++++.+++|+|||++++++... ...|+|||
T Consensus 31 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e 110 (432)
T 3n9x_A 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLE 110 (432)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEe
Confidence 4689999999999999 56789999999976432 3456789999999999999999999998765 56899999
Q ss_pred ecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHh
Q 012745 412 YFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQ 449 (457)
Q Consensus 412 y~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~ 449 (457)
|++ |+|.++++............ .+.|++.++++
T Consensus 111 ~~~-~~L~~~~~~~~~l~~~~~~~---i~~qil~aL~~ 144 (432)
T 3n9x_A 111 IAD-SDLKKLFKTPIFLTEEHIKT---ILYNLLLGENF 144 (432)
T ss_dssp CCS-EEHHHHHHSSCCCCHHHHHH---HHHHHHHHHHH
T ss_pred cCC-cCHHHHHhccCCCCHHHHHH---HHHHHHHHHHH
Confidence 998 69999998754333223333 33455555544
No 309
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.25 E-value=7.6e-12 Score=122.39 Aligned_cols=108 Identities=23% Similarity=0.366 Sum_probs=83.6
Q ss_pred hcccccCCccEEEEEEe----cCCcEEEEEEccccCc----ccHHHHHHHHHHHccC-CCCCCCcceeeeecCCceEEEE
Q 012745 340 AETLGRGTIGSTYKAVL----ESGFIVTVKRLKDARY----PRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKEERLLVY 410 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~----~~g~~vavK~l~~~~~----~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 410 (457)
.+.||+|+||.||+|.. .+++.||||+++.... ...+.+.+|+.++.++ +|+||+++++++...+..++||
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 138 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL 138 (355)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEe
Confidence 46899999999999985 4689999999975431 2345677899999999 6999999999999999999999
Q ss_pred EecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 411 DYFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 411 ey~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
||+++|+|.+++............. .+.|++.+++++
T Consensus 139 e~~~~~~L~~~l~~~~~~~~~~~~~---~~~qi~~aL~~L 175 (355)
T 1vzo_A 139 DYINGGELFTHLSQRERFTEHEVQI---YVGEIVLALEHL 175 (355)
T ss_dssp CCCCSCBHHHHHHHHSCCCHHHHHH---HHHHHHHHHHHH
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHH---HHHHHHHHHHHH
Confidence 9999999999998754222222222 334566655554
No 310
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.24 E-value=2.7e-11 Score=116.74 Aligned_cols=109 Identities=21% Similarity=0.345 Sum_probs=83.3
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCcccHHHHHHHHHHHccC-CCCCCCcceeeeec------CCceEEEEE
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARYPRLEEFRRHMDILGRL-RHPNLVPLRAYFQA------KEERLLVYD 411 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~------~~~~~lv~e 411 (457)
.+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.++.++ +||||+++++++.. .+..++|||
T Consensus 29 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e 107 (326)
T 2x7f_A 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVME 107 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEE
T ss_pred EEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEE
Confidence 46899999999999994 679999999997543 3457799999999998 79999999999976 457899999
Q ss_pred ecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 412 YFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 412 y~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|+++|+|.+++...... .....+..+.+.+++.+++.+
T Consensus 108 ~~~~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~l 145 (326)
T 2x7f_A 108 FCGAGSVTDLIKNTKGN-TLKEEWIAYICREILRGLSHL 145 (326)
T ss_dssp CCTTEEHHHHHHHSGGG-CCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcHHHHHHhcccC-CCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999875311 112223333344555555553
No 311
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.24 E-value=3.3e-11 Score=115.38 Aligned_cols=106 Identities=22% Similarity=0.332 Sum_probs=78.7
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCc
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGS 417 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~Gs 417 (457)
.+.||+|+||.||+|... ..+|+|.++.... ...+.|.+|+.++.+++||||+++++++. .+..++||||+++|+
T Consensus 41 ~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~ 117 (307)
T 3lb7_A 41 STRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSS 117 (307)
T ss_dssp EEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCB
T ss_pred EeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCCCCc
Confidence 468999999999999864 3589998876443 33567999999999999999999999875 456899999999999
Q ss_pred hHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 418 LFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 418 L~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|.++++..... .......+.+.+++.+++++
T Consensus 118 L~~~l~~~~~~--~~~~~~~~i~~qi~~~L~~L 148 (307)
T 3lb7_A 118 LYKHLHVQETK--FQMFQLIDIARQTAQGMDYL 148 (307)
T ss_dssp HHHHHHTSCCC--CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccC--CCHHHHHHHHHHHHHHHHHH
Confidence 99999854321 11112222344566655553
No 312
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.24 E-value=2.7e-11 Score=117.49 Aligned_cols=112 Identities=20% Similarity=0.211 Sum_probs=82.1
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc-ccHHHHHHHHHH-HccCCCCCCCcceeeeecCCceEEEEEecCCC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY-PRLEEFRRHMDI-LGRLRHPNLVPLRAYFQAKEERLLVYDYFPNG 416 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~-~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~G 416 (457)
.+.||+|+||.||+|. ..+|+.||||+++.... ....++..|..+ +..++||||+++++++...+..++||||++ |
T Consensus 56 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 134 (340)
T 3an0_A 56 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-T 134 (340)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCS-E
T ss_pred eeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhh-C
Confidence 3679999999999999 56799999999976533 334556666665 788899999999999999999999999998 5
Q ss_pred chHHHhhhCCC-CCCchhhHHHHHHHHHHHHHHhcCc
Q 012745 417 SLFSLIHGTCC-LATRPLFIFLFSFFRLIKKVFQMSP 452 (457)
Q Consensus 417 sL~~~l~~~~~-~~~~~l~~~~r~~~~i~~~v~~~~~ 452 (457)
+|.+++..... ..........+.+.|++.++++++.
T Consensus 135 ~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~ 171 (340)
T 3an0_A 135 SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS 171 (340)
T ss_dssp EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 99998874210 0111122223345677777776653
No 313
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.24 E-value=3.3e-11 Score=117.21 Aligned_cols=107 Identities=15% Similarity=0.236 Sum_probs=83.1
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCC--CCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRH--PNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||++...+++.||||++..... ...+.|.+|+.++.+++| +||+++++++...+..++||| +.+
T Consensus 14 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 92 (343)
T 3dbq_A 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 92 (343)
T ss_dssp EEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCC
Confidence 368999999999999988899999999975432 334678999999999986 999999999999999999999 567
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|+|.+++........... ...+.|++.+++++
T Consensus 93 ~~L~~~l~~~~~~~~~~~---~~i~~qi~~al~~l 124 (343)
T 3dbq_A 93 IDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTI 124 (343)
T ss_dssp EEHHHHHHHSCCCCHHHH---HHHHHHHHHHHHHH
T ss_pred CCHHHHHHhcCCCCHHHH---HHHHHHHHHHHHHH
Confidence 899999997643222222 22334555555553
No 314
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.24 E-value=6.6e-12 Score=121.18 Aligned_cols=107 Identities=20% Similarity=0.329 Sum_probs=79.2
Q ss_pred cccccCCccEEEEEEe-cCCcEEEEEEccccCcc-cHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCch
Q 012745 341 ETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARYP-RLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
+.||+|+||.||+|.. .+++.||||+++..... ....+.+|+.++.+++||||+++++++...+..++||||++ |+|
T Consensus 8 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l 86 (324)
T 3mtl_A 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDL 86 (324)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-EEH
T ss_pred EEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-cCH
Confidence 5799999999999994 57999999999754321 12245689999999999999999999999999999999998 699
Q ss_pred HHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 419 FSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 419 ~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
.+++...... .........+.+++.++++.
T Consensus 87 ~~~~~~~~~~--~~~~~~~~~~~qi~~aL~~L 116 (324)
T 3mtl_A 87 KQYLDDCGNI--INMHNVKLFLFQLLRGLAYC 116 (324)
T ss_dssp HHHHHHTTTC--CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCC--CCHHHHHHHHHHHHHHHHHH
Confidence 9999875421 11122222334566655553
No 315
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.24 E-value=2e-11 Score=119.39 Aligned_cols=108 Identities=16% Similarity=0.240 Sum_probs=83.6
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCcccHHHHHHHHHHHccCC-----CCCCCcceeeeecCCceEEEEEec
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARYPRLEEFRRHMDILGRLR-----HPNLVPLRAYFQAKEERLLVYDYF 413 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----H~niv~l~~~~~~~~~~~lv~ey~ 413 (457)
.+.||+|+||.||+|.. .+++.||||+++... ...+.+..|+.++..+. |||||++++++...+..++||||+
T Consensus 40 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 118 (360)
T 3llt_A 40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL 118 (360)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC
T ss_pred EEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC
Confidence 46899999999999994 678999999997532 34566788999999886 999999999999999999999999
Q ss_pred CCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 414 PNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 414 ~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+|+|.+++...... ........+.+.|++.+++++
T Consensus 119 -~~~L~~~~~~~~~~-~~~~~~~~~i~~qi~~aL~~L 153 (360)
T 3llt_A 119 -GPSLYEIITRNNYN-GFHIEDIKLYCIEILKALNYL 153 (360)
T ss_dssp -CCBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHH
Confidence 89999999875421 112222333445666666654
No 316
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.23 E-value=4.8e-11 Score=113.39 Aligned_cols=109 Identities=24% Similarity=0.389 Sum_probs=81.1
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNG 416 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~G 416 (457)
.+.||+|+||.||+|.. .+|+.||||.++.... ...+.+.+|+.++.+++||||+++++++...+..++||||++ |
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 86 (299)
T 2r3i_A 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-Q 86 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred hhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-C
Confidence 36799999999999994 5799999999976432 234678899999999999999999999999999999999998 7
Q ss_pred chHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 417 SLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 417 sL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+|.+++...... ........+.+.+++.+++++
T Consensus 87 ~L~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~l 119 (299)
T 2r3i_A 87 DLKKFMDASALT-GIPLPLIKSYLFQLLQGLAFC 119 (299)
T ss_dssp EHHHHHHHTTTT-CCCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHhhhcc-CCCHHHHHHHHHHHHHHHHHH
Confidence 999999875311 111222233345566665554
No 317
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.23 E-value=2.5e-11 Score=116.32 Aligned_cols=106 Identities=17% Similarity=0.115 Sum_probs=79.1
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCc--ccHHHHHHHHHHHccC-CCCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY--PRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|.. .+|+.||||++..... .....+..|+..+.++ +|+|||+++++|...+..++||||+ +
T Consensus 62 ~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~ 140 (311)
T 3p1a_A 62 LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-G 140 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-C
T ss_pred eheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-C
Confidence 46899999999999995 5799999999866432 2334556666666555 8999999999999999999999999 5
Q ss_pred CchHHHhhhCCCCCCchhhHHH--HHHHHHHHHHHhc
Q 012745 416 GSLFSLIHGTCCLATRPLFIFL--FSFFRLIKKVFQM 450 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~--r~~~~i~~~v~~~ 450 (457)
|+|.+++..... .++|.. +.+.+++.+++++
T Consensus 141 ~~L~~~~~~~~~----~l~~~~~~~i~~qi~~aL~~L 173 (311)
T 3p1a_A 141 PSLQQHCEAWGA----SLPEAQVWGYLRDTLLALAHL 173 (311)
T ss_dssp CBHHHHHHHHCS----CCCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHH
Confidence 799999886431 233433 2345566666553
No 318
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.23 E-value=2.8e-11 Score=116.89 Aligned_cols=110 Identities=19% Similarity=0.305 Sum_probs=83.9
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCC-CCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLR-HPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|. ..+++.||||+++.... .....+.+|+.++..+. ||||++++++|...+..++||||+++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~ 113 (327)
T 3lm5_A 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAG 113 (327)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred cceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCC
Confidence 3789999999999999 45799999999976432 34678999999999995 69999999999999999999999999
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|+|.+++...... ........+.+.|++.+++.+
T Consensus 114 ~~L~~~~~~~~~~-~~~~~~~~~i~~ql~~~L~~L 147 (327)
T 3lm5_A 114 GEIFSLCLPELAE-MVSENDVIRLIKQILEGVYYL 147 (327)
T ss_dssp EEGGGGGSSCC-C-CCCHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHH
Confidence 9999998654211 111122223344566655553
No 319
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.23 E-value=2.9e-11 Score=118.81 Aligned_cols=105 Identities=22% Similarity=0.345 Sum_probs=74.1
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCC------ceEEEE
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKE------ERLLVY 410 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~~~lv~ 410 (457)
.+.||+|+||.||+|. ..+|+.||||++..... ...+.+.+|+.+++.++||||+++++++...+ ..|+||
T Consensus 30 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 109 (367)
T 1cm8_A 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVM 109 (367)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEE
T ss_pred eEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEE
Confidence 3679999999999999 46799999999965432 23467889999999999999999999997653 459999
Q ss_pred EecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHh
Q 012745 411 DYFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQ 449 (457)
Q Consensus 411 ey~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~ 449 (457)
||+ +++|.++++... .......+.. .|++.++++
T Consensus 110 e~~-~~~L~~~~~~~~-l~~~~~~~~~---~qi~~~L~~ 143 (367)
T 1cm8_A 110 PFM-GTDLGKLMKHEK-LGEDRIQFLV---YQMLKGLRY 143 (367)
T ss_dssp ECC-SEEHHHHHHHCC-CCHHHHHHHH---HHHHHHHHH
T ss_pred ecC-CCCHHHHHhcCC-CCHHHHHHHH---HHHHHHHHH
Confidence 999 789999998743 2222333333 455555554
No 320
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.22 E-value=3.3e-11 Score=116.46 Aligned_cols=105 Identities=21% Similarity=0.311 Sum_probs=80.6
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccC--CCCCCCcceeeeecC----CceEEEEEec
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRL--RHPNLVPLRAYFQAK----EERLLVYDYF 413 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l--~H~niv~l~~~~~~~----~~~~lv~ey~ 413 (457)
.+.||+|+||.||+|... ++.||||++... ....+..|.+++... +|+||+++++++... ...++||||+
T Consensus 42 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 117 (337)
T 3mdy_A 42 VKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYH 117 (337)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCC
T ss_pred EeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEecc
Confidence 578999999999999875 899999998653 244556666666654 899999999999876 6789999999
Q ss_pred CCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcCc
Q 012745 414 PNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMSP 452 (457)
Q Consensus 414 ~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~~ 452 (457)
++|+|.++++... .......+.+.+++.++++.+.
T Consensus 118 ~~g~L~~~l~~~~----~~~~~~~~i~~~i~~~l~~lH~ 152 (337)
T 3mdy_A 118 ENGSLYDYLKSTT----LDAKSMLKLAYSSVSGLCHLHT 152 (337)
T ss_dssp TTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCcHHHHhhccC----CCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998753 1122333345677777776553
No 321
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.22 E-value=1.7e-11 Score=118.48 Aligned_cols=111 Identities=21% Similarity=0.276 Sum_probs=81.6
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccCC-CCCCCcceeeee--------cCCceEEE
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRLR-HPNLVPLRAYFQ--------AKEERLLV 409 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~--------~~~~~~lv 409 (457)
.+.||+|+||.||+|. ..+++.||||++........+.+.+|+.++.++. ||||+++++++. .....++|
T Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv 112 (337)
T 3ll6_A 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLL 112 (337)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEE
T ss_pred EEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEE
Confidence 4689999999999999 4679999999997665455677999999999996 999999999984 23347899
Q ss_pred EEecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 410 YDYFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 410 ~ey~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
|||++ |+|.++++..............+.+.+++.++++++
T Consensus 113 ~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 153 (337)
T 3ll6_A 113 TELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153 (337)
T ss_dssp EECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99997 899999875221111111222234456666666544
No 322
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.22 E-value=4.6e-11 Score=118.38 Aligned_cols=108 Identities=15% Similarity=0.226 Sum_probs=83.3
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCC--CCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLR--HPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|...+++.||||++..... ...+.|.+|+.++.+++ |+|||++++++...+..++||| +.+
T Consensus 61 ~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~ 139 (390)
T 2zmd_A 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 139 (390)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCS
T ss_pred EEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCC
Confidence 468999999999999977799999999975432 34567999999999996 5999999999999999999999 567
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
|+|.+++.......... ..+.+.|++.++++++
T Consensus 140 ~~L~~~l~~~~~~~~~~---~~~i~~qi~~aL~~lH 172 (390)
T 2zmd_A 140 IDLNSWLKKKKSIDPWE---RKSYWKNMLEAVHTIH 172 (390)
T ss_dssp EEHHHHHHHCSSCCHHH---HHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHhcCCCCHHH---HHHHHHHHHHHHHHHH
Confidence 89999998764222111 2223445666665543
No 323
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.22 E-value=1.7e-13 Score=138.65 Aligned_cols=154 Identities=17% Similarity=0.144 Sum_probs=109.7
Q ss_pred CcEeEEEeCCCCCccc----cChhhhcCCCCCCEEEeecCccccc-----CCCCcCCCCCcEEEccCCccccCCCccCC-
Q 012745 49 GRVTKLVLEHLNLTGT----LDEKVINQLDQLRVLSFKGNSISGQ-----IPNLLGLVNLKSLYLNDNNFSGKFPGSLS- 118 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~----l~~~~~~~l~~L~~L~L~~N~l~~~-----~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~- 118 (457)
++|++|+|++|.+.+. +.+..+..+++|+.|+|++|.|+.. ...+..+++|++|+|++|.+++..+..+.
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 6799999999988732 2233344688999999999998863 23566788999999999988754333332
Q ss_pred ----CCCCCCEEEeeccccCCC----CcccccCCCccceeecccccccCCCCCC-------CCCCCcEEEeecCccee--
Q 012745 119 ----SLHRLKIIVLANNQISGP----IPESLSNLKRLYMLYLQDNKFTGPIPPF-------NQTNLRFFNVSNNDLSG-- 181 (457)
Q Consensus 119 ----~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~~~~-------~~~~L~~L~l~~N~l~~-- 181 (457)
..++|+.|+|++|.+++. ++..+..+++|++|+|++|.+++..+.. ..++|+.|+|++|.+++
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~ 386 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSS 386 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHH
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhh
Confidence 236899999999988755 4556677889999999999887543221 25688999999998884
Q ss_pred --cCC-CchhhhccCccccccCcC
Q 012745 182 --QIP-VTPALVRFNASSFLLNIN 202 (457)
Q Consensus 182 --~~p-~~~~l~~l~~~~~~~n~~ 202 (457)
.+| ....++++..+.+.+|..
T Consensus 387 ~~~l~~~l~~~~~L~~L~l~~N~i 410 (461)
T 1z7x_W 387 CSSLAATLLANHSLRELDLSNNCL 410 (461)
T ss_dssp HHHHHHHHHHCCCCCEEECCSSSC
T ss_pred HHHHHHHHHhCCCccEEECCCCCC
Confidence 333 223346677777777764
No 324
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.22 E-value=3.8e-11 Score=116.43 Aligned_cols=104 Identities=22% Similarity=0.341 Sum_probs=82.2
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHcc--CCCCCCCcceeeeecCC----ceEEEEEec
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGR--LRHPNLVPLRAYFQAKE----ERLLVYDYF 413 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~----~~~lv~ey~ 413 (457)
.+.||+|+||.||+|... |+.||||.+... ..+.+.+|.+++.. ++||||+++++++.... ..++||||+
T Consensus 47 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~ 122 (342)
T 1b6c_B 47 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 122 (342)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCC
T ss_pred EeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeec
Confidence 578999999999999874 899999999753 35678889888877 78999999999998765 789999999
Q ss_pred CCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 414 PNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 414 ~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
++|+|.++++... .. .....+.+.+++.++++.+
T Consensus 123 ~~g~L~~~l~~~~-~~---~~~~~~i~~~i~~~l~~lH 156 (342)
T 1b6c_B 123 EHGSLFDYLNRYT-VT---VEGMIKLALSTASGLAHLH 156 (342)
T ss_dssp TTCBHHHHHHHCC-BC---HHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHhccC-cc---HHHHHHHHHHHHHHHHHHH
Confidence 9999999998753 11 2222234456777766655
No 325
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.22 E-value=3.2e-11 Score=113.46 Aligned_cols=83 Identities=27% Similarity=0.452 Sum_probs=71.2
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecC-CceEEEEEecCCCch
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAK-EERLLVYDYFPNGSL 418 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~lv~ey~~~GsL 418 (457)
.+.||+|+||.||+|... |+.||||.++... ..+.|.+|+.++.+++||||+++++++... +..++||||+++|+|
T Consensus 26 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L 102 (278)
T 1byg_A 26 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 102 (278)
T ss_dssp EEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEH
T ss_pred EeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCH
Confidence 468999999999999875 8899999997643 457799999999999999999999987654 478999999999999
Q ss_pred HHHhhhC
Q 012745 419 FSLIHGT 425 (457)
Q Consensus 419 ~~~l~~~ 425 (457)
.+++...
T Consensus 103 ~~~l~~~ 109 (278)
T 1byg_A 103 VDYLRSR 109 (278)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9999864
No 326
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.22 E-value=3e-11 Score=114.47 Aligned_cols=106 Identities=19% Similarity=0.288 Sum_probs=77.8
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCc
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGS 417 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~Gs 417 (457)
.+.||+|+||.||+|... ..||||+++.... ...+.|.+|+.++++++|+||+++++++ ..+..++||||+++|+
T Consensus 29 ~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~ 105 (289)
T 3og7_A 29 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSS 105 (289)
T ss_dssp EEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEE
T ss_pred eeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCc
Confidence 468999999999999864 3599999976543 3356799999999999999999999965 4566899999999999
Q ss_pred hHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 418 LFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 418 L~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|.++++..... .......+.+.+++.+++..
