Query 012755
Match_columns 457
No_of_seqs 339 out of 2932
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 15:36:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012755.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012755hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ii7_A Kelch-like protein 7; p 100.0 3.1E-42 1.1E-46 333.5 34.1 267 160-451 11-290 (306)
2 1zgk_A Kelch-like ECH-associat 100.0 1.1E-41 3.7E-46 330.3 35.3 268 159-453 23-307 (308)
3 2xn4_A Kelch-like protein 2; s 100.0 9E-42 3.1E-46 329.6 34.6 269 160-454 15-298 (302)
4 2vpj_A Kelch-like protein 12; 100.0 7E-41 2.4E-45 323.1 34.4 268 159-453 13-298 (301)
5 4asc_A Kelch repeat and BTB do 100.0 5E-41 1.7E-45 326.6 28.2 258 160-443 4-287 (315)
6 2woz_A Kelch repeat and BTB do 100.0 2.9E-40 1E-44 321.6 29.1 254 160-439 15-293 (318)
7 2uvk_A YJHT; unknown function, 100.0 2.8E-38 9.5E-43 312.5 27.9 263 160-444 19-353 (357)
8 2xn4_A Kelch-like protein 2; s 100.0 3.3E-36 1.1E-40 290.6 29.8 250 133-405 35-302 (302)
9 4asc_A Kelch repeat and BTB do 100.0 5.4E-37 1.9E-41 298.1 23.5 256 132-411 17-306 (315)
10 1zgk_A Kelch-like ECH-associat 100.0 8.2E-36 2.8E-40 288.9 30.2 242 129-389 40-301 (308)
11 3ii7_A Kelch-like protein 7; p 100.0 8.1E-36 2.8E-40 288.4 29.0 224 205-451 11-243 (306)
12 2woz_A Kelch repeat and BTB do 100.0 5.1E-36 1.7E-40 291.6 25.6 253 133-409 29-314 (318)
13 2uvk_A YJHT; unknown function, 100.0 1.4E-35 4.9E-40 293.0 28.5 243 184-448 2-309 (357)
14 2vpj_A Kelch-like protein 12; 100.0 3.1E-34 1.1E-38 276.5 29.0 225 203-450 12-248 (301)
15 2zwa_A Leucine carboxyl methyl 100.0 8.6E-32 2.9E-36 288.2 24.1 218 201-441 393-643 (695)
16 2zwa_A Leucine carboxyl methyl 100.0 1.8E-31 6.1E-36 285.7 24.0 236 159-412 396-675 (695)
17 1k3i_A Galactose oxidase precu 100.0 5.1E-31 1.7E-35 281.3 16.9 295 136-449 174-513 (656)
18 1k3i_A Galactose oxidase precu 100.0 9.6E-29 3.3E-33 263.6 16.5 271 158-453 157-463 (656)
19 2ovr_B FBW7, F-BOX/WD repeat p 99.0 6.8E-08 2.3E-12 97.0 24.2 275 106-429 15-349 (445)
20 1p22_A F-BOX/WD-repeat protein 98.9 8.3E-08 2.8E-12 96.2 18.2 276 106-428 7-365 (435)
21 3v7d_B Cell division control p 98.8 1.8E-07 6.2E-12 94.2 19.3 278 106-429 11-382 (464)
22 1fs1_A SKP2 F-BOX, cyclin A/CD 98.4 6.3E-08 2.2E-12 66.7 1.2 45 107-151 6-50 (53)
23 3dsm_A Uncharacterized protein 98.3 0.00014 4.8E-09 69.8 24.0 235 160-427 53-301 (328)
24 3q7m_A Lipoprotein YFGL, BAMB; 98.3 0.001 3.5E-08 64.7 28.6 223 159-438 102-344 (376)
25 3q7m_A Lipoprotein YFGL, BAMB; 98.3 0.0012 4.1E-08 64.1 28.8 237 159-438 52-303 (376)
26 3dsm_A Uncharacterized protein 98.2 0.00054 1.9E-08 65.6 25.7 222 169-429 16-254 (328)
27 3mbr_X Glutamine cyclotransfer 98.2 0.00017 5.8E-09 65.9 19.6 186 201-411 26-224 (243)
28 3nol_A Glutamine cyclotransfer 98.0 0.00078 2.7E-08 62.1 20.0 187 202-411 49-245 (262)
29 2e31_A FBS1, F-box only protei 97.9 1.6E-06 5.5E-11 81.4 0.6 46 107-152 48-94 (297)
30 3mbr_X Glutamine cyclotransfer 97.8 0.0019 6.5E-08 58.9 19.3 164 242-440 23-189 (243)
31 1q7f_A NHL, brain tumor CG1071 97.7 0.034 1.2E-06 51.2 27.0 232 160-428 40-280 (286)
32 1rwi_B Serine/threonine-protei 97.6 0.0083 2.8E-07 54.8 21.0 224 160-428 34-264 (270)
33 3nol_A Glutamine cyclotransfer 97.6 0.0026 8.8E-08 58.6 16.8 156 243-429 46-202 (262)
34 2iwa_A Glutamine cyclotransfer 97.6 0.0091 3.1E-07 55.3 20.1 185 205-412 31-227 (266)
35 2z2n_A Virginiamycin B lyase; 97.5 0.03 1E-06 51.5 23.3 223 160-429 67-296 (299)
36 3nok_A Glutaminyl cyclase; bet 97.5 0.0052 1.8E-07 56.6 16.9 185 201-411 60-255 (268)
37 2z2n_A Virginiamycin B lyase; 97.5 0.04 1.4E-06 50.6 23.8 224 160-427 25-254 (299)
38 3vgz_A Uncharacterized protein 97.4 0.059 2E-06 50.8 24.9 230 160-429 52-304 (353)
39 4ery_A WD repeat-containing pr 97.4 0.055 1.9E-06 50.4 24.1 226 161-429 36-269 (312)
40 3jrp_A Fusion protein of prote 97.4 0.005 1.7E-07 58.9 16.4 238 161-441 24-296 (379)
41 2qc5_A Streptogramin B lactona 97.4 0.055 1.9E-06 49.7 22.9 222 160-427 30-259 (300)
42 1l0q_A Surface layer protein; 97.3 0.0075 2.6E-07 58.4 16.3 185 162-381 3-195 (391)
43 3vgz_A Uncharacterized protein 97.2 0.06 2E-06 50.8 22.1 194 205-429 52-263 (353)
44 3hfq_A Uncharacterized protein 97.2 0.0022 7.5E-08 61.3 11.9 187 172-382 20-227 (347)
45 3no2_A Uncharacterized protein 97.2 0.034 1.2E-06 51.6 19.5 248 161-453 5-273 (276)
46 2ovr_B FBW7, F-BOX/WD repeat p 97.2 0.08 2.7E-06 52.2 23.4 231 161-429 210-443 (445)
47 2qc5_A Streptogramin B lactona 97.2 0.1 3.5E-06 47.9 22.7 220 160-427 72-299 (300)
48 1kb0_A Quinohemoprotein alcoho 97.1 0.14 5E-06 53.9 25.7 118 202-330 74-208 (677)
49 1l0q_A Surface layer protein; 97.1 0.0087 3E-07 57.9 14.8 182 207-429 3-190 (391)
50 1ri6_A Putative isomerase YBHE 97.1 0.076 2.6E-06 49.7 21.1 243 161-440 50-317 (343)
51 1pjx_A Dfpase, DIISOPROPYLFLUO 97.1 0.047 1.6E-06 50.8 19.4 235 160-429 28-300 (314)
52 2ad6_A Methanol dehydrogenase 97.1 0.13 4.3E-06 53.2 24.1 118 202-329 59-193 (571)
53 1gxr_A ESG1, transducin-like e 97.0 0.024 8.3E-07 53.0 17.1 184 205-429 108-297 (337)
54 2iwa_A Glutamine cyclotransfer 97.0 0.064 2.2E-06 49.5 18.9 155 243-429 24-182 (266)
55 3nok_A Glutaminyl cyclase; bet 97.0 0.026 8.8E-07 52.0 16.0 151 243-429 58-211 (268)
56 1w6s_A Methanol dehydrogenase 97.0 0.14 4.6E-06 53.3 23.2 119 202-330 59-200 (599)
57 3jrp_A Fusion protein of prote 96.9 0.067 2.3E-06 50.8 19.4 191 205-429 22-241 (379)
58 3v9f_A Two-component system se 96.9 0.096 3.3E-06 56.1 22.3 189 161-382 418-618 (781)
59 1p22_A F-BOX/WD-repeat protein 96.9 0.073 2.5E-06 52.4 19.9 187 202-429 139-326 (435)
60 3bws_A Protein LP49; two-domai 96.9 0.037 1.3E-06 54.2 17.6 216 171-428 102-334 (433)
61 3no2_A Uncharacterized protein 96.9 0.096 3.3E-06 48.5 19.5 191 205-439 4-203 (276)
62 1got_B GT-beta; complex (GTP-b 96.9 0.13 4.4E-06 48.8 20.9 223 162-428 69-301 (340)
63 1kb0_A Quinohemoprotein alcoho 96.9 0.61 2.1E-05 49.1 33.1 213 159-380 76-353 (677)
64 3bws_A Protein LP49; two-domai 96.9 0.06 2.1E-06 52.6 18.8 150 208-380 91-248 (433)
65 2ad6_A Methanol dehydrogenase 96.9 0.54 1.9E-05 48.4 28.8 213 159-380 61-342 (571)
66 2hqs_A Protein TOLB; TOLB, PAL 96.8 0.07 2.4E-06 52.5 19.0 221 170-429 159-388 (415)
67 1rwi_B Serine/threonine-protei 96.8 0.12 4.2E-06 46.7 19.3 185 205-429 34-223 (270)
68 1q7f_A NHL, brain tumor CG1071 96.8 0.25 8.6E-06 45.2 21.6 190 205-428 40-238 (286)
69 1nir_A Nitrite reductase; hemo 96.8 0.14 4.9E-06 52.4 21.3 291 111-441 95-415 (543)
70 3v7d_B Cell division control p 96.7 0.5 1.7E-05 46.5 25.1 143 249-429 279-422 (464)
71 4g56_B MGC81050 protein; prote 96.7 0.032 1.1E-06 53.7 15.3 228 160-429 105-344 (357)
72 2p4o_A Hypothetical protein; p 96.7 0.32 1.1E-05 45.4 21.9 192 161-382 43-248 (306)
73 3jro_A Fusion protein of prote 96.7 0.032 1.1E-06 59.6 16.4 240 161-441 22-294 (753)
74 1yiq_A Quinohemoprotein alcoho 96.7 0.84 2.9E-05 48.1 27.0 117 202-329 67-200 (689)
75 4a2l_A BT_4663, two-component 96.6 0.13 4.4E-06 55.2 20.8 187 163-382 420-621 (795)
76 3v9f_A Two-component system se 96.6 0.18 6.1E-06 54.0 21.5 225 160-429 373-612 (781)
77 3u4y_A Uncharacterized protein 96.6 0.058 2E-06 50.6 15.8 230 160-428 51-304 (331)
78 3ow8_A WD repeat-containing pr 96.6 0.36 1.2E-05 45.4 21.3 184 205-429 91-280 (321)
79 1k8k_C P40, ARP2/3 complex 41 96.6 0.37 1.3E-05 45.5 21.5 196 161-384 65-285 (372)
80 1vyh_C Platelet-activating fac 96.5 0.19 6.5E-06 49.2 19.7 233 161-429 121-370 (410)
81 3g4e_A Regucalcin; six bladed 96.5 0.061 2.1E-06 50.1 15.3 190 205-429 24-230 (297)
82 2ojh_A Uncharacterized protein 96.5 0.067 2.3E-06 48.6 15.2 188 167-383 59-266 (297)
83 4gqb_B Methylosome protein 50; 96.5 0.082 2.8E-06 50.6 16.2 227 161-429 94-332 (344)
84 1flg_A Protein (quinoprotein e 96.5 0.49 1.7E-05 48.8 23.0 116 202-328 65-200 (582)
85 1gxr_A ESG1, transducin-like e 96.5 0.14 4.6E-06 47.7 17.4 220 161-425 110-334 (337)
86 1k8k_C P40, ARP2/3 complex 41 96.5 0.37 1.3E-05 45.5 20.8 230 161-428 21-274 (372)
87 1kv9_A Type II quinohemoprotei 96.4 1.1 3.9E-05 46.9 26.4 117 202-329 63-195 (668)
88 3g4e_A Regucalcin; six bladed 96.4 0.17 5.8E-06 47.0 17.8 220 160-412 24-263 (297)
89 3mkq_A Coatomer beta'-subunit; 96.4 0.25 8.5E-06 52.7 21.3 225 160-428 25-259 (814)
90 4a2l_A BT_4663, two-component 96.4 1.1 3.9E-05 47.8 26.5 236 160-429 320-572 (795)
91 4aez_A CDC20, WD repeat-contai 96.4 0.3 1E-05 47.3 20.2 225 161-429 147-381 (401)
92 4aez_A CDC20, WD repeat-contai 96.4 0.33 1.1E-05 47.0 20.5 186 161-379 104-297 (401)
93 3ow8_A WD repeat-containing pr 96.4 0.27 9.1E-06 46.3 19.0 218 163-426 95-319 (321)
94 3u4y_A Uncharacterized protein 96.3 0.16 5.6E-06 47.4 17.2 230 160-429 9-253 (331)
95 1ri6_A Putative isomerase YBHE 96.3 0.3 1E-05 45.5 18.7 193 161-379 5-215 (343)
96 3jro_A Fusion protein of prote 96.3 0.073 2.5E-06 56.9 15.8 191 205-429 20-239 (753)
97 2ynn_A Coatomer subunit beta'; 96.2 0.57 2E-05 43.4 20.3 225 160-429 25-260 (304)
98 2ojh_A Uncharacterized protein 96.2 0.27 9.2E-06 44.4 17.7 224 170-429 22-259 (297)
99 3vl1_A 26S proteasome regulato 96.2 0.5 1.7E-05 45.6 20.6 189 204-429 107-323 (420)
100 1kv9_A Type II quinohemoprotei 96.2 1.5 5.2E-05 45.9 31.0 209 159-377 65-335 (668)
101 1got_B GT-beta; complex (GTP-b 96.2 0.39 1.3E-05 45.4 19.2 176 204-413 153-334 (340)
102 2pm7_B Protein transport prote 96.2 0.35 1.2E-05 44.7 18.5 198 206-441 67-294 (297)
103 2dg1_A DRP35, lactonase; beta 96.2 0.11 3.8E-06 48.8 15.1 155 204-375 54-213 (333)
104 3scy_A Hypothetical bacterial 96.2 0.14 4.9E-06 48.7 16.1 30 355-384 221-251 (361)
105 4ery_A WD repeat-containing pr 96.2 0.26 9E-06 45.7 17.5 185 205-428 34-223 (312)
106 2pbi_B Guanine nucleotide-bind 96.2 0.39 1.3E-05 45.8 19.1 228 161-429 77-316 (354)
107 2fp8_A Strictosidine synthase; 96.1 0.11 3.9E-06 48.9 14.9 196 160-376 91-314 (322)
108 1vyh_C Platelet-activating fac 96.1 0.72 2.5E-05 44.9 21.3 147 205-380 119-270 (410)
109 3fm0_A Protein CIAO1; WDR39,SG 96.1 0.099 3.4E-06 49.8 14.5 181 205-413 27-216 (345)
110 2hes_X YDR267CP; beta-propelle 96.1 0.36 1.2E-05 45.4 18.4 232 163-429 27-281 (330)
111 3vl1_A 26S proteasome regulato 96.1 1.1 3.7E-05 43.2 23.9 222 162-428 111-365 (420)
112 3hfq_A Uncharacterized protein 96.1 0.11 3.7E-06 49.2 14.6 150 219-382 19-179 (347)
113 3c5m_A Oligogalacturonate lyas 96.0 0.71 2.4E-05 44.0 20.4 149 217-383 167-337 (396)
114 3bg1_A Protein SEC13 homolog; 96.0 0.17 5.9E-06 47.4 15.5 203 206-449 71-310 (316)
115 3zwl_B Eukaryotic translation 96.0 0.77 2.6E-05 43.0 20.2 190 162-380 46-254 (369)
116 1yiq_A Quinohemoprotein alcoho 96.0 0.53 1.8E-05 49.7 20.5 114 246-381 67-200 (689)
117 3dwl_C Actin-related protein 2 95.9 0.068 2.3E-06 51.1 12.4 150 204-376 21-178 (377)
118 3k26_A Polycomb protein EED; W 95.9 0.86 2.9E-05 42.6 20.1 150 160-325 34-194 (366)
119 3l2o_B F-box only protein 4; s 95.9 0.00095 3.3E-08 62.0 -1.0 44 110-153 5-48 (312)
120 2dg1_A DRP35, lactonase; beta 95.9 0.52 1.8E-05 44.0 18.3 243 160-429 55-317 (333)
121 3fvz_A Peptidyl-glycine alpha- 95.9 1.2 4E-05 41.8 24.4 223 171-428 70-322 (329)
122 2aq5_A Coronin-1A; WD40 repeat 95.9 0.92 3.1E-05 43.7 20.5 193 205-429 93-300 (402)
123 2pm7_B Protein transport prote 95.8 0.9 3.1E-05 41.8 19.5 189 205-428 20-238 (297)
124 1sq9_A Antiviral protein SKI8; 95.8 0.98 3.3E-05 43.0 20.4 120 249-378 197-325 (397)
125 3azo_A Aminopeptidase; POP fam 95.8 1.1 3.6E-05 46.5 22.0 192 218-429 161-370 (662)
126 4aow_A Guanine nucleotide-bind 95.8 0.57 2E-05 43.5 18.0 148 251-429 186-338 (340)
127 2pm9_A Protein WEB1, protein t 95.8 0.56 1.9E-05 45.1 18.4 148 206-376 178-338 (416)
128 2hqs_A Protein TOLB; TOLB, PAL 95.7 0.5 1.7E-05 46.2 18.1 185 170-382 203-394 (415)
129 2ast_B S-phase kinase-associat 95.7 0.0025 8.4E-08 60.9 1.1 44 107-150 6-49 (336)
130 2hes_X YDR267CP; beta-propelle 95.7 0.12 4.2E-06 48.8 13.1 193 205-428 118-328 (330)
131 1r5m_A SIR4-interacting protei 95.7 0.33 1.1E-05 46.6 16.5 186 160-377 161-363 (425)
132 1npe_A Nidogen, entactin; glyc 95.7 1.2 4.1E-05 40.3 20.6 189 160-379 47-242 (267)
133 3dwl_C Actin-related protein 2 95.6 0.17 5.8E-06 48.3 14.0 226 168-412 31-272 (377)
134 2pbi_B Guanine nucleotide-bind 95.6 1.6 5.6E-05 41.3 21.0 175 205-413 165-348 (354)
135 1r5m_A SIR4-interacting protei 95.6 0.69 2.4E-05 44.3 18.2 223 161-428 121-361 (425)
136 2z3z_A Dipeptidyl aminopeptida 95.6 1.7 5.7E-05 45.4 22.5 186 218-429 235-436 (706)
137 1pjx_A Dfpase, DIISOPROPYLFLUO 95.5 0.29 9.9E-06 45.2 14.6 187 161-376 83-300 (314)
138 1flg_A Protein (quinoprotein e 95.5 0.74 2.5E-05 47.5 18.9 114 245-380 64-200 (582)
139 1npe_A Nidogen, entactin; glyc 95.4 1.5 5.1E-05 39.6 24.9 184 205-429 47-239 (267)
140 4gqb_B Methylosome protein 50; 95.3 0.44 1.5E-05 45.4 15.7 186 205-429 93-290 (344)
141 2ghs_A AGR_C_1268P; regucalcin 95.3 0.96 3.3E-05 42.5 17.9 143 205-374 60-209 (326)
142 1jmx_B Amine dehydrogenase; ox 95.3 0.86 2.9E-05 42.4 17.5 154 160-327 10-179 (349)
143 3fvz_A Peptidyl-glycine alpha- 95.3 1.9 6.5E-05 40.4 23.4 194 218-429 69-278 (329)
144 3ott_A Two-component system se 95.3 3.1 0.0001 44.1 23.7 215 161-412 384-617 (758)
145 1qks_A Cytochrome CD1 nitrite 95.3 1.6 5.6E-05 44.7 20.6 241 160-441 166-434 (567)
146 3i2n_A WD repeat-containing pr 95.2 0.7 2.4E-05 43.2 16.6 151 207-379 32-203 (357)
147 4g56_B MGC81050 protein; prote 95.2 0.33 1.1E-05 46.5 14.4 186 205-429 105-302 (357)
148 3ei3_B DNA damage-binding prot 95.2 2 6.9E-05 40.7 20.2 182 207-428 87-282 (383)
149 1yfq_A Cell cycle arrest prote 95.2 1.9 6.6E-05 39.8 22.4 185 161-376 24-226 (342)
150 2ynn_A Coatomer subunit beta'; 95.2 1.5 5E-05 40.5 18.5 183 205-429 24-218 (304)
151 1w6s_A Methanol dehydrogenase 95.2 3.5 0.00012 42.6 29.5 213 159-380 61-349 (599)
152 1sq9_A Antiviral protein SKI8; 95.1 1.6 5.3E-05 41.6 19.1 195 207-429 82-323 (397)
153 4a11_B DNA excision repair pro 95.1 1.7 5.9E-05 41.2 19.3 157 205-377 111-278 (408)
154 3mkq_A Coatomer beta'-subunit; 95.0 0.87 3E-05 48.3 18.4 185 205-429 24-218 (814)
155 1erj_A Transcriptional repress 95.0 1.4 4.9E-05 42.4 18.4 197 205-429 134-342 (393)
156 1ijq_A LDL receptor, low-densi 95.0 2.4 8.2E-05 39.7 26.3 214 168-428 8-238 (316)
157 2fp8_A Strictosidine synthase; 94.9 2 7E-05 40.0 18.9 232 163-428 33-313 (322)
158 2pm9_A Protein WEB1, protein t 94.9 1.7 5.8E-05 41.5 18.8 191 206-429 126-338 (416)
159 3bg1_A Protein SEC13 homolog; 94.8 0.3 1E-05 45.7 12.7 199 205-428 24-247 (316)
160 1pby_B Quinohemoprotein amine 94.8 1 3.5E-05 41.5 16.3 108 161-279 46-167 (337)
161 3f3f_A Nucleoporin SEH1; struc 94.7 2.5 8.4E-05 38.7 23.1 147 206-376 71-250 (351)
162 3iz6_a 40S ribosomal protein R 94.7 3.1 0.0001 39.7 20.8 232 161-429 79-330 (380)
163 2p4o_A Hypothetical protein; p 94.7 2.7 9.4E-05 38.8 22.7 191 205-427 42-241 (306)
164 2ghs_A AGR_C_1268P; regucalcin 94.5 3.1 0.00011 38.9 20.3 191 161-381 61-266 (326)
165 3fm0_A Protein CIAO1; WDR39,SG 94.5 0.78 2.7E-05 43.4 14.8 149 249-429 27-182 (345)
166 1nir_A Nitrite reductase; hemo 94.5 0.45 1.6E-05 48.6 13.9 240 160-429 190-459 (543)
167 3hrp_A Uncharacterized protein 94.4 3.9 0.00013 39.8 21.5 150 204-376 140-299 (409)
168 3i2n_A WD repeat-containing pr 94.4 1.2 4.2E-05 41.4 16.1 174 169-375 43-243 (357)
169 3v65_B Low-density lipoprotein 94.4 3.8 0.00013 39.6 25.1 221 160-428 87-318 (386)
170 3hrp_A Uncharacterized protein 94.4 4.1 0.00014 39.7 26.3 203 160-383 141-362 (409)
171 2vdu_B TRNA (guanine-N(7)-)-me 94.3 4.2 0.00014 39.7 20.8 204 205-429 160-394 (450)
172 3sfz_A APAF-1, apoptotic pepti 94.3 3.6 0.00012 46.1 21.9 235 161-429 628-872 (1249)
173 3pe7_A Oligogalacturonate lyas 94.2 1.9 6.6E-05 40.9 17.0 199 218-429 168-385 (388)
174 1erj_A Transcriptional repress 94.1 1.4 4.8E-05 42.4 16.1 149 249-428 134-287 (393)
175 1pgu_A Actin interacting prote 94.1 2.4 8.3E-05 42.9 18.5 142 250-428 456-614 (615)
176 2xbg_A YCF48-like protein; pho 94.1 3.9 0.00013 38.4 24.1 213 161-411 47-269 (327)
177 3m0c_C LDL receptor, low-densi 94.1 7.4 0.00025 41.6 26.2 203 168-410 402-620 (791)
178 3zwl_B Eukaryotic translation 94.1 2.2 7.5E-05 39.7 17.0 195 205-428 43-249 (369)
179 1pby_B Quinohemoprotein amine 94.1 1.8 6.1E-05 39.9 16.2 149 163-327 4-167 (337)
180 3e5z_A Putative gluconolactona 94.1 2.5 8.6E-05 38.6 17.0 185 160-377 79-288 (296)
181 1pgu_A Actin interacting prote 94.0 5.1 0.00017 40.4 20.9 147 252-428 175-328 (615)
182 3b7f_A Glycosyl hydrolase, BNR 94.0 4.7 0.00016 38.8 21.0 221 160-409 22-297 (394)
183 2hz6_A Endoplasmic reticulum t 93.8 0.05 1.7E-06 52.8 4.8 185 202-438 6-199 (369)
184 4gga_A P55CDC, cell division c 93.8 5.1 0.00017 38.7 21.7 227 163-428 118-353 (420)
185 3k26_A Polycomb protein EED; W 93.7 4.4 0.00015 37.6 21.3 64 356-427 299-365 (366)
186 3hxj_A Pyrrolo-quinoline quino 93.6 0.78 2.7E-05 42.6 12.7 175 160-381 30-211 (330)
187 3p5b_L Low density lipoprotein 93.6 5.6 0.00019 38.6 24.4 208 160-409 83-307 (400)
188 2z3z_A Dipeptidyl aminopeptida 93.6 7.9 0.00027 40.2 25.9 239 169-429 100-392 (706)
189 3ei3_B DNA damage-binding prot 93.5 2 7E-05 40.7 15.9 143 251-428 87-236 (383)
190 4h5i_A Guanine nucleotide-exch 93.5 5.2 0.00018 38.0 19.6 194 204-429 143-344 (365)
191 3mmy_A MRNA export factor; mRN 93.5 3.5 0.00012 38.2 17.3 143 205-376 97-248 (368)
192 3azo_A Aminopeptidase; POP fam 93.4 5.2 0.00018 41.2 19.9 186 170-382 161-376 (662)
193 3scy_A Hypothetical bacterial 93.4 2.7 9.1E-05 39.6 16.3 150 219-377 30-188 (361)
194 4a11_B DNA excision repair pro 93.3 5.5 0.00019 37.6 18.5 230 162-429 114-366 (408)
195 3v65_B Low-density lipoprotein 93.3 5.8 0.0002 38.2 18.7 173 218-428 96-277 (386)
196 1pex_A Collagenase-3, MMP-13; 93.2 4.1 0.00014 35.7 17.0 151 201-377 29-194 (207)
197 3e5z_A Putative gluconolactona 93.1 5 0.00017 36.5 21.9 224 163-429 42-287 (296)
198 4aow_A Guanine nucleotide-bind 93.0 5.4 0.00019 36.6 18.7 146 205-377 97-248 (340)
199 2aq5_A Coronin-1A; WD40 repeat 93.0 6.6 0.00022 37.5 20.7 153 249-429 93-255 (402)
200 3odt_A Protein DOA1; ubiquitin 92.9 5.1 0.00018 36.2 22.1 222 161-429 30-256 (313)
201 1n7d_A LDL receptor, low-densi 92.9 1.7 5.9E-05 45.8 15.2 214 169-428 385-614 (699)
202 2p1m_B Transport inhibitor res 92.8 0.017 5.8E-07 59.7 -0.5 36 108-143 4-40 (594)
203 4e54_B DNA damage-binding prot 92.3 0.7 2.4E-05 45.3 10.6 145 206-377 132-284 (435)
204 1qhu_A Protein (hemopexin); be 92.2 6.7 0.00023 38.9 17.5 183 205-429 158-386 (460)
205 1qhu_A Protein (hemopexin); be 92.2 9.8 0.00033 37.7 19.6 220 161-428 159-438 (460)
206 2mad_H Methylamine dehydrogena 92.2 8.4 0.00029 36.9 24.0 104 161-278 33-159 (373)
207 3v64_C Agrin; beta propeller, 92.2 8.1 0.00028 36.6 26.9 219 160-428 44-275 (349)
208 3sfz_A APAF-1, apoptotic pepti 92.1 5.9 0.0002 44.3 19.3 104 297-429 972-1075(1249)
209 3f3f_A Nucleoporin SEH1; struc 92.1 6.8 0.00023 35.6 21.4 197 205-428 22-249 (351)
210 2ecf_A Dipeptidyl peptidase IV 92.1 6.7 0.00023 41.0 18.7 71 202-283 116-189 (741)
211 3hxj_A Pyrrolo-quinoline quino 92.0 7.3 0.00025 35.7 17.6 198 160-412 107-314 (330)
212 4gga_A P55CDC, cell division c 92.0 4.3 0.00015 39.2 15.9 135 266-428 125-261 (420)
213 3frx_A Guanine nucleotide-bind 91.9 7.7 0.00026 35.8 17.5 224 161-428 78-317 (319)
214 1ijq_A LDL receptor, low-densi 91.8 8.2 0.00028 35.9 21.2 185 160-377 41-240 (316)
215 3lrv_A PRE-mRNA-splicing facto 91.7 8.4 0.00029 35.8 18.0 106 297-429 138-245 (343)
216 3dr2_A Exported gluconolactona 91.7 4.9 0.00017 36.9 15.3 185 206-428 57-267 (305)
217 3dm0_A Maltose-binding peripla 91.6 10 0.00035 39.4 19.4 146 205-378 483-635 (694)
218 3pe7_A Oligogalacturonate lyas 91.6 7.4 0.00025 36.6 17.0 204 203-429 44-274 (388)
219 2xbg_A YCF48-like protein; pho 91.6 8.9 0.0003 35.8 23.6 224 161-426 90-320 (327)
220 3ju4_A Endo-N-acetylneuraminid 91.1 7.5 0.00025 37.5 15.2 194 227-429 269-515 (670)
221 2hz6_A Endoplasmic reticulum t 91.0 0.12 4.3E-06 49.9 3.4 145 246-438 6-156 (369)
222 2ecf_A Dipeptidyl peptidase IV 91.0 17 0.00057 37.9 20.6 203 162-382 122-375 (741)
223 4ggc_A P55CDC, cell division c 90.9 7.6 0.00026 35.1 15.8 136 266-429 45-182 (318)
224 3odt_A Protein DOA1; ubiquitin 90.6 9.3 0.00032 34.3 21.7 183 204-429 112-297 (313)
225 4e54_B DNA damage-binding prot 90.4 1.2 4.1E-05 43.6 10.1 106 250-376 132-241 (435)
226 1pex_A Collagenase-3, MMP-13; 90.2 8.8 0.0003 33.5 16.5 143 244-429 28-193 (207)
227 1qks_A Cytochrome CD1 nitrite 90.2 9.8 0.00033 38.9 17.0 243 160-428 208-477 (567)
228 3c5m_A Oligogalacturonate lyas 90.1 5 0.00017 37.9 14.1 158 218-382 216-391 (396)
229 2bkl_A Prolyl endopeptidase; m 90.0 20 0.00068 37.3 20.0 215 205-441 79-315 (695)
230 3v64_C Agrin; beta propeller, 89.8 13 0.00046 35.0 22.2 182 160-376 84-276 (349)
231 1itv_A MMP9; adaptive molecula 89.5 9.6 0.00033 32.9 16.1 146 201-377 12-176 (195)
232 1yfq_A Cell cycle arrest prote 89.3 13 0.00043 34.0 19.5 222 162-414 71-315 (342)
233 1jmx_B Amine dehydrogenase; ox 89.2 2.5 8.5E-05 39.1 11.0 68 248-327 9-78 (349)
234 3ott_A Two-component system se 89.0 25 0.00085 37.0 22.4 190 160-384 32-229 (758)
235 3gre_A Serine/threonine-protei 88.9 11 0.00038 36.1 15.9 106 297-429 181-293 (437)
236 2vdu_B TRNA (guanine-N(7)-)-me 88.7 18 0.00062 35.0 20.7 151 206-381 210-399 (450)
237 2cn3_A Xyloglucanase, beta-1,4 88.6 27 0.00091 36.8 26.8 251 160-439 35-343 (737)
238 3ogk_B Coronatine-insensitive 88.3 0.091 3.1E-06 54.1 0.0 34 111-144 14-48 (592)
239 3dr2_A Exported gluconolactona 87.9 10 0.00035 34.7 14.2 157 160-329 96-273 (305)
240 2gop_A Trilobed protease; beta 87.8 11 0.00037 34.8 14.4 178 170-382 43-258 (347)
241 3lrv_A PRE-mRNA-splicing facto 87.3 18 0.00062 33.4 20.9 179 205-409 138-330 (343)
242 3m0c_C LDL receptor, low-densi 87.2 34 0.0012 36.4 19.7 146 204-376 481-633 (791)
243 2xyi_A Probable histone-bindin 87.0 17 0.00059 35.0 15.9 143 208-375 196-353 (430)
244 3dm0_A Maltose-binding peripla 87.0 31 0.001 35.7 19.7 146 205-377 441-594 (694)
245 1n7d_A LDL receptor, low-densi 87.0 11 0.00036 39.7 15.0 147 204-378 463-617 (699)
246 3o4h_A Acylamino-acid-releasin 86.8 13 0.00045 37.5 15.4 140 218-381 90-233 (582)
247 3c75_H MADH, methylamine dehyd 86.4 8 0.00027 38.0 12.8 106 161-278 85-212 (426)
248 3gre_A Serine/threonine-protei 86.3 24 0.00081 33.8 17.5 153 249-429 181-360 (437)
249 3iz6_a 40S ribosomal protein R 86.3 23 0.00077 33.5 19.5 190 162-376 172-376 (380)
250 3o4h_A Acylamino-acid-releasin 86.3 7.7 0.00026 39.3 13.3 180 220-428 134-315 (582)
251 3tc9_A Hypothetical hydrolase; 86.0 4.7 0.00016 39.6 11.1 133 249-410 149-289 (430)
252 2oiz_A Aromatic amine dehydrog 86.0 23 0.00079 33.4 16.8 60 355-428 265-334 (361)
253 2gop_A Trilobed protease; beta 85.9 15 0.00051 33.8 14.3 101 218-331 152-259 (347)
254 2ece_A 462AA long hypothetical 85.9 27 0.00093 34.4 16.2 69 205-277 95-175 (462)
255 1nr0_A Actin interacting prote 85.8 26 0.00089 35.7 17.2 185 208-429 162-356 (611)
256 3mmy_A MRNA export factor; mRN 85.3 22 0.00076 32.5 16.8 104 250-377 54-162 (368)
257 3ba0_A Macrophage metalloelast 85.3 27 0.00091 33.4 16.3 154 201-380 186-355 (365)
258 2xdw_A Prolyl endopeptidase; a 85.2 38 0.0013 35.1 20.0 200 219-441 99-331 (710)
259 1k32_A Tricorn protease; prote 85.0 47 0.0016 36.3 19.7 151 204-382 306-468 (1045)
260 3oyo_A Hemopexin fold protein 85.0 20 0.00068 31.7 15.6 145 204-374 12-197 (225)
261 3tc9_A Hypothetical hydrolase; 84.9 3 0.0001 41.0 9.1 144 205-375 149-301 (430)
262 3b7f_A Glycosyl hydrolase, BNR 84.9 27 0.00094 33.2 23.6 200 160-386 67-334 (394)
263 2bkl_A Prolyl endopeptidase; m 84.5 41 0.0014 34.9 24.2 201 203-427 129-350 (695)
264 2p9w_A MAL S 1 allergenic prot 84.3 28 0.00095 32.8 20.4 232 160-412 24-305 (334)
265 2ymu_A WD-40 repeat protein; u 84.0 36 0.0012 33.8 22.7 179 205-427 355-538 (577)
266 4ggc_A P55CDC, cell division c 83.8 24 0.00082 31.6 21.0 227 165-429 40-274 (318)
267 1k32_A Tricorn protease; prote 83.8 55 0.0019 35.8 20.1 219 170-429 226-462 (1045)
268 2xyi_A Probable histone-bindin 83.6 11 0.00037 36.5 12.5 102 252-375 196-309 (430)
269 1su3_A Interstitial collagenas 83.5 26 0.00088 34.6 15.0 145 201-379 268-436 (450)
270 3iuj_A Prolyl endopeptidase; h 83.0 17 0.00059 37.8 14.5 145 217-385 258-415 (693)
271 2xzm_R RACK1; ribosome, transl 82.8 30 0.001 32.0 18.6 62 249-324 87-150 (343)
272 4h5i_A Guanine nucleotide-exch 81.7 34 0.0012 32.1 15.0 135 266-429 157-301 (365)
273 3c7x_A Matrix metalloproteinas 81.2 26 0.00088 30.2 13.7 143 201-377 11-177 (196)
274 1yr2_A Prolyl oligopeptidase; 80.6 23 0.00077 37.2 14.4 159 204-383 277-449 (741)
275 3frx_A Guanine nucleotide-bind 79.0 38 0.0013 30.9 16.1 143 205-377 76-229 (319)
276 2xdw_A Prolyl endopeptidase; a 78.3 67 0.0023 33.2 24.0 186 218-429 208-415 (710)
277 2ymu_A WD-40 repeat protein; u 77.7 58 0.002 32.2 22.3 179 205-427 314-497 (577)
278 3lp9_A LS-24; SEED albumin, pl 77.4 9.3 0.00032 33.9 8.6 145 205-376 15-202 (227)
279 3oyo_A Hemopexin fold protein 76.8 39 0.0013 29.8 15.3 63 355-427 127-197 (225)
280 4hw6_A Hypothetical protein, I 76.3 59 0.002 31.6 19.9 200 161-383 153-381 (433)
281 4hw6_A Hypothetical protein, I 76.2 20 0.00069 35.0 11.6 131 250-409 153-291 (433)
282 3c7x_A Matrix metalloproteinas 74.8 40 0.0014 28.9 12.6 143 245-429 11-176 (196)
283 3p5b_L Low density lipoprotein 74.4 62 0.0021 31.0 21.2 171 218-428 92-277 (400)
284 1xfd_A DIP, dipeptidyl aminope 74.4 48 0.0016 34.2 14.6 57 218-281 91-149 (723)
285 3kya_A Putative phosphatase; s 74.3 73 0.0025 31.7 19.5 204 160-382 151-416 (496)
286 3sov_A LRP-6, low-density lipo 73.8 56 0.0019 30.2 23.3 182 205-428 46-238 (318)
287 4a0p_A LRP6, LRP-6, low-densit 73.4 87 0.003 32.2 26.6 208 160-409 6-224 (628)
288 3vu4_A KMHSV2; beta-propeller 73.0 60 0.002 30.1 20.8 65 355-429 206-272 (355)
289 1su3_A Interstitial collagenas 72.0 78 0.0027 31.1 16.2 61 355-429 367-433 (450)
290 2be1_A Serine/threonine-protei 70.2 5.3 0.00018 37.9 5.4 26 355-380 55-81 (339)
291 1itv_A MMP9; adaptive molecula 69.6 53 0.0018 28.1 16.2 142 244-429 11-175 (195)
292 2mad_H Methylamine dehydrogena 69.3 78 0.0027 29.9 21.7 68 297-377 278-352 (373)
293 3sov_A LRP-6, low-density lipo 67.9 76 0.0026 29.3 22.7 183 160-377 46-240 (318)
294 3iuj_A Prolyl endopeptidase; h 67.6 1.2E+02 0.004 31.4 23.4 188 170-382 155-366 (693)
295 1nr0_A Actin interacting prote 67.6 1.1E+02 0.0037 30.9 21.6 152 204-381 200-361 (611)
296 1xfd_A DIP, dipeptidyl aminope 66.9 76 0.0026 32.6 14.2 105 219-330 38-150 (723)
297 2oaj_A Protein SNI1; WD40 repe 66.8 1.4E+02 0.0049 32.0 18.9 193 205-429 28-243 (902)
298 4a0p_A LRP6, LRP-6, low-densit 66.0 1.2E+02 0.0042 31.0 21.5 174 219-428 16-197 (628)
299 2xe4_A Oligopeptidase B; hydro 63.2 1.1E+02 0.0038 32.0 14.6 109 206-321 283-398 (751)
300 1yr2_A Prolyl oligopeptidase; 62.9 1.5E+02 0.005 30.8 22.4 198 204-427 172-394 (741)
301 3ba0_A Macrophage metalloelast 62.1 1.1E+02 0.0037 29.0 16.9 63 355-429 284-351 (365)
302 3a0f_A Xyloglucanase; beta-pro 61.6 1.6E+02 0.0056 30.9 24.6 213 160-386 33-295 (763)
303 3c75_H MADH, methylamine dehyd 59.6 1.2E+02 0.0041 29.5 13.0 73 297-383 330-408 (426)
304 1hxn_A Hemopexin, HPX; heme, b 59.2 91 0.0031 27.2 13.2 143 248-428 27-197 (219)
305 3dw8_B Serine/threonine-protei 56.8 1.3E+02 0.0044 28.2 14.7 28 355-382 353-380 (447)
306 3ju4_A Endo-N-acetylneuraminid 54.0 1.6E+02 0.0055 28.5 13.7 148 281-442 277-451 (670)
307 3lp9_A LS-24; SEED albumin, pl 53.7 53 0.0018 28.9 8.5 101 204-324 71-202 (227)
308 1gen_A Gelatinase A; hydrolase 53.0 1.1E+02 0.0039 26.5 17.7 146 201-377 36-204 (218)
309 1hxn_A Hemopexin, HPX; heme, b 52.5 1.2E+02 0.004 26.5 13.0 135 204-375 27-197 (219)
310 2oiz_A Aromatic amine dehydrog 51.2 1.5E+02 0.0053 27.4 17.8 73 297-384 265-343 (361)
311 4hvt_A Ritya.17583.B, post-pro 50.8 2.3E+02 0.0078 29.6 14.2 150 216-385 267-439 (711)
312 3sjl_D Methylamine dehydrogena 50.4 92 0.0031 29.9 10.3 70 297-378 291-366 (386)
313 1gen_A Gelatinase A; hydrolase 50.0 1.3E+02 0.0044 26.2 14.8 57 355-428 135-202 (218)
314 2ece_A 462AA long hypothetical 49.8 2E+02 0.0068 28.3 13.2 70 249-325 95-175 (462)
315 3dw8_B Serine/threonine-protei 48.7 1.7E+02 0.0059 27.3 12.7 68 355-429 188-259 (447)
316 2qe8_A Uncharacterized protein 46.9 1.7E+02 0.0059 26.7 16.3 72 355-429 77-155 (343)
317 3qqz_A Putative uncharacterize 46.9 1.6E+02 0.0054 26.3 12.8 107 297-425 38-150 (255)
318 3s94_A LRP-6, low-density lipo 46.5 2.5E+02 0.0086 28.6 23.8 169 205-409 360-538 (619)
319 2w18_A PALB2, fancn, partner a 45.2 2E+02 0.007 27.1 22.3 152 249-426 192-355 (356)
320 1ck7_A Protein (gelatinase A); 44.7 2.7E+02 0.0094 28.5 13.2 150 201-376 449-616 (631)
321 2p9w_A MAL S 1 allergenic prot 43.6 2.1E+02 0.0071 26.8 15.5 162 249-427 24-214 (334)
322 2xzm_R RACK1; ribosome, transl 42.8 1.9E+02 0.0066 26.1 18.8 142 205-375 87-244 (343)
323 2oaj_A Protein SNI1; WD40 repe 42.8 3.4E+02 0.012 29.0 14.5 103 249-378 28-132 (902)
324 1fwx_A Nitrous oxide reductase 42.6 2.2E+02 0.0074 29.0 12.0 156 205-376 101-309 (595)
325 3vu4_A KMHSV2; beta-propeller 42.3 2E+02 0.007 26.3 21.3 64 297-376 206-272 (355)
326 3s94_A LRP-6, low-density lipo 42.2 2.9E+02 0.01 28.1 20.7 146 204-378 402-554 (619)
327 3kya_A Putative phosphatase; s 41.3 2.3E+02 0.0079 28.1 11.8 107 249-374 151-277 (496)
328 1jof_A Carboxy-CIS,CIS-muconat 40.1 2.2E+02 0.0076 26.1 15.8 160 205-381 155-347 (365)
329 3sre_A PON1, serum paraoxonase 36.7 2.7E+02 0.0093 26.1 14.7 142 217-375 82-252 (355)
330 2qe8_A Uncharacterized protein 36.6 2.5E+02 0.0085 25.6 16.9 124 249-382 27-162 (343)
331 2g8s_A Glucose/sorbosone dehyd 35.3 2.2E+02 0.0075 26.4 10.3 73 355-428 80-173 (353)
332 2xe4_A Oligopeptidase B; hydro 34.6 4.1E+02 0.014 27.6 15.0 147 169-330 294-465 (751)
333 4hvt_A Ritya.17583.B, post-pro 34.6 3.5E+02 0.012 28.2 12.5 145 170-332 269-438 (711)
334 1sqj_A OXG-RCBH, oligoxylogluc 33.0 4.5E+02 0.015 27.6 29.1 214 160-386 27-280 (789)
335 1jof_A Carboxy-CIS,CIS-muconat 31.1 3.1E+02 0.011 25.1 14.4 23 161-183 157-181 (365)
336 2ism_A Putative oxidoreductase 29.6 3E+02 0.01 25.4 10.3 116 297-428 41-178 (352)
337 3sjl_D Methylamine dehydrogena 29.4 3.7E+02 0.013 25.5 20.4 63 355-429 291-364 (386)
338 3ei3_A DNA damage-binding prot 27.8 6.6E+02 0.022 27.8 17.3 137 264-428 862-1001(1158)
339 1z68_A Fibroblast activation p 27.8 4.9E+02 0.017 26.3 17.0 237 160-429 71-394 (719)
340 2oit_A Nucleoporin 214KDA; NH2 27.6 4E+02 0.014 25.3 11.8 170 235-428 90-278 (434)
341 2be1_A Serine/threonine-protei 27.5 3.8E+02 0.013 24.9 10.6 114 160-283 10-140 (339)
342 3a9g_A Putative uncharacterize 25.4 3.8E+02 0.013 24.8 10.1 116 296-428 38-178 (354)
343 3qqz_A Putative uncharacterize 25.1 3.6E+02 0.012 23.9 23.1 194 205-428 38-253 (255)
344 1sqj_A OXG-RCBH, oligoxylogluc 23.8 6.4E+02 0.022 26.3 24.2 163 206-386 28-212 (789)
345 3amr_A 3-phytase; beta-propell 20.4 5.4E+02 0.018 24.1 18.4 178 172-374 52-262 (355)
No 1
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=3.1e-42 Score=333.54 Aligned_cols=267 Identities=15% Similarity=0.245 Sum_probs=232.6
Q ss_pred ccEEEEEec---CccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceec--CCcEEEEEECCCCcEEeCC
Q 012755 160 EHWVYLACI---LMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGREL--SGFAIWMYSLIANCWSKCP 234 (457)
Q Consensus 160 ~~~l~~~~~---~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~--~~~~v~~yd~~t~~W~~l~ 234 (457)
.+.||++|| .+++++||+.+++|..++++|.+|..+. ++++++.||++||.. ..+++++||+.+++|+.++
T Consensus 11 ~~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~----~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~ 86 (306)
T 3ii7_A 11 HDYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAA----CVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKL 86 (306)
T ss_dssp CCEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCE----EEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEE
T ss_pred cceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeE----EEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECC
Confidence 467899887 6789999999999999999999887665 478899999999975 3478999999999999999
Q ss_pred CCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEECCEEEEEeccCCCCCC--
Q 012755 235 QMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFMDGKFYIIGGMSSPTDP-- 312 (457)
Q Consensus 235 ~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~-- 312 (457)
++|.+|..|++++++++||++||.+......+++++||+.+++|+.++++|.+|..|++++++++||++||.......
T Consensus 87 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 166 (306)
T 3ii7_A 87 GPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGR 166 (306)
T ss_dssp CCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCE
T ss_pred CCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCccc
Confidence 999999999999999999999999755567899999999999999999999999999999999999999998765432
Q ss_pred -CceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecC-----CCeEEEEECCCCcEEEeccCCC
Q 012755 313 -LTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQA-----TNVVKKYNKTNNSWTVVKRLPV 386 (457)
Q Consensus 313 -~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~-----~~~v~~Yd~~~~~W~~v~~~p~ 386 (457)
.+++++||+++++|+.+++++. +|..+++++++++||++||. .+++++||+++++|+.++.+|.
T Consensus 167 ~~~~~~~yd~~~~~W~~~~~~p~----------~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~ 236 (306)
T 3ii7_A 167 VLNSCEVYDPATETWTELCPMIE----------ARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPW 236 (306)
T ss_dssp ECCCEEEEETTTTEEEEECCCSS----------CCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSC
T ss_pred ccceEEEeCCCCCeEEECCCccc----------hhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCC
Confidence 7889999999999999998877 88999999999999999984 5689999999999999999987
Q ss_pred ccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCCCCCCCCeeEeccccccCceEEe
Q 012755 387 RANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDGNSGEAQWNELAVRERAGAFVYN 451 (457)
Q Consensus 387 ~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~~w~~~~W~~l~~~~~~~~~~~~ 451 (457)
++. +++++.++++|||+||.++.. ...++++||++++ +|+.++.++..+..+.+
T Consensus 237 ~r~-----~~~~~~~~~~i~v~GG~~~~~-~~~~~~~yd~~~~-----~W~~~~~~~~~r~~~~~ 290 (306)
T 3ii7_A 237 KGV-----TVKCAAVGSIVYVLAGFQGVG-RLGHILEYNTETD-----KWVANSKVRAFPVTSCL 290 (306)
T ss_dssp CBS-----CCEEEEETTEEEEEECBCSSS-BCCEEEEEETTTT-----EEEEEEEEECCSCTTCE
T ss_pred Ccc-----ceeEEEECCEEEEEeCcCCCe-eeeeEEEEcCCCC-----eEEeCCCcccccceeEE
Confidence 764 234667899999999987543 5578999999998 89999876644443333
No 2
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.1e-41 Score=330.32 Aligned_cols=268 Identities=25% Similarity=0.402 Sum_probs=233.5
Q ss_pred cccEEEEEec-----CccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceec-------CCcEEEEEECC
Q 012755 159 VEHWVYLACI-----LMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGREL-------SGFAIWMYSLI 226 (457)
Q Consensus 159 ~~~~l~~~~~-----~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~-------~~~~v~~yd~~ 226 (457)
.++.||++|| .+++++||+.+++|..++++|.+|..+. +++.++.||++||.. ..+++++||+.
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~----~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~ 98 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLA----GCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPM 98 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCE----EEEETTEEEEECCEEEETTEEEECCCEEEEETT
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccce----EEEECCEEEEECCCcCCCCCCeecceEEEECCC
Confidence 3778999987 5789999999999999999998887654 477899999999972 23689999999
Q ss_pred CCcEEeCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEECCEEEEEecc
Q 012755 227 ANCWSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFMDGKFYIIGGM 306 (457)
Q Consensus 227 t~~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~GG~ 306 (457)
+++|++++++|.+|..|++++++++||++||.+.. ...+++++||+.+++|+.++++|.+|..+++++++++||++||.
T Consensus 99 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 177 (308)
T 1zgk_A 99 TNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGC-IHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGF 177 (308)
T ss_dssp TTEEEECCCCSSCCBTCEEEEETTEEEEECCEETT-EECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCB
T ss_pred CCeEeECCCCCcCccccEEEEECCEEEEEcCCCCC-cccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCC
Confidence 99999999999999999999999999999998764 45789999999999999999999999999999999999999998
Q ss_pred CCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecC-----CCeEEEEECCCCcEEEe
Q 012755 307 SSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQA-----TNVVKKYNKTNNSWTVV 381 (457)
Q Consensus 307 ~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~-----~~~v~~Yd~~~~~W~~v 381 (457)
+... ..+++++||+.+++|+.+++++. +|..+++++++++||++||. .+++++||+++++|+.+
T Consensus 178 ~~~~-~~~~~~~yd~~~~~W~~~~~~p~----------~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 246 (308)
T 1zgk_A 178 DGTN-RLNSAECYYPERNEWRMITAMNT----------IRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFV 246 (308)
T ss_dssp CSSC-BCCCEEEEETTTTEEEECCCCSS----------CCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEC
T ss_pred CCCC-cCceEEEEeCCCCeEeeCCCCCC----------ccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEEC
Confidence 7654 47889999999999999998877 88999999999999999985 57899999999999999
Q ss_pred ccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCCCCCCCCeeEeccccccCceEEeee
Q 012755 382 KRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDGNSGEAQWNELAVRERAGAFVYNCA 453 (457)
Q Consensus 382 ~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~~w~~~~W~~l~~~~~~~~~~~~~~ 453 (457)
+.+|.++.. .+++.++++|||+||.++. ....++++||++++ +|+.++.+|..+..+.+|+
T Consensus 247 ~~~p~~r~~-----~~~~~~~~~i~v~GG~~~~-~~~~~v~~yd~~~~-----~W~~~~~~p~~r~~~~~~~ 307 (308)
T 1zgk_A 247 APMKHRRSA-----LGITVHQGRIYVLGGYDGH-TFLDSVECYDPDTD-----TWSEVTRMTSGRSGVGVAV 307 (308)
T ss_dssp CCCSSCCBS-----CEEEEETTEEEEECCBCSS-CBCCEEEEEETTTT-----EEEEEEECSSCCBSCEEEE
T ss_pred CCCCCCccc-----eEEEEECCEEEEEcCcCCC-cccceEEEEcCCCC-----EEeecCCCCCCcccceeEe
Confidence 998877642 3456789999999998753 34579999999998 8999998886555444443
No 3
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=9e-42 Score=329.64 Aligned_cols=269 Identities=21% Similarity=0.358 Sum_probs=231.5
Q ss_pred ccEEEEEec-----CccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecC---CcEEEEEECCCCcEE
Q 012755 160 EHWVYLACI-----LMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELS---GFAIWMYSLIANCWS 231 (457)
Q Consensus 160 ~~~l~~~~~-----~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~---~~~v~~yd~~t~~W~ 231 (457)
++.||++|| .+++++||+.+++|..++++|.+|..+. +++.++.||++||... .+++++||+.+++|+
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~----~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 90 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAG----MVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWT 90 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCE----EEEETTEEEEESCBCSSSBCCCEEEEETTTTEEE
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccce----EEEECCEEEEEeCcCCCccccceEEECCCCCcee
Confidence 567888887 4789999999999999999998887654 4778999999999653 368999999999999
Q ss_pred eCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEECCEEEEEeccCCCC-
Q 012755 232 KCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFMDGKFYIIGGMSSPT- 310 (457)
Q Consensus 232 ~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~- 310 (457)
.++++|.+|..|++++++++||++||.++. ..++++++||+.+++|+.++++|.+|..+++++++++||++||.+...
T Consensus 91 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 169 (302)
T 2xn4_A 91 SVANMRDRRSTLGAAVLNGLLYAVGGFDGS-TGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASR 169 (302)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEEEEECSS-CEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTT
T ss_pred eCCCCCccccceEEEEECCEEEEEcCCCCC-ccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCC
Confidence 999999999999999999999999998764 467899999999999999999999999999999999999999987543
Q ss_pred CCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecC-----CCeEEEEECCCCcEEEeccCC
Q 012755 311 DPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQA-----TNVVKKYNKTNNSWTVVKRLP 385 (457)
Q Consensus 311 ~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~-----~~~v~~Yd~~~~~W~~v~~~p 385 (457)
...+++++||+.+++|+.+++++. +|..+++++++++||++||. .+++++||+++++|+.++.+|
T Consensus 170 ~~~~~~~~yd~~~~~W~~~~~~p~----------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~ 239 (302)
T 2xn4_A 170 QCLSTVECYNATTNEWTYIAEMST----------RRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMN 239 (302)
T ss_dssp EECCCEEEEETTTTEEEEECCCSS----------CCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCS
T ss_pred ccccEEEEEeCCCCcEEECCCCcc----------ccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCC
Confidence 246789999999999999998877 88899999999999999985 568999999999999999988
Q ss_pred CccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCCCCCCCCeeEec-cccccCceEEeeee
Q 012755 386 VRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDGNSGEAQWNELA-VRERAGAFVYNCAV 454 (457)
Q Consensus 386 ~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~~w~~~~W~~l~-~~~~~~~~~~~~~~ 454 (457)
.++. +++++.++++|||+||.++.. ...++++||++++ +|+.++ .++..+..+.+|++
T Consensus 240 ~~r~-----~~~~~~~~~~i~v~GG~~~~~-~~~~v~~yd~~~~-----~W~~~~~~~~~~r~~~~~~~~ 298 (302)
T 2xn4_A 240 MCRR-----NAGVCAVNGLLYVVGGDDGSC-NLASVEYYNPTTD-----KWTVVSSCMSTGRSYAGVTVI 298 (302)
T ss_dssp SCCB-----SCEEEEETTEEEEECCBCSSS-BCCCEEEEETTTT-----EEEECSSCCSSCCBSCEEEEE
T ss_pred Cccc-----cCeEEEECCEEEEECCcCCCc-ccccEEEEcCCCC-----eEEECCcccCcccccceEEEe
Confidence 7764 234667899999999987543 4568999999998 899997 56644444444443
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=7e-41 Score=323.13 Aligned_cols=268 Identities=22% Similarity=0.366 Sum_probs=232.7
Q ss_pred cccEEEEEec-------CccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecC---CcEEEEEECCCC
Q 012755 159 VEHWVYLACI-------LMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELS---GFAIWMYSLIAN 228 (457)
Q Consensus 159 ~~~~l~~~~~-------~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~---~~~v~~yd~~t~ 228 (457)
.++.+|++|| .+++++||+.+++|..++++|.+|..+. +++.++.||++||... .+++++||+.++
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~----~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~ 88 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVA----SVSLHDRIYVIGGYDGRSRLSSVECLDYTAD 88 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCE----EEEETTEEEEECCBCSSCBCCCEEEEETTCC
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhcccc----EEEECCEEEEEcCCCCCccCceEEEEECCCC
Confidence 3677888887 4689999999999999999998876654 4778999999999653 368999999999
Q ss_pred c---EEeCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEECCEEEEEec
Q 012755 229 C---WSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFMDGKFYIIGG 305 (457)
Q Consensus 229 ~---W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~GG 305 (457)
+ |+.++++|.+|..|++++++++||++||.++. ...+++++||+.+++|+.++++|.+|..|++++++++||++||
T Consensus 89 ~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 167 (301)
T 2vpj_A 89 EDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGS-RRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGG 167 (301)
T ss_dssp TTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSS-CBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECC
T ss_pred CCCeeEECCCCCCCccceeEEEECCEEEEEcccCCC-cccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECC
Confidence 9 99999999999999999999999999998754 4578999999999999999999999999999999999999999
Q ss_pred cCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecC-----CCeEEEEECCCCcEEE
Q 012755 306 MSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQA-----TNVVKKYNKTNNSWTV 380 (457)
Q Consensus 306 ~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~-----~~~v~~Yd~~~~~W~~ 380 (457)
.+... ..+++++||+.+++|+.+++++. +|..+++++++++||++||. .+++++||+++++|+.
T Consensus 168 ~~~~~-~~~~~~~~d~~~~~W~~~~~~p~----------~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 236 (301)
T 2vpj_A 168 YDGLN-ILNSVEKYDPHTGHWTNVTPMAT----------KRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT 236 (301)
T ss_dssp BCSSC-BCCCEEEEETTTTEEEEECCCSS----------CCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCCCc-ccceEEEEeCCCCcEEeCCCCCc----------ccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEE
Confidence 87654 67889999999999999998877 88899999999999999985 5789999999999999
Q ss_pred eccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCCCCCCCCeeEeccccccCceEEeee
Q 012755 381 VKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDGNSGEAQWNELAVRERAGAFVYNCA 453 (457)
Q Consensus 381 v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~~w~~~~W~~l~~~~~~~~~~~~~~ 453 (457)
++.+|.++.. ++++.++++|||+||.++.. ...++++||++++ +|+.++.+|..+..+.+|+
T Consensus 237 ~~~~p~~r~~-----~~~~~~~~~i~v~GG~~~~~-~~~~v~~yd~~~~-----~W~~~~~~~~~r~~~~~~~ 298 (301)
T 2vpj_A 237 VTSMTTPRCY-----VGATVLRGRLYAIAGYDGNS-LLSSIECYDPIID-----SWEVVTSMGTQRCDAGVCV 298 (301)
T ss_dssp ECCCSSCCBS-----CEEEEETTEEEEECCBCSSS-BEEEEEEEETTTT-----EEEEEEEEEEEEESCEEEE
T ss_pred CCCCCCcccc-----eeEEEECCEEEEEcCcCCCc-ccccEEEEcCCCC-----eEEEcCCCCcccccceEEE
Confidence 9998877642 34567899999999987543 5679999999997 8999988875554444444
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=5e-41 Score=326.60 Aligned_cols=258 Identities=19% Similarity=0.294 Sum_probs=219.1
Q ss_pred ccEEEEEecCccEEEEeCCCCcEEeCCCCCC--CccccCCCeeeEEeCCEEEEEceec-----C----CcEEEEEECCCC
Q 012755 160 EHWVYLACILMPWEAFDPLRQRWMRLPRMQC--DECFTSADKESLAVGTQLLVFGREL-----S----GFAIWMYSLIAN 228 (457)
Q Consensus 160 ~~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~--~~~~~~~~~~~~~~~~~lyv~GG~~-----~----~~~v~~yd~~t~ 228 (457)
++.||++++ +++++|||.+++|.. +++|. +|..+. +++.++.||++||.. . .+++++||+.++
T Consensus 4 ~~~l~~~GG-~~~~~yd~~~~~W~~-~~~~~p~~r~~~~----~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~ 77 (315)
T 4asc_A 4 QDLIFMISE-EGAVAYDPAANECYC-ASLSSQVPKNHVS----LVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDS 77 (315)
T ss_dssp EEEEEEEET-TEEEEEETTTTEEEE-EECCCCSCSSEEE----EECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTT
T ss_pred ceEEEEEcC-CceEEECCCCCeEec-CCCCCCCCccceE----EEEECCEEEEEcCcccCCCCCccccccceEEecCCCC
Confidence 456788876 789999999999987 55654 454433 577899999999952 1 145999999999
Q ss_pred cEEeCCCCCCCccceeEEeeCCEEEEEeeec--CCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEECCEEEEEecc
Q 012755 229 CWSKCPQMNLPRCLFGSSSLGEVAIVAGGTD--KNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFMDGKFYIIGGM 306 (457)
Q Consensus 229 ~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~GG~ 306 (457)
+|+.++++|.+|..|++++++++||++||.+ ......+++++||+.+++|+.++++|.+|..|++++++++||++||.
T Consensus 78 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 157 (315)
T 4asc_A 78 EWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGK 157 (315)
T ss_dssp EEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCB
T ss_pred eEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCC
Confidence 9999999999999999999999999999976 23467899999999999999999999999999999999999999998
Q ss_pred CCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecC-----CCeEEEEECCCCcEEEe
Q 012755 307 SSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQA-----TNVVKKYNKTNNSWTVV 381 (457)
Q Consensus 307 ~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~-----~~~v~~Yd~~~~~W~~v 381 (457)
.......+++++||+.+++|+.+++++. +|..+++++++++||++||. .+++++||+++++|+.+
T Consensus 158 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~----------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 227 (315)
T 4asc_A 158 GSDRKCLNKMCVYDPKKFEWKELAPMQT----------ARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPF 227 (315)
T ss_dssp CTTSCBCCCEEEEETTTTEEEECCCCSS----------CCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEE
T ss_pred CCCCcccceEEEEeCCCCeEEECCCCCC----------chhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEEC
Confidence 6555578899999999999999998877 89999999999999999985 34799999999999999
Q ss_pred ccCCCccCCCCcceEEEEEeCCEEEEEcCcCCC----C----CceEEEEEeeCCCCCCCCCCeeEecccc
Q 012755 382 KRLPVRANSFNGWGLAFKACGNSLLVIGGHREL----Q----GEIIVLHSWDPTDGNSGEAQWNELAVRE 443 (457)
Q Consensus 382 ~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~----~----~~~~~v~~y~~~~~~w~~~~W~~l~~~~ 443 (457)
+.+|.++.. ++++.++++|||+||..+. . ....++++||++++ +|+.+...+
T Consensus 228 ~~~p~~r~~-----~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~-----~W~~~~~~~ 287 (315)
T 4asc_A 228 EAFPQERSS-----LSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK-----KWEGVLREI 287 (315)
T ss_dssp CCCSSCCBS-----CEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT-----EEEEEESCS
T ss_pred CCCCCcccc-----eeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCC-----hhhhhccCC
Confidence 998877642 3566789999999998532 1 23578999999998 899885443
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=2.9e-40 Score=321.59 Aligned_cols=254 Identities=19% Similarity=0.326 Sum_probs=216.2
Q ss_pred ccEEEEEecCccEEEEeCCCCcEEeCCCCC--CCccccCCCeeeEEeCCEEEEEceec---------CCcEEEEEECCCC
Q 012755 160 EHWVYLACILMPWEAFDPLRQRWMRLPRMQ--CDECFTSADKESLAVGTQLLVFGREL---------SGFAIWMYSLIAN 228 (457)
Q Consensus 160 ~~~l~~~~~~~~~~~ydp~~~~W~~l~~~p--~~~~~~~~~~~~~~~~~~lyv~GG~~---------~~~~v~~yd~~t~ 228 (457)
++.||++++ ..+++|||.+++|... +++ .+|..+ .+++.++.||++||.. ..+.+++||+.++
T Consensus 15 ~~~i~~~GG-~~~~~yd~~~~~W~~~-~~~~~~~r~~~----~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~ 88 (318)
T 2woz_A 15 KDLILLVND-TAAVAYDPMENECYLT-ALAEQIPRNHS----SIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSS 88 (318)
T ss_dssp EEEEEEECS-SEEEEEETTTTEEEEE-EECTTSCSSEE----EEECSSSCEEEEESSCC-------CCCBEEEEEETTTT
T ss_pred cchhhhccc-cceEEECCCCCceecc-cCCccCCccce----EEEEECCEEEEECCcccCccccCCCccccEEEEeCCCC
Confidence 567888886 4589999999999884 344 344443 2577899999999942 1235999999999
Q ss_pred cEEeCCCCCCCccceeEEeeCCEEEEEeeecC-CCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEECCEEEEEeccC
Q 012755 229 CWSKCPQMNLPRCLFGSSSLGEVAIVAGGTDK-NGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFMDGKFYIIGGMS 307 (457)
Q Consensus 229 ~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~GG~~ 307 (457)
+|++++++|.+|..|++++++++||++||.+. .....+++++||+.+++|+.++++|.+|..|++++++++||++||..
T Consensus 89 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 168 (318)
T 2woz_A 89 EWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKT 168 (318)
T ss_dssp EEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEE
T ss_pred cEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCC
Confidence 99999999999999999999999999999863 34568899999999999999999999999999999999999999986
Q ss_pred CCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecC-----CCeEEEEECCCCcEEEec
Q 012755 308 SPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQA-----TNVVKKYNKTNNSWTVVK 382 (457)
Q Consensus 308 ~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~-----~~~v~~Yd~~~~~W~~v~ 382 (457)
......+++++||+.+++|+.+++++. +|..+++++++++||++||. .+++++||+++++|+.++
T Consensus 169 ~~~~~~~~~~~yd~~~~~W~~~~~~p~----------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 238 (318)
T 2woz_A 169 DDKKCTNRVFIYNPKKGDWKDLAPMKT----------PRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMT 238 (318)
T ss_dssp SSSCBCCCEEEEETTTTEEEEECCCSS----------CCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECC
T ss_pred CCCCccceEEEEcCCCCEEEECCCCCC----------CcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECC
Confidence 555568899999999999999998877 88899999999999999984 467999999999999999
Q ss_pred cCCCccCCCCcceEEEEEeCCEEEEEcCcCCCC--------CceEEEEEeeCCCCCCCCCCeeEe
Q 012755 383 RLPVRANSFNGWGLAFKACGNSLLVIGGHRELQ--------GEIIVLHSWDPTDGNSGEAQWNEL 439 (457)
Q Consensus 383 ~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~--------~~~~~v~~y~~~~~~w~~~~W~~l 439 (457)
.+|.++. +++++.++++|||+||..... ....++++||++++ +|+.+
T Consensus 239 ~~p~~r~-----~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~-----~W~~~ 293 (318)
T 2woz_A 239 EFPQERS-----SISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK-----EWAGM 293 (318)
T ss_dssp CCSSCCB-----SCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT-----EEEEE
T ss_pred CCCCccc-----ceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC-----Eehhh
Confidence 9988764 235668899999999986421 23568999999998 89988
No 7
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=2.8e-38 Score=312.46 Aligned_cols=263 Identities=17% Similarity=0.169 Sum_probs=212.5
Q ss_pred ccEEEEEec--CccEEEEeCC--CCcEEeCCCCC-CCccccCCCeeeEEeCCEEEEEcee-c-------CCcEEEEEECC
Q 012755 160 EHWVYLACI--LMPWEAFDPL--RQRWMRLPRMQ-CDECFTSADKESLAVGTQLLVFGRE-L-------SGFAIWMYSLI 226 (457)
Q Consensus 160 ~~~l~~~~~--~~~~~~ydp~--~~~W~~l~~~p-~~~~~~~~~~~~~~~~~~lyv~GG~-~-------~~~~v~~yd~~ 226 (457)
++.||++|| .+++++||+. +++|..++++| .+|..+. +++++++||++||. . ..+++++||+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~----~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~ 94 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQAT----SAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPK 94 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCE----EEEETTEEEEECCEEECTTSCEEECCCEEEEETT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccce----EEEECCEEEEEcCCCCCCCccceeeccEEEEeCC
Confidence 788999987 5789999998 48999999999 6776654 47889999999997 2 13689999999
Q ss_pred CCcEEeCCCCC-CCccceeEEeeCCEEEEEeeecCCC---------------------------------CccceEEEEe
Q 012755 227 ANCWSKCPQMN-LPRCLFGSSSLGEVAIVAGGTDKNG---------------------------------CILKSAELYN 272 (457)
Q Consensus 227 t~~W~~l~~lp-~~r~~~~~~~~~~~iyv~GG~~~~~---------------------------------~~~~~v~~yd 272 (457)
+++|+++++++ .+|..|++++++++|||+||.+... ..++++++||
T Consensus 95 ~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd 174 (357)
T 2uvk_A 95 TNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFD 174 (357)
T ss_dssp TTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEE
T ss_pred CCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEe
Confidence 99999999988 9999999999999999999976421 1357999999
Q ss_pred CCCCcEEECCCCCCCCcc-eeEEEECCEEEEEeccCCCCCCCceEEEEEC--CCCceEEcCCCCCCCCCCCCCCCCCCCC
Q 012755 273 SELGTWETLPDMNLPRKL-CSGFFMDGKFYIIGGMSSPTDPLTCGEEYNL--ETRTWKRIENMYPSNVGTQSNPAMSSPP 349 (457)
Q Consensus 273 ~~t~~W~~~~~~p~~r~~-~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~--~t~~W~~~~~~~~~~~~~~~~~~~r~~~ 349 (457)
+.+++|+.++++|.+|.. +++++++++||++||..........+++||+ ++++|+.+++++. +..+..+
T Consensus 175 ~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~--------~~~~~~~ 246 (357)
T 2uvk_A 175 PSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSS--------PDGVAGG 246 (357)
T ss_dssp TTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSST--------TTCCBSC
T ss_pred CCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCC--------Ccccccc
Confidence 999999999999987654 8999999999999998755445678899986 9999999998865 2256678
Q ss_pred EEEEECCEEEEEecCC----------------------CeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCEEEE
Q 012755 350 LVAVVNNQLYSADQAT----------------------NVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNSLLV 407 (457)
Q Consensus 350 ~~~~~~g~ly~~gg~~----------------------~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv 407 (457)
++++++++||++||.. .++++||+++++|+.++.+|.++.. .+++.++++|||
T Consensus 247 ~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-----~~~~~~~~~i~v 321 (357)
T 2uvk_A 247 FAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAY-----GVSLPWNNSLLI 321 (357)
T ss_dssp EEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBS-----SEEEEETTEEEE
T ss_pred eEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccc-----ceeEEeCCEEEE
Confidence 8999999999999842 3689999999999999999987642 345678999999
Q ss_pred EcCcCCCCCceEEEEEeeCCCCCCCCCCeeEeccccc
Q 012755 408 IGGHRELQGEIIVLHSWDPTDGNSGEAQWNELAVRER 444 (457)
Q Consensus 408 ~GG~~~~~~~~~~v~~y~~~~~~w~~~~W~~l~~~~~ 444 (457)
+||.+.......++++++.+++ +|.++...++
T Consensus 322 ~GG~~~~~~~~~~v~~l~~~~~-----~~~~~~~~~~ 353 (357)
T 2uvk_A 322 IGGETAGGKAVTDSVLITVKDN-----KVTVQNLEHH 353 (357)
T ss_dssp EEEECGGGCEEEEEEEEEC-CC-----SCEEEC----
T ss_pred EeeeCCCCCEeeeEEEEEEcCc-----EeEeeecccc
Confidence 9998866555689999999987 7888766553
No 8
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.3e-36 Score=290.59 Aligned_cols=250 Identities=21% Similarity=0.355 Sum_probs=208.4
Q ss_pred ccccChhhhhhhccCcchhhhhcccc--cccEEEEEec------CccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEe
Q 012755 133 LSCLNRKFKSLIASGYLYKLRRQLGM--VEHWVYLACI------LMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAV 204 (457)
Q Consensus 133 l~~v~k~w~~li~s~~~~~~r~~~~~--~~~~l~~~~~------~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~ 204 (457)
+.....+|..+. .++..|..+.. .++.||++|| .++++.||+.+++|..++++|.+|..+. ++++
T Consensus 35 ~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~----~~~~ 107 (302)
T 2xn4_A 35 YDFKEERWHQVA---ELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLG----AAVL 107 (302)
T ss_dssp EETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCE----EEEE
T ss_pred EcCcCCcEeEcc---cCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceE----EEEE
Confidence 344455677663 33334444443 3789999987 4679999999999999999998887665 4778
Q ss_pred CCEEEEEceecCC---cEEEEEECCCCcEEeCCCCCCCccceeEEeeCCEEEEEeeecCCC-CccceEEEEeCCCCcEEE
Q 012755 205 GTQLLVFGRELSG---FAIWMYSLIANCWSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNG-CILKSAELYNSELGTWET 280 (457)
Q Consensus 205 ~~~lyv~GG~~~~---~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~v~~yd~~t~~W~~ 280 (457)
++.||++||.... +++++||+.+++|+.++++|.+|..|++++++++||++||.+... ...+++++||+.+++|+.