T Consensus 106 L~~~l~~~~~~--~~~~~~~~i~~qi~~~L~~l 136 (289)
T 3og7_A 106 LYHHLHASETK--FEMKKLIDIARQTARGMDYL 136 (289)
T ss_dssp HHHHHTTC-----CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccCC--CCHHHHHHHHHHHHHHHHHH
Confidence 99999764311 11122223344555555543
No 327
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.22 E-value=5.5e-11 Score=113.87 Aligned_cols=112 Identities=19% Similarity=0.292 Sum_probs=78.2
Q ss_pred hcccccCCccEEEEEEec----CCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCC-----ceEE
Q 012745 340 AETLGRGTIGSTYKAVLE----SGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKE-----ERLL 408 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~l 408 (457)
.+.||+|+||.||+|... ++..||||.++.... ...+.|.+|+.++.+++||||+++++++...+ ..++
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 118 (313)
T 3brb_A 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMV 118 (313)
T ss_dssp EEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEE
T ss_pred ccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEE
Confidence 468999999999999843 355899999976532 33467999999999999999999999997754 3499
Q ss_pred EEEecCCCchHHHhhhCCCC-CCchhh--HHHHHHHHHHHHHHhcC
Q 012745 409 VYDYFPNGSLFSLIHGTCCL-ATRPLF--IFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 409 v~ey~~~GsL~~~l~~~~~~-~~~~l~--~~~r~~~~i~~~v~~~~ 451 (457)
||||+++|+|.+++...... ....++ ...+.+.+++.++++++
T Consensus 119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH 164 (313)
T 3brb_A 119 ILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS 164 (313)
T ss_dssp EEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999643211 111222 23334456666665543
No 328
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.22 E-value=2.8e-11 Score=114.02 Aligned_cols=104 Identities=24% Similarity=0.309 Sum_probs=79.4
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeec----------------
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQA---------------- 402 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~---------------- 402 (457)
.+.||+|+||.||+|.. .+++.||+|.++... +.+.+|++++.+++||||+++++++..
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSK 91 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCE
T ss_pred eeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccC
Confidence 46899999999999995 479999999997643 357789999999999999999998854
Q ss_pred CCceEEEEEecCCCchHHHhhhCCCCCCchhhHH--HHHHHHHHHHHHhc
Q 012745 403 KEERLLVYDYFPNGSLFSLIHGTCCLATRPLFIF--LFSFFRLIKKVFQM 450 (457)
Q Consensus 403 ~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~l~~~--~r~~~~i~~~v~~~ 450 (457)
....++||||+++|+|.++++..... .+++. .+.+.+++.+++++
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~i~~qi~~~l~~l 138 (284)
T 2a19_B 92 TKCLFIQMEFCDKGTLEQWIEKRRGE---KLDKVLALELFEQITKGVDYI 138 (284)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHGGGS---CCCHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEEeccCCCCHHHHHhhccCC---CCCHHHHHHHHHHHHHHHHHH
Confidence 34578999999999999999864311 12222 22344565555553
No 329
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.21 E-value=3.1e-11 Score=118.17 Aligned_cols=86 Identities=23% Similarity=0.368 Sum_probs=71.8
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCcc-----------cHHHHHHHHHHHccCCCCCCCcceeeeecC-----
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARYP-----------RLEEFRRHMDILGRLRHPNLVPLRAYFQAK----- 403 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~-----------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~----- 403 (457)
.+.||+|+||.||+|...+|+.||||++...... ..+.+.+|+.++.+++||||+++++++...
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 106 (362)
T 3pg1_A 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAM 106 (362)
T ss_dssp EEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTC
T ss_pred eEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCc
Confidence 4689999999999999777999999999654321 136799999999999999999999998542
Q ss_pred CceEEEEEecCCCchHHHhhhCC
Q 012745 404 EERLLVYDYFPNGSLFSLIHGTC 426 (457)
Q Consensus 404 ~~~~lv~ey~~~GsL~~~l~~~~ 426 (457)
...++||||++ |+|.+++....
T Consensus 107 ~~~~lv~e~~~-~~l~~~~~~~~ 128 (362)
T 3pg1_A 107 HKLYLVTELMR-TDLAQVIHDQR 128 (362)
T ss_dssp CEEEEEEECCS-EEHHHHHHCTT
T ss_pred ceEEEEEccCC-CCHHHHHHhcc
Confidence 35799999999 79999988653
No 330
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.21 E-value=5.7e-11 Score=112.28 Aligned_cols=112 Identities=18% Similarity=0.138 Sum_probs=78.2
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc-ccH-HHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY-PRL-EEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNG 416 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~-~~~-~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~G 416 (457)
.+.||+|+||.||+|. ..+|+.||||+++.... ... +.+..+...++.++||||+++++++...+..++||||++ |
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 90 (290)
T 3fme_A 12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-T 90 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-E
T ss_pred HHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-c
Confidence 4679999999999999 56799999999976533 222 334455556888999999999999999999999999998 6
Q ss_pred chHHHhhhCCC-CCCchhhHHHHHHHHHHHHHHhcCc
Q 012745 417 SLFSLIHGTCC-LATRPLFIFLFSFFRLIKKVFQMSP 452 (457)
Q Consensus 417 sL~~~l~~~~~-~~~~~l~~~~r~~~~i~~~v~~~~~ 452 (457)
+|.++++.... ..........+.+.|++.++++.+.
T Consensus 91 ~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 127 (290)
T 3fme_A 91 SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS 127 (290)
T ss_dssp EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 99888764210 0111122222344566666666553
No 331
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.21 E-value=7e-11 Score=111.28 Aligned_cols=86 Identities=26% Similarity=0.417 Sum_probs=71.8
Q ss_pred hcccccCCccEEEEEEecC----CcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecC
Q 012745 340 AETLGRGTIGSTYKAVLES----GFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFP 414 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~----g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 414 (457)
.+.||+|+||.||+|.... +..||||.+..... ...+.|.+|+.++.+++||||+++++++.. +..++||||++
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 95 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYP 95 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecCC
Confidence 4689999999999998432 34699999987533 345679999999999999999999999864 45689999999
Q ss_pred CCchHHHhhhCC
Q 012745 415 NGSLFSLIHGTC 426 (457)
Q Consensus 415 ~GsL~~~l~~~~ 426 (457)
+|+|.++++...
T Consensus 96 ~~~L~~~l~~~~ 107 (281)
T 3cc6_A 96 YGELGHYLERNK 107 (281)
T ss_dssp TCBHHHHHHHHT
T ss_pred CCCHHHHHHhcc
Confidence 999999998643
No 332
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.21 E-value=1.3e-13 Score=139.64 Aligned_cols=154 Identities=19% Similarity=0.167 Sum_probs=118.1
Q ss_pred CCcEeEEEeCCCCCccc----cChhhhcCCCCCCEEEeecCcccccC-----C-CCcCCCCCcEEEccCCccccC----C
Q 012745 48 NGRVTKLVLEHLNLTGT----LDEKVINQLDQLRVLSFKGNSISGQI-----P-NLLGLVNLKSLYLNDNNFSGK----F 113 (457)
Q Consensus 48 ~~~l~~L~L~~n~l~~~----l~~~~~~~l~~L~~L~L~~N~l~~~~-----~-~~~~l~~L~~L~Ls~N~l~~~----~ 113 (457)
.++|++|+|++|.+++. ++. .+..+++|+.|+|++|.++... + .+..+++|++|+|++|+++.. +
T Consensus 198 ~~~L~~L~L~~n~l~~~~~~~l~~-~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l 276 (461)
T 1z7x_W 198 PCQLEALKLESCGVTSDNCRDLCG-IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDL 276 (461)
T ss_dssp CCCCCEEECTTSCCBTTHHHHHHH-HHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHH
T ss_pred CCCceEEEccCCCCcHHHHHHHHH-HHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHH
Confidence 35899999999999942 443 7788999999999999998643 2 234689999999999999964 5
Q ss_pred CccCCCCCCCCEEEeeccccCCCCcccccC-----CCccceeecccccccCCC----CCC--CCCCCcEEEeecCcceec
Q 012745 114 PGSLSSLHRLKIIVLANNQISGPIPESLSN-----LKRLYMLYLQDNKFTGPI----PPF--NQTNLRFFNVSNNDLSGQ 182 (457)
Q Consensus 114 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~~~----~~~--~~~~L~~L~l~~N~l~~~ 182 (457)
+..+..+++|++|+|++|.+++..+..+.. .++|++|+|++|.+++.. +.. .+++|+.|+|++|.+++.
T Consensus 277 ~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~ 356 (461)
T 1z7x_W 277 CRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 356 (461)
T ss_dssp HHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHH
T ss_pred HHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccc
Confidence 677888999999999999997554444433 379999999999998642 222 568999999999999865
Q ss_pred CCC-c-hh----hhccCccccccCcC
Q 012745 183 IPV-T-PA----LVRFNASSFLLNIN 202 (457)
Q Consensus 183 ~p~-~-~~----l~~l~~~~~~~n~~ 202 (457)
.+. . .. ...+..+.+.+|..
T Consensus 357 ~~~~l~~~l~~~~~~L~~L~L~~n~i 382 (461)
T 1z7x_W 357 GVRELCQGLGQPGSVLRVLWLADCDV 382 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred cHHHHHHHHcCCCCceEEEECCCCCC
Confidence 331 1 11 33677888888753
No 333
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.21 E-value=5.1e-11 Score=125.85 Aligned_cols=109 Identities=16% Similarity=0.284 Sum_probs=82.4
Q ss_pred hcccccCCccEEEEEEec----CCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecC
Q 012745 340 AETLGRGTIGSTYKAVLE----SGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFP 414 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~ 414 (457)
.+.||+|+||.||+|... .+..||||.++.... ...+.|.+|+.++.+++|||||++++++. .+..++||||++
T Consensus 395 ~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~~ 473 (656)
T 2j0j_A 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCT 473 (656)
T ss_dssp EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred eeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcCC
Confidence 568999999999999853 256899999976543 33467999999999999999999999984 466899999999
Q ss_pred CCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 415 NGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 415 ~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
+|+|.++++.... ..........+.|++.++++++
T Consensus 474 ~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH 508 (656)
T 2j0j_A 474 LGELRSFLQVRKF--SLDLASLILYAYQLSTALAYLE 508 (656)
T ss_dssp TCBHHHHHHHTTT--TCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999986531 1112222334456666666543
No 334
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.20 E-value=3.3e-11 Score=114.77 Aligned_cols=104 Identities=17% Similarity=0.202 Sum_probs=78.8
Q ss_pred cccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHH-ccCCCCCCCcceeeeec----CCceEEEEEecC
Q 012745 341 ETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDIL-GRLRHPNLVPLRAYFQA----KEERLLVYDYFP 414 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~----~~~~~lv~ey~~ 414 (457)
++||+|+||.||+|. ..+++.||||+++. ...+.+|+.++ ...+||||+++++++.. ....++||||++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 98 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 98 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecC
Confidence 679999999999999 46799999999964 24577888887 55689999999999876 567899999999
Q ss_pred CCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 415 NGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 415 ~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+|+|.+++...... ........+.+.+++.+++++
T Consensus 99 ~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~l 133 (299)
T 3m2w_A 99 GGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYL 133 (299)
T ss_dssp SCBHHHHHHHCTTC-CCBHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHH
Confidence 99999999875311 111222233445666666553
No 335
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.20 E-value=4.8e-11 Score=115.30 Aligned_cols=108 Identities=19% Similarity=0.271 Sum_probs=80.3
Q ss_pred hcccccCCccEEEEEE-ecCCcE----EEEEEccccC-cccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEec
Q 012745 340 AETLGRGTIGSTYKAV-LESGFI----VTVKRLKDAR-YPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYF 413 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~----vavK~l~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 413 (457)
.+.||+|+||.||+|. ..+++. ||+|.+.... ....+.+.+|+.++.+++||||++++++|.... .++|+||+
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~ 98 (327)
T 3lzb_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLM 98 (327)
T ss_dssp EEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCC
T ss_pred EEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEec
Confidence 4689999999999998 445553 5778776543 245678999999999999999999999998654 78999999
Q ss_pred CCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 414 PNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 414 ~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
++|+|.++++..... .......+.+.|++.+++++
T Consensus 99 ~~g~L~~~l~~~~~~--~~~~~~~~i~~qi~~aL~~L 133 (327)
T 3lzb_A 99 PFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYL 133 (327)
T ss_dssp SSCBHHHHHHHTTTC--CCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHH
Confidence 999999999875421 11222233344566655553
No 336
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.20 E-value=2.9e-11 Score=120.19 Aligned_cols=104 Identities=17% Similarity=0.192 Sum_probs=76.5
Q ss_pred cccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHc-cCCCCCCCcceeeeec----CCceEEEEEecC
Q 012745 341 ETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILG-RLRHPNLVPLRAYFQA----KEERLLVYDYFP 414 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~-~l~H~niv~l~~~~~~----~~~~~lv~ey~~ 414 (457)
++||+|+||.||+|. ..+|+.||||+++. ...+.+|++++. ..+||||++++++|.. .+..|+||||++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 579999999999999 56799999999964 245778888874 4589999999998865 456899999999
Q ss_pred CCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 415 NGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 415 ~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+|+|.++++..... ........+.+.+++.+++++
T Consensus 143 gg~L~~~l~~~~~~-~l~~~~~~~i~~qi~~aL~~L 177 (400)
T 1nxk_A 143 GGELFSRIQDRGDQ-AFTEREASEIMKSIGEAIQYL 177 (400)
T ss_dssp SEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHH
Confidence 99999999875311 111122223445666666554
No 337
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.20 E-value=3.4e-11 Score=116.12 Aligned_cols=85 Identities=28% Similarity=0.445 Sum_probs=69.9
Q ss_pred hcccccCCccEEEEEE-ecCCcE----EEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEec
Q 012745 340 AETLGRGTIGSTYKAV-LESGFI----VTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYF 413 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~----vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 413 (457)
.+.||+|+||.||+|. ..+++. ||+|.+..... ...+.+.+|+.++.+++|||||+++++|. .+..++||||+
T Consensus 18 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 96 (325)
T 3kex_A 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYL 96 (325)
T ss_dssp EEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECC
T ss_pred eeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeC
Confidence 4689999999999998 445554 78888754432 33456789999999999999999999886 45689999999
Q ss_pred CCCchHHHhhhC
Q 012745 414 PNGSLFSLIHGT 425 (457)
Q Consensus 414 ~~GsL~~~l~~~ 425 (457)
++|+|.++++..
T Consensus 97 ~~~~L~~~l~~~ 108 (325)
T 3kex_A 97 PLGSLLDHVRQH 108 (325)
T ss_dssp TTCBSHHHHHSS
T ss_pred CCCCHHHHHHHc
Confidence 999999999875
No 338
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.20 E-value=6.6e-11 Score=115.22 Aligned_cols=109 Identities=24% Similarity=0.382 Sum_probs=79.7
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCcc-----cHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEec
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARYP-----RLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYF 413 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~ 413 (457)
.+.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|+.++.+++||||++++++|...+..++||||+
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 94 (346)
T 1ua2_A 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 94 (346)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcC
Confidence 46899999999999994 56999999999754321 1246889999999999999999999999999999999999
Q ss_pred CCCchHHHhhhCCC-CCCchhhHHHHHHHHHHHHHHh
Q 012745 414 PNGSLFSLIHGTCC-LATRPLFIFLFSFFRLIKKVFQ 449 (457)
Q Consensus 414 ~~GsL~~~l~~~~~-~~~~~l~~~~r~~~~i~~~v~~ 449 (457)
++ +|.+++..... ..........+++++.+..++.
T Consensus 95 ~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 130 (346)
T 1ua2_A 95 ET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ 130 (346)
T ss_dssp SE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHH
T ss_pred CC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 95 89999886532 2233333344434444444444
No 339
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.20 E-value=4.7e-11 Score=113.79 Aligned_cols=109 Identities=22% Similarity=0.303 Sum_probs=78.4
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccC----cccHHHHHHHHHHHccCCCCCCCcceeeee--cCCceEEEEEe
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDAR----YPRLEEFRRHMDILGRLRHPNLVPLRAYFQ--AKEERLLVYDY 412 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~--~~~~~~lv~ey 412 (457)
.+.||+|+||.||++.. .+++.||||+++... ....+.+.+|+.++.+++|+||+++++++. ..+..++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 89 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEY 89 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEEC
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehh
Confidence 36799999999999994 678999999997642 134567999999999999999999999984 34578999999
Q ss_pred cCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 413 FPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 413 ~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+++| |.+++...... ........+.+.|++.++++.
T Consensus 90 ~~~~-l~~~~~~~~~~-~~~~~~~~~~~~qi~~al~~L 125 (305)
T 2wtk_C 90 CVCG-MQEMLDSVPEK-RFPVCQAHGYFCQLIDGLEYL 125 (305)
T ss_dssp CSEE-HHHHHHHSTTC-SCCHHHHHHHHHHHHHHHHHH
T ss_pred ccCC-HHHHHHhCccc-ccCHHHHHHHHHHHHHHHHHH
Confidence 9976 77877754311 111222223344566655553
No 340
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.20 E-value=6e-11 Score=115.60 Aligned_cols=108 Identities=23% Similarity=0.287 Sum_probs=80.8
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecC--------CceEE
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAK--------EERLL 408 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--------~~~~l 408 (457)
.+.||+|+||.||+|.. .+|+.||||++..... .....+.+|+.++.+++||||++++++|... +..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~l 101 (351)
T 3mi9_A 22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 101 (351)
T ss_dssp EEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEE
T ss_pred EEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEE
Confidence 46899999999999994 6799999999965533 3356788999999999999999999999763 45799
Q ss_pred EEEecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 409 VYDYFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 409 v~ey~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
||||++ |+|.+.+...... .......+.+.|++.+++++
T Consensus 102 v~e~~~-~~l~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~L 140 (351)
T 3mi9_A 102 VFDFCE-HDLAGLLSNVLVK--FTLSEIKRVMQMLLNGLYYI 140 (351)
T ss_dssp EEECCS-EEHHHHHHCTTSC--CCHHHHHHHHHHHHHHHHHH
T ss_pred EEeccC-CCHHHHHhhccCC--CCHHHHHHHHHHHHHHHHHH
Confidence 999999 5888888764311 12222333445566665553
No 341
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.20 E-value=4e-11 Score=127.05 Aligned_cols=108 Identities=20% Similarity=0.248 Sum_probs=84.8
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccC---cccHHHHHHHHHHHccC-CCCCCCcceeeeecCCceEEEEEecC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDAR---YPRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKEERLLVYDYFP 414 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~ 414 (457)
.+.||+|+||.||+|. ..+++.||||+++... ....+.+..|..++..+ +|++|+++++++.+.+..|+||||++
T Consensus 346 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~ 425 (674)
T 3pfq_A 346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 425 (674)
T ss_dssp EEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcC
Confidence 4689999999999999 5678999999997542 23456788999999988 79999999999999999999999999
Q ss_pred CCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 415 NGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 415 ~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+|+|.++++......+. .....+.|++.++.++
T Consensus 426 gg~L~~~l~~~~~~~~~---~~~~~~~qi~~aL~~L 458 (674)
T 3pfq_A 426 GGDLMYHIQQVGRFKEP---HAVFYAAEIAIGLFFL 458 (674)
T ss_dssp SCBHHHHHHHHSSCCHH---HHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHhcCCCCHH---HHHHHHHHHHHHHHHH
Confidence 99999999875422222 2223445666666654
No 342
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.19 E-value=5.2e-11 Score=115.13 Aligned_cols=132 Identities=19% Similarity=0.221 Sum_probs=91.1
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcC--------------------------------
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLG-------------------------------- 95 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~-------------------------------- 95 (457)
++|++|+|.+ +++ .|++..|.++++|+.|+|++|.++.+.+ .|.+
T Consensus 101 ~~L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 101 QTLEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp TTCCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred CCCcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 5789999998 888 8888899999999999999998754443 3332
Q ss_pred ----------------------------------------------CCCCcEEEccCCccccCCCccCCCCCCCCEEEee
Q 012745 96 ----------------------------------------------LVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLA 129 (457)
Q Consensus 96 ----------------------------------------------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 129 (457)
+++|+.|+|++|+++.+.+..|.++.+|+.|+|.
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 4567777777777775555667777777777777
Q ss_pred ccccCCCCcccccCCCccc-eeecccccccCCCCCC--CCCCCcEEEeecCcceecCC
Q 012745 130 NNQISGPIPESLSNLKRLY-MLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIP 184 (457)
Q Consensus 130 ~N~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p 184 (457)
+| ++.+.+..|..+++|+ .|++.+ .++.+.+.. .+++|+.|++++|.++...+
T Consensus 259 ~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~ 314 (329)
T 3sb4_A 259 HN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGD 314 (329)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECT
T ss_pred cc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccch
Confidence 76 6555566677777777 777766 555443333 56677777777776665544
No 343
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.19 E-value=5.9e-11 Score=120.31 Aligned_cols=105 Identities=16% Similarity=0.279 Sum_probs=78.1
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccC--cccHHHHHHHHHHHccCCCCCCCcceeeeecC------CceEEEE
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDAR--YPRLEEFRRHMDILGRLRHPNLVPLRAYFQAK------EERLLVY 410 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~~lv~ 410 (457)
.+.||+|+||.||+|. ..+++.||||++.... ....+.+.+|+.+++.++|||||++++++... ...|+||
T Consensus 67 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 146 (464)
T 3ttj_A 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 146 (464)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEE
Confidence 4689999999999998 5679999999997642 23456788999999999999999999999654 3569999
Q ss_pred EecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 411 DYFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 411 ey~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|||++ +|.+.++..- ......+..+ |++.+++++
T Consensus 147 E~~~~-~l~~~~~~~l--~~~~~~~~~~---qil~aL~~l 180 (464)
T 3ttj_A 147 ELMDA-NLCQVIQMEL--DHERMSYLLY---QMLCGIKHL 180 (464)
T ss_dssp ECCSE-EHHHHHTSCC--CHHHHHHHHH---HHHHHHHHH
T ss_pred eCCCC-CHHHHHhhcC--CHHHHHHHHH---HHHHHHHHH
Confidence 99985 6777776531 2223333344 555555443
No 344
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.19 E-value=6.9e-11 Score=116.94 Aligned_cols=106 Identities=28% Similarity=0.452 Sum_probs=72.4
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCC-CCCCCcceeeeecCC--ceEEEEEec
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLR-HPNLVPLRAYFQAKE--ERLLVYDYF 413 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~--~~~lv~ey~ 413 (457)
.+.||+|+||.||+|. ..+|+.||||++..... ...+.+.+|+.++.++. |+|||++++++...+ ..|+|||||
T Consensus 14 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~ 93 (388)
T 3oz6_A 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93 (388)
T ss_dssp EEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECC
T ss_pred EEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEeccc
Confidence 3689999999999998 56799999999965432 34566889999999997 999999999997544 689999999
Q ss_pred CCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 414 PNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 414 ~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+ |+|.++++... .......+.. .|++.+++++
T Consensus 94 ~-~~L~~~~~~~~-~~~~~~~~i~---~qi~~~L~~L 125 (388)
T 3oz6_A 94 E-TDLHAVIRANI-LEPVHKQYVV---YQLIKVIKYL 125 (388)
T ss_dssp S-EEHHHHHHHTC-CCHHHHHHHH---HHHHHHHHHH
T ss_pred C-cCHHHHHHcCC-CCHHHHHHHH---HHHHHHHHHH
Confidence 9 79999998743 2222222333 4555555543
No 345
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.18 E-value=1.1e-10 Score=112.54 Aligned_cols=82 Identities=27% Similarity=0.461 Sum_probs=72.8
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccCC-CCCCCcceeeeec--CCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRLR-HPNLVPLRAYFQA--KEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~--~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||+|. ..+++.||||+++.. ..+.+.+|+.++.+++ |+||+++++++.. ....++||||+++
T Consensus 41 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 117 (330)
T 3nsz_A 41 VRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNN 117 (330)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCC
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCc
Confidence 4689999999999998 567999999999753 3577999999999997 9999999999987 5678999999999
Q ss_pred CchHHHhhh
Q 012745 416 GSLFSLIHG 424 (457)
Q Consensus 416 GsL~~~l~~ 424 (457)
|+|.++++.