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~ 187 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTY 187 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEE
Confidence 9999999997543 679999999999999999999999999999999999999987653 357899999999999999
Q ss_pred CCCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEE
Q 012755 281 LPDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYS 360 (457)
Q Consensus 281 ~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~ 360 (457)
++++|.+|..|++++++++||++||.++.. ..+++++||+++++|+.+++++. +|..+++++++++||+
T Consensus 188 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~~~----------~r~~~~~~~~~~~i~v 256 (302)
T 2xn4_A 188 IAEMSTRRSGAGVGVLNNLLYAVGGHDGPL-VRKSVEVYDPTTNAWRQVADMNM----------CRRNAGVCAVNGLLYV 256 (302)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCBSSSS-BCCCEEEEETTTTEEEEECCCSS----------CCBSCEEEEETTEEEE
T ss_pred CCCCccccccccEEEECCEEEEECCCCCCc-ccceEEEEeCCCCCEeeCCCCCC----------ccccCeEEEECCEEEE
Confidence 999999999999999999999999987543 57889999999999999998877 7888999999999999
Q ss_pred EecC-----CCeEEEEECCCCcEEEec-cCCCccCCCCcceEEEEEeCCEE
Q 012755 361 ADQA-----TNVVKKYNKTNNSWTVVK-RLPVRANSFNGWGLAFKACGNSL 405 (457)
Q Consensus 361 ~gg~-----~~~v~~Yd~~~~~W~~v~-~~p~~~~~~~~~~~~~~~~~g~l 405 (457)
+||. .+++++||+++++|+.++ .||.++.. +++++++++|
T Consensus 257 ~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~r~~-----~~~~~~~~~i 302 (302)
T 2xn4_A 257 VGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRSY-----AGVTVIDKRL 302 (302)
T ss_dssp ECCBCSSSBCCCEEEEETTTTEEEECSSCCSSCCBS-----CEEEEEEC--
T ss_pred ECCcCCCcccccEEEEcCCCCeEEECCcccCccccc-----ceEEEecccC
Confidence 9984 467999999999999997 78877642 3455666654
No 9
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=5.4e-37 Score=298.11 Aligned_cols=256 Identities=17% Similarity=0.240 Sum_probs=211.2
Q ss_pred cccccChhhhhhhccCcchhhhhcccc--cccEEEEEecC------------ccEEEEeCCCCcEEeCCCCCCCccccCC
Q 012755 132 TLSCLNRKFKSLIASGYLYKLRRQLGM--VEHWVYLACIL------------MPWEAFDPLRQRWMRLPRMQCDECFTSA 197 (457)
Q Consensus 132 ~l~~v~k~w~~li~s~~~~~~r~~~~~--~~~~l~~~~~~------------~~~~~ydp~~~~W~~l~~~p~~~~~~~~ 197 (457)
.+-...++|.. ...| .+..|..+.. .++.||++||. +.++.||+.+++|..++++|.+|..+.
T Consensus 17 ~yd~~~~~W~~-~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~- 93 (315)
T 4asc_A 17 AYDPAANECYC-ASLS-SQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFG- 93 (315)
T ss_dssp EEETTTTEEEE-EECC-CCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCE-
T ss_pred EECCCCCeEec-CCCC-CCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhcee-
Confidence 34445566764 2211 1224444443 37889999872 348999999999999999998887665
Q ss_pred CeeeEEeCCEEEEEceec------CCcEEEEEECCCCcEEeCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEE
Q 012755 198 DKESLAVGTQLLVFGREL------SGFAIWMYSLIANCWSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELY 271 (457)
Q Consensus 198 ~~~~~~~~~~lyv~GG~~------~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~y 271 (457)
+++.++.||++||.. ..+++++||+.+++|++++++|.+|..|++++++++|||+||.+......+++++|
T Consensus 94 ---~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~y 170 (315)
T 4asc_A 94 ---LGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVY 170 (315)
T ss_dssp ---EEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEE
T ss_pred ---EEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEE
Confidence 478899999999953 23789999999999999999999999999999999999999996555678999999
Q ss_pred eCCCCcEEECCCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEE
Q 012755 272 NSELGTWETLPDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLV 351 (457)
Q Consensus 272 d~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~ 351 (457)
|+.+++|+.++++|.+|..|++++++++||++||.+... ..+++++||+++++|+.+++++. +|..+++
T Consensus 171 d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~p~----------~r~~~~~ 239 (315)
T 4asc_A 171 DPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTG-LTSSAEVYSITDNKWAPFEAFPQ----------ERSSLSL 239 (315)
T ss_dssp ETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSS-EEEEEEEEETTTTEEEEECCCSS----------CCBSCEE
T ss_pred eCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCC-ccceEEEEECCCCeEEECCCCCC----------cccceeE
Confidence 999999999999999999999999999999999987654 57789999999999999998877 8899999
Q ss_pred EEECCEEEEEecC--------------CCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCc
Q 012755 352 AVVNNQLYSADQA--------------TNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGH 411 (457)
Q Consensus 352 ~~~~g~ly~~gg~--------------~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~ 411 (457)
++++++||++||. .+++++||+++++|+.+. |.++. . +++++++++||++...
T Consensus 240 ~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~--~~~r~---~--~~~~~~~~~l~v~~~~ 306 (315)
T 4asc_A 240 VSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL--REIAY---A--AGATFLPVRLNVLRLT 306 (315)
T ss_dssp EEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE--SCSSC---C--SSCEEEEEEECGGGSE
T ss_pred EEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhc--cCCcC---c--cceEEeCCEEEEEEeh
Confidence 9999999999985 256999999999999994 33332 2 2355789999998754
No 10
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=8.2e-36 Score=288.91 Aligned_cols=242 Identities=20% Similarity=0.292 Sum_probs=208.5
Q ss_pred ccCcccccChhhhhhhccCcchhhhhcccc--cccEEEEEecC----------ccEEEEeCCCCcEEeCCCCCCCccccC
Q 012755 129 DYPTLSCLNRKFKSLIASGYLYKLRRQLGM--VEHWVYLACIL----------MPWEAFDPLRQRWMRLPRMQCDECFTS 196 (457)
Q Consensus 129 ~~~~l~~v~k~w~~li~s~~~~~~r~~~~~--~~~~l~~~~~~----------~~~~~ydp~~~~W~~l~~~p~~~~~~~ 196 (457)
++..+....++|..+- .++..|..+.. .++.||++||. ++++.||+.+++|..++++|.+|..+.
T Consensus 40 ~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 116 (308)
T 1zgk_A 40 YLEAYNPSNGTWLRLA---DLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIG 116 (308)
T ss_dssp CEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCE
T ss_pred eEEEEcCCCCeEeECC---CCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccE
Confidence 3445555667788773 33444544443 37899999874 579999999999999999998887665
Q ss_pred CCeeeEEeCCEEEEEceecC---CcEEEEEECCCCcEEeCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeC
Q 012755 197 ADKESLAVGTQLLVFGRELS---GFAIWMYSLIANCWSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNS 273 (457)
Q Consensus 197 ~~~~~~~~~~~lyv~GG~~~---~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~ 273 (457)
+++++++||++||... .+++++||+.+++|+.++++|.+|..|++++++++||++||.++.. ..+++++||+
T Consensus 117 ----~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~ 191 (308)
T 1zgk_A 117 ----VGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTN-RLNSAECYYP 191 (308)
T ss_dssp ----EEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSC-BCCCEEEEET
T ss_pred ----EEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCC-cCceEEEEeC
Confidence 4778999999999754 3689999999999999999999999999999999999999987653 4789999999
Q ss_pred CCCcEEECCCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEE
Q 012755 274 ELGTWETLPDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAV 353 (457)
Q Consensus 274 ~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~ 353 (457)
.+++|+.++++|.+|..+++++++++||++||.+... ..+++++||+++++|+++++++. +|..+++++
T Consensus 192 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~v~~yd~~~~~W~~~~~~p~----------~r~~~~~~~ 260 (308)
T 1zgk_A 192 ERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQD-QLNSVERYDVETETWTFVAPMKH----------RRSALGITV 260 (308)
T ss_dssp TTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSS-BCCCEEEEETTTTEEEECCCCSS----------CCBSCEEEE
T ss_pred CCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCC-ccceEEEEeCCCCcEEECCCCCC----------CccceEEEE
Confidence 9999999999999999999999999999999987543 47889999999999999998877 888999999
Q ss_pred ECCEEEEEecC-----CCeEEEEECCCCcEEEeccCCCccC
Q 012755 354 VNNQLYSADQA-----TNVVKKYNKTNNSWTVVKRLPVRAN 389 (457)
Q Consensus 354 ~~g~ly~~gg~-----~~~v~~Yd~~~~~W~~v~~~p~~~~ 389 (457)
++++||++||. .+++++||+++++|+.++.||.++.
T Consensus 261 ~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~ 301 (308)
T 1zgk_A 261 HQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRS 301 (308)
T ss_dssp ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCB
T ss_pred ECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCCCCCcc
Confidence 99999999983 6789999999999999999998775
No 11
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=8.1e-36 Score=288.42 Aligned_cols=224 Identities=16% Similarity=0.228 Sum_probs=197.5
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDM 284 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~ 284 (457)
.+.||++||....+++++||+.+++|+.++++|.+|..|++++++++||++||.+ ....+++++||+.+++|+.++++
T Consensus 11 ~~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~~~~d~~~~~W~~~~~~ 88 (306)
T 3ii7_A 11 HDYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ--LFPIKRMDCYNVVKDSWYSKLGP 88 (306)
T ss_dssp CCEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBS--SSBCCEEEEEETTTTEEEEEECC
T ss_pred cceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCC--CCCcceEEEEeCCCCeEEECCCC
Confidence 4789999998778899999999999999999999999999999999999999987 45689999999999999999999
Q ss_pred CCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecC
Q 012755 285 NLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQA 364 (457)
Q Consensus 285 p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~ 364 (457)
|.+|..|++++++++||++||.+......+++++||+.+++|+.+++++. +|..+++++++++||++||.
T Consensus 89 p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~----------~r~~~~~~~~~~~iyv~GG~ 158 (306)
T 3ii7_A 89 PTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLT----------QRCSHGMVEANGLIYVCGGS 158 (306)
T ss_dssp SSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSS----------CCBSCEEEEETTEEEEECCE
T ss_pred CccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcC----------CcceeEEEEECCEEEEECCC
Confidence 99999999999999999999987445568899999999999999998887 88999999999999999973
Q ss_pred ---------CCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCCCCCCCC
Q 012755 365 ---------TNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDGNSGEAQ 435 (457)
Q Consensus 365 ---------~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~~w~~~~ 435 (457)
.+++++||+++++|+.++++|.++. +++++.++++|||+||.... ....++++||++++ +
T Consensus 159 ~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-----~~~~~~~~~~i~v~GG~~~~-~~~~~~~~yd~~~~-----~ 227 (306)
T 3ii7_A 159 LGNNVSGRVLNSCEVYDPATETWTELCPMIEARK-----NHGLVFVKDKIFAVGGQNGL-GGLDNVEYYDIKLN-----E 227 (306)
T ss_dssp ESCTTTCEECCCEEEEETTTTEEEEECCCSSCCB-----SCEEEEETTEEEEECCEETT-EEBCCEEEEETTTT-----E
T ss_pred CCCCCcccccceEEEeCCCCCeEEECCCccchhh-----cceEEEECCEEEEEeCCCCC-CCCceEEEeeCCCC-----c
Confidence 6789999999999999999887764 23566789999999998754 34568999999998 8
Q ss_pred eeEeccccccCceEEe
Q 012755 436 WNELAVRERAGAFVYN 451 (457)
Q Consensus 436 W~~l~~~~~~~~~~~~ 451 (457)
|+.++.+|..+..+.+
T Consensus 228 W~~~~~~p~~r~~~~~ 243 (306)
T 3ii7_A 228 WKMVSPMPWKGVTVKC 243 (306)
T ss_dssp EEECCCCSCCBSCCEE
T ss_pred EEECCCCCCCccceeE
Confidence 9999887754444333
No 12
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=5.1e-36 Score=291.63 Aligned_cols=253 Identities=18% Similarity=0.273 Sum_probs=208.8
Q ss_pred ccccChhhhhhhccCcchhhhhcccc--cccEEEEEecC------------ccEEEEeCCCCcEEeCCCCCCCccccCCC
Q 012755 133 LSCLNRKFKSLIASGYLYKLRRQLGM--VEHWVYLACIL------------MPWEAFDPLRQRWMRLPRMQCDECFTSAD 198 (457)
Q Consensus 133 l~~v~k~w~~li~s~~~~~~r~~~~~--~~~~l~~~~~~------------~~~~~ydp~~~~W~~l~~~p~~~~~~~~~ 198 (457)
+-...++|... ..+ ....|..+.. .++.||++||. +.++.||+.+++|..++++|.+|..+.
T Consensus 29 yd~~~~~W~~~-~~~-~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~-- 104 (318)
T 2woz_A 29 YDPMENECYLT-ALA-EQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFG-- 104 (318)
T ss_dssp EETTTTEEEEE-EEC-TTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCE--
T ss_pred ECCCCCceecc-cCC-ccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccc--
Confidence 33445567652 111 1123333332 37889999872 128999999999999999999887654
Q ss_pred eeeEEeCCEEEEEceecC-----CcEEEEEECCCCcEEeCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeC
Q 012755 199 KESLAVGTQLLVFGRELS-----GFAIWMYSLIANCWSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNS 273 (457)
Q Consensus 199 ~~~~~~~~~lyv~GG~~~-----~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~ 273 (457)
+++.+++||++||... .+++++||+.+++|+.++++|.+|..|++++++++||++||.+......+++++||+
T Consensus 105 --~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~ 182 (318)
T 2woz_A 105 --LGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNP 182 (318)
T ss_dssp --EEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEET
T ss_pred --eEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcC
Confidence 4778999999999752 268999999999999999999999999999999999999998765567889999999
Q ss_pred CCCcEEECCCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEE
Q 012755 274 ELGTWETLPDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAV 353 (457)
Q Consensus 274 ~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~ 353 (457)
.+++|+.++++|.+|..|++++++++||++||.+... ..+.+++||+++++|+.++++|. +|..+++++
T Consensus 183 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~p~----------~r~~~~~~~ 251 (318)
T 2woz_A 183 KKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDG-LSASVEAFDLKTNKWEVMTEFPQ----------ERSSISLVS 251 (318)
T ss_dssp TTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTE-EEEEEEEEETTTCCEEECCCCSS----------CCBSCEEEE
T ss_pred CCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCC-ccceEEEEECCCCeEEECCCCCC----------cccceEEEE
Confidence 9999999999999999999999999999999987643 46789999999999999998877 788999999
Q ss_pred ECCEEEEEecC--------------CCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCEEEEEc
Q 012755 354 VNNQLYSADQA--------------TNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIG 409 (457)
Q Consensus 354 ~~g~ly~~gg~--------------~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~G 409 (457)
++++||++||. .+++++||+++++|+++ +|..+.. ++++.++++|||+.
T Consensus 252 ~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~-----~~~~~~~~~iyi~~ 314 (318)
T 2woz_A 252 LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--LKEIRYA-----SGASCLATRLNLFK 314 (318)
T ss_dssp ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--ESCCGGG-----TTCEEEEEEEEGGG
T ss_pred ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--ccccccc-----ccceeeCCEEEEEE
Confidence 99999999984 36899999999999999 5555532 23457799999975
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.4e-35 Score=292.98 Aligned_cols=243 Identities=14% Similarity=0.137 Sum_probs=194.8
Q ss_pred eCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECC--CCcEEeCCCCC-CCccceeEEeeCCEEEEEeee-c
Q 012755 184 RLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLI--ANCWSKCPQMN-LPRCLFGSSSLGEVAIVAGGT-D 259 (457)
Q Consensus 184 ~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~--t~~W~~l~~lp-~~r~~~~~~~~~~~iyv~GG~-~ 259 (457)
.++++|.+|..+. ++++++.||++||... +++++||+. +++|+.+++|| .+|..|++++++++|||+||. +
T Consensus 2 ~l~~lP~~r~~~~----~~~~~~~iyv~GG~~~-~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~ 76 (357)
T 2uvk_A 2 VLPETPVPFKSGT----GAIDNDTVYIGLGSAG-TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGK 76 (357)
T ss_dssp CSCCCSSCCCSCE----EEEETTEEEEECGGGT-TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEE
T ss_pred CCCCCCccccceE----EEEECCEEEEEeCcCC-CeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCC
Confidence 4778888886543 4667999999999764 589999998 59999999999 899999999999999999998 3
Q ss_pred ---CCCCccceEEEEeCCCCcEEECCCCC-CCCcceeEEEECCEEEEEeccCCCC-------------------------
Q 012755 260 ---KNGCILKSAELYNSELGTWETLPDMN-LPRKLCSGFFMDGKFYIIGGMSSPT------------------------- 310 (457)
Q Consensus 260 ---~~~~~~~~v~~yd~~t~~W~~~~~~p-~~r~~~~~~~~~g~iyv~GG~~~~~------------------------- 310 (457)
.....++++++||+.+++|+.+++++ .+|..|++++.+++||++||.+...
T Consensus 77 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (357)
T 2uvk_A 77 NSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHY 156 (357)
T ss_dssp CTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhh
Confidence 22346789999999999999999988 8999999999999999999975421
Q ss_pred --------CCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecC------CCeEEEEEC--C
Q 012755 311 --------DPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQA------TNVVKKYNK--T 374 (457)
Q Consensus 311 --------~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~------~~~v~~Yd~--~ 374 (457)
...+++++||+.+++|+.+++++.+ .+..+++++++++||++||. .++++.||+ +
T Consensus 157 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~---------~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~ 227 (357)
T 2uvk_A 157 FDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWY---------GTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGN 227 (357)
T ss_dssp HSSCGGGGCCCCEEEEEETTTTEEEEEEECSSC---------CCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC--
T ss_pred ccccccccCCcccEEEEeCCCCcEEECCCCCCC---------CcccccEEEECCEEEEEeeecCCCcccCceEEEEecCC
Confidence 1357999999999999999887751 34458899999999999984 678999986 9
Q ss_pred CCcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCC----------------CCceEEEEEeeCCCCCCCCCCeeE
Q 012755 375 NNSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHREL----------------QGEIIVLHSWDPTDGNSGEAQWNE 438 (457)
Q Consensus 375 ~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~----------------~~~~~~v~~y~~~~~~w~~~~W~~ 438 (457)
+++|+.++.+|.++. ..+++++.++++|||+||.... .....++++||++++ +|++
T Consensus 228 ~~~W~~~~~~~~~~~---~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~-----~W~~ 299 (357)
T 2uvk_A 228 NLKWNKLAPVSSPDG---VAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG-----KWDK 299 (357)
T ss_dssp -CEEEECCCSSTTTC---CBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC--------CEE
T ss_pred CCcEEecCCCCCCcc---cccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC-----ceee
Confidence 999999998876654 2334577889999999996432 112467899999987 8999
Q ss_pred eccccccCce
Q 012755 439 LAVRERAGAF 448 (457)
Q Consensus 439 l~~~~~~~~~ 448 (457)
++.+|..+..
T Consensus 300 ~~~~p~~r~~ 309 (357)
T 2uvk_A 300 SGELSQGRAY 309 (357)
T ss_dssp EEECSSCCBS
T ss_pred CCCCCCCccc
Confidence 9887755443
No 14
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=3.1e-34 Score=276.50 Aligned_cols=225 Identities=21% Similarity=0.353 Sum_probs=195.3
Q ss_pred EeCCEEEEEce-ec---CCcEEEEEECCCCcEEeCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCc-
Q 012755 203 AVGTQLLVFGR-EL---SGFAIWMYSLIANCWSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGT- 277 (457)
Q Consensus 203 ~~~~~lyv~GG-~~---~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~- 277 (457)
..++.||++|| .. ..+++++||+.+++|+.++++|.+|..|+++.++++||++||.++. ...+++++||+.+++
T Consensus 12 ~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~-~~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 12 GANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGR-SRLSSVECLDYTADED 90 (301)
T ss_dssp -CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSS-CBCCCEEEEETTCCTT
T ss_pred cCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCC-ccCceEEEEECCCCCC
Confidence 46889999999 43 2468999999999999999999999999999999999999998743 567899999999999
Q ss_pred --EEECCCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEEC
Q 012755 278 --WETLPDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVN 355 (457)
Q Consensus 278 --W~~~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 355 (457)
|+.++++|.+|..|++++++++||++||..... ..+++++||+.+++|+.+++++. +|..+++++++
T Consensus 91 ~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~----------~r~~~~~~~~~ 159 (301)
T 2vpj_A 91 GVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSR-RHTSMERYDPNIDQWSMLGDMQT----------AREGAGLVVAS 159 (301)
T ss_dssp CCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSC-BCCEEEEEETTTTEEEEEEECSS----------CCBSCEEEEET
T ss_pred CeeEECCCCCCCccceeEEEECCEEEEEcccCCCc-ccceEEEEcCCCCeEEECCCCCC----------CcccceEEEEC
Confidence 999999999999999999999999999987543 57899999999999999998877 88999999999
Q ss_pred CEEEEEecC-----CCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCCC
Q 012755 356 NQLYSADQA-----TNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDGN 430 (457)
Q Consensus 356 g~ly~~gg~-----~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~~ 430 (457)
++||++||. .+++++||+++++|+.++.+|.++. +++++.++++|||+||..+.. ...++++||++++
T Consensus 160 ~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~-----~~~~~~~~~~i~v~GG~~~~~-~~~~v~~yd~~~~- 232 (301)
T 2vpj_A 160 GVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRS-----GAGVALLNDHIYVVGGFDGTA-HLSSVEAYNIRTD- 232 (301)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCB-----SCEEEEETTEEEEECCBCSSS-BCCCEEEEETTTT-
T ss_pred CEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccc-----cceEEEECCEEEEEeCCCCCc-ccceEEEEeCCCC-
Confidence 999999984 5789999999999999998887764 234667899999999987543 3568999999997
Q ss_pred CCCCCeeEeccccccCceEE
Q 012755 431 SGEAQWNELAVRERAGAFVY 450 (457)
Q Consensus 431 w~~~~W~~l~~~~~~~~~~~ 450 (457)
+|+.++.+|..+..+.
T Consensus 233 ----~W~~~~~~p~~r~~~~ 248 (301)
T 2vpj_A 233 ----SWTTVTSMTTPRCYVG 248 (301)
T ss_dssp ----EEEEECCCSSCCBSCE
T ss_pred ----cEEECCCCCCccccee
Confidence 8999988765544333
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=8.6e-32 Score=288.15 Aligned_cols=218 Identities=14% Similarity=0.190 Sum_probs=184.6
Q ss_pred eEEeCCEEEEEceec--CCcEEEEEECCCCcEEeCC-C-----CCCCccceeEEee--CCEEEEEeeecCCCCccceEEE
Q 012755 201 SLAVGTQLLVFGREL--SGFAIWMYSLIANCWSKCP-Q-----MNLPRCLFGSSSL--GEVAIVAGGTDKNGCILKSAEL 270 (457)
Q Consensus 201 ~~~~~~~lyv~GG~~--~~~~v~~yd~~t~~W~~l~-~-----lp~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~ 270 (457)
+++.++.||++||.. ..+++++||+.+++|+.++ + +|.+|..|+++++ +++|||+||.+.....++++++
T Consensus 393 ~~~~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~ 472 (695)
T 2zwa_A 393 VDVAGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWI 472 (695)
T ss_dssp EEECSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEE
T ss_pred EEEECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEE
Confidence 355899999999974 3468999999999999987 5 7999999999999 9999999999876557899999
Q ss_pred EeCCCCcEEECCCCCCCCcceeEEEE-CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCC---CCCCCCCCCCCCCCC
Q 012755 271 YNSELGTWETLPDMNLPRKLCSGFFM-DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIEN---MYPSNVGTQSNPAMS 346 (457)
Q Consensus 271 yd~~t~~W~~~~~~p~~r~~~~~~~~-~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~---~~~~~~~~~~~~~~r 346 (457)
||+.+++|+.++++|.+|..|+++++ +++|||+||.+... ++++||+.+++|+.++. +|. +|
T Consensus 473 yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~~W~~~~~~g~~p~----------~r 538 (695)
T 2zwa_A 473 FDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEEIFKDVTPKDEFFQ----------NS 538 (695)
T ss_dssp EETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTTEEEECCCSSGGGG----------SC
T ss_pred EeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCCceEEccCCCCCCC----------cc
Confidence 99999999999999999999999996 99999999987543 89999999999999986 554 78
Q ss_pred CCCEEEEEC---CEEEEEecC-------CCeEEEEECCCCc------EEEeccCCCccCCCCcceEEEEEeC-CEEEEEc
Q 012755 347 SPPLVAVVN---NQLYSADQA-------TNVVKKYNKTNNS------WTVVKRLPVRANSFNGWGLAFKACG-NSLLVIG 409 (457)
Q Consensus 347 ~~~~~~~~~---g~ly~~gg~-------~~~v~~Yd~~~~~------W~~v~~~p~~~~~~~~~~~~~~~~~-g~lyv~G 409 (457)
..+++++++ ++||++||. .+++++||+++++ |+.+..+|...+ .+++++.++ ++|||+|
T Consensus 539 ~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R----~~~~~~~~~~~~iyv~G 614 (695)
T 2zwa_A 539 LVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQR----YGSQIKYITPRKLLIVG 614 (695)
T ss_dssp CBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCC----BSCEEEEEETTEEEEEC
T ss_pred cceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCc----ccceEEEeCCCEEEEEC
Confidence 888888877 899999985 4689999999999 999987652221 234566778 9999999
Q ss_pred CcCCCCC--ceEEEEEeeCCCCCCCCCCeeEecc
Q 012755 410 GHRELQG--EIIVLHSWDPTDGNSGEAQWNELAV 441 (457)
Q Consensus 410 G~~~~~~--~~~~v~~y~~~~~~w~~~~W~~l~~ 441 (457)
|...... ...++++||++++ +|+.++.
T Consensus 615 G~~~~~~~~~~~~v~~yd~~t~-----~W~~~~~ 643 (695)
T 2zwa_A 615 GTSPSGLFDRTNSIISLDPLSE-----TLTSIPI 643 (695)
T ss_dssp CBCSSCCCCTTTSEEEEETTTT-----EEEECCC
T ss_pred CccCCCCCCCCCeEEEEECCCC-----eEEEeec
Confidence 9864432 3568999999998 7887654
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.98 E-value=1.8e-31 Score=285.69 Aligned_cols=236 Identities=13% Similarity=0.156 Sum_probs=192.2
Q ss_pred cccEEEEEec-----CccEEEEeCCCCcEEeCC-C-----CCCCccccCCCeeeEEe--CCEEEEEceecC----CcEEE
Q 012755 159 VEHWVYLACI-----LMPWEAFDPLRQRWMRLP-R-----MQCDECFTSADKESLAV--GTQLLVFGRELS----GFAIW 221 (457)
Q Consensus 159 ~~~~l~~~~~-----~~~~~~ydp~~~~W~~l~-~-----~p~~~~~~~~~~~~~~~--~~~lyv~GG~~~----~~~v~ 221 (457)
.++.||++|| .+++++||+.+++|..++ + +|.+|..|. ++++ ++.||++||... .++++
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs----~~~~~~~~~lyv~GG~~~~~~~~~dv~ 471 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHT----FTTISRNNQLLLIGGRKAPHQGLSDNW 471 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCE----EEEETTTTEEEEECCBSSTTCBCCCCE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceE----EEEEccCCEEEEEcCCCCCCCccccEE
Confidence 3788999987 467999999999999988 5 677776654 4778 999999999753 36899
Q ss_pred EEECCCCcEEeCCCCCCCccceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCC---CCCCCcceeEEEEC
Q 012755 222 MYSLIANCWSKCPQMNLPRCLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPD---MNLPRKLCSGFFMD 297 (457)
Q Consensus 222 ~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~---~p~~r~~~~~~~~~ 297 (457)
+||+.+++|+.++++|.+|..|+++++ +++|||+||.+... ++++||+.+++|+.+++ +|.+|..|++++++
T Consensus 472 ~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~ 547 (695)
T 2zwa_A 472 IFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFD 547 (695)
T ss_dssp EEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEE
T ss_pred EEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCCceEEccCCCCCCCcccceeEEEEe
Confidence 999999999999999999999999996 99999999987653 89999999999999986 88899999988877
Q ss_pred ---CEEEEEeccCCCC-CCCceEEEEECCCCc------eEEcCCCCCCCCCCCCCCCCCCCCEEEEEC-CEEEEEecC--
Q 012755 298 ---GKFYIIGGMSSPT-DPLTCGEEYNLETRT------WKRIENMYPSNVGTQSNPAMSSPPLVAVVN-NQLYSADQA-- 364 (457)
Q Consensus 298 ---g~iyv~GG~~~~~-~~~~~~~~yd~~t~~------W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-g~ly~~gg~-- 364 (457)
++||++||....+ ...+++++||+.+++ |+.+.+++. .+|..+++++++ ++||++||.
T Consensus 548 ~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~---------~~R~~~~~~~~~~~~iyv~GG~~~ 618 (695)
T 2zwa_A 548 PVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPL---------FQRYGSQIKYITPRKLLIVGGTSP 618 (695)
T ss_dssp TTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGG---------GCCBSCEEEEEETTEEEEECCBCS
T ss_pred CCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCC---------CCcccceEEEeCCCEEEEECCccC
Confidence 9999999986543 467899999999999 898877532 178899999999 999999983
Q ss_pred ------CCeEEEEECCCCcEEEeccCCCcc---CCCCcceEEEEEeCC-EEEEEcCcC
Q 012755 365 ------TNVVKKYNKTNNSWTVVKRLPVRA---NSFNGWGLAFKACGN-SLLVIGGHR 412 (457)
Q Consensus 365 ------~~~v~~Yd~~~~~W~~v~~~p~~~---~~~~~~~~~~~~~~g-~lyv~GG~~ 412 (457)
.+++++||+++++|+.+. +|... ..+...+++++.+++ +|||+||..
T Consensus 619 ~~~~~~~~~v~~yd~~t~~W~~~~-~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~ 675 (695)
T 2zwa_A 619 SGLFDRTNSIISLDPLSETLTSIP-ISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGA 675 (695)
T ss_dssp SCCCCTTTSEEEEETTTTEEEECC-CCHHHHHHSCCCCSSCEEECC---CEEEECCEE
T ss_pred CCCCCCCCeEEEEECCCCeEEEee-ccccccCCCCccceeeeEEEeCCCEEEEEeCCc
Confidence 578999999999999653 33211 000122334555555 999999964
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.97 E-value=5.1e-31 Score=281.27 Aligned_cols=295 Identities=14% Similarity=0.131 Sum_probs=213.1
Q ss_pred cChhhhhhhccCcchhhhhccccc--ccEEEEEecC------------ccEEEEeCCCCcEEeCCCCCCCccccCCCeee
Q 012755 136 LNRKFKSLIASGYLYKLRRQLGMV--EHWVYLACIL------------MPWEAFDPLRQRWMRLPRMQCDECFTSADKES 201 (457)
Q Consensus 136 v~k~w~~li~s~~~~~~r~~~~~~--~~~l~~~~~~------------~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~ 201 (457)
...+|..+...|.. ....... ++.||++++. ..++.||+.+++|..++.+|.++..+++ ..+
T Consensus 174 ~~~~W~~~~~~P~~---~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~-~~~ 249 (656)
T 1k3i_A 174 GLGRWGPTIDLPIV---PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCP-GIS 249 (656)
T ss_dssp TSCEEEEEEECSSC---CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSC-EEE
T ss_pred CCCeeeeeccCCCC---ceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccc-ccc
Confidence 34567666554441 1111222 7789998752 2689999999999999988877765543 123
Q ss_pred EEeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCcEEE
Q 012755 202 LAVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGTWET 280 (457)
Q Consensus 202 ~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~ 280 (457)
+..+++||++||.... ++++||+.+++|+++++||.+|..|+++++ +++|||+||........+++++||+.+++|+.
T Consensus 250 ~~~~g~lyv~GG~~~~-~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~ 328 (656)
T 1k3i_A 250 MDGNGQIVVTGGNDAK-KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTS 328 (656)
T ss_dssp ECTTSCEEEECSSSTT-CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEE
T ss_pred CCCCCCEEEeCCCCCC-ceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCccee
Confidence 3468999999997543 799999999999999999999999999998 99999999954434567899999999999999
Q ss_pred C-----CCCCCCCcceeEEEECCEEEEEeccCCCC---CCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEE
Q 012755 281 L-----PDMNLPRKLCSGFFMDGKFYIIGGMSSPT---DPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVA 352 (457)
Q Consensus 281 ~-----~~~p~~r~~~~~~~~~g~iyv~GG~~~~~---~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~ 352 (457)
+ .+|+..+.. +++..++++|++||.++.. ...+.++.||++++.|......... +.+. +..+..+.++
T Consensus 329 ~~~~~~~p~~~~~~~-~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~--~~~~-~~~~~~~~av 404 (656)
T 1k3i_A 329 LPNAKVNPMLTADKQ-GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQS--NRGV-APDAMCGNAV 404 (656)
T ss_dssp ETTSCSGGGCCCCTT-GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEE--TTEE-CCCCBTCEEE
T ss_pred CCCcccccccccccc-ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCcccc--cccc-CCCCCCCceE
Confidence 7 345555543 4556799999999986531 2367899999999998754322110 0000 0022334444
Q ss_pred E---ECCEEEEEecC--------CC---eEEEEECCCCcEEEec--cCCCccCCCCcceEEEEEe-CCEEEEEcCcCCC-
Q 012755 353 V---VNNQLYSADQA--------TN---VVKKYNKTNNSWTVVK--RLPVRANSFNGWGLAFKAC-GNSLLVIGGHREL- 414 (457)
Q Consensus 353 ~---~~g~ly~~gg~--------~~---~v~~Yd~~~~~W~~v~--~~p~~~~~~~~~~~~~~~~-~g~lyv~GG~~~~- 414 (457)
. .+++||++||. .+ .+++||+++++|+.+. .||.++.. ..++.+ +|+|||+||....
T Consensus 405 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~-----~~~~~l~~g~i~v~GG~~~~~ 479 (656)
T 1k3i_A 405 MYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTF-----HTSVVLPDGSTFITGGQRRGI 479 (656)
T ss_dssp EEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBS-----CEEEECTTSCEEEECCBSBCC
T ss_pred eccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCccc-----CCeEECCCCCEEEECCcccCc
Confidence 3 48999999984 23 7899999999999987 78877642 234455 9999999997532
Q ss_pred ----CCceEEEEEeeCCCCCCCCCCeeEeccccccCceE
Q 012755 415 ----QGEIIVLHSWDPTDGNSGEAQWNELAVRERAGAFV 449 (457)
Q Consensus 415 ----~~~~~~v~~y~~~~~~w~~~~W~~l~~~~~~~~~~ 449 (457)
.....++++|||+++ +|+.++.++..+..+
T Consensus 480 ~~~~~~~~~~v~~ydp~t~-----~W~~~~~~~~~R~~h 513 (656)
T 1k3i_A 480 PFEDSTPVFTPEIYVPEQD-----TFYKQNPNSIVRVYH 513 (656)
T ss_dssp TTCCCSBCCCCEEEEGGGT-----EEEECCCCSSCCCTT
T ss_pred CcCCCCcccceEEEcCCCC-----ceeecCCCCCccccc
Confidence 123568999999987 899998766444433
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.96 E-value=9.6e-29 Score=263.65 Aligned_cols=271 Identities=18% Similarity=0.190 Sum_probs=194.0
Q ss_pred ccccEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEe--CCEEEEEceecCC---------cEEEEEECC
Q 012755 158 MVEHWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAV--GTQLLVFGRELSG---------FAIWMYSLI 226 (457)
Q Consensus 158 ~~~~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~--~~~lyv~GG~~~~---------~~v~~yd~~ 226 (457)
..|-.+|. ...+.+|||.+++|..++++|. ..++ .++. +++||++||.... ..+++||+.
T Consensus 157 i~E~~v~~---~~~~~~~dp~~~~W~~~~~~P~--~~~~----~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~ 227 (656)
T 1k3i_A 157 IAEINVFQ---ASSYTAPQPGLGRWGPTIDLPI--VPAA----AAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPS 227 (656)
T ss_dssp ESEEEEEE---CSCCCCCCTTSCEEEEEEECSS--CCSE----EEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTT
T ss_pred EEEEEEee---ccccccCCCCCCeeeeeccCCC--Ccee----EEEEecCCEEEEEecccccccccCCCCeEEEEEEeCC
Confidence 34555554 3458899999999999888775 2222 3444 9999999986431 379999999
Q ss_pred CCcEEeCCCCCCCcccee--EE-eeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE-CCEEEE
Q 012755 227 ANCWSKCPQMNLPRCLFG--SS-SLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM-DGKFYI 302 (457)
Q Consensus 227 t~~W~~l~~lp~~r~~~~--~~-~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g~iyv 302 (457)
+++|+.+++||.+|..++ ++ ..+++||++||.+. .++++||+.+++|+.+++|+.+|..|+++++ +|+|||
T Consensus 228 t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~-----~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv 302 (656)
T 1k3i_A 228 TGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA-----KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFT 302 (656)
T ss_dssp TCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSST-----TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEE
T ss_pred CCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCC-----CceEEecCcCCceeECCCCCccccccceEEecCCeEEE
Confidence 999999999988887664 33 35899999999764 2799999999999999999999999999999 999999
Q ss_pred EeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecC---------CCeEEEEEC
Q 012755 303 IGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQA---------TNVVKKYNK 373 (457)
Q Consensus 303 ~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~---------~~~v~~Yd~ 373 (457)
+||........+++++||+.+++|+.++.....++ +..+. .++++.++++|++||. .+.+++||+
T Consensus 303 ~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~-----~~~~~-~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~ 376 (656)
T 1k3i_A 303 IGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPM-----LTADK-QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYT 376 (656)
T ss_dssp ECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGG-----CCCCT-TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEEC
T ss_pred EeCcccCCcccccceEeCCCCCcceeCCCcccccc-----ccccc-cceeecCCceEEEECCCCcEEEecCccceeeeec
Confidence 99954434467889999999999999853221000 11332 2455578999999853 567899999
Q ss_pred CCCcEEEeccCCCcc---CCCCcceEEEE--EeCCEEEEEcCcCCCC--C---ceEEEEEeeCCCCCCCCCCeeEec--c
Q 012755 374 TNNSWTVVKRLPVRA---NSFNGWGLAFK--ACGNSLLVIGGHRELQ--G---EIIVLHSWDPTDGNSGEAQWNELA--V 441 (457)
Q Consensus 374 ~~~~W~~v~~~p~~~---~~~~~~~~~~~--~~~g~lyv~GG~~~~~--~---~~~~v~~y~~~~~~w~~~~W~~l~--~ 441 (457)
+++.|......+... ......+.+++ ..+++|||+||..... . ....+++||++++ +|..+. .
T Consensus 377 ~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~-----~W~~~~~~~ 451 (656)
T 1k3i_A 377 SGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS-----PNTVFASNG 451 (656)
T ss_dssp STTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSC-----CEEEECTTC
T ss_pred CCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC-----CeeEEccCC
Confidence 999987643322110 00002233332 3589999999975321 1 2237899999987 799886 6
Q ss_pred ccccCceEEeee
Q 012755 442 RERAGAFVYNCA 453 (457)
Q Consensus 442 ~~~~~~~~~~~~ 453 (457)
++..+..+.+++
T Consensus 452 mp~~R~~~~~~~ 463 (656)
T 1k3i_A 452 LYFARTFHTSVV 463 (656)
T ss_dssp CSSCCBSCEEEE
T ss_pred CCCCcccCCeEE
Confidence 664544443333
No 19
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.00 E-value=6.8e-08 Score=96.98 Aligned_cols=275 Identities=12% Similarity=0.138 Sum_probs=152.8
Q ss_pred CCCCCCCCcHHHHhhhceeccccccCcccccChhhhhhhccCcchhhhh-------------------------------
Q 012755 106 DDSFLPGLHDDATLDILAWSSRSDYPTLSCLNRKFKSLIASGYLYKLRR------------------------------- 154 (457)
Q Consensus 106 ~~~~~~~LPddl~~~iLarlp~~~~~~l~~v~k~w~~li~s~~~~~~r~------------------------------- 154 (457)
....+..||+|++..||++|+.+++.++..|||+|+.++.++.+++..-
T Consensus 15 ~~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~~~~ 94 (445)
T 2ovr_B 15 QRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYI 94 (445)
T ss_dssp CCSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCCCCC--CCSSCCCCCHHHHHHH
T ss_pred cCChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccccccceecCCCccCCcHHHHHh
Confidence 4456889999999999999999999999999999999887765433100
Q ss_pred ------------c-------cccc----------ccEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeC
Q 012755 155 ------------Q-------LGMV----------EHWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVG 205 (457)
Q Consensus 155 ------------~-------~~~~----------~~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~ 205 (457)
. .+.. +..++..+....+..||..+.+-.. .+.. +...-..+...
T Consensus 95 ~~~~~~~~w~~~~~~~~~~l~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~--~~~~----h~~~v~~~~~~ 168 (445)
T 2ovr_B 95 RQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLR--TLVG----HTGGVWSSQMR 168 (445)
T ss_dssp HHHHHHHHHHHSCCCCCEEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEE--ECCC----CSSCEEEEEEE
T ss_pred hhhhhhhcccCCCcceeEEecccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEE--EEcC----CCCCEEEEEec
Confidence 0 0000 1122222234566777766554221 1111 11111123334
Q ss_pred CEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCC
Q 012755 206 TQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMN 285 (457)
Q Consensus 206 ~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p 285 (457)
+.+++.|+.+ ..+.+||..+++-... +............++..++.|+.+ ..+.+||..+++-... +.
T Consensus 169 ~~~l~s~~~d--g~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~l~s~s~d------g~i~~wd~~~~~~~~~--~~ 236 (445)
T 2ovr_B 169 DNIIISGSTD--RTLKVWNAETGECIHT--LYGHTSTVRCMHLHEKRVVSGSRD------ATLRVWDIETGQCLHV--LM 236 (445)
T ss_dssp TTEEEEEETT--SCEEEEETTTTEEEEE--ECCCSSCEEEEEEETTEEEEEETT------SEEEEEESSSCCEEEE--EE
T ss_pred CCEEEEEeCC--CeEEEEECCcCcEEEE--ECCCCCcEEEEEecCCEEEEEeCC------CEEEEEECCCCcEEEE--Ec
Confidence 4555666543 3588899888754322 111111112223345556666643 4688899887763221 11
Q ss_pred CCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecCC
Q 012755 286 LPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQAT 365 (457)
Q Consensus 286 ~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~~ 365 (457)
........+..++..++.|+.+ ..+..||+.+.+-.. .+.. .......+..++..++.|+..
T Consensus 237 ~~~~~v~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~--~~~~----------~~~~v~~~~~~~~~l~~~~~d 298 (445)
T 2ovr_B 237 GHVAAVRCVQYDGRRVVSGAYD------FMVKVWDPETETCLH--TLQG----------HTNRVYSLQFDGIHVVSGSLD 298 (445)
T ss_dssp CCSSCEEEEEECSSCEEEEETT------SCEEEEEGGGTEEEE--EECC----------CSSCEEEEEECSSEEEEEETT
T ss_pred CCcccEEEEEECCCEEEEEcCC------CEEEEEECCCCcEeE--EecC----------CCCceEEEEECCCEEEEEeCC
Confidence 1112223344477777777643 357889987764322 1111 122233444588888888888
Q ss_pred CeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 366 NVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 366 ~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
+.+..||..+.+-... +.... .. ......++.+++.|+.++ .+.+||..+.
T Consensus 299 ~~i~i~d~~~~~~~~~--~~~~~----~~-v~~~~~~~~~l~~~~~dg------~i~vwd~~~~ 349 (445)
T 2ovr_B 299 TSIRVWDVETGNCIHT--LTGHQ----SL-TSGMELKDNILVSGNADS------TVKIWDIKTG 349 (445)
T ss_dssp SCEEEEETTTCCEEEE--ECCCC----SC-EEEEEEETTEEEEEETTS------CEEEEETTTC
T ss_pred CeEEEEECCCCCEEEE--EcCCc----cc-EEEEEEeCCEEEEEeCCC------eEEEEECCCC
Confidence 8999999987653221 21111 11 222334566666776653 4788888763
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.85 E-value=8.3e-08 Score=96.18 Aligned_cols=276 Identities=12% Similarity=0.099 Sum_probs=153.8
Q ss_pred CCCCCCCCcHH----HHhhhceeccccccCcccccChhhhhhhccCcchhhh---h------------------------
Q 012755 106 DDSFLPGLHDD----ATLDILAWSSRSDYPTLSCLNRKFKSLIASGYLYKLR---R------------------------ 154 (457)
Q Consensus 106 ~~~~~~~LPdd----l~~~iLarlp~~~~~~l~~v~k~w~~li~s~~~~~~r---~------------------------ 154 (457)
...++..||+| |+..||++|+..++.+++.|||+|+.++.++.+++.. .
T Consensus 7 ~~d~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 86 (435)
T 1p22_A 7 QRDFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNK 86 (435)
T ss_dssp CCCHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHSSSGGGGCC---
T ss_pred hcChHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCcchhhhhhhhccchhhhhhccC
Confidence 44567789999 9999999999999999999999999998876654310 0
Q ss_pred ------------------------------cccc-----------c----------ccEEEEEecCccEEEEeCCCCcEE
Q 012755 155 ------------------------------QLGM-----------V----------EHWVYLACILMPWEAFDPLRQRWM 183 (457)
Q Consensus 155 ------------------------------~~~~-----------~----------~~~l~~~~~~~~~~~ydp~~~~W~ 183 (457)
..+. . +..+...+....+..||..+.+-.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~ 166 (435)
T 1p22_A 87 PPDGNAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECK 166 (435)
T ss_dssp ------CCSHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEECCCSSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEE
T ss_pred CCCCCCCchhhHHhhhhhhhcchhHHHhhhccCCccceEEecccCCCCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEE
Confidence 0000 0 012222233456777776655432
Q ss_pred eCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEeeCCEEEEEeeecCCCC
Q 012755 184 RLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGC 263 (457)
Q Consensus 184 ~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~ 263 (457)
.. +. .+...-..+..++.+++.|+.+ ..+.+||..+++-... +............++..++.|+.+
T Consensus 167 ~~--~~----~h~~~v~~l~~~~~~l~sg~~d--g~i~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~s~s~d---- 232 (435)
T 1p22_A 167 RI--LT----GHTGSVLCLQYDERVIITGSSD--STVRVWDVNTGEMLNT--LIHHCEAVLHLRFNNGMMVTCSKD---- 232 (435)
T ss_dssp EE--EC----CCSSCEEEEECCSSEEEEEETT--SCEEEEESSSCCEEEE--ECCCCSCEEEEECCTTEEEEEETT----
T ss_pred EE--Ec----CCCCcEEEEEECCCEEEEEcCC--CeEEEEECCCCcEEEE--EcCCCCcEEEEEEcCCEEEEeeCC----
Confidence 11 11 1111112334467777777654 3588899888764322 111111122233345566666643
Q ss_pred ccceEEEEeCCCCcEEEC-CCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCC
Q 012755 264 ILKSAELYNSELGTWETL-PDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSN 342 (457)
Q Consensus 264 ~~~~v~~yd~~t~~W~~~-~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~ 342 (457)
..+.+||..+..-... ..+.........+..++...+.|+.+ ..+.+||..+.+-... +..
T Consensus 233 --g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d------g~i~vwd~~~~~~~~~--~~~-------- 294 (435)
T 1p22_A 233 --RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD------RTIKVWNTSTCEFVRT--LNG-------- 294 (435)
T ss_dssp --SCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETT------SEEEEEETTTCCEEEE--EEC--------
T ss_pred --CcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCC------CeEEEEECCcCcEEEE--EcC--------
Confidence 4678888877642110 01111122222333466666666542 4678899987653322 111
Q ss_pred CCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEE
Q 012755 343 PAMSSPPLVAVVNNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLH 422 (457)
Q Consensus 343 ~~~r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~ 422 (457)
.......+..++.+++.|+..+.|..||..+++-.. .+.... . .+..+..++..++.|+.++ .+.
T Consensus 295 --~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~--~~~~h~----~-~v~~~~~~~~~l~sg~~dg------~i~ 359 (435)
T 1p22_A 295 --HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR--VLEGHE----E-LVRCIRFDNKRIVSGAYDG------KIK 359 (435)
T ss_dssp --CSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEE--EECCCS----S-CEEEEECCSSEEEEEETTS------CEE
T ss_pred --CCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEE--EEeCCc----C-cEEEEEecCCEEEEEeCCC------cEE
Confidence 112223445577778888888899999998764322 222111 1 1233455788888887764 477
Q ss_pred EeeCCC
Q 012755 423 SWDPTD 428 (457)
Q Consensus 423 ~y~~~~ 428 (457)
+||...
T Consensus 360 vwd~~~ 365 (435)
T 1p22_A 360 VWDLVA 365 (435)
T ss_dssp EEEHHH
T ss_pred EEECCC
Confidence 777644
No 21
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.81 E-value=1.8e-07 Score=94.19 Aligned_cols=278 Identities=10% Similarity=0.102 Sum_probs=145.9
Q ss_pred CCCCCCCCcHHHHhhhceeccccccCcccccChhhhhhhcc-Ccchhhhh------------------------------
Q 012755 106 DDSFLPGLHDDATLDILAWSSRSDYPTLSCLNRKFKSLIAS-GYLYKLRR------------------------------ 154 (457)
Q Consensus 106 ~~~~~~~LPddl~~~iLarlp~~~~~~l~~v~k~w~~li~s-~~~~~~r~------------------------------ 154 (457)
....+..||+|++++||++|+..++.+++.|||+|+.++.+ +.+++...
T Consensus 11 ~~d~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (464)
T 3v7d_B 11 KRDLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKLLISENFVSPKGFNSLNLKLSQKYPKLSQQDR 90 (464)
T ss_dssp CCCHHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHHHHHTTSCCTTTHHHHHHHHHHHCTTSCHHHH
T ss_pred ccCChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccccccccchhhhhhhhhccCCCcccchh
Confidence 34567789999999999999999999999999999999987 54322100
Q ss_pred --------------------------ccccc----------ccEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCC
Q 012755 155 --------------------------QLGMV----------EHWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSAD 198 (457)
Q Consensus 155 --------------------------~~~~~----------~~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~ 198 (457)
..+.. +..++..+....+..||..+.+-.. .+. .|...
T Consensus 91 ~~~~~~~~~~~~~~w~~~~~~~~~~~l~~h~~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~--~~~----~h~~~ 164 (464)
T 3v7d_B 91 LRLSFLENIFILKNWYNPKFVPQRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLL--QLS----GHDGG 164 (464)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCCEEEEEECCSSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEE--EEC----CCSSC
T ss_pred hHHHHHHhhhhHhhhcCCCcCcceEEEcCCCCCcEEEEEECCCEEEEEcCCCcEEEEECCCCcEEE--EEe----CCCcC
Confidence 00000 1122222224567777765553211 111 11111
Q ss_pred -eeeEEeCCEEEEEceecCCcEEEEEECCCCcEEeC-CCCCCCccceeEEee---CCEEEEEeeecCCCCccceEEEEeC
Q 012755 199 -KESLAVGTQLLVFGRELSGFAIWMYSLIANCWSKC-PQMNLPRCLFGSSSL---GEVAIVAGGTDKNGCILKSAELYNS 273 (457)
Q Consensus 199 -~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l-~~lp~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~v~~yd~ 273 (457)
..+....+.+++.|+.+ ..+.+||..+++-... .....+ -.++... ++..++.|+.+ ..+.++|.
T Consensus 165 V~~l~~~~~~~l~s~s~d--g~i~vwd~~~~~~~~~~~~h~~~--v~~l~~~~~~~~~~l~s~s~d------~~i~vwd~ 234 (464)
T 3v7d_B 165 VWALKYAHGGILVSGSTD--RTVRVWDIKKGCCTHVFEGHNST--VRCLDIVEYKNIKYIVTGSRD------NTLHVWKL 234 (464)
T ss_dssp EEEEEECSTTEEEEEETT--SCEEEEETTTTEEEEEECCCSSC--EEEEEEEESSSCEEEEEEETT------SCEEEEEC
T ss_pred EEEEEEcCCCEEEEEeCC--CCEEEEECCCCcEEEEECCCCCc--cEEEEEecCCCCCEEEEEcCC------CcEEEeeC
Confidence 11122223355666543 3588899988764332 111111 1122222 45666666644 35777887
Q ss_pred CCCcEEECC---------------------CCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCC
Q 012755 274 ELGTWETLP---------------------DMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENM 332 (457)
Q Consensus 274 ~t~~W~~~~---------------------~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~ 332 (457)
.+..-.... .+............++.+.+.|+.+ ..+..||..+.+-...-..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~ 308 (464)
T 3v7d_B 235 PKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYD------NTLIVWDVAQMKCLYILSG 308 (464)
T ss_dssp CCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETT------SCEEEEETTTTEEEEEECC
T ss_pred CCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCC------CeEEEEECCCCcEEEEecC
Confidence 765421100 0000111112223445555666543 3578899887653322111
Q ss_pred CCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCc
Q 012755 333 YPSNVGTQSNPAMSSPPLVAVV-NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGH 411 (457)
Q Consensus 333 ~~~~~~~~~~~~~r~~~~~~~~-~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~ 411 (457)
.. .....++.. ++..++.|+..+.+..||..+.+-. ..+.... . .+..+..++..++.|+.
T Consensus 309 ~~-----------~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~--~~~~~h~----~-~v~~~~~~~~~l~s~s~ 370 (464)
T 3v7d_B 309 HT-----------DRIYSTIYDHERKRCISASMDTTIRIWDLENGELM--YTLQGHT----A-LVGLLRLSDKFLVSAAA 370 (464)
T ss_dssp CS-----------SCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEE--EEECCCS----S-CEEEEEECSSEEEEEET
T ss_pred CC-----------CCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEE--EEEeCCC----C-cEEEEEEcCCEEEEEeC
Confidence 11 111122222 5667777878889999999876532 2222111 1 12333456667777766
Q ss_pred CCCCCceEEEEEeeCCCC
Q 012755 412 RELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 412 ~~~~~~~~~v~~y~~~~~ 429 (457)
++ .+.+||..+.
T Consensus 371 dg------~v~vwd~~~~ 382 (464)
T 3v7d_B 371 DG------SIRGWDANDY 382 (464)
T ss_dssp TS------EEEEEETTTC
T ss_pred CC------cEEEEECCCC
Confidence 53 5778888763
No 22
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.39 E-value=6.3e-08 Score=66.69 Aligned_cols=45 Identities=16% Similarity=0.227 Sum_probs=39.1
Q ss_pred CCCCCCCcHHHHhhhceeccccccCcccccChhhhhhhccCcchh
Q 012755 107 DSFLPGLHDDATLDILAWSSRSDYPTLSCLNRKFKSLIASGYLYK 151 (457)
Q Consensus 107 ~~~~~~LPddl~~~iLarlp~~~~~~l~~v~k~w~~li~s~~~~~ 151 (457)
...+..||+|++.+||++||..++.+++.|||+|+.++.++.+++
T Consensus 6 ~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 6 GVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp ---CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred CCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 345889999999999999999999999999999999999887754
No 23
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.34 E-value=0.00014 Score=69.80 Aligned_cols=235 Identities=11% Similarity=-0.009 Sum_probs=130.6
Q ss_pred ccEEEEEec-CccEEEEeCCCCcE-EeCCCCCCCccccCCCeeeEE-eCCEEEEEceecCCcEEEEEECCCCcEEe-CCC
Q 012755 160 EHWVYLACI-LMPWEAFDPLRQRW-MRLPRMQCDECFTSADKESLA-VGTQLLVFGRELSGFAIWMYSLIANCWSK-CPQ 235 (457)
Q Consensus 160 ~~~l~~~~~-~~~~~~ydp~~~~W-~~l~~~p~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~v~~yd~~t~~W~~-l~~ 235 (457)
+..+|+... .+.+.++|+.+.+- ..++....|+ .++. .++.+|+... ....+.++|+.+++-.. ++.
T Consensus 53 ~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~-------~i~~~~~g~lyv~~~--~~~~v~~iD~~t~~~~~~i~~ 123 (328)
T 3dsm_A 53 DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPR-------YIHFLSDEKAYVTQI--WDYRIFIINPKTYEITGYIEC 123 (328)
T ss_dssp TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEE-------EEEEEETTEEEEEEB--SCSEEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCc-------EEEEeCCCeEEEEEC--CCCeEEEEECCCCeEEEEEEc
Confidence 566777654 46788999988765 3343222221 2333 6789998763 24689999999987542 221
Q ss_pred CC-C--CccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEE-CCCCCCCCcceeEEEECCEEEEEeccCCCCC
Q 012755 236 MN-L--PRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWET-LPDMNLPRKLCSGFFMDGKFYIIGGMSSPTD 311 (457)
Q Consensus 236 lp-~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~-~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~ 311 (457)
-. . ......++..++++||..- . ....+.++|+.+++... ++....+. .....-+|++|+.........
T Consensus 124 g~~~~~~~~p~~i~~~~~~lyv~~~-~----~~~~v~viD~~t~~~~~~i~~g~~p~--~i~~~~dG~l~v~~~~~~~~~ 196 (328)
T 3dsm_A 124 PDMDMESGSTEQMVQYGKYVYVNCW-S----YQNRILKIDTETDKVVDELTIGIQPT--SLVMDKYNKMWTITDGGYEGS 196 (328)
T ss_dssp TTCCTTTCBCCCEEEETTEEEEEEC-T----TCCEEEEEETTTTEEEEEEECSSCBC--CCEECTTSEEEEEBCCBCTTC
T ss_pred CCccccCCCcceEEEECCEEEEEcC-C----CCCEEEEEECCCCeEEEEEEcCCCcc--ceEEcCCCCEEEEECCCccCC
Confidence 11 0 0022344557899999842 0 13579999999988543 22111111 112223689988753221110
Q ss_pred C----CceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEeccCC
Q 012755 312 P----LTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSWTVVKRLP 385 (457)
Q Consensus 312 ~----~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p 385 (457)
. ...+.++|+++++....-..+. ......++.. ++.||+..+ .++++|+++++.......+
T Consensus 197 ~~~~~~~~v~~id~~t~~v~~~~~~~~----------g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~~~~~~ 263 (328)
T 3dsm_A 197 PYGYEAPSLYRIDAETFTVEKQFKFKL----------GDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPVRPFLE 263 (328)
T ss_dssp SSCBCCCEEEEEETTTTEEEEEEECCT----------TCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCSSCSBC
T ss_pred ccccCCceEEEEECCCCeEEEEEecCC----------CCCceeEEEecCCCEEEEEcc---EEEEEECCCCceeeeeeec
Confidence 1 3679999999987653322222 1122334444 467888764 8999999987653211122
Q ss_pred CccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCC
Q 012755 386 VRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPT 427 (457)
Q Consensus 386 ~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~ 427 (457)
..... -.++++...+++|||....+- .....+.+||++
T Consensus 264 ~~~~~--p~gi~vdp~~g~lyva~~~~y--~~~~~V~v~d~~ 301 (328)
T 3dsm_A 264 FRDTK--YYGLTVNPNNGEVYVADAIDY--QQQGIVYRYSPQ 301 (328)
T ss_dssp CCSSC--EEEEEECTTTCCEEEEECTTS--SSEEEEEEECTT
T ss_pred CCCCc--eEEEEEcCCCCeEEEEccccc--ccCCEEEEECCC
Confidence 11010 112222114789999862210 123579999997
No 24
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.26 E-value=0.001 Score=64.66 Aligned_cols=223 Identities=16% Similarity=0.135 Sum_probs=133.0
Q ss_pred cccEEEEEecCccEEEEeCCCC--cEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCc--EEeCC
Q 012755 159 VEHWVYLACILMPWEAFDPLRQ--RWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANC--WSKCP 234 (457)
Q Consensus 159 ~~~~l~~~~~~~~~~~ydp~~~--~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~--W~~l~ 234 (457)
.++.+|+......+.++|+.+. .|..-..-. ... ..+..++.+|+... ...++.+|+.+++ |+.-.
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~----~~~---~p~~~~~~v~v~~~---~g~l~~~d~~tG~~~W~~~~ 171 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGE----ALS---RPVVSDGLVLIHTS---NGQLQALNEADGAVKWTVNL 171 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSC----CCS---CCEEETTEEEEECT---TSEEEEEETTTCCEEEEEEC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCc----eEc---CCEEECCEEEEEcC---CCeEEEEECCCCcEEEEEeC
Confidence 3677888776778999999866 475422111 011 12556888887542 3479999998875 87643
Q ss_pred CCCC--CccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCc--EEECCCCCCCC--------cceeEEEECCEEEE
Q 012755 235 QMNL--PRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGT--WETLPDMNLPR--------KLCSGFFMDGKFYI 302 (457)
Q Consensus 235 ~lp~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~~r--------~~~~~~~~~g~iyv 302 (457)
..+. .+...+.+..++.+|+. .. ...+..||+.+++ |+.-...+... .....++.++.+|+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~v~~g-~~------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~ 244 (376)
T 3q7m_A 172 DMPSLSLRGESAPTTAFGAAVVG-GD------NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFA 244 (376)
T ss_dssp CC-----CCCCCCEEETTEEEEC-CT------TTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEE
T ss_pred CCCceeecCCCCcEEECCEEEEE-cC------CCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEE
Confidence 2211 11222334557777763 21 2468899998876 87643322111 12334566899998
Q ss_pred EeccCCCCCCCceEEEEECCCCc--eEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCc--E
Q 012755 303 IGGMSSPTDPLTCGEEYNLETRT--WKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQATNVVKKYNKTNNS--W 378 (457)
Q Consensus 303 ~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~~--W 378 (457)
.+. ...+.++|+++++ |+.-.. . ....++.++.||+.. ..+.+..||+++++ |
T Consensus 245 ~~~-------~g~l~~~d~~tG~~~w~~~~~--~-------------~~~~~~~~~~l~~~~-~~g~l~~~d~~tG~~~w 301 (376)
T 3q7m_A 245 LAY-------NGNLTALDLRSGQIMWKRELG--S-------------VNDFIVDGNRIYLVD-QNDRVMALTIDGGVTLW 301 (376)
T ss_dssp ECT-------TSCEEEEETTTCCEEEEECCC--C-------------EEEEEEETTEEEEEE-TTCCEEEEETTTCCEEE
T ss_pred Eec-------CcEEEEEECCCCcEEeeccCC--C-------------CCCceEECCEEEEEc-CCCeEEEEECCCCcEEE
Confidence 641 2357889998774 764311 1 123556789999876 35689999998774 7
Q ss_pred EEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCCCCCCCCeeE
Q 012755 379 TVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDGNSGEAQWNE 438 (457)
Q Consensus 379 ~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~~w~~~~W~~ 438 (457)
+.-. ++.... ...+..++.||+... .+ .++++|+++ ++..|+.
T Consensus 302 ~~~~-~~~~~~------~~~~~~~~~l~v~~~-~g------~l~~~d~~t---G~~~~~~ 344 (376)
T 3q7m_A 302 TQSD-LLHRLL------TSPVLYNGNLVVGDS-EG------YLHWINVED---GRFVAQQ 344 (376)
T ss_dssp EECT-TTTSCC------CCCEEETTEEEEECT-TS------EEEEEETTT---CCEEEEE
T ss_pred eecc-cCCCcc------cCCEEECCEEEEEeC-CC------eEEEEECCC---CcEEEEE
Confidence 6531 211111 123356888888643 21 588999988 5667763
No 25
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.25 E-value=0.0012 Score=64.15 Aligned_cols=237 Identities=12% Similarity=0.096 Sum_probs=134.8
Q ss_pred cccEEEEEecCccEEEEeCCCC--cEEeCCCCCCC--c-cccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCc--EE
Q 012755 159 VEHWVYLACILMPWEAFDPLRQ--RWMRLPRMQCD--E-CFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANC--WS 231 (457)
Q Consensus 159 ~~~~l~~~~~~~~~~~ydp~~~--~W~~l~~~p~~--~-~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~--W~ 231 (457)
.++.+|+......+.+||+.+. .|..-...... . .........+..++.||+... ...++.+|+.+++ |+
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---~g~l~a~d~~tG~~~W~ 128 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE---KAQVYALNTSDGTVAWQ 128 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET---TSEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC---CCEEEEEECCCCCEEEE
Confidence 3778888776678999999765 57543221100 0 001111224556888888542 2479999998775 76
Q ss_pred eCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCc--EEECCCCCC--CCcceeEEEECCEEEEEeccC
Q 012755 232 KCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGT--WETLPDMNL--PRKLCSGFFMDGKFYIIGGMS 307 (457)
Q Consensus 232 ~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~--~r~~~~~~~~~g~iyv~GG~~ 307 (457)
.-.+-. .....+..++.+|+... ...+..||+.+++ |+.-...+. .+.....++.++.+|+-.
T Consensus 129 ~~~~~~---~~~~p~~~~~~v~v~~~-------~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~--- 195 (376)
T 3q7m_A 129 TKVAGE---ALSRPVVSDGLVLIHTS-------NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGG--- 195 (376)
T ss_dssp EECSSC---CCSCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECC---
T ss_pred EeCCCc---eEcCCEEECCEEEEEcC-------CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEc---
Confidence 532211 11223455788887532 2478999998886 876543221 122234456688888731
Q ss_pred CCCCCCceEEEEECCCCc--eEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCC--cEEEecc
Q 012755 308 SPTDPLTCGEEYNLETRT--WKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQATNVVKKYNKTNN--SWTVVKR 383 (457)
Q Consensus 308 ~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~--~W~~v~~ 383 (457)
....+..||+++++ |+.-...+... .............+..++.+|+.+ ..+.+..+|++++ .|+.-.
T Consensus 196 ----~~g~l~~~d~~tG~~~w~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~v~~~~-~~g~l~~~d~~tG~~~w~~~~- 267 (376)
T 3q7m_A 196 ----DNGRVSAVLMEQGQMIWQQRISQATGS--TEIDRLSDVDTTPVVVNGVVFALA-YNGNLTALDLRSGQIMWKREL- 267 (376)
T ss_dssp ----TTTEEEEEETTTCCEEEEEECCC-------------CCCCCCEEETTEEEEEC-TTSCEEEEETTTCCEEEEECC-
T ss_pred ----CCCEEEEEECCCCcEEEEEecccCCCC--cccccccccCCCcEEECCEEEEEe-cCcEEEEEECCCCcEEeeccC-
Confidence 12468899998764 76543322100 000000001122345688888765 4568999999876 576531
Q ss_pred CCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCCCCCCCCeeE
Q 012755 384 LPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDGNSGEAQWNE 438 (457)
Q Consensus 384 ~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~~w~~~~W~~ 438 (457)
+. ...++..++.||+..... .++.+|+.+ ++..|+.
T Consensus 268 -~~--------~~~~~~~~~~l~~~~~~g-------~l~~~d~~t---G~~~w~~ 303 (376)
T 3q7m_A 268 -GS--------VNDFIVDGNRIYLVDQND-------RVMALTIDG---GVTLWTQ 303 (376)
T ss_dssp -CC--------EEEEEEETTEEEEEETTC-------CEEEEETTT---CCEEEEE
T ss_pred -CC--------CCCceEECCEEEEEcCCC-------eEEEEECCC---CcEEEee
Confidence 11 123446689999976422 488899987 5667875
No 26
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.24 E-value=0.00054 Score=65.63 Aligned_cols=222 Identities=9% Similarity=-0.053 Sum_probs=127.9
Q ss_pred CccEEEEeCCCCcEEeCCCC-CCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCcE-EeCCCCCCCccceeEE
Q 012755 169 LMPWEAFDPLRQRWMRLPRM-QCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANCW-SKCPQMNLPRCLFGSS 246 (457)
Q Consensus 169 ~~~~~~ydp~~~~W~~l~~~-p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W-~~l~~lp~~r~~~~~~ 246 (457)
...+-.+|+.+.++..--.. ...+........++..++++|+... ..+.+.++|+.|.+- .+++....| ..++
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~--~~~~v~viD~~t~~~~~~i~~~~~p---~~i~ 90 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVN--NSHVIFAIDINTFKEVGRITGFTSP---RYIH 90 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEG--GGTEEEEEETTTCCEEEEEECCSSE---EEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEc--CCCEEEEEECcccEEEEEcCCCCCC---cEEE
Confidence 35788899998876432100 0000000111224567899999764 345799999998876 345433333 3344
Q ss_pred e-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEE-C--CCCCC-CCcceeEEEECCEEEEEeccCCCCCCCceEEEEEC
Q 012755 247 S-LGEVAIVAGGTDKNGCILKSAELYNSELGTWET-L--PDMNL-PRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNL 321 (457)
Q Consensus 247 ~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~-~--~~~p~-~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~ 321 (457)
. -++++||.... ...+.++|+.+++-.. + +.... ...-..++..++++|+..- ...+.+.++|+
T Consensus 91 ~~~~g~lyv~~~~------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~-----~~~~~v~viD~ 159 (328)
T 3dsm_A 91 FLSDEKAYVTQIW------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCW-----SYQNRILKIDT 159 (328)
T ss_dssp EEETTEEEEEEBS------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEEC-----TTCCEEEEEET
T ss_pred EeCCCeEEEEECC------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcC-----CCCCEEEEEEC
Confidence 4 57899998642 3579999999987442 2 22000 0022334557999999842 02457899999
Q ss_pred CCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecC----------CCeEEEEECCCCcEEEeccCCCccCCC
Q 012755 322 ETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQA----------TNVVKKYNKTNNSWTVVKRLPVRANSF 391 (457)
Q Consensus 322 ~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~----------~~~v~~Yd~~~~~W~~v~~~p~~~~~~ 391 (457)
++++....-.... . +. ...+.-+|++|+.... .+.|.++|+++++....-.++....