T Consensus 118 ~~l~~~~~~ 126 (330)
T 3nsz_A 118 TDFKQLYQT 126 (330)
T ss_dssp CCHHHHGGG
T ss_pred hhHHHHHHh
Confidence 999999865
No 346
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.18 E-value=3.7e-11 Score=119.68 Aligned_cols=90 Identities=28% Similarity=0.468 Sum_probs=68.0
Q ss_pred HHHHHHHHhcccccCCccEEEEEEec---CCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeec--CCce
Q 012745 332 LEDLLKASAETLGRGTIGSTYKAVLE---SGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQA--KEER 406 (457)
Q Consensus 332 ~~~~~~~~~~~lg~G~~g~Vy~~~~~---~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~ 406 (457)
+++.+...+++||+|+||.||+|... +++.||||++.... ....+.+|+.++++++|||||+++++|.. ....
T Consensus 18 ~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 95 (405)
T 3rgf_A 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKV 95 (405)
T ss_dssp HHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEE
T ss_pred hhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeE
Confidence 33433333568999999999999953 57899999997643 34578899999999999999999999954 6678
Q ss_pred EEEEEecCCCchHHHhhh
Q 012745 407 LLVYDYFPNGSLFSLIHG 424 (457)
Q Consensus 407 ~lv~ey~~~GsL~~~l~~ 424 (457)
++||||++ |+|.+++..
T Consensus 96 ~lv~e~~~-~~l~~~~~~ 112 (405)
T 3rgf_A 96 WLLFDYAE-HDLWHIIKF 112 (405)
T ss_dssp EEEEECCS-EEHHHHHHH
T ss_pred EEEEeCCC-CCHHHHHHH
Confidence 99999998 689988864
No 347
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.18 E-value=1.7e-11 Score=120.93 Aligned_cols=110 Identities=11% Similarity=0.163 Sum_probs=78.4
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccC---cccHHHHHHHH---HHHccCCCCCCCcce-------eeeecCC-
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDAR---YPRLEEFRRHM---DILGRLRHPNLVPLR-------AYFQAKE- 404 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~---~~~~~~~~~E~---~~l~~l~H~niv~l~-------~~~~~~~- 404 (457)
.+.||+|+||.||+|. ..+|+.||||++.... ....+.|.+|+ ..+++++|||||+++ +++...+
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 4689999999999999 4679999999997532 23457799999 556666899999998 5544432
Q ss_pred ----------------ceEEEEEecCCCchHHHhhhCCCCCC--chhhHHHH--HHHHHHHHHHhc
Q 012745 405 ----------------ERLLVYDYFPNGSLFSLIHGTCCLAT--RPLFIFLF--SFFRLIKKVFQM 450 (457)
Q Consensus 405 ----------------~~~lv~ey~~~GsL~~~l~~~~~~~~--~~l~~~~r--~~~~i~~~v~~~ 450 (457)
..|+||||+ +|+|.++++....... ..++|..+ .+.|++.+++++
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 222 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASL 222 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 278999999 5899999986432222 33444433 445666666654
No 348
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.17 E-value=5e-11 Score=112.69 Aligned_cols=85 Identities=28% Similarity=0.402 Sum_probs=64.0
Q ss_pred hcccccCCccEEEEEEe--cCCc--EEEEEEccccCc---ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEe
Q 012745 340 AETLGRGTIGSTYKAVL--ESGF--IVTVKRLKDARY---PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDY 412 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~--~~g~--~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey 412 (457)
.+.||+|+||.||+|.. .+++ .||||+++.... ...+.|.+|+.++.+++||||+++++++.... .++||||
T Consensus 23 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~ 101 (291)
T 1u46_A 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTEL 101 (291)
T ss_dssp EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEEC
T ss_pred eeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEec
Confidence 46899999999999984 2333 689999976432 34567999999999999999999999987654 8899999
Q ss_pred cCCCchHHHhhhC
Q 012745 413 FPNGSLFSLIHGT 425 (457)
Q Consensus 413 ~~~GsL~~~l~~~ 425 (457)
+++|+|.+++...
T Consensus 102 ~~~~~L~~~l~~~ 114 (291)
T 1u46_A 102 APLGSLLDRLRKH 114 (291)
T ss_dssp CTTCBHHHHHHHH
T ss_pred ccCCCHHHHHHhc
Confidence 9999999999864
No 349
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.17 E-value=7.1e-11 Score=112.05 Aligned_cols=107 Identities=15% Similarity=0.158 Sum_probs=82.7
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccC-CCCCCCcceeeeecCCceEEEEEecCCCc
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKEERLLVYDYFPNGS 417 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~~Gs 417 (457)
.+.||+|+||.||+|. ..+++.||||++.... ..+.+.+|+.++..+ +|+|++++++++......++||||+ +|+
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 91 (298)
T 1csn_A 15 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPS 91 (298)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCC
Confidence 4679999999999999 5779999999986543 234588999999999 7999999999999999999999999 899
Q ss_pred hHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 418 LFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 418 L~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
|.++++..... .......+.+.|++.++++++
T Consensus 92 L~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~lH 123 (298)
T 1csn_A 92 LEDLLDLCGRK--FSVKTVAMAAKQMLARVQSIH 123 (298)
T ss_dssp HHHHHHHTTTC--CCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccC--CCHHHHHHHHHHHHHHHHHHH
Confidence 99999865311 112222334456666665543
No 350
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.17 E-value=3.9e-11 Score=127.58 Aligned_cols=107 Identities=15% Similarity=0.201 Sum_probs=78.5
Q ss_pred hcccccCCccEEEEEEec--CCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecCCc-----eEEEEE
Q 012745 340 AETLGRGTIGSTYKAVLE--SGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEE-----RLLVYD 411 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~--~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-----~~lv~e 411 (457)
.+.||+|+||.||+|... +|+.||||++..... .....|.+|+.++.+++|||||+++++|...+. .|+|||
T Consensus 85 ~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E 164 (681)
T 2pzi_A 85 KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVME 164 (681)
T ss_dssp EEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEE
Confidence 367999999999999953 689999999975432 335678999999999999999999999987655 699999
Q ss_pred ecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 412 YFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 412 y~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
|+++|+|.+++...- . .....+.+.+++.++.++|
T Consensus 165 ~~~g~~L~~~~~~~l--~---~~~~~~~~~qi~~aL~~lH 199 (681)
T 2pzi_A 165 YVGGQSLKRSKGQKL--P---VAEAIAYLLEILPALSYLH 199 (681)
T ss_dssp CCCCEECC----CCC--C---HHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCcHHHHHhCCC--C---HHHHHHHHHHHHHHHHHHH
Confidence 999999999876521 1 1222234456666665543
No 351
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.17 E-value=8.9e-11 Score=115.34 Aligned_cols=106 Identities=19% Similarity=0.339 Sum_probs=71.9
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecC------CceEEEE
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAK------EERLLVY 410 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~~lv~ 410 (457)
.+.||+|+||.||+|. ..+|+.||||++..... ...+.+.+|+.+++.++||||+++++++... ...++|+
T Consensus 34 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~ 113 (367)
T 2fst_X 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113 (367)
T ss_dssp EEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEe
Confidence 3689999999999998 56799999999976432 3356788999999999999999999998654 5679999
Q ss_pred EecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 411 DYFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 411 ey~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
||+ +++|.++++... ........ .+.|++.+++++
T Consensus 114 e~~-~~~L~~~~~~~~-l~~~~~~~---i~~qi~~aL~~L 148 (367)
T 2fst_X 114 HLM-GADLNNIVKCQK-LTDDHVQF---LIYQILRGLKYI 148 (367)
T ss_dssp ECC-CEECC-----CC-CCHHHHHH---HHHHHHHHHHHH
T ss_pred ccc-CCCHHHHHhcCC-CCHHHHHH---HHHHHHHHHHHH
Confidence 999 589999987642 22222223 334555555543
No 352
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.16 E-value=1e-10 Score=114.74 Aligned_cols=106 Identities=18% Similarity=0.310 Sum_probs=80.8
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecC-----CceEEEEEe
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAK-----EERLLVYDY 412 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~lv~ey 412 (457)
.+.||+|+||.||+|. ..+++.||||++..... ...+.+.+|++++.+++||||+++++++... ...++||||
T Consensus 32 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~ 111 (364)
T 3qyz_A 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111 (364)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEEC
T ss_pred EEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcc
Confidence 4689999999999998 55789999999976443 3346789999999999999999999998654 367999999
Q ss_pred cCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 413 FPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 413 ~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
++ |+|.++++... .. .....+.+.|++.+++++
T Consensus 112 ~~-~~L~~~l~~~~-~~---~~~~~~i~~qi~~aL~~L 144 (364)
T 3qyz_A 112 ME-TDLYKLLKTQH-LS---NDHICYFLYQILRGLKYI 144 (364)
T ss_dssp CS-EEHHHHHHHCC-CC---HHHHHHHHHHHHHHHHHH
T ss_pred cC-cCHHHHHHhCC-CC---HHHHHHHHHHHHHHHHHH
Confidence 98 69999998753 12 122223344565555553
No 353
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.16 E-value=5.2e-11 Score=115.20 Aligned_cols=106 Identities=25% Similarity=0.321 Sum_probs=76.7
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHH--HccCCCCCCCcceeeeec-----CCceEEEEEe
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDI--LGRLRHPNLVPLRAYFQA-----KEERLLVYDY 412 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~--l~~l~H~niv~l~~~~~~-----~~~~~lv~ey 412 (457)
.+.||+|+||.||+|.. +++.||||++.... ...+..|.++ +..++|+||+++++++.. ....++||||
T Consensus 18 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~ 93 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEY 93 (336)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECC
T ss_pred eeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEec
Confidence 46899999999999976 58999999997532 4455555555 445899999999985532 2356899999
Q ss_pred cCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcCcc
Q 012745 413 FPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMSPK 453 (457)
Q Consensus 413 ~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~~~ 453 (457)
+++|+|.++++.... ......+.+.|++.++++.+.+
T Consensus 94 ~~~g~L~~~l~~~~~----~~~~~~~i~~qi~~~L~~LH~~ 130 (336)
T 3g2f_A 94 YPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYLHTE 130 (336)
T ss_dssp CTTCBHHHHHHHCCB----CHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCcHHHHHhhccc----chhHHHHHHHHHHHHHHHHHhh
Confidence 999999999987642 1222233455677777665543
No 354
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.16 E-value=3.8e-11 Score=125.59 Aligned_cols=87 Identities=24% Similarity=0.396 Sum_probs=74.8
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeec------CCceEEEEE
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQA------KEERLLVYD 411 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~------~~~~~lv~e 411 (457)
.+.||+|+||.||+|.. .+|+.||||+++.... ...+.|.+|++++.+++|||||++++++.. .+..++|||
T Consensus 19 ~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmE 98 (676)
T 3qa8_A 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 98 (676)
T ss_dssp CCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEE
Confidence 46899999999999984 6799999999976532 345679999999999999999999998765 567799999
Q ss_pred ecCCCchHHHhhhCC
Q 012745 412 YFPNGSLFSLIHGTC 426 (457)
Q Consensus 412 y~~~GsL~~~l~~~~ 426 (457)
|+++|+|.+++....
T Consensus 99 y~~ggsL~~~L~~~~ 113 (676)
T 3qa8_A 99 YCEGGDLRKYLNQFE 113 (676)
T ss_dssp CCSSCBHHHHHHSSS
T ss_pred eCCCCCHHHHHHhcc
Confidence 999999999998743
No 355
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.15 E-value=1.5e-10 Score=113.79 Aligned_cols=105 Identities=15% Similarity=0.264 Sum_probs=79.3
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCC------ceEEEE
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKE------ERLLVY 410 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~~~lv~ 410 (457)
.+.||+|+||.||+|. ..+++.||||++..... ...+.+.+|+.+++.++||||+++++++...+ ..++||
T Consensus 30 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~ 109 (371)
T 2xrw_A 30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 109 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEE
T ss_pred eeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEE
Confidence 4679999999999998 56799999999975432 33467889999999999999999999997654 679999
Q ss_pred EecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 411 DYFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 411 ey~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
||++ |+|.+++...- ......... .|++.+++++
T Consensus 110 e~~~-~~l~~~~~~~~--~~~~~~~i~---~qi~~al~~l 143 (371)
T 2xrw_A 110 ELMD-ANLCQVIQMEL--DHERMSYLL---YQMLCGIKHL 143 (371)
T ss_dssp ECCS-EEHHHHHHSCC--CHHHHHHHH---HHHHHHHHHH
T ss_pred EcCC-CCHHHHHhhcc--CHHHHHHHH---HHHHHHHHHH
Confidence 9998 68999887432 222233333 4555555543
No 356
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.15 E-value=3e-11 Score=115.70 Aligned_cols=87 Identities=23% Similarity=0.425 Sum_probs=68.3
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcc------cHHHHHHHHHHHccC----CCCCCCcceeeeecCCceEE
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYP------RLEEFRRHMDILGRL----RHPNLVPLRAYFQAKEERLL 408 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~------~~~~~~~E~~~l~~l----~H~niv~l~~~~~~~~~~~l 408 (457)
.+.||+|+||.||+|. ..+++.||||++...... ....+.+|+.++.++ +|+||+++++++...+..++
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~ 115 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFML 115 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEE
T ss_pred eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEE
Confidence 4789999999999998 467899999999765321 123456788888888 89999999999999899999
Q ss_pred EEEe-cCCCchHHHhhhCC
Q 012745 409 VYDY-FPNGSLFSLIHGTC 426 (457)
Q Consensus 409 v~ey-~~~GsL~~~l~~~~ 426 (457)
|||| +++|+|.+++....
T Consensus 116 v~e~~~~~~~L~~~l~~~~ 134 (312)
T 2iwi_A 116 VLERPLPAQDLFDYITEKG 134 (312)
T ss_dssp EEECCSSEEEHHHHHHHHC
T ss_pred EEEecCCCCCHHHHHHhcC
Confidence 9999 89999999998754
No 357
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.15 E-value=1.4e-10 Score=112.93 Aligned_cols=106 Identities=18% Similarity=0.290 Sum_probs=80.7
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc-ccHHHHHHHHHHHccCCCCCCCcceeeeecC-----CceEEEEEe
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY-PRLEEFRRHMDILGRLRHPNLVPLRAYFQAK-----EERLLVYDY 412 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~lv~ey 412 (457)
.+.||+|+||.||+|. ..+|+.||||.+..... .....+.+|+.++.+++||||+++++++... ...++||||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~ 95 (353)
T 2b9h_A 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQEL 95 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECC
T ss_pred eeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEec
Confidence 4679999999999999 45799999999975433 3356788999999999999999999988654 678999999
Q ss_pred cCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 413 FPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 413 ~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
++ |+|.+++.... ... ....+.+.|++.+++++
T Consensus 96 ~~-~~L~~~~~~~~-~~~---~~~~~~~~qi~~~L~~L 128 (353)
T 2b9h_A 96 MQ-TDLHRVISTQM-LSD---DHIQYFIYQTLRAVKVL 128 (353)
T ss_dssp CS-EEHHHHHHHCC-CCH---HHHHHHHHHHHHHHHHH
T ss_pred cC-ccHHHHHhhcC-CCH---HHHHHHHHHHHHHHHHH
Confidence 98 79999998743 222 22223344565555553
No 358
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.15 E-value=8.4e-13 Score=129.90 Aligned_cols=152 Identities=14% Similarity=0.148 Sum_probs=81.4
Q ss_pred CcEeEEEeCCCCCccccChhhhcC-----CCCCCEEEeecCcccccCC-CC-cCCCCCcEEEccCCccccCCCccC----
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQ-----LDQLRVLSFKGNSISGQIP-NL-LGLVNLKSLYLNDNNFSGKFPGSL---- 117 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~-----l~~L~~L~L~~N~l~~~~~-~~-~~l~~L~~L~Ls~N~l~~~~p~~~---- 117 (457)
+++++|+|++|.|+ ......+.. ..+|+.|+|++|.|+.... .+ ..+++|+.|+|++|+|+......+
T Consensus 72 ~~L~~L~Ls~n~l~-~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 72 SSLRQLNLAGVRMT-PVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp TTCCEEECTTSCCC-HHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCC-HHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 45677777777766 222222222 2567777777777654322 22 235567777777777764322222
Q ss_pred -CCCCCCCEEEeeccccCCC----CcccccCCCccceeecccccccCCC----CCC--CCCCCcEEEeecCcceecCC--
Q 012745 118 -SSLHRLKIIVLANNQISGP----IPESLSNLKRLYMLYLQDNKFTGPI----PPF--NQTNLRFFNVSNNDLSGQIP-- 184 (457)
Q Consensus 118 -~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~----~~~--~~~~L~~L~l~~N~l~~~~p-- 184 (457)
...++|+.|+|++|.|+.. ++..+..+++|++|+|++|.|+... ... ..++|+.|+|++|.|+....
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 2346677777777776531 2333455667777777777765321 110 34567777777777654211
Q ss_pred ---CchhhhccCccccccCc
Q 012745 185 ---VTPALVRFNASSFLLNI 201 (457)
Q Consensus 185 ---~~~~l~~l~~~~~~~n~ 201 (457)
.....+.+..+.+.+|.
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~ 250 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNE 250 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSS
T ss_pred HHHHHHhCCCCCEEeccCCC
Confidence 00112445556666664
No 359
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.14 E-value=4.7e-11 Score=114.55 Aligned_cols=85 Identities=19% Similarity=0.353 Sum_probs=73.0
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCCc
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGS 417 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~Gs 417 (457)
.+.||+|+||.||+|.... .||+|.++.... ...+.|.+|+.++.+++|+||+++++++...+..++||||+++|+
T Consensus 38 ~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~ 115 (319)
T 2y4i_B 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRT 115 (319)
T ss_dssp CCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEE
T ss_pred eeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCc
Confidence 4689999999999998653 489999975432 234568899999999999999999999999999999999999999
Q ss_pred hHHHhhhCC
Q 012745 418 LFSLIHGTC 426 (457)
Q Consensus 418 L~~~l~~~~ 426 (457)
|.++++...
T Consensus 116 L~~~l~~~~ 124 (319)
T 2y4i_B 116 LYSVVRDAK 124 (319)
T ss_dssp HHHHTTSSC
T ss_pred HHHHHHhcC
Confidence 999998754
No 360
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.13 E-value=1.8e-10 Score=112.36 Aligned_cols=84 Identities=23% Similarity=0.308 Sum_probs=70.9
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCCc------eEEEE
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEE------RLLVY 410 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------~~lv~ 410 (457)
.+.||+|+||.||+|. ..+|+.||||++..... ...+.+.+|+.++.+++||||+++++++...+. .++||
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 108 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 108 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEe
Confidence 4679999999999999 46799999999976432 234678899999999999999999999987654 49999
Q ss_pred EecCCCchHHHhhh
Q 012745 411 DYFPNGSLFSLIHG 424 (457)
Q Consensus 411 ey~~~GsL~~~l~~ 424 (457)
||++ |+|.+++..
T Consensus 109 e~~~-~~l~~~~~~ 121 (353)
T 3coi_A 109 PFMQ-TDLQKIMGL 121 (353)
T ss_dssp ECCS-EEGGGTTTS
T ss_pred cccc-CCHHHHhcC
Confidence 9998 799988864
No 361
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.13 E-value=1.9e-10 Score=110.11 Aligned_cols=107 Identities=15% Similarity=0.229 Sum_probs=82.5
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCC--CCCCCcceeeeecCCceEEEEEecCC
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLR--HPNLVPLRAYFQAKEERLLVYDYFPN 415 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~lv~ey~~~ 415 (457)
.+.||+|+||.||++...+++.||||.+..... ...+.+.+|+.++.+++ |+||+++++++...+..++||| +.+
T Consensus 33 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 111 (313)
T 3cek_A 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 111 (313)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCC
Confidence 368999999999999987899999999975432 34567899999999997 5999999999999999999999 567
Q ss_pred CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 416 GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 416 GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|+|.+++.......... ....+.+++.+++.+
T Consensus 112 ~~L~~~l~~~~~~~~~~---~~~i~~qi~~aL~~L 143 (313)
T 3cek_A 112 IDLNSWLKKKKSIDPWE---RKSYWKNMLEAVHTI 143 (313)
T ss_dssp EEHHHHHHHCSSCCHHH---HHHHHHHHHHHHHHH
T ss_pred CcHHHHHHhcCCCCHHH---HHHHHHHHHHHHHHH
Confidence 89999998754222111 222334555555543
No 362
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.13 E-value=2.1e-10 Score=112.73 Aligned_cols=85 Identities=22% Similarity=0.312 Sum_probs=72.1
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeeeecCCce------EEEE
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEER------LLVY 410 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~------~lv~ 410 (457)
.+.||+|+||.||+|. ..+|+.||||++..... ...+.+.+|+.++..++||||++++++|...+.. ++||
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 126 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 126 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEE
T ss_pred EeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEE
Confidence 4679999999999998 56799999999976532 2356788999999999999999999999876654 9999
Q ss_pred EecCCCchHHHhhhC
Q 012745 411 DYFPNGSLFSLIHGT 425 (457)
Q Consensus 411 ey~~~GsL~~~l~~~ 425 (457)
||++ |+|.+++...
T Consensus 127 e~~~-~~l~~~~~~~ 140 (371)
T 4exu_A 127 PFMQ-TDLQKIMGME 140 (371)
T ss_dssp ECCC-EEHHHHTTSC
T ss_pred cccc-ccHHHHhhcC
Confidence 9999 7999888643
No 363
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.12 E-value=2.8e-10 Score=108.69 Aligned_cols=109 Identities=21% Similarity=0.252 Sum_probs=78.2
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc-----ccHHHHHHHHHHHccCC---CCCCCcceeeeecCC-----c
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY-----PRLEEFRRHMDILGRLR---HPNLVPLRAYFQAKE-----E 405 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~-----~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~-----~ 405 (457)
.+.||+|+||.||+|. ..+++.||||+++.... .....+.+|+.++.+++ ||||++++++|.... .
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~ 93 (308)
T 3g33_A 14 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 93 (308)
T ss_dssp EEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEE
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCcee
Confidence 3679999999999999 56799999999974321 22356778888777664 999999999998755 4
Q ss_pred eEEEEEecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 406 RLLVYDYFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 406 ~~lv~ey~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
.++||||++ |+|.+++....... .......+.+.|++.+++++
T Consensus 94 ~~lv~e~~~-~~L~~~~~~~~~~~-~~~~~~~~i~~qi~~al~~l 136 (308)
T 3g33_A 94 VTLVFEHVD-QDLRTYLDKAPPPG-LPAETIKDLMRQFLRGLDFL 136 (308)
T ss_dssp EEEEEECCC-CBHHHHHHTCCTTC-SCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEehhhh-cCHHHHHhhccCCC-CCHHHHHHHHHHHHHHHHHH
Confidence 789999998 69999998754211 11122223344566655553
No 364
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.11 E-value=6.5e-11 Score=117.08 Aligned_cols=110 Identities=16% Similarity=0.200 Sum_probs=80.8
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccCC--------CCCCCcceeeee----cCCce
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRLR--------HPNLVPLRAYFQ----AKEER 406 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~--------H~niv~l~~~~~----~~~~~ 406 (457)
.+.||+|+||.||+|. ..+++.||||+++... ...+.+.+|+.++.+++ |+||+++++++. .....
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~ 120 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHI 120 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEE
T ss_pred EEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceE
Confidence 4679999999999998 5678999999997542 34567889999999885 788999999987 45578
Q ss_pred EEEEEecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcCc
Q 012745 407 LLVYDYFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMSP 452 (457)
Q Consensus 407 ~lv~ey~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~~ 452 (457)
++||||+. |+|.+++..... .........+.+.|++.+++++|.
T Consensus 121 ~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~ 164 (397)
T 1wak_A 121 CMVFEVLG-HHLLKWIIKSNY-QGLPLPCVKKIIQQVLQGLDYLHT 164 (397)
T ss_dssp EEEECCCC-CBHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccC-ccHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999995 677777765421 111223333445677777766654
No 365
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.11 E-value=1.3e-10 Score=113.90 Aligned_cols=109 Identities=16% Similarity=0.101 Sum_probs=76.5
Q ss_pred hcccccCCccEEEEEEecC------CcEEEEEEccccCccc-----------HHHHHHHHHHHccCCCCCCCcceeeeec
Q 012745 340 AETLGRGTIGSTYKAVLES------GFIVTVKRLKDARYPR-----------LEEFRRHMDILGRLRHPNLVPLRAYFQA 402 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~------g~~vavK~l~~~~~~~-----------~~~~~~E~~~l~~l~H~niv~l~~~~~~ 402 (457)
.+.||+|+||.||+|.... ++.||||++....... ...+..|+..+..++|+|||++++++..
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 119 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLH 119 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEE
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeee
Confidence 4689999999999998543 4789999987654211 1234556777888999999999999876
Q ss_pred C----CceEEEEEecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 403 K----EERLLVYDYFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 403 ~----~~~~lv~ey~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
. ...++||||+ +|+|.++++..... .......+.+.|++.+++++|
T Consensus 120 ~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~--l~~~~~~~i~~qi~~~l~~lH 169 (364)
T 3op5_A 120 DKNGKSYRFMIMDRF-GSDLQKIYEANAKR--FSRKTVLQLSLRILDILEYIH 169 (364)
T ss_dssp EETTEEEEEEEEECE-EEEHHHHHHHTTSC--CCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCcceEEEEEeCC-CCCHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHH
Confidence 4 3479999999 89999999875311 112222334556666666543
No 366
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.11 E-value=2.1e-10 Score=113.30 Aligned_cols=107 Identities=22% Similarity=0.390 Sum_probs=75.2
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecC---------------
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAK--------------- 403 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--------------- 403 (457)
.+.||+|+||.||+|. ..+|+.||||++..... ...+|+.+++.++|||||+++++|...
T Consensus 12 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~ 87 (383)
T 3eb0_A 12 GKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHN 87 (383)
T ss_dssp EEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC---------------
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccccccccccccc
Confidence 4689999999999998 57799999999865432 234799999999999999999998543
Q ss_pred -----------------------CceEEEEEecCCCchHHHhhhCCC-CCCchhhHHHHHHHHHHHHHHhcC
Q 012745 404 -----------------------EERLLVYDYFPNGSLFSLIHGTCC-LATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 404 -----------------------~~~~lv~ey~~~GsL~~~l~~~~~-~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
...++||||++ |+|.+.++.... ............+.|++.++++++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 88 KLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ----------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 23789999999 688888764110 011112222334456666666543
No 367
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.10 E-value=4e-10 Score=108.53 Aligned_cols=84 Identities=20% Similarity=0.305 Sum_probs=69.4
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCc-ccHHHHHHHHH-HHccCCCCCCCcceeeeecCCceEEEEEecCCC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARY-PRLEEFRRHMD-ILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNG 416 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~-~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~G 416 (457)
.+.||+|+||.||+|.. .+|+.||||+++.... ....++..|+. +++.++||||+++++++...+..++||||++ |
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~-~ 105 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMS-T 105 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCS-E
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecC-C
Confidence 46799999999999994 5799999999976532 23445666666 7788899999999999999999999999999 5
Q ss_pred chHHHhhh
Q 012745 417 SLFSLIHG 424 (457)
Q Consensus 417 sL~~~l~~ 424 (457)
+|.+++..
T Consensus 106 ~l~~~~~~ 113 (327)
T 3aln_A 106 SFDKFYKY 113 (327)
T ss_dssp EHHHHHHH
T ss_pred ChHHHHHH
Confidence 88888763
No 368
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.10 E-value=2.2e-10 Score=115.00 Aligned_cols=108 Identities=15% Similarity=0.225 Sum_probs=81.4
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccC------CCCCCCcceeeeecCCceEEEEEe
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRL------RHPNLVPLRAYFQAKEERLLVYDY 412 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l------~H~niv~l~~~~~~~~~~~lv~ey 412 (457)
.+.||+|+||.||+|. ..+++.||||+++... ...+.+.+|+.++..+ .|+||++++++|...+..++||||
T Consensus 102 ~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 180 (429)
T 3kvw_A 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFEL 180 (429)
T ss_dssp EEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECC
T ss_pred EEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEec
Confidence 4689999999999998 5668999999997643 3345677888887766 677999999999999999999999
Q ss_pred cCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 413 FPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 413 ~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+. |+|.+++...... ........+.+.|++.+++++
T Consensus 181 ~~-~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~aL~~L 216 (429)
T 3kvw_A 181 LS-MNLYELIKKNKFQ-GFSLPLVRKFAHSILQCLDAL 216 (429)
T ss_dssp CC-CBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHH
T ss_pred cC-CCHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHH
Confidence 97 6999999875421 112223333445666666554
No 369
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.10 E-value=1.4e-10 Score=112.87 Aligned_cols=107 Identities=13% Similarity=0.064 Sum_probs=73.8
Q ss_pred hcccccCCccEEEEEEec----CCcEEEEEEccccCcc-----------cHHHHHHHHHHHccCCCCCCCcceeeeec--
Q 012745 340 AETLGRGTIGSTYKAVLE----SGFIVTVKRLKDARYP-----------RLEEFRRHMDILGRLRHPNLVPLRAYFQA-- 402 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~----~g~~vavK~l~~~~~~-----------~~~~~~~E~~~l~~l~H~niv~l~~~~~~-- 402 (457)
.+.||+|+||.||+|... ++..||||.+...... ....+.+|+..+..++|+||+++++++..
T Consensus 42 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~ 121 (345)
T 2v62_A 42 GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEF 121 (345)
T ss_dssp EEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEES
T ss_pred EeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccccccc
Confidence 468999999999999953 5788999998765321 12346788899999999999999999987
Q ss_pred --CCceEEEEEecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 403 --KEERLLVYDYFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 403 --~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
....++||||+ +|+|.+++........ ....+.+.|++.+++++
T Consensus 122 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~---~~~~~i~~qi~~aL~~L 167 (345)
T 2v62_A 122 KGRSYRFMVMERL-GIDLQKISGQNGTFKK---STVLQLGIRMLDVLEYI 167 (345)
T ss_dssp SSCEEEEEEEECE-EEEHHHHCBGGGBCCH---HHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEEecc-CCCHHHHHHhcCCCCH---HHHHHHHHHHHHHHHHH
Confidence 67789999999 8999999987542221 22223445566665553
No 370
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.10 E-value=7.1e-11 Score=118.20 Aligned_cols=107 Identities=25% Similarity=0.510 Sum_probs=75.7
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecC----C--ceEEEEEe
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAK----E--ERLLVYDY 412 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~----~--~~~lv~ey 412 (457)
.+.||+|+||.||+|.. .+|+.||||++.... +.+.+|++++++++|+|||+++++|... + ..++||||
T Consensus 59 ~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~ 134 (420)
T 1j1b_A 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY 134 (420)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhc
Confidence 36899999999999995 569999999986543 2234799999999999999999988542 1 35799999
Q ss_pred cCCCchHHHhhhCC-CCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 413 FPNGSLFSLIHGTC-CLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 413 ~~~GsL~~~l~~~~-~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
+++ +|.+.++... ........+..+.+.|++.+++++|
T Consensus 135 ~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH 173 (420)
T 1j1b_A 135 VPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173 (420)
T ss_dssp CCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 995 7777665311 0111223334445567777776644
No 371
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.09 E-value=1.1e-12 Score=129.12 Aligned_cols=134 Identities=15% Similarity=0.185 Sum_probs=103.6
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CC-----cCCCCCcEEEccCCccccC----CCccCC
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NL-----LGLVNLKSLYLNDNNFSGK----FPGSLS 118 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~-----~~l~~L~~L~Ls~N~l~~~----~p~~~~ 118 (457)
.+|++|+|++|.|+..-.......+++|+.|+|++|.|+.... .+ ...++|++|+|++|.|+.. ++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 6899999999999743223234456789999999999986544 33 3568999999999999742 444557
Q ss_pred CCCCCCEEEeeccccCCC----CcccccCCCccceeecccccccCCCCCC------CCCCCcEEEeecCcceec
Q 012745 119 SLHRLKIIVLANNQISGP----IPESLSNLKRLYMLYLQDNKFTGPIPPF------NQTNLRFFNVSNNDLSGQ 182 (457)
Q Consensus 119 ~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~~~~------~~~~L~~L~l~~N~l~~~ 182 (457)
.+++|++|+|++|.|++. ++..+..+++|+.|+|++|.|+...... ..++|+.|+|++|.|+..
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 789999999999999743 2456778889999999999997532111 458899999999999854
No 372
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.09 E-value=1.7e-10 Score=112.75 Aligned_cols=110 Identities=24% Similarity=0.362 Sum_probs=67.6
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCc-------eEEEEE
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEE-------RLLVYD 411 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-------~~lv~e 411 (457)
.+.||+|+||.||+|.. .+|+.||||++.... .....+.+|+..+..++||||++++++|...+. .++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e 106 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVME 106 (360)
T ss_dssp C----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEee
Confidence 46899999999999994 679999999986543 233457788888899999999999999965433 789999
Q ss_pred ecCCCchHHHhhhC-CCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 412 YFPNGSLFSLIHGT-CCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 412 y~~~GsL~~~l~~~-~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
|+++ +|.+.+... ..............+.+++.+++.++
T Consensus 107 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH 146 (360)
T 3e3p_A 107 YVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH 146 (360)
T ss_dssp CCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred cccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence 9996 555544421 10111122223334457777776655
No 373
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.09 E-value=2.1e-10 Score=109.89 Aligned_cols=109 Identities=15% Similarity=0.212 Sum_probs=70.5
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCcc-cH-HHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEEecCCC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARYP-RL-EEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYDYFPNG 416 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~-~~-~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ey~~~G 416 (457)
.+.||+|+||.||+|.. .+|+.||||++...... .. +.+..+..++..++||||+++++++...+..++||||+ ++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 108 (318)
T 2dyl_A 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GT 108 (318)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SE
T ss_pred cceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CC
Confidence 46899999999999995 57999999999765432 22 33445556788889999999999999999999999999 45
Q ss_pred chHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 417 SLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 417 sL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
.+..+...... ........+.+.+++.++++++
T Consensus 109 ~~~~l~~~~~~--~~~~~~~~~~~~~i~~~l~~lH 141 (318)
T 2dyl_A 109 CAEKLKKRMQG--PIPERILGKMTVAIVKALYYLK 141 (318)
T ss_dssp EHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH
Confidence 55555543221 1112222334456666666554
No 374
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.09 E-value=2.6e-10 Score=114.66 Aligned_cols=83 Identities=18% Similarity=0.151 Sum_probs=71.2
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccC-CCCCCCcceeeeecCCceEEEEEecCCCch
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
.++||+|+||+||.+...+|+.||||++... ..+.+.+|+.++.++ +|||||++++++...+..++||||++ |+|
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 4679999999998766667999999998653 245678999999876 89999999999999999999999996 799
Q ss_pred HHHhhhCC
Q 012745 419 FSLIHGTC 426 (457)
Q Consensus 419 ~~~l~~~~ 426 (457)
.+++....
T Consensus 96 ~~~l~~~~ 103 (434)
T 2rio_A 96 QDLVESKN 103 (434)
T ss_dssp HHHHHTC-
T ss_pred HHHHhccC
Confidence 99998754
No 375
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.07 E-value=1.2e-10 Score=114.31 Aligned_cols=110 Identities=18% Similarity=0.241 Sum_probs=83.5
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccCC-----------CCCCCcceeeeecCC---
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRLR-----------HPNLVPLRAYFQAKE--- 404 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~~~~~~~~--- 404 (457)
.+.||+|+||.||+|. ..+++.||||++.... ...+.+.+|+.++.+++ |+||+++++++...+
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 102 (373)
T 1q8y_A 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNG 102 (373)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTE
T ss_pred EEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCC
Confidence 4689999999999999 4679999999997532 34567889999998876 899999999987643
Q ss_pred -ceEEEEEecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcCc
Q 012745 405 -ERLLVYDYFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMSP 452 (457)
Q Consensus 405 -~~~lv~ey~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~~ 452 (457)
..++||||+ +|+|.+++...... ........+.+.|++.++++++.
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~~~~-~~~~~~~~~i~~qi~~aL~~lH~ 149 (373)
T 1q8y_A 103 VHVVMVFEVL-GENLLALIKKYEHR-GIPLIYVKQISKQLLLGLDYMHR 149 (373)
T ss_dssp EEEEEEECCC-CEEHHHHHHHTTTS-CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEecC-CCCHHHHHHHhhcc-CCcHHHHHHHHHHHHHHHHHHHh
Confidence 678999999 79999999874321 12233334455677777766654
No 376
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.07 E-value=3.1e-10 Score=113.93 Aligned_cols=83 Identities=17% Similarity=0.237 Sum_probs=70.0
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccC-CCCCCCcceeeeecCCceEEEEEecCCCch
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
.++||+|+||.||.....+|+.||||++..... ..+.+|+.++.++ +|||||++++++...+..|+||||++ |+|
T Consensus 29 ~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L 104 (432)
T 3p23_A 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATL 104 (432)
T ss_dssp EEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEH
T ss_pred CCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCH
Confidence 468999999997655556799999999976432 2356899999999 79999999999999999999999997 699
Q ss_pred HHHhhhCC
Q 012745 419 FSLIHGTC 426 (457)
Q Consensus 419 ~~~l~~~~ 426 (457)
.+++....
T Consensus 105 ~~~l~~~~ 112 (432)
T 3p23_A 105 QEYVEQKD 112 (432)
T ss_dssp HHHHHSSS
T ss_pred HHHHHhcC
Confidence 99998754
No 377
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.07 E-value=4.1e-10 Score=109.13 Aligned_cols=82 Identities=22% Similarity=0.335 Sum_probs=64.7
Q ss_pred hcccccCCccEEEEEEe-cCCcEEEEEEccccCcccHHHHHHHH-HHHccCCCCCCCcceeeeec----CCceEEEEEec
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFIVTVKRLKDARYPRLEEFRRHM-DILGRLRHPNLVPLRAYFQA----KEERLLVYDYF 413 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~-~~l~~l~H~niv~l~~~~~~----~~~~~lv~ey~ 413 (457)
.++||+|+||.||+|.. .+|+.||||++.... ...+|+ ..+..++|+||+++++++.. ....++||||+
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 108 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECM 108 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEecc
Confidence 45799999999999994 579999999996532 222333 34566799999999999876 34579999999
Q ss_pred CCCchHHHhhhCC
Q 012745 414 PNGSLFSLIHGTC 426 (457)
Q Consensus 414 ~~GsL~~~l~~~~ 426 (457)
++|+|.+++....
T Consensus 109 ~gg~L~~~l~~~~ 121 (336)
T 3fhr_A 109 EGGELFSRIQERG 121 (336)
T ss_dssp TTEEHHHHHHTC-
T ss_pred CCCCHHHHHHhcC
Confidence 9999999998753
No 378
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.06 E-value=3.1e-10 Score=109.15 Aligned_cols=109 Identities=21% Similarity=0.264 Sum_probs=77.3
Q ss_pred hcccccCCccEEEEEEe--cCCcEEEEEEccccCc--ccHHHHHHHHHHHccC---CCCCCCcceeeee-----cCCceE
Q 012745 340 AETLGRGTIGSTYKAVL--ESGFIVTVKRLKDARY--PRLEEFRRHMDILGRL---RHPNLVPLRAYFQ-----AKEERL 407 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~--~~g~~vavK~l~~~~~--~~~~~~~~E~~~l~~l---~H~niv~l~~~~~-----~~~~~~ 407 (457)
.+.||+|+||.||+|.. .+|+.||||+++.... .....+.+|+.++..+ +||||++++++|. .....+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~ 95 (326)
T 1blx_A 16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEE
T ss_pred eeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEE
Confidence 46899999999999995 4688999999975432 2234567777777665 8999999999987 445689
Q ss_pred EEEEecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 408 LVYDYFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 408 lv~ey~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+||||++ |+|.+++....... .......+.+.+++.+++++
T Consensus 96 lv~e~~~-~~L~~~l~~~~~~~-~~~~~~~~~~~qi~~~l~~l 136 (326)
T 1blx_A 96 LVFEHVD-QDLTTYLDKVPEPG-VPTETIKDMMFQLLRGLDFL 136 (326)
T ss_dssp EEEECCS-CBHHHHHHHSCTTC-SCHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCC-CCHHHHHHhcccCC-CCHHHHHHHHHHHHHHHHHH
Confidence 9999999 79999998753211 11222223344566555553
No 379
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.06 E-value=1.4e-10 Score=113.15 Aligned_cols=104 Identities=16% Similarity=0.068 Sum_probs=75.0
Q ss_pred hcccccCCccEEEEEEec---------CCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCc---------------
Q 012745 340 AETLGRGTIGSTYKAVLE---------SGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVP--------------- 395 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~---------~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~--------------- 395 (457)
.+.||+|+||.||+|... +++.||||.+... +.+.+|++++.+++|||||+
T Consensus 47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~ 121 (352)
T 2jii_A 47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPT 121 (352)
T ss_dssp EEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCC
T ss_pred EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCccCccc
Confidence 467999999999999854 3789999998754 35889999999999999887
Q ss_pred ceeeeec-CCceEEEEEecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 396 LRAYFQA-KEERLLVYDYFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 396 l~~~~~~-~~~~~lv~ey~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
+++++.. .+..++||||+ +|+|.+++..... .........+.+.|++.+++++
T Consensus 122 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~L 175 (352)
T 2jii_A 122 CMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPK-HVLSERSVLQVACRLLDALEFL 175 (352)
T ss_dssp CCEEEEETTTEEEEEEECC-CEEHHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHH
T ss_pred hhhccccCCcEEEEEecCC-CcCHHHHHHhCCc-CCCCHHHHHHHHHHHHHHHHHH
Confidence 5666665 67789999999 8999999987521 1111222223445666666554
No 380
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.05 E-value=2.7e-10 Score=113.01 Aligned_cols=107 Identities=21% Similarity=0.462 Sum_probs=71.6
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeeeecCCc------eEEEEEec
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYFQAKEE------RLLVYDYF 413 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------~~lv~ey~ 413 (457)
.+.||+|+||.||+|....+..||+|++..... ...+|+.+++.++|||||+++++|...+. .++||||+
T Consensus 45 ~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~ 120 (394)
T 4e7w_A 45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120 (394)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECC
T ss_pred eEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeecc
Confidence 468999999999999976666699988864432 12379999999999999999999865432 78999999
Q ss_pred CCCchHHHhhh-CCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 414 PNGSLFSLIHG-TCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 414 ~~GsL~~~l~~-~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
+++ +.+.+.. ...............+.|++.+++++|
T Consensus 121 ~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH 158 (394)
T 4e7w_A 121 PET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH 158 (394)
T ss_dssp SEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred Ccc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 965 4444332 110011112222334456666666543
No 381
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.03 E-value=5.8e-10 Score=105.61 Aligned_cols=106 Identities=15% Similarity=0.182 Sum_probs=78.2
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeee-ecCCceEEEEEecCCCc
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYF-QAKEERLLVYDYFPNGS 417 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~-~~~~~~~lv~ey~~~Gs 417 (457)
.+.||+|+||.||+|. ..+|+.||||++.... ..+.+.+|+.++..++|++++..++++ ...+..++||||+ +|+
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 3uzp_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCC
Confidence 4679999999999999 4779999999986543 234688999999999999888777766 4566779999999 899
Q ss_pred hHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 418 LFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 418 L~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|.++++..... .......+.+.|++.+++++
T Consensus 91 L~~~~~~~~~~--~~~~~~~~i~~qi~~~l~~l 121 (296)
T 3uzp_A 91 LEDLFNFCSRK--FSLKTVLLLADQMISRIEYI 121 (296)
T ss_dssp HHHHHHHTTTC--CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccC--CCHHHHHHHHHHHHHHHHHH
Confidence 99999854311 11222223345566665553
No 382
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.03 E-value=2.6e-10 Score=109.75 Aligned_cols=107 Identities=18% Similarity=0.349 Sum_probs=81.3
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcc------cHHHHHHHHHHHccCC--CCCCCcceeeeecCCceEEEE
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYP------RLEEFRRHMDILGRLR--HPNLVPLRAYFQAKEERLLVY 410 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~------~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~lv~ 410 (457)
.+.||+|+||.||+|. ..+++.||||.++..... ..+.+.+|+.++.+++ |+||+++++++...+..++||
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~ 127 (320)
T 3a99_A 48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 127 (320)
T ss_dssp EEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEE
Confidence 4689999999999998 567999999999765321 1245778999999996 599999999999999999999
Q ss_pred EecCC-CchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHh
Q 012745 411 DYFPN-GSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQ 449 (457)
Q Consensus 411 ey~~~-GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~ 449 (457)
||+.+ ++|.+++......... ...+.+.|++.+++.