T Consensus 160 ~t~~~~~~i~~g~-------~--p~--~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~-- 226 (328)
T 3dsm_A 160 ETDKVVDELTIGI-------Q--PT--SLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDW-- 226 (328)
T ss_dssp TTTEEEEEEECSS-------C--BC--CCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCC--
T ss_pred CCCeEEEEEEcCC-------C--cc--ceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCC--
Confidence 9987643322111 0 11 1122236899888643 2689999999987654333332211
Q ss_pred CcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 392 NGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 392 ~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
-.++++..-++.||+..+ .+++||++++
T Consensus 227 -p~~la~~~d~~~lyv~~~---------~v~~~d~~t~ 254 (328)
T 3dsm_A 227 -PSEVQLNGTRDTLYWINN---------DIWRMPVEAD 254 (328)
T ss_dssp -CEEEEECTTSCEEEEESS---------SEEEEETTCS
T ss_pred -ceeEEEecCCCEEEEEcc---------EEEEEECCCC
Confidence 112222223678888654 3788999875
No 27
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.19 E-value=0.00017 Score=65.86 Aligned_cols=186 Identities=16% Similarity=0.082 Sum_probs=119.9
Q ss_pred eEEeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEE-
Q 012755 201 SLAVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWE- 279 (457)
Q Consensus 201 ~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~- 279 (457)
+...++.||+..|....+.+.++|+.|++=..--+++..-.+.+++..+++||+.... .+.+++||+.|.+=.
T Consensus 26 L~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~------~~~v~v~D~~tl~~~~ 99 (243)
T 3mbr_X 26 LFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWR------NHEGFVYDLATLTPRA 99 (243)
T ss_dssp EEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS------SSEEEEEETTTTEEEE
T ss_pred EEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEee------CCEEEEEECCcCcEEE
Confidence 4556889999988877789999999999875544555554566778889999998532 368999999887643
Q ss_pred ECCCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCceE-EcCC--CCCCCCCCCCCCCCCCCCEEEEECC
Q 012755 280 TLPDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWK-RIEN--MYPSNVGTQSNPAMSSPPLVAVVNN 356 (457)
Q Consensus 280 ~~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~-~~~~--~~~~~~~~~~~~~~r~~~~~~~~~g 356 (457)
+++. +....+.+.-++++|+.-| .+.+..+|++|.+-. .+.- .+. + .+.--.+...+|
T Consensus 100 ti~~---~~~Gwglt~dg~~L~vSdg-------s~~l~~iDp~t~~~~~~I~V~~~g~--------~-~~~lNeLe~~~G 160 (243)
T 3mbr_X 100 RFRY---PGEGWALTSDDSHLYMSDG-------TAVIRKLDPDTLQQVGSIKVTAGGR--------P-LDNLNELEWVNG 160 (243)
T ss_dssp EEEC---SSCCCEEEECSSCEEEECS-------SSEEEEECTTTCCEEEEEECEETTE--------E-CCCEEEEEEETT
T ss_pred EEeC---CCCceEEeeCCCEEEEECC-------CCeEEEEeCCCCeEEEEEEEccCCc--------c-cccceeeEEeCC
Confidence 2322 2234455555677888643 356899999997643 2221 111 0 111123445699
Q ss_pred EEEEEecCCCeEEEEECCCCc---EEEeccCCCcc------CCCCcceEEEEEeCCEEEEEcCc
Q 012755 357 QLYSADQATNVVKKYNKTNNS---WTVVKRLPVRA------NSFNGWGLAFKACGNSLLVIGGH 411 (457)
Q Consensus 357 ~ly~~gg~~~~v~~Yd~~~~~---W~~v~~~p~~~------~~~~~~~~~~~~~~g~lyv~GG~ 411 (457)
+||+---..+.|.+-|+++++ |-.+..+.... ....-.|.|...-+++|||.|-.
T Consensus 161 ~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 161 ELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp EEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred EEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 999777678899999999985 55555442211 10111234443446899998854
No 28
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.00 E-value=0.00078 Score=62.06 Aligned_cols=187 Identities=10% Similarity=-0.073 Sum_probs=115.5
Q ss_pred EEeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEE-E
Q 012755 202 LAVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWE-T 280 (457)
Q Consensus 202 ~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~-~ 280 (457)
...++.||+..|....+.+.++|+.|++=..--+++..-...+++..+++||+.... .+.+.+||++|.+=. +
T Consensus 49 ~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~------~~~v~v~D~~t~~~~~t 122 (262)
T 3nol_A 49 FYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWK------NGLGFVWNIRNLRQVRS 122 (262)
T ss_dssp EEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS------SSEEEEEETTTCCEEEE
T ss_pred EEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEee------CCEEEEEECccCcEEEE
Confidence 344889999998877778999999999765433444433455678889999998542 368999999987743 3
Q ss_pred CCCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCceE-EcCCCCCCCCCCCCCCCCCCCCEEEEECCEEE
Q 012755 281 LPDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWK-RIENMYPSNVGTQSNPAMSSPPLVAVVNNQLY 359 (457)
Q Consensus 281 ~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly 359 (457)
++- +-.+.+.+.-++.+|+.-| .+.+..+|++|.+-. .++--.. +.+ ...--.+...+|+||
T Consensus 123 i~~---~~eG~glt~dg~~L~~SdG-------s~~i~~iDp~T~~v~~~I~V~~~------g~~-~~~lNELe~~~G~ly 185 (262)
T 3nol_A 123 FNY---DGEGWGLTHNDQYLIMSDG-------TPVLRFLDPESLTPVRTITVTAH------GEE-LPELNELEWVDGEIF 185 (262)
T ss_dssp EEC---SSCCCCEEECSSCEEECCS-------SSEEEEECTTTCSEEEEEECEET------TEE-CCCEEEEEEETTEEE
T ss_pred EEC---CCCceEEecCCCEEEEECC-------CCeEEEEcCCCCeEEEEEEeccC------Ccc-ccccceeEEECCEEE
Confidence 322 1233445554667887533 356899999987643 2221100 000 011112445699999
Q ss_pred EEecCCCeEEEEECCCCc---EEEeccCCCcc-----CCCCcceEEEEEeCCEEEEEcCc
Q 012755 360 SADQATNVVKKYNKTNNS---WTVVKRLPVRA-----NSFNGWGLAFKACGNSLLVIGGH 411 (457)
Q Consensus 360 ~~gg~~~~v~~Yd~~~~~---W~~v~~~p~~~-----~~~~~~~~~~~~~~g~lyv~GG~ 411 (457)
+---..+.|.+-|+++++ |-.++.+.... ....-.|.|...-.++|||.|-.
T Consensus 186 an~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 186 ANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp EEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred EEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 877678899999999985 44444332111 00111244444446789998854
No 29
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=97.92 E-value=1.6e-06 Score=81.40 Aligned_cols=46 Identities=20% Similarity=0.268 Sum_probs=42.4
Q ss_pred CCCCCCCcHHHHhhhceeccccccC-cccccChhhhhhhccCcchhh
Q 012755 107 DSFLPGLHDDATLDILAWSSRSDYP-TLSCLNRKFKSLIASGYLYKL 152 (457)
Q Consensus 107 ~~~~~~LPddl~~~iLarlp~~~~~-~l~~v~k~w~~li~s~~~~~~ 152 (457)
...+..||+||+++||++||.+++. ++++|||+|+.|+.++.|...
T Consensus 48 ~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~ 94 (297)
T 2e31_A 48 VEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLL 94 (297)
T ss_dssp CCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHH
T ss_pred ccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHH
Confidence 4467899999999999999999999 999999999999999988764
No 30
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.83 E-value=0.0019 Score=58.89 Aligned_cols=164 Identities=16% Similarity=0.066 Sum_probs=105.5
Q ss_pred ceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEEC
Q 012755 242 LFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNL 321 (457)
Q Consensus 242 ~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~ 321 (457)
-+++...++.+|+..|..+. +.+.++|++|++=..--+++..-...+.+..+++||+... ..+.+.+||+
T Consensus 23 tqGL~~~~~~LyestG~~g~----S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw------~~~~v~v~D~ 92 (243)
T 3mbr_X 23 TEGLFYLRGHLYESTGETGR----SSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTW------RNHEGFVYDL 92 (243)
T ss_dssp EEEEEEETTEEEEEECCTTS----CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEES------SSSEEEEEET
T ss_pred cccEEEECCEEEEECCCCCC----ceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEe------eCCEEEEEEC
Confidence 34677789999999886543 6889999999986554455555456677888999999853 2467899999
Q ss_pred CCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCcEE-Eec--cCCCccCCCCcceEEE
Q 012755 322 ETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQATNVVKKYNKTNNSWT-VVK--RLPVRANSFNGWGLAF 398 (457)
Q Consensus 322 ~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~~W~-~v~--~~p~~~~~~~~~~~~~ 398 (457)
++.+- +..++. ...+.+++.-+++||+-.| .+.++.+|+++.+=. .+. ..+.+.. .. -.+
T Consensus 93 ~tl~~--~~ti~~----------~~~Gwglt~dg~~L~vSdg-s~~l~~iDp~t~~~~~~I~V~~~g~~~~---~l-NeL 155 (243)
T 3mbr_X 93 ATLTP--RARFRY----------PGEGWALTSDDSHLYMSDG-TAVIRKLDPDTLQQVGSIKVTAGGRPLD---NL-NEL 155 (243)
T ss_dssp TTTEE--EEEEEC----------SSCCCEEEECSSCEEEECS-SSEEEEECTTTCCEEEEEECEETTEECC---CE-EEE
T ss_pred CcCcE--EEEEeC----------CCCceEEeeCCCEEEEECC-CCeEEEEeCCCCeEEEEEEEccCCcccc---cc-eee
Confidence 87653 333333 2234566666778998886 789999999987532 222 1111111 11 124
Q ss_pred EEeCCEEEEEcCcCCCCCceEEEEEeeCCCCCCCCCCeeEec
Q 012755 399 KACGNSLLVIGGHRELQGEIIVLHSWDPTDGNSGEAQWNELA 440 (457)
Q Consensus 399 ~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~~w~~~~W~~l~ 440 (457)
...+|+||+---.. ..|.+.||.++ .-..|-.++
T Consensus 156 e~~~G~lyanvw~s------~~I~vIDp~tG--~V~~~idl~ 189 (243)
T 3mbr_X 156 EWVNGELLANVWLT------SRIARIDPASG--KVVAWIDLQ 189 (243)
T ss_dssp EEETTEEEEEETTT------TEEEEECTTTC--BEEEEEECG
T ss_pred EEeCCEEEEEECCC------CeEEEEECCCC--CEEEEEECC
Confidence 44589998643221 26888899884 222454444
No 31
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.67 E-value=0.034 Score=51.20 Aligned_cols=232 Identities=11% Similarity=0.092 Sum_probs=118.3
Q ss_pred ccEEEEEe-cCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEE--eCCEEEEEceecCCcEEEEEECCCCcEEeCCCC
Q 012755 160 EHWVYLAC-ILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLA--VGTQLLVFGRELSGFAIWMYSLIANCWSKCPQM 236 (457)
Q Consensus 160 ~~~l~~~~-~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~--~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~l 236 (457)
++.+|+.. ....+..||+.......+...............++. .++.+|+.+.. ....+.+||+..+.-..+...
T Consensus 40 ~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~-~~~~i~~~d~~g~~~~~~~~~ 118 (286)
T 1q7f_A 40 QNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS-PTHQIQIYNQYGQFVRKFGAT 118 (286)
T ss_dssp TCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG-GGCEEEEECTTSCEEEEECTT
T ss_pred CCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC-CCCEEEEECCCCcEEEEecCc
Confidence 34566653 345688899875543333321110000011112333 36788887632 134789999655444444221
Q ss_pred CCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE--CCEEEEEeccCCCCCCC
Q 012755 237 NLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPL 313 (457)
Q Consensus 237 p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~ 313 (457)
... ...+++. -++++|+.... ...+.+||+.......+..... ......+.+ +|.+|+.... .
T Consensus 119 ~~~-~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~~~~~~~~~~~-~~~p~~i~~~~~g~l~v~~~~------~ 184 (286)
T 1q7f_A 119 ILQ-HPRGVTVDNKGRIIVVECK------VMRVIIFDQNGNVLHKFGCSKH-LEFPNGVVVNDKQEIFISDNR------A 184 (286)
T ss_dssp TCS-CEEEEEECTTSCEEEEETT------TTEEEEECTTSCEEEEEECTTT-CSSEEEEEECSSSEEEEEEGG------G
T ss_pred cCC-CceEEEEeCCCCEEEEECC------CCEEEEEcCCCCEEEEeCCCCc-cCCcEEEEECCCCCEEEEECC------C
Confidence 111 1123333 26788887532 2578899987655444421111 112222333 5889987542 3
Q ss_pred ceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCC-eEEEEECCCCcEEEeccCCCccCC
Q 012755 314 TCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATN-VVKKYNKTNNSWTVVKRLPVRANS 390 (457)
Q Consensus 314 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~-~v~~Yd~~~~~W~~v~~~p~~~~~ 390 (457)
..+.+||+.......+.... ....+..+++ +|+||+.....+ .|.+||++...-..+..-.....
T Consensus 185 ~~i~~~~~~g~~~~~~~~~g-----------~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~- 252 (286)
T 1q7f_A 185 HCVKVFNYEGQYLRQIGGEG-----------ITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQ- 252 (286)
T ss_dssp TEEEEEETTCCEEEEESCTT-----------TSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSC-
T ss_pred CEEEEEcCCCCEEEEEccCC-----------ccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCCCCc-
Confidence 46889998765444443211 0112223333 678999886665 89999987654444432111100
Q ss_pred CCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 391 FNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 391 ~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
-.++ +..-+|+||+... + + .+.+|+...
T Consensus 253 --~~~i-~~~~~g~l~vs~~-~--~----~v~v~~~~~ 280 (286)
T 1q7f_A 253 --CFDV-ALMDDGSVVLASK-D--Y----RLYIYRYVQ 280 (286)
T ss_dssp --EEEE-EEETTTEEEEEET-T--T----EEEEEECSC
T ss_pred --ceeE-EECCCCcEEEECC-C--C----eEEEEEccc
Confidence 1122 2234789999842 2 1 466676654
No 32
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.63 E-value=0.0083 Score=54.76 Aligned_cols=224 Identities=14% Similarity=0.011 Sum_probs=116.1
Q ss_pred ccEEEE-E-ecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEE-eCCEEEEEceecCCcEEEEEECCCCcEEeCCCC
Q 012755 160 EHWVYL-A-CILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLA-VGTQLLVFGRELSGFAIWMYSLIANCWSKCPQM 236 (457)
Q Consensus 160 ~~~l~~-~-~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~l 236 (457)
++.+|+ . .....+..||+.+.....+...... .. ..++. .++.+|+... ...+.+||+.++....+...
T Consensus 34 ~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~p---~~i~~~~~g~l~v~~~---~~~i~~~d~~~~~~~~~~~~ 105 (270)
T 1rwi_B 34 AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLY--QP---QGLAVDGAGTVYVTDF---NNRVVTLAAGSNNQTVLPFD 105 (270)
T ss_dssp TCCEEEEECSSSCEEEEECC-----EECCCCSCC--SC---CCEEECTTCCEEEEET---TTEEEEECTTCSCCEECCCC
T ss_pred CCCEEEEccCCCCcEEEecCCCcccceEeeCCcC--Cc---ceeEECCCCCEEEEcC---CCEEEEEeCCCceEeeeecC
Confidence 345776 5 2356788898877654443321110 01 11222 3567888654 45799999988765544321
Q ss_pred CCCccceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE-CCEEEEEeccCCCCCCCc
Q 012755 237 NLPRCLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM-DGKFYIIGGMSSPTDPLT 314 (457)
Q Consensus 237 p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g~iyv~GG~~~~~~~~~ 314 (457)
.. ....+++.- ++++|+.... ...+.+||..+........... ..-..+++- +|++|+.... ..
T Consensus 106 ~~-~~p~~i~~~~~g~l~v~~~~------~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~~------~~ 171 (270)
T 1rwi_B 106 GL-NYPEGLAVDTQGAVYVADRG------NNRVVKLAAGSKTQTVLPFTGL-NDPDGVAVDNSGNVYVTDTD------NN 171 (270)
T ss_dssp SC-SSEEEEEECTTCCEEEEEGG------GTEEEEECTTCCSCEECCCCSC-CSCCCEEECTTCCEEEEEGG------GT
T ss_pred Cc-CCCcceEECCCCCEEEEECC------CCEEEEEECCCceeEeeccccC-CCceeEEEeCCCCEEEEECC------CC
Confidence 11 112233333 6788887532 2468888877765543321111 111223333 5789987532 24
Q ss_pred eEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCc
Q 012755 315 CGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV-NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNG 393 (457)
Q Consensus 315 ~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~ 393 (457)
.+.+||+.+..-...... . .....+++.- +|.||+.....+.|.+||+.+..-..... .. .. .
T Consensus 172 ~i~~~~~~~~~~~~~~~~-~----------~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~-~~-~~---~ 235 (270)
T 1rwi_B 172 RVVKLEAESNNQVVLPFT-D----------ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPF-TG-LN---T 235 (270)
T ss_dssp EEEEECTTTCCEEECCCS-S----------CCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCC-CS-CS---C
T ss_pred EEEEEecCCCceEeeccc-C----------CCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeecc-CC-CC---C
Confidence 688999887664433211 1 1111223332 56899988667789999998764332211 10 00 1
Q ss_pred ceEEEEE-eCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 394 WGLAFKA-CGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 394 ~~~~~~~-~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
-..++. -+|+||+....++ .|.+|+...
T Consensus 236 -p~~i~~~~~g~l~v~~~~~~------~v~~~~~~~ 264 (270)
T 1rwi_B 236 -PLAVAVDSDRTVYVADRGND------RVVKLTSLE 264 (270)
T ss_dssp -EEEEEECTTCCEEEEEGGGT------EEEEECCCG
T ss_pred -ceeEEECCCCCEEEEECCCC------EEEEEcCCC
Confidence 112322 3578988765432 577777765
No 33
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.62 E-value=0.0026 Score=58.57 Aligned_cols=156 Identities=10% Similarity=-0.093 Sum_probs=97.3
Q ss_pred eeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECC
Q 012755 243 FGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLE 322 (457)
Q Consensus 243 ~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~ 322 (457)
.++...++.+|+..|..+ .+.+.++|++|++=..--+++..-...+.+..+++||+... ..+.+.+||++
T Consensus 46 qGL~~~~~~LyestG~~g----~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw------~~~~v~v~D~~ 115 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNG----RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTW------KNGLGFVWNIR 115 (262)
T ss_dssp EEEEEETTEEEEEEEETT----EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEES------SSSEEEEEETT
T ss_pred ceEEEECCEEEEECCCCC----CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEe------eCCEEEEEECc
Confidence 455666899999998654 36789999999985443344443345567788999999843 24678999998
Q ss_pred CCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCcEE-EeccCCCccCCCCcceEEEEEe
Q 012755 323 TRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQATNVVKKYNKTNNSWT-VVKRLPVRANSFNGWGLAFKAC 401 (457)
Q Consensus 323 t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~~W~-~v~~~p~~~~~~~~~~~~~~~~ 401 (457)
+.+-. ..++. .-.+.+++.-+++||+..| .+.++.+|+++.+=. .+.--...+... ... .+...
T Consensus 116 t~~~~--~ti~~----------~~eG~glt~dg~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g~~~~-~lN-ELe~~ 180 (262)
T 3nol_A 116 NLRQV--RSFNY----------DGEGWGLTHNDQYLIMSDG-TPVLRFLDPESLTPVRTITVTAHGEELP-ELN-ELEWV 180 (262)
T ss_dssp TCCEE--EEEEC----------SSCCCCEEECSSCEEECCS-SSEEEEECTTTCSEEEEEECEETTEECC-CEE-EEEEE
T ss_pred cCcEE--EEEEC----------CCCceEEecCCCEEEEECC-CCeEEEEcCCCCeEEEEEEeccCCcccc-ccc-eeEEE
Confidence 87643 22222 1133456655677888876 689999999986532 332111111100 111 13344
Q ss_pred CCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 402 GNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 402 ~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
+|+||+---. ...|.+.||+++
T Consensus 181 ~G~lyan~w~------~~~I~vIDp~tG 202 (262)
T 3nol_A 181 DGEIFANVWQ------TNKIVRIDPETG 202 (262)
T ss_dssp TTEEEEEETT------SSEEEEECTTTC
T ss_pred CCEEEEEEcc------CCeEEEEECCCC
Confidence 8899864321 136888899884
No 34
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.58 E-value=0.0091 Score=55.29 Aligned_cols=185 Identities=11% Similarity=0.049 Sum_probs=109.4
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcE-EECCC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTW-ETLPD 283 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W-~~~~~ 283 (457)
++.+|+..|....+.+.++|+.|++=..--+++......+++..++++|+..- ..+.+.+||+.|.+= ..++.
T Consensus 31 dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~------~~~~v~viD~~t~~v~~~i~~ 104 (266)
T 2iwa_A 31 NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVW------LKNIGFIYDRRTLSNIKNFTH 104 (266)
T ss_dssp TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEET------TCSEEEEEETTTTEEEEEEEC
T ss_pred CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEe------cCCEEEEEECCCCcEEEEEEC
Confidence 37999987766667899999999986543233333344566777899999853 236899999988752 22321
Q ss_pred -CCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCceE-EcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEE
Q 012755 284 -MNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWK-RIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSA 361 (457)
Q Consensus 284 -~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~ 361 (457)
++. ..+.+.-++++|+..| .+.+..+|+++.+=. .++--.. ..+ ......+...+|+||+-
T Consensus 105 g~~~---g~glt~Dg~~l~vs~g-------s~~l~viD~~t~~v~~~I~Vg~~------~~p-~~~~nele~~dg~lyvn 167 (266)
T 2iwa_A 105 QMKD---GWGLATDGKILYGSDG-------TSILYEIDPHTFKLIKKHNVKYN------GHR-VIRLNELEYINGEVWAN 167 (266)
T ss_dssp CSSS---CCEEEECSSSEEEECS-------SSEEEEECTTTCCEEEEEECEET------TEE-CCCEEEEEEETTEEEEE
T ss_pred CCCC---eEEEEECCCEEEEECC-------CCeEEEEECCCCcEEEEEEECCC------Ccc-cccceeEEEECCEEEEe
Confidence 122 2333333567887632 357899999886532 2221000 000 01111344459999988
Q ss_pred ecCCCeEEEEECCCCc---EEEeccCCCc------cCCCCcceEEEEEeCCEEEEEcCcC
Q 012755 362 DQATNVVKKYNKTNNS---WTVVKRLPVR------ANSFNGWGLAFKACGNSLLVIGGHR 412 (457)
Q Consensus 362 gg~~~~v~~Yd~~~~~---W~~v~~~p~~------~~~~~~~~~~~~~~~g~lyv~GG~~ 412 (457)
....+.|.+-|+++++ |-.++.+... .....-.|++...-++++||.|+..
T Consensus 168 ~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~ 227 (266)
T 2iwa_A 168 IWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW 227 (266)
T ss_dssp ETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC
T ss_pred cCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC
Confidence 7678899999999874 3333322100 0000012444433467999999765
No 35
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.51 E-value=0.03 Score=51.54 Aligned_cols=223 Identities=6% Similarity=-0.073 Sum_probs=117.3
Q ss_pred ccEEEEEec-CccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEE-eCCEEEEEceecCCcEEEEEECCCCcEEeCCCCC
Q 012755 160 EHWVYLACI-LMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLA-VGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMN 237 (457)
Q Consensus 160 ~~~l~~~~~-~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp 237 (457)
++.+|+... ...+..||+. .+...+. +|..... ...++. .++.+|+... ....+.++|+ +++........
T Consensus 67 ~g~l~v~~~~~~~i~~~~~~-g~~~~~~-~~~~~~~---~~~i~~~~~g~l~v~~~--~~~~i~~~d~-~g~~~~~~~~~ 138 (299)
T 2z2n_A 67 DGEVWFTENAANKIGRITKK-GIIKEYT-LPNPDSA---PYGITEGPNGDIWFTEM--NGNRIGRITD-DGKIREYELPN 138 (299)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEEEEE-CSSTTCC---EEEEEECTTSCEEEEET--TTTEEEEECT-TCCEEEEECSS
T ss_pred CCCEEEeCCCCCeEEEECCC-CcEEEEe-CCCcCCC---ceeeEECCCCCEEEEec--CCceEEEECC-CCCEEEecCCC
Confidence 445666654 4568889986 4444332 1211101 111222 2578888642 2357899999 66665432111
Q ss_pred CCccceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE--CCEEEEEeccCCCCCCCc
Q 012755 238 LPRCLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLT 314 (457)
Q Consensus 238 ~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~ 314 (457)
......+++.- ++.+|+... ....+.+||+ +++..... .+..........+ +|.+|+... ...
T Consensus 139 ~~~~~~~i~~~~~g~l~v~~~------~~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~------~~~ 204 (299)
T 2z2n_A 139 KGSYPSFITLGSDNALWFTEN------QNNAIGRITE-SGDITEFK-IPTPASGPVGITKGNDDALWFVEI------IGN 204 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEET------TTTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEET------TTT
T ss_pred CCCCCceEEEcCCCCEEEEeC------CCCEEEEEcC-CCcEEEee-CCCCCCcceeEEECCCCCEEEEcc------CCc
Confidence 11122233333 568888642 1257889999 77776542 1111112222333 578888642 134
Q ss_pred eEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCC
Q 012755 315 CGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFN 392 (457)
Q Consensus 315 ~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~ 392 (457)
.+.+||+ +++...+.. +. ....+..+.+ +|+||+.....+.+.+||+ +++...+. .+....
T Consensus 205 ~i~~~~~-~g~~~~~~~-~~----------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~-~~~~~~--- 267 (299)
T 2z2n_A 205 KIGRITT-SGEITEFKI-PT----------PNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYP-IQIKSA--- 267 (299)
T ss_dssp EEEEECT-TCCEEEEEC-SS----------TTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEE-CSSSSC---
T ss_pred eEEEECC-CCcEEEEEC-CC----------CCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEe-CCCCCC---
Confidence 6889999 777765422 11 1112223333 6789988756688999999 45554442 221111
Q ss_pred cceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 393 GWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 393 ~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
.. ..++..+|+||+..... .+..++++++
T Consensus 268 ~~-~~i~~~~g~l~v~~~~~-------~l~~~~~~~~ 296 (299)
T 2z2n_A 268 EP-HGICFDGETIWFAMECD-------KIGKLTLIKD 296 (299)
T ss_dssp CE-EEEEECSSCEEEEETTT-------EEEEEEEC--
T ss_pred cc-ceEEecCCCEEEEecCC-------cEEEEEcCcc
Confidence 11 12223678898875421 4777888763
No 36
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.49 E-value=0.0052 Score=56.61 Aligned_cols=185 Identities=11% Similarity=-0.060 Sum_probs=111.2
Q ss_pred eEEeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEE-
Q 012755 201 SLAVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWE- 279 (457)
Q Consensus 201 ~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~- 279 (457)
+...++.||+..|... .+.++|+.|++=..-- ++..-...+++..+++||+.... .+.+++||++|.+=.
T Consensus 60 L~~~~~~Ly~stG~~g--~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~------~~~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 60 LVFHQGHFFESTGHQG--TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWT------EGLLFTWSGMPPQRER 130 (268)
T ss_dssp EEEETTEEEEEETTTT--EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESS------SCEEEEEETTTTEEEE
T ss_pred EEEECCEEEEEcCCCC--EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEcc------CCEEEEEECCcCcEEE
Confidence 3445889999877643 3999999988653322 44333445678889999998442 368999999987743
Q ss_pred ECCCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCceEE-cCCCCCCCCCCCCCCCCCCCCEEEEECCEE
Q 012755 280 TLPDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKR-IENMYPSNVGTQSNPAMSSPPLVAVVNNQL 358 (457)
Q Consensus 280 ~~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~g~l 358 (457)
+++-. -...+.+.-++++|+.-| .+.+..+|++|.+-.. +.--..+ .+ ....-.+...+|+|
T Consensus 131 ti~~~---~eGwGLt~Dg~~L~vSdG-------s~~l~~iDp~T~~v~~~I~V~~~g------~~-v~~lNeLe~~dG~l 193 (268)
T 3nok_A 131 TTRYS---GEGWGLCYWNGKLVRSDG-------GTMLTFHEPDGFALVGAVQVKLRG------QP-VELINELECANGVI 193 (268)
T ss_dssp EEECS---SCCCCEEEETTEEEEECS-------SSEEEEECTTTCCEEEEEECEETT------EE-CCCEEEEEEETTEE
T ss_pred EEeCC---CceeEEecCCCEEEEECC-------CCEEEEEcCCCCeEEEEEEeCCCC------cc-cccccccEEeCCEE
Confidence 33322 224456666788998743 3578999999976432 2210010 00 01111244559999
Q ss_pred EEEecCCCeEEEEECCCCc---EEEeccCCC------ccCCCCcceEEEEEeCCEEEEEcCc
Q 012755 359 YSADQATNVVKKYNKTNNS---WTVVKRLPV------RANSFNGWGLAFKACGNSLLVIGGH 411 (457)
Q Consensus 359 y~~gg~~~~v~~Yd~~~~~---W~~v~~~p~------~~~~~~~~~~~~~~~~g~lyv~GG~ 411 (457)
|+---..+.|.+-|+++++ |-.+..+.. ......-.|.|...-+++|||.|-.
T Consensus 194 yanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 194 YANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL 255 (268)
T ss_dssp EEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT
T ss_pred EEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC
Confidence 9776668899999999985 444443311 0010011233333335789997743
No 37
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.48 E-value=0.04 Score=50.63 Aligned_cols=224 Identities=9% Similarity=-0.040 Sum_probs=118.1
Q ss_pred ccEEEEEec-CccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEE-eCCEEEEEceecCCcEEEEEECCCCcEEeCCCCC
Q 012755 160 EHWVYLACI-LMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLA-VGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMN 237 (457)
Q Consensus 160 ~~~l~~~~~-~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp 237 (457)
++.+|+... ...+..||+. ..+......... ... ..++. .++.+|+... ....+++||+. ++.+.+....
T Consensus 25 ~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~-~~~---~~i~~~~~g~l~v~~~--~~~~i~~~~~~-g~~~~~~~~~ 96 (299)
T 2z2n_A 25 KGKVWITQHKANMISCINLD-GKITEYPLPTPD-AKV---MCLTISSDGEVWFTEN--AANKIGRITKK-GIIKEYTLPN 96 (299)
T ss_dssp TSCEEEEETTTTEEEEECTT-CCEEEEECSSTT-CCE---EEEEECTTSCEEEEET--TTTEEEEECTT-SCEEEEECSS
T ss_pred CCCEEEEecCCCcEEEEcCC-CCeEEecCCccc-Cce---eeEEECCCCCEEEeCC--CCCeEEEECCC-CcEEEEeCCC
Confidence 455676654 4578899998 666554311111 010 11222 3677887642 23468999986 4554432111
Q ss_pred CCccceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE-CCEEEEEeccCCCCCCCce
Q 012755 238 LPRCLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM-DGKFYIIGGMSSPTDPLTC 315 (457)
Q Consensus 238 ~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g~iyv~GG~~~~~~~~~~ 315 (457)
.....++++.- ++.+|+.... ...+.+||+ +++...............++.- +|.+|+... ....
T Consensus 97 ~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~------~~~~ 163 (299)
T 2z2n_A 97 PDSAPYGITEGPNGDIWFTEMN------GNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTEN------QNNA 163 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETT------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEET------TTTE
T ss_pred cCCCceeeEECCCCCEEEEecC------CceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeC------CCCE
Confidence 11122333333 5788886432 246888998 6665544211111112223332 578988642 1346
Q ss_pred EEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcc
Q 012755 316 GEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV-NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGW 394 (457)
Q Consensus 316 ~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~ 394 (457)
+.+||+ +++...+..... ......++.- +|.||+.....+.+.+||+ +++...+. .+.... .
T Consensus 164 i~~~~~-~g~~~~~~~~~~----------~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~-~~~~~~---~- 226 (299)
T 2z2n_A 164 IGRITE-SGDITEFKIPTP----------ASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFK-IPTPNA---R- 226 (299)
T ss_dssp EEEECT-TCCEEEEECSST----------TCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEE-CSSTTC---C-
T ss_pred EEEEcC-CCcEEEeeCCCC----------CCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEE-CCCCCC---C-
Confidence 889999 777765421111 1111223332 5789988766789999999 77776642 221111 1
Q ss_pred eEEEEE-eCCEEEEEcCcCCCCCceEEEEEeeCC
Q 012755 395 GLAFKA-CGNSLLVIGGHRELQGEIIVLHSWDPT 427 (457)
Q Consensus 395 ~~~~~~-~~g~lyv~GG~~~~~~~~~~v~~y~~~ 427 (457)
-..++. -+|+||+..... ..+..||++
T Consensus 227 ~~~i~~~~~g~l~v~~~~~------~~i~~~d~~ 254 (299)
T 2z2n_A 227 PHAITAGAGIDLWFTEWGA------NKIGRLTSN 254 (299)
T ss_dssp EEEEEECSTTCEEEEETTT------TEEEEEETT
T ss_pred ceeEEECCCCCEEEeccCC------ceEEEECCC
Confidence 112322 367888875222 147778873
No 38
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.44 E-value=0.059 Score=50.84 Aligned_cols=230 Identities=8% Similarity=-0.056 Sum_probs=118.0
Q ss_pred ccEEEEEec-------CccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeC-CEEEEEceecCCcEEEEEECCCCcEE
Q 012755 160 EHWVYLACI-------LMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVG-TQLLVFGRELSGFAIWMYSLIANCWS 231 (457)
Q Consensus 160 ~~~l~~~~~-------~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~-~~lyv~GG~~~~~~v~~yd~~t~~W~ 231 (457)
...+|+... ...+..+|+.+.+-...-+.... ... ..+..+ +.+|+.+.. ...+.++|+.+++-.
T Consensus 52 g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~---~~~s~dg~~l~v~~~~--~~~v~~~d~~~~~~~ 124 (353)
T 3vgz_A 52 ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLK--PFG---ATINNTTQTLWFGNTV--NSAVTAIDAKTGEVK 124 (353)
T ss_dssp TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSC--CCS---EEEETTTTEEEEEETT--TTEEEEEETTTCCEE
T ss_pred CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCC--cce---EEECCCCCEEEEEecC--CCEEEEEeCCCCeeE
Confidence 356676552 34688899887754322111111 111 123333 457776542 347999999988743
Q ss_pred eCCCCCC--------CccceeEEe--eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEE-EC-CE
Q 012755 232 KCPQMNL--------PRCLFGSSS--LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFF-MD-GK 299 (457)
Q Consensus 232 ~l~~lp~--------~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~-g~ 299 (457)
..-+.+. +.....++. -++.+|+.+... ...++++|+.+.+-...-+... ......+. -+ +.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~s~dg~~ 198 (353)
T 3vgz_A 125 GRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-----ESVIWVVDGGNIKLKTAIQNTG-KMSTGLALDSEGKR 198 (353)
T ss_dssp EEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-----SCEEEEEETTTTEEEEEECCCC-TTCCCCEEETTTTE
T ss_pred EEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-----CceEEEEcCCCCceEEEecCCC-CccceEEECCCCCE
Confidence 2211111 111122332 245677765321 2569999998876433211111 11122222 24 45
Q ss_pred EEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCC-EEEEE--CCEEEEEecCCCeEEEEECCCC
Q 012755 300 FYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPP-LVAVV--NNQLYSADQATNVVKKYNKTNN 376 (457)
Q Consensus 300 iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~-~~~~~--~g~ly~~gg~~~~v~~Yd~~~~ 376 (457)
+|+... ...+.+||+.+++-...-.... ....... .++.. ++.+|+.....+.+.+||+++.
T Consensus 199 l~~~~~-------~~~i~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 263 (353)
T 3vgz_A 199 LYTTNA-------DGELITIDTADNKILSRKKLLD--------DGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNG 263 (353)
T ss_dssp EEEECT-------TSEEEEEETTTTEEEEEEECCC--------SSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTC
T ss_pred EEEEcC-------CCeEEEEECCCCeEEEEEEcCC--------CCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 666532 2467889998876433222211 0011112 23333 4568877766789999999887
Q ss_pred cEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 377 SWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 377 ~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
+....-..+.+ .++++...++.+|+.+..++ .+.+||..+.
T Consensus 264 ~~~~~~~~~~~------~~~~~s~dg~~l~v~~~~~~------~v~~~d~~~~ 304 (353)
T 3vgz_A 264 NILAKVAAPES------LAVLFNPARNEAYVTHRQAG------KVSVIDAKSY 304 (353)
T ss_dssp CEEEEEECSSC------CCEEEETTTTEEEEEETTTT------EEEEEETTTT
T ss_pred cEEEEEEcCCC------ceEEECCCCCEEEEEECCCC------eEEEEECCCC
Confidence 65443333322 12333233456888765432 5888998764
No 39
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.42 E-value=0.055 Score=50.42 Aligned_cols=226 Identities=11% Similarity=0.115 Sum_probs=113.3
Q ss_pred cEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeE--EeCCEEEEEceecCCcEEEEEECCCCcEEe-CCCCC
Q 012755 161 HWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESL--AVGTQLLVFGRELSGFAIWMYSLIANCWSK-CPQMN 237 (457)
Q Consensus 161 ~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~--~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~-l~~lp 237 (457)
..+...+....+..+|..+.+....-.- +...-..+ ..++.+++.|+.. ..+.+||..+++-.. +.. .
T Consensus 36 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~------h~~~v~~~~~~~~~~~l~s~~~d--~~i~vwd~~~~~~~~~~~~-~ 106 (312)
T 4ery_A 36 EWLASSSADKLIKIWGAYDGKFEKTISG------HKLGISDVAWSSDSNLLVSASDD--KTLKIWDVSSGKCLKTLKG-H 106 (312)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEECC------CSSCEEEEEECTTSSEEEEEETT--SEEEEEETTTCCEEEEEEC-C
T ss_pred CEEEEeeCCCeEEEEeCCCcccchhhcc------CCCceEEEEEcCCCCEEEEECCC--CEEEEEECCCCcEEEEEcC-C
Confidence 3444444456677788776655332110 11100112 2355666666543 468889988765322 111 0
Q ss_pred CCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE--CCEEEEEeccCCCCCCCc
Q 012755 238 LPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLT 314 (457)
Q Consensus 238 ~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~ 314 (457)
.. .-.+++. -++.+++.|+.+ ..+.+||..+++-... ++........+.+ ++++++.|+.+ .
T Consensus 107 ~~-~v~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d------~ 171 (312)
T 4ery_A 107 SN-YVFCCNFNPQSNLIVSGSFD------ESVRIWDVKTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYD------G 171 (312)
T ss_dssp SS-CEEEEEECSSSSEEEEEETT------SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT------S
T ss_pred CC-CEEEEEEcCCCCEEEEEeCC------CcEEEEECCCCEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCC------C
Confidence 11 1111111 245666666644 3588899987764321 1111111222222 56666666543 3
Q ss_pred eEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCC
Q 012755 315 CGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFN 392 (457)
Q Consensus 315 ~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~ 392 (457)
.+..||..+.+-...-... .......+.+ +++.++.++..+.+..||..+..-...-........
T Consensus 172 ~i~~wd~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-- 238 (312)
T 4ery_A 172 LCRIWDTASGQCLKTLIDD-----------DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKY-- 238 (312)
T ss_dssp CEEEEETTTCCEEEEECCS-----------SCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSS--
T ss_pred cEEEEECCCCceeeEEecc-----------CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceE--
Confidence 5788999887643221110 1111122222 567777777888999999988753322111111110
Q ss_pred cceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 393 GWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 393 ~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
.........++.+++.|+.++ .+.+||..+.
T Consensus 239 ~~~~~~~~~~~~~l~sg~~dg------~i~vwd~~~~ 269 (312)
T 4ery_A 239 CIFANFSVTGGKWIVSGSEDN------LVYIWNLQTK 269 (312)
T ss_dssp CCCEEEECSSSCEEEECCTTS------CEEEEETTTC
T ss_pred EEEEEEEeCCCcEEEEECCCC------EEEEEECCCc
Confidence 111222234677888887764 4788888764
No 40
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.37 E-value=0.005 Score=58.90 Aligned_cols=238 Identities=7% Similarity=0.055 Sum_probs=117.9
Q ss_pred cEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEe--C--CEEEEEceecCCcEEEEEECCCCcEEeCCCC
Q 012755 161 HWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAV--G--TQLLVFGRELSGFAIWMYSLIANCWSKCPQM 236 (457)
Q Consensus 161 ~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~--~--~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~l 236 (457)
..|...+....+..||.....+..+..+... ...-..+.. + +.+++.|+.+ ..+.+||..+++|..+..+
T Consensus 24 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~~l~s~~~d--g~v~iwd~~~~~~~~~~~~ 97 (379)
T 3jrp_A 24 KRLATCSSDKTIKIFEVEGETHKLIDTLTGH----EGPVWRVDWAHPKFGTILASCSYD--GKVLIWKEENGRWSQIAVH 97 (379)
T ss_dssp SEEEEEETTSCEEEEEEETTEEEEEEEECCC----SSCEEEEEECCGGGCSEEEEEETT--SCEEEEEEETTEEEEEEEE
T ss_pred CEEEEEECCCcEEEEecCCCcceeeeEecCC----CCcEEEEEeCCCCCCCEEEEeccC--CEEEEEEcCCCceeEeeee
Confidence 3444444456677888765555444332211 111112222 2 5566666543 3588899999887665433
Q ss_pred CCCc-cceeEEee-C--CEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCC-CCcceeEEEE--------------C
Q 012755 237 NLPR-CLFGSSSL-G--EVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNL-PRKLCSGFFM--------------D 297 (457)
Q Consensus 237 p~~r-~~~~~~~~-~--~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~-~r~~~~~~~~--------------~ 297 (457)
.... .-.+++.. + +.+++.|+.+ ..+.+||..+..-...-.+.. ...-.+++.. +
T Consensus 98 ~~~~~~v~~~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 171 (379)
T 3jrp_A 98 AVHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKE 171 (379)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CT
T ss_pred cCCCcceEEEEeCCCCCCCEEEEecCC------CcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCC
Confidence 3221 12222222 2 5566666643 467888887763111000000 1111112221 3
Q ss_pred CEEEEEeccCCCCCCCceEEEEECCCCc--eEEcCCCCCCCCCCCCCCCCCCCCEEEEE--C---CEEEEEecCCCeEEE
Q 012755 298 GKFYIIGGMSSPTDPLTCGEEYNLETRT--WKRIENMYPSNVGTQSNPAMSSPPLVAVV--N---NQLYSADQATNVVKK 370 (457)
Q Consensus 298 g~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~---g~ly~~gg~~~~v~~ 370 (457)
+.+++.|+.+ ..+..||..+.. |..+..+.. .......+.. + +.+++.++..+.+..
T Consensus 172 ~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~----------h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~i 235 (379)
T 3jrp_A 172 SRKFVTGGAD------NLVKIWKYNSDAQTYVLESTLEG----------HSDWVRDVAWSPTVLLRSYLASVSQDRTCII 235 (379)
T ss_dssp TCEEEEEETT------SCEEEEEEETTTTEEEEEEEECC----------CSSCEEEEEECCCCSSSEEEEEEETTSCEEE
T ss_pred CCEEEEEeCC------CeEEEEEecCCCcceeeEEEEec----------ccCcEeEEEECCCCCCCCeEEEEeCCCEEEE
Confidence 6666776643 246778876543 544433322 1222222333 4 788888888889999
Q ss_pred EECCCCc--E--EEeccCCCccCCCCcceEEE-EEeCCEEEEEcCcCCCCCceEEEEEeeCCCCCCCCCCeeEecc
Q 012755 371 YNKTNNS--W--TVVKRLPVRANSFNGWGLAF-KACGNSLLVIGGHRELQGEIIVLHSWDPTDGNSGEAQWNELAV 441 (457)
Q Consensus 371 Yd~~~~~--W--~~v~~~p~~~~~~~~~~~~~-~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~~w~~~~W~~l~~ 441 (457)
||..+.. + ......... ..-..+ ..-+++++++|+.++ .+.+|+...+. +|..+..
T Consensus 236 wd~~~~~~~~~~~~~~~~~~~-----~~v~~~~~s~~g~~l~~~~~dg------~i~iw~~~~~~----~~~~~~~ 296 (379)
T 3jrp_A 236 WTQDNEQGPWKKTLLKEEKFP-----DVLWRASWSLSGNVLALSGGDN------KVTLWKENLEG----KWEPAGE 296 (379)
T ss_dssp EEESSTTSCCEEEESSSSCCS-----SCEEEEEECSSSCCEEEEESSS------SEEEEEEEETT----EEEEEEE
T ss_pred EeCCCCCccceeeeeccccCC-----CcEEEEEEcCCCCEEEEecCCC------cEEEEeCCCCC----ccccccc
Confidence 9988763 1 221111111 111112 223677777776653 36667765431 5766543
No 41
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.35 E-value=0.055 Score=49.69 Aligned_cols=222 Identities=8% Similarity=-0.012 Sum_probs=118.4
Q ss_pred ccEEEEEec-CccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEE-eCCEEEEEceecCCcEEEEEECCCCcEEeCCCCC
Q 012755 160 EHWVYLACI-LMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLA-VGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMN 237 (457)
Q Consensus 160 ~~~l~~~~~-~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp 237 (457)
++.+|+... ...+..||+. .+...+. ++...... ..++. .++.+|+... ....+.+||+. +++.......
T Consensus 30 ~g~l~v~~~~~~~v~~~~~~-~~~~~~~-~~~~~~~~---~~i~~~~~g~l~v~~~--~~~~v~~~d~~-g~~~~~~~~~ 101 (300)
T 2qc5_A 30 DGKVWFTQHKANKISSLDQS-GRIKEFE-VPTPDAKV---MCLIVSSLGDIWFTEN--GANKIGKLSKK-GGFTEYPLPQ 101 (300)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEEEEE-CSSTTCCE---EEEEECTTSCEEEEET--TTTEEEEECTT-SCEEEEECSS
T ss_pred CCCEEEEcCCCCeEEEECCC-CceEEEE-CCCCCCcc---eeEEECCCCCEEEEec--CCCeEEEECCC-CCeEEecCCC
Confidence 456777653 4678899988 6665432 12110111 11222 3567887542 23579999998 6665442111
Q ss_pred CCccceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE--CCEEEEEeccCCCCCCCc
Q 012755 238 LPRCLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLT 314 (457)
Q Consensus 238 ~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~ 314 (457)
.....++++.- ++.+|+.... ...+.+||+. ++..... ++........... +|++|+... ...
T Consensus 102 ~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~------~~~ 167 (300)
T 2qc5_A 102 PDSGPYGITEGLNGDIWFTQLN------GDRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTEN------QNN 167 (300)
T ss_dssp TTCCEEEEEECSTTCEEEEETT------TTEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEET------TTT
T ss_pred CCCCCccceECCCCCEEEEccC------CCeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEec------CCC
Confidence 11222333333 6788886431 2468889987 6655432 1211112222223 577888642 134
Q ss_pred eEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCC
Q 012755 315 CGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFN 392 (457)
Q Consensus 315 ~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~ 392 (457)
.+.+||+ +++...+.. +. ....+..+.+ +|.||+.....+.+.+||+ ++++.... .+....
T Consensus 168 ~i~~~~~-~g~~~~~~~-~~----------~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~-~~~~~~--- 230 (300)
T 2qc5_A 168 SIGRITN-TGKLEEYPL-PT----------NAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYD-IPTPNA--- 230 (300)
T ss_dssp EEEEECT-TCCEEEEEC-SS----------TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEE-CSSTTC---
T ss_pred eEEEECC-CCcEEEeeC-CC----------CCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEE-CCCCCC---
Confidence 6889998 667665432 11 1112222333 6789988766678999999 66666543 221111
Q ss_pred cceEEEEE-eCCEEEEEcCcCCCCCceEEEEEeeCC
Q 012755 393 GWGLAFKA-CGNSLLVIGGHRELQGEIIVLHSWDPT 427 (457)
Q Consensus 393 ~~~~~~~~-~~g~lyv~GG~~~~~~~~~~v~~y~~~ 427 (457)
. -..++. -+|+||+..... ..+..|+++
T Consensus 231 ~-~~~i~~d~~g~l~v~~~~~------~~i~~~~~~ 259 (300)
T 2qc5_A 231 R-PHAITAGKNSEIWFTEWGA------NQIGRITND 259 (300)
T ss_dssp C-EEEEEECSTTCEEEEETTT------TEEEEECTT
T ss_pred C-ceEEEECCCCCEEEeccCC------CeEEEECCC
Confidence 1 112322 367888876321 147778873
No 42
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.26 E-value=0.0075 Score=58.35 Aligned_cols=185 Identities=13% Similarity=0.059 Sum_probs=98.5
Q ss_pred EEEEEec-CccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeC-CEEEEEceecCCcEEEEEECCCCcEEeCCCCCCC
Q 012755 162 WVYLACI-LMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVG-TQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLP 239 (457)
Q Consensus 162 ~l~~~~~-~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~-~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~ 239 (457)
.+|+.+. ...+..+|..+.+-...-..... .. ......+ ..||+.++.. ..+.+||..+++....-..+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~--~~---~~~~s~dg~~l~~~~~~d--~~i~v~d~~~~~~~~~~~~~~- 74 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGSN--PM---GAVISPDGTKVYVANAHS--NDVSIIDTATNNVIATVPAGS- 74 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSS--EE---EEEECTTSSEEEEEEGGG--TEEEEEETTTTEEEEEEECSS-
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCCC--cc---eEEECCCCCEEEEECCCC--CeEEEEECCCCeEEEEEECCC-
Confidence 4555543 56788899877654322111110 00 0112223 4566766432 479999998887644322222
Q ss_pred ccceeEEee--CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE-CC-EEEEEeccCCCCCCCce
Q 012755 240 RCLFGSSSL--GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM-DG-KFYIIGGMSSPTDPLTC 315 (457)
Q Consensus 240 r~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g-~iyv~GG~~~~~~~~~~ 315 (457)
.-.+++.. +..||+.+.. ...+.+||..+++-...-.. ......++.. ++ .+|+.++. ...
T Consensus 75 -~v~~~~~spdg~~l~~~~~~------~~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~------~~~ 139 (391)
T 1l0q_A 75 -SPQGVAVSPDGKQVYVTNMA------SSTLSVIDTTSNTVAGTVKT--GKSPLGLALSPDGKKLYVTNNG------DKT 139 (391)
T ss_dssp -SEEEEEECTTSSEEEEEETT------TTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEETT------TTE
T ss_pred -CccceEECCCCCEEEEEECC------CCEEEEEECCCCeEEEEEeC--CCCcceEEECCCCCEEEEEeCC------CCE
Confidence 22222222 4456665432 25799999998875433221 1112223332 34 57676643 347
Q ss_pred EEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-CC-EEEEEecCCCeEEEEECCCCcEEEe
Q 012755 316 GEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV-NN-QLYSADQATNVVKKYNKTNNSWTVV 381 (457)
Q Consensus 316 ~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~g-~ly~~gg~~~~v~~Yd~~~~~W~~v 381 (457)
+.+||+.+++....-.... ....++.. ++ .||+.+...+.+..||..+++-...
T Consensus 140 v~~~d~~~~~~~~~~~~~~------------~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 195 (391)
T 1l0q_A 140 VSVINTVTKAVINTVSVGR------------SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDT 195 (391)
T ss_dssp EEEEETTTTEEEEEEECCS------------SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEEECCCCcEEEEEecCC------------CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEE
Confidence 8999998887654322111 11122222 34 6777777778999999988765433
No 43
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.23 E-value=0.06 Score=50.81 Aligned_cols=194 Identities=10% Similarity=0.031 Sum_probs=95.6
Q ss_pred CCEEEEEceec----CCcEEEEEECCCCcEEeCCCCCCCccceeEEe--eCCEEEEEeeecCCCCccceEEEEeCCCCcE
Q 012755 205 GTQLLVFGREL----SGFAIWMYSLIANCWSKCPQMNLPRCLFGSSS--LGEVAIVAGGTDKNGCILKSAELYNSELGTW 278 (457)
Q Consensus 205 ~~~lyv~GG~~----~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W 278 (457)
++.+|+..... ....++++|+.+++-...-+.... .+.++. -++.+|+.++. ...+.++|+.+++-
T Consensus 52 g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~ 123 (353)
T 3vgz_A 52 ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLK--PFGATINNTTQTLWFGNTV------NSAVTAIDAKTGEV 123 (353)
T ss_dssp TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSC--CCSEEEETTTTEEEEEETT------TTEEEEEETTTCCE
T ss_pred CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCC--cceEEECCCCCEEEEEecC------CCEEEEEeCCCCee
Confidence 34666655321 145799999988765432111111 122222 24558877542 24789999998874
Q ss_pred EECCCCCCC--------CcceeEEEE-C-CEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCC
Q 012755 279 ETLPDMNLP--------RKLCSGFFM-D-GKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSP 348 (457)
Q Consensus 279 ~~~~~~p~~--------r~~~~~~~~-~-g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~ 348 (457)
...-+.+.. .....++.. + +.+|+.+... ...+.+||+.+.+-...-+... ...
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~~~d~~~~~~~~~~~~~~-----------~~~ 187 (353)
T 3vgz_A 124 KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-----ESVIWVVDGGNIKLKTAIQNTG-----------KMS 187 (353)
T ss_dssp EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-----SCEEEEEETTTTEEEEEECCCC-----------TTC
T ss_pred EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-----CceEEEEcCCCCceEEEecCCC-----------Ccc
Confidence 221111110 111223332 3 4577765221 3468999998775433222111 111
Q ss_pred CEEEE-ECC-EEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeC
Q 012755 349 PLVAV-VNN-QLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDP 426 (457)
Q Consensus 349 ~~~~~-~~g-~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~ 426 (457)
..++. -+| .+|+.. ..+.+..||+.+.+=......+.........++++...++.||+..... ..+.+||+
T Consensus 188 ~~~~~s~dg~~l~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------~~v~~~d~ 260 (353)
T 3vgz_A 188 TGLALDSEGKRLYTTN-ADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKA------AEVLVVDT 260 (353)
T ss_dssp CCCEEETTTTEEEEEC-TTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSS------SEEEEEET
T ss_pred ceEEECCCCCEEEEEc-CCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCC------CEEEEEEC
Confidence 12222 244 456554 4678999999887533322221111111011222222355677765332 25888998
Q ss_pred CCC
Q 012755 427 TDG 429 (457)
Q Consensus 427 ~~~ 429 (457)
.+.
T Consensus 261 ~~~ 263 (353)
T 3vgz_A 261 RNG 263 (353)
T ss_dssp TTC
T ss_pred CCC
Confidence 774
No 44
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.22 E-value=0.0022 Score=61.28 Aligned_cols=187 Identities=11% Similarity=0.006 Sum_probs=92.7
Q ss_pred EEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCC-CccceeEE-eeC
Q 012755 172 WEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNL-PRCLFGSS-SLG 249 (457)
Q Consensus 172 ~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~-~r~~~~~~-~~~ 249 (457)
++.+|+.+.++..+.......... ...+..++.||+.+.......+++||..+++++.+..+.. ...-..++ .-+
T Consensus 20 v~~~d~~tg~~~~~~~~~~~~~p~---~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spd 96 (347)
T 3hfq_A 20 QGTLDTTAKTLTNDGLLAATQNPT---YLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEA 96 (347)
T ss_dssp EEEEETTTTEEEEEEEEEECSCCC---CEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETT
T ss_pred EEEEcCCCCeEEEeeeeeccCCcc---eEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCC
Confidence 567788777776543211110001 1123346777776644334679999998888766543211 11111222 223
Q ss_pred -CEEEEEeeecCCCCccceEEEEeCC-CCcEEECCC------CCCCCc----ceeEEE-ECCEEEEEeccCCCCCCCceE
Q 012755 250 -EVAIVAGGTDKNGCILKSAELYNSE-LGTWETLPD------MNLPRK----LCSGFF-MDGKFYIIGGMSSPTDPLTCG 316 (457)
Q Consensus 250 -~~iyv~GG~~~~~~~~~~v~~yd~~-t~~W~~~~~------~p~~r~----~~~~~~-~~g~iyv~GG~~~~~~~~~~~ 316 (457)
..+|+.+.. ...+.+||.. +++.+.+.. -|.+|. .+.++. -+|++|+.+.. ...+
T Consensus 97 g~~l~~~~~~------~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~------~~~v 164 (347)
T 3hfq_A 97 RQLVYSANYH------KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG------SDKV 164 (347)
T ss_dssp TTEEEEEETT------TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT------TTEE
T ss_pred CCEEEEEeCC------CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC------CCEE
Confidence 456665421 2457777764 334333211 111111 112222 26777776432 2468
Q ss_pred EEEECC-CCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCE-EEEEecCCCeEEEEECC--CCcEEEec
Q 012755 317 EEYNLE-TRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQ-LYSADQATNVVKKYNKT--NNSWTVVK 382 (457)
Q Consensus 317 ~~yd~~-t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~-ly~~gg~~~~v~~Yd~~--~~~W~~v~ 382 (457)
.+||+. +++...+...... ....+..+++ +|+ ||+.+...+.+.+|+.+ +++++.+.
T Consensus 165 ~~~~~~~~g~~~~~~~~~~~---------~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~ 227 (347)
T 3hfq_A 165 YVYNVSDAGQLSEQSVLTME---------AGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLG 227 (347)
T ss_dssp EEEEECTTSCEEEEEEEECC---------TTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCcEEEeeeEEcC---------CCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEee
Confidence 889988 5666544322110 0111112223 555 88877666777777655 56776554
No 45
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.21 E-value=0.034 Score=51.64 Aligned_cols=248 Identities=13% Similarity=-0.002 Sum_probs=124.5
Q ss_pred cEEEEEe-cCccEEEEeCCCC--cEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCc--EEeCCC
Q 012755 161 HWVYLAC-ILMPWEAFDPLRQ--RWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANC--WSKCPQ 235 (457)
Q Consensus 161 ~~l~~~~-~~~~~~~ydp~~~--~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~--W~~l~~ 235 (457)
+.+++.+ +...+.++|+++. .|+.-..-. ...+. ..+..++.+++.+ .+.+..||+ +++ |+.-.+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~--~~~~~---~~~~pdG~ilvs~----~~~V~~~d~-~G~~~W~~~~~ 74 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKG--WECNS---VAATKAGEILFSY----SKGAKMITR-DGRELWNIAAP 74 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTT--CCCCE---EEECTTSCEEEEC----BSEEEEECT-TSCEEEEEECC
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCcc--CCCcC---eEECCCCCEEEeC----CCCEEEECC-CCCEEEEEcCC
Confidence 3444443 3667788998666 364322110 01111 1234577787733 346899999 553 654332
Q ss_pred CCCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCc-EEEC--CCCCCC--CcceeEEEECCEEEEEeccCCC
Q 012755 236 MNLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGT-WETL--PDMNLP--RKLCSGFFMDGKFYIIGGMSSP 309 (457)
Q Consensus 236 lp~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~-W~~~--~~~p~~--r~~~~~~~~~g~iyv~GG~~~~ 309 (457)
.....+++.. -++++++....+ ...+..+|+..+. |+.. ...+.+ .........+|.+++...
T Consensus 75 --~~~~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~---- 143 (276)
T 3no2_A 75 --AGCEMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF---- 143 (276)
T ss_dssp --TTCEEEEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEET----
T ss_pred --CCccccccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEec----
Confidence 1112233333 366776664421 2467888885442 5432 111111 111223344677776543
Q ss_pred CCCCceEEEEECCCC-ceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCC--cEEEec-cC
Q 012755 310 TDPLTCGEEYNLETR-TWKRIENMYPSNVGTQSNPAMSSPPLVAVV-NNQLYSADQATNVVKKYNKTNN--SWTVVK-RL 384 (457)
Q Consensus 310 ~~~~~~~~~yd~~t~-~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~g~ly~~gg~~~~v~~Yd~~~~--~W~~v~-~~ 384 (457)
....+.+||++-+ .|+.-.... .+++... +|.+++.+...+.|..+|++++ .|+.-. ..
T Consensus 144 --~~~~v~~~d~~G~~~w~~~~~~~--------------~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~ 207 (276)
T 3no2_A 144 --ATSEVREIAPNGQLLNSVKLSGT--------------PFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDI 207 (276)
T ss_dssp --TTTEEEEECTTSCEEEEEECSSC--------------CCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGS
T ss_pred --CCCEEEEECCCCCEEEEEECCCC--------------ccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCC
Confidence 2356899999832 365432211 1233333 7888888776678999999965 476543 22
Q ss_pred CCccCCCCcceEEEEEeCCEEEEEc--CcCC---CCCceEEEEEeeCCCCCCCCCCeeEeccccccCceEEeee
Q 012755 385 PVRANSFNGWGLAFKACGNSLLVIG--GHRE---LQGEIIVLHSWDPTDGNSGEAQWNELAVRERAGAFVYNCA 453 (457)
Q Consensus 385 p~~~~~~~~~~~~~~~~~g~lyv~G--G~~~---~~~~~~~v~~y~~~~~~w~~~~W~~l~~~~~~~~~~~~~~ 453 (457)
+..+. ..........+|.+||.. |+.. ..+. ..+...++ + +++-|+ ......++....-|.
T Consensus 208 ~~~~l--~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~-~~~~~~~~--~--g~~~W~-~~~~~~~~~~~~~~~ 273 (276)
T 3no2_A 208 EGVQL--FFVAQLFPLQNGGLYICNWQGHDREAGKGKH-PQLVEIDS--E--GKVVWQ-LNDKVKFGMISTICP 273 (276)
T ss_dssp BSCCC--SEEEEEEECTTSCEEEEEECTTCTTGGGSCC-CSEEEECT--T--SBEEEE-ECCTTTSCCCCEEEE
T ss_pred CCccc--cccccceEcCCCCEEEEeccCccccccccCC-ceEEEECC--C--CCEEEE-ecCcccccceeeeee
Confidence 22111 011222334588999987 6542 0001 12333454 3 566786 344334554443343
No 46
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.19 E-value=0.08 Score=52.22 Aligned_cols=231 Identities=12% Similarity=0.105 Sum_probs=119.1
Q ss_pred cEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCc
Q 012755 161 HWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPR 240 (457)
Q Consensus 161 ~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r 240 (457)
..++..+....+..||..+.+-... +. .+...-..+..++..++.|+.. ..+.+||..+.+-... +....
T Consensus 210 ~~l~s~s~dg~i~~wd~~~~~~~~~--~~----~~~~~v~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~--~~~~~ 279 (445)
T 2ovr_B 210 KRVVSGSRDATLRVWDIETGQCLHV--LM----GHVAAVRCVQYDGRRVVSGAYD--FMVKVWDPETETCLHT--LQGHT 279 (445)
T ss_dssp TEEEEEETTSEEEEEESSSCCEEEE--EE----CCSSCEEEEEECSSCEEEEETT--SCEEEEEGGGTEEEEE--ECCCS
T ss_pred CEEEEEeCCCEEEEEECCCCcEEEE--Ec----CCcccEEEEEECCCEEEEEcCC--CEEEEEECCCCcEeEE--ecCCC
Confidence 3444444456677888766543211 00 0111111234466666666543 3588889877653321 11111
Q ss_pred cceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEE
Q 012755 241 CLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYN 320 (457)
Q Consensus 241 ~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd 320 (457)
........++..++.|+.+ ..+.+||..+++-... +............++...+.|+.+ ..+..||
T Consensus 280 ~~v~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d------g~i~vwd 345 (445)
T 2ovr_B 280 NRVYSLQFDGIHVVSGSLD------TSIRVWDVETGNCIHT--LTGHQSLTSGMELKDNILVSGNAD------STVKIWD 345 (445)
T ss_dssp SCEEEEEECSSEEEEEETT------SCEEEEETTTCCEEEE--ECCCCSCEEEEEEETTEEEEEETT------SCEEEEE
T ss_pred CceEEEEECCCEEEEEeCC------CeEEEEECCCCCEEEE--EcCCcccEEEEEEeCCEEEEEeCC------CeEEEEE
Confidence 1112233366666777644 4588899988763321 111112222334455566666543 3578899
Q ss_pred CCCCceEE-cCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCcEEEec-cCCCccCCCCcceEEE
Q 012755 321 LETRTWKR-IENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQATNVVKKYNKTNNSWTVVK-RLPVRANSFNGWGLAF 398 (457)
Q Consensus 321 ~~t~~W~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~~W~~v~-~~p~~~~~~~~~~~~~ 398 (457)
..+++-.. +..... .......+..++.+++.|+..+.|..||..+++....- ...... +...-..+
T Consensus 346 ~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~--~~~~v~~~ 413 (445)
T 2ovr_B 346 IKTGQCLQTLQGPNK----------HQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGG--SGGVVWRI 413 (445)
T ss_dssp TTTCCEEEEECSTTS----------CSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGG--GTCEEEEE
T ss_pred CCCCcEEEEEccCCC----------CCCCEEEEEECCCEEEEEeCCCeEEEEECCCCceeeeeeccccCC--CCceEEEE
Confidence 88765322 221111 22223345567888888888899999999987654321 111111 10111122
Q ss_pred EE-eCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 399 KA-CGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 399 ~~-~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
.. -++.++++|+.++... ..+++||.+.+
T Consensus 414 ~~s~~~~~la~~~~dg~~~--~~l~v~df~~~ 443 (445)
T 2ovr_B 414 RASNTKLVCAVGSRNGTEE--TKLLVLDFDVD 443 (445)
T ss_dssp EECSSEEEEEEECSSSSSC--CEEEEEECCCC
T ss_pred EecCCEEEEEEcccCCCCc--cEEEEEECCCC
Confidence 22 3567778888776432 35777777653
No 47
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.18 E-value=0.1 Score=47.86 Aligned_cols=220 Identities=8% Similarity=-0.010 Sum_probs=116.1
Q ss_pred ccEEEEEec-CccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEE-eCCEEEEEceecCCcEEEEEECCCCcEEeCCCCC
Q 012755 160 EHWVYLACI-LMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLA-VGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMN 237 (457)
Q Consensus 160 ~~~l~~~~~-~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp 237 (457)
++.+|+... ...+..||+. .++..+. ++...... ..++. .++.+|+... ....+.+||+. ++..... ++
T Consensus 72 ~g~l~v~~~~~~~v~~~d~~-g~~~~~~-~~~~~~~~---~~i~~~~~g~l~v~~~--~~~~i~~~~~~-g~~~~~~-~~ 142 (300)
T 2qc5_A 72 LGDIWFTENGANKIGKLSKK-GGFTEYP-LPQPDSGP---YGITEGLNGDIWFTQL--NGDRIGKLTAD-GTIYEYD-LP 142 (300)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEEEEE-CSSTTCCE---EEEEECSTTCEEEEET--TTTEEEEECTT-SCEEEEE-CS
T ss_pred CCCEEEEecCCCeEEEECCC-CCeEEec-CCCCCCCC---ccceECCCCCEEEEcc--CCCeEEEECCC-CCEEEcc-CC
Confidence 455776654 4668899987 6665432 11111111 11222 3577887642 23478999988 6655432 11
Q ss_pred -CCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE--CCEEEEEeccCCCCCCC
Q 012755 238 -LPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPL 313 (457)
Q Consensus 238 -~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~ 313 (457)
......+++. -++++|+.... ...+.+||+ +++..... .+..........+ +|.+|+... ..
T Consensus 143 ~~~~~~~~i~~d~~g~l~v~~~~------~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~------~~ 208 (300)
T 2qc5_A 143 NKGSYPAFITLGSDNALWFTENQ------NNSIGRITN-TGKLEEYP-LPTNAAAPVGITSGNDGALWFVEI------MG 208 (300)
T ss_dssp STTCCEEEEEECTTSSEEEEETT------TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEET------TT
T ss_pred CCCCCceeEEECCCCCEEEEecC------CCeEEEECC-CCcEEEee-CCCCCCCcceEEECCCCCEEEEcc------CC
Confidence 1111223333 25678886421 246889998 67766542 2222222223333 578998642 13
Q ss_pred ceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCC
Q 012755 314 TCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSF 391 (457)
Q Consensus 314 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~ 391 (457)
..+.+||+ ++++..... +. ....+..+.+ +|+||+.....+.+.+||+ +++..... ++......
T Consensus 209 ~~i~~~~~-~g~~~~~~~-~~----------~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~-~~~~~~~~ 274 (300)
T 2qc5_A 209 NKIGRITT-TGEISEYDI-PT----------PNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQ-LQTENAEP 274 (300)
T ss_dssp TEEEEECT-TCCEEEEEC-SS----------TTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEE-CCSTTCCC
T ss_pred CEEEEEcC-CCcEEEEEC-CC----------CCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEE-CCccCCcc
Confidence 46888998 666665432 11 1112223333 6789988766689999999 45665543 22111111
Q ss_pred CcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCC
Q 012755 392 NGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPT 427 (457)
Q Consensus 392 ~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~ 427 (457)
.++ +..-+|+||+... . .+..++|+
T Consensus 275 --~~i-~~~~~g~l~v~~~-~-------~i~~~~p~ 299 (300)
T 2qc5_A 275 --HGI-TFGKDGSVWFALK-C-------KIGKLNLN 299 (300)
T ss_dssp --CCE-EECTTSCEEEECS-S-------EEEEEEEC
T ss_pred --cee-EeCCCCCEEEEcc-C-------ceEEeCCC
Confidence 112 2223678888653 1 36677774
No 48
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.13 E-value=0.14 Score=53.92 Aligned_cols=118 Identities=14% Similarity=0.101 Sum_probs=73.6
Q ss_pred EEeCCEEEEEceecCCcEEEEEECCCCc--EEeCCCCCCC--------ccceeEEeeCCEEEEEeeecCCCCccceEEEE
Q 012755 202 LAVGTQLLVFGRELSGFAIWMYSLIANC--WSKCPQMNLP--------RCLFGSSSLGEVAIVAGGTDKNGCILKSAELY 271 (457)
Q Consensus 202 ~~~~~~lyv~GG~~~~~~v~~yd~~t~~--W~~l~~lp~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~y 271 (457)
++.++.||+... ...++.+|..|++ |+.-...+.. ....+.+..+++||+... ...+..+
T Consensus 74 ~v~~g~vyv~~~---~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~-------dg~l~al 143 (677)
T 1kb0_A 74 VVVDGIMYVSAS---WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-------DGRLIAL 143 (677)
T ss_dssp EEETTEEEEECG---GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-------TSEEEEE
T ss_pred EEECCEEEEECC---CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC-------CCEEEEE
Confidence 667999999765 2468999998775 8765433211 112234567888888632 2578999
Q ss_pred eCCCCc--EEECCC--CCC-CCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCc--eEEcC
Q 012755 272 NSELGT--WETLPD--MNL-PRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRT--WKRIE 330 (457)
Q Consensus 272 d~~t~~--W~~~~~--~p~-~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~ 330 (457)
|.+|++ |+.-.. .+. .....+.++.++++|+..+... ......+..||.+|++ |+.-.
T Consensus 144 D~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~-~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 144 DAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAE-YGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp ETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTT-TCCBCEEEEEETTTCCEEEEEES
T ss_pred ECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccc-cCCCCEEEEEECCCCcEEEEecc
Confidence 999886 886432 111 1122344567999988543221 1124678999999875 87543
No 49
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.09 E-value=0.0087 Score=57.90 Aligned_cols=182 Identities=13% Similarity=0.077 Sum_probs=98.0
Q ss_pred EEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEee--CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCC
Q 012755 207 QLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSSL--GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDM 284 (457)
Q Consensus 207 ~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~ 284 (457)
.+|+.|+. ...+.+||..+++-...-.... ...+++.. +..+|+.|+.+ ..+.++|..+++-...-..
T Consensus 3 ~l~vs~~~--d~~v~v~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~d------~~i~v~d~~~~~~~~~~~~ 72 (391)
T 1l0q_A 3 FAYIANSE--SDNISVIDVTSNKVTATIPVGS--NPMGAVISPDGTKVYVANAHS------NDVSIIDTATNNVIATVPA 72 (391)
T ss_dssp EEEEEETT--TTEEEEEETTTTEEEEEEECSS--SEEEEEECTTSSEEEEEEGGG------TEEEEEETTTTEEEEEEEC
T ss_pred EEEEEcCC--CCEEEEEECCCCeEEEEeecCC--CcceEEECCCCCEEEEECCCC------CeEEEEECCCCeEEEEEEC
Confidence 45666543 3478999998876543211111 11223222 34577776533 4788999988875443222
Q ss_pred CCCCcceeEEEE-CC-EEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-CC-EEEE
Q 012755 285 NLPRKLCSGFFM-DG-KFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV-NN-QLYS 360 (457)
Q Consensus 285 p~~r~~~~~~~~-~g-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~g-~ly~ 360 (457)
+. .-..++.. ++ .||+.+.. ...+.+||+.+++-...-... .....++.. ++ .||+
T Consensus 73 ~~--~v~~~~~spdg~~l~~~~~~------~~~v~v~d~~~~~~~~~~~~~------------~~~~~~~~s~dg~~l~~ 132 (391)
T 1l0q_A 73 GS--SPQGVAVSPDGKQVYVTNMA------SSTLSVIDTTSNTVAGTVKTG------------KSPLGLALSPDGKKLYV 132 (391)
T ss_dssp SS--SEEEEEECTTSSEEEEEETT------TTEEEEEETTTTEEEEEEECS------------SSEEEEEECTTSSEEEE
T ss_pred CC--CccceEECCCCCEEEEEECC------CCEEEEEECCCCeEEEEEeCC------------CCcceEEECCCCCEEEE
Confidence 21 22222222 34 46665432 246899999988654332211 111223322 34 5778
Q ss_pred EecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 361 ADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 361 ~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
.+...+.+..||..+++....-...... ..+++...+..||+.++.++ .+.+||..++
T Consensus 133 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~-----~~~~~~~dg~~l~~~~~~~~------~v~~~d~~~~ 190 (391)
T 1l0q_A 133 TNNGDKTVSVINTVTKAVINTVSVGRSP-----KGIAVTPDGTKVYVANFDSM------SISVIDTVTN 190 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECCSSE-----EEEEECTTSSEEEEEETTTT------EEEEEETTTT
T ss_pred EeCCCCEEEEEECCCCcEEEEEecCCCc-----ceEEECCCCCEEEEEeCCCC------EEEEEECCCC
Confidence 8877889999999988765443221111 11111112346777765542 5888888764
No 50
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.08 E-value=0.076 Score=49.70 Aligned_cols=243 Identities=10% Similarity=0.038 Sum_probs=112.4
Q ss_pred cEEEEEecC-ccEEEEeCC--CCcEEeCCCCCCCccccCCCeeeEEeCC-EEEEEceecCCcEEEEEECCCCc-EEeCCC
Q 012755 161 HWVYLACIL-MPWEAFDPL--RQRWMRLPRMQCDECFTSADKESLAVGT-QLLVFGRELSGFAIWMYSLIANC-WSKCPQ 235 (457)
Q Consensus 161 ~~l~~~~~~-~~~~~ydp~--~~~W~~l~~~p~~~~~~~~~~~~~~~~~-~lyv~GG~~~~~~v~~yd~~t~~-W~~l~~ 235 (457)
..+|+.+.. ..+..||.. +.++..+..++...... ......++ .+|+.+. ....+.+||...+. ...+..
T Consensus 50 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~s~dg~~l~~~~~--~~~~i~~~d~~~~~~~~~~~~ 124 (343)
T 1ri6_A 50 RYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLT---HISTDHQGQFVFVGSY--NAGNVSVTRLEDGLPVGVVDV 124 (343)
T ss_dssp SEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCS---EEEECTTSSEEEEEET--TTTEEEEEEEETTEEEEEEEE
T ss_pred CEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCc---EEEEcCCCCEEEEEec--CCCeEEEEECCCCcccccccc
Confidence 446665543 566676665 66666544332211111 11122334 4666543 23467888873221 111111
Q ss_pred CCCCccceeEEee--CCEEEEEeeecCCCCccceEEEEeCCC-CcEEECC----CCCCCCcceeEEEE--CC-EEEEEec
Q 012755 236 MNLPRCLFGSSSL--GEVAIVAGGTDKNGCILKSAELYNSEL-GTWETLP----DMNLPRKLCSGFFM--DG-KFYIIGG 305 (457)
Q Consensus 236 lp~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~yd~~t-~~W~~~~----~~p~~r~~~~~~~~--~g-~iyv~GG 305 (457)
.+.....+.++.- +..+|+.+.. ...+.+||..+ ++...+. ..+... ....+.+ ++ .+|+.+.
T Consensus 125 ~~~~~~~~~~~~s~dg~~l~~~~~~------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pdg~~l~~~~~ 197 (343)
T 1ri6_A 125 VEGLDGCHSANISPDNRTLWVPALK------QDRICLFTVSDDGHLVAQDPAEVTTVEGA-GPRHMVFHPNEQYAYCVNE 197 (343)
T ss_dssp ECCCTTBCCCEECTTSSEEEEEEGG------GTEEEEEEECTTSCEEEEEEEEEECSTTC-CEEEEEECTTSSEEEEEET
T ss_pred ccCCCCceEEEECCCCCEEEEecCC------CCEEEEEEecCCCceeeecccccccCCCC-CcceEEECCCCCEEEEEeC
Confidence 1111111222222 3467766422 24688899887 6665322 111111 1112222 44 4777653
Q ss_pred cCCCCCCCceEEEEECC--CCceEEcC---CCCCCCCCCCCCCCCCCCCEEEEE--CC-EEEEEecCCCeEEEEECC--C
Q 012755 306 MSSPTDPLTCGEEYNLE--TRTWKRIE---NMYPSNVGTQSNPAMSSPPLVAVV--NN-QLYSADQATNVVKKYNKT--N 375 (457)
Q Consensus 306 ~~~~~~~~~~~~~yd~~--t~~W~~~~---~~~~~~~~~~~~~~~r~~~~~~~~--~g-~ly~~gg~~~~v~~Yd~~--~ 375 (457)
. ...+.+||.. ++++..+. ..+. ..........+.+ +| .||+.+...+.+.+||.+ +
T Consensus 198 ~------~~~i~~~~~~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~ 264 (343)
T 1ri6_A 198 L------NSSVDVWELKDPHGNIECVQTLDMMPE-------NFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDG 264 (343)
T ss_dssp T------TTEEEEEESSCTTSCCEEEEEEECSCT-------TCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS
T ss_pred C------CCEEEEEEecCCCCcEEEEeeccccCc-------cccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCC
Confidence 2 3467888884 45554332 2221 0001112222333 34 677776667889999987 5
Q ss_pred CcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCCCCCCCCeeEec
Q 012755 376 NSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDGNSGEAQWNELA 440 (457)
Q Consensus 376 ~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~~w~~~~W~~l~ 440 (457)
++++.+...+.... . .++++..-+..||+.++.++ ...++..|++++ +++++.
T Consensus 265 ~~~~~~~~~~~~~~-~--~~~~~s~dg~~l~~~~~~~~----~v~v~~~d~~~g-----~~~~~~ 317 (343)
T 1ri6_A 265 SVLSKEGFQPTETQ-P--RGFNVDHSGKYLIAAGQKSH----HISVYEIVGEQG-----LLHEKG 317 (343)
T ss_dssp CCEEEEEEEECSSS-C--CCEEECTTSSEEEEECTTTC----EEEEEEEETTTT-----EEEEEE
T ss_pred CceEEeeeecCCCc-c--ceEEECCCCCEEEEecCCCC----eEEEEEEcCCCc-----eeeEcc
Confidence 67777765543322 1 12222222345666554332 223444477665 455554
No 51
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.07 E-value=0.047 Score=50.76 Aligned_cols=235 Identities=7% Similarity=0.000 Sum_probs=117.2
Q ss_pred ccEEEEE--------ecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEE-eC-CEEEEEceecCCcEEEEEECCCCc
Q 012755 160 EHWVYLA--------CILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLA-VG-TQLLVFGRELSGFAIWMYSLIANC 229 (457)
Q Consensus 160 ~~~l~~~--------~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~-~~-~~lyv~GG~~~~~~v~~yd~~t~~ 229 (457)
++.+|+. .....+..||+.+.++..+.. +...........++. .+ +.+|+... ...+++||+. ++
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~g~l~v~~~---~~~l~~~d~~-g~ 102 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICK-PEVNGYGGIPAGCQCDRDANQLFVADM---RLGLLVVQTD-GT 102 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEEC-CEETTEECCEEEEEECSSSSEEEEEET---TTEEEEEETT-SC
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEe-cccCCCCCCCceEEEecCCCcEEEEEC---CCCEEEEeCC-CC
Confidence 4456665 235678899988888765432 100000000011222 34 78888653 2379999998 77
Q ss_pred EEeC-CCCCCC---ccceeEEe-eCCEEEEEeeecC---------CCCccceEEEEeCCCCcEEECCC-CCCCCcceeEE
Q 012755 230 WSKC-PQMNLP---RCLFGSSS-LGEVAIVAGGTDK---------NGCILKSAELYNSELGTWETLPD-MNLPRKLCSGF 294 (457)
Q Consensus 230 W~~l-~~lp~~---r~~~~~~~-~~~~iyv~GG~~~---------~~~~~~~v~~yd~~t~~W~~~~~-~p~~r~~~~~~ 294 (457)
...+ ...... ..-..++. -++.+|+...... .......+++||+. ++...+.. ... ....+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~---~~~i~ 178 (314)
T 1pjx_A 103 FEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQF---PNGIA 178 (314)
T ss_dssp EEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESS---EEEEE
T ss_pred EEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCC---cceEE
Confidence 7665 322111 11122322 2678888654220 11122578899987 55544311 111 12233
Q ss_pred EE-----CC-EEEEEeccCCCCCCCceEEEEECC-CCceEEc---CCCCCCCCCCCCCCCC-CCCCEEEEE-CCEEEEEe
Q 012755 295 FM-----DG-KFYIIGGMSSPTDPLTCGEEYNLE-TRTWKRI---ENMYPSNVGTQSNPAM-SSPPLVAVV-NNQLYSAD 362 (457)
Q Consensus 295 ~~-----~g-~iyv~GG~~~~~~~~~~~~~yd~~-t~~W~~~---~~~~~~~~~~~~~~~~-r~~~~~~~~-~g~ly~~g 362 (457)
.. ++ .+|+.... ...+.+||+. +++.... ...+. .. .....++.- +|.||+..
T Consensus 179 ~~~~~d~dg~~l~v~~~~------~~~i~~~~~~~~g~~~~~~~~~~~~~---------~~~~~p~~i~~d~~G~l~v~~ 243 (314)
T 1pjx_A 179 VRHMNDGRPYQLIVAETP------TKKLWSYDIKGPAKIENKKVWGHIPG---------THEGGADGMDFDEDNNLLVAN 243 (314)
T ss_dssp EEECTTSCEEEEEEEETT------TTEEEEEEEEETTEEEEEEEEEECCC---------CSSCEEEEEEEBTTCCEEEEE
T ss_pred EecccCCCCCEEEEEECC------CCeEEEEECCCCCccccceEEEECCC---------CCCCCCCceEECCCCCEEEEE
Confidence 33 34 57776421 3568889876 4443321 11111 00 111122222 68899887
Q ss_pred cCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCE-EEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 363 QATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNS-LLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 363 g~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~-lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
...+.|.+||+++++-...-..+... -.++++ .-+++ ||+.....+ .++.|+++..
T Consensus 244 ~~~~~i~~~d~~~g~~~~~~~~~~~~----~~~i~~-~~dg~~l~v~~~~~~------~l~~~~~~~~ 300 (314)
T 1pjx_A 244 WGSSHIEVFGPDGGQPKMRIRCPFEK----PSNLHF-KPQTKTIFVTEHENN------AVWKFEWQRN 300 (314)
T ss_dssp ETTTEEEEECTTCBSCSEEEECSSSC----EEEEEE-CTTSSEEEEEETTTT------EEEEEECSSC
T ss_pred cCCCEEEEEcCCCCcEeEEEeCCCCC----ceeEEE-CCCCCEEEEEeCCCC------eEEEEeCCCC
Confidence 56678999999854322211222111 111221 23454 888664431 5888998764
No 52
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.07 E-value=0.13 Score=53.18 Aligned_cols=118 Identities=13% Similarity=0.154 Sum_probs=71.9
Q ss_pred EEeCCEEEEEceecCCcEEEEEEC-CCCc--EEeCCCCCCC--------ccceeEEeeCCEEEEEeeecCCCCccceEEE
Q 012755 202 LAVGTQLLVFGRELSGFAIWMYSL-IANC--WSKCPQMNLP--------RCLFGSSSLGEVAIVAGGTDKNGCILKSAEL 270 (457)
Q Consensus 202 ~~~~~~lyv~GG~~~~~~v~~yd~-~t~~--W~~l~~lp~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~ 270 (457)
++.++.||+.... ...++.+|. .|++ |+.-...+.. ....+.++.+++||+... ...+..
T Consensus 59 ~v~~g~vyv~~~~--~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------dg~l~a 129 (571)
T 2ad6_A 59 LVIGDMMYVHSAF--PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA-------NGHLLA 129 (571)
T ss_dssp EEETTEEEEECST--TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEEEE
T ss_pred EEECCEEEEEeCC--CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC-------CCEEEE
Confidence 6679999997642 346899999 7764 8874432211 011234567889988632 257899
Q ss_pred EeCCCCc--EEEC-CCCCCC-CcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCc--eEEc
Q 012755 271 YNSELGT--WETL-PDMNLP-RKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRT--WKRI 329 (457)
Q Consensus 271 yd~~t~~--W~~~-~~~p~~-r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~ 329 (457)
+|.+|++ |+.- ...+.. ....+.++.++++|+-.+.... .....+..||+++++ |+.-
T Consensus 130 lD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~-~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 130 LDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAEL-GVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGG-TCCCEEEEEETTTCCEEEEEE
T ss_pred EECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCcc-CCCCEEEEEECCCCcEEEEEc
Confidence 9999886 9753 221111 1123345679999885432111 124578999998874 8654
No 53
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.05 E-value=0.024 Score=52.97 Aligned_cols=184 Identities=12% Similarity=0.089 Sum_probs=96.9
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCcc-ceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCcEEECC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRC-LFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGTWETLP 282 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~-~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~ 282 (457)
++..++.|+. ...+.+||..+++......+..... -.+++.. ++..++.|+.+ ..+.+||..+++....-
T Consensus 108 ~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------g~v~~~d~~~~~~~~~~ 179 (337)
T 1gxr_A 108 DGCTLIVGGE--ASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD------GNIAVWDLHNQTLVRQF 179 (337)
T ss_dssp TSSEEEEEES--SSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEEE
T ss_pred CCCEEEEEcC--CCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC------CcEEEEeCCCCceeeee
Confidence 4555555553 3468999998877433322221111 1122222 55666666643 35889999887643321
Q ss_pred CCCCCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEE-ECCEEE
Q 012755 283 DMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAV-VNNQLY 359 (457)
Q Consensus 283 ~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~g~ly 359 (457)
.. .......+.+ +++.++.++. ...+..||+.+.+-...-.... ....++. -++..+
T Consensus 180 ~~--~~~~i~~~~~~~~~~~l~~~~~------dg~i~~~d~~~~~~~~~~~~~~------------~v~~~~~s~~~~~l 239 (337)
T 1gxr_A 180 QG--HTDGASCIDISNDGTKLWTGGL------DNTVRSWDLREGRQLQQHDFTS------------QIFSLGYCPTGEWL 239 (337)
T ss_dssp CC--CSSCEEEEEECTTSSEEEEEET------TSEEEEEETTTTEEEEEEECSS------------CEEEEEECTTSSEE
T ss_pred ec--ccCceEEEEECCCCCEEEEEec------CCcEEEEECCCCceEeeecCCC------------ceEEEEECCCCCEE
Confidence 11 1111222222 5656666653 2468889998765433222111 1111222 267777
Q ss_pred EEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEE-EeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 360 SADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFK-ACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 360 ~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~-~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
++++..+.+..||..+..=..+...... -..+. .-++++++.|+.++ .+.+||.+++
T Consensus 240 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~-------v~~~~~~~~~~~l~~~~~dg------~i~~~~~~~~ 297 (337)
T 1gxr_A 240 AVGMESSNVEVLHVNKPDKYQLHLHESC-------VLSLKFAYCGKWFVSTGKDN------LLNAWRTPYG 297 (337)
T ss_dssp EEEETTSCEEEEETTSSCEEEECCCSSC-------EEEEEECTTSSEEEEEETTS------EEEEEETTTC
T ss_pred EEEcCCCcEEEEECCCCCeEEEcCCccc-------eeEEEECCCCCEEEEecCCC------cEEEEECCCC
Confidence 7887788999999988753333221111 11222 23567777776653 5888888774
No 54
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.00 E-value=0.064 Score=49.51 Aligned_cols=155 Identities=14% Similarity=0.034 Sum_probs=92.6
Q ss_pred eeEEeeC-CEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEEC
Q 012755 243 FGSSSLG-EVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNL 321 (457)
Q Consensus 243 ~~~~~~~-~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~ 321 (457)
++++.-+ +.+|+..|..+ .+.+.++|+.|++=..--+++......+.+..++++|+..- ..+.+.+||+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~----~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~------~~~~v~viD~ 93 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG----RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVW------LKNIGFIYDR 93 (266)
T ss_dssp EEEEECSTTEEEEEECSTT----TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEET------TCSEEEEEET
T ss_pred ccEEEeCCCeEEEECCCCC----CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEe------cCCEEEEEEC
Confidence 5565555 89999877432 36899999999985443233333334456677889999853 3467899999
Q ss_pred CCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCcE-EEec--cCCCccCCCCcceEEE
Q 012755 322 ETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQATNVVKKYNKTNNSW-TVVK--RLPVRANSFNGWGLAF 398 (457)
Q Consensus 322 ~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~~W-~~v~--~~p~~~~~~~~~~~~~ 398 (457)
++.+ .+..++.. ...+.+++.-++++|+..+ .+.+...|+++.+= ..+. ..+.+... -. .+
T Consensus 94 ~t~~--v~~~i~~g---------~~~g~glt~Dg~~l~vs~g-s~~l~viD~~t~~v~~~I~Vg~~~~p~~~--~n--el 157 (266)
T 2iwa_A 94 RTLS--NIKNFTHQ---------MKDGWGLATDGKILYGSDG-TSILYEIDPHTFKLIKKHNVKYNGHRVIR--LN--EL 157 (266)
T ss_dssp TTTE--EEEEEECC---------SSSCCEEEECSSSEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCC--EE--EE
T ss_pred CCCc--EEEEEECC---------CCCeEEEEECCCEEEEECC-CCeEEEEECCCCcEEEEEEECCCCccccc--ce--eE
Confidence 8764 33333220 0123344444567888774 78999999998642 2222 11111110 11 22
Q ss_pred EEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 399 KACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 399 ~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
...+|+||+--... ..+.+.|+.++
T Consensus 158 e~~dg~lyvn~~~~------~~V~vID~~tg 182 (266)
T 2iwa_A 158 EYINGEVWANIWQT------DCIARISAKDG 182 (266)
T ss_dssp EEETTEEEEEETTS------SEEEEEETTTC
T ss_pred EEECCEEEEecCCC------CeEEEEECCCC
Confidence 23388998754322 26888899884
No 55
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.00 E-value=0.026 Score=51.95 Aligned_cols=151 Identities=8% Similarity=-0.126 Sum_probs=94.6
Q ss_pred eeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECC
Q 012755 243 FGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLE 322 (457)
Q Consensus 243 ~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~ 322 (457)
.++...++.+|+..|..+ .+.++|++|++=..-- ++..-...+++..+++||+... ..+.+.+||++
T Consensus 58 qGL~~~~~~Ly~stG~~g------~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw------~~~~v~V~D~~ 124 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQG------TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTW------TEGLLFTWSGM 124 (268)
T ss_dssp EEEEEETTEEEEEETTTT------EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEES------SSCEEEEEETT
T ss_pred ceEEEECCEEEEEcCCCC------EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEc------cCCEEEEEECC
Confidence 456667899999988542 3889999998732211 4433344556777899999843 24678999998
Q ss_pred CCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCcEE-Eec--cCCCccCCCCcceEEEE
Q 012755 323 TRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQATNVVKKYNKTNNSWT-VVK--RLPVRANSFNGWGLAFK 399 (457)
Q Consensus 323 t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~~W~-~v~--~~p~~~~~~~~~~~~~~ 399 (457)
+.+-.. .++. ...+.+++.-+++||+..| .+.++.+|+++.+=. .+. .-+.+.. .--.+.
T Consensus 125 Tl~~~~--ti~~----------~~eGwGLt~Dg~~L~vSdG-s~~l~~iDp~T~~v~~~I~V~~~g~~v~----~lNeLe 187 (268)
T 3nok_A 125 PPQRER--TTRY----------SGEGWGLCYWNGKLVRSDG-GTMLTFHEPDGFALVGAVQVKLRGQPVE----LINELE 187 (268)
T ss_dssp TTEEEE--EEEC----------SSCCCCEEEETTEEEEECS-SSEEEEECTTTCCEEEEEECEETTEECC----CEEEEE
T ss_pred cCcEEE--EEeC----------CCceeEEecCCCEEEEECC-CCEEEEEcCCCCeEEEEEEeCCCCcccc----cccccE
Confidence 865432 2222 1124567777889999886 789999999987533 222 1111111 001233
Q ss_pred EeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 400 ACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 400 ~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
..+|+||+-- .. ...|.+.||+++
T Consensus 188 ~~dG~lyanv-w~-----s~~I~vIDp~TG 211 (268)
T 3nok_A 188 CANGVIYANI-WH-----SSDVLEIDPATG 211 (268)
T ss_dssp EETTEEEEEE-TT-----CSEEEEECTTTC
T ss_pred EeCCEEEEEE-CC-----CCeEEEEeCCCC
Confidence 4588998633 21 136888899884
No 56
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.97 E-value=0.14 Score=53.26 Aligned_cols=119 Identities=15% Similarity=0.207 Sum_probs=71.2
Q ss_pred EEeCCEEEEEceecCCcEEEEEEC-CCCc--EEeCCCCCCC-----cc---ceeEEe--eCCE----EEEEeeecCCCCc
Q 012755 202 LAVGTQLLVFGRELSGFAIWMYSL-IANC--WSKCPQMNLP-----RC---LFGSSS--LGEV----AIVAGGTDKNGCI 264 (457)
Q Consensus 202 ~~~~~~lyv~GG~~~~~~v~~yd~-~t~~--W~~l~~lp~~-----r~---~~~~~~--~~~~----iyv~GG~~~~~~~ 264 (457)
++.++.||+.+.. ...++.+|. .|++ |+.-+..+.. ++ ..+.++ .+++ ||+...
T Consensus 59 ~v~~g~vyv~~~~--~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~------- 129 (599)
T 1w6s_A 59 LVVDGKMYIHTSF--PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL------- 129 (599)
T ss_dssp EEETTEEEEECST--TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-------
T ss_pred EEECCEEEEEeCC--CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-------
Confidence 6679999997642 346899999 7764 8875433211 11 123344 5777 887532
Q ss_pred cceEEEEeCCCCc--EEECC-CCCCC-CcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCc--eEEcC
Q 012755 265 LKSAELYNSELGT--WETLP-DMNLP-RKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRT--WKRIE 330 (457)
Q Consensus 265 ~~~v~~yd~~t~~--W~~~~-~~p~~-r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~ 330 (457)
...+..+|.+|++ |+.-. ..... ....+.++.+++||+-.+.... .....+..||.+|++ |+.-.
T Consensus 130 dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~-g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 130 DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAEL-GVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGG-TCCCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEeccccc-CCCCeEEEEECCCCcEEEEEcC
Confidence 2478999999887 98532 21111 1123345679998874321111 124578999999875 87543
No 57
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.94 E-value=0.067 Score=50.83 Aligned_cols=191 Identities=8% Similarity=0.075 Sum_probs=101.0
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCc-cceeEEee-C--CEEEEEeeecCCCCccceEEEEeCCCCcEEE
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPR-CLFGSSSL-G--EVAIVAGGTDKNGCILKSAELYNSELGTWET 280 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r-~~~~~~~~-~--~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~ 280 (457)
++..++.|+.. ..+.+||...+++..+..+.... .-.+++.. + +.+++.|+.+ ..+.+||..+++|..
T Consensus 22 ~~~~l~~~~~d--g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~~~~~ 93 (379)
T 3jrp_A 22 YGKRLATCSSD--KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKEENGRWSQ 93 (379)
T ss_dssp SSSEEEEEETT--SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT------SCEEEEEEETTEEEE
T ss_pred CCCEEEEEECC--CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC------CEEEEEEcCCCceeE
Confidence 45555555543 34777777766665543332211 11222222 2 5666777654 358889999998876
Q ss_pred CCCCCCCCcceeEEEE--C--CEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCC-EEEEE-
Q 012755 281 LPDMNLPRKLCSGFFM--D--GKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPP-LVAVV- 354 (457)
Q Consensus 281 ~~~~p~~r~~~~~~~~--~--g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~-~~~~~- 354 (457)
+..+.........+.+ + +.+.+.|+.+ ..+.+||..+..-.....+.. ..... .++..
T Consensus 94 ~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~----------~~~~v~~~~~~~ 157 (379)
T 3jrp_A 94 IAVHAVHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDA----------HAIGVNSASWAP 157 (379)
T ss_dssp EEEECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCTTSCCCEEEEEC----------CTTCEEEEEECC
T ss_pred eeeecCCCcceEEEEeCCCCCCCEEEEecCC------CcEEEEecCCCCceeeEEecC----------CCCceEEEEEcC
Confidence 6444332222223333 2 5566666532 467888887763211111111 11111 11111
Q ss_pred -------------CCEEEEEecCCCeEEEEECCCC--cEEEeccCCCccCCCCcceEEEEE-eC---CEEEEEcCcCCCC
Q 012755 355 -------------NNQLYSADQATNVVKKYNKTNN--SWTVVKRLPVRANSFNGWGLAFKA-CG---NSLLVIGGHRELQ 415 (457)
Q Consensus 355 -------------~g~ly~~gg~~~~v~~Yd~~~~--~W~~v~~~p~~~~~~~~~~~~~~~-~~---g~lyv~GG~~~~~ 415 (457)
++.+++.|+..+.|..||..+. .|..+..+..... .-..++. -+ +.+++.|+.++
T Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~----~v~~~~~sp~~~~~~~l~s~~~dg-- 231 (379)
T 3jrp_A 158 ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD----WVRDVAWSPTVLLRSYLASVSQDR-- 231 (379)
T ss_dssp CC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS----CEEEEEECCCCSSSEEEEEEETTS--
T ss_pred ccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccC----cEeEEEECCCCCCCCeEEEEeCCC--
Confidence 4777888888888999998654 4665554432221 1112222 24 78888887764
Q ss_pred CceEEEEEeeCCCC
Q 012755 416 GEIIVLHSWDPTDG 429 (457)
Q Consensus 416 ~~~~~v~~y~~~~~ 429 (457)
.+.+||....
T Consensus 232 ----~i~iwd~~~~ 241 (379)
T 3jrp_A 232 ----TCIIWTQDNE 241 (379)
T ss_dssp ----CEEEEEESST
T ss_pred ----EEEEEeCCCC
Confidence 3777887763
No 58
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.91 E-value=0.096 Score=56.14 Aligned_cols=189 Identities=4% Similarity=0.022 Sum_probs=106.5
Q ss_pred cEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEE-eCCEEEEEceecCCcEEEEEECCCCcEEeCCCCC--
Q 012755 161 HWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLA-VGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMN-- 237 (457)
Q Consensus 161 ~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp-- 237 (457)
+.|++......+..||+.++++..+.....+ .... ..++. .++.|++... ..+++||+.+++|+.....+
T Consensus 418 g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~--~~~v-~~i~~d~~g~lwigt~----~Gl~~~~~~~~~~~~~~~~~~~ 490 (781)
T 3v9f_A 418 GNLWFGTYLGNISYYNTRLKKFQIIELEKNE--LLDV-RVFYEDKNKKIWIGTH----AGVFVIDLASKKVIHHYDTSNS 490 (781)
T ss_dssp SCEEEEETTEEEEEECSSSCEEEECCSTTTC--CCCE-EEEEECTTSEEEEEET----TEEEEEESSSSSCCEEECTTTS
T ss_pred CCEEEEeccCCEEEEcCCCCcEEEeccCCCC--CCeE-EEEEECCCCCEEEEEC----CceEEEeCCCCeEEecccCccc
Confidence 4455533236788999998888776532111 0000 11122 2567777421 46999999999887654322
Q ss_pred ---CCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCC-CCcceeEEEE--CCEEEEEeccCCCC
Q 012755 238 ---LPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNL-PRKLCSGFFM--DGKFYIIGGMSSPT 310 (457)
Q Consensus 238 ---~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~-~r~~~~~~~~--~g~iyv~GG~~~~~ 310 (457)
... -.++.. -++.|++.. .. .-+.+||+.+++++....... +......... +|.|++..
T Consensus 491 ~~~~~~-i~~i~~d~~g~lWigt-~~------~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T------ 556 (781)
T 3v9f_A 491 QLLENF-VRSIAQDSEGRFWIGT-FG------GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLAT------ 556 (781)
T ss_dssp SCSCSC-EEEEEECTTCCEEEEE-SS------SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEE------
T ss_pred ccccce-eEEEEEcCCCCEEEEE-cC------CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEE------
Confidence 111 112222 256777642 11 247889999999887643111 1111112222 57787752
Q ss_pred CCCceE-EEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEEec
Q 012755 311 DPLTCG-EEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV-NNQLYSADQATNVVKKYNKTNNSWTVVK 382 (457)
Q Consensus 311 ~~~~~~-~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~g~ly~~gg~~~~v~~Yd~~~~~W~~v~ 382 (457)
...+ .+||++++++......... + .....+++.- +|.|++.+ .+.+.+||+++.+++...
T Consensus 557 --~~Glv~~~d~~~~~~~~~~~~~gl-------~-~~~i~~i~~d~~g~lW~~t--~~Gl~~~~~~~~~~~~~~ 618 (781)
T 3v9f_A 557 --GEGLVCFPSARNFDYQVFQRKEGL-------P-NTHIRAISEDKNGNIWAST--NTGISCYITSKKCFYTYD 618 (781)
T ss_dssp --TTEEEEESCTTTCCCEEECGGGTC-------S-CCCCCEEEECSSSCEEEEC--SSCEEEEETTTTEEEEEC
T ss_pred --CCCceEEECCCCCcEEEccccCCC-------C-CceEEEEEECCCCCEEEEc--CCceEEEECCCCceEEec
Confidence 1345 8899999988876532110 0 1122334333 67888775 457999999999988765
No 59
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.90 E-value=0.073 Score=52.42 Aligned_cols=187 Identities=12% Similarity=0.132 Sum_probs=103.7
Q ss_pred EEeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEEC
Q 012755 202 LAVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETL 281 (457)
Q Consensus 202 ~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~ 281 (457)
+..++..++.|+.. ..+.+||..+.+-...- ............++.+++.|+.+ ..+.++|..+++-...
T Consensus 139 ~~~d~~~l~~g~~d--g~i~iwd~~~~~~~~~~--~~h~~~v~~l~~~~~~l~sg~~d------g~i~vwd~~~~~~~~~ 208 (435)
T 1p22_A 139 LQYDDQKIVSGLRD--NTIKIWDKNTLECKRIL--TGHTGSVLCLQYDERVIITGSSD------STVRVWDVNTGEMLNT 208 (435)
T ss_dssp EECCSSEEEEEESS--SCEEEEESSSCCEEEEE--CCCSSCEEEEECCSSEEEEEETT------SCEEEEESSSCCEEEE
T ss_pred EEECCCEEEEEeCC--CeEEEEeCCCCeEEEEE--cCCCCcEEEEEECCCEEEEEcCC------CeEEEEECCCCcEEEE
Confidence 34567777777654 36888998876643321 11111122233477777777754 4688899988764322
Q ss_pred CCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCceEEc-CCCCCCCCCCCCCCCCCCCCEEEEECCEEEE
Q 012755 282 PDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRI-ENMYPSNVGTQSNPAMSSPPLVAVVNNQLYS 360 (457)
Q Consensus 282 ~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~ 360 (457)
+.........+..++..++.|+.+ ..+..||..+..-... ..... .......+..++..++
T Consensus 209 --~~~h~~~v~~l~~~~~~l~s~s~d------g~i~vwd~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~l~ 270 (435)
T 1p22_A 209 --LIHHCEAVLHLRFNNGMMVTCSKD------RSIAVWDMASPTDITLRRVLVG----------HRAAVNVVDFDDKYIV 270 (435)
T ss_dssp --ECCCCSCEEEEECCTTEEEEEETT------SCEEEEECSSSSCCEEEEEECC----------CSSCEEEEEEETTEEE
T ss_pred --EcCCCCcEEEEEEcCCEEEEeeCC------CcEEEEeCCCCCCceeeeEecC----------CCCcEEEEEeCCCEEE
Confidence 111122223333455556666543 3578899877542211 11111 1222334445777777
Q ss_pred EecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 361 ADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 361 ~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
.|+..+.+..||..+.+-.. .+.... . .+..+..++.+++.|+.++ .+.+||..++
T Consensus 271 s~~~dg~i~vwd~~~~~~~~--~~~~~~----~-~v~~~~~~~~~l~~g~~dg------~i~iwd~~~~ 326 (435)
T 1p22_A 271 SASGDRTIKVWNTSTCEFVR--TLNGHK----R-GIACLQYRDRLVVSGSSDN------TIRLWDIECG 326 (435)
T ss_dssp EEETTSEEEEEETTTCCEEE--EEECCS----S-CEEEEEEETTEEEEEETTS------CEEEEETTTC
T ss_pred EEeCCCeEEEEECCcCcEEE--EEcCCC----C-cEEEEEeCCCEEEEEeCCC------eEEEEECCCC
Confidence 88788899999998864322 222111 1 1233445677777777664 4888998764
No 60
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.90 E-value=0.037 Score=54.18 Aligned_cols=216 Identities=10% Similarity=-0.023 Sum_probs=112.5
Q ss_pred cEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCC---CCccc-eeEE
Q 012755 171 PWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMN---LPRCL-FGSS 246 (457)
Q Consensus 171 ~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp---~~r~~-~~~~ 246 (457)
.++.+|+.+..+..+..++........ ....++.+++.++.. ..+.+||..+++.....+.. ..... .+++
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~~~~~---~~s~~~~~~~~~~~~--~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~ 176 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQPKSV---RFIDNTRLAIPLLED--EGMDVLDINSGQTVRLSPPEKYKKKLGFVETIS 176 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSCBCCC---EESSSSEEEEEBTTS--SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEE
T ss_pred EEEEECCCCCcceEEEEEcCCCCceEE---EEeCCCeEEEEeCCC--CeEEEEECCCCeEeeecCcccccccCCceeEEE
Confidence 677788876655554433322211111 223377888877543 35899999988776543221 11111 1122
Q ss_pred -eeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCC
Q 012755 247 -SLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLET 323 (457)
Q Consensus 247 -~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t 323 (457)
.-++.+++.++.+ ..+.+||..+++-...-.. .......++.. +..+|+.++. ...+.+||+.+
T Consensus 177 ~~~~~~~~~s~~~d------~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~------~~~i~~~d~~~ 243 (433)
T 3bws_A 177 IPEHNELWVSQMQA------NAVHVFDLKTLAYKATVDL-TGKWSKILLYDPIRDLVYCSNWI------SEDISVIDRKT 243 (433)
T ss_dssp EGGGTEEEEEEGGG------TEEEEEETTTCCEEEEEEC-SSSSEEEEEEETTTTEEEEEETT------TTEEEEEETTT
T ss_pred EcCCCEEEEEECCC------CEEEEEECCCceEEEEEcC-CCCCeeEEEEcCCCCEEEEEecC------CCcEEEEECCC
Confidence 2367888877643 4788999988664321111 11112223333 3457676543 24688999988
Q ss_pred CceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CC-EEEEEec-------CCCeEEEEECCCCcEEEeccCCCccCCCCc
Q 012755 324 RTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NN-QLYSADQ-------ATNVVKKYNKTNNSWTVVKRLPVRANSFNG 393 (457)
Q Consensus 324 ~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g-~ly~~gg-------~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~ 393 (457)
++....-.... ....+.+ +| .|++.+. ..+.+..||+.+++-......+...
T Consensus 244 ~~~~~~~~~~~-------------~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~----- 305 (433)
T 3bws_A 244 KLEIRKTDKIG-------------LPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNK----- 305 (433)
T ss_dssp TEEEEECCCCS-------------EEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECE-----
T ss_pred CcEEEEecCCC-------------CceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCc-----
Confidence 76543322111 1222233 45 4554442 2458999999887543332111111
Q ss_pred ceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 394 WGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 394 ~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
.+++....++.+|+.++.++ .+.+||.++
T Consensus 306 ~~~~~~~~g~~l~~~~~~~~------~v~v~d~~~ 334 (433)
T 3bws_A 306 RHIVSGNTENKIYVSDMCCS------KIEVYDLKE 334 (433)
T ss_dssp EEEEECSSTTEEEEEETTTT------EEEEEETTT
T ss_pred ceEEECCCCCEEEEEecCCC------EEEEEECCC
Confidence 11222122347888876543 578888876
No 61
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.89 E-value=0.096 Score=48.52 Aligned_cols=191 Identities=13% Similarity=0.041 Sum_probs=102.5
Q ss_pred CCEEEEEceecCCcEEEEEECCCCc--EEeCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCc--EEE
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANC--WSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGT--WET 280 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~--W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~--W~~ 280 (457)
.+.+++.|.. ...+.++|+.|++ |+.-..-. .........-++++++.+ ...+..||+ +++ |+.
T Consensus 4 ~~~~lv~~~~--~~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~pdG~ilvs~--------~~~V~~~d~-~G~~~W~~ 71 (276)
T 3no2_A 4 PQHLLVGGSG--WNKIAIINKDTKEIVWEYPLEKG-WECNSVAATKAGEILFSY--------SKGAKMITR-DGRELWNI 71 (276)
T ss_dssp CCEEEEECTT--CSEEEEEETTTTEEEEEEECCTT-CCCCEEEECTTSCEEEEC--------BSEEEEECT-TSCEEEEE
T ss_pred CCcEEEeeCC--CCEEEEEECCCCeEEEEeCCCcc-CCCcCeEECCCCCEEEeC--------CCCEEEECC-CCCEEEEE
Confidence 3456666532 3568888987775 66532210 122222333477888832 246899999 554 775
Q ss_pred CCCCCCCCcceeE-EEECCEEEEEeccCCCCCCCceEEEEECCCC-ceEEc-C-CCCCCCCCCCCCCCCCCCCEEEEECC
Q 012755 281 LPDMNLPRKLCSG-FFMDGKFYIIGGMSSPTDPLTCGEEYNLETR-TWKRI-E-NMYPSNVGTQSNPAMSSPPLVAVVNN 356 (457)
Q Consensus 281 ~~~~p~~r~~~~~-~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~-~W~~~-~-~~~~~~~~~~~~~~~r~~~~~~~~~g 356 (457)
-.+ .....+++ ...+|++++..... ...++.+|+... .|+.- . .... +...........+|
T Consensus 72 ~~~--~~~~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~--------~~~~~~~v~~~~~G 136 (276)
T 3no2_A 72 AAP--AGCEMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIER--------PHAQFRQINKNKKG 136 (276)
T ss_dssp ECC--TTCEEEEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSS--------GGGSCSCCEECTTS
T ss_pred cCC--CCccccccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCc--------ccccccCceECCCC
Confidence 432 11112222 23477777764321 245778887544 24421 1 1000 00011112334477
Q ss_pred EEEEEecCCCeEEEEECCCC-cEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCCCCCCCC
Q 012755 357 QLYSADQATNVVKKYNKTNN-SWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDGNSGEAQ 435 (457)
Q Consensus 357 ~ly~~gg~~~~v~~Yd~~~~-~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~~w~~~~ 435 (457)
.+++.....+.|.+||++.+ .|+.-.. ... ++ +....+|.++|.+...+ .+..+|+++ ++.-
T Consensus 137 ~~lv~~~~~~~v~~~d~~G~~~w~~~~~--~~~-----~~-~~~~~~g~~~v~~~~~~------~v~~~d~~t---G~~~ 199 (276)
T 3no2_A 137 NYLVPLFATSEVREIAPNGQLLNSVKLS--GTP-----FS-SAFLDNGDCLVACGDAH------CFVQLNLES---NRIV 199 (276)
T ss_dssp CEEEEETTTTEEEEECTTSCEEEEEECS--SCC-----CE-EEECTTSCEEEECBTTS------EEEEECTTT---CCEE
T ss_pred CEEEEecCCCEEEEECCCCCEEEEEECC--CCc-----cc-eeEcCCCCEEEEeCCCC------eEEEEeCcC---CcEE
Confidence 87777766788999999844 4654322 111 11 23344778888775431 488899987 6667
Q ss_pred eeEe
Q 012755 436 WNEL 439 (457)
Q Consensus 436 W~~l 439 (457)
|+.-
T Consensus 200 w~~~ 203 (276)
T 3no2_A 200 RRVN 203 (276)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8653
No 62
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.89 E-value=0.13 Score=48.80 Aligned_cols=223 Identities=11% Similarity=0.090 Sum_probs=108.3
Q ss_pred EEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCcE--EeCCCCC-C
Q 012755 162 WVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANCW--SKCPQMN-L 238 (457)
Q Consensus 162 ~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W--~~l~~lp-~ 238 (457)
.+...+....+..+|..+..-... ++.... .........++..++.||.. ..+.+||..+..- +....+. .
T Consensus 69 ~l~s~s~Dg~v~iWd~~~~~~~~~--~~~~~~--~v~~~~~s~~~~~l~s~~~d--~~v~iw~~~~~~~~~~~~~~~~~h 142 (340)
T 1got_B 69 LLLSASQDGKLIIWDSYTTNKVHA--IPLRSS--WVMTCAYAPSGNYVACGGLD--NICSIYNLKTREGNVRVSRELAGH 142 (340)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEE--EECSSS--CEEEEEECTTSSEEEEEETT--CEEEEEETTTCSBSCEEEEEEECC
T ss_pred EEEEEeCCCcEEEEECCCCCcceE--eecCCc--cEEEEEECCCCCEEEEEeCC--CeEEEEECccCCCcceeEEEecCC
Confidence 444444456677888766543211 111000 00001122355666666643 4688888876431 1110011 0
Q ss_pred CccceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE--CCEEEEEeccCCCCCCCce
Q 012755 239 PRCLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTC 315 (457)
Q Consensus 239 ~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~ 315 (457)
...-.++... ++. ++.|+.+ ..+.++|..+++-... +.........+.+ ++.+++.|+.+ ..
T Consensus 143 ~~~v~~~~~~~~~~-l~s~s~d------~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d------~~ 207 (340)
T 1got_B 143 TGYLSCCRFLDDNQ-IVTSSGD------TTCALWDIETGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACD------AS 207 (340)
T ss_dssp SSCEEEEEEEETTE-EEEEETT------SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT------SC
T ss_pred CccEEEEEECCCCc-EEEEECC------CcEEEEECCCCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCC------Cc
Confidence 1111112222 455 4455432 4688899988764332 1111111112222 56677777643 35
Q ss_pred EEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCc
Q 012755 316 GEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNG 393 (457)
Q Consensus 316 ~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~ 393 (457)
+..||+.+..-... +.. .......+.+ ++.+++.|+..+.+..||..+..-...-..+...
T Consensus 208 v~~wd~~~~~~~~~--~~~----------h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~----- 270 (340)
T 1got_B 208 AKLWDVREGMCRQT--FTG----------HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNII----- 270 (340)
T ss_dssp EEEEETTTCSEEEE--ECC----------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCC-----
T ss_pred EEEEECCCCeeEEE--EcC----------CcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcc-----
Confidence 78899887653321 111 1111122222 6777888888889999999876532221111110
Q ss_pred ceEEEE--EeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 394 WGLAFK--ACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 394 ~~~~~~--~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
.++..+ .-++++++.|+.++ .+.+||..+
T Consensus 271 ~~v~~~~~s~~g~~l~~g~~d~------~i~vwd~~~ 301 (340)
T 1got_B 271 CGITSVSFSKSGRLLLAGYDDF------NCNVWDALK 301 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTS------EEEEEETTT
T ss_pred cceEEEEECCCCCEEEEECCCC------eEEEEEccc
Confidence 112222 23677888887653 588898866
No 63
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.86 E-value=0.61 Score=49.11 Aligned_cols=213 Identities=13% Similarity=0.122 Sum_probs=116.2
Q ss_pred cccEEEEEecCccEEEEeCCCC--cEEeCCCCCCCc----cccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCc--E
Q 012755 159 VEHWVYLACILMPWEAFDPLRQ--RWMRLPRMQCDE----CFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANC--W 230 (457)
Q Consensus 159 ~~~~l~~~~~~~~~~~ydp~~~--~W~~l~~~p~~~----~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~--W 230 (457)
.++.+|+......++++|..+. .|..-...+... +........+..++.||+... ...++.+|..|++ |
T Consensus 76 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~---dg~l~alD~~tG~~~W 152 (677)
T 1kb0_A 76 VDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW---DGRLIALDAATGKEVW 152 (677)
T ss_dssp ETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT---TSEEEEEETTTCCEEE
T ss_pred ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC---CCEEEEEECCCCCEEe
Confidence 3778888877778999998776 586644332111 000111224567888888642 3468999998775 8
Q ss_pred EeCCC--CCC-CccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCc--EEECCCCCCC---C--------------
Q 012755 231 SKCPQ--MNL-PRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGT--WETLPDMNLP---R-------------- 288 (457)
Q Consensus 231 ~~l~~--lp~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~~---r-------------- 288 (457)
+.-.. .+. .....+.++.++++|+..+..+. .....+..||..|++ |+.-...+.. .
T Consensus 153 ~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~-~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~ 231 (677)
T 1kb0_A 153 HQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEY-GVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDP 231 (677)
T ss_dssp EEETTTTCCSSCBCCSCCEEETTEEEECCBCTTT-CCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCG
T ss_pred eecCCcCcCcCcccccCcEEECCEEEEEeccccc-CCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccc
Confidence 65321 111 11112234568888875442221 124679999999887 8764221110 0
Q ss_pred ------------cceeEEE--ECCEEEEEeccC------------CCCCCCceEEEEECCCCc--eEEcCCCCCCCCCCC
Q 012755 289 ------------KLCSGFF--MDGKFYIIGGMS------------SPTDPLTCGEEYNLETRT--WKRIENMYPSNVGTQ 340 (457)
Q Consensus 289 ------------~~~~~~~--~~g~iyv~GG~~------------~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~~~~~ 340 (457)
.....+. .++.||+-.+.. +.......+..+|+.|++ |+.-..... .
T Consensus 232 ~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d-----~ 306 (677)
T 1kb0_A 232 SGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGD-----N 306 (677)
T ss_dssp GGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTC-----C
T ss_pred cCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCc-----c
Confidence 0011222 267888765432 222234579999999875 874322110 0
Q ss_pred CCCCCCCCCEEEE--ECC---EEEEEecCCCeEEEEECCCCc--EEE
Q 012755 341 SNPAMSSPPLVAV--VNN---QLYSADQATNVVKKYNKTNNS--WTV 380 (457)
Q Consensus 341 ~~~~~r~~~~~~~--~~g---~ly~~gg~~~~v~~Yd~~~~~--W~~ 380 (457)
........+.++- .+| .+++++...+.++++|.++++ |+.
T Consensus 307 wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~ 353 (677)
T 1kb0_A 307 WDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAK 353 (677)
T ss_dssp SCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred cccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccc
Confidence 0000112222322 256 566666667788888888764 543
No 64
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.86 E-value=0.06 Score=52.62 Aligned_cols=150 Identities=5% Similarity=-0.017 Sum_probs=85.2
Q ss_pred EEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCC-
Q 012755 208 LLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMN- 285 (457)
Q Consensus 208 lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p- 285 (457)
+|+.|+......++.+|+.+++++.+..++.+....+++.. ++.+++.++.+ ..+.++|+.+++.....+..
T Consensus 91 ~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~------~~i~~~d~~~g~~~~~~~~~~ 164 (433)
T 3bws_A 91 YRIRKPEELNEKLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLED------EGMDVLDINSGQTVRLSPPEK 164 (433)
T ss_dssp EEESSGGGGTTCEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBTTS------SSEEEEETTTCCEEEECCCHH
T ss_pred eeecccCCCceEEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeCCC------CeEEEEECCCCeEeeecCccc
Confidence 34444444445789999987766554433322222222222 67888776532 35899999988876543221
Q ss_pred --CCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEE
Q 012755 286 --LPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLY 359 (457)
Q Consensus 286 --~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly 359 (457)
........+.. ++++++.++.+ ..+.+||+.+.+-...-.... .....++.. +..+|
T Consensus 165 ~~~~~~~v~~~~~~~~~~~~~s~~~d------~~v~~~d~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~l~ 227 (433)
T 3bws_A 165 YKKKLGFVETISIPEHNELWVSQMQA------NAVHVFDLKTLAYKATVDLTG-----------KWSKILLYDPIRDLVY 227 (433)
T ss_dssp HHTTCCEEEEEEEGGGTEEEEEEGGG------TEEEEEETTTCCEEEEEECSS-----------SSEEEEEEETTTTEEE
T ss_pred ccccCCceeEEEEcCCCEEEEEECCC------CEEEEEECCCceEEEEEcCCC-----------CCeeEEEEcCCCCEEE
Confidence 11112222333 78888887643 468899998865432211111 111123322 34577
Q ss_pred EEecCCCeEEEEECCCCcEEE
Q 012755 360 SADQATNVVKKYNKTNNSWTV 380 (457)
Q Consensus 360 ~~gg~~~~v~~Yd~~~~~W~~ 380 (457)
+.+...+.+..||+.+++...
T Consensus 228 ~~~~~~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 228 CSNWISEDISVIDRKTKLEIR 248 (433)
T ss_dssp EEETTTTEEEEEETTTTEEEE
T ss_pred EEecCCCcEEEEECCCCcEEE
Confidence 777677899999998876543
No 65
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.85 E-value=0.54 Score=48.39 Aligned_cols=213 Identities=11% Similarity=0.080 Sum_probs=114.5
Q ss_pred cccEEEEEec-CccEEEEeC-CCC--cEEeCCCCCCCc----cccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCc-
Q 012755 159 VEHWVYLACI-LMPWEAFDP-LRQ--RWMRLPRMQCDE----CFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANC- 229 (457)
Q Consensus 159 ~~~~l~~~~~-~~~~~~ydp-~~~--~W~~l~~~p~~~----~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~- 229 (457)
.++.+|+... ...++++|. .+. .|..-...+... +........+..++.||+... ...++.+|..|++
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg~l~alD~~tG~~ 137 (571)
T 2ad6_A 61 IGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA---NGHLLALDAKTGKI 137 (571)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT---TSEEEEEETTTCCE
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC---CCEEEEEECCCCCE
Confidence 4788898876 678999998 665 687643322110 000111224567888888643 3468999998874
Q ss_pred -EEe-CCCCCCC-ccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCc--EEECCCCCC------C-----------
Q 012755 230 -WSK-CPQMNLP-RCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGT--WETLPDMNL------P----------- 287 (457)
Q Consensus 230 -W~~-l~~lp~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~------~----------- 287 (457)
|+. +...+.. ....+.++.++++|+..+..+. .....+..||.+|++ |+.-...+. +
T Consensus 138 ~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~-~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~ 216 (571)
T 2ad6_A 138 NWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAEL-GVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQ 216 (571)
T ss_dssp EEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGG-TCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred EEEecCCCCCccceeccCCEEECCEEEEEecCCcc-CCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccc
Confidence 875 3221111 1111224568888875432111 123579999999876 875422111 0
Q ss_pred -----------C-------cceeEEEE--CCEEEEEeccC---------CCCCCCceEEEEECCCCc--eEEcCCCCCCC
Q 012755 288 -----------R-------KLCSGFFM--DGKFYIIGGMS---------SPTDPLTCGEEYNLETRT--WKRIENMYPSN 336 (457)
Q Consensus 288 -----------r-------~~~~~~~~--~g~iyv~GG~~---------~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~ 336 (457)
. .....+.- .+.+|+-.|.. +.......+.++|++|++ |+.-......
T Consensus 217 ~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~- 295 (571)
T 2ad6_A 217 FGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDE- 295 (571)
T ss_dssp SSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCS-
T ss_pred cccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcc-
Confidence 0 00112221 47888865531 111124579999999874 8754321100
Q ss_pred CCCCCCCCCCCCCEEEE--ECC---EEEEEecCCCeEEEEECCCCc--EEE
Q 012755 337 VGTQSNPAMSSPPLVAV--VNN---QLYSADQATNVVKKYNKTNNS--WTV 380 (457)
Q Consensus 337 ~~~~~~~~~r~~~~~~~--~~g---~ly~~gg~~~~v~~Yd~~~~~--W~~ 380 (457)
........+.++. .+| ++++++...+.++++|.++++ |+.
T Consensus 296 ----~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~ 342 (571)
T 2ad6_A 296 ----WDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAE 342 (571)
T ss_dssp ----SCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ----cccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeee
Confidence 0000111223332 367 366666666789999988774 654
No 66
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.83 E-value=0.07 Score=52.51 Aligned_cols=221 Identities=8% Similarity=-0.090 Sum_probs=113.8
Q ss_pred ccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEcee-cCCcEEEEEECCCCcEEeCCCCCCCccceeEEe-
Q 012755 170 MPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRE-LSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSS- 247 (457)
Q Consensus 170 ~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~-~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~- 247 (457)
..++.+|.....-..+..-... ........++..+++++. .....++++|..+++...+...+.. ..+.+.
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~-----v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~--~~~~~~s 231 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQP-----LMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRH--NGAPAFS 231 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSC-----EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSC--EEEEEEC
T ss_pred ceEEEEcCCCCCCEEEeCCCCc-----ceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCc--ccCEEEc
Confidence 5677888765443332211100 000112235544444443 2345899999999887766443321 112222
Q ss_pred eCCE-EEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCC
Q 012755 248 LGEV-AIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETR 324 (457)
Q Consensus 248 ~~~~-iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~ 324 (457)
-+++ |++.+..++ ...++++|..+++...+..... ....... +|+..++++... ....++.+|+.++
T Consensus 232 pdg~~la~~~~~~g----~~~i~~~d~~~~~~~~l~~~~~---~~~~~~~spdg~~l~~~s~~~---g~~~i~~~d~~~~ 301 (415)
T 2hqs_A 232 PDGSKLAFALSKTG----SLNLYVMDLASGQIRQVTDGRS---NNTEPTWFPDSQNLAFTSDQA---GRPQVYKVNINGG 301 (415)
T ss_dssp TTSSEEEEEECTTS----SCEEEEEETTTCCEEECCCCSS---CEEEEEECTTSSEEEEEECTT---SSCEEEEEETTSS
T ss_pred CCCCEEEEEEecCC----CceEEEEECCCCCEEeCcCCCC---cccceEECCCCCEEEEEECCC---CCcEEEEEECCCC
Confidence 2444 554544322 3579999999988877654321 1122222 565444433211 1246888999887
Q ss_pred ceEEcCCCCCCCCCCCCCCCCCCCCEEE-EECCEEEEEecC---CCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEE
Q 012755 325 TWKRIENMYPSNVGTQSNPAMSSPPLVA-VVNNQLYSADQA---TNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKA 400 (457)
Q Consensus 325 ~W~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~g~ly~~gg~---~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~ 400 (457)
.-..+..... ....++ .-+|+.++++.. ...++.+|.++++...+.... . .... ...
T Consensus 302 ~~~~l~~~~~------------~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~--~----~~~~-~~s 362 (415)
T 2hqs_A 302 APQRITWEGS------------QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF--L----DETP-SLA 362 (415)
T ss_dssp CCEECCCSSS------------EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSS--S----CEEE-EEC
T ss_pred CEEEEecCCC------------cccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCC--C----cCCe-EEc
Confidence 7554432111 111111 125554444332 357999999998887654322 1 1112 223
Q ss_pred eCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 401 CGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 401 ~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
-+|+.+++++.++. ...+++||.+.+
T Consensus 363 pdg~~l~~~s~~~~---~~~l~~~d~~g~ 388 (415)
T 2hqs_A 363 PNGTMVIYSSSQGM---GSVLNLVSTDGR 388 (415)
T ss_dssp TTSSEEEEEEEETT---EEEEEEEETTSC
T ss_pred CCCCEEEEEEcCCC---ccEEEEEECCCC
Confidence 36666666654432 347999998764
No 67
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.81 E-value=0.12 Score=46.72 Aligned_cols=185 Identities=12% Similarity=-0.018 Sum_probs=97.6
Q ss_pred CCEEEE-EceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCcEEECC
Q 012755 205 GTQLLV-FGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGTWETLP 282 (457)
Q Consensus 205 ~~~lyv-~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~ 282 (457)
++.+|+ ... ....+.+||+.+......+.... ..-.+++.- ++.+|+... ...+.+||+.++....+.
T Consensus 34 ~g~l~v~~~~--~~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~-------~~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 34 AGNVYVTSEG--MYGRVVKLATGSTGTTVLPFNGL-YQPQGLAVDGAGTVYVTDF-------NNRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp TCCEEEEECS--SSCEEEEECC-----EECCCCSC-CSCCCEEECTTCCEEEEET-------TTEEEEECTTCSCCEECC
T ss_pred CCCEEEEccC--CCCcEEEecCCCcccceEeeCCc-CCcceeEECCCCCEEEEcC-------CCEEEEEeCCCceEeeee
Confidence 567887 432 23578899988776555432111 111233333 567888754 146889999887655443
Q ss_pred CCCCCCcceeEEEE-CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-CCEEEE
Q 012755 283 DMNLPRKLCSGFFM-DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV-NNQLYS 360 (457)
Q Consensus 283 ~~p~~r~~~~~~~~-~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~g~ly~ 360 (457)
.... ..-..+++- +|++|+.... ...+.+||..+.......... .....+++.. +|+||+
T Consensus 104 ~~~~-~~p~~i~~~~~g~l~v~~~~------~~~i~~~~~~~~~~~~~~~~~-----------~~~p~~i~~~~~g~l~v 165 (270)
T 1rwi_B 104 FDGL-NYPEGLAVDTQGAVYVADRG------NNRVVKLAAGSKTQTVLPFTG-----------LNDPDGVAVDNSGNVYV 165 (270)
T ss_dssp CCSC-SSEEEEEECTTCCEEEEEGG------GTEEEEECTTCCSCEECCCCS-----------CCSCCCEEECTTCCEEE
T ss_pred cCCc-CCCcceEECCCCCEEEEECC------CCEEEEEECCCceeEeecccc-----------CCCceeEEEeCCCCEEE
Confidence 2111 112233332 6789987532 245788887766544332111 1112234433 688999
Q ss_pred EecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEE-eCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 361 ADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKA-CGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 361 ~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~-~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
.....+.|.+||+.+..-....... . . . -..++. -+|.||+.....+ .+..|++...
T Consensus 166 ~~~~~~~i~~~~~~~~~~~~~~~~~-~-~---~-p~~i~~d~~g~l~v~~~~~~------~v~~~~~~~~ 223 (270)
T 1rwi_B 166 TDTDNNRVVKLEAESNNQVVLPFTD-I-T---A-PWGIAVDEAGTVYVTEHNTN------QVVKLLAGST 223 (270)
T ss_dssp EEGGGTEEEEECTTTCCEEECCCSS-C-C---S-EEEEEECTTCCEEEEETTTS------CEEEECTTCS
T ss_pred EECCCCEEEEEecCCCceEeecccC-C-C---C-ceEEEECCCCCEEEEECCCC------cEEEEcCCCC
Confidence 8766679999999887644332111 0 1 1 112333 3568888764321 3777888653
No 68
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.80 E-value=0.25 Score=45.17 Aligned_cols=190 Identities=10% Similarity=0.084 Sum_probs=101.5
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCC---CC-ccceeEEe--eCCEEEEEeeecCCCCccceEEEEeCCCCcE
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMN---LP-RCLFGSSS--LGEVAIVAGGTDKNGCILKSAELYNSELGTW 278 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp---~~-r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W 278 (457)
++.+|+.+.. ...+.+||+..+.-..++... .. ....+++. -++.+|+.+... ...+.+||+....-
T Consensus 40 ~g~l~v~~~~--~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~-----~~~i~~~d~~g~~~ 112 (286)
T 1q7f_A 40 QNDIIVADTN--NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP-----THQIQIYNQYGQFV 112 (286)
T ss_dssp TCCEEEEEGG--GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG-----GCEEEEECTTSCEE
T ss_pred CCCEEEEECC--CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC-----CCEEEEECCCCcEE
Confidence 5678886532 346899998865444443211 00 12233444 367899886321 25688899655444
Q ss_pred EECCCCCCCCcceeEEE-ECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-CC
Q 012755 279 ETLPDMNLPRKLCSGFF-MDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV-NN 356 (457)
Q Consensus 279 ~~~~~~p~~r~~~~~~~-~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~g 356 (457)
..+..... ..-..+++ -+|++|+.... ...+.+||+.......+..... .....+++.- +|
T Consensus 113 ~~~~~~~~-~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~~~~~~~~~~~----------~~~p~~i~~~~~g 175 (286)
T 1q7f_A 113 RKFGATIL-QHPRGVTVDNKGRIIVVECK------VMRVIIFDQNGNVLHKFGCSKH----------LEFPNGVVVNDKQ 175 (286)
T ss_dssp EEECTTTC-SCEEEEEECTTSCEEEEETT------TTEEEEECTTSCEEEEEECTTT----------CSSEEEEEECSSS
T ss_pred EEecCccC-CCceEEEEeCCCCEEEEECC------CCEEEEEcCCCCEEEEeCCCCc----------cCCcEEEEECCCC
Confidence 43422111 11122332 26789987532 3468889987654444422111 1111223322 58
Q ss_pred EEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEE-eCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 357 QLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKA-CGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 357 ~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~-~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
+||+.+...+.|.+||+....-..+..-.. .. . -..++. -+|+||+.....+ ..+.+|+++.
T Consensus 176 ~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~-~~---~-p~~i~~d~~G~l~v~~~~~~-----~~i~~~~~~g 238 (286)
T 1q7f_A 176 EIFISDNRAHCVKVFNYEGQYLRQIGGEGI-TN---Y-PIGVGINSNGEILIADNHNN-----FNLTIFTQDG 238 (286)
T ss_dssp EEEEEEGGGTEEEEEETTCCEEEEESCTTT-SC---S-EEEEEECTTCCEEEEECSSS-----CEEEEECTTS
T ss_pred CEEEEECCCCEEEEEcCCCCEEEEEccCCc-cC---C-CcEEEECCCCCEEEEeCCCC-----EEEEEECCCC
Confidence 999988777899999997765444432110 00 0 112322 3678888774431 1477888754
No 69
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.76 E-value=0.14 Score=52.39 Aligned_cols=291 Identities=11% Similarity=0.036 Sum_probs=134.0
Q ss_pred CCCcHHHHhhhceecccccc----CcccccChhhhhhhccCcchhhhhcccc-cccEEEEEec-CccEEEEeCCCCcEEe
Q 012755 111 PGLHDDATLDILAWSSRSDY----PTLSCLNRKFKSLIASGYLYKLRRQLGM-VEHWVYLACI-LMPWEAFDPLRQRWMR 184 (457)
Q Consensus 111 ~~LPddl~~~iLarlp~~~~----~~l~~v~k~w~~li~s~~~~~~r~~~~~-~~~~l~~~~~-~~~~~~ydp~~~~W~~ 184 (457)
..|.|+=+..+.++|-...- ..+..+.+.|..+..-..... +..+.. .++.+|+... ...+..+|..+.+-..
T Consensus 95 ~~ls~~ei~~l~~yl~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~-~~~~~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~ 173 (543)
T 1nir_A 95 GELSKEQITLMAKYIQHTPPQPPEWGMPEMRESWKVLVKPEDRPK-KQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVK 173 (543)
T ss_dssp TSSCHHHHHHHHHHTTSCCCBCCCCCHHHHHHHCEESSCGGGSCS-SCCSCCCGGGEEEEEEGGGTEEEEEETTTCCEEE
T ss_pred cCCCHHHHHHHHHHHHhcccCCCccchhhhhhhhccccccccCCc-ccccccCCCCEEEEEEcCCCeEEEEECCCceEEE
Confidence 46888877777766532211 112223333333321110000 001111 2556777654 4678889988775422
Q ss_pred CCCCCCCccccCCCeeeEEeC-CEEEEEceecCCcEEEEEEC--CCCcEEeCCCCCCCccceeEEee-----CC-EEEEE
Q 012755 185 LPRMQCDECFTSADKESLAVG-TQLLVFGRELSGFAIWMYSL--IANCWSKCPQMNLPRCLFGSSSL-----GE-VAIVA 255 (457)
Q Consensus 185 l~~~p~~~~~~~~~~~~~~~~-~~lyv~GG~~~~~~v~~yd~--~t~~W~~l~~lp~~r~~~~~~~~-----~~-~iyv~ 255 (457)
. ++.....+. ..+..+ ..+|+.+.. +.+.+||. .+.+-.. .++....-..++.- ++ .+|+.
T Consensus 174 ~--i~~g~~~~~---v~~spdg~~l~v~~~d---~~V~v~D~~~~t~~~~~--~i~~g~~p~~va~sp~~~~dg~~l~v~ 243 (543)
T 1nir_A 174 V--IDTGYAVHI---SRMSASGRYLLVIGRD---ARIDMIDLWAKEPTKVA--EIKIGIEARSVESSKFKGYEDRYTIAG 243 (543)
T ss_dssp E--EECSTTEEE---EEECTTSCEEEEEETT---SEEEEEETTSSSCEEEE--EEECCSEEEEEEECCSTTCTTTEEEEE
T ss_pred E--EecCcccce---EEECCCCCEEEEECCC---CeEEEEECcCCCCcEEE--EEecCCCcceEEeCCCcCCCCCEEEEE
Confidence 1 111111111 112334 456665532 68999999 6654322 22222222223322 34 55554
Q ss_pred eeecCCCCccceEEEEeCCCCcEEE-CCC--C--------CCCCcceeEEEE-CCEEEEEeccCCCCCCCceEEEEECCC
Q 012755 256 GGTDKNGCILKSAELYNSELGTWET-LPD--M--------NLPRKLCSGFFM-DGKFYIIGGMSSPTDPLTCGEEYNLET 323 (457)
Q Consensus 256 GG~~~~~~~~~~v~~yd~~t~~W~~-~~~--~--------p~~r~~~~~~~~-~g~iyv~GG~~~~~~~~~~~~~yd~~t 323 (457)
... ...+.++|..+.+-.. ++. + +.++........ ++.+|+... ....+..+|..+
T Consensus 244 -~~~-----~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~------~~g~i~vvd~~~ 311 (543)
T 1nir_A 244 -AYW-----PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK------ETGKVLLVNYKD 311 (543)
T ss_dssp -EEE-----SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET------TTTEEEEEECTT
T ss_pred -Ecc-----CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC------CCCeEEEEEecC
Confidence 322 2567889988876332 221 1 111211111222 345555432 235688888876
Q ss_pred CceEEcCCCCCCCCCCCCCCCCCCCCEEEE-ECCE-EEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEe
Q 012755 324 RTWKRIENMYPSNVGTQSNPAMSSPPLVAV-VNNQ-LYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKAC 401 (457)
Q Consensus 324 ~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~g~-ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~ 401 (457)
.+-..+..+.. .+..+.++. -+|+ +|+.+...+.|.++|.++++-... ++.....+.+.+..+..-
T Consensus 312 ~~~l~~~~i~~----------~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~--i~~g~~ph~g~g~~~~~p 379 (543)
T 1nir_A 312 IDNLTVTSIGA----------APFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSAL--VDVGKTPHPGRGANFVHP 379 (543)
T ss_dssp SSSCEEEEEEC----------CSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEE--EECSSSBCCTTCEEEEET
T ss_pred CCcceeEEecc----------CcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEe--eccCCCCCCCCCcccCCC
Confidence 54211111111 122222332 2555 565655678999999998864332 221111111233433322
Q ss_pred -CCEEEEEcCcCCCCCceEEEEEeeCCCCCCCCCCeeEecc
Q 012755 402 -GNSLLVIGGHRELQGEIIVLHSWDPTDGNSGEAQWNELAV 441 (457)
Q Consensus 402 -~g~lyv~GG~~~~~~~~~~v~~y~~~~~~w~~~~W~~l~~ 441 (457)
++.+|+.+.... ..|-+||.++..-....|+.+..
T Consensus 380 ~~g~~~~s~~~~d-----~~V~v~d~~~~~~~~~~~~~v~~ 415 (543)
T 1nir_A 380 KYGPVWSTSHLGD-----GSISLIGTDPKNHPQYAWKKVAE 415 (543)
T ss_dssp TTEEEEEEEBSSS-----SEEEEEECCTTTCTTTBTSEEEE
T ss_pred CCccEEEeccCCC-----ceEEEEEeCCCCCchhcCeEEEE
Confidence 478888764321 14777777663111223766544
No 70
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.75 E-value=0.5 Score=46.48 Aligned_cols=143 Identities=11% Similarity=0.133 Sum_probs=79.6
Q ss_pred CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE-CCEEEEEeccCCCCCCCceEEEEECCCCceE
Q 012755 249 GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM-DGKFYIIGGMSSPTDPLTCGEEYNLETRTWK 327 (457)
Q Consensus 249 ~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 327 (457)
++..++.|+.+ ..+.+||..+.+-...-.... ..-.+++.. ++...+.|+.+ ..+..||..+++-.
T Consensus 279 ~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~sg~~d------g~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 279 HGNIVVSGSYD------NTLIVWDVAQMKCLYILSGHT-DRIYSTIYDHERKRCISASMD------TTIRIWDLENGELM 345 (464)
T ss_dssp ETTEEEEEETT------SCEEEEETTTTEEEEEECCCS-SCEEEEEEETTTTEEEEEETT------SCEEEEETTTTEEE
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEecCCC-CCEEEEEEcCCCCEEEEEeCC------CcEEEEECCCCcEE
Confidence 44555666543 468889998776432211111 111222222 55566666543 35788999876532
Q ss_pred EcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCEEEE
Q 012755 328 RIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNSLLV 407 (457)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv 407 (457)
. .+.. .......+..++..++.++..+.+..||..+..-......... ........++++++
T Consensus 346 ~--~~~~----------h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~ 407 (464)
T 3v7d_B 346 Y--TLQG----------HTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNL------SAITTFYVSDNILV 407 (464)
T ss_dssp E--EECC----------CSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEECTTC------CCEEEEEECSSEEE
T ss_pred E--EEeC----------CCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCceeeeecCCCC------ccEEEEEeCCCEEE
Confidence 2 2211 2223344556777777887888999999988653222211111 11233455777777
Q ss_pred EcCcCCCCCceEEEEEeeCCCC
Q 012755 408 IGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 408 ~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
.|+ ++ .+.+||.+++
T Consensus 408 ~~~-dg------~i~iwd~~~g 422 (464)
T 3v7d_B 408 SGS-EN------QFNIYNLRSG 422 (464)
T ss_dssp EEE-TT------EEEEEETTTC
T ss_pred Eec-CC------eEEEEECCCC
Confidence 776 32 5889999874
No 71
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.72 E-value=0.032 Score=53.65 Aligned_cols=228 Identities=10% Similarity=0.008 Sum_probs=107.6
Q ss_pred ccEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeee--EEeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCC
Q 012755 160 EHWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKES--LAVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMN 237 (457)
Q Consensus 160 ~~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~--~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp 237 (457)
++.+++.+....+..+|..+++-....... ...|...-.. ...++..++.|+.. ..+.+||..+++-...-...
T Consensus 105 d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~--~~~h~~~V~~v~~spdg~~l~sgs~d--g~v~iwd~~~~~~~~~~~~h 180 (357)
T 4g56_B 105 EKGILVASDSGAVELWEILEKESLLVNKFA--KYEHDDIVKTLSVFSDGTQAVSGGKD--FSVKVWDLSQKAVLKSYNAH 180 (357)
T ss_dssp TTEEEEEETTSCEEEC--------CCCCEE--ECCCSSCEEEEEECSSSSEEEEEETT--SCEEEEETTTTEEEEEECCC
T ss_pred CCCEEEEECCCEEEEeeccccceeEEEeec--cCCCCCCEEEEEECCCCCEEEEEeCC--CeEEEEECCCCcEEEEEcCC
Confidence 344555555667777787665422211111 1111111111 22356666666643 35888999887643321111
Q ss_pred CCccceeEEee--CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE---CCEEEEEeccCCCCCC
Q 012755 238 LPRCLFGSSSL--GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM---DGKFYIIGGMSSPTDP 312 (457)
Q Consensus 238 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~---~g~iyv~GG~~~~~~~ 312 (457)
.. .-.+++.. ++.+++.|+.+ ..+.++|..+.+-...............+.. ++.+++.|+.+
T Consensus 181 ~~-~v~~v~~s~~~~~~~~s~~~d------g~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d----- 248 (357)
T 4g56_B 181 SS-EVNCVAACPGKDTIFLSCGED------GRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDET----- 248 (357)
T ss_dssp SS-CEEEEEECTTCSSCEEEEETT------SCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESS-----
T ss_pred CC-CEEEEEEccCCCceeeeeccC------CceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecc-----
Confidence 11 11122222 33566676644 3578889887653322222222222222333 35566666543
Q ss_pred CceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CC-EEEEEecCCCeEEEEECCCCcEEEeccCCCccC
Q 012755 313 LTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NN-QLYSADQATNVVKKYNKTNNSWTVVKRLPVRAN 389 (457)
Q Consensus 313 ~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g-~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~ 389 (457)
..+..||+.+.+-.. .+.. .......+.+ ++ ++++.|+.-+.|.+||.++.+-... +...