T Consensus 128 e~~~~~~~L~~~l~~~~~l~~~---~~~~i~~qi~~~L~~ 164 (320)
T 3a99_A 128 ERPEPVQDLFDFITERGALQEE---LARSFFWQVLEAVRH 164 (320)
T ss_dssp ECCSSEEEHHHHHHHHCSCCHH---HHHHHHHHHHHHHHH
T ss_pred EcCCCCccHHHHHhccCCCCHH---HHHHHHHHHHHHHHH
Confidence 99986 8999999875422222 222233455555554
No 383
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.03 E-value=4.3e-10 Score=108.45 Aligned_cols=109 Identities=21% Similarity=0.301 Sum_probs=81.2
Q ss_pred hcccccCCccEEEEEEe--cCCcEEEEEEccccCcccHHHHHHHHHHHccCCCC------CCCcceeeeecCCceEEEEE
Q 012745 340 AETLGRGTIGSTYKAVL--ESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHP------NLVPLRAYFQAKEERLLVYD 411 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~--~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~------niv~l~~~~~~~~~~~lv~e 411 (457)
.+.||+|+||.||+|.. .+++.||||+++... ...+.+.+|+.++..++|+ +++++++++...+..++|||
T Consensus 19 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e 97 (339)
T 1z57_A 19 VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFE 97 (339)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEE
T ss_pred EEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEc
Confidence 46799999999999984 468899999997543 3456788999999887665 49999999999999999999
Q ss_pred ecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 412 YFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 412 y~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
|+ +|+|.+++...... ........+.+.|++.++++++
T Consensus 98 ~~-~~~l~~~l~~~~~~-~~~~~~~~~~~~qi~~~l~~lH 135 (339)
T 1z57_A 98 LL-GLSTYDFIKENGFL-PFRLDHIRKMAYQICKSVNFLH 135 (339)
T ss_dssp CC-CCBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CC-CCCHHHHHHhcCCC-CCcHHHHHHHHHHHHHHHHHHH
Confidence 99 79999999875411 1112222334456666665543
No 384
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.01 E-value=7.2e-10 Score=108.88 Aligned_cols=84 Identities=17% Similarity=0.063 Sum_probs=56.8
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc---ccHHHHHHHH---HHHccCCCCCCCcce-------eeeecC--
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY---PRLEEFRRHM---DILGRLRHPNLVPLR-------AYFQAK-- 403 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~~E~---~~l~~l~H~niv~l~-------~~~~~~-- 403 (457)
.+.||+|+||.||+|. ..+|+.||||++..... ...+.+.+|+ ..+.. +||||++++ +++...
T Consensus 67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~ 145 (371)
T 3q60_A 67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQSQ 145 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETTS
T ss_pred eeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCCC
Confidence 4689999999999999 55799999999987643 2345577784 55555 799988755 333322
Q ss_pred ---------------CceEEEEEecCCCchHHHhhhC
Q 012745 404 ---------------EERLLVYDYFPNGSLFSLIHGT 425 (457)
Q Consensus 404 ---------------~~~~lv~ey~~~GsL~~~l~~~ 425 (457)
...++||||++ |+|.++++..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~ 181 (371)
T 3q60_A 146 PPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL 181 (371)
T ss_dssp CSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH
T ss_pred CCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh
Confidence 23799999999 8999999864
No 385
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.01 E-value=7.1e-10 Score=104.91 Aligned_cols=106 Identities=15% Similarity=0.182 Sum_probs=76.8
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCCcceeee-ecCCceEEEEEecCCCc
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLVPLRAYF-QAKEERLLVYDYFPNGS 417 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~-~~~~~~~lv~ey~~~Gs 417 (457)
.+.||+|+||.||+|. ..+++.||||++.... ..+.+.+|++++..++|++++..+++| ...+..++||||+ +|+
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 4hgt_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred eeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCC
Confidence 4689999999999999 4779999999875543 223588999999999998888877766 4566789999999 899
Q ss_pred hHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhc
Q 012745 418 LFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQM 450 (457)
Q Consensus 418 L~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~ 450 (457)
|.+++...... .......+.+.|++.++++.
T Consensus 91 L~~~~~~~~~~--~~~~~~~~i~~qi~~~l~~L 121 (296)
T 4hgt_A 91 LEDLFNFCSRK--FSLKTVLLLADQMISRIEYI 121 (296)
T ss_dssp HHHHHHHTTSC--CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHH
Confidence 99999854311 11222223445666666553
No 386
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.00 E-value=7.7e-10 Score=109.16 Aligned_cols=109 Identities=18% Similarity=0.272 Sum_probs=83.4
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccCC-CC-----CCCcceeeeecCCceEEEEEe
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRLR-HP-----NLVPLRAYFQAKEERLLVYDY 412 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~-----niv~l~~~~~~~~~~~lv~ey 412 (457)
.+.||+|+||.||+|. ..+++.||||+++... ...+++..|+.++..++ |+ +++++.+++...+..++||||
T Consensus 59 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 137 (382)
T 2vx3_A 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEM 137 (382)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEEC
T ss_pred EEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEec
Confidence 4689999999999998 4578999999997542 33566778888888875 55 499999999999999999999
Q ss_pred cCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 413 FPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 413 ~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
++ |+|.+++..... .........+.+.|++.+++..+
T Consensus 138 ~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~al~~lH 174 (382)
T 2vx3_A 138 LS-YNLYDLLRNTNF-RGVSLNLTRKFAQQMCTALLFLA 174 (382)
T ss_dssp CC-CBHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHT
T ss_pred CC-CCHHHHHhhcCc-CCCCHHHHHHHHHHHHHHHHHhc
Confidence 97 699999987531 11223333445667888887765
No 387
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=98.97 E-value=1.3e-09 Score=112.48 Aligned_cols=84 Identities=13% Similarity=0.178 Sum_probs=64.0
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCcc--------cHHHHHHHHHHHccCCCCCCCcceeeeecCCceEEEEE
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARYP--------RLEEFRRHMDILGRLRHPNLVPLRAYFQAKEERLLVYD 411 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~--------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 411 (457)
.+.||+|+||.||+|... +..+++|+....... ..+.|.+|++++.+++||||+++..++...+..++|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 568999999999999644 778888886543211 13458999999999999999988777778888899999
Q ss_pred ecCCCchHHHhhh
Q 012745 412 YFPNGSLFSLIHG 424 (457)
Q Consensus 412 y~~~GsL~~~l~~ 424 (457)
|+++|+|.++++.
T Consensus 420 ~~~ggsL~~~l~~ 432 (540)
T 3en9_A 420 YINGKLAKDVIED 432 (540)
T ss_dssp CCCSEEHHHHSTT
T ss_pred CCCCCCHHHHHHH
Confidence 9999999999987
No 388
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=98.97 E-value=1.4e-09 Score=110.46 Aligned_cols=107 Identities=18% Similarity=0.170 Sum_probs=77.1
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCC-CCcceeeeecCCceEEEEEecCCCc
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPN-LVPLRAYFQAKEERLLVYDYFPNGS 417 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~~~~~~~~~~~lv~ey~~~Gs 417 (457)
.+.||+|+||.||+|. ..+++.||||++..... ..++..|++++..++|.+ ++.+..++...+..++||||+ +|+
T Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~s 88 (483)
T 3sv0_A 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPS 88 (483)
T ss_dssp CCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCC
Confidence 3679999999999999 56799999998765432 235889999999998754 555555666777889999999 899
Q ss_pred hHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 418 LFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 418 L~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
|.++++.... ........+.+.|++.+|++++
T Consensus 89 L~~ll~~~~~--~l~~~~~~~i~~qi~~aL~yLH 120 (483)
T 3sv0_A 89 LEDLFNFCSR--KLSLKTVLMLADQMINRVEFVH 120 (483)
T ss_dssp HHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999985431 1112222334456666666543
No 389
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=98.95 E-value=1.2e-09 Score=106.18 Aligned_cols=109 Identities=16% Similarity=0.299 Sum_probs=79.9
Q ss_pred hcccccCCccEEEEEEe-cCC-cEEEEEEccccCcccHHHHHHHHHHHccCCCCC------CCcceeeeecCCceEEEEE
Q 012745 340 AETLGRGTIGSTYKAVL-ESG-FIVTVKRLKDARYPRLEEFRRHMDILGRLRHPN------LVPLRAYFQAKEERLLVYD 411 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g-~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~~~~lv~e 411 (457)
.+.||+|+||.||+|.. .++ +.||||+++... ...+.+.+|+.++.+++|++ ++.+.+++...+..++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e 102 (355)
T 2eu9_A 24 VGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFE 102 (355)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEE
T ss_pred EEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEe
Confidence 46799999999999984 444 789999997543 34567888999999887766 8899999999999999999
Q ss_pred ecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 412 YFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 412 y~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
|+ +|+|.+++..... .........+.+.|++.++++++
T Consensus 103 ~~-~~~l~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~lH 140 (355)
T 2eu9_A 103 LL-GKNTFEFLKENNF-QPYPLPHVRHMAYQLCHALRFLH 140 (355)
T ss_dssp CC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cc-CCChHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 99 5778888776431 11122233334556666666544
No 390
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.93 E-value=1.3e-09 Score=105.13 Aligned_cols=99 Identities=13% Similarity=0.073 Sum_probs=62.4
Q ss_pred CCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCC-EEEeeccccCCCCcccccCCCcccee
Q 012745 73 LDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLK-IIVLANNQISGPIPESLSNLKRLYML 150 (457)
Q Consensus 73 l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L 150 (457)
+++|+.|+|++|+++.+++ .|.++.+|+.|+|++| ++.+.+..|.++.+|+ .|+|.+ +++.+.+.+|..|++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 5666666666666666555 6666666666666666 5555556666666666 666666 5554555666666666666
Q ss_pred ecccccccCCCCCC--CCCCCcEEE
Q 012745 151 YLQDNKFTGPIPPF--NQTNLRFFN 173 (457)
Q Consensus 151 ~l~~N~l~~~~~~~--~~~~L~~L~ 173 (457)
++++|.++.+.+.. .+++|+.|+
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EeCCCccCccchhhhcCCcchhhhc
Confidence 66666666544433 556666554
No 391
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=98.88 E-value=5e-09 Score=98.88 Aligned_cols=76 Identities=14% Similarity=0.197 Sum_probs=61.9
Q ss_pred cccccCCccEEEEEEecCCcEEEEEEccccCc------------------ccHHHHHHHHHHHccCCCCCCCcceeeeec
Q 012745 341 ETLGRGTIGSTYKAVLESGFIVTVKRLKDARY------------------PRLEEFRRHMDILGRLRHPNLVPLRAYFQA 402 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~------------------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 402 (457)
+.||+|+||.||+|...+|+.||||.++.... .....+.+|+.++.+++ | +++.+++..
T Consensus 96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~~ 172 (282)
T 1zar_A 96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYAW 172 (282)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEEE
T ss_pred CEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEec
Confidence 78999999999999987799999999975321 12456899999999999 5 677775543
Q ss_pred CCceEEEEEecCCCchHH
Q 012745 403 KEERLLVYDYFPNGSLFS 420 (457)
Q Consensus 403 ~~~~~lv~ey~~~GsL~~ 420 (457)
+..++||||+++|+|.+
T Consensus 173 -~~~~lvmE~~~g~~L~~ 189 (282)
T 1zar_A 173 -EGNAVLMELIDAKELYR 189 (282)
T ss_dssp -ETTEEEEECCCCEEGGG
T ss_pred -cceEEEEEecCCCcHHH
Confidence 56699999999999999
No 392
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.88 E-value=6e-11 Score=110.33 Aligned_cols=145 Identities=14% Similarity=0.103 Sum_probs=69.6
Q ss_pred CcccccceecCCC--cEeEEEeCC---CCCccccChhhhcCCCCCCEEEeecCcccccCC--CCcCCCCCcE--EEccCC
Q 012745 37 VCKWQGIKECLNG--RVTKLVLEH---LNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP--NLLGLVNLKS--LYLNDN 107 (457)
Q Consensus 37 ~c~~~gv~~c~~~--~l~~L~L~~---n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~~l~~L~~--L~Ls~N 107 (457)
.|+|.|+. |... ++..+-... ..+.+.++++.+..++. .|...+|.-++..+ .|...+.|.. ++++.|
T Consensus 77 l~~~~g~i-~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N 153 (267)
T 3rw6_A 77 LKAVNYKI-LDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLN 153 (267)
T ss_dssp HHHTTSSC-BCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTT
T ss_pred HHhcCcEE-ECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCC
Confidence 58999999 8753 565554433 23334555544433332 12222222222221 1333333443 445555
Q ss_pred ccc---cCCCccCCCCCCCCEEEeeccccCC--CCcccccCCCccceeecccccccCCCCCCCCC--CCcEEEeecCcce
Q 012745 108 NFS---GKFPGSLSSLHRLKIIVLANNQISG--PIPESLSNLKRLYMLYLQDNKFTGPIPPFNQT--NLRFFNVSNNDLS 180 (457)
Q Consensus 108 ~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~~--~L~~L~l~~N~l~ 180 (457)
+.. ..++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++......+. +|+.|+|++|.++
T Consensus 154 ~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l~L~~L~L~~Npl~ 233 (267)
T 3rw6_A 154 RRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLC 233 (267)
T ss_dssp SHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTSCCSEEECTTSTTG
T ss_pred HHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccCCcceEEccCCcCc
Confidence 332 1111112345566666666666654 22344455666666666666666541111122 6666777777766
Q ss_pred ecCC
Q 012745 181 GQIP 184 (457)
Q Consensus 181 ~~~p 184 (457)
+..|
T Consensus 234 ~~~~ 237 (267)
T 3rw6_A 234 DTFR 237 (267)
T ss_dssp GGCS
T ss_pred cccC
Confidence 6554
No 393
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.88 E-value=2.1e-09 Score=111.57 Aligned_cols=103 Identities=12% Similarity=-0.022 Sum_probs=71.3
Q ss_pred cccCCccEEEEEE-ecCCcEEEEEEccccCc----------ccHHHHHHHHHHHccC-CCCCCCcceeeeecCCceEEEE
Q 012745 343 LGRGTIGSTYKAV-LESGFIVTVKRLKDARY----------PRLEEFRRHMDILGRL-RHPNLVPLRAYFQAKEERLLVY 410 (457)
Q Consensus 343 lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~----------~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 410 (457)
.+.|++|.+..+. +-.|+.++||++..... ...++|.+|+++|+++ .|+||+++++++.+++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4566666665554 44588999999975421 2245799999999999 6999999999999999999999
Q ss_pred EecCCCchHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 411 DYFPNGSLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 411 ey~~~GsL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
||++||+|.++|....... ..-+. .||+.+++++|
T Consensus 322 Eyv~G~~L~d~i~~~~~l~---~~~I~---~QIl~AL~ylH 356 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGEEID---REKIL---GSLLRSLAALE 356 (569)
T ss_dssp ECCCSEEHHHHHHTTCCCC---HHHHH---HHHHHHHHHHH
T ss_pred ecCCCCcHHHHHHhCCCCC---HHHHH---HHHHHHHHHHH
Confidence 9999999999998754222 12233 45666655543
No 394
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.84 E-value=1.3e-10 Score=121.26 Aligned_cols=153 Identities=11% Similarity=0.039 Sum_probs=107.9
Q ss_pred CcEeEEEeC-----------CCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcC-CCCCcEEEcc----CCcccc
Q 012745 49 GRVTKLVLE-----------HLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLG-LVNLKSLYLN----DNNFSG 111 (457)
Q Consensus 49 ~~l~~L~L~-----------~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~-l~~L~~L~Ls----~N~l~~ 111 (457)
++|++|+|+ .|.+++.-....+..+++|+.|+|+.|.+++... .+.. +++|+.|+|+ .|++++
T Consensus 342 ~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~ 421 (592)
T 3ogk_B 342 KQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITD 421 (592)
T ss_dssp TTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSS
T ss_pred CCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccC
Confidence 579999999 3666633223345678999999999999987655 5554 8899999996 778885
Q ss_pred C-----CCccCCCCCCCCEEEeecc--ccCCCCccccc-CCCccceeecccccccCC-CCCC--CCCCCcEEEeecCcce
Q 012745 112 K-----FPGSLSSLHRLKIIVLANN--QISGPIPESLS-NLKRLYMLYLQDNKFTGP-IPPF--NQTNLRFFNVSNNDLS 180 (457)
Q Consensus 112 ~-----~p~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~-~~~~--~~~~L~~L~l~~N~l~ 180 (457)
. ++..+.++++|+.|+|++| .+++..+..+. .+++|++|+|++|++++. ++.. .+++|+.|+|++|.++
T Consensus 422 ~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~ 501 (592)
T 3ogk_B 422 LPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFS 501 (592)
T ss_dssp CCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCB
T ss_pred chHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCc
Confidence 3 2233667889999999854 36654444443 478899999999988752 2222 6788999999999986
Q ss_pred ec-CC-CchhhhccCccccccCc
Q 012745 181 GQ-IP-VTPALVRFNASSFLLNI 201 (457)
Q Consensus 181 ~~-~p-~~~~l~~l~~~~~~~n~ 201 (457)
+. ++ ....++++..+.+.+|.
T Consensus 502 ~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 502 ERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp HHHHHHHHHHCSSCCEEEEESCB
T ss_pred HHHHHHHHHhcCccCeeECcCCc
Confidence 43 22 11345677788888876
No 395
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.79 E-value=1.4e-10 Score=120.97 Aligned_cols=152 Identities=13% Similarity=0.058 Sum_probs=105.9
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEee-----------cCcccccCC--CCcCCCCCcEEEccCCccccCCCc
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFK-----------GNSISGQIP--NLLGLVNLKSLYLNDNNFSGKFPG 115 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~-----------~N~l~~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~ 115 (457)
++|++|+|+ +.+.....+..+..+++|+.|+|+ .|.++.... .+.++++|++|+++.|++++..+.
T Consensus 318 ~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~ 396 (592)
T 3ogk_B 318 PNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLE 396 (592)
T ss_dssp TTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHH
T ss_pred cCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHH
Confidence 679999998 555433333356778899999999 467764322 244689999999999999876666
Q ss_pred cCCC-CCCCCEEEee----ccccCCC-----CcccccCCCccceeecccc--cccCCCCCC---CCCCCcEEEeecCcce
Q 012745 116 SLSS-LHRLKIIVLA----NNQISGP-----IPESLSNLKRLYMLYLQDN--KFTGPIPPF---NQTNLRFFNVSNNDLS 180 (457)
Q Consensus 116 ~~~~-l~~L~~L~Ls----~N~l~~~-----~p~~~~~l~~L~~L~l~~N--~l~~~~~~~---~~~~L~~L~l~~N~l~ 180 (457)
.+.. +++|+.|+|+ .|.+++. ++..+..+++|++|+|++| .+++..... .+++|+.|+|++|+++
T Consensus 397 ~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~ 476 (592)
T 3ogk_B 397 SIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGES 476 (592)
T ss_dssp HHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSS
T ss_pred HHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCC
Confidence 6655 8899999996 7778753 3334677899999999753 354332221 4788999999999987
Q ss_pred ec-CC-CchhhhccCccccccCc
Q 012745 181 GQ-IP-VTPALVRFNASSFLLNI 201 (457)
Q Consensus 181 ~~-~p-~~~~l~~l~~~~~~~n~ 201 (457)
+. ++ ....+++|..+.+.+|+
T Consensus 477 ~~~~~~~~~~~~~L~~L~l~~n~ 499 (592)
T 3ogk_B 477 DEGLMEFSRGCPNLQKLEMRGCC 499 (592)
T ss_dssp HHHHHHHHTCCTTCCEEEEESCC
T ss_pred HHHHHHHHhcCcccCeeeccCCC
Confidence 52 22 11234667788888887
No 396
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.63 E-value=1.6e-07 Score=92.97 Aligned_cols=125 Identities=13% Similarity=0.118 Sum_probs=67.8
Q ss_pred cEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEe
Q 012745 50 RVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVL 128 (457)
Q Consensus 50 ~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 128 (457)
+|+.++|++|+++ .|+...|. ..+|+.+.|.+| ++.+.. .|.++++|+.++|..| ++.+-...|.+ .+|+.+.|
T Consensus 181 ~L~~l~l~~n~l~-~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l 255 (401)
T 4fdw_A 181 NLKKADLSKTKIT-KLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL 255 (401)
T ss_dssp TCCEEECTTSCCS-EECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE
T ss_pred cCCeeecCCCcce-EechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe
Confidence 4566666666555 55555554 355555555533 444444 5666666666666553 33333444444 45555555
Q ss_pred eccccCCCCcccccCCCccceeeccccccc-----CCCCCC--CCCCCcEEEeecCccee
Q 012745 129 ANNQISGPIPESLSNLKRLYMLYLQDNKFT-----GPIPPF--NQTNLRFFNVSNNDLSG 181 (457)
Q Consensus 129 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-----~~~~~~--~~~~L~~L~l~~N~l~~ 181 (457)
.|.++.+....|..+++|+.+++.+|.+. ...+.. .+++|+.++|.+ .++.