T Consensus 249 -~~i~~wd~~~~~~~~--~~~~----------~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~--~~H~-- 311 (357)
T 4g56_B 249 -GNVSLVNIKNPDSAQ--TSAV----------HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRD--LSHR-- 311 (357)
T ss_dssp -SCEEEEESSCGGGCE--EECC----------CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEE--CCCS--
T ss_pred -cceeEEECCCCcEeE--EEec----------cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEE--CCCC--
Confidence 347889987754211 1111 1111122233 44 5666677778899999988754332 2111
Q ss_pred CCCcceEEEEE--eCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 390 SFNGWGLAFKA--CGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 390 ~~~~~~~~~~~--~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
..-.+++- .++++++.||.++ .+.+|+....
T Consensus 312 ---~~V~~vafsP~d~~~l~s~s~Dg------~v~iW~~~~~ 344 (357)
T 4g56_B 312 ---DFVTGVAWSPLDHSKFTTVGWDH------KVLHHHLPSE 344 (357)
T ss_dssp ---SCEEEEEECSSSTTEEEEEETTS------CEEEEECC--
T ss_pred ---CCEEEEEEeCCCCCEEEEEcCCC------eEEEEECCCC
Confidence 11122222 3677888888774 4788887653
No 72
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.72 E-value=0.32 Score=45.44 Aligned_cols=192 Identities=10% Similarity=-0.002 Sum_probs=101.4
Q ss_pred cEEEEEe-cCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeE-EeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCC
Q 012755 161 HWVYLAC-ILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESL-AVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNL 238 (457)
Q Consensus 161 ~~l~~~~-~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~-~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~ 238 (457)
+.||+.. ....++.+|+... .......+. .. ..++ ..++.+|+.........++.+|+.+++.+.+...+.
T Consensus 43 g~lyv~d~~~~~I~~~d~~g~-~~~~~~~~~--~p----~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~ 115 (306)
T 2p4o_A 43 GTIFVTNHEVGEIVSITPDGN-QQIHATVEG--KV----SGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPD 115 (306)
T ss_dssp SCEEEEETTTTEEEEECTTCC-EEEEEECSS--EE----EEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTT
T ss_pred CCEEEEeCCCCeEEEECCCCc-eEEEEeCCC--Cc----eeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCC
Confidence 3466654 3567888998764 222211221 11 1122 235678886533223368899998888876654444
Q ss_pred CccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCc---EEECCC----CC-CCCcce-eEEEECCEEEEEeccCC
Q 012755 239 PRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGT---WETLPD----MN-LPRKLC-SGFFMDGKFYIIGGMSS 308 (457)
Q Consensus 239 ~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~---W~~~~~----~p-~~r~~~-~~~~~~g~iyv~GG~~~ 308 (457)
.+...+.+. .++.+|+.-. ....++++|+.+++ |..-+. .+ ...... ....-++.+|+.--
T Consensus 116 ~~~~~g~~~~~~~~~~v~d~------~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~--- 186 (306)
T 2p4o_A 116 AIFLNGITPLSDTQYLTADS------YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNT--- 186 (306)
T ss_dssp CSCEEEEEESSSSEEEEEET------TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEET---
T ss_pred ccccCcccccCCCcEEEEEC------CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeC---
Confidence 444334432 3566777531 13579999988652 321111 11 111112 22223457998742
Q ss_pred CCCCCceEEEEECCC-CceEEcCCCCCCCCCCCCCCCCCCCCEEEE-ECCEEEEEecCCCeEEEEECCCCcEEEec
Q 012755 309 PTDPLTCGEEYNLET-RTWKRIENMYPSNVGTQSNPAMSSPPLVAV-VNNQLYSADQATNVVKKYNKTNNSWTVVK 382 (457)
Q Consensus 309 ~~~~~~~~~~yd~~t-~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~g~ly~~gg~~~~v~~Yd~~~~~W~~v~ 382 (457)
..+.+.+||+.. ++......... ......+++ -+|+||+.....+.|.+||++ ++-..+.
T Consensus 187 ---~~~~I~~~~~~~~g~~~~~~~~~~----------~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~ 248 (306)
T 2p4o_A 187 ---EKMLLLRIPVDSTDKPGEPEIFVE----------QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIA 248 (306)
T ss_dssp ---TTTEEEEEEBCTTSCBCCCEEEEE----------SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEE
T ss_pred ---CCCEEEEEEeCCCCCCCccEEEec----------cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEe
Confidence 246789999875 22211110000 011122333 378999998777899999997 4444443
No 73
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.69 E-value=0.032 Score=59.64 Aligned_cols=240 Identities=7% Similarity=0.039 Sum_probs=119.6
Q ss_pred cEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEE--eC--CEEEEEceecCCcEEEEEECCCCcEEeCCCC
Q 012755 161 HWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLA--VG--TQLLVFGRELSGFAIWMYSLIANCWSKCPQM 236 (457)
Q Consensus 161 ~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~--~~--~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~l 236 (457)
..++..+....+..||....++..+..+...... -..+. .+ +..++.|+.+ ..+.+||..+++|..+..+
T Consensus 22 ~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~----V~~l~~s~~~~~~~l~s~s~D--g~I~vwd~~~~~~~~~~~~ 95 (753)
T 3jro_A 22 KRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGP----VWRVDWAHPKFGTILASCSYD--GKVLIWKEENGRWSQIAVH 95 (753)
T ss_dssp CCEEEEETTTEEEEEEEETTEEEEEEEECCCSSC----EEEEEECCTTSCSEEEEEETT--SCEEEEEEETTEEEEEEEE
T ss_pred CeEEEEECCCcEEEEecCCCCCccceeccCCcCc----eEEEEecCCCCCCEEEEEeCC--CeEEEEECCCCcccccccc
Confidence 3444444456677888776666554433211110 11122 23 5666666653 3588889988887665433
Q ss_pred CCCcc-ceeEEee-C--CEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE---------------C
Q 012755 237 NLPRC-LFGSSSL-G--EVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM---------------D 297 (457)
Q Consensus 237 p~~r~-~~~~~~~-~--~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~---------------~ 297 (457)
..... -.+++.. + +.+++.|+.+ ..+.+||..++.-.....+.........+.. +
T Consensus 96 ~~h~~~V~~v~~sp~~~~~~l~sgs~d------g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d 169 (753)
T 3jro_A 96 AVHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKE 169 (753)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGG
T ss_pred cCCCCCeEEEEECCCCCCCEEEEEeCC------CcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCC
Confidence 32222 2222222 3 6677777643 4688888876631110000000111111111 3
Q ss_pred CEEEEEeccCCCCCCCceEEEEECCCC--ceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--C---CEEEEEecCCCeEEE
Q 012755 298 GKFYIIGGMSSPTDPLTCGEEYNLETR--TWKRIENMYPSNVGTQSNPAMSSPPLVAVV--N---NQLYSADQATNVVKK 370 (457)
Q Consensus 298 g~iyv~GG~~~~~~~~~~~~~yd~~t~--~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~---g~ly~~gg~~~~v~~ 370 (457)
+.+.+.|+.+ ..+..||..++ .+..+..+.. .......+.. + +.+++.|+..+.|..
T Consensus 170 ~~~l~sgs~d------g~I~iwd~~~~~~~~~~~~~~~~----------h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~i 233 (753)
T 3jro_A 170 SRKFVTGGAD------NLVKIWKYNSDAQTYVLESTLEG----------HSDWVRDVAWSPTVLLRSYLASVSQDRTCII 233 (753)
T ss_dssp GCCEEEEETT------SCEEEEEEETTTTEEEEEEEECC----------CSSCEEEEEECCCCSSSEEEEEEESSSCEEE
T ss_pred CCEEEEEECC------CeEEEEeccCCcccceeeeeecC----------CCCcEEEEEeccCCCCCCEEEEEecCCEEEE
Confidence 5566666543 34677877654 3443333222 1222222333 4 788888888889999
Q ss_pred EECCCCc--EEEe-ccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCCCCCCCCeeEecc
Q 012755 371 YNKTNNS--WTVV-KRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDGNSGEAQWNELAV 441 (457)
Q Consensus 371 Yd~~~~~--W~~v-~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~~w~~~~W~~l~~ 441 (457)
||..+.. +... ........ .-..+ ...-++.+++.||.++ .+.+|+...+. +|..+..
T Consensus 234 wd~~~~~~~~~~~~~~~~~~~~--~v~~l-~~spdg~~l~s~s~Dg------~I~vwd~~~~~----~~~~~~~ 294 (753)
T 3jro_A 234 WTQDNEQGPWKKTLLKEEKFPD--VLWRA-SWSLSGNVLALSGGDN------KVTLWKENLEG----KWEPAGE 294 (753)
T ss_dssp EEESSSSSCCBCCBSSSSCCSS--CCCCE-EECTTTCCEEEECSSS------CEECCBCCSSS----CCBCCCC
T ss_pred ecCCCCCCcceeEEeccCCCCC--ceEEE-EEcCCCCEEEEEcCCC------EEEEEecCCCC----Ccccccc
Confidence 9988752 2111 11110110 01111 2234677788887764 47888887541 5655543
No 74
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.67 E-value=0.84 Score=48.11 Aligned_cols=117 Identities=15% Similarity=0.126 Sum_probs=72.6
Q ss_pred EEeCCEEEEEceecCCcEEEEEECCCCc--EEeCCCCCCC--------ccceeEEeeCCEEEEEeeecCCCCccceEEEE
Q 012755 202 LAVGTQLLVFGRELSGFAIWMYSLIANC--WSKCPQMNLP--------RCLFGSSSLGEVAIVAGGTDKNGCILKSAELY 271 (457)
Q Consensus 202 ~~~~~~lyv~GG~~~~~~v~~yd~~t~~--W~~l~~lp~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~y 271 (457)
++.++.||+.... ..++.+|..|++ |+.-...+.. ....+.++.+++||+... ...+..+
T Consensus 67 ~v~~g~vyv~~~~---~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-------dg~l~Al 136 (689)
T 1yiq_A 67 IVVDGVMYTTGPF---SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-------DGRLEAI 136 (689)
T ss_dssp EEETTEEEEECGG---GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEEEEE
T ss_pred EEECCEEEEEcCC---CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-------CCEEEEE
Confidence 6779999997642 358899988774 8764433211 011234567888888532 2578999
Q ss_pred eCCCCc--EEECCC-CCC--CCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCc--eEEc
Q 012755 272 NSELGT--WETLPD-MNL--PRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRT--WKRI 329 (457)
Q Consensus 272 d~~t~~--W~~~~~-~p~--~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~ 329 (457)
|.+|++ |+.-.. -+. .....+.++.++++|+-.+... ......+..||.+|++ |+.-
T Consensus 137 Da~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~-~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 137 DAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAE-FGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp ETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTT-TCCBCEEEEEETTTCCEEEEEE
T ss_pred ECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCc-cCCCCEEEEEECCCCcEEEEec
Confidence 999886 987542 111 1122344567999988432211 1134578999999886 8754
No 75
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.64 E-value=0.13 Score=55.23 Aligned_cols=187 Identities=7% Similarity=-0.001 Sum_probs=104.4
Q ss_pred EEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEE-eCCEEEEEceecCCcEEEEEECCCCcEEeCCCC-----
Q 012755 163 VYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLA-VGTQLLVFGRELSGFAIWMYSLIANCWSKCPQM----- 236 (457)
Q Consensus 163 l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~l----- 236 (457)
|++......+..||+.++++..+............ ..+.. .++.|++... ..+++||+.+++|+.....
T Consensus 420 lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v-~~i~~d~~g~lwigt~----~Gl~~~~~~~~~~~~~~~~~~~~~ 494 (795)
T 4a2l_A 420 VYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENV-YAILPDGEGNLWLGTL----SALVRFNPEQRSFTTIEKEKDGTP 494 (795)
T ss_dssp EEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCE-EEEEECSSSCEEEEES----SCEEEEETTTTEEEECCBCTTCCB
T ss_pred EEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCee-EEEEECCCCCEEEEec----CceeEEeCCCCeEEEccccccccc
Confidence 66654446788999998887766532111101111 01111 1466776432 3589999999999887532
Q ss_pred -CCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCC-C-CCC--cceeEEEE--CCEEEEEeccCC
Q 012755 237 -NLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDM-N-LPR--KLCSGFFM--DGKFYIIGGMSS 308 (457)
Q Consensus 237 -p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~-p-~~r--~~~~~~~~--~g~iyv~GG~~~ 308 (457)
+... -.++.. -++.||+... ..+.+||+.++++ ..... . ... ........ +|.|++...
T Consensus 495 ~~~~~-i~~i~~d~~g~lWigt~--------~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~--- 561 (795)
T 4a2l_A 495 VVSKQ-ITTLFRDSHKRLWIGGE--------EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR--- 561 (795)
T ss_dssp CCCCC-EEEEEECTTCCEEEEES--------SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES---
T ss_pred cCCce-EEEEEECCCCCEEEEeC--------CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC---
Confidence 1111 112222 2567777432 2478899988888 43211 1 111 11112222 577877421
Q ss_pred CCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEEec
Q 012755 309 PTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV-NNQLYSADQATNVVKKYNKTNNSWTVVK 382 (457)
Q Consensus 309 ~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~g~ly~~gg~~~~v~~Yd~~~~~W~~v~ 382 (457)
..+.+||+.++++......... + .....+++.- +|.|++.+ .+.+.+||+++++++...
T Consensus 562 -----~Gl~~~d~~~~~~~~~~~~~gl-------~-~~~i~~i~~d~~g~lWi~t--~~Gl~~~~~~~~~~~~~~ 621 (795)
T 4a2l_A 562 -----EGFYCFNEKDKQIKRYNTTNGL-------P-NNVVYGILEDSFGRLWLST--NRGISCFNPETEKFRNFT 621 (795)
T ss_dssp -----SCEEEEETTTTEEEEECGGGTC-------S-CSCEEEEEECTTSCEEEEE--TTEEEEEETTTTEEEEEC
T ss_pred -----CCceeECCCCCcEEEeCCCCCC-------c-hhheEEEEECCCCCEEEEc--CCceEEEcCCCCcEEEcC
Confidence 2478899999998876532110 0 1111222222 57888775 478999999999988764
No 76
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.60 E-value=0.18 Score=54.04 Aligned_cols=225 Identities=9% Similarity=-0.052 Sum_probs=121.1
Q ss_pred ccEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEE-eCCEEEEEceecCCcEEEEEECCCCcEEeCCCC--
Q 012755 160 EHWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLA-VGTQLLVFGRELSGFAIWMYSLIANCWSKCPQM-- 236 (457)
Q Consensus 160 ~~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~l-- 236 (457)
++.|++......+..||+.+.++..+.. +........ ..++. .++.|++. . ....+++||+.+++++.....
T Consensus 373 ~g~lWigt~~~Gl~~~~~~~~~~~~~~~-~~~~~~~~v-~~i~~d~~g~lWig-t--~~~Gl~~~~~~~~~~~~~~~~~~ 447 (781)
T 3v9f_A 373 QGKLWIGTDGGGINVFENGKRVAIYNKE-NRELLSNSV-LCSLKDSEGNLWFG-T--YLGNISYYNTRLKKFQIIELEKN 447 (781)
T ss_dssp TSCEEEEEBSSCEEEEETTEEEEECC------CCCSBE-EEEEECTTSCEEEE-E--TTEEEEEECSSSCEEEECCSTTT
T ss_pred CCCEEEEeCCCcEEEEECCCCeEEEccC-CCCCCCcce-EEEEECCCCCEEEE-e--ccCCEEEEcCCCCcEEEeccCCC
Confidence 3556655435668899998777765521 111000100 11122 25677772 1 123689999999999887532
Q ss_pred CCCccceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCC---CCcceeEEEE--CCEEEEEeccCCCC
Q 012755 237 NLPRCLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNL---PRKLCSGFFM--DGKFYIIGGMSSPT 310 (457)
Q Consensus 237 p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~---~r~~~~~~~~--~g~iyv~GG~~~~~ 310 (457)
+.. .-.++..- ++.||+... ..+.+||+.+++|+.....+. .......... +|.|++...
T Consensus 448 ~~~-~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~----- 513 (781)
T 3v9f_A 448 ELL-DVRVFYEDKNKKIWIGTH--------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF----- 513 (781)
T ss_dssp CCC-CEEEEEECTTSEEEEEET--------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES-----
T ss_pred CCC-eEEEEEECCCCCEEEEEC--------CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc-----
Confidence 211 12222222 567776421 458899999998876543221 1111112222 577776421
Q ss_pred CCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEE-ECCEEEEEecCCCeE-EEEECCCCcEEEecc---CC
Q 012755 311 DPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAV-VNNQLYSADQATNVV-KKYNKTNNSWTVVKR---LP 385 (457)
Q Consensus 311 ~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~g~ly~~gg~~~~v-~~Yd~~~~~W~~v~~---~p 385 (457)
...+.+||+.+++++........ + .....+++. -+|.|++... +.+ ..||+++++++.... +|
T Consensus 514 --~~Gl~~~~~~~~~~~~~~~~~~l-------~-~~~i~~i~~d~~g~lWi~T~--~Glv~~~d~~~~~~~~~~~~~gl~ 581 (781)
T 3v9f_A 514 --GGGVGIYTPDMQLVRKFNQYEGF-------C-SNTINQIYRSSKGQMWLATG--EGLVCFPSARNFDYQVFQRKEGLP 581 (781)
T ss_dssp --SSCEEEECTTCCEEEEECTTTTC-------S-CSCEEEEEECTTSCEEEEET--TEEEEESCTTTCCCEEECGGGTCS
T ss_pred --CCCEEEEeCCCCeEEEccCCCCC-------C-CCeeEEEEECCCCCEEEEEC--CCceEEECCCCCcEEEccccCCCC
Confidence 13478899999998877542110 0 111112222 2577887643 566 999999998877643 33
Q ss_pred CccCCCCcceEEEEE-eCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 386 VRANSFNGWGLAFKA-CGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 386 ~~~~~~~~~~~~~~~-~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
... . .+++. -+|.|++.+. . .+..|+|+++
T Consensus 582 ~~~-----i-~~i~~d~~g~lW~~t~-~-------Gl~~~~~~~~ 612 (781)
T 3v9f_A 582 NTH-----I-RAISEDKNGNIWASTN-T-------GISCYITSKK 612 (781)
T ss_dssp CCC-----C-CEEEECSSSCEEEECS-S-------CEEEEETTTT
T ss_pred Cce-----E-EEEEECCCCCEEEEcC-C-------ceEEEECCCC
Confidence 221 1 12323 3678888652 2 2667788764
No 77
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.59 E-value=0.058 Score=50.58 Aligned_cols=230 Identities=11% Similarity=0.088 Sum_probs=111.6
Q ss_pred ccEEEEEec-CccEEEEeCCCCcE--EeCCCCCCCccccCCCeeeEEeC-CEEEEEceec-CCcEEEEEECCCCcEEeCC
Q 012755 160 EHWVYLACI-LMPWEAFDPLRQRW--MRLPRMQCDECFTSADKESLAVG-TQLLVFGREL-SGFAIWMYSLIANCWSKCP 234 (457)
Q Consensus 160 ~~~l~~~~~-~~~~~~ydp~~~~W--~~l~~~p~~~~~~~~~~~~~~~~-~~lyv~GG~~-~~~~v~~yd~~t~~W~~l~ 234 (457)
...+|+... ...++.+|+.+.+. ..+..-..+. .. ..+..+ ..+| .+... ....+.+||..+++-...-
T Consensus 51 g~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~---~~--~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~ 124 (331)
T 3u4y_A 51 CSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSM---AD--VDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKFISTI 124 (331)
T ss_dssp SCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCC---CC--EEECTTSSEEE-ECCCSSSSCEEEEEETTTTEEEEEE
T ss_pred CCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCc---cc--eEECCCCCEEE-EecCCCCcccEEEEECCCCCeEEEE
Confidence 345666654 56788999987753 1111111111 10 112233 4566 33222 2238999999988765432
Q ss_pred CCCCCccceeEEee-CC-EEEEEeeecCCCCccce-EEEEeCCCCc------EEECCCCCCCCcceeEEE-ECCE-EEEE
Q 012755 235 QMNLPRCLFGSSSL-GE-VAIVAGGTDKNGCILKS-AELYNSELGT------WETLPDMNLPRKLCSGFF-MDGK-FYII 303 (457)
Q Consensus 235 ~lp~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~-v~~yd~~t~~------W~~~~~~p~~r~~~~~~~-~~g~-iyv~ 303 (457)
+. ....+.++.- ++ .+|+.+..+ .. +.+||...+. -..+ +.......++. -+|+ +|+.
T Consensus 125 ~~--~~~~~~~~~spdg~~l~~~~~~~------~~~i~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~spdg~~l~v~ 193 (331)
T 3u4y_A 125 PI--PYDAVGIAISPNGNGLILIDRSS------ANTVRRFKIDADGVLFDTGQEFI---SGGTRPFNITFTPDGNFAFVA 193 (331)
T ss_dssp EC--CTTEEEEEECTTSSCEEEEEETT------TTEEEEEEECTTCCEEEEEEEEE---CSSSSEEEEEECTTSSEEEEE
T ss_pred EC--CCCccceEECCCCCEEEEEecCC------CceEEEEEECCCCcEeecCCccc---cCCCCccceEECCCCCEEEEE
Confidence 21 1112333332 44 577765422 23 5666654321 1111 11111122222 2454 7776
Q ss_pred eccCCCCCCCceEEEEECCCCce-EEcCCCCCCCCCCCCCCCCCCCCEEEE-ECCE-EEEEecCCCeEEEEECCCCcEEE
Q 012755 304 GGMSSPTDPLTCGEEYNLETRTW-KRIENMYPSNVGTQSNPAMSSPPLVAV-VNNQ-LYSADQATNVVKKYNKTNNSWTV 380 (457)
Q Consensus 304 GG~~~~~~~~~~~~~yd~~t~~W-~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~g~-ly~~gg~~~~v~~Yd~~~~~W~~ 380 (457)
+.. ...+.+||+.+.+. ..+..++. ......++. -+|+ ||+.....+.+.+||+++++.+.
T Consensus 194 ~~~------~~~v~v~d~~~~~~~~~~~~~~~----------~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~ 257 (331)
T 3u4y_A 194 NLI------GNSIGILETQNPENITLLNAVGT----------NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSF 257 (331)
T ss_dssp ETT------TTEEEEEECSSTTSCEEEEEEEC----------SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEE
T ss_pred eCC------CCeEEEEECCCCcccceeeeccC----------CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceee
Confidence 532 35688999988775 11222222 111112332 2555 77776556779999999988766
Q ss_pred eccCCCc----cCCCCc-ceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 381 VKRLPVR----ANSFNG-WGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 381 v~~~p~~----~~~~~~-~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
+...+.. ...... .++++..-+..||+.++..+ .+.+||...
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~------~v~v~d~~~ 304 (331)
T 3u4y_A 258 VKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISR------ELKVFTISG 304 (331)
T ss_dssp EEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTT------EEEEEETTS
T ss_pred ecccccccccCCCCcccccceEECCCCCEEEEecCCCC------cEEEEEecC
Confidence 5543322 110000 11222223446777665432 588899876
No 78
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.58 E-value=0.36 Score=45.39 Aligned_cols=184 Identities=14% Similarity=0.153 Sum_probs=94.9
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEe-CCCCCCCccceeEE-eeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSK-CPQMNLPRCLFGSS-SLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLP 282 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~-l~~lp~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~ 282 (457)
++.+++.|+. ...+.+||..+++-.. +..-+.. ..+++ .-+++.++.|+.+ ..+.+||..++.-...-
T Consensus 91 ~~~~l~s~s~--D~~i~lWd~~~~~~~~~~~~~~~~--~~~~~~spdg~~l~~g~~d------g~v~i~~~~~~~~~~~~ 160 (321)
T 3ow8_A 91 TLPIAASSSL--DAHIRLWDLENGKQIKSIDAGPVD--AWTLAFSPDSQYLATGTHV------GKVNIFGVESGKKEYSL 160 (321)
T ss_dssp SSSEEEEEET--TSEEEEEETTTTEEEEEEECCTTC--CCCEEECTTSSEEEEECTT------SEEEEEETTTCSEEEEE
T ss_pred CCCEEEEEeC--CCcEEEEECCCCCEEEEEeCCCcc--EEEEEECCCCCEEEEEcCC------CcEEEEEcCCCceeEEe
Confidence 3445555554 3468888988775432 2111111 11222 2255666666543 46788888776532211
Q ss_pred CCCCCCcceeEEE-ECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCC-CCEEEE-ECCEEE
Q 012755 283 DMNLPRKLCSGFF-MDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSS-PPLVAV-VNNQLY 359 (457)
Q Consensus 283 ~~p~~r~~~~~~~-~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~-~~~~~~-~~g~ly 359 (457)
... .....+++. -+++..+.|+.+ ..+..||+.+++-... +.. ... ...++. -+++++
T Consensus 161 ~~~-~~~v~~~~~spdg~~lasg~~d------g~i~iwd~~~~~~~~~--~~~----------h~~~v~~l~~spd~~~l 221 (321)
T 3ow8_A 161 DTR-GKFILSIAYSPDGKYLASGAID------GIINIFDIATGKLLHT--LEG----------HAMPIRSLTFSPDSQLL 221 (321)
T ss_dssp ECS-SSCEEEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEE--ECC----------CSSCCCEEEECTTSCEE
T ss_pred cCC-CceEEEEEECCCCCEEEEEcCC------CeEEEEECCCCcEEEE--Ecc----------cCCceeEEEEcCCCCEE
Confidence 111 111112222 256666666543 3578899988753221 111 111 112222 267788
Q ss_pred EEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEE-EeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 360 SADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFK-ACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 360 ~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~-~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
+.|+..+.|..||..+..-... +.... ..-..++ .-+++.++.|+.++ .+.+||..+.
T Consensus 222 ~s~s~dg~i~iwd~~~~~~~~~--~~~h~----~~v~~~~~sp~~~~l~s~s~D~------~v~iwd~~~~ 280 (321)
T 3ow8_A 222 VTASDDGYIKIYDVQHANLAGT--LSGHA----SWVLNVAFCPDDTHFVSSSSDK------SVKVWDVGTR 280 (321)
T ss_dssp EEECTTSCEEEEETTTCCEEEE--ECCCS----SCEEEEEECTTSSEEEEEETTS------CEEEEETTTT
T ss_pred EEEcCCCeEEEEECCCcceeEE--EcCCC----CceEEEEECCCCCEEEEEeCCC------cEEEEeCCCC
Confidence 8888888999999987654332 21111 1111222 22567777777664 4778888763
No 79
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.55 E-value=0.37 Score=45.46 Aligned_cols=196 Identities=10% Similarity=0.080 Sum_probs=92.2
Q ss_pred cEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCc-EEeCCCC--C
Q 012755 161 HWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANC-WSKCPQM--N 237 (457)
Q Consensus 161 ~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~-W~~l~~l--p 237 (457)
..++..+....+..||..+.++.....+...... ........++..++.|+... .+.+||..+.. |.....+ +
T Consensus 65 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~d~--~v~i~d~~~~~~~~~~~~~~~~ 140 (372)
T 1k8k_C 65 NRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRA--ARCVRWAPNEKKFAVGSGSR--VISICYFEQENDWWVCKHIKKP 140 (372)
T ss_dssp TEEEEEETTSCEEEEEEETTEEEEEEECCCCSSC--EEEEEECTTSSEEEEEETTS--SEEEEEEETTTTEEEEEEECTT
T ss_pred CEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCc--eeEEEECCCCCEEEEEeCCC--EEEEEEecCCCcceeeeeeecc
Confidence 3444444456788888877765433221111000 00011122555666665433 45666665443 2221111 1
Q ss_pred CCccceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCc---------E-------EECCCCCCCCcceeEEEE--CC
Q 012755 238 LPRCLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGT---------W-------ETLPDMNLPRKLCSGFFM--DG 298 (457)
Q Consensus 238 ~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~---------W-------~~~~~~p~~r~~~~~~~~--~g 298 (457)
....-.+++.. ++..++.|+.+ ..+.+||..... | +.+..+.........+.+ ++
T Consensus 141 ~~~~i~~~~~~~~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 214 (372)
T 1k8k_C 141 IRSTVLSLDWHPNSVLLAAGSCD------FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANG 214 (372)
T ss_dssp CCSCEEEEEECTTSSEEEEEETT------SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSS
T ss_pred cCCCeeEEEEcCCCCEEEEEcCC------CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCC
Confidence 11111222222 56666776643 357788854211 1 111111111111222222 55
Q ss_pred EEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEE-EECCEEEEEecCCCeEEEEECCC--
Q 012755 299 KFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVA-VVNNQLYSADQATNVVKKYNKTN-- 375 (457)
Q Consensus 299 ~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~g~ly~~gg~~~~v~~Yd~~~-- 375 (457)
...+.|+.+ ..+..||..+.+-...-.... . ....++ .-++.+++.| ..+.+..||..+
T Consensus 215 ~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~----------~-~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~ 276 (372)
T 1k8k_C 215 SRVAWVSHD------STVCLADADKKMAVATLASET----------L-PLLAVTFITESSLVAAG-HDCFPVLFTYDSAA 276 (372)
T ss_dssp SEEEEEETT------TEEEEEEGGGTTEEEEEECSS----------C-CEEEEEEEETTEEEEEE-TTSSCEEEEEETTT
T ss_pred CEEEEEeCC------CEEEEEECCCCceeEEEccCC----------C-CeEEEEEecCCCEEEEE-eCCeEEEEEccCcC
Confidence 555555532 468889988765322211111 0 111222 3378877666 778888999888
Q ss_pred CcEEEeccC
Q 012755 376 NSWTVVKRL 384 (457)
Q Consensus 376 ~~W~~v~~~ 384 (457)
++|..+..+
T Consensus 277 ~~~~~~~~~ 285 (372)
T 1k8k_C 277 GKLSFGGRL 285 (372)
T ss_dssp TEEEECCCC
T ss_pred ceEEEeecc
Confidence 899877544
No 80
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.53 E-value=0.19 Score=49.15 Aligned_cols=233 Identities=12% Similarity=0.091 Sum_probs=107.3
Q ss_pred cEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeE--EeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCC
Q 012755 161 HWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESL--AVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNL 238 (457)
Q Consensus 161 ~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~--~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~ 238 (457)
..+...+....+..||..+.+.... +. .|...-..+ ..++.+++.|+.+. .+.+||..+.+-... +..
T Consensus 121 ~~l~s~s~Dg~i~vwd~~~~~~~~~--l~----~h~~~V~~v~~~~~~~~l~sgs~D~--~i~iwd~~~~~~~~~--~~~ 190 (410)
T 1vyh_C 121 SVMVSASEDATIKVWDYETGDFERT--LK----GHTDSVQDISFDHSGKLLASCSADM--TIKLWDFQGFECIRT--MHG 190 (410)
T ss_dssp SEEEEEESSSCEEEEETTTCCCCEE--EC----CCSSCEEEEEECTTSSEEEEEETTS--CCCEEETTSSCEEEC--CCC
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEE--Ee----ccCCcEEEEEEcCCCCEEEEEeCCC--eEEEEeCCCCceeEE--EcC
Confidence 3444444466788888876543211 11 111100112 23566777776543 467778776543221 111
Q ss_pred -CccceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE--CCEEEEEeccCCCCCCCc
Q 012755 239 -PRCLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLT 314 (457)
Q Consensus 239 -~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~ 314 (457)
...-.+++.. ++..++.|+.+ ..+.++|..++..... +.........+.. ++.+++.|+.+ .
T Consensus 191 h~~~V~~v~~~p~~~~l~s~s~D------~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~g~~l~s~s~D------~ 256 (410)
T 1vyh_C 191 HDHNVSSVSIMPNGDHIVSASRD------KTIKMWEVQTGYCVKT--FTGHREWVRMVRPNQDGTLIASCSND------Q 256 (410)
T ss_dssp CSSCEEEEEECSSSSEEEEEETT------SEEEEEETTTCCEEEE--EECCSSCEEEEEECTTSSEEEEEETT------S
T ss_pred CCCCEEEEEEeCCCCEEEEEeCC------CeEEEEECCCCcEEEE--EeCCCccEEEEEECCCCCEEEEEcCC------C
Confidence 1111122222 55666666643 4688899988764321 1111111112222 56666666643 3
Q ss_pred eEEEEECCCCceEEcCCCCCCCCC-CCCCCCC---------CCCCEEEEECCEEEEEecCCCeEEEEECCCCcEEEeccC
Q 012755 315 CGEEYNLETRTWKRIENMYPSNVG-TQSNPAM---------SSPPLVAVVNNQLYSADQATNVVKKYNKTNNSWTVVKRL 384 (457)
Q Consensus 315 ~~~~yd~~t~~W~~~~~~~~~~~~-~~~~~~~---------r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~ 384 (457)
.+..||..+......-......+. ....|.. .........++.+++.|+..+.|..||..+..= +..+
T Consensus 257 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~--~~~~ 334 (410)
T 1vyh_C 257 TVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTL 334 (410)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEE--EEEE
T ss_pred eEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCce--EEEE
Confidence 467788877654321110000000 0000000 000000111356777787888999999987642 2111
Q ss_pred CCccCCCCcceEEEE-EeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 385 PVRANSFNGWGLAFK-ACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 385 p~~~~~~~~~~~~~~-~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
.... ..-..+. .-+++.++.||.++ .+.+||..+.
T Consensus 335 ~~h~----~~v~~v~~~~~g~~l~s~s~D~------~i~vwd~~~~ 370 (410)
T 1vyh_C 335 VGHD----NWVRGVLFHSGGKFILSCADDK------TLRVWDYKNK 370 (410)
T ss_dssp ECCS----SCEEEEEECSSSSCEEEEETTT------EEEEECCTTS
T ss_pred ECCC----CcEEEEEEcCCCCEEEEEeCCC------eEEEEECCCC
Confidence 1111 1111222 23566777777653 5888988663
No 81
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.53 E-value=0.061 Score=50.15 Aligned_cols=190 Identities=9% Similarity=-0.010 Sum_probs=98.3
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPD 283 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~ 283 (457)
++.||+.+. ....+++||+.+++-+.... +. + -.+++. -++++|+.. ...+.+||+.+++++.+..
T Consensus 24 ~~~l~~~d~--~~~~i~~~d~~~~~~~~~~~-~~-~-~~~i~~~~dG~l~v~~--------~~~l~~~d~~~g~~~~~~~ 90 (297)
T 3g4e_A 24 SNSLLFVDI--PAKKVCRWDSFTKQVQRVTM-DA-P-VSSVALRQSGGYVATI--------GTKFCALNWKEQSAVVLAT 90 (297)
T ss_dssp TTEEEEEET--TTTEEEEEETTTCCEEEEEC-SS-C-EEEEEEBTTSSEEEEE--------TTEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEEC--CCCEEEEEECCCCcEEEEeC-CC-c-eEEEEECCCCCEEEEE--------CCeEEEEECCCCcEEEEEe
Confidence 466777642 24578999999886544321 11 1 122222 256666652 1468999999999877644
Q ss_pred CCC--CCcceeEEEE--CCEEEEEeccCCC-----CCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE
Q 012755 284 MNL--PRKLCSGFFM--DGKFYIIGGMSSP-----TDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV 354 (457)
Q Consensus 284 ~p~--~r~~~~~~~~--~g~iyv~GG~~~~-----~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 354 (457)
... +......+.+ +|++|+..-.... ......++.+|+.. +...+..... ...+++..
T Consensus 91 ~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~------------~pngi~~s 157 (297)
T 3g4e_A 91 VDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVD------------ISNGLDWS 157 (297)
T ss_dssp CCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEES------------BEEEEEEC
T ss_pred cCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeeccc------------cccceEEc
Confidence 322 1111222222 6888874311110 01235678888753 3333321111 11123332
Q ss_pred -CC-EEEEEecCCCeEEEEEC--CCCcEEE---eccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCC
Q 012755 355 -NN-QLYSADQATNVVKKYNK--TNNSWTV---VKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPT 427 (457)
Q Consensus 355 -~g-~ly~~gg~~~~v~~Yd~--~~~~W~~---v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~ 427 (457)
++ .||+.....+.|++||. +++.... +..++...... .++ .+.-+|+||+..... ..+.+||++
T Consensus 158 pdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p--~g~-~~d~~G~lwva~~~~------~~v~~~d~~ 228 (297)
T 3g4e_A 158 LDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIP--DGM-CIDAEGKLWVACYNG------GRVIRLDPV 228 (297)
T ss_dssp TTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEE--EEE-EEBTTSCEEEEEETT------TEEEEECTT
T ss_pred CCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCC--Cee-EECCCCCEEEEEcCC------CEEEEEcCC
Confidence 44 68888877788999985 5555432 22222111100 112 122467888875221 148889998
Q ss_pred CC
Q 012755 428 DG 429 (457)
Q Consensus 428 ~~ 429 (457)
++
T Consensus 229 tG 230 (297)
T 3g4e_A 229 TG 230 (297)
T ss_dssp TC
T ss_pred Cc
Confidence 64
No 82
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.50 E-value=0.067 Score=48.58 Aligned_cols=188 Identities=7% Similarity=-0.069 Sum_probs=97.6
Q ss_pred ecCccEEEEeCCC-CcEEeCCCCCCCccccCCCeeeEEeCCEEEEEcee--cCCcEEEEEECCCCcEEeCCCCCCCccce
Q 012755 167 CILMPWEAFDPLR-QRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRE--LSGFAIWMYSLIANCWSKCPQMNLPRCLF 243 (457)
Q Consensus 167 ~~~~~~~~ydp~~-~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~--~~~~~v~~yd~~t~~W~~l~~lp~~r~~~ 243 (457)
+....++.+|..+ .+...+...+....... .....++..+++++. .....++.++..++.-+.+..... ..
T Consensus 59 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~---~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~ 132 (297)
T 2ojh_A 59 NSEGLLYRLSLAGDPSPEKVDTGFATICNND---HGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLP---SY 132 (297)
T ss_dssp EETTEEEEEESSSCCSCEECCCTTCCCBCSC---CEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSS---EE
T ss_pred EcCCeEEEEeCCCCCCceEeccccccccccc---eEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCC---cc
Confidence 3356788899888 76665543321111111 123345555555552 235689999988877666543221 12
Q ss_pred eEEee-CC-EEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEE-ECCE-EEEEeccCCCCCCCceEEEE
Q 012755 244 GSSSL-GE-VAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFF-MDGK-FYIIGGMSSPTDPLTCGEEY 319 (457)
Q Consensus 244 ~~~~~-~~-~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~g~-iyv~GG~~~~~~~~~~~~~y 319 (457)
.++.. ++ .|++.++.++ ...++.+|..++....+...+.. ...... -+|+ |++.+..++ ...++.+
T Consensus 133 ~~~~spdg~~l~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~~~~----~~~i~~~ 202 (297)
T 2ojh_A 133 WHGWSPDGKSFTYCGIRDQ----VFDIYSMDIDSGVETRLTHGEGR--NDGPDYSPDGRWIYFNSSRTG----QMQIWRV 202 (297)
T ss_dssp EEEECTTSSEEEEEEEETT----EEEEEEEETTTCCEEECCCSSSC--EEEEEECTTSSEEEEEECTTS----SCEEEEE
T ss_pred ceEECCCCCEEEEEECCCC----ceEEEEEECCCCcceEcccCCCc--cccceECCCCCEEEEEecCCC----CccEEEE
Confidence 22222 34 4555555432 24677788888877766543221 111222 2555 444433222 3467778
Q ss_pred ECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecC-----------CCeEEEEECCCCcEEEecc
Q 012755 320 NLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQA-----------TNVVKKYNKTNNSWTVVKR 383 (457)
Q Consensus 320 d~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~-----------~~~v~~Yd~~~~~W~~v~~ 383 (457)
++.+.....+..... ....+.. +|+.+++++. ...++.||.++++...+..
T Consensus 203 ~~~~~~~~~~~~~~~-------------~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 203 RVDGSSVERITDSAY-------------GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp ETTSSCEEECCCCSE-------------EEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEE
T ss_pred CCCCCCcEEEecCCc-------------ccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeec
Confidence 877777666543211 1111222 5554433322 1469999999887766553
No 83
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.48 E-value=0.082 Score=50.63 Aligned_cols=227 Identities=8% Similarity=-0.011 Sum_probs=108.6
Q ss_pred cEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeE--EeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCC
Q 012755 161 HWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESL--AVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNL 238 (457)
Q Consensus 161 ~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~--~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~ 238 (457)
..+...+....+..+|..+++-....... ...|...-..+ ..++..++.|+... .+.+||..+++-...-.-.
T Consensus 94 ~~l~~~s~dg~v~lWd~~~~~~~~~~~~~--~~~H~~~V~~v~~spdg~~l~sgs~d~--~i~iwd~~~~~~~~~~~~h- 168 (344)
T 4gqb_B 94 RGILVASDSGAVELWELDENETLIVSKFC--KYEHDDIVSTVSVLSSGTQAVSGSKDI--CIKVWDLAQQVVLSSYRAH- 168 (344)
T ss_dssp TEEEEEETTSEEEEEEECTTSSCEEEEEE--EECCSSCEEEEEECTTSSEEEEEETTS--CEEEEETTTTEEEEEECCC-
T ss_pred CeEEEEECCCEEEEEeccCCCceeEeecc--ccCCCCCEEEEEECCCCCEEEEEeCCC--eEEEEECCCCcEEEEEcCc-
Confidence 44554455666778887765421111000 00111100112 23566667676543 5888999887543221101
Q ss_pred CccceeEEe-e-CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcce-eEEEE--CCEEEEEeccCCCCCCC
Q 012755 239 PRCLFGSSS-L-GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLC-SGFFM--DGKFYIIGGMSSPTDPL 313 (457)
Q Consensus 239 ~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~-~~~~~--~g~iyv~GG~~~~~~~~ 313 (457)
...-.+++. . +..+++.|+.+ ..+.++|..+.+-...-......... +++.. ++++++.|+.+
T Consensus 169 ~~~V~~~~~~~~~~~~l~s~s~D------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d------ 236 (344)
T 4gqb_B 169 AAQVTCVAASPHKDSVFLSCSED------NRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN------ 236 (344)
T ss_dssp SSCEEEEEECSSCTTEEEEEETT------SCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETT------
T ss_pred CCceEEEEecCCCCCceeeeccc------cccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccC------
Confidence 111112222 1 34577777654 35788999887643221111111111 22222 45677776543
Q ss_pred ceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CC-EEEEEecCCCeEEEEECCCCcEEEeccCCCccCC
Q 012755 314 TCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NN-QLYSADQATNVVKKYNKTNNSWTVVKRLPVRANS 390 (457)
Q Consensus 314 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g-~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~ 390 (457)
..+..||..+.+- +..+.. .......+.+ ++ ++++.|+.-+.|.+||..+++-.....
T Consensus 237 g~v~~wd~~~~~~--~~~~~~----------h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~------- 297 (344)
T 4gqb_B 237 GTVSLVDTKSTSC--VLSSAV----------HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQA------- 297 (344)
T ss_dssp SEEEEEESCC--C--CEEEEC----------CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECC-------
T ss_pred CcEEEEECCCCcE--EEEEcC----------CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcC-------
Confidence 3578899887542 111111 1112222333 44 566667777889999998875332211
Q ss_pred CCcceEEEEE--eCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 391 FNGWGLAFKA--CGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 391 ~~~~~~~~~~--~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
|...-..++- .+..|++.||.++ .|.+|+..++
T Consensus 298 H~~~V~~v~~sp~~~~llas~s~D~------~v~~w~v~~~ 332 (344)
T 4gqb_B 298 HRDFVRDATWSPLNHSLLTTVGWDH------QVVHHVVPTE 332 (344)
T ss_dssp CSSCEEEEEECSSSTTEEEEEETTS------CEEEEECCC-
T ss_pred CCCCEEEEEEeCCCCeEEEEEcCCC------eEEEEECCCC
Confidence 1111112222 2446777788774 4777887763
No 84
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.46 E-value=0.49 Score=48.85 Aligned_cols=116 Identities=10% Similarity=0.071 Sum_probs=68.1
Q ss_pred EEeCCEEEEEceecCCcEEEEEECCCCc--EEeCCCCCCC---cc---ceeEEeeCCEEEEEeeecCCCCccceEEEEeC
Q 012755 202 LAVGTQLLVFGRELSGFAIWMYSLIANC--WSKCPQMNLP---RC---LFGSSSLGEVAIVAGGTDKNGCILKSAELYNS 273 (457)
Q Consensus 202 ~~~~~~lyv~GG~~~~~~v~~yd~~t~~--W~~l~~lp~~---r~---~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~ 273 (457)
++.++.||+.... ..++.+|..|++ |+.-...+.. .+ ..+.++.+++||+... ...+..+|.
T Consensus 65 ~v~~g~vyv~~~~---~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~-------dg~l~AlD~ 134 (582)
T 1flg_A 65 IVSDGVIYVTASY---SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL-------DASVVALNK 134 (582)
T ss_dssp EEETTEEEEEETT---TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET-------TTEEEEEES
T ss_pred EEECCEEEEEcCC---CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC-------CCEEEEEEC
Confidence 6679999987542 248999998775 8764332211 11 1234567889888531 257899999
Q ss_pred CCCc--EEECCCCCCC--CcceeEEEECC------EEEEEeccCCCCCCCceEEEEECCCCc--eEE
Q 012755 274 ELGT--WETLPDMNLP--RKLCSGFFMDG------KFYIIGGMSSPTDPLTCGEEYNLETRT--WKR 328 (457)
Q Consensus 274 ~t~~--W~~~~~~p~~--r~~~~~~~~~g------~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~ 328 (457)
+|++ |+.-...+.. ....+.++.++ .+|+- ...........+..||+++++ |+.
T Consensus 135 ~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg-~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 135 NTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHG-SSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp SSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEEC-CBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred CCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEe-ccccccCCCCEEEEEECCCCCEEeec
Confidence 9886 9864221111 11223345566 77663 211111124578999999875 864
No 85
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.46 E-value=0.14 Score=47.69 Aligned_cols=220 Identities=9% Similarity=0.021 Sum_probs=109.8
Q ss_pred cEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCc
Q 012755 161 HWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPR 240 (457)
Q Consensus 161 ~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r 240 (457)
..++..+....+..||..+.+......+........ ......++..++.|+.. ..+.+||..+++....-.....
T Consensus 110 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~l~~~~~d--g~v~~~d~~~~~~~~~~~~~~~- 184 (337)
T 1gxr_A 110 CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACY--ALAISPDSKVCFSCCSD--GNIAVWDLHNQTLVRQFQGHTD- 184 (337)
T ss_dssp SEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEE--EEEECTTSSEEEEEETT--SCEEEEETTTTEEEEEECCCSS-
T ss_pred CEEEEEcCCCcEEEEECCCCCcceeeecccCCCceE--EEEECCCCCEEEEEeCC--CcEEEEeCCCCceeeeeecccC-
Confidence 345544546678889988776433222111100000 00112255555666543 3588999988765432111111
Q ss_pred cceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEE-ECCEEEEEeccCCCCCCCceEEE
Q 012755 241 CLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFF-MDGKFYIIGGMSSPTDPLTCGEE 318 (457)
Q Consensus 241 ~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~g~iyv~GG~~~~~~~~~~~~~ 318 (457)
.-.+++.. ++..++.|+.+ ..+.+||..+++-...-..+. ....++. -+++.+++|+.+ ..+..
T Consensus 185 ~i~~~~~~~~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~~------~~i~~ 250 (337)
T 1gxr_A 185 GASCIDISNDGTKLWTGGLD------NTVRSWDLREGRQLQQHDFTS--QIFSLGYCPTGEWLAVGMES------SNVEV 250 (337)
T ss_dssp CEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEECSS--CEEEEEECTTSSEEEEEETT------SCEEE
T ss_pred ceEEEEECCCCCEEEEEecC------CcEEEEECCCCceEeeecCCC--ceEEEEECCCCCEEEEEcCC------CcEEE
Confidence 11222222 55666666633 468899998876433211111 1122222 256666666532 35788
Q ss_pred EECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceE
Q 012755 319 YNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGL 396 (457)
Q Consensus 319 yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~ 396 (457)
||..+..-..+... ......+.. ++++++.++..+.+..||.++++-......... -.
T Consensus 251 ~~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~-------v~ 310 (337)
T 1gxr_A 251 LHVNKPDKYQLHLH-------------ESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSS-------VL 310 (337)
T ss_dssp EETTSSCEEEECCC-------------SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSC-------EE
T ss_pred EECCCCCeEEEcCC-------------ccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEecCCCc-------EE
Confidence 99887654333221 111222222 577777787888999999988764432211111 11
Q ss_pred EE-EEeCCEEEEEcCcCCCCCceEEEEEee
Q 012755 397 AF-KACGNSLLVIGGHRELQGEIIVLHSWD 425 (457)
Q Consensus 397 ~~-~~~~g~lyv~GG~~~~~~~~~~v~~y~ 425 (457)
.+ ..-+++.++.|+.++ .+.+|+
T Consensus 311 ~~~~s~~~~~l~~~~~dg------~i~iw~ 334 (337)
T 1gxr_A 311 SCDISVDDKYIVTGSGDK------KATVYE 334 (337)
T ss_dssp EEEECTTSCEEEEEETTS------CEEEEE
T ss_pred EEEECCCCCEEEEecCCC------eEEEEE
Confidence 12 223567777776653 355565
No 86
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.45 E-value=0.37 Score=45.45 Aligned_cols=230 Identities=9% Similarity=0.060 Sum_probs=108.9
Q ss_pred cEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCcEEeCCCC-CCC
Q 012755 161 HWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQM-NLP 239 (457)
Q Consensus 161 ~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~l-p~~ 239 (457)
..+++.+....+..||..+.++..+..+...... ........++.+++.|+.. ..+.+||..++++.....+ ...
T Consensus 21 ~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~--v~~~~~~~~~~~l~~~~~d--g~i~vwd~~~~~~~~~~~~~~~~ 96 (372)
T 1k8k_C 21 TQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQ--VTGVDWAPDSNRIVTCGTD--RNAYVWTLKGRTWKPTLVILRIN 96 (372)
T ss_dssp SEEEEECSSSEEEEEEEETTEEEEEEEEECCSSC--EEEEEEETTTTEEEEEETT--SCEEEEEEETTEEEEEEECCCCS
T ss_pred CEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCc--ccEEEEeCCCCEEEEEcCC--CeEEEEECCCCeeeeeEEeecCC
Confidence 3444444567788899888765444333211110 0001122355666666543 3588889888876544222 112
Q ss_pred ccceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCc-EEECCCCCCC--CcceeEEEE-CCEEEEEeccCCCCCCCc
Q 012755 240 RCLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGT-WETLPDMNLP--RKLCSGFFM-DGKFYIIGGMSSPTDPLT 314 (457)
Q Consensus 240 r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~-W~~~~~~p~~--r~~~~~~~~-~g~iyv~GG~~~~~~~~~ 314 (457)
..-.+++.. ++..++.|+.+ ..+.+||..+.. |........+ ..-.+++.. ++..++.|+.+ .
T Consensus 97 ~~v~~~~~~~~~~~l~~~~~d------~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------g 164 (372)
T 1k8k_C 97 RAARCVRWAPNEKKFAVGSGS------RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD------F 164 (372)
T ss_dssp SCEEEEEECTTSSEEEEEETT------SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT------S
T ss_pred CceeEEEECCCCCEEEEEeCC------CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC------C
Confidence 122222222 56666666643 345666665543 3322111111 111222222 56666666543 3
Q ss_pred eEEEEECCCCc---------e-------EEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCC
Q 012755 315 CGEEYNLETRT---------W-------KRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNN 376 (457)
Q Consensus 315 ~~~~yd~~t~~---------W-------~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~ 376 (457)
.+..||..... | ..+..+.. .......+.+ ++..++.++..+.+..||..+.
T Consensus 165 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 234 (372)
T 1k8k_C 165 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS----------SCGWVHGVCFSANGSRVAWVSHDSTVCLADADKK 234 (372)
T ss_dssp CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC----------CSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGT
T ss_pred CEEEEEcccccccccccccccccccchhhheEecCC----------CCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 56778864221 1 11111111 1111222333 6667777777889999999876
Q ss_pred cEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 377 SWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 377 ~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
+-... +...... -..+ ...-++++++.| .++ .+.+|+...
T Consensus 235 ~~~~~--~~~~~~~--v~~~-~~~~~~~~l~~~-~d~------~i~i~~~~~ 274 (372)
T 1k8k_C 235 MAVAT--LASETLP--LLAV-TFITESSLVAAG-HDC------FPVLFTYDS 274 (372)
T ss_dssp TEEEE--EECSSCC--EEEE-EEEETTEEEEEE-TTS------SCEEEEEET
T ss_pred ceeEE--EccCCCC--eEEE-EEecCCCEEEEE-eCC------eEEEEEccC
Confidence 53322 1111100 1111 223477777766 432 256677665
No 87
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.44 E-value=1.1 Score=46.88 Aligned_cols=117 Identities=13% Similarity=0.087 Sum_probs=72.1
Q ss_pred EEeCCEEEEEceecCCcEEEEEECCCCc--EEeCCCCCCCc--------cceeEEeeCCEEEEEeeecCCCCccceEEEE
Q 012755 202 LAVGTQLLVFGRELSGFAIWMYSLIANC--WSKCPQMNLPR--------CLFGSSSLGEVAIVAGGTDKNGCILKSAELY 271 (457)
Q Consensus 202 ~~~~~~lyv~GG~~~~~~v~~yd~~t~~--W~~l~~lp~~r--------~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~y 271 (457)
++.++.||+... ...++.+|..|++ |+.-+..+... ...+.++.+++||+... ...+..+
T Consensus 63 ~v~~g~vyv~~~---~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------dg~l~al 132 (668)
T 1kv9_A 63 LFHDGVIYTSMS---WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-------DGRLIAL 132 (668)
T ss_dssp EEETTEEEEEEG---GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-------TSEEEEE
T ss_pred EEECCEEEEECC---CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-------CCEEEEE
Confidence 677999998754 2468889988774 87654332110 11234556888887532 2578999
Q ss_pred eCCCCc--EEECCCCCC--CCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCc--eEEc
Q 012755 272 NSELGT--WETLPDMNL--PRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRT--WKRI 329 (457)
Q Consensus 272 d~~t~~--W~~~~~~p~--~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~ 329 (457)
|.+|++ |+.-..-+. .....+.++.++++|+-.+... ......+..||++|++ |+.-
T Consensus 133 D~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~-~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 133 DAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAE-YGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp ETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTT-TCCBCEEEEEETTTCCEEEEEE
T ss_pred ECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCC-cCCCCEEEEEECCCCcEEEEec
Confidence 999886 986432111 1122344567999987432211 1134578999999875 8753
No 88
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.43 E-value=0.17 Score=47.05 Aligned_cols=220 Identities=10% Similarity=0.051 Sum_probs=110.0
Q ss_pred ccEEEEEec-CccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCC
Q 012755 160 EHWVYLACI-LMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNL 238 (457)
Q Consensus 160 ~~~l~~~~~-~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~ 238 (457)
+..+|+... ...++.||+.+.....+. .+... . ......++.+++.. ...+++||+.+++++.+...+.
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~~--~---~i~~~~dG~l~v~~----~~~l~~~d~~~g~~~~~~~~~~ 93 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQRVT-MDAPV--S---SVALRQSGGYVATI----GTKFCALNWKEQSAVVLATVDN 93 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEE-CSSCE--E---EEEEBTTSSEEEEE----TTEEEEEETTTTEEEEEEECCT
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEe-CCCce--E---EEEECCCCCEEEEE----CCeEEEEECCCCcEEEEEecCC
Confidence 345666543 567889999887554332 11110 0 01122356666543 3579999999998877643321
Q ss_pred ----CccceeEEeeCCEEEEEeeecCC-----CCccceEEEEeCCCCcEEEC-CCCCCCCcceeEEEE-CC-EEEEEecc
Q 012755 239 ----PRCLFGSSSLGEVAIVAGGTDKN-----GCILKSAELYNSELGTWETL-PDMNLPRKLCSGFFM-DG-KFYIIGGM 306 (457)
Q Consensus 239 ----~r~~~~~~~~~~~iyv~GG~~~~-----~~~~~~v~~yd~~t~~W~~~-~~~p~~r~~~~~~~~-~g-~iyv~GG~ 306 (457)
.+.....+.-++++|+..-.... ......++++|+.. +...+ ..+.. ....+.. ++ .+|+....
T Consensus 94 ~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~---pngi~~spdg~~lyv~~~~ 169 (297)
T 3g4e_A 94 DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDI---SNGLDWSLDHKIFYYIDSL 169 (297)
T ss_dssp TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESB---EEEEEECTTSCEEEEEEGG
T ss_pred CCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeecccc---ccceEEcCCCCEEEEecCC
Confidence 12222222236778774321110 01235788888753 33322 11111 1122222 34 58887532
Q ss_pred CCCCCCCceEEEEEC--CCCceEEc---CCCCCCCCCCCCCCCCCCCCEEEE-ECCEEEEEecCCCeEEEEECCCCcEEE
Q 012755 307 SSPTDPLTCGEEYNL--ETRTWKRI---ENMYPSNVGTQSNPAMSSPPLVAV-VNNQLYSADQATNVVKKYNKTNNSWTV 380 (457)
Q Consensus 307 ~~~~~~~~~~~~yd~--~t~~W~~~---~~~~~~~~~~~~~~~~r~~~~~~~-~~g~ly~~gg~~~~v~~Yd~~~~~W~~ 380 (457)
...+++||. .++..... ...... .....++++ -+|.||+.....+.|.+||+++++-..
T Consensus 170 ------~~~i~~~~~d~~~G~~~~~~~~~~~~~~---------~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 170 ------SYSVDAFDYDLQTGQISNRRSVYKLEKE---------EQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQ 234 (297)
T ss_dssp ------GTEEEEEEECTTTCCEEEEEEEEECCGG---------GCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEE
T ss_pred ------CCcEEEEeccCCCCcccCcEEEEECCCC---------CCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEE
Confidence 346778875 55554321 111110 011112333 268999887656789999999776554
Q ss_pred eccCCCccCCCCcceEEEE-EeCCEEEEEcCcC
Q 012755 381 VKRLPVRANSFNGWGLAFK-ACGNSLLVIGGHR 412 (457)
Q Consensus 381 v~~~p~~~~~~~~~~~~~~-~~~g~lyv~GG~~ 412 (457)
.-.+|.... ..+++. .-++.|||.....
T Consensus 235 ~i~~p~~~~----t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 235 TVKLPVDKT----TSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EEECSSSBE----EEEEEESGGGCEEEEEEBCT
T ss_pred EEECCCCCc----eEEEEeCCCCCEEEEEcCCc
Confidence 434443221 112211 1124889887554
No 89
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.43 E-value=0.25 Score=52.65 Aligned_cols=225 Identities=12% Similarity=0.087 Sum_probs=111.9
Q ss_pred ccEEEEEecCccEEEEeCCCCcEEe-CCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCcEEeC-CCCC
Q 012755 160 EHWVYLACILMPWEAFDPLRQRWMR-LPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANCWSKC-PQMN 237 (457)
Q Consensus 160 ~~~l~~~~~~~~~~~ydp~~~~W~~-l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l-~~lp 237 (457)
..++.+.+....+..||..+.+... +.....+ ........++..++.|+. ...+.+||..+++.... ....
T Consensus 25 ~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~-----v~~~~~s~~~~~l~~~~~--dg~i~vw~~~~~~~~~~~~~~~ 97 (814)
T 3mkq_A 25 EPWVLTTLYSGRVEIWNYETQVEVRSIQVTETP-----VRAGKFIARKNWIIVGSD--DFRIRVFNYNTGEKVVDFEAHP 97 (814)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSSC-----EEEEEEEGGGTEEEEEET--TSEEEEEETTTCCEEEEEECCS
T ss_pred CCEEEEEeCCCEEEEEECCCCceEEEEecCCCc-----EEEEEEeCCCCEEEEEeC--CCeEEEEECCCCcEEEEEecCC
Confidence 4455555555678888987764322 1111110 001122335556666654 34789999988775432 2111
Q ss_pred CCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCC-cEEECCCCCCCCcceeEEEE--CCEEEEEeccCCCCCCC
Q 012755 238 LPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELG-TWETLPDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPL 313 (457)
Q Consensus 238 ~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~-~W~~~~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~ 313 (457)
. .-.+++. -++..++.|+.+ ..+.+||..++ .....-. .....-.+++.. ++.+++.|+.+
T Consensus 98 ~--~v~~~~~s~~~~~l~~~~~d------g~i~vw~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~d------ 162 (814)
T 3mkq_A 98 D--YIRSIAVHPTKPYVLSGSDD------LTVKLWNWENNWALEQTFE-GHEHFVMCVAFNPKDPSTFASGCLD------ 162 (814)
T ss_dssp S--CEEEEEECSSSSEEEEEETT------SEEEEEEGGGTSEEEEEEE-CCSSCEEEEEEETTEEEEEEEEETT------
T ss_pred C--CEEEEEEeCCCCEEEEEcCC------CEEEEEECCCCceEEEEEc-CCCCcEEEEEEEcCCCCEEEEEeCC------
Confidence 1 1112222 245555555532 46888888776 3322111 011111223333 45666666543
Q ss_pred ceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE---CCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCC
Q 012755 314 TCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV---NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANS 390 (457)
Q Consensus 314 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~ 390 (457)
..+..||..+..-........ ......++.. ++.+++.|+..+.+..||..+..-... +....
T Consensus 163 g~v~vwd~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~--~~~~~-- 228 (814)
T 3mkq_A 163 RTVKVWSLGQSTPNFTLTTGQ----------ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVAT--LEGHM-- 228 (814)
T ss_dssp SEEEEEETTCSSCSEEEECCC----------TTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEE--EECCS--
T ss_pred CeEEEEECCCCcceeEEecCC----------CCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEE--EcCCC--
Confidence 467889986654221111000 1112222222 677888888888999999987653221 11111
Q ss_pred CCcceEEE-EEeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 391 FNGWGLAF-KACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 391 ~~~~~~~~-~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
..-..+ ..-++.+++.|+.++ .+.+||..+
T Consensus 229 --~~v~~~~~~~~~~~l~~~~~dg------~v~vwd~~~ 259 (814)
T 3mkq_A 229 --SNVSFAVFHPTLPIIISGSEDG------TLKIWNSST 259 (814)
T ss_dssp --SCEEEEEECSSSSEEEEEETTS------CEEEEETTT
T ss_pred --CCEEEEEEcCCCCEEEEEeCCC------eEEEEECCC
Confidence 111112 223566777777653 477888876
No 90
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.42 E-value=1.1 Score=47.81 Aligned_cols=236 Identities=9% Similarity=0.097 Sum_probs=120.4
Q ss_pred ccEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCC-eeeEE-eCCEEEEEceecCCcEEEEEECCCCcEEeCCCCC
Q 012755 160 EHWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSAD-KESLA-VGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMN 237 (457)
Q Consensus 160 ~~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~-~~~~~-~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp 237 (457)
++.|++......+..||+.+..+..+...+.+....... ..++. .++.|++. .. ...+.+||+.+++++.....+
T Consensus 320 ~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiG-t~--~~Gl~~~~~~~~~~~~~~~~~ 396 (795)
T 4a2l_A 320 QGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIG-TN--DGGLNLYNPITQRFTSYTLQE 396 (795)
T ss_dssp TSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEE-ES--SSCEEEECTTTCCEEEECCC-
T ss_pred CcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEE-EC--CCCeEEEcCCCCcEEEEecCC
Confidence 345555443467888888877766554333211111100 01111 24667763 11 124889999999887764221
Q ss_pred -------CCccceeEEee-CCE-EEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCC--cceeEEEE--CCEEEEEe
Q 012755 238 -------LPRCLFGSSSL-GEV-AIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPR--KLCSGFFM--DGKFYIIG 304 (457)
Q Consensus 238 -------~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r--~~~~~~~~--~g~iyv~G 304 (457)
....-.+++.- ++. ||+ |.. ...+.+||+.+++++......... ........ +|.|++-.
T Consensus 397 ~~~~~~l~~~~v~~i~~d~~g~~lWi-gt~------~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt 469 (795)
T 4a2l_A 397 DESARGIGSNNIKAVYVDEKKSLVYI-GTH------AGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT 469 (795)
T ss_dssp -----CCSCSCEEEEEEETTTTEEEE-EET------TTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE
T ss_pred CCcccCCCCccEEEEEEcCCCCEEEE-EeC------cCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe
Confidence 01112233322 566 666 322 135789999999887764321111 11112222 57777743
Q ss_pred ccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEE-ECCEEEEEecCCCeEEEEECCCCcEEEecc
Q 012755 305 GMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAV-VNNQLYSADQATNVVKKYNKTNNSWTVVKR 383 (457)
Q Consensus 305 G~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~ 383 (457)
. ..+.+||+.+++|+.+.....+. .........+.. -+|.|++... +.+.+||+.++.+ ....
T Consensus 470 ~--------~Gl~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~-~~~~ 533 (795)
T 4a2l_A 470 L--------SALVRFNPEQRSFTTIEKEKDGT-----PVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI-QKAS 533 (795)
T ss_dssp S--------SCEEEEETTTTEEEECCBCTTCC-----BCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE-EECC
T ss_pred c--------CceeEEeCCCCeEEEcccccccc-----ccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE-EEec
Confidence 1 34788999999998875431100 000011111222 2577887653 6799999999888 4432
Q ss_pred CCCccCCCCcceEEEEE-eCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 384 LPVRANSFNGWGLAFKA-CGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 384 ~p~~~~~~~~~~~~~~~-~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
.+.........-.++.. .+|.|++-.. . -+..||+.++
T Consensus 534 ~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-------Gl~~~d~~~~ 572 (795)
T 4a2l_A 534 ILPVSNVTKLFTNCIYEASNGIIWVGTR-E-------GFYCFNEKDK 572 (795)
T ss_dssp CSCSCGGGGSCEEEEEECTTSCEEEEES-S-------CEEEEETTTT
T ss_pred CCCCCCCCCCeeEEEEECCCCCEEEEeC-C-------CceeECCCCC
Confidence 10000000011122333 3678887542 1 1777888765
No 91
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.42 E-value=0.3 Score=47.34 Aligned_cols=225 Identities=12% Similarity=0.061 Sum_probs=114.1
Q ss_pred cEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCcE--EeCCCCCC
Q 012755 161 HWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANCW--SKCPQMNL 238 (457)
Q Consensus 161 ~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W--~~l~~lp~ 238 (457)
..+++.+....+..||..+.+....- . .+...-..+..++.+++.|+.. ..+.+||..+..- ..+...
T Consensus 147 ~~l~~~~~dg~i~iwd~~~~~~~~~~--~----~~~~~v~~~~~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~-- 216 (401)
T 4aez_A 147 SFLSVGLGNGLVDIYDVESQTKLRTM--A----GHQARVGCLSWNRHVLSSGSRS--GAIHHHDVRIANHQIGTLQGH-- 216 (401)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEE--C----CCSSCEEEEEEETTEEEEEETT--SEEEEEETTSSSCEEEEEECC--
T ss_pred CEEEEECCCCeEEEEECcCCeEEEEe--c----CCCCceEEEEECCCEEEEEcCC--CCEEEEecccCcceeeEEcCC--
Confidence 34444444567888888766432211 1 1111111233455566666543 4688899874321 111111
Q ss_pred CccceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCcEEE-CCCCCCCCcceeEEEE--CCEEEEEeccCCCCCCCc
Q 012755 239 PRCLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGTWET-LPDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLT 314 (457)
Q Consensus 239 ~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~-~~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~ 314 (457)
...-.+++.. ++..++.|+.+ ..+.+||..+..-.. +.... ..-.+++.. +..+++.||.. ...
T Consensus 217 ~~~v~~~~~~~~~~~l~s~~~d------~~v~iwd~~~~~~~~~~~~~~--~~v~~~~~~p~~~~ll~~~~gs----~d~ 284 (401)
T 4aez_A 217 SSEVCGLAWRSDGLQLASGGND------NVVQIWDARSSIPKFTKTNHN--AAVKAVAWCPWQSNLLATGGGT----MDK 284 (401)
T ss_dssp SSCEEEEEECTTSSEEEEEETT------SCEEEEETTCSSEEEEECCCS--SCCCEEEECTTSTTEEEEECCT----TTC
T ss_pred CCCeeEEEEcCCCCEEEEEeCC------CeEEEccCCCCCccEEecCCc--ceEEEEEECCCCCCEEEEecCC----CCC
Confidence 1111122222 56677777643 468889998765322 11111 111222222 34566666421 234
Q ss_pred eEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEE--ecCCCeEEEEECCCCcEEEeccCCCccCC
Q 012755 315 CGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSA--DQATNVVKKYNKTNNSWTVVKRLPVRANS 390 (457)
Q Consensus 315 ~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~--gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~ 390 (457)
.+..||..+++-...-... .....+.. ++..++. |...+.+..||..+.....+..++.....
T Consensus 285 ~i~i~d~~~~~~~~~~~~~-------------~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~ 351 (401)
T 4aez_A 285 QIHFWNAATGARVNTVDAG-------------SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTR 351 (401)
T ss_dssp EEEEEETTTCCEEEEEECS-------------SCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSC
T ss_pred EEEEEECCCCCEEEEEeCC-------------CcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCC
Confidence 6888999877543322111 11122222 4554444 44678999999988877766544332211
Q ss_pred CCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 391 FNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 391 ~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
-..+ ...-++++++.||.++ .+.+|+..++
T Consensus 352 --v~~~-~~s~dg~~l~s~~~dg------~i~iw~~~~~ 381 (401)
T 4aez_A 352 --VLYS-ALSPDGRILSTAASDE------NLKFWRVYDG 381 (401)
T ss_dssp --CCEE-EECTTSSEEEEECTTS------EEEEEECCC-
T ss_pred --EEEE-EECCCCCEEEEEeCCC------cEEEEECCCC
Confidence 1111 2233677778787764 5888999874
No 92
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.41 E-value=0.33 Score=47.00 Aligned_cols=186 Identities=11% Similarity=0.047 Sum_probs=95.8
Q ss_pred cEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCc
Q 012755 161 HWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPR 240 (457)
Q Consensus 161 ~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r 240 (457)
..++..+....+..||..+.+............-. ......++.+++.|+.. ..+.+||..+++-...-. ...
T Consensus 104 ~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~---~v~~s~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~--~~~ 176 (401)
T 4aez_A 104 LNVVAVALERNVYVWNADSGSVSALAETDESTYVA---SVKWSHDGSFLSVGLGN--GLVDIYDVESQTKLRTMA--GHQ 176 (401)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEE---EEEECTTSSEEEEEETT--SCEEEEETTTCCEEEEEC--CCS
T ss_pred CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEE---EEEECCCCCEEEEECCC--CeEEEEECcCCeEEEEec--CCC
Confidence 34555566777888999887765443332111000 01122255666666543 368889988776433211 111
Q ss_pred cceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCc--EEECCCCCCCCcceeEEEE--CCEEEEEeccCCCCCCCceE
Q 012755 241 CLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGT--WETLPDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCG 316 (457)
Q Consensus 241 ~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~ 316 (457)
........++.+++.|+.+ ..+.++|..+.. -..+.. .......+.+ ++.+++.|+.+ ..+
T Consensus 177 ~~v~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~d------~~v 241 (401)
T 4aez_A 177 ARVGCLSWNRHVLSSGSRS------GAIHHHDVRIANHQIGTLQG---HSSEVCGLAWRSDGLQLASGGND------NVV 241 (401)
T ss_dssp SCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEEC---CSSCEEEEEECTTSSEEEEEETT------SCE
T ss_pred CceEEEEECCCEEEEEcCC------CCEEEEecccCcceeeEEcC---CCCCeeEEEEcCCCCEEEEEeCC------CeE
Confidence 1122233356667777643 468888987432 111111 1111122222 56666776643 357
Q ss_pred EEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEec--CCCeEEEEECCCCcEE
Q 012755 317 EEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQ--ATNVVKKYNKTNNSWT 379 (457)
Q Consensus 317 ~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg--~~~~v~~Yd~~~~~W~ 379 (457)
.+||..+.+-...-... ......++.. +..+++.|+ ..+.+..||..+.+-.
T Consensus 242 ~iwd~~~~~~~~~~~~~-----------~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 242 QIWDARSSIPKFTKTNH-----------NAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARV 297 (401)
T ss_dssp EEEETTCSSEEEEECCC-----------SSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEE
T ss_pred EEccCCCCCccEEecCC-----------cceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEE
Confidence 88999875432211111 1111223333 346777764 5788999999877543
No 93
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.37 E-value=0.27 Score=46.29 Aligned_cols=218 Identities=11% Similarity=0.109 Sum_probs=107.9
Q ss_pred EEEEecCccEEEEeCCCCcEEe-CCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCcc
Q 012755 163 VYLACILMPWEAFDPLRQRWMR-LPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRC 241 (457)
Q Consensus 163 l~~~~~~~~~~~ydp~~~~W~~-l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~ 241 (457)
+...+....+..+|..+.+-.. +..-+.. .. ......++..++.|+. ...+.+||..+++-...-... ...
T Consensus 95 l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~---~~--~~~~spdg~~l~~g~~--dg~v~i~~~~~~~~~~~~~~~-~~~ 166 (321)
T 3ow8_A 95 AASSSLDAHIRLWDLENGKQIKSIDAGPVD---AW--TLAFSPDSQYLATGTH--VGKVNIFGVESGKKEYSLDTR-GKF 166 (321)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCTTC---CC--CEEECTTSSEEEEECT--TSEEEEEETTTCSEEEEEECS-SSC
T ss_pred EEEEeCCCcEEEEECCCCCEEEEEeCCCcc---EE--EEEECCCCCEEEEEcC--CCcEEEEEcCCCceeEEecCC-Cce
Confidence 3333445667788887664322 1111110 00 0122335556666643 346788888766432211001 111
Q ss_pred ceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEE-CCCCCCCCcceeEEE-ECCEEEEEeccCCCCCCCceEEE
Q 012755 242 LFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWET-LPDMNLPRKLCSGFF-MDGKFYIIGGMSSPTDPLTCGEE 318 (457)
Q Consensus 242 ~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~-~~~~p~~r~~~~~~~-~~g~iyv~GG~~~~~~~~~~~~~ 318 (457)
-.+++. -+++.++.|+.+ ..+.+||..+++-.. +..-..+ -.+++. -++++.+.|+.+ ..+.+
T Consensus 167 v~~~~~spdg~~lasg~~d------g~i~iwd~~~~~~~~~~~~h~~~--v~~l~~spd~~~l~s~s~d------g~i~i 232 (321)
T 3ow8_A 167 ILSIAYSPDGKYLASGAID------GIINIFDIATGKLLHTLEGHAMP--IRSLTFSPDSQLLVTASDD------GYIKI 232 (321)
T ss_dssp EEEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEEECCCSSC--CCEEEECTTSCEEEEECTT------SCEEE
T ss_pred EEEEEECCCCCEEEEEcCC------CeEEEEECCCCcEEEEEcccCCc--eeEEEEcCCCCEEEEEcCC------CeEEE
Confidence 112222 256667777644 358889998876432 2211111 112222 266777776643 35788
Q ss_pred EECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceE
Q 012755 319 YNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGL 396 (457)
Q Consensus 319 yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~ 396 (457)
||..+...... +.. .......+.+ ++..++.++..+.|..||..+.+-.. .+.... ..-.
T Consensus 233 wd~~~~~~~~~--~~~----------h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~--~~~~h~----~~v~ 294 (321)
T 3ow8_A 233 YDVQHANLAGT--LSG----------HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVH--TFFDHQ----DQVW 294 (321)
T ss_dssp EETTTCCEEEE--ECC----------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE--EECCCS----SCEE
T ss_pred EECCCcceeEE--EcC----------CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEE--EEcCCC----CcEE
Confidence 99887654322 111 1111122223 67777778788899999998765322 222111 1111
Q ss_pred EEE-EeCCEEEEEcCcCCCCCceEEEEEeeC
Q 012755 397 AFK-ACGNSLLVIGGHRELQGEIIVLHSWDP 426 (457)
Q Consensus 397 ~~~-~~~g~lyv~GG~~~~~~~~~~v~~y~~ 426 (457)
++. .-+++.++.||.++ .+.+||.
T Consensus 295 ~v~~s~~g~~l~s~~~d~------~i~vwd~ 319 (321)
T 3ow8_A 295 GVKYNGNGSKIVSVGDDQ------EIHIYDC 319 (321)
T ss_dssp EEEECTTSSEEEEEETTC------CEEEEEC
T ss_pred EEEECCCCCEEEEEeCCC------eEEEEeC
Confidence 222 22566677777664 3677774
No 94
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.33 E-value=0.16 Score=47.40 Aligned_cols=230 Identities=8% Similarity=0.021 Sum_probs=113.3
Q ss_pred ccEEEEEec-CccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCC-EEEEEceecCCcEEEEEECCCCcE--EeCCC
Q 012755 160 EHWVYLACI-LMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGT-QLLVFGRELSGFAIWMYSLIANCW--SKCPQ 235 (457)
Q Consensus 160 ~~~l~~~~~-~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~-~lyv~GG~~~~~~v~~yd~~t~~W--~~l~~ 235 (457)
...+|+... ...+..+|+.+.+....-..+.... . ..+..++ .+|+.+. ....++++|+.+++- ..+..
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~--~---~~~s~dg~~l~~~~~--~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV--D---TAITSDCSNVVVTSD--FCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE--E---EEECSSSCEEEEEES--TTCEEEEEECSSSSCEEEEEEE
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc--e---EEEcCCCCEEEEEeC--CCCeEEEEECCCCceeEEeccc
Confidence 456666543 5678899998887754332221111 1 1222344 5776654 234899999988874 22222
Q ss_pred CCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE-CC-EEEEEeccCCCCCCC
Q 012755 236 MNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM-DG-KFYIIGGMSSPTDPL 313 (457)
Q Consensus 236 lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g-~iyv~GG~~~~~~~~ 313 (457)
-..++...+...-+..+| .+...+ ....+.++|..+++-...-+. ....+.++.. +| .+|+.+...
T Consensus 82 ~~~~~~~~~~s~dg~~l~-~~~~~~---~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~------ 149 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAV-TVTGLN---HPFNMQSYSFLKNKFISTIPI--PYDAVGIAISPNGNGLILIDRSS------ 149 (331)
T ss_dssp CSSCCCCEEECTTSSEEE-ECCCSS---SSCEEEEEETTTTEEEEEEEC--CTTEEEEEECTTSSCEEEEEETT------
T ss_pred CCCCccceEECCCCCEEE-EecCCC---CcccEEEEECCCCCeEEEEEC--CCCccceEECCCCCEEEEEecCC------
Confidence 222221112222244566 322111 123799999998875443211 1112333332 45 477765421
Q ss_pred ce-EEEEECCCCc-eEEc--CCCCCCCCCCCCCCCCCCCCEEEEE--CC-EEEEEecCCCeEEEEECCCCcE-EEeccCC
Q 012755 314 TC-GEEYNLETRT-WKRI--ENMYPSNVGTQSNPAMSSPPLVAVV--NN-QLYSADQATNVVKKYNKTNNSW-TVVKRLP 385 (457)
Q Consensus 314 ~~-~~~yd~~t~~-W~~~--~~~~~~~~~~~~~~~~r~~~~~~~~--~g-~ly~~gg~~~~v~~Yd~~~~~W-~~v~~~p 385 (457)
.. +.+|+...+. -... ...+. . ..+..+.+ +| .+|+.+...+.+.+||+++.+. +.+..++
T Consensus 150 ~~~i~~~~~~~~g~~~~~~~~~~~~----------~-~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~ 218 (331)
T 3u4y_A 150 ANTVRRFKIDADGVLFDTGQEFISG----------G-TRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG 218 (331)
T ss_dssp TTEEEEEEECTTCCEEEEEEEEECS----------S-SSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE
T ss_pred CceEEEEEECCCCcEeecCCccccC----------C-CCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc
Confidence 23 6667655432 1111 00111 1 11222223 55 4888876778999999987764 1122222
Q ss_pred CccCCCCcceEEEEEeCCE-EEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 386 VRANSFNGWGLAFKACGNS-LLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 386 ~~~~~~~~~~~~~~~~~g~-lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
.... -.++++ .-+|+ ||+..... ..+.+||++++
T Consensus 219 ~~~~---~~~~~~-spdg~~l~v~~~~~------~~i~~~d~~~~ 253 (331)
T 3u4y_A 219 TNNL---PGTIVV-SRDGSTVYVLTEST------VDVFNFNQLSG 253 (331)
T ss_dssp CSSC---CCCEEE-CTTSSEEEEECSSE------EEEEEEETTTT
T ss_pred CCCC---CceEEE-CCCCCEEEEEEcCC------CEEEEEECCCC
Confidence 2211 112222 23454 77765422 35888998874
No 95
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.27 E-value=0.3 Score=45.50 Aligned_cols=193 Identities=11% Similarity=0.060 Sum_probs=89.4
Q ss_pred cEEEEEe-cCccEEEEeCC-CCcEEeCCCCCCCccccCCCeeeEEeCC-EEEEEceecCCcEEEEEECC--CCcEEeCCC
Q 012755 161 HWVYLAC-ILMPWEAFDPL-RQRWMRLPRMQCDECFTSADKESLAVGT-QLLVFGRELSGFAIWMYSLI--ANCWSKCPQ 235 (457)
Q Consensus 161 ~~l~~~~-~~~~~~~ydp~-~~~W~~l~~~p~~~~~~~~~~~~~~~~~-~lyv~GG~~~~~~v~~yd~~--t~~W~~l~~ 235 (457)
..+|+.. ....+..||.. +.+...+...+....... .....++ .||+.+.. ...+.+|+.. +++++.+..
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~---~~~spdg~~l~~~~~~--~~~v~~~~~~~~~~~~~~~~~ 79 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQP---MVVSPDKRYLYVGVRP--EFRVLAYRIAPDDGALTFAAE 79 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCC---EEECTTSSEEEEEETT--TTEEEEEEECTTTCCEEEEEE
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCce---EEECCCCCEEEEeecC--CCeEEEEEecCCCCceeeccc
Confidence 4566653 35667778764 344433322221111111 1122344 46654432 2467777765 777765543
Q ss_pred CCCCccceeEEe-eCC-EEEEEeeecCCCCccceEEEEeCCCCc-EEECCCCCCCCcceeEEEE-CC-EEEEEeccCCCC
Q 012755 236 MNLPRCLFGSSS-LGE-VAIVAGGTDKNGCILKSAELYNSELGT-WETLPDMNLPRKLCSGFFM-DG-KFYIIGGMSSPT 310 (457)
Q Consensus 236 lp~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~v~~yd~~t~~-W~~~~~~p~~r~~~~~~~~-~g-~iyv~GG~~~~~ 310 (457)
++.+.....++. -++ .+|+.+. . ...+.+||...+. .+.+...+.......++.. +| .+|+.+..
T Consensus 80 ~~~~~~~~~~~~s~dg~~l~~~~~-~-----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---- 149 (343)
T 1ri6_A 80 SALPGSLTHISTDHQGQFVFVGSY-N-----AGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALK---- 149 (343)
T ss_dssp EECSSCCSEEEECTTSSEEEEEET-T-----TTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGG----
T ss_pred cccCCCCcEEEEcCCCCEEEEEec-C-----CCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCC----
Confidence 322221122222 234 4665543 1 2457778773222 2222111111111222222 34 57766522
Q ss_pred CCCceEEEEECCC-CceEEcC--CCCCCCCCCCCCCCCCCCCEEEEE--CC-EEEEEecCCCeEEEEECC--CCcEE
Q 012755 311 DPLTCGEEYNLET-RTWKRIE--NMYPSNVGTQSNPAMSSPPLVAVV--NN-QLYSADQATNVVKKYNKT--NNSWT 379 (457)
Q Consensus 311 ~~~~~~~~yd~~t-~~W~~~~--~~~~~~~~~~~~~~~r~~~~~~~~--~g-~ly~~gg~~~~v~~Yd~~--~~~W~ 379 (457)
...+.+||..+ ++...+. ..... ....+..+.+ ++ .+|+.+...+.+..||.. +.+++
T Consensus 150 --~~~v~~~d~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~ 215 (343)
T 1ri6_A 150 --QDRICLFTVSDDGHLVAQDPAEVTTV---------EGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIE 215 (343)
T ss_dssp --GTEEEEEEECTTSCEEEEEEEEEECS---------TTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCE
T ss_pred --CCEEEEEEecCCCceeeecccccccC---------CCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEE
Confidence 23588899887 6665433 11110 0111222233 44 477777677889999985 35544
No 96
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.25 E-value=0.073 Score=56.88 Aligned_cols=191 Identities=9% Similarity=0.072 Sum_probs=102.4
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCcc-ceeEEe-eC--CEEEEEeeecCCCCccceEEEEeCCCCcEEE
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRC-LFGSSS-LG--EVAIVAGGTDKNGCILKSAELYNSELGTWET 280 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~-~~~~~~-~~--~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~ 280 (457)
++..++.|+.+ ..+.+||..++++..+..+..... -.+++. .+ +..++.|+.+ ..+.++|..++.|..
T Consensus 20 dg~~latg~~d--g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D------g~I~vwd~~~~~~~~ 91 (753)
T 3jro_A 20 YGKRLATCSSD--KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKEENGRWSQ 91 (753)
T ss_dssp SSCCEEEEETT--TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT------SCEEEEEEETTEEEE
T ss_pred CCCeEEEEECC--CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC------CeEEEEECCCCcccc
Confidence 34455555443 367788877666665543332222 122222 23 6677777754 458889999988876
Q ss_pred CCCCCCCCcceeEEEE--C--CEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--
Q 012755 281 LPDMNLPRKLCSGFFM--D--GKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV-- 354 (457)
Q Consensus 281 ~~~~p~~r~~~~~~~~--~--g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~-- 354 (457)
+............+.+ + +.+++.|+.+ ..+.+||..+..-........ .......+..
T Consensus 92 ~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d------g~I~vwdl~~~~~~~~~~~~~----------~~~~v~~l~~~p 155 (753)
T 3jro_A 92 IAVHAVHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDA----------HAIGVNSASWAP 155 (753)
T ss_dssp EEEECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCSSSCCCCEEEEC----------CSSCEEEEEECC
T ss_pred cccccCCCCCeEEEEECCCCCCCEEEEEeCC------CcEEEEEeecCCCcceeEeec----------CCCceEEEEecC
Confidence 6544333332333333 2 5666776643 367888887762211111101 0111111111
Q ss_pred -------------CCEEEEEecCCCeEEEEECCCC--cEEEeccCCCccCCCCcceEEEEE-eC---CEEEEEcCcCCCC
Q 012755 355 -------------NNQLYSADQATNVVKKYNKTNN--SWTVVKRLPVRANSFNGWGLAFKA-CG---NSLLVIGGHRELQ 415 (457)
Q Consensus 355 -------------~g~ly~~gg~~~~v~~Yd~~~~--~W~~v~~~p~~~~~~~~~~~~~~~-~~---g~lyv~GG~~~~~ 415 (457)
++.+++.|+..+.|..||..+. .+..+..+..... .-..+.. -+ +.+++.||.++
T Consensus 156 ~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~----~V~~l~~sp~~~~~~~l~s~s~Dg-- 229 (753)
T 3jro_A 156 ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD----WVRDVAWSPTVLLRSYLASVSQDR-- 229 (753)
T ss_dssp CC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS----CEEEEEECCCCSSSEEEEEEESSS--
T ss_pred cccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCC----cEEEEEeccCCCCCCEEEEEecCC--
Confidence 3677778888888999988654 4555443332221 1112222 23 78888888764
Q ss_pred CceEEEEEeeCCCC
Q 012755 416 GEIIVLHSWDPTDG 429 (457)
Q Consensus 416 ~~~~~v~~y~~~~~ 429 (457)
.+.+||..+.
T Consensus 230 ----~I~iwd~~~~ 239 (753)
T 3jro_A 230 ----TCIIWTQDNE 239 (753)
T ss_dssp ----CEEEEEESSS
T ss_pred ----EEEEecCCCC
Confidence 4778888763
No 97
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.23 E-value=0.57 Score=43.38 Aligned_cols=225 Identities=12% Similarity=0.081 Sum_probs=107.2
Q ss_pred ccEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCcEEe-CCCCCC
Q 012755 160 EHWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANCWSK-CPQMNL 238 (457)
Q Consensus 160 ~~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~-l~~lp~ 238 (457)
+..+...+....+..+|..+..-...-...... ........++.+++.|+. ...+.+||..+++-.. +.. .
T Consensus 25 ~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~s~s~--d~~i~vwd~~~~~~~~~~~~--h 96 (304)
T 2ynn_A 25 EPWVLTTLYSGRVELWNYETQVEVRSIQVTETP----VRAGKFIARKNWIIVGSD--DFRIRVFNYNTGEKVVDFEA--H 96 (304)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSSC----EEEEEEEGGGTEEEEEET--TSEEEEEETTTCCEEEEEEC--C
T ss_pred CCEEEEEcCCCcEEEEECCCCceeEEeeccCCc----EEEEEEeCCCCEEEEECC--CCEEEEEECCCCcEEEEEeC--C
Confidence 345555555667788888766432110000000 001122335555666654 3468889988765322 111 1
Q ss_pred CccceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE---CCEEEEEeccCCCCCCCc
Q 012755 239 PRCLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM---DGKFYIIGGMSSPTDPLT 314 (457)
Q Consensus 239 ~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~---~g~iyv~GG~~~~~~~~~ 314 (457)
...-.+++.. ++.+++.|+.+ ..+.++|..++.= ....+.........+.+ ++.+++.|+.+ .
T Consensus 97 ~~~v~~~~~~~~~~~l~sgs~D------~~v~lWd~~~~~~-~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D------~ 163 (304)
T 2ynn_A 97 PDYIRSIAVHPTKPYVLSGSDD------LTVKLWNWENNWA-LEQTFEGHEHFVMCVAFNPKDPSTFASGCLD------R 163 (304)
T ss_dssp SSCEEEEEECSSSSEEEEEETT------SCEEEEEGGGTTE-EEEEECCCCSCEEEEEECTTCTTEEEEEETT------S
T ss_pred CCcEEEEEEcCCCCEEEEECCC------CeEEEEECCCCcc-hhhhhcccCCcEEEEEECCCCCCEEEEEeCC------C
Confidence 1111222222 45566666643 3577788766521 11011111111122222 34566666643 3
Q ss_pred eEEEEECCCCceEE-cCCCCCCCCCCCCCCCCCCCCEEEEE----CCEEEEEecCCCeEEEEECCCCcEEEeccCCCccC
Q 012755 315 CGEEYNLETRTWKR-IENMYPSNVGTQSNPAMSSPPLVAVV----NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRAN 389 (457)
Q Consensus 315 ~~~~yd~~t~~W~~-~~~~~~~~~~~~~~~~~r~~~~~~~~----~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~ 389 (457)
.+..||..+..-.. +.. . .......+.+ ++.+++.|+..+.|..||..+..- +..+....
T Consensus 164 ~v~iwd~~~~~~~~~~~~--~----------~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~--~~~~~~h~- 228 (304)
T 2ynn_A 164 TVKVWSLGQSTPNFTLTT--G----------QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC--VATLEGHM- 228 (304)
T ss_dssp EEEEEETTCSSCSEEEEC--C----------CTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEE--EEEEECCS-
T ss_pred eEEEEECCCCCccceecc--C----------CcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCcc--ceeeCCCC-
Confidence 57888876543110 100 0 1111122222 456777777888999999987642 22222111
Q ss_pred CCCcceEEE-EEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 390 SFNGWGLAF-KACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 390 ~~~~~~~~~-~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
..-..+ ..-++.+++.|+.++ .+.+||..+.
T Consensus 229 ---~~v~~~~~~p~~~~l~s~s~Dg------~i~iWd~~~~ 260 (304)
T 2ynn_A 229 ---SNVSFAVFHPTLPIIISGSEDG------TLKIWNSSTY 260 (304)
T ss_dssp ---SCEEEEEECSSSSEEEEEETTS------CEEEEETTTC
T ss_pred ---CCEEEEEECCCCCEEEEEcCCC------eEEEEECCCC
Confidence 111112 223566777787764 4788998763
No 98
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.22 E-value=0.27 Score=44.42 Aligned_cols=224 Identities=11% Similarity=-0.039 Sum_probs=111.7
Q ss_pred ccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCC-CcEEeCCCCCCCccceeE-Ee
Q 012755 170 MPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIA-NCWSKCPQMNLPRCLFGS-SS 247 (457)
Q Consensus 170 ~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t-~~W~~l~~lp~~r~~~~~-~~ 247 (457)
..++.+|..+.+...+...+.. ........++..+++++ ...++++|..+ ++...+...........+ ..
T Consensus 22 ~~i~~~d~~~~~~~~~~~~~~~-----v~~~~~spdg~~l~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQTPEL-----FEAPNWSPDGKYLLLNS---EGLLYRLSLAGDPSPEKVDTGFATICNNDHGIS 93 (297)
T ss_dssp EEEEEEETTTTEEEEEEEESSC-----CEEEEECTTSSEEEEEE---TTEEEEEESSSCCSCEECCCTTCCCBCSCCEEC
T ss_pred eeEEEEeCCCCceeeeccCCcc-----eEeeEECCCCCEEEEEc---CCeEEEEeCCCCCCceEeccccccccccceEEC
Confidence 4566778877765544321110 00112233555555554 34799999998 877766533321111122 22
Q ss_pred eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE-CCE-EEEEeccCCCCCCCceEEEEECCCCc
Q 012755 248 LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM-DGK-FYIIGGMSSPTDPLTCGEEYNLETRT 325 (457)
Q Consensus 248 ~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g~-iyv~GG~~~~~~~~~~~~~yd~~t~~ 325 (457)
-+++.+++++...+ ....++.+|..++.-..+..... ....+.. +++ |++.++.++ ...++.+|..+..
T Consensus 94 pdg~~l~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~----~~~l~~~~~~~~~ 164 (297)
T 2ojh_A 94 PDGALYAISDKVEF--GKSAIYLLPSTGGTPRLMTKNLP---SYWHGWSPDGKSFTYCGIRDQ----VFDIYSMDIDSGV 164 (297)
T ss_dssp TTSSEEEEEECTTT--SSCEEEEEETTCCCCEECCSSSS---EEEEEECTTSSEEEEEEEETT----EEEEEEEETTTCC
T ss_pred CCCCEEEEEEeCCC--CcceEEEEECCCCceEEeecCCC---ccceEECCCCCEEEEEECCCC----ceEEEEEECCCCc
Confidence 35555555553322 24688999988877665543221 1222222 444 544443322 1356677787777
Q ss_pred eEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCE-EEEEec--CCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEE
Q 012755 326 WKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQ-LYSADQ--ATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKA 400 (457)
Q Consensus 326 W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~-ly~~gg--~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~ 400 (457)
...+..... ....+.. +|+ |++.+. ....++.++........+....... ... ...
T Consensus 165 ~~~~~~~~~-------------~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-----~~~-~~s 225 (297)
T 2ojh_A 165 ETRLTHGEG-------------RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGD-----WFP-HPS 225 (297)
T ss_dssp EEECCCSSS-------------CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEE-----EEE-EEC
T ss_pred ceEcccCCC-------------ccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCccc-----CCe-EEC
Confidence 766543221 1112222 554 444432 2456788887777776654322110 011 112
Q ss_pred eCCEEEEEcCcCCCCC-----ceEEEEEeeCCCC
Q 012755 401 CGNSLLVIGGHRELQG-----EIIVLHSWDPTDG 429 (457)
Q Consensus 401 ~~g~lyv~GG~~~~~~-----~~~~v~~y~~~~~ 429 (457)
-+++.+++++..+... ....+++||.++.
T Consensus 226 ~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 259 (297)
T 2ojh_A 226 PSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGG 259 (297)
T ss_dssp TTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSC
T ss_pred CCCCEEEEEEcCCCCCcccccCceEEEEEecCCC
Confidence 3555444444332110 2357999998874
No 99
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.21 E-value=0.5 Score=45.61 Aligned_cols=189 Identities=12% Similarity=0.061 Sum_probs=95.4
Q ss_pred eCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCcEEECC
Q 012755 204 VGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGTWETLP 282 (457)
Q Consensus 204 ~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~ 282 (457)
.++.+++.|+.. ..+.+||..+++-...-.- ....-.+++.. ++.+++.|+.+ ..+.+||..+.+-..
T Consensus 107 ~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~d------~~i~iwd~~~~~~~~-- 175 (420)
T 3vl1_A 107 LQMRRFILGTTE--GDIKVLDSNFNLQREIDQA-HVSEITKLKFFPSGEALISSSQD------MQLKIWSVKDGSNPR-- 175 (420)
T ss_dssp SSSCEEEEEETT--SCEEEECTTSCEEEEETTS-SSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTCCCCE--
T ss_pred cCCCEEEEEECC--CCEEEEeCCCcceeeeccc-ccCccEEEEECCCCCEEEEEeCC------CeEEEEeCCCCcCce--
Confidence 366677777543 3588899887765443211 11111222222 56666666643 468889987664111
Q ss_pred CCCCCCc-ceeEEEE-CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEE--------
Q 012755 283 DMNLPRK-LCSGFFM-DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVA-------- 352 (457)
Q Consensus 283 ~~p~~r~-~~~~~~~-~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~-------- 352 (457)
.+..... -.+++.. +++..+.|+.+ ..+..||+.+++-...-..... .......+
T Consensus 176 ~~~~h~~~v~~~~~~~~~~~l~s~~~d------~~v~iwd~~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~ 240 (420)
T 3vl1_A 176 TLIGHRATVTDIAIIDRGRNVLSASLD------GTIRLWECGTGTTIHTFNRKEN---------PHDGVNSIALFVGTDR 240 (420)
T ss_dssp EEECCSSCEEEEEEETTTTEEEEEETT------SCEEEEETTTTEEEEEECBTTB---------TTCCEEEEEEEECCCS
T ss_pred EEcCCCCcEEEEEEcCCCCEEEEEcCC------CcEEEeECCCCceeEEeecCCC---------CCCCccEEEEecCCcc
Confidence 1111111 1222222 56666666543 3477889887653322111100 00000011
Q ss_pred ---------------EECCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEE-eCCE-EEEEcCcCCCC
Q 012755 353 ---------------VVNNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKA-CGNS-LLVIGGHRELQ 415 (457)
Q Consensus 353 ---------------~~~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~-~~g~-lyv~GG~~~~~ 415 (457)
.-++++++.|+..+.+..||..+..-... .+.... ..-..+.. -++. +++.|+.++
T Consensus 241 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~---~~v~~~~~~~~~~~~l~~g~~dg-- 313 (420)
T 3vl1_A 241 QLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQ--LPSKFT---CSCNSLTVDGNNANYIYAGYENG-- 313 (420)
T ss_dssp SCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEE--ECCTTS---SCEEEEEECSSCTTEEEEEETTS--
T ss_pred eeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEE--cccccC---CCceeEEEeCCCCCEEEEEeCCC--
Confidence 12677888888888999999987653222 111110 11112222 2444 777777653
Q ss_pred CceEEEEEeeCCCC
Q 012755 416 GEIIVLHSWDPTDG 429 (457)
Q Consensus 416 ~~~~~v~~y~~~~~ 429 (457)
.+.+||..+.
T Consensus 314 ----~i~vwd~~~~ 323 (420)
T 3vl1_A 314 ----MLAQWDLRSP 323 (420)
T ss_dssp ----EEEEEETTCT
T ss_pred ----eEEEEEcCCC
Confidence 5888988764
No 100
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.20 E-value=1.5 Score=45.92 Aligned_cols=209 Identities=11% Similarity=0.072 Sum_probs=111.8
Q ss_pred cccEEEEEecCccEEEEeCCCC--cEEeCCCCCCCccc----cCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCc--E
Q 012755 159 VEHWVYLACILMPWEAFDPLRQ--RWMRLPRMQCDECF----TSADKESLAVGTQLLVFGRELSGFAIWMYSLIANC--W 230 (457)
Q Consensus 159 ~~~~l~~~~~~~~~~~ydp~~~--~W~~l~~~p~~~~~----~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~--W 230 (457)
.++.+|+......++++|..+. .|..-...+..... .......+..++.||+... ...++.+|..|++ |
T Consensus 65 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg~l~alD~~tG~~~W 141 (668)
T 1kv9_A 65 HDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL---DGRLIALDAKTGKAIW 141 (668)
T ss_dssp ETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT---TSEEEEEETTTCCEEE
T ss_pred ECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC---CCEEEEEECCCCCEee
Confidence 3778888877778999998766 58764433211100 0011224556888887542 3478999998875 8
Q ss_pred EeCCCCCC--CccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCc--EEEC--CCCCCCC----------------
Q 012755 231 SKCPQMNL--PRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGT--WETL--PDMNLPR---------------- 288 (457)
Q Consensus 231 ~~l~~lp~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~--~~~p~~r---------------- 288 (457)
+.-..-+. .....+.++.++.+|+..+.... .....+..||.+|++ |+.- +.-|...
T Consensus 142 ~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~-~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 220 (668)
T 1kv9_A 142 SQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEY-GVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGD 220 (668)
T ss_dssp EEECSCTTSSCBCCSCCEEETTEEEECCBCTTT-CCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSS
T ss_pred eeccCCCCCcceecCCCEEECCEEEEeCCCCCc-CCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCcc
Confidence 76321111 11112334568888874332111 134689999999887 8763 2111100
Q ss_pred ----------cceeEEE--ECCEEEEEeccC------------CCCCCCceEEEEECCCCc--eEEcCCCCCCCCCCCCC
Q 012755 289 ----------KLCSGFF--MDGKFYIIGGMS------------SPTDPLTCGEEYNLETRT--WKRIENMYPSNVGTQSN 342 (457)
Q Consensus 289 ----------~~~~~~~--~~g~iyv~GG~~------------~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~~~~~~~ 342 (457)
.....++ .++.+|+-.+.. +.......+.++|++|++ |+.-..... ..
T Consensus 221 ~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~------~w 294 (668)
T 1kv9_A 221 QYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGD------SW 294 (668)
T ss_dssp CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTC------CS
T ss_pred ceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCc------cc
Confidence 0011222 257788764422 111234579999999874 875432111 00
Q ss_pred CCCCCCC-EE--EEECCE---EEEEecCCCeEEEEECCCCc
Q 012755 343 PAMSSPP-LV--AVVNNQ---LYSADQATNVVKKYNKTNNS 377 (457)
Q Consensus 343 ~~~r~~~-~~--~~~~g~---ly~~gg~~~~v~~Yd~~~~~ 377 (457)
......+ .+ ...+|+ +++++...+.++.+|.++++
T Consensus 295 d~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 335 (668)
T 1kv9_A 295 DFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGK 335 (668)
T ss_dssp CCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred cccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCC
Confidence 0000111 11 224665 45555566778888877764
No 101
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.20 E-value=0.39 Score=45.37 Aligned_cols=176 Identities=10% Similarity=0.033 Sum_probs=88.7
Q ss_pred eCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECC
Q 012755 204 VGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLP 282 (457)
Q Consensus 204 ~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~ 282 (457)
.++.+ +.|+. ...+.+||..+++-...-.-. ...-.+++. -++.+++.|+.+ ..+.++|..++.-...
T Consensus 153 ~~~~l-~s~s~--d~~i~~wd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~sg~~d------~~v~~wd~~~~~~~~~- 221 (340)
T 1got_B 153 DDNQI-VTSSG--DTTCALWDIETGQQTTTFTGH-TGDVMSLSLAPDTRLFVSGACD------ASAKLWDVREGMCRQT- 221 (340)
T ss_dssp ETTEE-EEEET--TSCEEEEETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETT------SCEEEEETTTCSEEEE-
T ss_pred CCCcE-EEEEC--CCcEEEEECCCCcEEEEEcCC-CCceEEEEECCCCCEEEEEeCC------CcEEEEECCCCeeEEE-
Confidence 35554 34433 245888999887643321101 111122222 256677777754 4578889887754321
Q ss_pred CCCCCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEE
Q 012755 283 DMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQL 358 (457)
Q Consensus 283 ~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~l 358 (457)
+.........+.+ ++..++.|+.+ ..+..||..+.+-...-.... .......+.+ ++++
T Consensus 222 -~~~h~~~v~~v~~~p~~~~l~s~s~d------~~v~iwd~~~~~~~~~~~~~~----------~~~~v~~~~~s~~g~~ 284 (340)
T 1got_B 222 -FTGHESDINAICFFPNGNAFATGSDD------ATCRLFDLRADQELMTYSHDN----------IICGITSVSFSKSGRL 284 (340)
T ss_dssp -ECCCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEEECCTT----------CCSCEEEEEECTTSSE
T ss_pred -EcCCcCCEEEEEEcCCCCEEEEEcCC------CcEEEEECCCCcEEEEEccCC----------cccceEEEEECCCCCE
Confidence 1111111112222 56677776643 357889988765322111111 1112222223 6788
Q ss_pred EEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEE-EeCCEEEEEcCcCC
Q 012755 359 YSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFK-ACGNSLLVIGGHRE 413 (457)
Q Consensus 359 y~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~-~~~g~lyv~GG~~~ 413 (457)
++.|+..+.+..||..+.. .+..+.... ..-..+. .-+++.++.|+.++
T Consensus 285 l~~g~~d~~i~vwd~~~~~--~~~~~~~h~----~~v~~~~~s~dg~~l~s~s~D~ 334 (340)
T 1got_B 285 LLAGYDDFNCNVWDALKAD--RAGVLAGHD----NRVSCLGVTDDGMAVATGSWDS 334 (340)
T ss_dssp EEEEETTSEEEEEETTTCC--EEEEEECCS----SCEEEEEECTTSSCEEEEETTS
T ss_pred EEEECCCCeEEEEEcccCc--EeeEeecCC----CcEEEEEEcCCCCEEEEEcCCc
Confidence 8888888899999987653 222222111 1111222 23667777787764
No 102
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.18 E-value=0.35 Score=44.69 Aligned_cols=198 Identities=8% Similarity=0.075 Sum_probs=94.4
Q ss_pred CEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCcc-ceeEEee-C--CEEEEEeeecCCCCccceEEEEeCCCCc-EEE
Q 012755 206 TQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRC-LFGSSSL-G--EVAIVAGGTDKNGCILKSAELYNSELGT-WET 280 (457)
Q Consensus 206 ~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~-~~~~~~~-~--~~iyv~GG~~~~~~~~~~v~~yd~~t~~-W~~ 280 (457)
+.+++.|+.+ ..+.+||..+++|..+..+..... -.+++.. + +.+++.|+.+ ..+.+||..++. +..
T Consensus 67 g~~l~s~s~D--~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d------~~v~~wd~~~~~~~~~ 138 (297)
T 2pm7_B 67 GTILASCSYD--GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD------GKVSVVEFKENGTTSP 138 (297)
T ss_dssp CSEEEEEETT--TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEEBCSSSCBCC
T ss_pred CCEEEEEcCC--CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC------CcEEEEEecCCCceee
Confidence 5566666543 468899998887755432221111 1122221 1 4566666643 357777776542 210
Q ss_pred CCCCCCCCcceeEEEE---------------CCEEEEEeccCCCCCCCceEEEEECCCCc--eEEcCCCCCCCCCCCCCC
Q 012755 281 LPDMNLPRKLCSGFFM---------------DGKFYIIGGMSSPTDPLTCGEEYNLETRT--WKRIENMYPSNVGTQSNP 343 (457)
Q Consensus 281 ~~~~p~~r~~~~~~~~---------------~g~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~~~~~~~~ 343 (457)
. .+.........+.. ++++++.|+.+ ..+..||..+.. |.....+..
T Consensus 139 ~-~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D------~~v~lwd~~~~~~~~~~~~~l~~--------- 202 (297)
T 2pm7_B 139 I-IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD------NLVKIWKYNSDAQTYVLESTLEG--------- 202 (297)
T ss_dssp E-EEECCSSCEEEEEECCCC------------CCEEEEEETT------SCEEEEEEETTTTEEEEEEEECC---------
T ss_pred e-eeecccCccceEeecCCcccccccCCCCCCcceEEEEcCC------CcEEEEEEcCCCceEEEEEEecC---------
Confidence 0 00000000011111 23466666643 246667765543 544433322
Q ss_pred CCCCCCEEEEE--C---CEEEEEecCCCeEEEEECCCC--cEEEeccCCCccCCCCcceEEE-EEeCCEEEEEcCcCCCC
Q 012755 344 AMSSPPLVAVV--N---NQLYSADQATNVVKKYNKTNN--SWTVVKRLPVRANSFNGWGLAF-KACGNSLLVIGGHRELQ 415 (457)
Q Consensus 344 ~~r~~~~~~~~--~---g~ly~~gg~~~~v~~Yd~~~~--~W~~v~~~p~~~~~~~~~~~~~-~~~~g~lyv~GG~~~~~ 415 (457)
.......+.. + +.+++.++.-+.|..||.++. .|........ . +...-..+ ..-++++++.||.++
T Consensus 203 -H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~-~--~~~~v~~~~~s~~g~~las~~~D~-- 276 (297)
T 2pm7_B 203 -HSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEE-K--FPDVLWRASWSLSGNVLALSGGDN-- 276 (297)
T ss_dssp -CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSS-C--CSSCEEEEEECSSSCCEEEEETTS--
T ss_pred -CCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecc-c--CCCcEEEEEECCCCCEEEEEcCCC--
Confidence 1222222333 2 477777877888999988763 4653211000 0 00111111 123677777777664
Q ss_pred CceEEEEEeeCCCCCCCCCCeeEecc
Q 012755 416 GEIIVLHSWDPTDGNSGEAQWNELAV 441 (457)
Q Consensus 416 ~~~~~v~~y~~~~~~w~~~~W~~l~~ 441 (457)
.+.+|+...+ + +|..+..
T Consensus 277 ----~v~lw~~~~~--g--~w~~~~~ 294 (297)
T 2pm7_B 277 ----KVTLWKENLE--G--KWEPAGE 294 (297)
T ss_dssp ----CEEEEEECTT--S--CEEEC--
T ss_pred ----cEEEEEECCC--C--cEEeccc
Confidence 3677877643 2 6877643
No 103
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.17 E-value=0.11 Score=48.80 Aligned_cols=155 Identities=12% Similarity=-0.000 Sum_probs=85.1
Q ss_pred eCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEE-C
Q 012755 204 VGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWET-L 281 (457)
Q Consensus 204 ~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~-~ 281 (457)
.++.||+.+.. ...+++||+.+++.+.+...+ ...-.+++. -++++|+....+. .....+.+||+.++.-+. +
T Consensus 54 ~~g~l~~~~~~--~~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~~--~~~~~i~~~d~~~~~~~~~~ 128 (333)
T 2dg1_A 54 RQGQLFLLDVF--EGNIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGDF--KSTGGIFAATENGDNLQDII 128 (333)
T ss_dssp TTSCEEEEETT--TCEEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTTS--SSCCEEEEECTTSCSCEEEE
T ss_pred CCCCEEEEECC--CCEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCCC--CCCceEEEEeCCCCEEEEEE
Confidence 35677776532 347999999998877643111 112223333 2677888653221 112578999998887653 2
Q ss_pred CCCCCCCcceeEEE-ECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-CC-EE
Q 012755 282 PDMNLPRKLCSGFF-MDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV-NN-QL 358 (457)
Q Consensus 282 ~~~p~~r~~~~~~~-~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~g-~l 358 (457)
........-..++. -+|++|+.............+++||+.+++...+..... ...+++.. +| .|
T Consensus 129 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------------~~~~i~~~~dg~~l 196 (333)
T 2dg1_A 129 EDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNIS------------VANGIALSTDEKVL 196 (333)
T ss_dssp CSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEES------------SEEEEEECTTSSEE
T ss_pred ccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCC------------cccceEECCCCCEE
Confidence 22211111122222 267888864321111124578899998877665532111 11122222 44 58
Q ss_pred EEEecCCCeEEEEECCC
Q 012755 359 YSADQATNVVKKYNKTN 375 (457)
Q Consensus 359 y~~gg~~~~v~~Yd~~~ 375 (457)
|+.....+.+++||+.+
T Consensus 197 ~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 197 WVTETTANRLHRIALED 213 (333)
T ss_dssp EEEEGGGTEEEEEEECT
T ss_pred EEEeCCCCeEEEEEecC
Confidence 88876667899999854
No 104
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.17 E-value=0.14 Score=48.66 Aligned_cols=30 Identities=7% Similarity=0.176 Sum_probs=22.3
Q ss_pred CC-EEEEEecCCCeEEEEECCCCcEEEeccC
Q 012755 355 NN-QLYSADQATNVVKKYNKTNNSWTVVKRL 384 (457)
Q Consensus 355 ~g-~ly~~gg~~~~v~~Yd~~~~~W~~v~~~ 384 (457)
+| .+|+.+...+.+.+||..+++++.+...
T Consensus 221 dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~ 251 (361)
T 3scy_A 221 DGKFAYLINEIGGTVIAFRYADGMLDEIQTV 251 (361)
T ss_dssp TSSEEEEEETTTCEEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEcCCCCeEEEEEecCCceEEeEEE
Confidence 55 5777775678899999988887666544
No 105
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.16 E-value=0.26 Score=45.66 Aligned_cols=185 Identities=8% Similarity=0.063 Sum_probs=92.6
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPD 283 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~ 283 (457)
++..++.|+.. ..+.+||..+++....-.- ....-.+++. -++++++.|+.+ ..+.+||..+++-...
T Consensus 34 ~~~~l~s~~~d--g~i~iw~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~d------~~i~vwd~~~~~~~~~-- 102 (312)
T 4ery_A 34 NGEWLASSSAD--KLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSNLLVSASDD------KTLKIWDVSSGKCLKT-- 102 (312)
T ss_dssp TSSEEEEEETT--SCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTCCEEEE--
T ss_pred CCCEEEEeeCC--CeEEEEeCCCcccchhhcc-CCCceEEEEEcCCCCEEEEECCC------CEEEEEECCCCcEEEE--
Confidence 45555555543 3577888877766443111 1111112222 256667777643 4688899887763221
Q ss_pred CCCCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEE
Q 012755 284 MNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLY 359 (457)
Q Consensus 284 ~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly 359 (457)
+.........+.+ ++.+.+.|+.+ ..+..||+.+.+-... +.. .......+.. ++.++
T Consensus 103 ~~~~~~~v~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~--~~~----------~~~~v~~~~~~~~~~~l 164 (312)
T 4ery_A 103 LKGHSNYVFCCNFNPQSNLIVSGSFD------ESVRIWDVKTGKCLKT--LPA----------HSDPVSAVHFNRDGSLI 164 (312)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEETT------SCEEEEETTTCCEEEE--ECC----------CSSCEEEEEECTTSSEE
T ss_pred EcCCCCCEEEEEEcCCCCEEEEEeCC------CcEEEEECCCCEEEEE--ecC----------CCCcEEEEEEcCCCCEE
Confidence 1111111111222 45566666543 3578899987653322 111 1111222223 67777
Q ss_pred EEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 360 SADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 360 ~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
+.++..+.+..||..+.+-...-...... ........-+++.++.|+.++ .+.+||..+
T Consensus 165 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~d~------~i~iwd~~~ 223 (312)
T 4ery_A 165 VSSSYDGLCRIWDTASGQCLKTLIDDDNP----PVSFVKFSPNGKYILAATLDN------TLKLWDYSK 223 (312)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCSSCC----CEEEEEECTTSSEEEEEETTT------EEEEEETTT
T ss_pred EEEeCCCcEEEEECCCCceeeEEeccCCC----ceEEEEECCCCCEEEEEcCCC------eEEEEECCC
Confidence 88888889999999887543221111110 001111123556666665543 466777665
No 106
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.15 E-value=0.39 Score=45.77 Aligned_cols=228 Identities=11% Similarity=0.071 Sum_probs=107.5
Q ss_pred cEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCcEEeCCC----C
Q 012755 161 HWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQ----M 236 (457)
Q Consensus 161 ~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~----l 236 (457)
..|...+....+..+|..+..-...-..+... ........++..++.||.. ..+.+|+.....-..... +
T Consensus 77 ~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~----v~~~~~sp~g~~lasg~~d--~~i~v~~~~~~~~~~~~~~~~~~ 150 (354)
T 2pbi_B 77 RRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTW----VMACAYAPSGCAIACGGLD--NKCSVYPLTFDKNENMAAKKKSV 150 (354)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECSSSC----CCEEEECTTSSEEEEESTT--SEEEEEECCCCTTCCSGGGCEEE
T ss_pred CEEEEEeCCCeEEEEECCCCCcceEEecCCCC----EEEEEECCCCCEEEEeeCC--CCEEEEEEeccccccccccceee
Confidence 34444444566777887665432211111111 1111233456666666653 356677654321000000 0
Q ss_pred C-CCccceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE----CCEEEEEeccCCCC
Q 012755 237 N-LPRCLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM----DGKFYIIGGMSSPT 310 (457)
Q Consensus 237 p-~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~----~g~iyv~GG~~~~~ 310 (457)
. ....-.+++.. ++..++.|+.+ ..+.++|..+++-...- ...........+ ++.+++.|+.+
T Consensus 151 ~~h~~~v~~~~~~~~~~~l~t~s~D------~~v~lwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~g~~l~sgs~D--- 219 (354)
T 2pbi_B 151 AMHTNYLSACSFTNSDMQILTASGD------GTCALWDVESGQLLQSF--HGHGADVLCLDLAPSETGNTFVSGGCD--- 219 (354)
T ss_dssp EECSSCEEEEEECSSSSEEEEEETT------SEEEEEETTTCCEEEEE--ECCSSCEEEEEECCCSSCCEEEEEETT---
T ss_pred eccCCcEEEEEEeCCCCEEEEEeCC------CcEEEEeCCCCeEEEEE--cCCCCCeEEEEEEeCCCCCEEEEEeCC---
Confidence 0 00001111111 34444555532 46888998887643211 001111111212 34666666643
Q ss_pred CCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEeccCCCcc
Q 012755 311 DPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRA 388 (457)
Q Consensus 311 ~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~ 388 (457)
..+..||+.+.+....-.. .......+.+ ++.+++.|+..+.+..||..++.-..+-......
T Consensus 220 ---g~v~~wd~~~~~~~~~~~~------------h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~ 284 (354)
T 2pbi_B 220 ---KKAMVWDMRSGQCVQAFET------------HESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESII 284 (354)
T ss_dssp ---SCEEEEETTTCCEEEEECC------------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCC
T ss_pred ---CeEEEEECCCCcEEEEecC------------CCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcc
Confidence 3578899988765432211 1111222333 5777778888889999999876432221111110
Q ss_pred CCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 389 NSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 389 ~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
. .........++++++.|+.++ .+.+||..++
T Consensus 285 ~---~~~~~~~s~~g~~l~~g~~d~------~i~vwd~~~~ 316 (354)
T 2pbi_B 285 F---GASSVDFSLSGRLLFAGYNDY------TINVWDVLKG 316 (354)
T ss_dssp S---CEEEEEECTTSSEEEEEETTS------CEEEEETTTC
T ss_pred c---ceeEEEEeCCCCEEEEEECCC------cEEEEECCCC
Confidence 0 111111223677777777653 4788888663
No 107
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.14 E-value=0.11 Score=48.88 Aligned_cols=196 Identities=12% Similarity=-0.002 Sum_probs=102.4
Q ss_pred ccEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEe-CCEEEEEcee---------------cCCcEEEEE
Q 012755 160 EHWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAV-GTQLLVFGRE---------------LSGFAIWMY 223 (457)
Q Consensus 160 ~~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~-~~~lyv~GG~---------------~~~~~v~~y 223 (457)
++.||+......+..||+.+.....+................+.. ++.||+.-.. .....+++|
T Consensus 91 ~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 170 (322)
T 2fp8_A 91 NNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKY 170 (322)
T ss_dssp TTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEE
T ss_pred CCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEE
Confidence 467888755556889998766554443211111111110112223 5788886321 123569999
Q ss_pred ECCCCcEEeCC-CCCCCccceeEEee-C-CEEEEEeeecCCCCccceEEEEeCCC---CcEEECCCCCCCCcceeEEEE-
Q 012755 224 SLIANCWSKCP-QMNLPRCLFGSSSL-G-EVAIVAGGTDKNGCILKSAELYNSEL---GTWETLPDMNLPRKLCSGFFM- 296 (457)
Q Consensus 224 d~~t~~W~~l~-~lp~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~v~~yd~~t---~~W~~~~~~p~~r~~~~~~~~- 296 (457)
|+.+++.+.+. .+..| .+++.- + +.+||.-. ....+.+||..+ ...+....++. .....+
T Consensus 171 d~~~~~~~~~~~~~~~p---~gia~~~dg~~lyv~d~------~~~~I~~~~~~~~~~~~~~~~~~~~g----P~gi~~d 237 (322)
T 2fp8_A 171 DPSTKETTLLLKELHVP---GGAEVSADSSFVLVAEF------LSHQIVKYWLEGPKKGTAEVLVKIPN----PGNIKRN 237 (322)
T ss_dssp ETTTTEEEEEEEEESCC---CEEEECTTSSEEEEEEG------GGTEEEEEESSSTTTTCEEEEEECSS----EEEEEEC
T ss_pred eCCCCEEEEeccCCccC---cceEECCCCCEEEEEeC------CCCeEEEEECCCCcCCccceEEeCCC----CCCeEEC
Confidence 99888765432 12222 223332 3 45888732 135789999875 23433322221 222333
Q ss_pred -CCEEEEEeccCCCC----CCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEE
Q 012755 297 -DGKFYIIGGMSSPT----DPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQATNVVKKY 371 (457)
Q Consensus 297 -~g~iyv~GG~~~~~----~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~~~~v~~Y 371 (457)
+|.|||........ .....+.+||+....-..+..... ........++.-+++||+.+...+.|.+|
T Consensus 238 ~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g--------~~~~~~~~~~~~~g~L~v~~~~~~~i~~~ 309 (322)
T 2fp8_A 238 ADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPP--------FAGEHFEQIQEHDGLLYIGTLFHGSVGIL 309 (322)
T ss_dssp TTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTT--------TTTSCCCEEEEETTEEEEECSSCSEEEEE
T ss_pred CCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCC--------CccccceEEEEeCCEEEEeecCCCceEEE
Confidence 57899875321000 012468899987554444432110 00122334555689999988777899999
Q ss_pred ECCCC
Q 012755 372 NKTNN 376 (457)
Q Consensus 372 d~~~~ 376 (457)
+++.+
T Consensus 310 ~~~~~ 314 (322)
T 2fp8_A 310 VYDKK 314 (322)
T ss_dssp EC---
T ss_pred ecccc
Confidence 98654
No 108
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.13 E-value=0.72 Score=44.89 Aligned_cols=147 Identities=8% Similarity=0.009 Sum_probs=78.1
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPD 283 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~ 283 (457)
++.+++.|+.+. .+.+||..+++....-... ...-.+++. -++.+++.|+.+ ..+.+||..+..-...
T Consensus 119 ~~~~l~s~s~Dg--~i~vwd~~~~~~~~~l~~h-~~~V~~v~~~~~~~~l~sgs~D------~~i~iwd~~~~~~~~~-- 187 (410)
T 1vyh_C 119 VFSVMVSASEDA--TIKVWDYETGDFERTLKGH-TDSVQDISFDHSGKLLASCSAD------MTIKLWDFQGFECIRT-- 187 (410)
T ss_dssp SSSEEEEEESSS--CEEEEETTTCCCCEEECCC-SSCEEEEEECTTSSEEEEEETT------SCCCEEETTSSCEEEC--
T ss_pred CCCEEEEEeCCC--eEEEEECCCCcEEEEEecc-CCcEEEEEEcCCCCEEEEEeCC------CeEEEEeCCCCceeEE--
Confidence 456667676543 5888898876543211111 111112222 256777777754 3466788876553221
Q ss_pred CCCCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEE
Q 012755 284 MNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLY 359 (457)
Q Consensus 284 ~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly 359 (457)
+.........+.+ ++...+.|+.+ ..+..||..++.-...- .. .......+.. ++.++
T Consensus 188 ~~~h~~~V~~v~~~p~~~~l~s~s~D------~~i~~wd~~~~~~~~~~--~~----------h~~~v~~~~~~~~g~~l 249 (410)
T 1vyh_C 188 MHGHDHNVSSVSIMPNGDHIVSASRD------KTIKMWEVQTGYCVKTF--TG----------HREWVRMVRPNQDGTLI 249 (410)
T ss_dssp CCCCSSCEEEEEECSSSSEEEEEETT------SEEEEEETTTCCEEEEE--EC----------CSSCEEEEEECTTSSEE
T ss_pred EcCCCCCEEEEEEeCCCCEEEEEeCC------CeEEEEECCCCcEEEEE--eC----------CCccEEEEEECCCCCEE
Confidence 2211112222222 55666666543 46788999887643221 11 1111122222 57778
Q ss_pred EEecCCCeEEEEECCCCcEEE
Q 012755 360 SADQATNVVKKYNKTNNSWTV 380 (457)
Q Consensus 360 ~~gg~~~~v~~Yd~~~~~W~~ 380 (457)
+.|+..+.|..||..+..-..
T Consensus 250 ~s~s~D~~v~vwd~~~~~~~~ 270 (410)
T 1vyh_C 250 ASCSNDQTVRVWVVATKECKA 270 (410)
T ss_dssp EEEETTSCEEEEETTTCCEEE
T ss_pred EEEcCCCeEEEEECCCCceee
Confidence 888888899999998876543
No 109
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.11 E-value=0.099 Score=49.77 Aligned_cols=181 Identities=9% Similarity=0.107 Sum_probs=93.8
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCC--CCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEEC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMN--LPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWETL 281 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp--~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~ 281 (457)
++.+++.|+.+. .+.+||..+++|.....+. ....-.+++. -++..++.|+.+ ..+.++|..++.++.+
T Consensus 27 ~g~~las~~~D~--~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D------~~v~iw~~~~~~~~~~ 98 (345)
T 3fm0_A 27 AGTLLASCGGDR--RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD------ATTCIWKKNQDDFECV 98 (345)
T ss_dssp TSSCEEEEETTS--CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT------SCEEEEEECCC-EEEE
T ss_pred CCCEEEEEcCCC--eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC------CcEEEEEccCCCeEEE
Confidence 555666665433 5777888887765322111 1111122222 256667777754 3466778777766544
Q ss_pred CCCCCCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCc-eEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CC
Q 012755 282 PDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRT-WKRIENMYPSNVGTQSNPAMSSPPLVAVV--NN 356 (457)
Q Consensus 282 ~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~-W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g 356 (457)
..+.........+.+ ++++.+.|+.+ ..+..||..+.. +..+..+.. .......+.. ++
T Consensus 99 ~~~~~h~~~v~~v~~sp~~~~l~s~s~D------~~v~iwd~~~~~~~~~~~~~~~----------h~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 99 TTLEGHENEVKSVAWAPSGNLLATCSRD------KSVWVWEVDEEDEYECVSVLNS----------HTQDVKHVVWHPSQ 162 (345)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETT------SCEEEEEECTTSCEEEEEEECC----------CCSCEEEEEECSSS
T ss_pred EEccCCCCCceEEEEeCCCCEEEEEECC------CeEEEEECCCCCCeEEEEEecC----------cCCCeEEEEECCCC
Confidence 333222222222222 56666666643 347778876643 333322211 1111122222 56
Q ss_pred EEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEE-EeCCEEEEEcCcCC
Q 012755 357 QLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFK-ACGNSLLVIGGHRE 413 (457)
Q Consensus 357 ~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~-~~~g~lyv~GG~~~ 413 (457)
.+++.|+..+.+..||..++.|..+..+..... .-..+. .-+++.++.|+.++
T Consensus 163 ~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~----~v~~l~~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 163 ELLASASYDDTVKLYREEEDDWVCCATLEGHES----TVWSLAFDPSGQRLASCSDDR 216 (345)
T ss_dssp SCEEEEETTSCEEEEEEETTEEEEEEEECCCSS----CEEEEEECTTSSEEEEEETTS
T ss_pred CEEEEEeCCCcEEEEEecCCCEEEEEEecCCCC----ceEEEEECCCCCEEEEEeCCC
Confidence 777788788899999999998876554432221 111121 22566667776653
No 110
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.11 E-value=0.36 Score=45.44 Aligned_cols=232 Identities=10% Similarity=0.048 Sum_probs=106.7
Q ss_pred EEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeE--EeCCEEEEEceecCCcEEEEEECCCC-----cEEeCCC
Q 012755 163 VYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESL--AVGTQLLVFGRELSGFAIWMYSLIAN-----CWSKCPQ 235 (457)
Q Consensus 163 l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~--~~~~~lyv~GG~~~~~~v~~yd~~t~-----~W~~l~~ 235 (457)
|...+....+..||...+.+..+..+... .|...-..+ ..++.+++.|+.+. .+.+||.... .+..+..
T Consensus 27 las~~~D~~i~lw~~~~~~~~~~~~~~~~--~h~~~v~~v~~sp~~~~las~s~D~--~v~iw~~~~~~~~~~~~~~~~~ 102 (330)
T 2hes_X 27 LATGSTDRKIKLVSVKYDDFTLIDVLDET--AHKKAIRSVAWRPHTSLLAAGSFDS--TVSIWAKEESADRTFEMDLLAI 102 (330)
T ss_dssp EEEEESSSCEEEEECSSSCCEEEEEECTT--CCCSCEEEEEECTTSSEEEEEETTS--CEEEEEC-------CCCEEEEE
T ss_pred EEEEcCCCEEEEEEecCCCeEEEEEEecC--CccCCEEEEEECCCCCEEEEEeCCC--cEEEEEcccCcCccccceeEEE
Confidence 33334456777888876543322211110 011100112 23566666676543 4677776432 1211111
Q ss_pred CCC-CccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCC--CcEEECCCCCCCCcceeEEEE--CCEEEEEeccCCC
Q 012755 236 MNL-PRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSEL--GTWETLPDMNLPRKLCSGFFM--DGKFYIIGGMSSP 309 (457)
Q Consensus 236 lp~-~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t--~~W~~~~~~p~~r~~~~~~~~--~g~iyv~GG~~~~ 309 (457)
+.. ...-.+++. -+++.++.|+.+ ..+.++|..+ ..++.+..+.........+.. ++.+.+.|+.+
T Consensus 103 ~~~h~~~V~~v~~sp~g~~las~s~D------~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D-- 174 (330)
T 2hes_X 103 IEGHENEVKGVAWSNDGYYLATCSRD------KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD-- 174 (330)
T ss_dssp EC----CEEEEEECTTSCEEEEEETT------SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT--
T ss_pred EcCCCCcEEEEEECCCCCEEEEEeCC------CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC--
Confidence 111 011111222 256666666644 3577888743 234433222221122222222 56666666643
Q ss_pred CCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--C--CEEEEEecCCCeEEEEECCC------CcEE
Q 012755 310 TDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--N--NQLYSADQATNVVKKYNKTN------NSWT 379 (457)
Q Consensus 310 ~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~--g~ly~~gg~~~~v~~Yd~~~------~~W~ 379 (457)
..+..||..++.|..+..+.. .......+.+ + +..++.|+..+.|..||..+ ..|.
T Consensus 175 ----~~i~iW~~~~~~~~~~~~~~~----------h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~ 240 (330)
T 2hes_X 175 ----DTVRIWKDYDDDWECVAVLNG----------HEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWV 240 (330)
T ss_dssp ----SCEEEEEEETTEEEEEEEECC----------CSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEE
T ss_pred ----CeEEEEECCCCCeeEEEEccC----------CCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeE
Confidence 346778887777766554432 1111112222 2 44566676777888887643 2566
Q ss_pred EeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 380 VVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 380 ~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
.+..++.... ..-..+....+.+++.||.++ .+.+|+..++
T Consensus 241 ~~~~~~~~h~---~~v~~v~~s~~~~l~s~~~dg------~v~iw~~~~~ 281 (330)
T 2hes_X 241 CEAILPDVHK---RQVYNVAWGFNGLIASVGADG------VLAVYEEVDG 281 (330)
T ss_dssp EEEECCSCCS---SCEEEEEECTTSCEEEEETTS------CEEEEEEETT
T ss_pred Eeeecccccc---cceEEEEEcCCCEEEEEeCCC------EEEEEEcCCC
Confidence 6554443111 111222222444666666653 4777887664
No 111
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.09 E-value=1.1 Score=43.17 Aligned_cols=222 Identities=11% Similarity=-0.009 Sum_probs=110.2
Q ss_pred EEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEE--eCCEEEEEceecCCcEEEEEECCCCcEE-eCCCCCC
Q 012755 162 WVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLA--VGTQLLVFGRELSGFAIWMYSLIANCWS-KCPQMNL 238 (457)
Q Consensus 162 ~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~--~~~~lyv~GG~~~~~~v~~yd~~t~~W~-~l~~lp~ 238 (457)
.+...+....+..||..+.+-...... +...-..+. .++.+++.|+.. ..+.+||..+.+-. .+.. .
T Consensus 111 ~l~~~~~dg~i~iwd~~~~~~~~~~~~------h~~~v~~~~~~~~~~~l~s~s~d--~~i~iwd~~~~~~~~~~~~--h 180 (420)
T 3vl1_A 111 RFILGTTEGDIKVLDSNFNLQREIDQA------HVSEITKLKFFPSGEALISSSQD--MQLKIWSVKDGSNPRTLIG--H 180 (420)
T ss_dssp EEEEEETTSCEEEECTTSCEEEEETTS------SSSCEEEEEECTTSSEEEEEETT--SEEEEEETTTCCCCEEEEC--C
T ss_pred EEEEEECCCCEEEEeCCCcceeeeccc------ccCccEEEEECCCCCEEEEEeCC--CeEEEEeCCCCcCceEEcC--C
Confidence 444444456788899876644332111 100001122 255566666543 46889998765421 1111 1
Q ss_pred CccceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCcEEEC-CCCCCCCcc-eeEE---------------------
Q 012755 239 PRCLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGTWETL-PDMNLPRKL-CSGF--------------------- 294 (457)
Q Consensus 239 ~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~-~~~p~~r~~-~~~~--------------------- 294 (457)
...-.+++.. ++..++.|+.+ ..+.+||..+++-... ......... ...+
T Consensus 181 ~~~v~~~~~~~~~~~l~s~~~d------~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~ 254 (420)
T 3vl1_A 181 RATVTDIAIIDRGRNVLSASLD------GTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLE 254 (420)
T ss_dssp SSCEEEEEEETTTTEEEEEETT------SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTC
T ss_pred CCcEEEEEEcCCCCEEEEEcCC------CcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceE
Confidence 1111222222 55666666643 3578889887763222 111001111 1111
Q ss_pred -EECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCE-EEEEecCCCeEEE
Q 012755 295 -FMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQ-LYSADQATNVVKK 370 (457)
Q Consensus 295 -~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~-ly~~gg~~~~v~~ 370 (457)
.-++++.+.|+.+ ..+..||+.+..-....... .......+.. ++. +++.|+..+.+..
T Consensus 255 ~s~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~l~~g~~dg~i~v 317 (420)
T 3vl1_A 255 FGTYGKYVIAGHVS------GVITVHNVFSKEQTIQLPSK-----------FTCSCNSLTVDGNNANYIYAGYENGMLAQ 317 (420)
T ss_dssp SSCTTEEEEEEETT------SCEEEEETTTCCEEEEECCT-----------TSSCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred EcCCCCEEEEEcCC------CeEEEEECCCCceeEEcccc-----------cCCCceeEEEeCCCCCEEEEEeCCCeEEE
Confidence 1256666666543 34788999876532221110 1111222233 454 7777878889999
Q ss_pred EECCCCcE--EEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 371 YNKTNNSW--TVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 371 Yd~~~~~W--~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
||..+..- ..+..-.. ..-..+...++++++.|+.++ .+.+|+...
T Consensus 318 wd~~~~~~~~~~~~~~~~------~~v~~~~~~~~~~l~s~~~d~------~v~iw~~~~ 365 (420)
T 3vl1_A 318 WDLRSPECPVGEFLINEG------TPINNVYFAAGALFVSSGFDT------SIKLDIISD 365 (420)
T ss_dssp EETTCTTSCSEEEEESTT------SCEEEEEEETTEEEEEETTTE------EEEEEEECC
T ss_pred EEcCCCcCchhhhhccCC------CCceEEEeCCCCEEEEecCCc------cEEEEeccC
Confidence 99987531 22211111 111223445788888888763 578888765
No 112
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.07 E-value=0.11 Score=49.18 Aligned_cols=150 Identities=11% Similarity=-0.022 Sum_probs=77.8
Q ss_pred EEEEEECCCCcEEeCCCCCCCccceeEE-eeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCC-CCcceeEEE-
Q 012755 219 AIWMYSLIANCWSKCPQMNLPRCLFGSS-SLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNL-PRKLCSGFF- 295 (457)
Q Consensus 219 ~v~~yd~~t~~W~~l~~lp~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~-~r~~~~~~~- 295 (457)
.++.+|..+++++.+...........++ .-++++|+.+...+ ...+.+||..+++++.+..... ...-..++.
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~----~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~s 94 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDD----EGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVD 94 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETT----EEEEEEEEEETTEEEEEEEEEEESCCCSEEEEE
T ss_pred EEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCC----CceEEEEEecCCcEEEeeeeecCCCCCEEEEEC
Confidence 4778888888886643211111111122 23677877754321 3578899998888776643211 111122232
Q ss_pred ECCE-EEEEeccCCCCCCCceEEEEECC-CCceEEcCCCCCCCCCCCCCCCCC---CCCEEEEE--CCEEEEEecCCCeE
Q 012755 296 MDGK-FYIIGGMSSPTDPLTCGEEYNLE-TRTWKRIENMYPSNVGTQSNPAMS---SPPLVAVV--NNQLYSADQATNVV 368 (457)
Q Consensus 296 ~~g~-iyv~GG~~~~~~~~~~~~~yd~~-t~~W~~~~~~~~~~~~~~~~~~~r---~~~~~~~~--~g~ly~~gg~~~~v 368 (457)
-+|+ +|+.+.. ...+.+||+. ++....+...... +..+..+ .....+++ +|++|+.+...+.+
T Consensus 95 pdg~~l~~~~~~------~~~v~v~~~~~~g~~~~~~~~~~~----~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v 164 (347)
T 3hfq_A 95 EARQLVYSANYH------KGTAEVMKIAADGALTLTDTVQHS----GHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKV 164 (347)
T ss_dssp TTTTEEEEEETT------TTEEEEEEECTTSCEEEEEEEECC----CCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEE
T ss_pred CCCCEEEEEeCC------CCEEEEEEeCCCCCeeecceeecC----CCCCCccccCCCceEEEECCCCcEEEEeCCCCEE
Confidence 3454 6665421 2457788874 3444444322110 0000011 11122233 67788887667889
Q ss_pred EEEECC-CCcEEEec
Q 012755 369 KKYNKT-NNSWTVVK 382 (457)
Q Consensus 369 ~~Yd~~-~~~W~~v~ 382 (457)
..||.+ +++...+.
T Consensus 165 ~~~~~~~~g~~~~~~ 179 (347)
T 3hfq_A 165 YVYNVSDAGQLSEQS 179 (347)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred EEEEECCCCcEEEee
Confidence 999988 56666544
No 113
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.03 E-value=0.71 Score=43.97 Aligned_cols=149 Identities=11% Similarity=-0.011 Sum_probs=79.2
Q ss_pred CcEEEEEECCCCcEEeCCCCCCCccceeEEee-CCE-EEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEE
Q 012755 217 GFAIWMYSLIANCWSKCPQMNLPRCLFGSSSL-GEV-AIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGF 294 (457)
Q Consensus 217 ~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~ 294 (457)
...++++|..+++.+.+..-+.. ..+....- ++. |++... .........++++|..++.++.+.. ..+.......
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~~~-~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~ 243 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDTAW-LGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTHE 243 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEESSC-EEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEEE
T ss_pred cceEEEEECCCCcEEeeccCCcc-cccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeEeec-cCCCccccce
Confidence 35789999998887665421111 11111122 243 444432 2111122578999998888877754 2111111112
Q ss_pred EE--CCE-EEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-CCEEEEEec-------
Q 012755 295 FM--DGK-FYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV-NNQLYSADQ------- 363 (457)
Q Consensus 295 ~~--~g~-iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~g~ly~~gg------- 363 (457)
.+ +|+ |+..+ ..... ....++.+|+.+++...+...+. .. ....- +|+++++.+
T Consensus 244 ~~spdg~~l~~~~-~~~~~-~~~~l~~~d~~~g~~~~l~~~~~----------~~---~~~s~~dg~~l~~~~~~~p~~~ 308 (396)
T 3c5m_A 244 FWIPDGSAMAYVS-YFKGQ-TDRVIYKANPETLENEEVMVMPP----------CS---HLMSNFDGSLMVGDGCDAPVDV 308 (396)
T ss_dssp EECTTSSCEEEEE-EETTT-CCEEEEEECTTTCCEEEEEECCS----------EE---EEEECSSSSEEEEEECCC----
T ss_pred EECCCCCEEEEEe-cCCCC-ccceEEEEECCCCCeEEeeeCCC----------CC---CCccCCCCceEEEecCCcceee
Confidence 22 555 44432 22111 22458999999888776654322 11 22333 677666532
Q ss_pred ---------CCCeEEEEECCCCcEEEecc
Q 012755 364 ---------ATNVVKKYNKTNNSWTVVKR 383 (457)
Q Consensus 364 ---------~~~~v~~Yd~~~~~W~~v~~ 383 (457)
....++.+|++++..+.+..
T Consensus 309 ~~~~~~~~~~~~~i~~~d~~~~~~~~l~~ 337 (396)
T 3c5m_A 309 ADADSYNIENDPFLYVLNTKAKSAQKLCK 337 (396)
T ss_dssp ------CCCCCCEEEEEETTTTBCCEEEE
T ss_pred ccccccccCCCCcEEEEecccCceEEccC
Confidence 23679999999887666543
No 114
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.01 E-value=0.17 Score=47.38 Aligned_cols=203 Identities=13% Similarity=0.164 Sum_probs=98.0
Q ss_pred CEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCc-cceeEEee-C--CEEEEEeeecCCCCccceEEEEeCCCC-cEEE
Q 012755 206 TQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPR-CLFGSSSL-G--EVAIVAGGTDKNGCILKSAELYNSELG-TWET 280 (457)
Q Consensus 206 ~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r-~~~~~~~~-~--~~iyv~GG~~~~~~~~~~v~~yd~~t~-~W~~ 280 (457)
+.+++.|+.+ ..+.+||..+++|..+..+.... .-.+++.. + +.+++.|+.+ ..+.++|..++ .|..
T Consensus 71 ~~~l~s~s~D--~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D------~~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 71 GNILASCSYD--RKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD------GAISLLTYTGEGQWEV 142 (316)
T ss_dssp SSCEEEEETT--SCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSS------SCEEEEEECSSSCEEE
T ss_pred CCEEEEEECC--CEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCC------CCEEEEecCCCCCcce
Confidence 4566666543 35888898887665432221111 11122222 2 4566666644 35677777665 5754
Q ss_pred CCCCCCCCcceeEEEE-------------------CCEEEEEeccCCCCCCCceEEEEECCC-CceEEcCCCCCCCCCCC
Q 012755 281 LPDMNLPRKLCSGFFM-------------------DGKFYIIGGMSSPTDPLTCGEEYNLET-RTWKRIENMYPSNVGTQ 340 (457)
Q Consensus 281 ~~~~p~~r~~~~~~~~-------------------~g~iyv~GG~~~~~~~~~~~~~yd~~t-~~W~~~~~~~~~~~~~~ 340 (457)
.............+.. .+++++.|+.+ ..+..||..+ ..|..+..+..
T Consensus 143 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D------~~v~lWd~~~~~~~~~~~~l~~------ 210 (316)
T 3bg1_A 143 KKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCD------NLIKLWKEEEDGQWKEEQKLEA------ 210 (316)
T ss_dssp CCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTT------SBCCEEEECTTSCEEEEECCBC------
T ss_pred eeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCC------CeEEEEEeCCCCccceeeeccc------
Confidence 3222111110001111 12445555433 3456677764 45766654432
Q ss_pred CCCCCCCCCEEEEE--C----CEEEEEecCCCeEEEEECCC---CcEEE--eccCCCccCCCCcceEEEE-EeCCEEEEE
Q 012755 341 SNPAMSSPPLVAVV--N----NQLYSADQATNVVKKYNKTN---NSWTV--VKRLPVRANSFNGWGLAFK-ACGNSLLVI 408 (457)
Q Consensus 341 ~~~~~r~~~~~~~~--~----g~ly~~gg~~~~v~~Yd~~~---~~W~~--v~~~p~~~~~~~~~~~~~~-~~~g~lyv~ 408 (457)
.......+.. + +.+++.++.-+.|..||.++ ..|.. +.... ..-..++ .-++++++.