T Consensus 256 -p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~ 313 (401)
T 4fdw_A 256 -PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRI 313 (401)
T ss_dssp -ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCE
T ss_pred -CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEE
Confidence 33444444566777777777777776654 111111 566677776663 3443
No 397
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.62 E-value=8e-10 Score=115.27 Aligned_cols=153 Identities=10% Similarity=0.050 Sum_probs=100.4
Q ss_pred CcEeEEEe---------CCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCc-CCCCCcEEEcc--C----Ccccc
Q 012745 49 GRVTKLVL---------EHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLL-GLVNLKSLYLN--D----NNFSG 111 (457)
Q Consensus 49 ~~l~~L~L---------~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~-~l~~L~~L~Ls--~----N~l~~ 111 (457)
++|++|+| +.+.+++.........+++|+.|.++.|.+++... .+. .+++|+.|+|+ + |+++.
T Consensus 338 ~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~ 417 (594)
T 2p1m_B 338 KDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTL 417 (594)
T ss_dssp TTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTC
T ss_pred CCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccC
Confidence 67899988 33555532222223457889999888888876554 443 58889999998 4 56663
Q ss_pred CCC-----ccCCCCCCCCEEEeeccccCCCCcccccC-CCccceeecccccccCCCCCC---CCCCCcEEEeecCcceec
Q 012745 112 KFP-----GSLSSLHRLKIIVLANNQISGPIPESLSN-LKRLYMLYLQDNKFTGPIPPF---NQTNLRFFNVSNNDLSGQ 182 (457)
Q Consensus 112 ~~p-----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~l~~N~l~~~~~~~---~~~~L~~L~l~~N~l~~~ 182 (457)
... ..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..... .+++|+.|+|++|.+++.
T Consensus 418 ~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~ 496 (594)
T 2p1m_B 418 EPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDK 496 (594)
T ss_dssp CCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHH
T ss_pred CchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHH
Confidence 211 1255678888888876 565444445554 788888888888876432221 478888888888888543
Q ss_pred CC--CchhhhccCccccccCcC
Q 012745 183 IP--VTPALVRFNASSFLLNIN 202 (457)
Q Consensus 183 ~p--~~~~l~~l~~~~~~~n~~ 202 (457)
.. ....++++..+.+.+|+.
T Consensus 497 ~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 497 ALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHHTGGGGGGSSEEEEESSCC
T ss_pred HHHHHHHhCCCCCEEeeeCCCC
Confidence 22 223456777777777754
No 398
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.58 E-value=1.9e-07 Score=92.44 Aligned_cols=129 Identities=11% Similarity=0.118 Sum_probs=100.6
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccc-----cCCCccCCCCCC
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFS-----GKFPGSLSSLHR 122 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~ 122 (457)
.+|+.|+|..| ++ .|+...|.+ .+|+.+.| .|.++.+.. .|.++++|+.+++.+|.+. .+.+..|.++++
T Consensus 226 ~~L~~l~l~~~-l~-~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~ 301 (401)
T 4fdw_A 226 SQLKTIEIPEN-VS-TIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPK 301 (401)
T ss_dssp TTCCCEECCTT-CC-EECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTT
T ss_pred CCCCEEecCCC-cc-Ccccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCcc
Confidence 46888999874 66 788888888 78999999 455776666 8889999999999888775 466678999999
Q ss_pred CCEEEeeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEeecCcceecCC
Q 012745 123 LKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDLSGQIP 184 (457)
Q Consensus 123 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l~~~~p 184 (457)
|+.++|. |.++.+....|..|++|+.|+|.+| ++.+.... .+ +|+.|++++|.+....+
T Consensus 302 L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~ 362 (401)
T 4fdw_A 302 LARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFE 362 (401)
T ss_dssp CCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCC
T ss_pred CCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCccccc
Confidence 9999998 4577667788999999999999665 55443333 56 89999999987765443
No 399
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.57 E-value=2.9e-09 Score=110.98 Aligned_cols=152 Identities=11% Similarity=0.026 Sum_probs=105.1
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEee---------cCcccccCC-CCc-CCCCCcEEEccCCccccCCCccC
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFK---------GNSISGQIP-NLL-GLVNLKSLYLNDNNFSGKFPGSL 117 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~---------~N~l~~~~~-~~~-~l~~L~~L~Ls~N~l~~~~p~~~ 117 (457)
++|++|+|++| +.....+.....+++|+.|+|+ .|.++.... .+. ++++|+.|+++.|++++.....+
T Consensus 314 ~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l 392 (594)
T 2p1m_B 314 PKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITI 392 (594)
T ss_dssp TTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHH
T ss_pred CCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHH
Confidence 68999999988 5422222244568999999994 356654332 333 48999999999999986555555
Q ss_pred C-CCCCCCEEEee--c----cccCCCCc-----ccccCCCccceeecccccccCCCCCC---CCCCCcEEEeecCcceec
Q 012745 118 S-SLHRLKIIVLA--N----NQISGPIP-----ESLSNLKRLYMLYLQDNKFTGPIPPF---NQTNLRFFNVSNNDLSGQ 182 (457)
Q Consensus 118 ~-~l~~L~~L~Ls--~----N~l~~~~p-----~~~~~l~~L~~L~l~~N~l~~~~~~~---~~~~L~~L~l~~N~l~~~ 182 (457)
. .+++|+.|+|+ + |.+++... ..+..+++|+.|+|++ .+++..... .+++|+.|+|++|.+++.
T Consensus 393 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~ 471 (594)
T 2p1m_B 393 ARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDL 471 (594)
T ss_dssp HHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHH
T ss_pred HhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHH
Confidence 4 58999999999 4 56663221 2266789999999977 555322221 378899999999998754
Q ss_pred CCC--chhhhccCccccccCcC
Q 012745 183 IPV--TPALVRFNASSFLLNIN 202 (457)
Q Consensus 183 ~p~--~~~l~~l~~~~~~~n~~ 202 (457)
.+. ...+++|..+.+.+|+.
T Consensus 472 ~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 472 GMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp HHHHHHHHCTTCCEEEEESCSC
T ss_pred HHHHHHhcCCCcCEEECcCCCC
Confidence 321 12356788888888875
No 400
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.57 E-value=5.6e-09 Score=96.98 Aligned_cols=102 Identities=20% Similarity=0.218 Sum_probs=60.9
Q ss_pred hcCCCCCCE--EEeecCcccccC---C-CCcCCCCCcEEEccCCcccc--CCCccCCCCCCCCEEEeeccccCCCCcccc
Q 012745 70 INQLDQLRV--LSFKGNSISGQI---P-NLLGLVNLKSLYLNDNNFSG--KFPGSLSSLHRLKIIVLANNQISGPIPESL 141 (457)
Q Consensus 70 ~~~l~~L~~--L~L~~N~l~~~~---~-~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 141 (457)
|...+.|.. ++++.|+..... . ...++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 333344444 566666443222 1 12356777777777777775 3345556677777777777777754 234
Q ss_pred cCCC--ccceeecccccccCCCCCC---------CCCCCcEEE
Q 012745 142 SNLK--RLYMLYLQDNKFTGPIPPF---------NQTNLRFFN 173 (457)
Q Consensus 142 ~~l~--~L~~L~l~~N~l~~~~~~~---------~~~~L~~L~ 173 (457)
..+. +|++|+|++|.+.+.+|.. .+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 4444 7777777777777655421 566776664
No 401
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.52 E-value=4.3e-09 Score=92.74 Aligned_cols=110 Identities=16% Similarity=0.174 Sum_probs=59.6
Q ss_pred CCCcEeEEEeCCC-CCcc----ccChhhhcCCCCCCEEEeecCcccccCC-----CCcCCCCCcEEEccCCccccC----
Q 012745 47 LNGRVTKLVLEHL-NLTG----TLDEKVINQLDQLRVLSFKGNSISGQIP-----NLLGLVNLKSLYLNDNNFSGK---- 112 (457)
Q Consensus 47 ~~~~l~~L~L~~n-~l~~----~l~~~~~~~l~~L~~L~L~~N~l~~~~~-----~~~~l~~L~~L~Ls~N~l~~~---- 112 (457)
..+.|++|+|++| .|.. .+. ..+...++|++|+|++|.|..... .+...++|++|+|++|.|+..
T Consensus 34 ~~~~L~~L~L~~n~~i~~~g~~~l~-~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~ 112 (185)
T 1io0_A 34 NDPDLEEVNLNNIMNIPVPTLKACA-EALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILA 112 (185)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHH-HHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHH
T ss_pred cCCCCCEEEecCCCCCCHHHHHHHH-HHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHH
Confidence 3456777888877 7662 121 245556677777777777754221 233446677777777776632
Q ss_pred CCccCCCCCCCCEEEe--eccccCCC----CcccccCCCccceeecccccc
Q 012745 113 FPGSLSSLHRLKIIVL--ANNQISGP----IPESLSNLKRLYMLYLQDNKF 157 (457)
Q Consensus 113 ~p~~~~~l~~L~~L~L--s~N~l~~~----~p~~~~~l~~L~~L~l~~N~l 157 (457)
+...+...++|++|+| ++|.|... +...+...++|++|+|++|.+
T Consensus 113 l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 113 LVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 2334455556666666 55665422 112223334455555554444
No 402
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.51 E-value=7.1e-09 Score=91.34 Aligned_cols=114 Identities=18% Similarity=0.176 Sum_probs=88.5
Q ss_pred hhhcCCCCCCEEEeecC-cccccC-----CCCcCCCCCcEEEccCCccccC----CCccCCCCCCCCEEEeeccccCCC-
Q 012745 68 KVINQLDQLRVLSFKGN-SISGQI-----PNLLGLVNLKSLYLNDNNFSGK----FPGSLSSLHRLKIIVLANNQISGP- 136 (457)
Q Consensus 68 ~~~~~l~~L~~L~L~~N-~l~~~~-----~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~- 136 (457)
..+...++|+.|+|++| .|.... ..+...++|++|+|++|+|+.. +...+...++|++|+|++|.|...
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 36778899999999999 887432 1456688999999999999842 334455678999999999999743
Q ss_pred ---CcccccCCCccceeec--ccccccCCCCC----C--CCCCCcEEEeecCccee
Q 012745 137 ---IPESLSNLKRLYMLYL--QDNKFTGPIPP----F--NQTNLRFFNVSNNDLSG 181 (457)
Q Consensus 137 ---~p~~~~~l~~L~~L~l--~~N~l~~~~~~----~--~~~~L~~L~l~~N~l~~ 181 (457)
+...+...++|++|+| ++|.|...-.. . ..++|+.|+|++|.+..
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~~ 165 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQGP 165 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHHH
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCCh
Confidence 3456778889999999 88998742111 1 45789999999999863
No 403
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.51 E-value=2.8e-08 Score=96.94 Aligned_cols=149 Identities=17% Similarity=0.166 Sum_probs=89.7
Q ss_pred CcEeEEEeCCCCCc---------cccChhhhcCCCCCCEEEeecCc-ccccCCCCcCCCCCcEEEccCCccccCCCccC-
Q 012745 49 GRVTKLVLEHLNLT---------GTLDEKVINQLDQLRVLSFKGNS-ISGQIPNLLGLVNLKSLYLNDNNFSGKFPGSL- 117 (457)
Q Consensus 49 ~~l~~L~L~~n~l~---------~~l~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~- 117 (457)
++|+.|.+..+... +.+. ..+..+++|+.|+|++|. +. .. .+ .+++|+.|+|..|.++......+
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~-~ll~~~P~L~~L~L~g~~~l~-l~-~~-~~~~L~~L~L~~~~l~~~~l~~l~ 214 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLS-PVLDAMPLLNNLKIKGTNNLS-IG-KK-PRPNLKSLEIISGGLPDSVVEDIL 214 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCH-HHHHTCTTCCEEEEECCBTCB-CC-SC-BCTTCSEEEEECSBCCHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHH-HHHhcCCCCcEEEEeCCCCce-ec-cc-cCCCCcEEEEecCCCChHHHHHHH
Confidence 57888888665431 1232 356778888888888873 32 22 23 37888888888887764322223
Q ss_pred -CCCCCCCEEEeec--cccCCC-----Ccccc--cCCCccceeecccccccCCCCC-----CCCCCCcEEEeecCcceec
Q 012745 118 -SSLHRLKIIVLAN--NQISGP-----IPESL--SNLKRLYMLYLQDNKFTGPIPP-----FNQTNLRFFNVSNNDLSGQ 182 (457)
Q Consensus 118 -~~l~~L~~L~Ls~--N~l~~~-----~p~~~--~~l~~L~~L~l~~N~l~~~~~~-----~~~~~L~~L~l~~N~l~~~ 182 (457)
..+++|+.|+|+. |...+. +...+ ..+++|++|+|++|.+.+..+. ..+++|+.|+|+.|.|.+.
T Consensus 215 ~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~ 294 (362)
T 2ra8_A 215 GSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDE 294 (362)
T ss_dssp HSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHH
T ss_pred HccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChH
Confidence 2678888888863 222111 01122 2468888888888887632211 1467888888888888752
Q ss_pred ----CC-CchhhhccCccccccCc
Q 012745 183 ----IP-VTPALVRFNASSFLLNI 201 (457)
Q Consensus 183 ----~p-~~~~l~~l~~~~~~~n~ 201 (457)
++ ....++.|..+.+.+|.
T Consensus 295 G~~~L~~~L~~l~~L~~L~L~~n~ 318 (362)
T 2ra8_A 295 GARLLLDHVDKIKHLKFINMKYNY 318 (362)
T ss_dssp HHHHHHTTHHHHTTCSEEECCSBB
T ss_pred HHHHHHhhcccCCcceEEECCCCc
Confidence 22 12445666767666654
No 404
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.49 E-value=5.5e-08 Score=94.84 Aligned_cols=129 Identities=18% Similarity=0.249 Sum_probs=70.3
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCc--CCCCCcEEEccC--CccccC-----CCccC-
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLL--GLVNLKSLYLND--NNFSGK-----FPGSL- 117 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~--~l~~L~~L~Ls~--N~l~~~-----~p~~~- 117 (457)
++|+.|+|++|.-. .+++ +. +++|+.|+|..|.++.... .+. .+++|+.|+|+. |...+. +...+
T Consensus 172 P~L~~L~L~g~~~l-~l~~--~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~ 247 (362)
T 2ra8_A 172 PLLNNLKIKGTNNL-SIGK--KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFS 247 (362)
T ss_dssp TTCCEEEEECCBTC-BCCS--CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSC
T ss_pred CCCcEEEEeCCCCc-eecc--cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHh
Confidence 56777777666212 3332 32 6677777777776653322 222 567777777643 221111 11122
Q ss_pred -CCCCCCCEEEeeccccCCCCccccc---CCCccceeecccccccCC----CCCC--CCCCCcEEEeecCccee
Q 012745 118 -SSLHRLKIIVLANNQISGPIPESLS---NLKRLYMLYLQDNKFTGP----IPPF--NQTNLRFFNVSNNDLSG 181 (457)
Q Consensus 118 -~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~l~~N~l~~~----~~~~--~~~~L~~L~l~~N~l~~ 181 (457)
..+++|+.|+|++|.+.+..+..+. .+++|++|+|+.|.|++. ++.. .+++|+.|+|++|.|+.
T Consensus 248 ~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 248 KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 2466777777777776533222222 466777777777776642 1111 45667777777776653
No 405
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=98.48 E-value=1.3e-07 Score=87.91 Aligned_cols=80 Identities=14% Similarity=0.146 Sum_probs=57.6
Q ss_pred hcccccCCccEEEEEEe-cCCcE--EEEEEccccCcc------------------------cHHHHHHHHHHHccCCCCC
Q 012745 340 AETLGRGTIGSTYKAVL-ESGFI--VTVKRLKDARYP------------------------RLEEFRRHMDILGRLRHPN 392 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~-~~g~~--vavK~l~~~~~~------------------------~~~~~~~E~~~l~~l~H~n 392 (457)
.+.||+|+||.||+|.. .+|+. ||||+++..... ....+.+|+..+.++.|++
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 131 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAG 131 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCC
Confidence 35799999999999996 78999 999987543211 0135789999999998886
Q ss_pred CC--cceeeeecCCceEEEEEecCC-C----chHHHhh
Q 012745 393 LV--PLRAYFQAKEERLLVYDYFPN-G----SLFSLIH 423 (457)
Q Consensus 393 iv--~l~~~~~~~~~~~lv~ey~~~-G----sL~~~l~ 423 (457)
+. .++++ ...++||||+.+ | +|.++..
T Consensus 132 i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~ 165 (258)
T 1zth_A 132 VSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGR 165 (258)
T ss_dssp CCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGG
T ss_pred CCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhh
Confidence 53 33332 356899999952 4 6766654
No 406
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=98.40 E-value=3.5e-07 Score=91.03 Aligned_cols=111 Identities=14% Similarity=0.092 Sum_probs=71.1
Q ss_pred hcccccCCccEEEEEE-ecCCcEEEEEEccccCc---ccHHHHHHHHHHHccCCC-CCCCccee---------e------
Q 012745 340 AETLGRGTIGSTYKAV-LESGFIVTVKRLKDARY---PRLEEFRRHMDILGRLRH-PNLVPLRA---------Y------ 399 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~-~~~g~~vavK~l~~~~~---~~~~~~~~E~~~l~~l~H-~niv~l~~---------~------ 399 (457)
.++||+|+||.||+|. ..+|+.||||+++.... ...+.|.+|+.++..++| +|...... .
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 162 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC-
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCC
Confidence 4689999999999999 67799999999984432 235779999999999987 32211111 1
Q ss_pred ------eec-----CCceEEEEEecCCCchHHHhhhCC--CCCCchhhHHHH--HHHHHHHHHHhcC
Q 012745 400 ------FQA-----KEERLLVYDYFPNGSLFSLIHGTC--CLATRPLFIFLF--SFFRLIKKVFQMS 451 (457)
Q Consensus 400 ------~~~-----~~~~~lv~ey~~~GsL~~~l~~~~--~~~~~~l~~~~r--~~~~i~~~v~~~~ 451 (457)
+.. ....+++|+++ +|+|.+++.... ......++|..+ .+.|++.++++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 228 (413)
T 3dzo_A 163 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH 228 (413)
T ss_dssp --------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 111 12346677765 489999985210 012344565554 3357777776654
No 407
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=98.27 E-value=5.7e-07 Score=87.82 Aligned_cols=82 Identities=11% Similarity=0.076 Sum_probs=52.0
Q ss_pred hcccccCCccEEEEEEecCCcEEEEEEccccCc--------------ccHHHH--------HHHHHHHccCCCCCCCcce
Q 012745 340 AETLGRGTIGSTYKAVLESGFIVTVKRLKDARY--------------PRLEEF--------RRHMDILGRLRHPNLVPLR 397 (457)
Q Consensus 340 ~~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~--------------~~~~~~--------~~E~~~l~~l~H~niv~l~ 397 (457)
...||+|+||.||+|...+|+.||||+++.... ...... ..|...|.++.+..+.-..
T Consensus 100 ~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~ 179 (397)
T 4gyi_A 100 GSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPE 179 (397)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCC
T ss_pred cCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCe
Confidence 468999999999999988899999998764210 011122 2355555555444332211
Q ss_pred eeeecCCceEEEEEecCCCchHHHhh
Q 012745 398 AYFQAKEERLLVYDYFPNGSLFSLIH 423 (457)
Q Consensus 398 ~~~~~~~~~~lv~ey~~~GsL~~~l~ 423 (457)
-+.. ...+|||||+++++|.++..
T Consensus 180 p~~~--~~~~LVME~i~G~~L~~l~~ 203 (397)
T 4gyi_A 180 PIAQ--SRHTIVMSLVDALPMRQVSS 203 (397)
T ss_dssp EEEE--ETTEEEEECCSCEEGGGCCC
T ss_pred eeec--cCceEEEEecCCccHhhhcc
Confidence 1111 12379999999999876643
No 408
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.84 E-value=4.6e-05 Score=75.05 Aligned_cols=112 Identities=12% Similarity=0.133 Sum_probs=70.7
Q ss_pred ccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEeeccccCCCCccccc
Q 012745 64 TLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLS 142 (457)
Q Consensus 64 ~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 142 (457)
.+....|.+...|+.+.+.++..+ +.. .|.++++|+.+.+. +.++.+....|.++.+|+.++|..| ++.+-..+|.
T Consensus 255 ~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~ 331 (394)
T 4gt6_A 255 RIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFA 331 (394)
T ss_dssp EECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT
T ss_pred EcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhh
Confidence 455556777777777777665443 333 67777777777775 4455455566777777777777654 4444456677
Q ss_pred CCCccceeecccccccCCCCCC--CCCCCcEEEeecCcc
Q 012745 143 NLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVSNNDL 179 (457)
Q Consensus 143 ~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~~N~l 179 (457)
+|.+|+.+.|..+ ++...... .+.+|+.+++.+|..
T Consensus 332 ~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 332 GCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred CCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 7777777777544 44222222 667777777776644
No 409
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.82 E-value=2.8e-06 Score=73.35 Aligned_cols=81 Identities=11% Similarity=0.086 Sum_probs=36.1
Q ss_pred cEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCc-ccccCC-CCcCC----CCCcEEEccCCc-cccCCCccCCCCCC
Q 012745 50 RVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNS-ISGQIP-NLLGL----VNLKSLYLNDNN-FSGKFPGSLSSLHR 122 (457)
Q Consensus 50 ~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~-l~~~~~-~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 122 (457)
+|++|||+++.|+.. --..+..+++|+.|+|+++. |+..-- .+..+ ++|++|+|++|. ||..--..+..+++
T Consensus 62 ~L~~LDLs~~~Itd~-GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 62 KIQAIDATDSCIMSI-GFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CEEEEEEESCCCCGG-GGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred eEeEEeCcCCCccHH-HHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 466666666665521 11234555556666665553 442211 23332 245555555542 44221122334444
Q ss_pred CCEEEeecc
Q 012745 123 LKIIVLANN 131 (457)
Q Consensus 123 L~~L~Ls~N 131 (457)
|+.|+|+++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 444444444
No 410
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.70 E-value=1.1e-05 Score=69.57 Aligned_cols=85 Identities=14% Similarity=0.161 Sum_probs=66.4
Q ss_pred CCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCc-cccCCCccCCCC----CCCCEEEeeccc-cCCCCcccccCCCc
Q 012745 74 DQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNN-FSGKFPGSLSSL----HRLKIIVLANNQ-ISGPIPESLSNLKR 146 (457)
Q Consensus 74 ~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 146 (457)
-.|+.|||+++.|+...- .+.++++|+.|+|++|. |+..--..+..+ ++|+.|+|+++. |+..--..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999886544 67899999999999995 774322334554 479999999985 77544456788999
Q ss_pred cceeeccccc-cc
Q 012745 147 LYMLYLQDNK-FT 158 (457)
Q Consensus 147 L~~L~l~~N~-l~ 158 (457)
|++|+|+++. ++
T Consensus 141 L~~L~L~~c~~It 153 (176)
T 3e4g_A 141 LKYLFLSDLPGVK 153 (176)
T ss_dssp CCEEEEESCTTCC
T ss_pred CCEEECCCCCCCC
Confidence 9999999985 44
No 411
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.64 E-value=0.00015 Score=70.82 Aligned_cols=88 Identities=17% Similarity=0.141 Sum_probs=44.1
Q ss_pred cChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccC
Q 012745 65 LDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSN 143 (457)
Q Consensus 65 l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 143 (457)
+....|.+...|+.+.+..+ ++.+.. .|.++.+|+.+.+..+ ++.+....|.++.+|+.+.+.+|.++.+....|.+
T Consensus 231 i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~ 308 (379)
T 4h09_A 231 LGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMD 308 (379)
T ss_dssp ECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTT
T ss_pred EccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcC
Confidence 34444555555555555444 333333 4555555555555433 33333444555555555555555554444445555
Q ss_pred CCccceeeccc
Q 012745 144 LKRLYMLYLQD 154 (457)
Q Consensus 144 l~~L~~L~l~~ 154 (457)
+.+|+.+.|..
T Consensus 309 c~~L~~i~lp~ 319 (379)
T 4h09_A 309 CVKLSSVTLPT 319 (379)
T ss_dssp CTTCCEEECCT
T ss_pred CCCCCEEEcCc
Confidence 55555555543
No 412
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=97.58 E-value=0.0003 Score=64.82 Aligned_cols=103 Identities=10% Similarity=-0.062 Sum_probs=73.6
Q ss_pred cccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCC-CCCCCcceeeeecCCceEEEEEecCCCchH
Q 012745 341 ETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLR-HPNLVPLRAYFQAKEERLLVYDYFPNGSLF 419 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ey~~~GsL~ 419 (457)
...+.|+.+.||++... ++.+++|............+.+|.+++..+. |..+.++++++...+..|+||||++|.+|.
T Consensus 20 ~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 98 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS 98 (263)
T ss_dssp ECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred eeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehh
Confidence 35677778899998755 6889999987532223345889999998884 677889999998888899999999999998
Q ss_pred HHhhhCCCCCCchhhHHHHHHHHHHHHHHh
Q 012745 420 SLIHGTCCLATRPLFIFLFSFFRLIKKVFQ 449 (457)
Q Consensus 420 ~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~ 449 (457)
+.+.... ...-..+++.+++..+++
T Consensus 99 ~~~~~~~-----~~~~~~~~l~~~l~~LH~ 123 (263)
T 3tm0_A 99 EEYEDEQ-----SPEKIIELYAECIRLFHS 123 (263)
T ss_dssp HHCCTTT-----CHHHHHHHHHHHHHHHHH
T ss_pred hccCCcc-----cHHHHHHHHHHHHHHHhC
Confidence 7642211 112233444556666665
No 413
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.57 E-value=0.00017 Score=70.42 Aligned_cols=103 Identities=13% Similarity=0.180 Sum_probs=86.8
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEE
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIV 127 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 127 (457)
..|+.+.+..+ ++ .|....|.+..+|+.+.+..+ ++.+.. .|.++.+|+.+.+.++.++.+-...|.++.+|+.++
T Consensus 240 ~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~ 316 (379)
T 4h09_A 240 KALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVT 316 (379)
T ss_dssp SSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEE
T ss_pred ccceEEEcCCC-cc-EeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEE
Confidence 46788888765 66 788889999999999999765 665666 899999999999999999977788999999999999
Q ss_pred eeccccCCCCcccccCCCccceeecccc
Q 012745 128 LANNQISGPIPESLSNLKRLYMLYLQDN 155 (457)
Q Consensus 128 Ls~N~l~~~~p~~~~~l~~L~~L~l~~N 155 (457)
|..+ ++.+-..+|.++++|+.+.+..+
T Consensus 317 lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 317 LPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred cCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 9765 66566778999999999988655
No 414
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.49 E-value=0.00029 Score=69.28 Aligned_cols=89 Identities=13% Similarity=0.232 Sum_probs=45.1
Q ss_pred cChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEeeccccCCCCcccccC
Q 012745 65 LDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSN 143 (457)
Q Consensus 65 l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 143 (457)
+....|.+...|+.+.+. +.++.+.. .|.++.+|+.++|..+ ++.+-...|.++.+|+.+.|..+ ++.+-..+|.+
T Consensus 279 I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~ 355 (394)
T 4gt6_A 279 IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSN 355 (394)
T ss_dssp ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTT
T ss_pred ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhC
Confidence 444455555555555553 33443444 5555555555555433 44344445555555555555433 44344445555
Q ss_pred CCccceeeccccc
Q 012745 144 LKRLYMLYLQDNK 156 (457)
Q Consensus 144 l~~L~~L~l~~N~ 156 (457)
+++|+.+++.+|.
T Consensus 356 C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 356 CTALNNIEYSGSR 368 (394)
T ss_dssp CTTCCEEEESSCH
T ss_pred CCCCCEEEECCce
Confidence 5555555555554
No 415
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.47 E-value=0.00042 Score=65.07 Aligned_cols=74 Identities=19% Similarity=0.162 Sum_probs=59.5
Q ss_pred cccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCC---CCCcceeeeecCCceEEEEEecCCCc
Q 012745 341 ETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHP---NLVPLRAYFQAKEERLLVYDYFPNGS 417 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~lv~ey~~~Gs 417 (457)
+.++.|.++.||++...+|+.++||+...........|.+|.+.|+.+++. .+++++++. ..++||||+++++
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 468999999999999888999999997654333456789999999999875 567777653 3699999999876
Q ss_pred h
Q 012745 418 L 418 (457)
Q Consensus 418 L 418 (457)
+
T Consensus 97 ~ 97 (288)
T 3d1u_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 4
No 416
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.44 E-value=0.00048 Score=67.69 Aligned_cols=121 Identities=15% Similarity=0.074 Sum_probs=58.7
Q ss_pred CcEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcC---------------------CCCCcEEEccC
Q 012745 49 GRVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLG---------------------LVNLKSLYLND 106 (457)
Q Consensus 49 ~~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~---------------------l~~L~~L~Ls~ 106 (457)
..++.+.+... ++ .+....|.....|+.+.+..+..+ +.. .|.. +.+|+.+.+..
T Consensus 230 ~~l~~i~ip~~-~~-~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~~~F~~~~~L~~i~l~~ 306 (394)
T 4fs7_A 230 TGVKNIIIPDS-FT-ELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPEKTFYGCSSLTEVKLLD 306 (394)
T ss_dssp CCCCEEEECTT-CC-EECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECTTTTTTCTTCCEEEECT
T ss_pred CCCceEEECCC-ce-ecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeecccccccccccccccccc
Confidence 35666666532 33 455556666677777776665443 222 4444 44555554443
Q ss_pred CccccCCCccCCCCCCCCEEEeeccccCCCCcccccCCCccceeecccccccCCCCCC--CCCCCcEEEee
Q 012745 107 NNFSGKFPGSLSSLHRLKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKFTGPIPPF--NQTNLRFFNVS 175 (457)
Q Consensus 107 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~L~~L~l~ 175 (457)
+ ++.+-...|.++.+|+.++|.++ ++.+-..+|.++.+|+.+++..| ++...... .+.+|+.+++.
T Consensus 307 ~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 307 S-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELP 374 (394)
T ss_dssp T-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEE
T ss_pred c-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEEC
Confidence 3 33333444555555555555432 33333445555555555555444 33222221 44555555544
No 417
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.40 E-value=0.00023 Score=70.02 Aligned_cols=99 Identities=12% Similarity=0.028 Sum_probs=79.6
Q ss_pred cEeEEEeCCCCCccccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEe
Q 012745 50 RVTKLVLEHLNLTGTLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVL 128 (457)
Q Consensus 50 ~l~~L~L~~n~l~~~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 128 (457)
.++.+.+..+ .++...|....+|+.+.+.++ ++.+.. .|.++.+|+.++|.++ ++.+-...|.++.+|+.++|
T Consensus 277 ~l~~~~~~~~----~i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~l 350 (394)
T 4fs7_A 277 GLKKVIYGSV----IVPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINF 350 (394)
T ss_dssp TCCEEEECSS----EECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECC
T ss_pred ccceeccCce----eeccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEE
Confidence 4555555543 355668899999999999766 666666 8999999999999755 77666788999999999999
Q ss_pred eccccCCCCcccccCCCccceeecccc
Q 012745 129 ANNQISGPIPESLSNLKRLYMLYLQDN 155 (457)
Q Consensus 129 s~N~l~~~~p~~~~~l~~L~~L~l~~N 155 (457)
..| ++.+-..+|.++++|+.+++..|
T Consensus 351 p~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 351 PLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred Ccc-ccEehHHHhhCCCCCCEEEECCC
Confidence 877 76566788999999999999766
No 418
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.25 E-value=0.00041 Score=56.78 Aligned_cols=35 Identities=26% Similarity=0.298 Sum_probs=15.1
Q ss_pred CCEEEeeccccCCCCcccccCCCccceeecccccc
Q 012745 123 LKIIVLANNQISGPIPESLSNLKRLYMLYLQDNKF 157 (457)
Q Consensus 123 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 157 (457)
|+.|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 44444444444433333344444444444444433
No 419
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.22 E-value=0.0004 Score=56.79 Aligned_cols=37 Identities=30% Similarity=0.393 Sum_probs=21.3
Q ss_pred CCcEEEccCCccccCCCccCCCCCCCCEEEeeccccC
Q 012745 98 NLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLANNQIS 134 (457)
Q Consensus 98 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 134 (457)
+|+.|+|++|+|+.+.+..|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 3555555555555444455556666666666666553
No 420
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.19 E-value=6e-05 Score=66.20 Aligned_cols=85 Identities=11% Similarity=0.121 Sum_probs=53.4
Q ss_pred cCCCcEeEEEeCCC-CCcc----ccChhhhcCCCCCCEEEeecCcccccCC-C----CcCCCCCcEEEccCCccccC---
Q 012745 46 CLNGRVTKLVLEHL-NLTG----TLDEKVINQLDQLRVLSFKGNSISGQIP-N----LLGLVNLKSLYLNDNNFSGK--- 112 (457)
Q Consensus 46 c~~~~l~~L~L~~n-~l~~----~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~----~~~l~~L~~L~Ls~N~l~~~--- 112 (457)
..++.|++|+|++| +|.. .+ .+.+..-+.|+.|+|++|.|...-. . +..-+.|+.|+|++|.|+..
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~l-a~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSL-IEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHH-HHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHH-HHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 44567888888885 6652 12 1355666778888888888874332 2 22346788888888887732
Q ss_pred -CCccCCCCCCCCEEEeecc
Q 012745 113 -FPGSLSSLHRLKIIVLANN 131 (457)
Q Consensus 113 -~p~~~~~l~~L~~L~Ls~N 131 (457)
+-+.+..-..|+.|+|++|
T Consensus 117 ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHhhCCceeEEECCCC
Confidence 2234445556777777654
No 421
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=97.09 E-value=0.0011 Score=60.53 Aligned_cols=73 Identities=12% Similarity=0.113 Sum_probs=56.6
Q ss_pred ccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCC--CCcceeeeecCCceEEEEEecCCCchH
Q 012745 344 GRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPN--LVPLRAYFQAKEERLLVYDYFPNGSLF 419 (457)
Q Consensus 344 g~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~~~~lv~ey~~~GsL~ 419 (457)
+.|..+.||++...+|..+++|..... ....+.+|++++..+.+.+ +.+++++....+..++||||++|.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~ 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence 355569999998777888999997654 2245778999998886545 456888877777789999999998884
No 422
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.99 E-value=5.7e-05 Score=66.33 Aligned_cols=112 Identities=8% Similarity=0.098 Sum_probs=75.8
Q ss_pred hhcCCCCCCEEEeecC-cccccC-----CCCcCCCCCcEEEccCCccccC----CCccCCCCCCCCEEEeeccccCCC--
Q 012745 69 VINQLDQLRVLSFKGN-SISGQI-----PNLLGLVNLKSLYLNDNNFSGK----FPGSLSSLHRLKIIVLANNQISGP-- 136 (457)
Q Consensus 69 ~~~~l~~L~~L~L~~N-~l~~~~-----~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~-- 136 (457)
.+.+-+.|+.|+|++| .|.... ..+..-..|+.|+|++|+|... +.+.+..-+.|+.|+|++|.|...
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 4566788999999986 776321 1355567899999999999843 233344567899999999999732
Q ss_pred --CcccccCCCccceeecccccc---cCC----CCCC--CCCCCcEEEeecCcce
Q 012745 137 --IPESLSNLKRLYMLYLQDNKF---TGP----IPPF--NQTNLRFFNVSNNDLS 180 (457)
Q Consensus 137 --~p~~~~~l~~L~~L~l~~N~l---~~~----~~~~--~~~~L~~L~l~~N~l~ 180 (457)
+-..+..-+.|+.|+|++|.. ... +... .-+.|+.|+++.|.+.
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 122455567799999987633 211 0001 3467888888877654
No 423
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=96.50 E-value=0.0061 Score=58.77 Aligned_cols=79 Identities=14% Similarity=0.306 Sum_probs=56.0
Q ss_pred cccccCCccEEEEEEecCCcEEEEEEcc--ccCc-ccHHHHHHHHHHHccCC--CCCCCcceeeeecC---CceEEEEEe
Q 012745 341 ETLGRGTIGSTYKAVLESGFIVTVKRLK--DARY-PRLEEFRRHMDILGRLR--HPNLVPLRAYFQAK---EERLLVYDY 412 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~--~~~~-~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~---~~~~lv~ey 412 (457)
+.++.|.++.||+.... +..+++|+.. .... .....+.+|..++..+. +..++++++++... +..|+||||
T Consensus 44 ~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 45788999999998876 4578888876 3321 22346788999999887 45678888888765 457999999
Q ss_pred cCCCchHH
Q 012745 413 FPNGSLFS 420 (457)
Q Consensus 413 ~~~GsL~~ 420 (457)
++|..+.+
T Consensus 123 v~G~~l~~ 130 (359)
T 3dxp_A 123 VSGRVLWD 130 (359)
T ss_dssp CCCBCCCC
T ss_pred cCCeecCC
Confidence 99887754
No 424
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=95.51 E-value=0.09 Score=48.02 Aligned_cols=103 Identities=12% Similarity=0.159 Sum_probs=68.7
Q ss_pred ccccCCcc-EEEEEEe-cCCcEEEEEEccccCcccHHHHHHHHHHHccCC-CCCCCcceeeeecCCceEEEEEecCCCch
Q 012745 342 TLGRGTIG-STYKAVL-ESGFIVTVKRLKDARYPRLEEFRRHMDILGRLR-HPNLVPLRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 342 ~lg~G~~g-~Vy~~~~-~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
.+..|..+ .||+... .++..+.+|+-... ...++.+|..+|+.+. +--+.++++++...+..++|||++++.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 34455554 6898774 44667888986543 3456888999988774 44466888999888889999999999888
Q ss_pred HHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcC
Q 012745 419 FSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMS 451 (457)
Q Consensus 419 ~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~ 451 (457)
.+...... ....-..+++.+.+..++...
T Consensus 108 ~~~~~~~~----~~~~~~~~~l~~~L~~Lh~~~ 136 (272)
T 4gkh_A 108 FQVLEEYP----DSGENIVDALAVFLRRLHSIP 136 (272)
T ss_dssp HHHHHHCG----GGHHHHHHHHHHHHHHHHTSC
T ss_pred cccccCCH----HHHHHHHHHHHHHHHHhcCCC
Confidence 87765432 111222333445556666543
No 425
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=94.50 E-value=0.063 Score=49.79 Aligned_cols=73 Identities=19% Similarity=0.207 Sum_probs=53.6
Q ss_pred cccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCCC---CCCCcceeeeecCCceEEEEEecCCCc
Q 012745 341 ETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRH---PNLVPLRAYFQAKEERLLVYDYFPNGS 417 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H---~niv~l~~~~~~~~~~~lv~ey~~~Gs 417 (457)
..+|.|..+.||+..+.+|+.|.||+-..........|..|.+.|+.+.- .-+++++++ +.-++||||++++.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeecccC
Confidence 45788999999999999999999998765543444568899998888742 233444443 23478999998764
No 426
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=93.94 E-value=0.13 Score=48.39 Aligned_cols=100 Identities=11% Similarity=0.095 Sum_probs=62.0
Q ss_pred cccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCCC----CCCCcceeeeecCCceEEEEEecCCC
Q 012745 341 ETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRH----PNLVPLRAYFQAKEERLLVYDYFPNG 416 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~~~~~~~~~~~lv~ey~~~G 416 (457)
+.++.|....||+. |..+++|..... .....+.+|.+++..+.+ ..+.+++++ +..++||||++|.
T Consensus 43 ~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~ 112 (320)
T 3r70_A 43 RYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGE 112 (320)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCB
T ss_pred EeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCc
Confidence 46788999999987 667888876432 223558899998888865 123344443 5678999999998
Q ss_pred chHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcCc
Q 012745 417 SLFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMSP 452 (457)
Q Consensus 417 sL~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~~ 452 (457)
++.+.....- .........+++.+++..++....
T Consensus 113 ~l~~~~~~~l--~~~~~~~~~~~l~~~La~LH~~~~ 146 (320)
T 3r70_A 113 RITYEQYHKL--SEKEKDALAYDEATFLKELHSIEI 146 (320)
T ss_dssp CCCHHHHTTS--CHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred cccccccccC--CHHHHHHHHHHHHHHHHHHhCCCc
Confidence 8874432211 111122333344555555555443
No 427
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=92.89 E-value=0.34 Score=45.28 Aligned_cols=75 Identities=15% Similarity=0.051 Sum_probs=53.7
Q ss_pred cccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCC---CCCcceeeee-cCCceEEEEEecCCC
Q 012745 341 ETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHP---NLVPLRAYFQ-AKEERLLVYDYFPNG 416 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~-~~~~~~lv~ey~~~G 416 (457)
..++.|....||+. |..+++|.-.. ......+.+|.++|..+.+. .+.+++.++. ..+..++||||++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 35677888889887 56678887432 12346788999999998753 2456666664 345678999999998
Q ss_pred chHHH
Q 012745 417 SLFSL 421 (457)
Q Consensus 417 sL~~~ 421 (457)
.+.+.
T Consensus 99 ~l~~~ 103 (306)
T 3tdw_A 99 ILGED 103 (306)
T ss_dssp ECHHH
T ss_pred ECchh
Confidence 88764
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=92.58 E-value=0.24 Score=46.57 Aligned_cols=73 Identities=18% Similarity=0.105 Sum_probs=57.1
Q ss_pred ccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCC---CCCCCcceeeeecCCceEEEEEecCCCch
Q 012745 342 TLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLR---HPNLVPLRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 342 ~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
.++.|.+..+|+.... +..+++|+.... ....|..|.+.|+.+. ...++++++++...+..++||||+++..+
T Consensus 43 ~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 43 KLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN 118 (312)
T ss_dssp EECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred EeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence 4678888999998764 667888887643 3566889998888874 35677888888777888999999998754
No 429
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=92.09 E-value=0.48 Score=45.50 Aligned_cols=99 Identities=9% Similarity=0.007 Sum_probs=65.4
Q ss_pred cccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCC--CCcceeeeecC-CceEEEEEecCCCc
Q 012745 341 ETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPN--LVPLRAYFQAK-EERLLVYDYFPNGS 417 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~-~~~~lv~ey~~~Gs 417 (457)
+.++.|....+|+... +|..+++|..... ..+..|..++..+.... +.++++++... +..|+||||++|..