T Consensus 211 ----h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~-------~~v~~v~~sp~g~~las 279 (316)
T 3bg1_A 211 ----HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFN-------DVVWHVSWSITANILAV 279 (316)
T ss_dssp ----CSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECS-------SCEEEEEECTTTCCEEE
T ss_pred ----CCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCC-------CcEEEEEEcCCCCEEEE
Confidence 1111122222 2 25677777788999999876 33421 11110 1111121 235777777
Q ss_pred cCcCCCCCceEEEEEeeCCCCCCCCCCeeEeccccccCceE
Q 012755 409 GGHRELQGEIIVLHSWDPTDGNSGEAQWNELAVRERAGAFV 449 (457)
Q Consensus 409 GG~~~~~~~~~~v~~y~~~~~~w~~~~W~~l~~~~~~~~~~ 449 (457)
||.++ .+.+|+...+ + +|..+........++
T Consensus 280 ~~~D~------~v~lw~~~~~--g--~~~~~~~~~~~~~~~ 310 (316)
T 3bg1_A 280 SGGDN------KVTLWKESVD--G--QWVCISDVNKGQGSV 310 (316)
T ss_dssp EESSS------CEEEEEECTT--S--CEEEEEECC------
T ss_pred EcCCC------eEEEEEECCC--C--cEEEeeeccCCCCce
Confidence 87664 4777887643 1 698887655444444
No 115
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.00 E-value=0.77 Score=42.97 Aligned_cols=190 Identities=8% Similarity=0.000 Sum_probs=90.5
Q ss_pred EEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEE--eCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCC
Q 012755 162 WVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLA--VGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLP 239 (457)
Q Consensus 162 ~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~--~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~ 239 (457)
.++..+....+..||..+.+-... +.. +...-..+. .++..++.|+. ...+.+||..+++-...-..+.+
T Consensus 46 ~l~~~~~dg~i~vwd~~~~~~~~~--~~~----h~~~v~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~ 117 (369)
T 3zwl_B 46 LLFSCSKDSSASVWYSLNGERLGT--LDG----HTGTIWSIDVDCFTKYCVTGSA--DYSIKLWDVSNGQCVATWKSPVP 117 (369)
T ss_dssp EEEEEESSSCEEEEETTTCCEEEE--ECC----CSSCEEEEEECTTSSEEEEEET--TTEEEEEETTTCCEEEEEECSSC
T ss_pred EEEEEeCCCEEEEEeCCCchhhhh--hhh----cCCcEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCcEEEEeecCCC
Confidence 444444456778888766543221 111 110001122 24555566654 34689999987765433221211
Q ss_pred ccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCc----EEECCCCCC-----CC--cceeEEEE--CCEEEEEec
Q 012755 240 RCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGT----WETLPDMNL-----PR--KLCSGFFM--DGKFYIIGG 305 (457)
Q Consensus 240 r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~----W~~~~~~p~-----~r--~~~~~~~~--~g~iyv~GG 305 (457)
-.+++. -++..++.++.+.. .....+.+||..+.. +......+. .. .....+.+ +++..+.|+
T Consensus 118 --v~~~~~~~~~~~l~~~~~~~~-~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (369)
T 3zwl_B 118 --VKRVEFSPCGNYFLAILDNVM-KNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGH 194 (369)
T ss_dssp --EEEEEECTTSSEEEEEECCBT-TBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEE
T ss_pred --eEEEEEccCCCEEEEecCCcc-CCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEc
Confidence 122222 24555555554311 123567777765442 222211110 00 01122222 455556654
Q ss_pred cCCCCCCCceEEEEECCCC-ceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEE
Q 012755 306 MSSPTDPLTCGEEYNLETR-TWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSWTV 380 (457)
Q Consensus 306 ~~~~~~~~~~~~~yd~~t~-~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~~ 380 (457)
.+ ..+..||+.+. .-... +.. .......+.+ ++.+++.++..+.+..||..+..-..
T Consensus 195 ~d------g~i~i~d~~~~~~~~~~--~~~----------~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 195 KD------GKISKYDVSNNYEYVDS--IDL----------HEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLK 254 (369)
T ss_dssp TT------SEEEEEETTTTTEEEEE--EEC----------CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CC------CEEEEEECCCCcEeEEE--Eec----------CCCceeEEEECCCCCEEEEecCCceEEEEECCCCceee
Confidence 32 46888999873 32211 111 1111222223 67777777778899999998875443
No 116
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.95 E-value=0.53 Score=49.65 Aligned_cols=114 Identities=15% Similarity=0.159 Sum_probs=72.0
Q ss_pred EeeCCEEEEEeeecCCCCccceEEEEeCCCCc--EEECCCCCCC--------CcceeEEEECCEEEEEeccCCCCCCCce
Q 012755 246 SSLGEVAIVAGGTDKNGCILKSAELYNSELGT--WETLPDMNLP--------RKLCSGFFMDGKFYIIGGMSSPTDPLTC 315 (457)
Q Consensus 246 ~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~~--------r~~~~~~~~~g~iyv~GG~~~~~~~~~~ 315 (457)
++.++.||+... ...++.+|..|++ |+.-...+.. ....+.++.+++||+.. ....
T Consensus 67 ~v~~g~vyv~~~-------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~-------~dg~ 132 (689)
T 1yiq_A 67 IVVDGVMYTTGP-------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGV-------LDGR 132 (689)
T ss_dssp EEETTEEEEECG-------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEEC-------TTSE
T ss_pred EEECCEEEEEcC-------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEc-------cCCE
Confidence 467999999753 3568999998886 9875433211 11223467799999853 1346
Q ss_pred EEEEECCCCc--eEEcCC-CCCCCCCCCCCCCCCCCCEEEEECCEEEEEec-----CCCeEEEEECCCCc--EEEe
Q 012755 316 GEEYNLETRT--WKRIEN-MYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQ-----ATNVVKKYNKTNNS--WTVV 381 (457)
Q Consensus 316 ~~~yd~~t~~--W~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg-----~~~~v~~Yd~~~~~--W~~v 381 (457)
+.++|.+|++ |+.-.. ... .......+.++.++.+|+-.+ ..+.++.||.++++ |+.-
T Consensus 133 l~AlDa~TG~~~W~~~~~~~~~--------~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 133 LEAIDAKTGQRAWSVDTRADHK--------RSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEEETTTCCEEEEEECCSCTT--------SCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCCEeeeecCcCCCC--------CCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 8999998875 876542 111 001111223457898887532 24689999999874 8764
No 117
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.92 E-value=0.068 Score=51.12 Aligned_cols=150 Identities=14% Similarity=0.108 Sum_probs=72.9
Q ss_pred eCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccc-eeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCc-EEE
Q 012755 204 VGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCL-FGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGT-WET 280 (457)
Q Consensus 204 ~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~-W~~ 280 (457)
.++.+++.|+.. ..+.+||..++.|..+..+...... .+++.. ++..++.|+.+ ..+.+||..++. |..
T Consensus 21 ~~g~~l~~~~~d--~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d------~~v~vwd~~~~~~~~~ 92 (377)
T 3dwl_C 21 SQRTEFVTTTAT--NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD------RNAYVYEKRPDGTWKQ 92 (377)
T ss_dssp SSSSEEECCCSS--SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT------SSEEEC------CCCC
T ss_pred CCCCEEEEecCC--CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC------CeEEEEEcCCCCceee
Confidence 355566666543 3577888888888777665432222 222222 55666666643 357888888776 433
Q ss_pred CCCCCCCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCc-eEEcCCCCCCCCCCCCCCCCCCCCEEEEE--C
Q 012755 281 LPDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRT-WKRIENMYPSNVGTQSNPAMSSPPLVAVV--N 355 (457)
Q Consensus 281 ~~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~-W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~ 355 (457)
...+.........+.+ ++++.+.|+.+ ..+..||..+.+ |..+..+.. + .......+.. +
T Consensus 93 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~--------~-h~~~v~~~~~~~~ 157 (377)
T 3dwl_C 93 TLVLLRLNRAATFVRWSPNEDKFAVGSGA------RVISVCYFEQENDWWVSKHLKR--------P-LRSTILSLDWHPN 157 (377)
T ss_dssp EEECCCCSSCEEEEECCTTSSCCEEEESS------SCEEECCC-----CCCCEEECS--------S-CCSCEEEEEECTT
T ss_pred eeEecccCCceEEEEECCCCCEEEEEecC------CeEEEEEECCcccceeeeEeec--------c-cCCCeEEEEEcCC
Confidence 3222221112222222 55666666543 346778887764 332222211 0 1111122222 5
Q ss_pred CEEEEEecCCCeEEEEECCCC
Q 012755 356 NQLYSADQATNVVKKYNKTNN 376 (457)
Q Consensus 356 g~ly~~gg~~~~v~~Yd~~~~ 376 (457)
+++++.|+..+.+..||..+.
T Consensus 158 ~~~l~~~~~d~~i~iwd~~~~ 178 (377)
T 3dwl_C 158 NVLLAAGCADRKAYVLSAYVR 178 (377)
T ss_dssp SSEEEEEESSSCEEEEEECCS
T ss_pred CCEEEEEeCCCEEEEEEEEec
Confidence 677777877788999998643
No 118
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.91 E-value=0.86 Score=42.62 Aligned_cols=150 Identities=11% Similarity=-0.011 Sum_probs=74.1
Q ss_pred ccEEEEEecCccEEEEeCCCCcE-EeCCCCCCCccccCCCeeeEEeC----CEEEEEceecCCcEEEEEECCCCcEEe-C
Q 012755 160 EHWVYLACILMPWEAFDPLRQRW-MRLPRMQCDECFTSADKESLAVG----TQLLVFGRELSGFAIWMYSLIANCWSK-C 233 (457)
Q Consensus 160 ~~~l~~~~~~~~~~~ydp~~~~W-~~l~~~p~~~~~~~~~~~~~~~~----~~lyv~GG~~~~~~v~~yd~~t~~W~~-l 233 (457)
+..+++.++...+..||..+... ..+.....+.............+ +.+++.|+.. ..+.+||..+++-.. +
T Consensus 34 ~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d--g~i~v~d~~~~~~~~~~ 111 (366)
T 3k26_A 34 DPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR--GIIRIINPITMQCIKHY 111 (366)
T ss_dssp SCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT--CEEEEECTTTCCEEEEE
T ss_pred CceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC--CEEEEEEchhceEeeee
Confidence 34456655566788888875532 22221111100000101122334 5677777643 368899988765322 2
Q ss_pred CCCCCCccceeEEee--CCEEEEEeeecCCCCccceEEEEeCCCCcEEEC-CCCCCCCcceeEEEE--CCEEEEEeccCC
Q 012755 234 PQMNLPRCLFGSSSL--GEVAIVAGGTDKNGCILKSAELYNSELGTWETL-PDMNLPRKLCSGFFM--DGKFYIIGGMSS 308 (457)
Q Consensus 234 ~~lp~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~-~~~p~~r~~~~~~~~--~g~iyv~GG~~~ 308 (457)
... ...-.+++.. ++.+++.|+.+ ..+.+||..+++-... ..+.........+.+ ++...+.|+.+
T Consensus 112 ~~~--~~~i~~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d- 182 (366)
T 3k26_A 112 VGH--GNAINELKFHPRDPNLLLSVSKD------HALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD- 182 (366)
T ss_dssp ESC--CSCEEEEEECSSCTTEEEEEETT------SCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT-
T ss_pred cCC--CCcEEEEEECCCCCCEEEEEeCC------CeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCC-
Confidence 111 1111222222 56677777653 4688999988764332 221222222222222 45566666543
Q ss_pred CCCCCceEEEEECCCCc
Q 012755 309 PTDPLTCGEEYNLETRT 325 (457)
Q Consensus 309 ~~~~~~~~~~yd~~t~~ 325 (457)
..+..||+.+.+
T Consensus 183 -----g~i~i~d~~~~~ 194 (366)
T 3k26_A 183 -----HSLKLWRINSKR 194 (366)
T ss_dssp -----SCEEEEESCSHH
T ss_pred -----CCEEEEECCCCc
Confidence 357888887653
No 119
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=95.88 E-value=0.00095 Score=62.02 Aligned_cols=44 Identities=25% Similarity=0.294 Sum_probs=40.7
Q ss_pred CCCCcHHHHhhhceeccccccCcccccChhhhhhhccCcchhhh
Q 012755 110 LPGLHDDATLDILAWSSRSDYPTLSCLNRKFKSLIASGYLYKLR 153 (457)
Q Consensus 110 ~~~LPddl~~~iLarlp~~~~~~l~~v~k~w~~li~s~~~~~~r 153 (457)
+..||+||++.||+.|+.++++++..|||+|+.+..++.+++..
T Consensus 5 l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~ 48 (312)
T 3l2o_B 5 LTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYF 48 (312)
T ss_dssp HHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHH
T ss_pred hHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHH
Confidence 55799999999999999999999999999999999999988753
No 120
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.88 E-value=0.52 Score=44.02 Aligned_cols=243 Identities=12% Similarity=0.022 Sum_probs=119.5
Q ss_pred ccEEEEEec-CccEEEEeCCCCcEEeCCCCCCCccccCCCeeeE-EeCCEEEEEceec--CCcEEEEEECCCCcEEe-CC
Q 012755 160 EHWVYLACI-LMPWEAFDPLRQRWMRLPRMQCDECFTSADKESL-AVGTQLLVFGREL--SGFAIWMYSLIANCWSK-CP 234 (457)
Q Consensus 160 ~~~l~~~~~-~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~-~~~~~lyv~GG~~--~~~~v~~yd~~t~~W~~-l~ 234 (457)
++.+|+... ...++.||+.+.+...+...+... . ..++ ..++.+|+..... ....+++||+.++..+. +.
T Consensus 55 ~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~----~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~ 129 (333)
T 2dg1_A 55 QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKAN-P----AAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIE 129 (333)
T ss_dssp TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSS-E----EEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEEC
T ss_pred CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCC-c----ceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEc
Confidence 345676543 457899999888776543111110 0 1122 2366787764321 12479999999887653 22
Q ss_pred CCCCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE-CC-EEEEEeccCCCCC
Q 012755 235 QMNLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM-DG-KFYIIGGMSSPTD 311 (457)
Q Consensus 235 ~lp~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g-~iyv~GG~~~~~~ 311 (457)
..........++. -++.+|+.............++++|+.+++...+..- .......+.. +| .+|+....
T Consensus 130 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~~~dg~~l~v~~~~----- 202 (333)
T 2dg1_A 130 DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--ISVANGIALSTDEKVLWVTETT----- 202 (333)
T ss_dssp SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ESSEEEEEECTTSSEEEEEEGG-----
T ss_pred cCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--CCcccceEECCCCCEEEEEeCC-----
Confidence 2111111122222 2678887643211112235789999988776554210 0011122222 44 58876432
Q ss_pred CCceEEEEECCCC--ceEEcC-----CCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEec
Q 012755 312 PLTCGEEYNLETR--TWKRIE-----NMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSWTVVK 382 (457)
Q Consensus 312 ~~~~~~~yd~~t~--~W~~~~-----~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~~v~ 382 (457)
...+.+||+.++ ....+. .... . ..+..+.+ +|.||+.....+.|.+||++...-..+.
T Consensus 203 -~~~i~~~d~~~~g~~~~~~~~~~~~~~~~----------~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~~~~~~ 270 (333)
T 2dg1_A 203 -ANRLHRIALEDDGVTIQPFGATIPYYFTG----------H-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQIL 270 (333)
T ss_dssp -GTEEEEEEECTTSSSEEEEEEEEEEECCS----------S-SEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEEE
T ss_pred -CCeEEEEEecCCCcCcccccceEEEecCC----------C-CCCCceEECCCCCEEEEEcCCCEEEEECCCCCEEEEEE
Confidence 246788998642 333221 1100 0 11122233 6788888755678999999655444442
Q ss_pred cCCCccCC--CCcceEEEEEeC-CEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 383 RLPVRANS--FNGWGLAFKACG-NSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 383 ~~p~~~~~--~~~~~~~~~~~~-g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
.+..... ..-.++++ .-+ +.||+.+.... ......++.++....
T Consensus 271 -~~~~~~g~~~~~~~~~~-~~dg~~L~v~~~~g~-~~~~~~l~~~~~~~~ 317 (333)
T 2dg1_A 271 -IPGRDEGHMLRSTHPQF-IPGTNQLIICSNDIE-MGGGSMLYTVNGFAK 317 (333)
T ss_dssp -CTTGGGTCSCBCCEEEE-CTTSCEEEEEEECGG-GTCCEEEEEEECSSC
T ss_pred -cCCCccccccCcceEEE-CCCCCEEEEEeCccC-CCCCceEEEEecccC
Confidence 2221000 00112222 224 47887654321 112346777777653
No 121
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=95.88 E-value=1.2 Score=41.84 Aligned_cols=223 Identities=6% Similarity=-0.074 Sum_probs=110.5
Q ss_pred cEEEEeCCCCcEEeCCCCCCCccccCCCeeeE-EeCCEEEEEceecCCcEEEEEECCCC--cEEeCCCC------CCCc-
Q 012755 171 PWEAFDPLRQRWMRLPRMQCDECFTSADKESL-AVGTQLLVFGRELSGFAIWMYSLIAN--CWSKCPQM------NLPR- 240 (457)
Q Consensus 171 ~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~-~~~~~lyv~GG~~~~~~v~~yd~~t~--~W~~l~~l------p~~r- 240 (457)
.+..+|+.+.+......... ......++ ..++.||+... ....+.+||+..+ .-..+... ....
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~----~~~p~gia~d~~g~l~v~d~--~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~ 143 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNL----FYLPHGLSIDTDGNYWVTDV--ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFC 143 (329)
T ss_dssp CEEEECTTTCCEEEEECTTT----CSSEEEEEECTTSCEEEEET--TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCS
T ss_pred cEEEEECCCCeEEeccCCCc----cCCceEEEECCCCCEEEEEC--CCCEEEEEeCCCCeEEEEEecccCCCCCCccccC
Confidence 57778887665433211000 00011122 23677888653 2457999998755 22222110 0011
Q ss_pred cceeEEee--CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCC-------CCCCcce-eEEEE-C-CEEEEEeccCC
Q 012755 241 CLFGSSSL--GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDM-------NLPRKLC-SGFFM-D-GKFYIIGGMSS 308 (457)
Q Consensus 241 ~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~-------p~~r~~~-~~~~~-~-g~iyv~GG~~~ 308 (457)
.-.++++- ++.|||..++. ...+.+||+....-..+... +...... .+++- + +.|||....
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~-----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~-- 216 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYC-----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE-- 216 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSS-----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT--
T ss_pred CCcEEEEeCCCCeEEEEeCCC-----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC--
Confidence 11233443 68999987521 25788999654443333211 1111122 33333 4 899998532
Q ss_pred CCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEec-------CCCeEEEEECCCCcEEEe
Q 012755 309 PTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQ-------ATNVVKKYNKTNNSWTVV 381 (457)
Q Consensus 309 ~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg-------~~~~v~~Yd~~~~~W~~v 381 (457)
...+.+||+.+++....-..+.. ......++...+.+|...| ....+..||..+++....
T Consensus 217 ----~~~I~~~~~~~G~~~~~~~~~~~---------~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~ 283 (329)
T 3fvz_A 217 ----NGRIQCFKTDTKEFVREIKHASF---------GRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDV 283 (329)
T ss_dssp ----TTEEEEEETTTCCEEEEECCTTT---------TTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEE
T ss_pred ----CCEEEEEECCCCcEEEEEecccc---------CCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEE
Confidence 35789999987766543221110 1111122333355555543 345899999888765543
Q ss_pred c-cCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 382 K-RLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 382 ~-~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
- ..+..... -.+++ +.-+|.|||....++ .|..|+++.
T Consensus 284 ~~~~~~~~~~--p~~ia-~~~dG~lyvad~~~~------~I~~~~~~~ 322 (329)
T 3fvz_A 284 FKPVRKHFDM--PHDIV-ASEDGTVYIGDAHTN------TVWKFTLTE 322 (329)
T ss_dssp ECCSSSCCSS--EEEEE-ECTTSEEEEEESSSC------CEEEEEEEE
T ss_pred EcCCCCccCC--eeEEE-ECCCCCEEEEECCCC------EEEEEeCCc
Confidence 2 11111110 11222 234679999875432 477777653
No 122
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=95.86 E-value=0.92 Score=43.70 Aligned_cols=193 Identities=8% Similarity=0.019 Sum_probs=95.5
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEe-----CCCCC-CCccceeEEee-CC-EEEEEeeecCCCCccceEEEEeCCCC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSK-----CPQMN-LPRCLFGSSSL-GE-VAIVAGGTDKNGCILKSAELYNSELG 276 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~-----l~~lp-~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~v~~yd~~t~ 276 (457)
++.+++.|+.+ ..+.+||..++.... +..+. ....-.+++.. ++ .+++.|+.+ ..+.++|..++
T Consensus 93 ~~~~l~s~s~d--g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d------g~i~iwd~~~~ 164 (402)
T 2aq5_A 93 NDNVIASGSED--CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD------NVILVWDVGTG 164 (402)
T ss_dssp CTTEEEEEETT--SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT------SCEEEEETTTT
T ss_pred CCCEEEEEeCC--CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC------CEEEEEECCCC
Confidence 56677777643 468889988764421 11111 11111122222 33 567777644 35889999888
Q ss_pred cEEECCCCCCCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcC-CCCCCCCCCCCCCCCCCCCEEEE
Q 012755 277 TWETLPDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIE-NMYPSNVGTQSNPAMSSPPLVAV 353 (457)
Q Consensus 277 ~W~~~~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~-~~~~~~~~~~~~~~~r~~~~~~~ 353 (457)
+....-...........+.+ ++.+++.|+.+ ..+.+||+.+.+-...- .... ..........
T Consensus 165 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~---------~~~~~~~~~~ 229 (402)
T 2aq5_A 165 AAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD------KRVRVIEPRKGTVVAEKDRPHE---------GTRPVHAVFV 229 (402)
T ss_dssp EEEEEECTTTCCSCEEEEEECTTSSCEEEEETT------SEEEEEETTTTEEEEEEECSSC---------SSSCCEEEEC
T ss_pred CccEEEecCCCCCceEEEEECCCCCEEEEEecC------CcEEEEeCCCCceeeeeccCCC---------CCcceEEEEc
Confidence 75432110111111222222 56666666532 46889999886543221 1111 0111112222
Q ss_pred ECCEEEEEe---cCCCeEEEEECCCCcE-EEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 354 VNNQLYSAD---QATNVVKKYNKTNNSW-TVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 354 ~~g~ly~~g---g~~~~v~~Yd~~~~~W-~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
-++++++.| ...+.+..||..+..- .....+..... -..++....+..|++.|+.++ .+.+||..++
T Consensus 230 ~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---v~~~~~s~~~~~l~~~g~~dg------~i~i~d~~~~ 300 (402)
T 2aq5_A 230 SEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSG---VLLPFFDPDTNIVYLCGKGDS------SIRYFEITSE 300 (402)
T ss_dssp STTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSS---CEEEEEETTTTEEEEEETTCS------CEEEEEECSS
T ss_pred CCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCc---eeEEEEcCCCCEEEEEEcCCC------eEEEEEecCC
Confidence 378888887 5677899999986431 01111111110 111222122445666775543 4777777764
No 123
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.83 E-value=0.9 Score=41.83 Aligned_cols=189 Identities=8% Similarity=0.091 Sum_probs=91.9
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCC-CCccceeEEee---CCEEEEEeeecCCCCccceEEEEeCCCCcEEE
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMN-LPRCLFGSSSL---GEVAIVAGGTDKNGCILKSAELYNSELGTWET 280 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp-~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~ 280 (457)
++..++.|+.+. .+.+||..+.+.+.+..+. ....-.+++.. ++.+++.|+.+ ..+.++|..++.|..
T Consensus 20 ~g~~las~s~D~--~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D------~~v~iWd~~~~~~~~ 91 (297)
T 2pm7_B 20 YGKRMATCSSDK--TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD------GKVMIWKEENGRWSQ 91 (297)
T ss_dssp TSSEEEEEETTS--CEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT------TEEEEEEBSSSCBCC
T ss_pred CCCEEEEEeCCC--EEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC------CEEEEEEcCCCceEE
Confidence 455666666433 5777887654332222221 11111222221 25666777644 468889998887755
Q ss_pred CCCCCCCCcceeEEEE--C--CEEEEEeccCCCCCCCceEEEEECCCCc-eEEcCCCCCCCCCCCCCCCCCCCCEEEE--
Q 012755 281 LPDMNLPRKLCSGFFM--D--GKFYIIGGMSSPTDPLTCGEEYNLETRT-WKRIENMYPSNVGTQSNPAMSSPPLVAV-- 353 (457)
Q Consensus 281 ~~~~p~~r~~~~~~~~--~--g~iyv~GG~~~~~~~~~~~~~yd~~t~~-W~~~~~~~~~~~~~~~~~~~r~~~~~~~-- 353 (457)
+..+.........+.. + +.+.+.|+.+ ..+..||..+.. +... .... .......+.
T Consensus 92 ~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d------~~v~~wd~~~~~~~~~~-~~~~----------h~~~v~~~~~~ 154 (297)
T 2pm7_B 92 IAVHAVHSASVNSVQWAPHEYGPMLLVASSD------GKVSVVEFKENGTTSPI-IIDA----------HAIGVNSASWA 154 (297)
T ss_dssp CEEECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEEBCSSSCBCCE-EEEC----------CSSCEEEEEEC
T ss_pred EEEeecCCCceeEEEeCcCCCCcEEEEEECC------CcEEEEEecCCCceeee-eeec----------ccCccceEeec
Confidence 4322221122222322 1 4555665543 356778877652 2110 0000 000001111
Q ss_pred -------------ECCEEEEEecCCCeEEEEECCCC--cEEEeccCCCccCCCCcceEEEEEe-C---CEEEEEcCcCCC
Q 012755 354 -------------VNNQLYSADQATNVVKKYNKTNN--SWTVVKRLPVRANSFNGWGLAFKAC-G---NSLLVIGGHREL 414 (457)
Q Consensus 354 -------------~~g~ly~~gg~~~~v~~Yd~~~~--~W~~v~~~p~~~~~~~~~~~~~~~~-~---g~lyv~GG~~~~ 414 (457)
.++++++.|+..+.|..||..+. .|..+..+.... ..-..+.-. + +.+++.|+.++
T Consensus 155 p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~----~~V~~v~~sp~~~~~~~las~s~D~- 229 (297)
T 2pm7_B 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS----DWVRDVAWSPTVLLRSYMASVSQDR- 229 (297)
T ss_dssp CCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS----SCEEEEEECCCCSSSEEEEEEETTS-
T ss_pred CCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCC----CceEEEEECCCCCCceEEEEEECCC-
Confidence 12457777877888988987654 365554443222 111122221 2 47777777664
Q ss_pred CCceEEEEEeeCCC
Q 012755 415 QGEIIVLHSWDPTD 428 (457)
Q Consensus 415 ~~~~~~v~~y~~~~ 428 (457)
.+.+||.+.
T Consensus 230 -----~v~iWd~~~ 238 (297)
T 2pm7_B 230 -----TCIIWTQDN 238 (297)
T ss_dssp -----CEEEEEESS
T ss_pred -----cEEEEEeCC
Confidence 477787765
No 124
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.82 E-value=0.98 Score=43.04 Aligned_cols=120 Identities=10% Similarity=-0.009 Sum_probs=57.5
Q ss_pred CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCC-CCC---CcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECC
Q 012755 249 GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDM-NLP---RKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLE 322 (457)
Q Consensus 249 ~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~-p~~---r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~ 322 (457)
++ +++.|+.+ ..+.+||..+.+-...-.. ... ......+.+ ++++++.|+.++ ....+.+||..
T Consensus 197 ~~-~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~---~~g~i~i~d~~ 266 (397)
T 1sq9_A 197 RG-LIATGFNN------GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN---SFGCITLYETE 266 (397)
T ss_dssp TS-EEEEECTT------SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET---TEEEEEEEETT
T ss_pred Cc-eEEEEeCC------CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC---CCceEEEEECC
Confidence 45 55555532 4688999988764322111 000 111222222 566666665431 11468889988
Q ss_pred CCceEE-cCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcE
Q 012755 323 TRTWKR-IENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSW 378 (457)
Q Consensus 323 t~~W~~-~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W 378 (457)
+.+-.. +.....+................+.. ++++++.++..+.|..||..+.+-
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 267 FGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER 325 (397)
T ss_dssp TCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred CCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCce
Confidence 765322 21100000000000001111122233 577777787888999999987643
No 125
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=95.81 E-value=1.1 Score=46.55 Aligned_cols=192 Identities=9% Similarity=-0.072 Sum_probs=99.1
Q ss_pred cEEEEEECCC------CcEEeCC-CCCCCccceeEEeeCCEEEEEeeecCCCC--ccceEEEEeCC-CC---cEEECCCC
Q 012755 218 FAIWMYSLIA------NCWSKCP-QMNLPRCLFGSSSLGEVAIVAGGTDKNGC--ILKSAELYNSE-LG---TWETLPDM 284 (457)
Q Consensus 218 ~~v~~yd~~t------~~W~~l~-~lp~~r~~~~~~~~~~~iyv~GG~~~~~~--~~~~v~~yd~~-t~---~W~~~~~~ 284 (457)
..++++|..+ ++-+.+. .-+ .........-+++..++...+.... ....++++|.. ++ ..+.+..-
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~ 239 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAH-RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG 239 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCS-SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred eEEEEEECCCCccccCCceeEEEecCC-CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC
Confidence 5799999988 6666654 211 1111111223555444444332111 13579999998 56 44444221
Q ss_pred CCCCcceeEE-EECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCC-CCEEEEE-CCEEEEE
Q 012755 285 NLPRKLCSGF-FMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSS-PPLVAVV-NNQLYSA 361 (457)
Q Consensus 285 p~~r~~~~~~-~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~-~~~~~~~-~g~ly~~ 361 (457)
. .......+ .-+|++|+.+..++ ...++.+|+.++++..+...... ...+.... ...++.. ++++++.
T Consensus 240 ~-~~~~~~~~~spdg~l~~~~~~~~----~~~l~~~~~~~~~~~~l~~~~~~----~~~p~w~~~~~~~~~~~~~~~~~~ 310 (662)
T 3azo_A 240 P-EEAIAQAEWAPDGSLIVATDRTG----WWNLHRVDPATGAATQLCRREEE----FAGPLWTPGMRWFAPLANGLIAVV 310 (662)
T ss_dssp T-TBCEEEEEECTTSCEEEEECTTS----SCEEEEECTTTCCEEESSCCSSB----SSCCCCSTTCCSEEECTTSCEEEE
T ss_pred C-CceEcceEECCCCeEEEEECCCC----CeEEEEEECCCCceeeccccccc----ccCccccccCceEeEeCCCEEEEE
Confidence 1 11111222 22788777765432 24689999989999887653220 00011110 1123333 6777777
Q ss_pred ecC-CCeEEEEECCCCcEEEeccCCCccCCCCcceEEE-EEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 362 DQA-TNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAF-KACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 362 gg~-~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~-~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
+.. ...++.+|.+++..+.+..- . .....+ ...++.+++..+... ....++.+|.+++
T Consensus 311 ~~~~~~~l~~~d~~~~~~~~l~~~---~----~~~~~~~s~~~~~~~~~~~~~~---~~~~i~~~d~~~g 370 (662)
T 3azo_A 311 HGKGAAVLGILDPESGELVDAAGP---W----TEWAATLTVSGTRAVGVAASPR---TAYEVVELDTVTG 370 (662)
T ss_dssp EBSSSCEEEEEETTTTEEEECCSS---C----CEEEEEEEEETTEEEEEEEETT---EEEEEEEEETTTC
T ss_pred EEcCccEEEEEECCCCcEEEecCC---C----CeEEEEEecCCCEEEEEEcCCC---CCCEEEEEECCCC
Confidence 654 33567779888877666422 1 111122 344666666654432 2346888887664
No 126
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.76 E-value=0.57 Score=43.49 Aligned_cols=148 Identities=14% Similarity=0.091 Sum_probs=71.9
Q ss_pred EEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEE-ECCEEEEEeccCCCCCCCceEEEEECCCCceEEc
Q 012755 251 VAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFF-MDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRI 329 (457)
Q Consensus 251 ~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~ 329 (457)
.+++.|+.+ ..+.+||..+.+-...-.... ..-.+++. -++++.+.|+.+ ..+..||..+..-..
T Consensus 186 ~~~~s~~~d------~~i~i~d~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~s~D------g~i~iwd~~~~~~~~- 251 (340)
T 4aow_A 186 PIIVSCGWD------KLVKVWNLANCKLKTNHIGHT-GYLNTVTVSPDGSLCASGGKD------GQAMLWDLNEGKHLY- 251 (340)
T ss_dssp CEEEEEETT------SCEEEEETTTTEEEEEECCCS-SCEEEEEECTTSSEEEEEETT------CEEEEEETTTTEEEE-
T ss_pred cEEEEEcCC------CEEEEEECCCCceeeEecCCC-CcEEEEEECCCCCEEEEEeCC------CeEEEEEeccCceee-
Confidence 455555543 357888988876533211111 11112222 256677776643 357788887654322
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCcEEEe-ccCC--CccCCCCcceEEEE-EeCCEE
Q 012755 330 ENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQATNVVKKYNKTNNSWTVV-KRLP--VRANSFNGWGLAFK-ACGNSL 405 (457)
Q Consensus 330 ~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~~W~~v-~~~p--~~~~~~~~~~~~~~-~~~g~l 405 (457)
.+.. ......++...+..++.++..+.+..||.++..-... .... .....+...-..++ ..+++.
T Consensus 252 -~~~~----------~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~ 320 (340)
T 4aow_A 252 -TLDG----------GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQT 320 (340)
T ss_dssp -EEEC----------SSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSE
T ss_pred -eecC----------CceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCE
Confidence 1111 1111122223344445555677899999887653221 1110 00111111111121 236777
Q ss_pred EEEcCcCCCCCceEEEEEeeCCCC
Q 012755 406 LVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 406 yv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
++.||.++ .|.+||.+++
T Consensus 321 l~sgs~Dg------~v~iW~~~tG 338 (340)
T 4aow_A 321 LFAGYTDN------LVRVWQVTIG 338 (340)
T ss_dssp EEEEETTS------CEEEEEEEC-
T ss_pred EEEEeCCC------EEEEEeCCCc
Confidence 78887764 4888998774
No 127
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.76 E-value=0.56 Score=45.08 Aligned_cols=148 Identities=10% Similarity=-0.052 Sum_probs=75.5
Q ss_pred CEEEEEceecCCcEEEEEECCCCcEEeCCCCCC-----CccceeEEee--CCEEEEEeeecCCCCccceEEEEeCCCCcE
Q 012755 206 TQLLVFGRELSGFAIWMYSLIANCWSKCPQMNL-----PRCLFGSSSL--GEVAIVAGGTDKNGCILKSAELYNSELGTW 278 (457)
Q Consensus 206 ~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~-----~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W 278 (457)
+.+++.|+.. ..+.+||..+++-...-..+. ...-.+++.. +..+++.|+.++. ...+.+||..+..-
T Consensus 178 ~~~l~~~~~d--g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~---~~~i~~~d~~~~~~ 252 (416)
T 2pm9_A 178 AHVFASAGSS--NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN---DPSILIWDLRNANT 252 (416)
T ss_dssp TTEEEEESSS--SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS---SCCCCEEETTSTTS
T ss_pred CcEEEEEcCC--CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC---CceEEEEeCCCCCC
Confidence 4566666543 358999998876543322221 1111222222 2357777765431 13677889877531
Q ss_pred EECCCCC-CCCcceeEEEE---CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE
Q 012755 279 ETLPDMN-LPRKLCSGFFM---DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV 354 (457)
Q Consensus 279 ~~~~~~p-~~r~~~~~~~~---~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 354 (457)
.+..+. ........+.+ ++.+++.|+.+ ..+..||+.+.+-...-.... .. ...++..
T Consensus 253 -~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d------g~v~~wd~~~~~~~~~~~~~~----------~~-v~~~~~s 314 (416)
T 2pm9_A 253 -PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD------NTVLLWNPESAEQLSQFPARG----------NW-CFKTKFA 314 (416)
T ss_dssp -CSBCCCSCCSSCEEEEEECSSCSSCEEEEESS------SEEEEECSSSCCEEEEEECSS----------SC-CCCEEEC
T ss_pred -CcEEeecCccCceeEEEeCCCCCCeEEEEeCC------CCEEEeeCCCCccceeecCCC----------Cc-eEEEEEC
Confidence 111122 11112222222 56677766643 357889988765322111111 11 1122222
Q ss_pred -CC-EEEEEecCCCeEEEEECCCC
Q 012755 355 -NN-QLYSADQATNVVKKYNKTNN 376 (457)
Q Consensus 355 -~g-~ly~~gg~~~~v~~Yd~~~~ 376 (457)
++ .+++.++..+.+..||..+.
T Consensus 315 ~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 315 PEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp TTCTTEEEECCSSSEEEEEESCCC
T ss_pred CCCCCEEEEEecCCcEEEEEccCC
Confidence 44 67778877888999998764
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.72 E-value=0.5 Score=46.24 Aligned_cols=185 Identities=6% Similarity=-0.033 Sum_probs=99.1
Q ss_pred ccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCE-EEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEe-
Q 012755 170 MPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQ-LLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSS- 247 (457)
Q Consensus 170 ~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~-lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~- 247 (457)
..++.+|..+.+...+...+... . ......++. |++.+.......++++|..+++...+...+.. ....+.
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~~~--~---~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~--~~~~~~s 275 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPRHN--G---APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSN--NTEPTWF 275 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSSCE--E---EEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSC--EEEEEEC
T ss_pred cEEEEEECCCCcEEEeecCCCcc--c---CEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCc--ccceEEC
Confidence 47889999887766554322110 0 011223444 55455444456799999999888776543221 111221
Q ss_pred eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEE-EECCEEEEEeccCCCCCCCceEEEEECCCCce
Q 012755 248 LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGF-FMDGKFYIIGGMSSPTDPLTCGEEYNLETRTW 326 (457)
Q Consensus 248 ~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~-~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W 326 (457)
-+++.+++++..+. ...++++|..++.-..+.... ......+ .-+|+..++++... ....+..+|+.+++.
T Consensus 276 pdg~~l~~~s~~~g---~~~i~~~d~~~~~~~~l~~~~--~~~~~~~~spdG~~l~~~~~~~---g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 276 PDSQNLAFTSDQAG---RPQVYKVNINGGAPQRITWEG--SQNQDADVSSDGKFMVMVSSNG---GQQHIAKQDLATGGV 347 (415)
T ss_dssp TTSSEEEEEECTTS---SCEEEEEETTSSCCEECCCSS--SEEEEEEECTTSSEEEEEEECS---SCEEEEEEETTTCCE
T ss_pred CCCCEEEEEECCCC---CcEEEEEECCCCCEEEEecCC--CcccCeEECCCCCEEEEEECcC---CceEEEEEECCCCCE
Confidence 24554444442211 357899999888755543211 1111222 22565544444322 135789999999888
Q ss_pred EEcCCCCCCCCCCCCCCCCCCCCEEE-EECCEEEEEecCCC---eEEEEECCCCcEEEec
Q 012755 327 KRIENMYPSNVGTQSNPAMSSPPLVA-VVNNQLYSADQATN---VVKKYNKTNNSWTVVK 382 (457)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~g~ly~~gg~~~---~v~~Yd~~~~~W~~v~ 382 (457)
..+.... ....++ .-+|+.+++++..+ .++.+|.+++.-+.+.
T Consensus 348 ~~l~~~~-------------~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~ 394 (415)
T 2hqs_A 348 QVLSSTF-------------LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLP 394 (415)
T ss_dssp EECCCSS-------------SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECC
T ss_pred EEecCCC-------------CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEee
Confidence 7654311 111122 22566555543323 7899998877766654
No 129
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=95.71 E-value=0.0025 Score=60.94 Aligned_cols=44 Identities=16% Similarity=0.221 Sum_probs=39.0
Q ss_pred CCCCCCCcHHHHhhhceeccccccCcccccChhhhhhhccCcch
Q 012755 107 DSFLPGLHDDATLDILAWSSRSDYPTLSCLNRKFKSLIASGYLY 150 (457)
Q Consensus 107 ~~~~~~LPddl~~~iLarlp~~~~~~l~~v~k~w~~li~s~~~~ 150 (457)
...|..||||++..|+++|+..++.+++.|||+|+.++.++.++
T Consensus 6 ~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~~ 49 (336)
T 2ast_B 6 GVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 49 (336)
T ss_dssp -CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTTS
T ss_pred cCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchhh
Confidence 45588999999999999999999999999999999999877644
No 130
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.71 E-value=0.12 Score=48.77 Aligned_cols=193 Identities=12% Similarity=0.134 Sum_probs=92.5
Q ss_pred CCEEEEEceecCCcEEEEEECCC--CcEEeCCCCCCCcc-ceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEE
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIA--NCWSKCPQMNLPRC-LFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWET 280 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t--~~W~~l~~lp~~r~-~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~ 280 (457)
++..++.|+.+ ..+.+||... ..++.+..+..... -.+++. -++.+++.|+.+ ..+.++|..++.|+.
T Consensus 118 ~g~~las~s~D--~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D------~~i~iW~~~~~~~~~ 189 (330)
T 2hes_X 118 DGYYLATCSRD--KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD------DTVRIWKDYDDDWEC 189 (330)
T ss_dssp TSCEEEEEETT--SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT------SCEEEEEEETTEEEE
T ss_pred CCCEEEEEeCC--CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC------CeEEEEECCCCCeeE
Confidence 56666666643 3577888742 23332221111111 111221 256667777654 357778877777765
Q ss_pred CCCCCCCCcceeEEEE--C--CEEEEEeccCCCCCCCceEEEEECCCC------ceEEcCCCCCCCCCCCCCCCCCCCCE
Q 012755 281 LPDMNLPRKLCSGFFM--D--GKFYIIGGMSSPTDPLTCGEEYNLETR------TWKRIENMYPSNVGTQSNPAMSSPPL 350 (457)
Q Consensus 281 ~~~~p~~r~~~~~~~~--~--g~iyv~GG~~~~~~~~~~~~~yd~~t~------~W~~~~~~~~~~~~~~~~~~~r~~~~ 350 (457)
+..+.........+.. + +...+.|+.+ ..+..||..+. .|.....++. ........
T Consensus 190 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D------~~v~iw~~~~~~~~~~~~~~~~~~~~~--------~h~~~v~~ 255 (330)
T 2hes_X 190 VAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD------STVRVWKYMGDDEDDQQEWVCEAILPD--------VHKRQVYN 255 (330)
T ss_dssp EEEECCCSSCEEEEEECCSSSSCEEEEEETT------SCEEEEEEEEECTTSCEEEEEEEECCS--------CCSSCEEE
T ss_pred EEEccCCCCcEEEEEecCCCCeeEEEEEeCC------CeEEEEEecCCCccccceeEEeeeccc--------ccccceEE
Confidence 5433322221112222 2 3344455433 23555665432 3544433221 00111112
Q ss_pred EEEECCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEe----CCEEEEEcCcCCCCCceEEEEEeeC
Q 012755 351 VAVVNNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKAC----GNSLLVIGGHRELQGEIIVLHSWDP 426 (457)
Q Consensus 351 ~~~~~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~----~g~lyv~GG~~~~~~~~~~v~~y~~ 426 (457)
++...+.+++.++..+.|..||..++.|+.+........ ...+..+.. ++++++.||.++ .+.+|+.
T Consensus 256 v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~---~~~v~~v~~~~~~~~~~las~s~Dg------~v~~W~~ 326 (330)
T 2hes_X 256 VAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRALCHG---VYEINVVKWLELNGKTILATGGDDG------IVNFWSL 326 (330)
T ss_dssp EEECTTSCEEEEETTSCEEEEEEETTEEEEEEEESCTTT---TSCEEEEEEC-----CCEEEEETTS------EEEEEEC
T ss_pred EEEcCCCEEEEEeCCCEEEEEEcCCCceEEEeccccccc---cceEEEEEEecCCCceEEEEecCCC------cEEEEEe
Confidence 222244466667778899999999888976643221111 101222221 467888888764 5788887
Q ss_pred CC
Q 012755 427 TD 428 (457)
Q Consensus 427 ~~ 428 (457)
+.
T Consensus 327 ~~ 328 (330)
T 2hes_X 327 EK 328 (330)
T ss_dssp --
T ss_pred cc
Confidence 54
No 131
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.69 E-value=0.33 Score=46.62 Aligned_cols=186 Identities=10% Similarity=0.036 Sum_probs=90.0
Q ss_pred ccEEEEEecCccEEEEeCCCCcEEeCCCCCCCccc-----------cCCCeeeEEeCCEEEEEceecCCcEEEEEECCCC
Q 012755 160 EHWVYLACILMPWEAFDPLRQRWMRLPRMQCDECF-----------TSADKESLAVGTQLLVFGRELSGFAIWMYSLIAN 228 (457)
Q Consensus 160 ~~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~-----------~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~ 228 (457)
...++..+....+..||..+.+....-..+..... ..........++. ++.|+.. ..+.+||..++
T Consensus 161 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--g~i~~~d~~~~ 237 (425)
T 1r5m_A 161 GTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPGPK--GAIFVYQITEK 237 (425)
T ss_dssp SSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTE-EEEECGG--GCEEEEETTCS
T ss_pred CCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEEEcCC--CeEEEEEcCCC
Confidence 34455555567788889877654322111111100 0010112334555 4444432 36889998875
Q ss_pred cEEe-CCCCCCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEE-CCCCCCCCcceeEEEE-CCEEEEEe
Q 012755 229 CWSK-CPQMNLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWET-LPDMNLPRKLCSGFFM-DGKFYIIG 304 (457)
Q Consensus 229 ~W~~-l~~lp~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~-~~~~p~~r~~~~~~~~-~g~iyv~G 304 (457)
+-.. +.. ....-.+++. -++..++.|+.+ ..+.+||..+.+-.. +.. ....-..++.. ++ +++.+
T Consensus 238 ~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~-~l~~~ 306 (425)
T 1r5m_A 238 TPTGKLIG--HHGPISVLEFNDTNKLLLSASDD------GTLRIWHGGNGNSQNCFYG--HSQSIVSASWVGDD-KVISC 306 (425)
T ss_dssp SCSEEECC--CSSCEEEEEEETTTTEEEEEETT------SCEEEECSSSBSCSEEECC--CSSCEEEEEEETTT-EEEEE
T ss_pred ceeeeecc--CCCceEEEEECCCCCEEEEEcCC------CEEEEEECCCCccceEecC--CCccEEEEEECCCC-EEEEE
Confidence 4221 111 1111122222 255566666643 357888887654211 111 11112233333 55 55555
Q ss_pred ccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCc
Q 012755 305 GMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNS 377 (457)
Q Consensus 305 G~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~ 377 (457)
+. ...+.+||..+.+-...-.. .......+.+ ++.+++.++..+.+..||..+..
T Consensus 307 ~~------d~~i~i~d~~~~~~~~~~~~------------~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 307 SM------DGSVRLWSLKQNTLLALSIV------------DGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp ET------TSEEEEEETTTTEEEEEEEC------------TTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred eC------CCcEEEEECCCCcEeEeccc------------CCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 43 24688899887653322111 1111222223 57777778777889999987654
No 132
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=95.65 E-value=1.2 Score=40.26 Aligned_cols=189 Identities=12% Similarity=-0.038 Sum_probs=102.3
Q ss_pred ccEEEEEec-CccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEE--eCCEEEEEceecCCcEEEEEECCCCcEEeCCCC
Q 012755 160 EHWVYLACI-LMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLA--VGTQLLVFGRELSGFAIWMYSLIANCWSKCPQM 236 (457)
Q Consensus 160 ~~~l~~~~~-~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~--~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~l 236 (457)
+..||+... ...+..||+....-..+...... ....++. .++.||+... ....+.++++....-+.+.+.
T Consensus 47 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~-----~p~~ia~d~~~~~lyv~d~--~~~~I~~~~~~g~~~~~~~~~ 119 (267)
T 1npe_A 47 DKVVYWTDISEPSIGRASLHGGEPTTIIRQDLG-----SPEGIALDHLGRTIFWTDS--QLDRIEVAKMDGTQRRVLFDT 119 (267)
T ss_dssp TTEEEEEETTTTEEEEEESSSCCCEEEECTTCC-----CEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECS
T ss_pred CCEEEEEECCCCEEEEEecCCCCcEEEEECCCC-----CccEEEEEecCCeEEEEEC--CCCEEEEEEcCCCCEEEEEEC
Confidence 456777643 46788899876532222111000 0111233 2678998753 345789999875433332111
Q ss_pred CCCccceeEEee--CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE--CCEEEEEeccCCCCCC
Q 012755 237 NLPRCLFGSSSL--GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDP 312 (457)
Q Consensus 237 p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~ 312 (457)
...+. ..+++- ++.||+..... ....++++++....-+.+..... ..-.+.++- ++.||+... .
T Consensus 120 ~~~~P-~~i~vd~~~g~lyv~~~~~----~~~~I~~~~~dg~~~~~~~~~~~-~~P~gia~d~~~~~lyv~d~------~ 187 (267)
T 1npe_A 120 GLVNP-RGIVTDPVRGNLYWTDWNR----DNPKIETSHMDGTNRRILAQDNL-GLPNGLTFDAFSSQLCWVDA------G 187 (267)
T ss_dssp SCSSE-EEEEEETTTTEEEEEECCS----SSCEEEEEETTSCCCEEEECTTC-SCEEEEEEETTTTEEEEEET------T
T ss_pred CCCCc-cEEEEeeCCCEEEEEECCC----CCcEEEEEecCCCCcEEEEECCC-CCCcEEEEcCCCCEEEEEEC------C
Confidence 11111 233332 68999985321 13578888876543333221111 112233333 578999742 2
Q ss_pred CceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCcEE
Q 012755 313 LTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQATNVVKKYNKTNNSWT 379 (457)
Q Consensus 313 ~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~~W~ 379 (457)
.+.+.+||+.+..-..+.. . .....+++.-++.||+.....+.|.++|+++++-.
T Consensus 188 ~~~I~~~~~~g~~~~~~~~--~----------~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 188 THRAECLNPAQPGRRKVLE--G----------LQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEM 242 (267)
T ss_dssp TTEEEEEETTEEEEEEEEE--C----------CCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCEEEEEecCCCceEEEec--C----------CCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCce
Confidence 4678999987643222211 1 11223556668999999877789999999876543
No 133
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.65 E-value=0.17 Score=48.25 Aligned_cols=226 Identities=8% Similarity=-0.014 Sum_probs=96.8
Q ss_pred cCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCc-EEeCCCCC-CCccceeE
Q 012755 168 ILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANC-WSKCPQMN-LPRCLFGS 245 (457)
Q Consensus 168 ~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~-W~~l~~lp-~~r~~~~~ 245 (457)
....+..||..+..|..+..+......-. ......++.+++.|+.+ ..+.+||..+++ |.....+. ....-.++
T Consensus 31 ~d~~i~iw~~~~~~~~~~~~~~~h~~~v~--~~~~s~~~~~l~s~s~d--~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~ 106 (377)
T 3dwl_C 31 ATNQVELYEQDGNGWKHARTFSDHDKIVT--CVDWAPKSNRIVTCSQD--RNAYVYEKRPDGTWKQTLVLLRLNRAATFV 106 (377)
T ss_dssp SSSCBCEEEEETTEEEECCCBCCCSSCEE--EEEECTTTCCEEEEETT--SSEEEC------CCCCEEECCCCSSCEEEE
T ss_pred CCCEEEEEEccCCceEEEEEEecCCceEE--EEEEeCCCCEEEEEeCC--CeEEEEEcCCCCceeeeeEecccCCceEEE
Confidence 35567778888877766665542111100 01122355666666543 358888888776 43322221 11111222
Q ss_pred Eee-CCEEEEEeeecCCCCccceEEEEeCCCCc-EEECCCCCC-CCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEE
Q 012755 246 SSL-GEVAIVAGGTDKNGCILKSAELYNSELGT-WETLPDMNL-PRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYN 320 (457)
Q Consensus 246 ~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~-W~~~~~~p~-~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd 320 (457)
+.. +++.++.|+.+ ..+.+||..+++ |.....+.. .......+.+ ++++.+.|+.+ ..+..||
T Consensus 107 ~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd 174 (377)
T 3dwl_C 107 RWSPNEDKFAVGSGA------RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD------RKAYVLS 174 (377)
T ss_dssp ECCTTSSCCEEEESS------SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS------SCEEEEE
T ss_pred EECCCCCEEEEEecC------CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC------CEEEEEE
Confidence 222 55666666643 357778887765 332222222 1111222222 56666666543 3467788
Q ss_pred CCCCceEEcCCCCCCCCC--CC---CCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcE--EEeccCCCccCCC
Q 012755 321 LETRTWKRIENMYPSNVG--TQ---SNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSW--TVVKRLPVRANSF 391 (457)
Q Consensus 321 ~~t~~W~~~~~~~~~~~~--~~---~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W--~~v~~~p~~~~~~ 391 (457)
..+............... .+ ...........+.+ ++++++.++..+.|..||..+..- ..+..+.....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-- 252 (377)
T 3dwl_C 175 AYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQL-- 252 (377)
T ss_dssp ECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSS--
T ss_pred EEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCC--
Confidence 765432221110000000 00 00001111222233 677777777778999999887642 22322222111
Q ss_pred CcceEEEEEeCCEEEEEcCcC
Q 012755 392 NGWGLAFKACGNSLLVIGGHR 412 (457)
Q Consensus 392 ~~~~~~~~~~~g~lyv~GG~~ 412 (457)
........-++++++.|+.+
T Consensus 253 -~v~~~~~s~~~~~l~~~~~~ 272 (377)
T 3dwl_C 253 -PLRSLLWANESAIVAAGYNY 272 (377)
T ss_dssp -CEEEEEEEETTEEEEEESSS
T ss_pred -ceEEEEEcCCCCEEEEEcCC
Confidence 01111223478887777543
No 134
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.57 E-value=1.6 Score=41.30 Aligned_cols=175 Identities=10% Similarity=0.050 Sum_probs=88.4
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeC-CCCCCCccceeEEe-e--CCEEEEEeeecCCCCccceEEEEeCCCCcEEE
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKC-PQMNLPRCLFGSSS-L--GEVAIVAGGTDKNGCILKSAELYNSELGTWET 280 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l-~~lp~~r~~~~~~~-~--~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~ 280 (457)
++..++.|+. ...+.+||..+++-... ..-..+ -.++.. . ++..++.|+.+ ..+.++|..+++...
T Consensus 165 ~~~~l~t~s~--D~~v~lwd~~~~~~~~~~~~h~~~--v~~~~~~~~~~g~~l~sgs~D------g~v~~wd~~~~~~~~ 234 (354)
T 2pbi_B 165 SDMQILTASG--DGTCALWDVESGQLLQSFHGHGAD--VLCLDLAPSETGNTFVSGGCD------KKAMVWDMRSGQCVQ 234 (354)
T ss_dssp SSSEEEEEET--TSEEEEEETTTCCEEEEEECCSSC--EEEEEECCCSSCCEEEEEETT------SCEEEEETTTCCEEE
T ss_pred CCCEEEEEeC--CCcEEEEeCCCCeEEEEEcCCCCC--eEEEEEEeCCCCCEEEEEeCC------CeEEEEECCCCcEEE
Confidence 3434444443 34688899988764321 110111 111111 1 34677777754 468889998877543
Q ss_pred CCCCCCCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CC
Q 012755 281 LPDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NN 356 (457)
Q Consensus 281 ~~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g 356 (457)
.-. ........+.+ ++..++.|+.+ ..+..||+.++.-..+-.... .......+.+ ++
T Consensus 235 ~~~--~h~~~v~~v~~~p~~~~l~s~s~D------~~v~lwd~~~~~~~~~~~~~~----------~~~~~~~~~~s~~g 296 (354)
T 2pbi_B 235 AFE--THESDVNSVRYYPSGDAFASGSDD------ATCRLYDLRADREVAIYSKES----------IIFGASSVDFSLSG 296 (354)
T ss_dssp EEC--CCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEEECCTT----------CCSCEEEEEECTTS
T ss_pred Eec--CCCCCeEEEEEeCCCCEEEEEeCC------CeEEEEECCCCcEEEEEcCCC----------cccceeEEEEeCCC
Confidence 211 11111222222 56666666643 357789988764322211111 1112223333 67
Q ss_pred EEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEE-EeCCEEEEEcCcCC
Q 012755 357 QLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFK-ACGNSLLVIGGHRE 413 (457)
Q Consensus 357 ~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~-~~~g~lyv~GG~~~ 413 (457)
.+++.|+..+.+..||..+.. .+..+.... ..-..+. .-+++.++.|+.++
T Consensus 297 ~~l~~g~~d~~i~vwd~~~~~--~~~~l~~h~----~~v~~l~~spdg~~l~sgs~D~ 348 (354)
T 2pbi_B 297 RLLFAGYNDYTINVWDVLKGS--RVSILFGHE----NRVSTLRVSPDGTAFCSGSWDH 348 (354)
T ss_dssp SEEEEEETTSCEEEEETTTCS--EEEEECCCS----SCEEEEEECTTSSCEEEEETTS
T ss_pred CEEEEEECCCcEEEEECCCCc--eEEEEECCC----CcEEEEEECCCCCEEEEEcCCC
Confidence 888888888899999987654 222222111 1111222 23677777787764
No 135
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.55 E-value=0.69 Score=44.30 Aligned_cols=223 Identities=7% Similarity=-0.083 Sum_probs=104.9
Q ss_pred cEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCc
Q 012755 161 HWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPR 240 (457)
Q Consensus 161 ~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r 240 (457)
..|+..+....+..||.....-..+.....+ ........++..++.++. ...+.+||..+++-...-..+...
T Consensus 121 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~ 193 (425)
T 1r5m_A 121 NSIVTGVENGELRLWNKTGALLNVLNFHRAP-----IVSVKWNKDGTHIISMDV--ENVTILWNVISGTVMQHFELKETG 193 (425)
T ss_dssp SEEEEEETTSCEEEEETTSCEEEEECCCCSC-----EEEEEECTTSSEEEEEET--TCCEEEEETTTTEEEEEECCC---
T ss_pred CEEEEEeCCCeEEEEeCCCCeeeeccCCCcc-----EEEEEECCCCCEEEEEec--CCeEEEEECCCCcEEEEeeccccC
Confidence 3444444456678888544433333211110 000011224555555543 235888998877654321111111
Q ss_pred --------------cceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEE-CCCCCCCCcceeEEEE-CCEEEEEe
Q 012755 241 --------------CLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWET-LPDMNLPRKLCSGFFM-DGKFYIIG 304 (457)
Q Consensus 241 --------------~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~-~~~~p~~r~~~~~~~~-~g~iyv~G 304 (457)
...+++...+..+++|+.+ ..+.+||..+++-.. +.. ....-..++.. ++++++.|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------g~i~~~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~ 265 (425)
T 1r5m_A 194 GSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK------GAIFVYQITEKTPTGKLIG--HHGPISVLEFNDTNKLLLSA 265 (425)
T ss_dssp ------------CCCBSCCEEEETTEEEEECGG------GCEEEEETTCSSCSEEECC--CSSCEEEEEEETTTTEEEEE
T ss_pred ccceeeccccCCcceeeEEEEcCCCEEEEEcCC------CeEEEEEcCCCceeeeecc--CCCceEEEEECCCCCEEEEE
Confidence 0222233333445666543 468899988764211 111 11111222222 56566666
Q ss_pred ccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEEecc
Q 012755 305 GMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV-NNQLYSADQATNVVKKYNKTNNSWTVVKR 383 (457)
Q Consensus 305 G~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~ 383 (457)
+.+ ..+.+||..+.+-...-... ......++.. ++ +++.++..+.+..||..+.+-...-.
T Consensus 266 ~~d------~~i~i~d~~~~~~~~~~~~~-----------~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~ 327 (425)
T 1r5m_A 266 SDD------GTLRIWHGGNGNSQNCFYGH-----------SQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSI 327 (425)
T ss_dssp ETT------SCEEEECSSSBSCSEEECCC-----------SSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred cCC------CEEEEEECCCCccceEecCC-----------CccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecc
Confidence 532 35788888765422211101 1111223333 55 66677778899999998765332211
Q ss_pred CCCccCCCCcceEEEE-EeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 384 LPVRANSFNGWGLAFK-ACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 384 ~p~~~~~~~~~~~~~~-~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
. .. ..-..+. .-++++++.|+.++ .+.+||..+
T Consensus 328 ~--~~----~~i~~~~~s~~~~~l~~~~~dg------~i~i~~~~~ 361 (425)
T 1r5m_A 328 V--DG----VPIFAGRISQDGQKYAVAFMDG------QVNVYDLKK 361 (425)
T ss_dssp C--TT----CCEEEEEECTTSSEEEEEETTS------CEEEEECHH
T ss_pred c--CC----ccEEEEEEcCCCCEEEEEECCC------eEEEEECCC
Confidence 1 11 1111122 23567777776553 367777764
No 136
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.55 E-value=1.7 Score=45.43 Aligned_cols=186 Identities=11% Similarity=-0.031 Sum_probs=94.0
Q ss_pred cEEEEEECCCCcEEeCCCCC-CCccceeEE-eeCCEEEEEeeecCCCCccceEEEEeCCCC-cEEECCCCCCCC----cc
Q 012755 218 FAIWMYSLIANCWSKCPQMN-LPRCLFGSS-SLGEVAIVAGGTDKNGCILKSAELYNSELG-TWETLPDMNLPR----KL 290 (457)
Q Consensus 218 ~~v~~yd~~t~~W~~l~~lp-~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~-~W~~~~~~p~~r----~~ 290 (457)
..++++|..+++-..+.... .......++ .-+++..+++..+.. .....+.++|..++ ..+.+....... ..
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 313 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRA-QNECKVNAYDAETGRFVRTLFVETDKHYVEPLH 313 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTT-SCEEEEEEEETTTCCEEEEEEEEECSSCCCCCS
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCC-CCeeEEEEEECCCCceeeEEEEccCCCeECccC
Confidence 57999999998876654321 111111222 225554444444332 23468899999998 666553211111 01
Q ss_pred eeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CC-EEEEEecCC
Q 012755 291 CSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NN-QLYSADQAT 365 (457)
Q Consensus 291 ~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g-~ly~~gg~~ 365 (457)
.....- +|++++.+..++ ...++.+|........+..... .....+.. +| .||+.+...
T Consensus 314 ~~~~sp~~dg~~l~~~~~~g----~~~l~~~~~~~~~~~~l~~~~~------------~v~~~~~~spdg~~l~~~~~~~ 377 (706)
T 2z3z_A 314 PLTFLPGSNNQFIWQSRRDG----WNHLYLYDTTGRLIRQVTKGEW------------EVTNFAGFDPKGTRLYFESTEA 377 (706)
T ss_dssp CCEECTTCSSEEEEEECTTS----SCEEEEEETTSCEEEECCCSSS------------CEEEEEEECTTSSEEEEEESSS
T ss_pred CceeecCCCCEEEEEEccCC----ccEEEEEECCCCEEEecCCCCe------------EEEeeeEEcCCCCEEEEEecCC
Confidence 112233 778665554332 3467888877766666643211 11111223 34 566665443
Q ss_pred ----CeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 366 ----NVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 366 ----~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
..++.+|.++...+.+... . ........-+|+.+++...... ....+++||.+++
T Consensus 378 ~~~~~~l~~~d~~~~~~~~l~~~---~----~~~~~~~spdg~~l~~~~~~~~--~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 378 SPLERHFYCIDIKGGKTKDLTPE---S----GMHRTQLSPDGSAIIDIFQSPT--VPRKVTVTNIGKG 436 (706)
T ss_dssp CTTCBEEEEEETTCCCCEESCCS---S----SEEEEEECTTSSEEEEEEECSS--CSCEEEEEESSSC
T ss_pred CCceEEEEEEEcCCCCceeccCC---C----ceEEEEECCCCCEEEEEecCCC--CCcEEEEEECCCC
Confidence 3789999988776655421 1 1111122235555554432211 1235777877653
No 137
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.47 E-value=0.29 Score=45.24 Aligned_cols=187 Identities=11% Similarity=0.052 Sum_probs=95.0
Q ss_pred cEEEEEecCccEEEEeCCCCcEEeC-CCCCCCccccCCCeeeEEeCCEEEEEceec-------------CCcEEEEEECC
Q 012755 161 HWVYLACILMPWEAFDPLRQRWMRL-PRMQCDECFTSADKESLAVGTQLLVFGREL-------------SGFAIWMYSLI 226 (457)
Q Consensus 161 ~~l~~~~~~~~~~~ydp~~~~W~~l-~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~-------------~~~~v~~yd~~ 226 (457)
+.+|+......+..||+. .+...+ ................+..++.+|+..... ....++++|+.
T Consensus 83 g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (314)
T 1pjx_A 83 NQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD 161 (314)
T ss_dssp SEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT
T ss_pred CcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC
Confidence 677877655678999998 776655 322211111111111222367788765322 12578999987
Q ss_pred CCcEEeCC-CCCCCccceeEEee-----CC-EEEEEeeecCCCCccceEEEEeCC-CCcEEE---CCCCCCCC-cceeEE
Q 012755 227 ANCWSKCP-QMNLPRCLFGSSSL-----GE-VAIVAGGTDKNGCILKSAELYNSE-LGTWET---LPDMNLPR-KLCSGF 294 (457)
Q Consensus 227 t~~W~~l~-~lp~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~v~~yd~~-t~~W~~---~~~~p~~r-~~~~~~ 294 (457)
++...+. .+..+ .+++.. ++ .+|+.... ...+.+||+. +++... ...++... ......
T Consensus 162 -g~~~~~~~~~~~~---~~i~~~~~~d~dg~~l~v~~~~------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i 231 (314)
T 1pjx_A 162 -GQMIQVDTAFQFP---NGIAVRHMNDGRPYQLIVAETP------TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGM 231 (314)
T ss_dssp -SCEEEEEEEESSE---EEEEEEECTTSCEEEEEEEETT------TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEE
T ss_pred -CCEEEeccCCCCc---ceEEEecccCCCCCEEEEEECC------CCeEEEEECCCCCccccceEEEECCCCCCCCCCce
Confidence 5554431 11111 223322 33 57776421 2568888875 443321 11122111 112222
Q ss_pred EE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCE-EEEEecCCCeEE
Q 012755 295 FM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQ-LYSADQATNVVK 369 (457)
Q Consensus 295 ~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~-ly~~gg~~~~v~ 369 (457)
.. +|.+|+.... .+.+.+||+.+++-...-..+. . ....+.+ +++ ||+.....+.|+
T Consensus 232 ~~d~~G~l~v~~~~------~~~i~~~d~~~g~~~~~~~~~~-----------~-~~~~i~~~~dg~~l~v~~~~~~~l~ 293 (314)
T 1pjx_A 232 DFDEDNNLLVANWG------SSHIEVFGPDGGQPKMRIRCPF-----------E-KPSNLHFKPQTKTIFVTEHENNAVW 293 (314)
T ss_dssp EEBTTCCEEEEEET------TTEEEEECTTCBSCSEEEECSS-----------S-CEEEEEECTTSSEEEEEETTTTEEE
T ss_pred EECCCCCEEEEEcC------CCEEEEEcCCCCcEeEEEeCCC-----------C-CceeEEECCCCCEEEEEeCCCCeEE
Confidence 22 6888886421 2468899998554321111111 1 1223333 455 888876667999
Q ss_pred EEECCCC
Q 012755 370 KYNKTNN 376 (457)
Q Consensus 370 ~Yd~~~~ 376 (457)
+|+++..
T Consensus 294 ~~~~~~~ 300 (314)
T 1pjx_A 294 KFEWQRN 300 (314)
T ss_dssp EEECSSC
T ss_pred EEeCCCC
Confidence 9998764
No 138
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.47 E-value=0.74 Score=47.48 Aligned_cols=114 Identities=11% Similarity=0.054 Sum_probs=68.1
Q ss_pred EEeeCCEEEEEeeecCCCCccceEEEEeCCCCc--EEECCCCCCC---C---cceeEEEECCEEEEEeccCCCCCCCceE
Q 012755 245 SSSLGEVAIVAGGTDKNGCILKSAELYNSELGT--WETLPDMNLP---R---KLCSGFFMDGKFYIIGGMSSPTDPLTCG 316 (457)
Q Consensus 245 ~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~~---r---~~~~~~~~~g~iyv~GG~~~~~~~~~~~ 316 (457)
.++.+++||+.... ..++.+|.+|++ |+.-...+.. . ...+.++.+++||+... ...+
T Consensus 64 P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~-------dg~l 129 (582)
T 1flg_A 64 AIVSDGVIYVTASY-------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL-------DASV 129 (582)
T ss_dssp CEEETTEEEEEETT-------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET-------TTEE
T ss_pred cEEECCEEEEEcCC-------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC-------CCEE
Confidence 35679999997542 248999998886 9875433221 1 12334578999998531 3468
Q ss_pred EEEECCCCc--eEEcCCCCCCCCCCCCCCCCCCCCEEEEECC------EEEEEec-----CCCeEEEEECCCC--cEEE
Q 012755 317 EEYNLETRT--WKRIENMYPSNVGTQSNPAMSSPPLVAVVNN------QLYSADQ-----ATNVVKKYNKTNN--SWTV 380 (457)
Q Consensus 317 ~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g------~ly~~gg-----~~~~v~~Yd~~~~--~W~~ 380 (457)
.++|.+|++ |+.-...+. .......+.++.++ .+|+-.. ..+.++.||++++ .|+.
T Consensus 130 ~AlD~~TG~~~W~~~~~~~~--------~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 130 VALNKNTGKVVWKKKFADHG--------AGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EEEESSSCCEEEEEECSCGG--------GTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred EEEECCCCCEEeeecCCCCC--------cCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeec
Confidence 999998875 875432111 00011112233455 6655321 2568999999876 5864
No 139
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=95.39 E-value=1.5 Score=39.62 Aligned_cols=184 Identities=15% Similarity=0.047 Sum_probs=102.8
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCC--CCCCCccceeEEe--eCCEEEEEeeecCCCCccceEEEEeCCCCcEEE
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCP--QMNLPRCLFGSSS--LGEVAIVAGGTDKNGCILKSAELYNSELGTWET 280 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~--~lp~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~ 280 (457)
++.||+... ....+.++|+.++.-..+. .+..| +++++ .++.||+.-.. ...+.++|+....-+.
T Consensus 47 ~~~ly~~d~--~~~~I~~~~~~g~~~~~~~~~~~~~p---~~ia~d~~~~~lyv~d~~------~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 47 DKVVYWTDI--SEPSIGRASLHGGEPTTIIRQDLGSP---EGIALDHLGRTIFWTDSQ------LDRIEVAKMDGTQRRV 115 (267)
T ss_dssp TTEEEEEET--TTTEEEEEESSSCCCEEEECTTCCCE---EEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEE
T ss_pred CCEEEEEEC--CCCEEEEEecCCCCcEEEEECCCCCc---cEEEEEecCCeEEEEECC------CCEEEEEEcCCCCEEE
Confidence 578888653 3457999999876433321 12222 33443 26899998431 3578889887544333
Q ss_pred CCCCCCCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CC
Q 012755 281 LPDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NN 356 (457)
Q Consensus 281 ~~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g 356 (457)
+..... ..-..+++- ++.||+..... ....++++++....-+.+... . .....+++.- ++
T Consensus 116 ~~~~~~-~~P~~i~vd~~~g~lyv~~~~~----~~~~I~~~~~dg~~~~~~~~~-~----------~~~P~gia~d~~~~ 179 (267)
T 1npe_A 116 LFDTGL-VNPRGIVTDPVRGNLYWTDWNR----DNPKIETSHMDGTNRRILAQD-N----------LGLPNGLTFDAFSS 179 (267)
T ss_dssp EECSSC-SSEEEEEEETTTTEEEEEECCS----SSCEEEEEETTSCCCEEEECT-T----------CSCEEEEEEETTTT
T ss_pred EEECCC-CCccEEEEeeCCCEEEEEECCC----CCcEEEEEecCCCCcEEEEEC-C----------CCCCcEEEEcCCCC
Confidence 211111 111233333 68999985321 135678888765443333211 1 1122234433 57
Q ss_pred EEEEEecCCCeEEEEECCCCcEEEec-cCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 357 QLYSADQATNVVKKYNKTNNSWTVVK-RLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 357 ~ly~~gg~~~~v~~Yd~~~~~W~~v~-~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
.||+.....+.|.++|+++..=+.+. .+..+ ..++..++.||+..... ..+.++|++++
T Consensus 180 ~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P--------~gi~~d~~~lyva~~~~------~~v~~~d~~~g 239 (267)
T 1npe_A 180 QLCWVDAGTHRAECLNPAQPGRRKVLEGLQYP--------FAVTSYGKNLYYTDWKT------NSVIAMDLAIS 239 (267)
T ss_dssp EEEEEETTTTEEEEEETTEEEEEEEEECCCSE--------EEEEEETTEEEEEETTT------TEEEEEETTTT
T ss_pred EEEEEECCCCEEEEEecCCCceEEEecCCCCc--------eEEEEeCCEEEEEECCC------CeEEEEeCCCC
Confidence 99999887889999999864322221 11111 23445589999965332 15888999874
No 140
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.35 E-value=0.44 Score=45.38 Aligned_cols=186 Identities=8% Similarity=-0.012 Sum_probs=90.3
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCC---CCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEE
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQM---NLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWET 280 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~l---p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~ 280 (457)
++. ++.|+. ...+.+||..+++-...... .....-.+++. -+++.++.|+.+ ..+.++|..+++-..