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~ 120 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVT 120 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEE
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCC
Confidence 3577888899998875 4788889987542 25888988888886543 45677776654 56799999999877
Q ss_pred hHHHhhhCCCCCCchhhHHHHHHHHHHHHHHhcCc
Q 012745 418 LFSLIHGTCCLATRPLFIFLFSFFRLIKKVFQMSP 452 (457)
Q Consensus 418 L~~~l~~~~~~~~~~l~~~~r~~~~i~~~v~~~~~ 452 (457)
+.+.-.. ...-..+.+.+++..++...+
T Consensus 121 l~~l~~~-------~~~~~~~~lg~~La~LH~~~~ 148 (362)
T 3ovc_A 121 LQDLPET-------ELPAVLQPVAEAMDAIAAADL 148 (362)
T ss_dssp TTTSCGG-------GSGGGHHHHHHHHHHHHHCCC
T ss_pred cccCCHH-------HHHHHHHHHHHHHHHHhcCCC
Confidence 6532110 111122334567777776643
No 430
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=91.33 E-value=0.21 Score=48.53 Aligned_cols=75 Identities=15% Similarity=0.156 Sum_probs=48.7
Q ss_pred cccccCCccEEEEEEec-CCcEEEEEEccccCc-------ccHHHHHHHHHHHccCCC--CCCC-cceeeeecCCceEEE
Q 012745 341 ETLGRGTIGSTYKAVLE-SGFIVTVKRLKDARY-------PRLEEFRRHMDILGRLRH--PNLV-PLRAYFQAKEERLLV 409 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~~~-~g~~vavK~l~~~~~-------~~~~~~~~E~~~l~~l~H--~niv-~l~~~~~~~~~~~lv 409 (457)
+.+|.|.++.||++... +++.++||....... ...+.+..|.+++..+.. +..+ +++.+ ..+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 46899999999999753 468899998653211 123456778888887642 3334 44433 34556899
Q ss_pred EEecCCCc
Q 012745 410 YDYFPNGS 417 (457)
Q Consensus 410 ~ey~~~Gs 417 (457)
|||+++..
T Consensus 114 mE~l~g~~ 121 (397)
T 2olc_A 114 MEDLSHLK 121 (397)
T ss_dssp ECCCTTSE
T ss_pred EEeCCCcc
Confidence 99998643
No 431
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=90.57 E-value=0.22 Score=47.50 Aligned_cols=80 Identities=8% Similarity=0.009 Sum_probs=55.2
Q ss_pred cc-ccCCccEEEEEEec-------CCcEEEEEEccccC---cccHHHHHHHHHHHccCC-C--CCCCcceeeeecC---C
Q 012745 342 TL-GRGTIGSTYKAVLE-------SGFIVTVKRLKDAR---YPRLEEFRRHMDILGRLR-H--PNLVPLRAYFQAK---E 404 (457)
Q Consensus 342 ~l-g~G~~g~Vy~~~~~-------~g~~vavK~l~~~~---~~~~~~~~~E~~~l~~l~-H--~niv~l~~~~~~~---~ 404 (457)
.| +.|....+|+.... ++..+++|...... ......+.+|..++..+. + ..+.++++++... +
T Consensus 27 ~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g 106 (357)
T 3ats_A 27 GVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLG 106 (357)
T ss_dssp EECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTS
T ss_pred ECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccC
Confidence 46 77888999988754 26678888875432 111245778888888774 2 3566788777654 3
Q ss_pred ceEEEEEecCCCchHHH
Q 012745 405 ERLLVYDYFPNGSLFSL 421 (457)
Q Consensus 405 ~~~lv~ey~~~GsL~~~ 421 (457)
..|+||||++|..+.+.
T Consensus 107 ~~~~v~e~l~G~~l~~~ 123 (357)
T 3ats_A 107 TPFFLMDYVEGVVPPDV 123 (357)
T ss_dssp SCEEEEECCCCBCCCBT
T ss_pred CceEEEEecCCCChhhc
Confidence 56899999998777654
No 432
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=90.42 E-value=0.44 Score=44.28 Aligned_cols=77 Identities=16% Similarity=0.083 Sum_probs=51.2
Q ss_pred cccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCC-CCC--CCcceeeeecCC---ceEEEEEecC
Q 012745 341 ETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLR-HPN--LVPLRAYFQAKE---ERLLVYDYFP 414 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~-H~n--iv~l~~~~~~~~---~~~lv~ey~~ 414 (457)
+.++.|.+..||+.. ..+++|..... .....+.+|.+++..+. +.. +.+++......+ ..|+||||++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 357888888888753 45788886532 23467889999998873 333 334444433332 3489999999
Q ss_pred CCchHHHhh
Q 012745 415 NGSLFSLIH 423 (457)
Q Consensus 415 ~GsL~~~l~ 423 (457)
|.+|.+...
T Consensus 100 G~~l~~~~~ 108 (304)
T 3sg8_A 100 GVPLTPLLL 108 (304)
T ss_dssp CEECCHHHH
T ss_pred CeECCcccc
Confidence 988875433
No 433
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=84.58 E-value=0.12 Score=51.76 Aligned_cols=53 Identities=9% Similarity=0.058 Sum_probs=13.5
Q ss_pred ccEEEEEEecC-CcEEEE------EEccccCc--ccHHHHHHHHHHHccCCCCCCCcceeee
Q 012745 348 IGSTYKAVLES-GFIVTV------KRLKDARY--PRLEEFRRHMDILGRLRHPNLVPLRAYF 400 (457)
Q Consensus 348 ~g~Vy~~~~~~-g~~vav------K~l~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~ 400 (457)
||.||+|.+.. ..+||| |..+.... .....|.+|..++...+|+|+++.+++.
T Consensus 152 fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 152 YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 99999999653 467888 76654332 2345688999999999999999988865
No 434
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=80.59 E-value=2.8 Score=39.09 Aligned_cols=72 Identities=17% Similarity=0.215 Sum_probs=40.3
Q ss_pred ccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCC--CCCCCccee------eeecCCceEEEEEec
Q 012745 342 TLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLR--HPNLVPLRA------YFQAKEERLLVYDYF 413 (457)
Q Consensus 342 ~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~--H~niv~l~~------~~~~~~~~~lv~ey~ 413 (457)
.++.|..+.||+....+| .+++|+.... ......|..++..+. .-.+++++. +....+..+++|||+
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 355567889999887655 4889988752 233334455554442 112333332 112356678999999
Q ss_pred CCCch
Q 012745 414 PNGSL 418 (457)
Q Consensus 414 ~~GsL 418 (457)
+|..+
T Consensus 114 ~G~~~ 118 (346)
T 2q83_A 114 EGRPF 118 (346)
T ss_dssp CCBCC
T ss_pred cCccC
Confidence 98654
No 435
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=74.70 E-value=8.1 Score=29.19 Aligned_cols=42 Identities=19% Similarity=0.249 Sum_probs=21.0
Q ss_pred ccChhhhcCCCCCCEEEeecCcccccCC-CCcCCCCCcEEEccC
Q 012745 64 TLDEKVINQLDQLRVLSFKGNSISGQIP-NLLGLVNLKSLYLND 106 (457)
Q Consensus 64 ~l~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~l~~L~~L~Ls~ 106 (457)
.|....|.+..+|+.+.|-.+ ++.+.. .|.++.+|+.+.+..
T Consensus 10 ~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 10 GMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp SSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred EecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 444455555555555555543 232333 455555555555544
No 436
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=72.79 E-value=6.8 Score=36.33 Aligned_cols=74 Identities=12% Similarity=0.067 Sum_probs=47.5
Q ss_pred cccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCC--CCCcceee-----eecCCceEEEEEecCC
Q 012745 343 LGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHP--NLVPLRAY-----FQAKEERLLVYDYFPN 415 (457)
Q Consensus 343 lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~--niv~l~~~-----~~~~~~~~lv~ey~~~ 415 (457)
++ |....||+....+|+.+++|...... .....+..|..++..+... .+++++.. ....+..+++|||++|
T Consensus 34 l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G 111 (328)
T 1zyl_A 34 LN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 111 (328)
T ss_dssp EC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred ec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence 44 66678998877677789999987432 2345666788777766422 24444443 1123456789999997
Q ss_pred Cch
Q 012745 416 GSL 418 (457)
Q Consensus 416 GsL 418 (457)
..+
T Consensus 112 ~~~ 114 (328)
T 1zyl_A 112 RQF 114 (328)
T ss_dssp EEC
T ss_pred CCC
Confidence 543
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=71.97 E-value=7.4 Score=38.05 Aligned_cols=71 Identities=15% Similarity=0.158 Sum_probs=47.7
Q ss_pred ccccCCccEEEEEEecC--------CcEEEEEEccccCcccHHHHHHHHHHHccCCCCCC-CcceeeeecCCceEEEEEe
Q 012745 342 TLGRGTIGSTYKAVLES--------GFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNL-VPLRAYFQAKEERLLVYDY 412 (457)
Q Consensus 342 ~lg~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~ey 412 (457)
.|+.|....+|++...+ +..+.+|+..... ....+..|..++..+...++ +++++.+.. .+||||
T Consensus 80 ~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~ 153 (429)
T 1nw1_A 80 RIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEY 153 (429)
T ss_dssp EECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECC
T ss_pred EeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEE
Confidence 45677778999998653 4788899884321 12556689988888754444 456665432 389999
Q ss_pred cCCCch
Q 012745 413 FPNGSL 418 (457)
Q Consensus 413 ~~~GsL 418 (457)
++|.+|
T Consensus 154 l~G~~l 159 (429)
T 1nw1_A 154 IPSRPL 159 (429)
T ss_dssp CCEEEC
T ss_pred eCCccc
Confidence 986454
No 438
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=70.49 E-value=14 Score=35.50 Aligned_cols=73 Identities=14% Similarity=0.150 Sum_probs=44.4
Q ss_pred ccccCCccEEEEEEec--------CCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCC-CcceeeeecCCceEEEEEe
Q 012745 342 TLGRGTIGSTYKAVLE--------SGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNL-VPLRAYFQAKEERLLVYDY 412 (457)
Q Consensus 342 ~lg~G~~g~Vy~~~~~--------~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~ey 412 (457)
.+..|-...+|+.... ++..+.+|+.... ......+.+|.++++.+.-..+ .++++++.. .+||||
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~ 131 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQY 131 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEEC
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEE
Confidence 3555666788998864 2468889986332 2345667789999988753333 456665543 289999
Q ss_pred cCCCchH
Q 012745 413 FPNGSLF 419 (457)
Q Consensus 413 ~~~GsL~ 419 (457)
++|..|.
T Consensus 132 i~G~~l~ 138 (379)
T 3feg_A 132 IPSRPLK 138 (379)
T ss_dssp CSEEECC
T ss_pred ecCccCC
Confidence 9976553
No 439
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=68.68 E-value=17 Score=35.19 Aligned_cols=79 Identities=14% Similarity=0.093 Sum_probs=46.8
Q ss_pred cccccCCccEEEEEEecCCcEEEEEEccccC-------c--ccHHHHHHHHHHHc-cCCCCCCCcceeeeecCCceEEEE
Q 012745 341 ETLGRGTIGSTYKAVLESGFIVTVKRLKDAR-------Y--PRLEEFRRHMDILG-RLRHPNLVPLRAYFQAKEERLLVY 410 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~-------~--~~~~~~~~E~~~l~-~l~H~niv~l~~~~~~~~~~~lv~ 410 (457)
+.+|.|....||++.. ++..++||...... . .....+..|+..+. ...+..+.+++.+. .+..++||
T Consensus 40 ~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv~ 116 (420)
T 2pyw_A 40 KEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIGM 116 (420)
T ss_dssp EECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEEE
T ss_pred EEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEEE
Confidence 3578899999999864 46789999432110 0 12334444443332 22234566666654 56679999
Q ss_pred Eec-CCC-chHHHh
Q 012745 411 DYF-PNG-SLFSLI 422 (457)
Q Consensus 411 ey~-~~G-sL~~~l 422 (457)
||+ +++ .+.+.+
T Consensus 117 e~l~~g~~~l~~~l 130 (420)
T 2pyw_A 117 RYLEPPHIILRKGL 130 (420)
T ss_dssp CCCCTTCEEHHHHH
T ss_pred eecCCcchhHHHHH
Confidence 999 863 343443
No 440
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=66.94 E-value=39 Score=31.11 Aligned_cols=78 Identities=13% Similarity=0.106 Sum_probs=41.9
Q ss_pred cccCCccE-EEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCCC--CCCCcceeeeecCCceEEEEEecCCCchH
Q 012745 343 LGRGTIGS-TYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRH--PNLVPLRAYFQAKEERLLVYDYFPNGSLF 419 (457)
Q Consensus 343 lg~G~~g~-Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~lv~ey~~~GsL~ 419 (457)
++.|.... +|+....+|..+.+|....... ..+..|+.++..+.. -.+.+++.+.... -+++||++.+..+.
T Consensus 26 l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~~~l~ 100 (333)
T 3csv_A 26 LAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGDALFT 100 (333)
T ss_dssp --------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCSCBHH
T ss_pred CCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCCcchH
Confidence 44443333 5666654466777776544321 223455666655532 2345666654333 37899999888888
Q ss_pred HHhhhC
Q 012745 420 SLIHGT 425 (457)
Q Consensus 420 ~~l~~~ 425 (457)
+++...
T Consensus 101 ~~l~~~ 106 (333)
T 3csv_A 101 EVINND 106 (333)
T ss_dssp HHHHHC
T ss_pred HHhcCC
Confidence 887653
No 441
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=63.56 E-value=18 Score=27.27 Aligned_cols=45 Identities=16% Similarity=0.267 Sum_probs=24.3
Q ss_pred cccccCC-CCcCCCCCcEEEccCCccccCCCccCCCCCCCCEEEeec
Q 012745 85 SISGQIP-NLLGLVNLKSLYLNDNNFSGKFPGSLSSLHRLKIIVLAN 130 (457)
Q Consensus 85 ~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 130 (457)
.++.+.. .|.++.+|+.+.|..+ ++.+-...|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 3443444 5666666666666544 3334445566666666665544
No 442
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=52.58 E-value=14 Score=33.67 Aligned_cols=71 Identities=6% Similarity=-0.053 Sum_probs=41.9
Q ss_pred cccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCCC-CcceeeeecCCceEEEEEec-CCCch
Q 012745 341 ETLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNL-VPLRAYFQAKEERLLVYDYF-PNGSL 418 (457)
Q Consensus 341 ~~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~ey~-~~GsL 418 (457)
+.++.|....+|+. ..+.+|+....... .....+|..++..+....+ .+++++ ..+.-++++||+ ++-++
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence 45777888899988 45777877643211 1123467777776643333 355544 333457899999 65444
Q ss_pred H
Q 012745 419 F 419 (457)
Q Consensus 419 ~ 419 (457)
.
T Consensus 96 ~ 96 (301)
T 3dxq_A 96 S 96 (301)
T ss_dssp C
T ss_pred C
Confidence 3
No 443
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=47.76 E-value=16 Score=33.61 Aligned_cols=74 Identities=5% Similarity=0.010 Sum_probs=41.5
Q ss_pred ccccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCCCCC--CCcceee------eecCCceEEEEEec
Q 012745 342 TLGRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPN--LVPLRAY------FQAKEERLLVYDYF 413 (457)
Q Consensus 342 ~lg~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~------~~~~~~~~lv~ey~ 413 (457)
.++.|....+|+....+| .+++|...... ....+..|..++..+.... +.+++.. ....+..+++|+|+
T Consensus 29 ~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l 105 (322)
T 2ppq_A 29 GIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFL 105 (322)
T ss_dssp EECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECC
T ss_pred ccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeC
Confidence 355677788998886655 57788887531 1234556777766653222 3333321 11235568999999
Q ss_pred CCCch
Q 012745 414 PNGSL 418 (457)
Q Consensus 414 ~~GsL 418 (457)
+|..+
T Consensus 106 ~G~~~ 110 (322)
T 2ppq_A 106 EGMWL 110 (322)
T ss_dssp CCBCC
T ss_pred CCcCC
Confidence 97653
No 444
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=45.68 E-value=47 Score=32.61 Aligned_cols=72 Identities=13% Similarity=0.092 Sum_probs=45.3
Q ss_pred ccccCCccEEEEEEecC-CcEEEEEEccccCcccHHHHHHHHHHHccCCCCCCC-cceeeeecCCceEEEEEecCCCch
Q 012745 342 TLGRGTIGSTYKAVLES-GFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNLV-PLRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 342 ~lg~G~~g~Vy~~~~~~-g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
.|+.|-...+|+....+ +..+.+|+...... ..-+..+|..++..+...+++ ++++++. + .+||||++|-+|
T Consensus 115 ~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 115 IINGGITNILIKVKDMSKQAKYLIRLYGPKTD-EIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EECC--CEEEEEEEETTTTEEEEEEEECC-CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EcCCCeEeEEEEEEECCCCceEEEEECCCChh-hhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 46667778999988764 47788888754321 111125788888888655554 5666652 2 359999997554
No 445
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=44.03 E-value=30 Score=32.52 Aligned_cols=72 Identities=10% Similarity=0.086 Sum_probs=42.3
Q ss_pred ccccCCccEEEEEEecC---------CcEEEEEEccccCcccHHHHHHHHHHHccCCCCCC-CcceeeeecCCceEEEEE
Q 012745 342 TLGRGTIGSTYKAVLES---------GFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNL-VPLRAYFQAKEERLLVYD 411 (457)
Q Consensus 342 ~lg~G~~g~Vy~~~~~~---------g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~e 411 (457)
.++.|....+|+....+ +..+.+|+...... ...+...|.+++..+....+ .++++.. . -++|||
T Consensus 40 ~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~e 114 (369)
T 3c5i_A 40 QILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIEE 114 (369)
T ss_dssp EC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEEE
Confidence 46667778899988643 26788888754321 11123567777777753343 4566543 2 378999
Q ss_pred ecCCCch
Q 012745 412 YFPNGSL 418 (457)
Q Consensus 412 y~~~GsL 418 (457)
|++|..+
T Consensus 115 ~i~G~~l 121 (369)
T 3c5i_A 115 WLYGDPL 121 (369)
T ss_dssp CCCSEEC
T ss_pred EecCCcC
Confidence 9997544
No 446
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=37.14 E-value=5 Score=27.46 Aligned_cols=20 Identities=30% Similarity=0.590 Sum_probs=8.3
Q ss_pred EehhHHHHHHHHHhheeeeE
Q 012745 243 SVGGGLALLLLICIVLYVCL 262 (457)
Q Consensus 243 ~v~~~~~l~~~~~~~~~~~~ 262 (457)
++|+++++++++.+.++++.
T Consensus 13 vlGg~~~lll~~glcI~ccv 32 (70)
T 2klu_A 13 VLGGVAGLLLFIGLGIFFSV 32 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHhh
Confidence 34444444434333333333
No 447
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=35.85 E-value=1.4e+02 Score=27.45 Aligned_cols=68 Identities=18% Similarity=0.116 Sum_probs=41.9
Q ss_pred ccCCccEEEEEEecCCcEEEEEEccccCcccHHHHHHHHHHHccCC---CCCCCcceee------eecCCceEEEEEecC
Q 012745 344 GRGTIGSTYKAVLESGFIVTVKRLKDARYPRLEEFRRHMDILGRLR---HPNLVPLRAY------FQAKEERLLVYDYFP 414 (457)
Q Consensus 344 g~G~~g~Vy~~~~~~g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~------~~~~~~~~lv~ey~~ 414 (457)
|.|....||+....+| .+++|+...... ..|..++..+. -+.+++++.. ....+..+++|+|++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 3344678999987767 889998765432 24444444442 1224444432 223466789999999
Q ss_pred CCch
Q 012745 415 NGSL 418 (457)
Q Consensus 415 ~GsL 418 (457)
|..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8765
No 448
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=31.86 E-value=1.2e+02 Score=29.41 Aligned_cols=72 Identities=10% Similarity=0.128 Sum_probs=44.6
Q ss_pred ccccCCccEEEEEEecC--------CcEEEEEEccccCcccHHHHHHHHHHHccCCCCCC-CcceeeeecCCceEEEEEe
Q 012745 342 TLGRGTIGSTYKAVLES--------GFIVTVKRLKDARYPRLEEFRRHMDILGRLRHPNL-VPLRAYFQAKEERLLVYDY 412 (457)
Q Consensus 342 ~lg~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~ey 412 (457)
.+..|-...+|+....+ +..+.+|+..... ...-+..+|..++..+....+ .++++.+ . -++||||
T Consensus 77 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~ef 151 (424)
T 3mes_A 77 QIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEEF 151 (424)
T ss_dssp EECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEEC
T ss_pred EcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEEE
Confidence 35556678889988653 5778888865432 111123577777777753334 4555533 2 2789999
Q ss_pred cCCCch
Q 012745 413 FPNGSL 418 (457)
Q Consensus 413 ~~~GsL 418 (457)
++|..|
T Consensus 152 I~G~~l 157 (424)
T 3mes_A 152 IDGEPL 157 (424)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 997554
No 449
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=28.78 E-value=1.5e+02 Score=28.28 Aligned_cols=72 Identities=13% Similarity=0.092 Sum_probs=42.2
Q ss_pred cccCCccEEEEEEecC--------CcEEEEEEccccCc-----------ccH-------HHHHHHHHHHccCCCCC-CCc
Q 012745 343 LGRGTIGSTYKAVLES--------GFIVTVKRLKDARY-----------PRL-------EEFRRHMDILGRLRHPN-LVP 395 (457)
Q Consensus 343 lg~G~~g~Vy~~~~~~--------g~~vavK~l~~~~~-----------~~~-------~~~~~E~~~l~~l~H~n-iv~ 395 (457)
+..|-...+|++..++ +..|.++..-.... .++ +....|..++..+...+ ..+
T Consensus 60 l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~Pk 139 (401)
T 3f2s_A 60 IRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGPK 139 (401)
T ss_dssp EECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSSCC
T ss_pred cCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCCCe
Confidence 4445567888887653 35777887643211 111 12335888888875444 446
Q ss_pred ceeeeecCCceEEEEEecCCCch
Q 012745 396 LRAYFQAKEERLLVYDYFPNGSL 418 (457)
Q Consensus 396 l~~~~~~~~~~~lv~ey~~~GsL 418 (457)
+++++.. .+|+||+++-+|
T Consensus 140 l~~~~~~----G~i~efI~G~~L 158 (401)
T 3f2s_A 140 LYGIFPQ----GRLEQFIPSRRL 158 (401)
T ss_dssp EEEEETT----EEEEECCCEEEC
T ss_pred EEEEeCC----CeEEEecCCccC
Confidence 7766532 289999996544
Done!