T Consensus 93 d~~-l~~~s~--dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d------~~i~iwd~~~~~~~~ 163 (344)
T 4gqb_B 93 ERG-ILVASD--SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD------ICIKVWDLAQQVVLS 163 (344)
T ss_dssp TTE-EEEEET--TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTTEEEE
T ss_pred CCe-EEEEEC--CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC------CeEEEEECCCCcEEE
Confidence 344 344543 34688889887642211100 01111122222 266777777654 358889998876432
Q ss_pred CCCCCCCCcceeEEEE--CC-EEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE---
Q 012755 281 LPDMNLPRKLCSGFFM--DG-KFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--- 354 (457)
Q Consensus 281 ~~~~p~~r~~~~~~~~--~g-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--- 354 (457)
. +.........+.+ ++ .+++.|+.+ ..+.+||..+.+-...-.... .......+..
T Consensus 164 ~--~~~h~~~V~~~~~~~~~~~~l~s~s~D------~~v~iwd~~~~~~~~~~~~~~----------~~~~~~~~~~~p~ 225 (344)
T 4gqb_B 164 S--YRAHAAQVTCVAASPHKDSVFLSCSED------NRILLWDTRCPKPASQIGCSA----------PGYLPTSLAWHPQ 225 (344)
T ss_dssp E--ECCCSSCEEEEEECSSCTTEEEEEETT------SCEEEEETTSSSCEEECC--------------CCCEEEEEECSS
T ss_pred E--EcCcCCceEEEEecCCCCCceeeeccc------cccccccccccceeeeeecce----------eeccceeeeecCC
Confidence 1 1111111112222 33 466666543 357889998776433211111 1111122222
Q ss_pred CCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEe-CC-EEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 355 NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKAC-GN-SLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 355 ~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~-~g-~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
++++++.|+..+.|..||..+.+ .+..+.... ..-..++.. ++ ++++.|+.++ .+.+||..+.
T Consensus 226 ~~~~l~sg~~dg~v~~wd~~~~~--~~~~~~~h~----~~v~~v~fsp~g~~~lasgs~D~------~i~vwd~~~~ 290 (344)
T 4gqb_B 226 QSEVFVFGDENGTVSLVDTKSTS--CVLSSAVHS----QCVTGLVFSPHSVPFLASLSEDC------SLAVLDSSLS 290 (344)
T ss_dssp CTTEEEEEETTSEEEEEESCC----CCEEEECCS----SCEEEEEECSSSSCCEEEEETTS------CEEEECTTCC
T ss_pred CCcceEEeccCCcEEEEECCCCc--EEEEEcCCC----CCEEEEEEccCCCeEEEEEeCCC------eEEEEECCCC
Confidence 56788888888899999998653 222221111 111122221 33 5666776653 4778888764
No 141
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=95.33 E-value=0.96 Score=42.53 Aligned_cols=143 Identities=8% Similarity=-0.043 Sum_probs=78.9
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEE-eeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSS-SLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPD 283 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~ 283 (457)
++.+|+++.. ...+++||+.+++.+.+.. +. .-.+++ .-++++|+... ..+.+||+.+++.+.+..
T Consensus 60 ~~~l~~~d~~--~~~i~~~d~~~~~~~~~~~-~~--~v~~i~~~~dg~l~v~~~--------~gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 60 SGTAWWFNIL--ERELHELHLASGRKTVHAL-PF--MGSALAKISDSKQLIASD--------DGLFLRDTATGVLTLHAE 126 (326)
T ss_dssp TTEEEEEEGG--GTEEEEEETTTTEEEEEEC-SS--CEEEEEEEETTEEEEEET--------TEEEEEETTTCCEEEEEC
T ss_pred CCEEEEEECC--CCEEEEEECCCCcEEEEEC-CC--cceEEEEeCCCeEEEEEC--------CCEEEEECCCCcEEEEee
Confidence 3677776533 3479999999887654421 21 112222 23678777531 348999999999876643
Q ss_pred CCCC--CcceeEEE--ECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-CC-E
Q 012755 284 MNLP--RKLCSGFF--MDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV-NN-Q 357 (457)
Q Consensus 284 ~p~~--r~~~~~~~--~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~g-~ 357 (457)
.+.. ........ -+|++|+.............+++|| +++...+..... ...+++.. ++ .
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~------------~~~~i~~s~dg~~ 192 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADIS------------IPNSICFSPDGTT 192 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEES------------SEEEEEECTTSCE
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCc------------ccCCeEEcCCCCE
Confidence 3221 11111222 2678887432111111245788888 456554422100 11123322 45 5
Q ss_pred EEEEecCCCeEEEEECC
Q 012755 358 LYSADQATNVVKKYNKT 374 (457)
Q Consensus 358 ly~~gg~~~~v~~Yd~~ 374 (457)
||+.....+.|++||.+
T Consensus 193 lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 193 GYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp EEEEETTTCEEEEEEBC
T ss_pred EEEEECCCCEEEEEEcc
Confidence 88887667899999975
No 142
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=95.30 E-value=0.86 Score=42.43 Aligned_cols=154 Identities=12% Similarity=0.055 Sum_probs=72.9
Q ss_pred ccEEEEEe-cCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCC-EEEEEceecCCcEEEEEECCCCcEEeCCCCC
Q 012755 160 EHWVYLAC-ILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGT-QLLVFGRELSGFAIWMYSLIANCWSKCPQMN 237 (457)
Q Consensus 160 ~~~l~~~~-~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~-~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp 237 (457)
+..+|+.+ ....+..+|+.+.+....-..+...... ...+..++ .+|+.+. ....+++||+.+++-...-..+
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~---~~~~s~dg~~~~v~~~--~~~~i~~~d~~t~~~~~~~~~~ 84 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPG---TAMMAPDNRTAYVLNN--HYGDIYGIDLDTCKNTFHANLS 84 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSC---EEEECTTSSEEEEEET--TTTEEEEEETTTTEEEEEEESC
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCc---eeEECCCCCEEEEEeC--CCCcEEEEeCCCCcEEEEEEcc
Confidence 34455543 4678899999887653322222100011 11222344 5777653 3457999999988754321111
Q ss_pred C-----CccceeEEee--CCEEEEEeee--cCCCC---ccceEEEEeCCCCcEEE-CCCCCCCCcceeEE-EECCEEEEE
Q 012755 238 L-----PRCLFGSSSL--GEVAIVAGGT--DKNGC---ILKSAELYNSELGTWET-LPDMNLPRKLCSGF-FMDGKFYII 303 (457)
Q Consensus 238 ~-----~r~~~~~~~~--~~~iyv~GG~--~~~~~---~~~~v~~yd~~t~~W~~-~~~~p~~r~~~~~~-~~~g~iyv~ 303 (457)
. ......++.- +..+|+.+.. ..... ....+.+||+.+++-.. +.....++...+++ .-+|++|+.
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~l~~~ 164 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVA 164 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEE
T ss_pred cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCcEEEc
Confidence 1 0111222222 3456655421 00000 12578999988743111 11111122222222 236777774
Q ss_pred eccCCCCCCCceEEEEECCCCceE
Q 012755 304 GGMSSPTDPLTCGEEYNLETRTWK 327 (457)
Q Consensus 304 GG~~~~~~~~~~~~~yd~~t~~W~ 327 (457)
++ .+.+||+.+.+-.
T Consensus 165 ~~---------~i~~~d~~~~~~~ 179 (349)
T 1jmx_B 165 GP---------DIYKMDVKTGKYT 179 (349)
T ss_dssp SS---------SEEEECTTTCCEE
T ss_pred cC---------cEEEEeCCCCcee
Confidence 21 2788888777643
No 143
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=95.30 E-value=1.9 Score=40.35 Aligned_cols=194 Identities=13% Similarity=0.052 Sum_probs=97.5
Q ss_pred cEEEEEECCCCcEEeCCCCCCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCC--cEEECCC-C-----CCCC
Q 012755 218 FAIWMYSLIANCWSKCPQMNLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELG--TWETLPD-M-----NLPR 288 (457)
Q Consensus 218 ~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~--~W~~~~~-~-----p~~r 288 (457)
..+.++|+.+++......-..-..-.++++ -++.+|+.... ...+.+||+... .-..+.. . ....
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~------~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~ 142 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVA------LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHF 142 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETT------TTEEEEECTTCSSCCSEEESBTTBCCCSTTCC
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECC------CCEEEEEeCCCCeEEEEEecccCCCCCCcccc
Confidence 368899998776543211000011123333 26779987542 357889998765 2222211 0 1111
Q ss_pred cce-eEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCC-CCCCEEEEE-C-CEEEEEe
Q 012755 289 KLC-SGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAM-SSPPLVAVV-N-NQLYSAD 362 (457)
Q Consensus 289 ~~~-~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-r~~~~~~~~-~-g~ly~~g 362 (457)
... .+++. ++.||+..++ ....+.+||+....-..+...... ....+.. ....++++- + +.||+..
T Consensus 143 ~~P~~ia~~~~~g~lyv~d~~-----~~~~I~~~~~~g~~~~~~~~~g~~---~~~~~~~~~~p~gia~d~~~g~l~v~d 214 (329)
T 3fvz_A 143 CQPTDVAVEPSTGAVFVSDGY-----CNSRIVQFSPSGKFVTQWGEESSG---SSPRPGQFSVPHSLALVPHLDQLCVAD 214 (329)
T ss_dssp SSEEEEEECTTTCCEEEEECS-----SCCEEEEECTTSCEEEEECEECCS---SSCCTTEESCEEEEEEETTTTEEEEEE
T ss_pred CCCcEEEEeCCCCeEEEEeCC-----CCCeEEEEcCCCCEEEEeccCCCC---CCCCCcccCCCcEEEEECCCCEEEEEE
Confidence 122 33333 6899998642 135688999655443433321110 0000001 122334443 4 8999999
Q ss_pred cCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCC-CCceEEEEEeeCCCC
Q 012755 363 QATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHREL-QGEIIVLHSWDPTDG 429 (457)
Q Consensus 363 g~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~-~~~~~~v~~y~~~~~ 429 (457)
...+.|.+||+++++....-..+..... - .+++...+.+|+..|..-- ......+.+|++.++
T Consensus 215 ~~~~~I~~~~~~~G~~~~~~~~~~~~~~--~--~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g 278 (329)
T 3fvz_A 215 RENGRIQCFKTDTKEFVREIKHASFGRN--V--FAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSG 278 (329)
T ss_dssp TTTTEEEEEETTTCCEEEEECCTTTTTC--E--EEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTC
T ss_pred CCCCEEEEEECCCCcEEEEEeccccCCC--c--ceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCC
Confidence 8888999999996665543222211110 1 1222334667776664211 111235778887664
No 144
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.30 E-value=3.1 Score=44.12 Aligned_cols=215 Identities=10% Similarity=-0.010 Sum_probs=108.2
Q ss_pred cEEEEEecCccEEEEeCCCCcEEeCCCCCCCcc-ccCCCeeeEE-eCCEEEEEceecCCcEEEEEECCC------CcEE-
Q 012755 161 HWVYLACILMPWEAFDPLRQRWMRLPRMQCDEC-FTSADKESLA-VGTQLLVFGRELSGFAIWMYSLIA------NCWS- 231 (457)
Q Consensus 161 ~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~-~~~~~~~~~~-~~~~lyv~GG~~~~~~v~~yd~~t------~~W~- 231 (457)
+.|++.. ...+..||+.++++........... ....-..+.. .++.|++.. . ...+++||+.+ ..+.
T Consensus 384 g~lWigt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT-~--~~Gl~~~~~~~~~~~~~~~~~~ 459 (758)
T 3ott_A 384 QQLWIAT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWIST-C--LGGIFVVDKHKLMQSTSGQYIA 459 (758)
T ss_dssp SCEEEEE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEE-S--SSCEEEEEHHHHHHCCSSEEEC
T ss_pred CCEEEEe-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEE-C--CCceEEEccccccccCCcceec
Confidence 4455544 4578899999988866531111000 0000001111 246777731 1 12478888763 2221
Q ss_pred --e---CCCCCCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCC-CcceeEEEE--CCEEEE
Q 012755 232 --K---CPQMNLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLP-RKLCSGFFM--DGKFYI 302 (457)
Q Consensus 232 --~---l~~lp~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~-r~~~~~~~~--~g~iyv 302 (457)
. ...++... -.++.. -++.|+++||.. .-+.+||+.+++++....-... ......... +|.|++
T Consensus 460 ~~~~~~~~~l~~~~-i~~i~~d~~g~lWi~~~t~------~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWi 532 (758)
T 3ott_A 460 EQNYSVHNGLSGMF-INQIIPDNEGNVWVLLYNN------KGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWV 532 (758)
T ss_dssp SEEECGGGTCSCSC-EEEEEECTTSCEEEEETTC------SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEE
T ss_pred ccccccccccccce-eeeEEEcCCCCEEEEccCC------CCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEE
Confidence 1 11222211 112211 257888866643 3478899999999876421111 111222223 577886
Q ss_pred EeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCcEEEec
Q 012755 303 IGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQATNVVKKYNKTNNSWTVVK 382 (457)
Q Consensus 303 ~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~~W~~v~ 382 (457)
.. ...+.+||+.++++.....-.. + .....+++.-+|.|++-. .+.+.+||+++.+.+...
T Consensus 533 gt--------~~Gl~~~~~~~~~~~~~~~~gl--------~-~~~i~~i~~~~g~lWi~t--~~Gl~~~~~~~~~~~~~~ 593 (758)
T 3ott_A 533 GF--------HGGVMRINPKDESQQSISFGSF--------S-NNEILSMTCVKNSIWVST--TNGLWIIDRKTMDARQQN 593 (758)
T ss_dssp EE--------TTEEEEECC--CCCCBCCCCC------------CCEEEEEEETTEEEEEE--SSCEEEEETTTCCEEEC-
T ss_pred Ee--------cCceEEEecCCCceEEecccCC--------C-ccceEEEEECCCCEEEEC--CCCeEEEcCCCceeEEec
Confidence 42 1357889999988776531100 0 122233444588888775 467999999998876543
Q ss_pred cCCCccCCCCcceEEEEE-eCCEEEEEcCcC
Q 012755 383 RLPVRANSFNGWGLAFKA-CGNSLLVIGGHR 412 (457)
Q Consensus 383 ~~p~~~~~~~~~~~~~~~-~~g~lyv~GG~~ 412 (457)
++... ...++.. -+|.||+ ||..
T Consensus 594 -~~~~~-----~~~~~~~~~~G~l~f-G~~~ 617 (758)
T 3ott_A 594 -MTNKR-----FTSLLFDPKEDCVYL-GGAD 617 (758)
T ss_dssp --CCCC-----CSEEEEETTTTEEEE-ECBS
T ss_pred -CCCCc-----eeeeEEECCCCcEEE-ecCC
Confidence 33321 1122223 3677665 5554
No 145
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=95.26 E-value=1.6 Score=44.73 Aligned_cols=241 Identities=11% Similarity=-0.000 Sum_probs=115.4
Q ss_pred ccEEEEEec-CccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEe-CCEEEEEceecCCcEEEEEECC--CCcEEeCCC
Q 012755 160 EHWVYLACI-LMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAV-GTQLLVFGRELSGFAIWMYSLI--ANCWSKCPQ 235 (457)
Q Consensus 160 ~~~l~~~~~-~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~v~~yd~~--t~~W~~l~~ 235 (457)
.+.+|+... .+.+..+|+.+.+-.. .++.....+. ..+.. +..+|+.+. ...+.++|.. +.+= +..
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~--~i~~g~~p~~---v~~SpDGr~lyv~~~---dg~V~viD~~~~t~~~--v~~ 235 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKT--VLDTGYAVHI---SRLSASGRYLFVIGR---DGKVNMIDLWMKEPTT--VAE 235 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEE--EEECSSCEEE---EEECTTSCEEEEEET---TSEEEEEETTSSSCCE--EEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEE--EEeCCCCccc---eEECCCCCEEEEEcC---CCeEEEEECCCCCCcE--eEE
Confidence 456776643 6788999998875432 1222111111 12333 456777542 4579999985 4432 222
Q ss_pred CCCCccceeEEee-----CC-EEEEEeeecCCCCccceEEEEeCCCCcEEE-CC--CC--------CCCCcceeEEEECC
Q 012755 236 MNLPRCLFGSSSL-----GE-VAIVAGGTDKNGCILKSAELYNSELGTWET-LP--DM--------NLPRKLCSGFFMDG 298 (457)
Q Consensus 236 lp~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~-~~--~~--------p~~r~~~~~~~~~g 298 (457)
++....-..++.- ++ .+||..-. ...+.++|..|.+=.. ++ .+ |.+|.....+..++
T Consensus 236 i~~G~~P~~ia~s~~~~pDGk~l~v~n~~------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~ 309 (567)
T 1qks_A 236 IKIGSEARSIETSKMEGWEDKYAIAGAYW------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYR 309 (567)
T ss_dssp EECCSEEEEEEECCSTTCTTTEEEEEEEE------TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSS
T ss_pred EecCCCCceeEEccccCCCCCEEEEEEcc------CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCC
Confidence 2222211223332 34 67766432 2567889987765322 21 11 12222221122233
Q ss_pred EEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEE-ECCE-EEEEecCCCeEEEEECCCC
Q 012755 299 KFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAV-VNNQ-LYSADQATNVVKKYNKTNN 376 (457)
Q Consensus 299 ~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~g~-ly~~gg~~~~v~~Yd~~~~ 376 (457)
..+++.- .....+...|..+.....+..+.. .+..+.... -+|+ +|+.....+.|.++|.+++
T Consensus 310 ~~~vv~~-----~~~g~v~~vd~~~~~~~~v~~i~~----------~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~ 374 (567)
T 1qks_A 310 PEFIVNV-----KETGKILLVDYTDLNNLKTTEISA----------ERFLHDGGLDGSHRYFITAANARNKLVVIDTKEG 374 (567)
T ss_dssp SEEEEEE-----TTTTEEEEEETTCSSEEEEEEEEC----------CSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred CEEEEEe-----cCCCeEEEEecCCCccceeeeeec----------cccccCceECCCCCEEEEEeCCCCeEEEEECCCC
Confidence 3333321 123567778877765544444333 233333332 2454 4555556789999999987
Q ss_pred cEEE---e-ccCCCccCCCCcceEEEEEe-CCEEEEEcCcCCCCCceEEEEEeeCCCCCCCCCCeeEecc
Q 012755 377 SWTV---V-KRLPVRANSFNGWGLAFKAC-GNSLLVIGGHRELQGEIIVLHSWDPTDGNSGEAQWNELAV 441 (457)
Q Consensus 377 ~W~~---v-~~~p~~~~~~~~~~~~~~~~-~g~lyv~GG~~~~~~~~~~v~~y~~~~~~w~~~~W~~l~~ 441 (457)
+=.. + ...|.+ +.|+.+..- ++.+|+.+-.. .+ .+.++|.+...-....|+++..
T Consensus 375 kl~~~i~vgg~~Php-----g~g~~~~~p~~g~v~~t~~~g-~~----~Vsvid~~~~~~~~~~~kvv~~ 434 (567)
T 1qks_A 375 KLVAIEDTGGQTPHP-----GRGANFVHPTFGPVWATSHMG-DD----SVALIGTDPEGHPDNAWKILDS 434 (567)
T ss_dssp EEEEEEECSSSSBCC-----TTCEEEEETTTEEEEEEEBSS-SS----EEEEEECCTTTCTTTBTSEEEE
T ss_pred cEEEEEeccCcCCCC-----ccceeeECCCCCcEEEeCCCC-CC----eEEEecCCCCCCccccCEEEEE
Confidence 5221 1 222332 223433233 36777765221 11 3556666542112224776543
No 146
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.23 E-value=0.7 Score=43.16 Aligned_cols=151 Identities=9% Similarity=0.010 Sum_probs=76.3
Q ss_pred EEEEEceec-CCcEEEEEECCCCcEEeCCCCCCCccceeEEee-C---CEEEEEeeecCCCCccceEEEEeCCCCc--EE
Q 012755 207 QLLVFGREL-SGFAIWMYSLIANCWSKCPQMNLPRCLFGSSSL-G---EVAIVAGGTDKNGCILKSAELYNSELGT--WE 279 (457)
Q Consensus 207 ~lyv~GG~~-~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~---~~iyv~GG~~~~~~~~~~v~~yd~~t~~--W~ 279 (457)
.+++.|+.. ....+.+||..+++............-.+++.. + +.+++.|+.+ ..+.+||..++. -.
T Consensus 32 ~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~ 105 (357)
T 3i2n_A 32 KFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG------GNLHIWNLEAPEMPVY 105 (357)
T ss_dssp EEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT------SCEEEECTTSCSSCSE
T ss_pred eEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC------CeEEEEeCCCCCccEE
Confidence 555555431 245788999888776543222222122222222 2 4666666643 357888887764 11
Q ss_pred ECCCCCCCCcceeEE-------EECCEEEEEeccCCCCCCCceEEEEECCCCc--eEEcCCCCCCCCCCCCCCCCCCCCE
Q 012755 280 TLPDMNLPRKLCSGF-------FMDGKFYIIGGMSSPTDPLTCGEEYNLETRT--WKRIENMYPSNVGTQSNPAMSSPPL 350 (457)
Q Consensus 280 ~~~~~p~~r~~~~~~-------~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~r~~~~ 350 (457)
.+..... .-.++. .-++...+.|+.+ ..+..||+.+.. ...+..... ...+....
T Consensus 106 ~~~~~~~--~v~~~~~~~~~~~s~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~--------~~~~~v~~ 169 (357)
T 3i2n_A 106 SVKGHKE--IINAIDGIGGLGIGEGAPEIVTGSRD------GTVKVWDPRQKDDPVANMEPVQG--------ENKRDCWT 169 (357)
T ss_dssp EECCCSS--CEEEEEEESGGGCC-CCCEEEEEETT------SCEEEECTTSCSSCSEEECCCTT--------SCCCCEEE
T ss_pred EEEeccc--ceEEEeeccccccCCCccEEEEEeCC------CeEEEEeCCCCCCcceeccccCC--------CCCCceEE
Confidence 1111111 111111 1245566666543 357889988764 333322111 00111112
Q ss_pred EE-----EECCEEEEEecCCCeEEEEECCCCcEE
Q 012755 351 VA-----VVNNQLYSADQATNVVKKYNKTNNSWT 379 (457)
Q Consensus 351 ~~-----~~~g~ly~~gg~~~~v~~Yd~~~~~W~ 379 (457)
++ .-++.+++.++..+.+..||..+..=.
T Consensus 170 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 203 (357)
T 3i2n_A 170 VAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALR 203 (357)
T ss_dssp EEEECCCC-CCCEEEEEETTSEEEEEETTTTEEE
T ss_pred EEEEeccCCCCCEEEEEccCCeEEEEECccCcee
Confidence 22 147778888878889999999887643
No 147
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=95.23 E-value=0.33 Score=46.45 Aligned_cols=186 Identities=10% Similarity=0.009 Sum_probs=86.8
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCC---CCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEE
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMN---LPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWET 280 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp---~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~ 280 (457)
++.+++ ++.. ..+.+||..+++-....... ....-.+++. -+++.++.|+.+ ..+.++|..+++-..
T Consensus 105 d~~~l~-~s~d--g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d------g~v~iwd~~~~~~~~ 175 (357)
T 4g56_B 105 EKGILV-ASDS--GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD------FSVKVWDLSQKAVLK 175 (357)
T ss_dssp TTEEEE-EETT--SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT------SCEEEEETTTTEEEE
T ss_pred CCCEEE-EECC--CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC------CeEEEEECCCCcEEE
Confidence 566554 4332 35888888776533222111 1111112222 256677777654 358889998876433
Q ss_pred CCCCCCCCcce-eEEEE-CC-EEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE---
Q 012755 281 LPDMNLPRKLC-SGFFM-DG-KFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--- 354 (457)
Q Consensus 281 ~~~~p~~r~~~-~~~~~-~g-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--- 354 (457)
.- ....... +++.. ++ .+++.++.+ ..+..||+.+.+-........ .......+..
T Consensus 176 ~~--~~h~~~v~~v~~s~~~~~~~~s~~~d------g~v~~wd~~~~~~~~~~~~~~----------~~~~v~~v~~sp~ 237 (357)
T 4g56_B 176 SY--NAHSSEVNCVAACPGKDTIFLSCGED------GRILLWDTRKPKPATRIDFCA----------SDTIPTSVTWHPE 237 (357)
T ss_dssp EE--CCCSSCEEEEEECTTCSSCEEEEETT------SCEEECCTTSSSCBCBCCCTT----------CCSCEEEEEECTT
T ss_pred EE--cCCCCCEEEEEEccCCCceeeeeccC------CceEEEECCCCceeeeeeecc----------ccccccchhhhhc
Confidence 21 1111111 22222 33 355665543 347788887765332211111 1122223333
Q ss_pred CCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEE-eC-CEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 355 NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKA-CG-NSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 355 ~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~-~~-g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
++.+++.|+..+.|..||..+.+= +..+.... ..-..++. .+ +++++.|+.++ .+.+||.++.
T Consensus 238 ~~~~la~g~~d~~i~~wd~~~~~~--~~~~~~~~----~~v~~l~~sp~~~~~lasgs~D~------~i~iwd~~~~ 302 (357)
T 4g56_B 238 KDDTFACGDETGNVSLVNIKNPDS--AQTSAVHS----QNITGLAYSYHSSPFLASISEDC------TVAVLDADFS 302 (357)
T ss_dssp STTEEEEEESSSCEEEEESSCGGG--CEEECCCS----SCEEEEEECSSSSCCEEEEETTS------CEEEECTTSC
T ss_pred ccceEEEeecccceeEEECCCCcE--eEEEeccc----eeEEEEEEcCCCCCEEEEEeCCC------EEEEEECCCC
Confidence 456788888888899999876531 11111111 11112222 23 46666676653 4788888764
No 148
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.23 E-value=2 Score=40.73 Aligned_cols=182 Identities=10% Similarity=0.010 Sum_probs=96.0
Q ss_pred EEEEEceecCCcEEEEEECCCCcEEeCCCC-CCCccceeEEee--CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCC
Q 012755 207 QLLVFGRELSGFAIWMYSLIANCWSKCPQM-NLPRCLFGSSSL--GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPD 283 (457)
Q Consensus 207 ~lyv~GG~~~~~~v~~yd~~t~~W~~l~~l-p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~ 283 (457)
.+++.|+.. ..+.+||..+.+....-.. .....-.+++.. ++.+++.|+.+ ..+.++|..++....+..
T Consensus 87 ~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~ 158 (383)
T 3ei3_B 87 TTVAVGSKG--GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR------GATTLRDFSGSVIQVFAK 158 (383)
T ss_dssp TEEEEEEBT--SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT------TEEEEEETTSCEEEEEEC
T ss_pred CEEEEEcCC--CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC------CEEEEEECCCCceEEEec
Confidence 455555543 3588899988776554322 122222233333 34666666543 468889998877665543
Q ss_pred CCCCCc-ceeEEE-ECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCE-E
Q 012755 284 MNLPRK-LCSGFF-MDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQ-L 358 (457)
Q Consensus 284 ~p~~r~-~~~~~~-~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~-l 358 (457)
...... -.+++. -++++.+.|+.+ ..+..||+....-..+... ......+.. ++. +
T Consensus 159 ~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~h-------------~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 159 TDSWDYWYCCVDVSVSRQMLATGDST------GRLLLLGLDGHEIFKEKLH-------------KAKVTHAEFNPRCDWL 219 (383)
T ss_dssp CCCSSCCEEEEEEETTTTEEEEEETT------SEEEEEETTSCEEEEEECS-------------SSCEEEEEECSSCTTE
T ss_pred cCCCCCCeEEEEECCCCCEEEEECCC------CCEEEEECCCCEEEEeccC-------------CCcEEEEEECCCCCCE
Confidence 222111 122222 256666666533 4688899854433333221 111222223 444 7
Q ss_pred EEEecCCCeEEEEECCC----CcEEEeccCCCccCCCCcceEEEEE-e-CCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 359 YSADQATNVVKKYNKTN----NSWTVVKRLPVRANSFNGWGLAFKA-C-GNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 359 y~~gg~~~~v~~Yd~~~----~~W~~v~~~p~~~~~~~~~~~~~~~-~-~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
++.++..+.+..||..+ ......... . ..-..+.. - ++++++.|+.++ .+.+||..+
T Consensus 220 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~--~-----~~v~~~~~s~~~~~~l~~~~~d~------~i~iwd~~~ 282 (383)
T 3ei3_B 220 MATSSVDATVKLWDLRNIKDKNSYIAEMPH--E-----KPVNAAYFNPTDSTKLLTTDQRN------EIRVYSSYD 282 (383)
T ss_dssp EEEEETTSEEEEEEGGGCCSTTCEEEEEEC--S-----SCEEEEEECTTTSCEEEEEESSS------EEEEEETTB
T ss_pred EEEEeCCCEEEEEeCCCCCcccceEEEecC--C-----CceEEEEEcCCCCCEEEEEcCCC------cEEEEECCC
Confidence 77787888999999986 333322211 1 11111222 2 567777776653 578888765
No 149
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.19 E-value=1.9 Score=39.83 Aligned_cols=185 Identities=10% Similarity=-0.022 Sum_probs=89.3
Q ss_pred cEEEEEecCccEEEEeCCCCc----EEeCCCCCCCccccCCCeeeEEeCCE-EEEEceecCCcEEEEEEC-CCCcEEeCC
Q 012755 161 HWVYLACILMPWEAFDPLRQR----WMRLPRMQCDECFTSADKESLAVGTQ-LLVFGRELSGFAIWMYSL-IANCWSKCP 234 (457)
Q Consensus 161 ~~l~~~~~~~~~~~ydp~~~~----W~~l~~~p~~~~~~~~~~~~~~~~~~-lyv~GG~~~~~~v~~yd~-~t~~W~~l~ 234 (457)
..++..+....+..||..+.. ...+..... .........++. .++.|+.. ..+.+||. .+++-..+.
T Consensus 24 ~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~~~~~d--g~i~~wd~~~~~~~~~~~ 96 (342)
T 1yfq_A 24 SLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKH-----PLLCCNFIDNTDLQIYVGTVQ--GEILKVDLIGSPSFQALT 96 (342)
T ss_dssp TEEEEEETTSEEEEEEEETTTTEEEEEEEEECSS-----CEEEEEEEESSSEEEEEEETT--SCEEEECSSSSSSEEECB
T ss_pred CEEEEEcCCCeEEEEEeCCCCccccceeeeecCC-----ceEEEEECCCCCcEEEEEcCC--CeEEEEEeccCCceEecc
Confidence 344444445667777766554 222111000 000112233566 66666543 46899999 888776664
Q ss_pred CCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCc-------EEECCCCCCCCcceeEEEECCEEEEEeccC
Q 012755 235 QMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGT-------WETLPDMNLPRKLCSGFFMDGKFYIIGGMS 307 (457)
Q Consensus 235 ~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~-------W~~~~~~p~~r~~~~~~~~~g~iyv~GG~~ 307 (457)
..+....-.+++...+..++.|+.+ ..+.+||..+.. .+.+..+.....-.+++...+. .+.|+.
T Consensus 97 ~~~~~~~v~~l~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-l~~~~~- 168 (342)
T 1yfq_A 97 NNEANLGICRICKYGDDKLIAASWD------GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR-LIVGMN- 168 (342)
T ss_dssp SCCCCSCEEEEEEETTTEEEEEETT------SEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE-EEEEES-
T ss_pred ccCCCCceEEEEeCCCCEEEEEcCC------CeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc-EEEEeC-
Confidence 4112222222222225555566543 467778876400 2222222222222333344455 444432
Q ss_pred CCCCCCceEEEEECCC-Cc--eEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCC
Q 012755 308 SPTDPLTCGEEYNLET-RT--WKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNN 376 (457)
Q Consensus 308 ~~~~~~~~~~~yd~~t-~~--W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~ 376 (457)
...+..||..+ .. ......... .....++.. ++.+++.++..+.+..||.+..
T Consensus 169 -----d~~i~i~d~~~~~~~~~~~~~~~~~-----------~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 169 -----NSQVQWFRLPLCEDDNGTIEESGLK-----------YQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp -----TTEEEEEESSCCTTCCCEEEECSCS-----------SCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred -----CCeEEEEECCccccccceeeecCCC-----------CceeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 24688899887 33 222221111 111122222 5778888888788888777554
No 150
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.18 E-value=1.5 Score=40.54 Aligned_cols=183 Identities=9% Similarity=0.099 Sum_probs=89.1
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEE-eeCCEEEEEeeecCCCCccceEEEEeCCCCcEEE-CC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSS-SLGEVAIVAGGTDKNGCILKSAELYNSELGTWET-LP 282 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~-~~ 282 (457)
++.+++.|+. ...+.+||..++.-...-...... -.++. .-++..++.|+.+ ..+.++|..+++-.. +.
T Consensus 24 ~~~~l~s~~~--dg~v~lWd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~s~s~d------~~i~vwd~~~~~~~~~~~ 94 (304)
T 2ynn_A 24 TEPWVLTTLY--SGRVELWNYETQVEVRSIQVTETP-VRAGKFIARKNWIIVGSDD------FRIRVFNYNTGEKVVDFE 94 (304)
T ss_dssp SSSEEEEEET--TSEEEEEETTTTEEEEEEECCSSC-EEEEEEEGGGTEEEEEETT------SEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEEcC--CCcEEEEECCCCceeEEeeccCCc-EEEEEEeCCCCEEEEECCC------CEEEEEECCCCcEEEEEe
Confidence 4555555553 346888898877543211111111 11122 2255566666643 468889988776321 11
Q ss_pred CCCCCCcceeEEEE-CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE---CCEE
Q 012755 283 DMNLPRKLCSGFFM-DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV---NNQL 358 (457)
Q Consensus 283 ~~p~~r~~~~~~~~-~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~g~l 358 (457)
.- ...-.+++.. ++.+.+.|+.+ ..+..||..++. .....+.. .......+.+ ++.+
T Consensus 95 ~h--~~~v~~~~~~~~~~~l~sgs~D------~~v~lWd~~~~~-~~~~~~~~----------h~~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 95 AH--PDYIRSIAVHPTKPYVLSGSDD------LTVKLWNWENNW-ALEQTFEG----------HEHFVMCVAFNPKDPST 155 (304)
T ss_dssp CC--SSCEEEEEECSSSSEEEEEETT------SCEEEEEGGGTT-EEEEEECC----------CCSCEEEEEECTTCTTE
T ss_pred CC--CCcEEEEEEcCCCCEEEEECCC------CeEEEEECCCCc-chhhhhcc----------cCCcEEEEEECCCCCCE
Confidence 11 1111122222 45565666543 357778876642 21111111 1111122333 4567
Q ss_pred EEEecCCCeEEEEECCCCc--EEEeccCCCccCCCCcceEEEEEe----CCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 359 YSADQATNVVKKYNKTNNS--WTVVKRLPVRANSFNGWGLAFKAC----GNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 359 y~~gg~~~~v~~Yd~~~~~--W~~v~~~p~~~~~~~~~~~~~~~~----~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
++.|+..+.|..||..+.. ...... . ..+...+.. ++.+++.|+.++ .+.+||..+.
T Consensus 156 l~sgs~D~~v~iwd~~~~~~~~~~~~~--~------~~~v~~~~~~~~~~~~~l~s~s~D~------~i~iWd~~~~ 218 (304)
T 2ynn_A 156 FASGCLDRTVKVWSLGQSTPNFTLTTG--Q------ERGVNYVDYYPLPDKPYMITASDDL------TIKIWDYQTK 218 (304)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEECC--C------TTCEEEEEECCSTTCCEEEEEETTS------EEEEEETTTT
T ss_pred EEEEeCCCeEEEEECCCCCccceeccC--C------cCcEEEEEEEEcCCCCEEEEEcCCC------eEEEEeCCCC
Confidence 7788888899999986542 111110 0 011222222 456667776653 5788888763
No 151
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.16 E-value=3.5 Score=42.56 Aligned_cols=213 Identities=9% Similarity=0.035 Sum_probs=112.9
Q ss_pred cccEEEEEec-CccEEEEeC-CCC--cEEeCCCCCCCc----cccCCCeeeEE--eCCE----EEEEceecCCcEEEEEE
Q 012755 159 VEHWVYLACI-LMPWEAFDP-LRQ--RWMRLPRMQCDE----CFTSADKESLA--VGTQ----LLVFGRELSGFAIWMYS 224 (457)
Q Consensus 159 ~~~~l~~~~~-~~~~~~ydp-~~~--~W~~l~~~p~~~----~~~~~~~~~~~--~~~~----lyv~GG~~~~~~v~~yd 224 (457)
.++.+|+... ...++++|. .+. .|..-...+... +........+. .++. ||+... ...++.+|
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~---dg~l~AlD 137 (599)
T 1w6s_A 61 VDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL---DGNVAALN 137 (599)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT---TSEEEEEE
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC---CCEEEEEE
Confidence 3778898876 678999999 665 687644332110 00000112344 4666 877532 34689999
Q ss_pred CCCCc--EEeC-CCCCCC-ccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCc--EEECCCCCC------C-----
Q 012755 225 LIANC--WSKC-PQMNLP-RCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGT--WETLPDMNL------P----- 287 (457)
Q Consensus 225 ~~t~~--W~~l-~~lp~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~------~----- 287 (457)
..|++ |+.- ...... ....+-++.+++||+..+..+. .....+..||.+|++ |+.-...+. +
T Consensus 138 a~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~-g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~ 216 (599)
T 1w6s_A 138 AETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAEL-GVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIK 216 (599)
T ss_dssp TTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGG-TCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTT
T ss_pred CCCCCEEEeecCCCCCccceeecCCEEECCEEEEEeccccc-CCCCeEEEEECCCCcEEEEEcCCCCccccccccccccc
Confidence 98875 8753 221100 1111224568888774432111 123679999999886 876432111 0
Q ss_pred -----------------C-------cceeEE--EECCEEEEEeccCC---------CCCCCceEEEEECCCCc--eEEcC
Q 012755 288 -----------------R-------KLCSGF--FMDGKFYIIGGMSS---------PTDPLTCGEEYNLETRT--WKRIE 330 (457)
Q Consensus 288 -----------------r-------~~~~~~--~~~g~iyv~GG~~~---------~~~~~~~~~~yd~~t~~--W~~~~ 330 (457)
. .....+ ..++.+|+-.|... .......+.++|++|++ |+.-.
T Consensus 217 ~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~ 296 (599)
T 1w6s_A 217 NPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQK 296 (599)
T ss_dssp CGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEES
T ss_pred cccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeec
Confidence 0 000112 23678888655321 11134689999999875 77543
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEE---ECC---EEEEEecCCCeEEEEECCCCc--EEE
Q 012755 331 NMYPSNVGTQSNPAMSSPPLVAV---VNN---QLYSADQATNVVKKYNKTNNS--WTV 380 (457)
Q Consensus 331 ~~~~~~~~~~~~~~~r~~~~~~~---~~g---~ly~~gg~~~~v~~Yd~~~~~--W~~ 380 (457)
.... .........+.++- .+| .+++.+...+.++++|.++.+ |..
T Consensus 297 ~~~d-----~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 349 (599)
T 1w6s_A 297 TPHD-----EWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSAN 349 (599)
T ss_dssp STTC-----SSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCCc-----cccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecc
Confidence 2111 00000111223333 246 566666667788888887764 654
No 152
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.12 E-value=1.6 Score=41.57 Aligned_cols=195 Identities=11% Similarity=0.053 Sum_probs=92.2
Q ss_pred EEEEEceecCCcEEEEEECCCCc------EEeCCCCCCC---ccceeEEee-----CCEE-EEEeeecCCCCccceEEEE
Q 012755 207 QLLVFGRELSGFAIWMYSLIANC------WSKCPQMNLP---RCLFGSSSL-----GEVA-IVAGGTDKNGCILKSAELY 271 (457)
Q Consensus 207 ~lyv~GG~~~~~~v~~yd~~t~~------W~~l~~lp~~---r~~~~~~~~-----~~~i-yv~GG~~~~~~~~~~v~~y 271 (457)
.+++.|+.. ..+.+||..+++ +..+...+.. ..-.+++.. ++.. ++.|+.+ ..+.+|
T Consensus 82 ~~l~s~~~d--g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d------g~i~iw 153 (397)
T 1sq9_A 82 CLVATTSFS--GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK------GTTYIW 153 (397)
T ss_dssp EEEEEEETT--SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT------SCEEEE
T ss_pred cEEEEEcCC--CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC------CcEEEE
Confidence 677777653 357888887766 6666543211 112223333 4555 6666643 356777
Q ss_pred eCCC------Cc---EEECCCC--------CCCCcceeEEEE-CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCC-
Q 012755 272 NSEL------GT---WETLPDM--------NLPRKLCSGFFM-DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENM- 332 (457)
Q Consensus 272 d~~t------~~---W~~~~~~--------p~~r~~~~~~~~-~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~- 332 (457)
|..+ .. |.....+ .....-.+++.. ++ +++.|+. ...+..||+.+.+-...-..
T Consensus 154 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~------dg~i~i~d~~~~~~~~~~~~~ 226 (397)
T 1sq9_A 154 KFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFN------NGTVQISELSTLRPLYNFESQ 226 (397)
T ss_dssp EEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECT------TSEEEEEETTTTEEEEEEECC
T ss_pred eCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeC------CCcEEEEECCCCceeEEEecc
Confidence 7665 22 1110011 011111222332 46 5555543 24688899987654322111
Q ss_pred CCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCC---CeEEEEECCCCcEEEeccCCCc-c------CCCCcceEEEEE
Q 012755 333 YPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQAT---NVVKKYNKTNNSWTVVKRLPVR-A------NSFNGWGLAFKA 400 (457)
Q Consensus 333 ~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~---~~v~~Yd~~~~~W~~v~~~p~~-~------~~~~~~~~~~~~ 400 (457)
... .........+.+ ++.+++.++.. +.+..||..+.+-...-..+.. . ..+...-..+..
T Consensus 227 ~~h-------~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 299 (397)
T 1sq9_A 227 HSM-------INNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSF 299 (397)
T ss_dssp C----------CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEE
T ss_pred ccc-------cccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEE
Confidence 000 000111222333 56777777666 7899999987642221111000 0 001111122222
Q ss_pred -eCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 401 -CGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 401 -~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
-++++++.|+.++ .+.+||..+.
T Consensus 300 ~~~~~~l~~~~~dg------~i~iwd~~~~ 323 (397)
T 1sq9_A 300 NDSGETLCSAGWDG------KLRFWDVKTK 323 (397)
T ss_dssp CSSSSEEEEEETTS------EEEEEETTTT
T ss_pred CCCCCEEEEEeCCC------eEEEEEcCCC
Confidence 2567777776553 5888988763
No 153
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=95.10 E-value=1.7 Score=41.19 Aligned_cols=157 Identities=7% Similarity=0.028 Sum_probs=75.0
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEee--CCEEEEEeeecCCCCccceEEEEeCCCCcEEECC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSSL--GEVAIVAGGTDKNGCILKSAELYNSELGTWETLP 282 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~ 282 (457)
++.+++.|+. ...+.+||..+++-...-..+.+......... ++.+++.|+.+ ..+.+||..++.-...
T Consensus 111 ~~~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~v~~~d~~~~~~~~~- 181 (408)
T 4a11_B 111 DTGMFTSSSF--DKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG------PKVQLCDLKSGSCSHI- 181 (408)
T ss_dssp CTTCEEEEET--TSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESS------SSEEEEESSSSCCCEE-
T ss_pred CCcEEEEEeC--CCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCC------CeEEEEeCCCcceeee-
Confidence 4455666653 34688999988765443222222222111111 34466666643 4688889877642111
Q ss_pred CCCCCCcce-eEEEE-CCE-EEEEeccCCCCCCCceEEEEECCCCc--eEEcCCCCCCCCCC--CCCCCCCCCCEEEEE-
Q 012755 283 DMNLPRKLC-SGFFM-DGK-FYIIGGMSSPTDPLTCGEEYNLETRT--WKRIENMYPSNVGT--QSNPAMSSPPLVAVV- 354 (457)
Q Consensus 283 ~~p~~r~~~-~~~~~-~g~-iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~~~~--~~~~~~r~~~~~~~~- 354 (457)
+....... +++.. ++. +++.|+.+ ..+..||..+.. ...+.......... ............+..
T Consensus 182 -~~~~~~~v~~~~~~~~~~~ll~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 254 (408)
T 4a11_B 182 -LQGHRQEILAVSWSPRYDYILATASAD------SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFT 254 (408)
T ss_dssp -ECCCCSCEEEEEECSSCTTEEEEEETT------SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEEC
T ss_pred -ecCCCCcEEEEEECCCCCcEEEEEcCC------CcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEc
Confidence 11111111 22222 333 56666543 347788887653 22221100000000 000011122222333
Q ss_pred -CCEEEEEecCCCeEEEEECCCCc
Q 012755 355 -NNQLYSADQATNVVKKYNKTNNS 377 (457)
Q Consensus 355 -~g~ly~~gg~~~~v~~Yd~~~~~ 377 (457)
++..++.++..+.+..||..+..
T Consensus 255 ~~~~~l~~~~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 255 SDGLHLLTVGTDNRMRLWNSSNGE 278 (408)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCC
T ss_pred CCCCEEEEecCCCeEEEEECCCCc
Confidence 66677777778899999998764
No 154
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.02 E-value=0.87 Score=48.34 Aligned_cols=185 Identities=10% Similarity=0.074 Sum_probs=93.0
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeC-CCCCCCccceeEE-eeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKC-PQMNLPRCLFGSS-SLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLP 282 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l-~~lp~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~ 282 (457)
++..+++|+. ...+.+||..+++.... .....+ -.+++ .-++..+++|+.+ ..+.+||..+++....-
T Consensus 24 ~~~~la~~~~--~g~v~iwd~~~~~~~~~~~~~~~~--v~~~~~s~~~~~l~~~~~d------g~i~vw~~~~~~~~~~~ 93 (814)
T 3mkq_A 24 TEPWVLTTLY--SGRVEIWNYETQVEVRSIQVTETP--VRAGKFIARKNWIIVGSDD------FRIRVFNYNTGEKVVDF 93 (814)
T ss_dssp SSSEEEEEET--TSEEEEEETTTTEEEEEEECCSSC--EEEEEEEGGGTEEEEEETT------SEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEeC--CCEEEEEECCCCceEEEEecCCCc--EEEEEEeCCCCEEEEEeCC------CeEEEEECCCCcEEEEE
Confidence 3444455543 34688899888765332 211111 11222 2255666666643 46889999888754321
Q ss_pred CCCCCCcceeEEE-ECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCC-CEEEEE--CCEE
Q 012755 283 DMNLPRKLCSGFF-MDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSP-PLVAVV--NNQL 358 (457)
Q Consensus 283 ~~p~~r~~~~~~~-~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~-~~~~~~--~g~l 358 (457)
... ...-.+++. -++...+.|+. ...+.+||..++ |........ .... ..++.. ++.+
T Consensus 94 ~~~-~~~v~~~~~s~~~~~l~~~~~------dg~i~vw~~~~~-~~~~~~~~~----------~~~~v~~~~~~p~~~~~ 155 (814)
T 3mkq_A 94 EAH-PDYIRSIAVHPTKPYVLSGSD------DLTVKLWNWENN-WALEQTFEG----------HEHFVMCVAFNPKDPST 155 (814)
T ss_dssp ECC-SSCEEEEEECSSSSEEEEEET------TSEEEEEEGGGT-SEEEEEEEC----------CSSCEEEEEEETTEEEE
T ss_pred ecC-CCCEEEEEEeCCCCEEEEEcC------CCEEEEEECCCC-ceEEEEEcC----------CCCcEEEEEEEcCCCCE
Confidence 111 111112222 24555555543 246788998775 222221111 1111 122333 4678
Q ss_pred EEEecCCCeEEEEECCCCc--EEEeccCCCccCCCCcceEEEEEe--CCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 359 YSADQATNVVKKYNKTNNS--WTVVKRLPVRANSFNGWGLAFKAC--GNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 359 y~~gg~~~~v~~Yd~~~~~--W~~v~~~p~~~~~~~~~~~~~~~~--~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
++.++..+.|..||..+.. ........... ..++ ... ++.++++|+.++ .+.+||..+.
T Consensus 156 l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v-----~~~~-~~~~~~~~~l~~~~~dg------~i~~~d~~~~ 218 (814)
T 3mkq_A 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGV-----NYVD-YYPLPDKPYMITASDDL------TIKIWDYQTK 218 (814)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEECCCTTCC-----CEEE-ECCSTTCCEEEEECTTS------EEEEEETTTT
T ss_pred EEEEeCCCeEEEEECCCCcceeEEecCCCCCE-----EEEE-EEECCCCCEEEEEeCCC------EEEEEECCCC
Confidence 8888888899999987653 22221111111 1111 122 677777787653 5788887663
No 155
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.00 E-value=1.4 Score=42.38 Aligned_cols=197 Identities=14% Similarity=0.174 Sum_probs=93.5
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPD 283 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~ 283 (457)
++..++.|+.. ..+.+||..+++-...-.- ....-.+++.. ++..++.|+.+ ..+.++|..+++....-.
T Consensus 134 dg~~l~s~~~d--~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~d------~~v~iwd~~~~~~~~~~~ 204 (393)
T 1erj_A 134 DGKFLATGAED--RLIRIWDIENRKIVMILQG-HEQDIYSLDYFPSGDKLVSGSGD------RTVRIWDLRTGQCSLTLS 204 (393)
T ss_dssp TSSEEEEEETT--SCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEE
T ss_pred CCCEEEEEcCC--CeEEEEECCCCcEEEEEcc-CCCCEEEEEEcCCCCEEEEecCC------CcEEEEECCCCeeEEEEE
Confidence 56666666643 3688899888764332110 11111222222 45555666543 468889998877543211
Q ss_pred CCCCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEE
Q 012755 284 MNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLY 359 (457)
Q Consensus 284 ~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly 359 (457)
.. .....++.. ++++++.|+.+ ..+..||..++.-...-..... ...........+.+ +++.+
T Consensus 205 ~~--~~v~~~~~~~~~~~~l~~~s~d------~~v~iwd~~~~~~~~~~~~~~~-----~~~~h~~~v~~v~~~~~g~~l 271 (393)
T 1erj_A 205 IE--DGVTTVAVSPGDGKYIAAGSLD------RAVRVWDSETGFLVERLDSENE-----SGTGHKDSVYSVVFTRDGQSV 271 (393)
T ss_dssp CS--SCEEEEEECSTTCCEEEEEETT------SCEEEEETTTCCEEEEEC-----------CCCSSCEEEEEECTTSSEE
T ss_pred cC--CCcEEEEEECCCCCEEEEEcCC------CcEEEEECCCCcEEEeeccccc-----CCCCCCCCEEEEEECCCCCEE
Confidence 11 111222222 56777777643 3578899888764322111000 00001111222233 67777
Q ss_pred EEecCCCeEEEEECCCCcEEEeccCCCc------cCCCCcceEEEE-EeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 360 SADQATNVVKKYNKTNNSWTVVKRLPVR------ANSFNGWGLAFK-ACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 360 ~~gg~~~~v~~Yd~~~~~W~~v~~~p~~------~~~~~~~~~~~~-~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
+.|+..+.|..||..+..-......+.. ...+...-..++ .-++..++.|+.++ .+.+||..+.
T Consensus 272 ~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~------~v~iwd~~~~ 342 (393)
T 1erj_A 272 VSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR------GVLFWDKKSG 342 (393)
T ss_dssp EEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTS------EEEEEETTTC
T ss_pred EEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCC------eEEEEECCCC
Confidence 7888888999999875422111000000 000111111222 22566667776653 5888998774
No 156
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=94.97 E-value=2.4 Score=39.67 Aligned_cols=214 Identities=9% Similarity=0.011 Sum_probs=115.3
Q ss_pred cCccEEEEeCCCCcEEeCC-CCCCCccccCCCeeeEE--eCCEEEEEceecCCcEEEEEECCC----CcEEe-CC-CCCC
Q 012755 168 ILMPWEAFDPLRQRWMRLP-RMQCDECFTSADKESLA--VGTQLLVFGRELSGFAIWMYSLIA----NCWSK-CP-QMNL 238 (457)
Q Consensus 168 ~~~~~~~ydp~~~~W~~l~-~~p~~~~~~~~~~~~~~--~~~~lyv~GG~~~~~~v~~yd~~t----~~W~~-l~-~lp~ 238 (457)
..+.+..+|+.......+- .+..+ ..++. .++.||+... ....++++++.+ ..-.. ++ .+..
T Consensus 8 ~~~~I~~i~~~~~~~~~~~~~~~~p-------~g~~~d~~~~~ly~~D~--~~~~I~~~~~~g~~~~~~~~~~~~~~~~~ 78 (316)
T 1ijq_A 8 NRHEVRKMTLDRSEYTSLIPNLRNV-------VALDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISRDIQA 78 (316)
T ss_dssp CBSSEEEEETTSCCCEEEECSCSSE-------EEEEEETTTTEEEEEET--TTTEEEEEEC--------CEEEECSSCSC
T ss_pred CCCeEEEEECCCcceEehhcCCCce-------EEEEEEeCCCEEEEEEC--CCCcEEEEECCCCCCCcccEEEEeCCCCC
Confidence 3567788888877655432 22111 11222 2578998753 345789999876 22222 22 2222
Q ss_pred CccceeEEe--eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECC--CCCCCCcceeEEEE--CCEEEEEeccCCCCCC
Q 012755 239 PRCLFGSSS--LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLP--DMNLPRKLCSGFFM--DGKFYIIGGMSSPTDP 312 (457)
Q Consensus 239 ~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~--~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~ 312 (457)
| .++++ .++.||+.-. ....++++|+....-+.+. .+..| ..+++- ++.||+..-. .
T Consensus 79 p---~glavd~~~~~ly~~d~------~~~~I~~~~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~-----~ 141 (316)
T 1ijq_A 79 P---DGLAVDWIHSNIYWTDS------VLGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG-----T 141 (316)
T ss_dssp C---CEEEEETTTTEEEEEET------TTTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECS-----S
T ss_pred c---CEEEEeecCCeEEEEEC------CCCEEEEEeCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccC-----C
Confidence 2 33443 4789999732 1357889998765433332 22222 233443 6899997521 1
Q ss_pred CceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCC
Q 012755 313 LTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANS 390 (457)
Q Consensus 313 ~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~ 390 (457)
...++++++....-+.+... . .....++++- +++||+.....+.|+++|++...=+.+...+....
T Consensus 142 ~~~I~~~~~dG~~~~~~~~~-~----------~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~- 209 (316)
T 1ijq_A 142 PAKIKKGGLNGVDIYSLVTE-N----------IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLA- 209 (316)
T ss_dssp SCEEEEEETTSCCEEEEECS-S----------CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTS-
T ss_pred CCeEEEEcCCCCCeEEEEEC-C----------CCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccC-
Confidence 25788998865443333211 1 1122244444 68999999888899999998643333322211111
Q ss_pred CCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 391 FNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 391 ~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
.-.+++..++.||+.--.. ..|..+++.+
T Consensus 210 ---~P~giav~~~~ly~~d~~~------~~V~~~~~~~ 238 (316)
T 1ijq_A 210 ---HPFSLAVFEDKVFWTDIIN------EAIFSANRLT 238 (316)
T ss_dssp ---SEEEEEEETTEEEEEETTT------TEEEEEETTT
T ss_pred ---CcEEEEEECCEEEEEECCC------CeEEEEeCCC
Confidence 1123445688999875322 1466677654
No 157
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=94.93 E-value=2 Score=39.98 Aligned_cols=232 Identities=9% Similarity=0.000 Sum_probs=117.4
Q ss_pred EEEEecCccEEEEeCCCCcEEeCCCCCCC------------c--cccCCCeeeEEe--CCEEEEEceecCCcEEEEEECC
Q 012755 163 VYLACILMPWEAFDPLRQRWMRLPRMQCD------------E--CFTSADKESLAV--GTQLLVFGRELSGFAIWMYSLI 226 (457)
Q Consensus 163 l~~~~~~~~~~~ydp~~~~W~~l~~~p~~------------~--~~~~~~~~~~~~--~~~lyv~GG~~~~~~v~~yd~~ 226 (457)
+|+......++.||+....+..+...... . ........++.. ++.|||.... ..+.++|+.
T Consensus 33 l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~---~~i~~~d~~ 109 (322)
T 2fp8_A 33 FYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY---YHLSVVGSE 109 (322)
T ss_dssp EEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT---TEEEEECTT
T ss_pred EEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC---CCEEEEeCC
Confidence 66655567788999987766543211000 0 000011223333 5789986321 348889988
Q ss_pred CCcEEeCCCCCCC---ccceeEEe-e-CCEEEEEeeecCC-----------CCccceEEEEeCCCCcEEECC-CCCCCCc
Q 012755 227 ANCWSKCPQMNLP---RCLFGSSS-L-GEVAIVAGGTDKN-----------GCILKSAELYNSELGTWETLP-DMNLPRK 289 (457)
Q Consensus 227 t~~W~~l~~lp~~---r~~~~~~~-~-~~~iyv~GG~~~~-----------~~~~~~v~~yd~~t~~W~~~~-~~p~~r~ 289 (457)
++..+.+...... .....+++ - ++.||+.-..... ......+++||+.+++.+.+. .+..+
T Consensus 110 ~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p-- 187 (322)
T 2fp8_A 110 GGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVP-- 187 (322)
T ss_dssp CEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCC--
T ss_pred CCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccC--
Confidence 7765544321111 11122333 2 5789987422100 012357899999888765432 11111
Q ss_pred ceeEEEE-CC-EEEEEeccCCCCCCCceEEEEECCCC---ceEEcCCCCCCCCCCCCCCCCCCCCEEEE-ECCEEEEEec
Q 012755 290 LCSGFFM-DG-KFYIIGGMSSPTDPLTCGEEYNLETR---TWKRIENMYPSNVGTQSNPAMSSPPLVAV-VNNQLYSADQ 363 (457)
Q Consensus 290 ~~~~~~~-~g-~iyv~GG~~~~~~~~~~~~~yd~~t~---~W~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~g~ly~~gg 363 (457)
...+.- +| .||+.... ...+.+||+.+. ..+.+... + . ...+++ -+|.||+...
T Consensus 188 -~gia~~~dg~~lyv~d~~------~~~I~~~~~~~~~~~~~~~~~~~-~----------g--P~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 188 -GGAEVSADSSFVLVAEFL------SHQIVKYWLEGPKKGTAEVLVKI-P----------N--PGNIKRNADGHFWVSSS 247 (322)
T ss_dssp -CEEEECTTSSEEEEEEGG------GTEEEEEESSSTTTTCEEEEEEC-S----------S--EEEEEECTTSCEEEEEE
T ss_pred -cceEECCCCCEEEEEeCC------CCeEEEEECCCCcCCccceEEeC-C----------C--CCCeEECCCCCEEEEec
Confidence 122332 34 58887421 357889998753 33333221 1 1 112322 2578998864
Q ss_pred C----------CCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 364 A----------TNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 364 ~----------~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
. .+.|.+||++...-..+. .|...... . ...++..+++|||.+... ..+.+|++..
T Consensus 248 ~~~~~~~~~~~~~~v~~~d~~G~~~~~~~-~~~g~~~~-~-~~~~~~~~g~L~v~~~~~------~~i~~~~~~~ 313 (322)
T 2fp8_A 248 EELDGNMHGRVDPKGIKFDEFGNILEVIP-LPPPFAGE-H-FEQIQEHDGLLYIGTLFH------GSVGILVYDK 313 (322)
T ss_dssp EETTSSTTSCEEEEEEEECTTSCEEEEEE-CCTTTTTS-C-CCEEEEETTEEEEECSSC------SEEEEEEC--
T ss_pred CcccccccCCCccEEEEECCCCCEEEEEE-CCCCCccc-c-ceEEEEeCCEEEEeecCC------CceEEEeccc
Confidence 3 357999999765444443 22211111 1 122344689999875432 1477777764
No 158
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=94.92 E-value=1.7 Score=41.54 Aligned_cols=191 Identities=10% Similarity=0.027 Sum_probs=95.3
Q ss_pred CEEEEEceecCCcEEEEEECCCCc------EE-eCCCCC-CCccceeEEee-C-CEEEEEeeecCCCCccceEEEEeCCC
Q 012755 206 TQLLVFGRELSGFAIWMYSLIANC------WS-KCPQMN-LPRCLFGSSSL-G-EVAIVAGGTDKNGCILKSAELYNSEL 275 (457)
Q Consensus 206 ~~lyv~GG~~~~~~v~~yd~~t~~------W~-~l~~lp-~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~v~~yd~~t 275 (457)
+.+++.|+.. ..+.+||..+.+ -. .+.... ....-.+++.. + +.+++.|+.+ ..+.+||..+
T Consensus 126 ~~~l~s~~~d--g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------g~v~iwd~~~ 197 (416)
T 2pm9_A 126 DNVLASGGNN--GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS------NFASIWDLKA 197 (416)
T ss_dssp TTBEEEECSS--SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS------SCEEEEETTT
T ss_pred CCEEEEEcCC--CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC------CCEEEEECCC
Confidence 5566666543 358888988765 11 111111 11111222222 2 5677777643 4588999988
Q ss_pred CcEEECCCCCC-----CCcceeEEEE-CC-EEEEEeccCCCCCCCceEEEEECCCCceEEcCCCC-CCCCCCCCCCCCCC
Q 012755 276 GTWETLPDMNL-----PRKLCSGFFM-DG-KFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMY-PSNVGTQSNPAMSS 347 (457)
Q Consensus 276 ~~W~~~~~~p~-----~r~~~~~~~~-~g-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~-~~~~~~~~~~~~r~ 347 (457)
++-...-.... ...-.+++.. ++ .+++.|+.++. ...+..||..+..- .+..+. . ...
T Consensus 198 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~---~~~i~~~d~~~~~~-~~~~~~~~----------~~~ 263 (416)
T 2pm9_A 198 KKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN---DPSILIWDLRNANT-PLQTLNQG----------HQK 263 (416)
T ss_dssp TEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS---SCCCCEEETTSTTS-CSBCCCSC----------CSS
T ss_pred CCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC---CceEEEEeCCCCCC-CcEEeecC----------ccC
Confidence 77543322221 1112222222 33 46666654321 12567799877531 111111 1 112
Q ss_pred CCEEEEE---CCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCC-EEEEEcCcCCCCCceEEEEE
Q 012755 348 PPLVAVV---NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGN-SLLVIGGHRELQGEIIVLHS 423 (457)
Q Consensus 348 ~~~~~~~---~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g-~lyv~GG~~~~~~~~~~v~~ 423 (457)
....+.. ++.+++.++..+.+..||..+.+-.. .+...... -..++. .-++ .+++.|+.++ .+.+
T Consensus 264 ~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~--~~~~~~~~--v~~~~~-s~~~~~~l~s~~~d~------~i~i 332 (416)
T 2pm9_A 264 GILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLS--QFPARGNW--CFKTKF-APEAPDLFACASFDN------KIEV 332 (416)
T ss_dssp CEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEE--EEECSSSC--CCCEEE-CTTCTTEEEECCSSS------EEEE
T ss_pred ceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccce--eecCCCCc--eEEEEE-CCCCCCEEEEEecCC------cEEE
Confidence 2223333 67788888888899999998764322 22111110 111221 2244 6888887763 5778
Q ss_pred eeCCCC
Q 012755 424 WDPTDG 429 (457)
Q Consensus 424 y~~~~~ 429 (457)
|+....
T Consensus 333 w~~~~~ 338 (416)
T 2pm9_A 333 QTLQNL 338 (416)
T ss_dssp EESCCC
T ss_pred EEccCC
Confidence 887653
No 159
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=94.83 E-value=0.3 Score=45.68 Aligned_cols=199 Identities=12% Similarity=0.163 Sum_probs=93.5
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCC-CCccceeEEee---CCEEEEEeeecCCCCccceEEEEeCCCCcEEE
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMN-LPRCLFGSSSL---GEVAIVAGGTDKNGCILKSAELYNSELGTWET 280 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp-~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~ 280 (457)
++..++.|+.+ ..+.+||..+++...+..+. ....-.+++.. ++.+++.|+.+ ..+.++|..++.|..
T Consensus 24 ~g~~lasgs~D--~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D------~~v~iWd~~~~~~~~ 95 (316)
T 3bg1_A 24 YGTRLATCSSD--RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD------RKVIIWREENGTWEK 95 (316)
T ss_dssp GGCEEEEEETT--TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT------SCEEEECCSSSCCCE
T ss_pred CCCEEEEEeCC--CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC------CEEEEEECCCCcceE
Confidence 45555556543 35777887766433222221 11111222221 25666667654 457889998877654
Q ss_pred CCCCCCCCcceeEEEE--C--CEEEEEeccCCCCCCCceEEEEECCCC-ceEEcCCCCCCCCCC---CCCCCCCCCCEEE
Q 012755 281 LPDMNLPRKLCSGFFM--D--GKFYIIGGMSSPTDPLTCGEEYNLETR-TWKRIENMYPSNVGT---QSNPAMSSPPLVA 352 (457)
Q Consensus 281 ~~~~p~~r~~~~~~~~--~--g~iyv~GG~~~~~~~~~~~~~yd~~t~-~W~~~~~~~~~~~~~---~~~~~~r~~~~~~ 352 (457)
+..+.........+.+ + +.+.+.|+.+ ..+..||..+. .|...........+. ...|.........
T Consensus 96 ~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D------~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 169 (316)
T 3bg1_A 96 SHEHAGHDSSVNSVCWAPHDYGLILACGSSD------GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLID 169 (316)
T ss_dssp EEEECCCSSCCCEEEECCTTTCSCEEEECSS------SCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC-----
T ss_pred EEEccCCCCceEEEEECCCCCCcEEEEEcCC------CCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccc
Confidence 4322211111122222 2 5566666543 34677887765 575433221100000 0000000000000
Q ss_pred ------EECCEEEEEecCCCeEEEEECCC-CcEEEeccCCCccCCCCcceEEEEEe--C----CEEEEEcCcCCCCCceE
Q 012755 353 ------VVNNQLYSADQATNVVKKYNKTN-NSWTVVKRLPVRANSFNGWGLAFKAC--G----NSLLVIGGHRELQGEII 419 (457)
Q Consensus 353 ------~~~g~ly~~gg~~~~v~~Yd~~~-~~W~~v~~~p~~~~~~~~~~~~~~~~--~----g~lyv~GG~~~~~~~~~ 419 (457)
..++++++.|+..+.|..||..+ +.|+.+..+.... .. +..+.. + +.+++.|+.++
T Consensus 170 ~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~----~~-V~~v~~sp~~~~~~~~las~s~D~------ 238 (316)
T 3bg1_A 170 HPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHS----DW-VRDVAWAPSIGLPTSTIASCSQDG------ 238 (316)
T ss_dssp -CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCS----SC-EEEEECCCCSSCSCCEEEEEETTC------
T ss_pred cccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCC----Cc-eEEEEecCCCCCCCceEEEEcCCC------
Confidence 00135666777777888898864 4687766554322 11 111222 2 25666676653
Q ss_pred EEEEeeCCC
Q 012755 420 VLHSWDPTD 428 (457)
Q Consensus 420 ~v~~y~~~~ 428 (457)
.+.+|+.++
T Consensus 239 ~v~iw~~~~ 247 (316)
T 3bg1_A 239 RVFIWTCDD 247 (316)
T ss_dssp EEEEEECSS
T ss_pred eEEEEEccC
Confidence 577787765
No 160
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=94.78 E-value=1 Score=41.55 Aligned_cols=108 Identities=13% Similarity=0.059 Sum_probs=53.2
Q ss_pred cEEEEEec-CccEEEEeCCCCcEEeCCCCCCCc-cccCCCeeeEEeCC-EEEEEcee-------c--CCcEEEEEECCCC
Q 012755 161 HWVYLACI-LMPWEAFDPLRQRWMRLPRMQCDE-CFTSADKESLAVGT-QLLVFGRE-------L--SGFAIWMYSLIAN 228 (457)
Q Consensus 161 ~~l~~~~~-~~~~~~ydp~~~~W~~l~~~p~~~-~~~~~~~~~~~~~~-~lyv~GG~-------~--~~~~v~~yd~~t~ 228 (457)
..+|+... ...+..+|+.+.+-...-..+.+. .........+..++ .+|+.... . ....+.+||..++
T Consensus 46 ~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~ 125 (337)
T 1pby_B 46 RIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETL 125 (337)
T ss_dssp SEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTT
T ss_pred CEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCC
Confidence 35666544 457888998776543211111100 00000011222334 67766411 1 3468999999887
Q ss_pred cEEeCCCCCCCccceeEEe--eCCEEEEEeeecCCCCccceEEEEeCCCCcEE
Q 012755 229 CWSKCPQMNLPRCLFGSSS--LGEVAIVAGGTDKNGCILKSAELYNSELGTWE 279 (457)
Q Consensus 229 ~W~~l~~lp~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~ 279 (457)
+....-+.. .....++. -+..+|+.+ ..+.++|+.+++-.
T Consensus 126 ~~~~~~~~~--~~~~~~~~s~dg~~l~~~~---------~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 126 SRRKAFEAP--RQITMLAWARDGSKLYGLG---------RDLHVMDPEAGTLV 167 (337)
T ss_dssp EEEEEEECC--SSCCCEEECTTSSCEEEES---------SSEEEEETTTTEEE
T ss_pred cEEEEEeCC--CCcceeEECCCCCEEEEeC---------CeEEEEECCCCcEe
Confidence 654321111 11122222 234576651 35889999888743
No 161
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=94.75 E-value=2.5 Score=38.75 Aligned_cols=147 Identities=9% Similarity=0.059 Sum_probs=71.2
Q ss_pred CEEEEEceecCCcEEEEEECCCC-------cEEeCCCCCCCc-cceeEEee-C--CEEEEEeeecCCCCccceEEEEeCC
Q 012755 206 TQLLVFGRELSGFAIWMYSLIAN-------CWSKCPQMNLPR-CLFGSSSL-G--EVAIVAGGTDKNGCILKSAELYNSE 274 (457)
Q Consensus 206 ~~lyv~GG~~~~~~v~~yd~~t~-------~W~~l~~lp~~r-~~~~~~~~-~--~~iyv~GG~~~~~~~~~~v~~yd~~ 274 (457)
+.+++.|+.+. .+.+||..++ .|..+..+.... .-.+++.. + +.+++.|+.+ ..+.+||..
T Consensus 71 ~~~l~s~~~dg--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d------g~v~iwd~~ 142 (351)
T 3f3f_A 71 GRIIASASYDK--TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND------GILRLYDAL 142 (351)
T ss_dssp CSEEEEEETTS--CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT------CEEEEEECS
T ss_pred CCEEEEEcCCC--eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC------CcEEEecCC
Confidence 56666666543 5777777654 233322221111 11222222 2 5666666643 468888987
Q ss_pred CCc----EEEC-----CCC-CCCC-cceeEEEE-----CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCC
Q 012755 275 LGT----WETL-----PDM-NLPR-KLCSGFFM-----DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVG 338 (457)
Q Consensus 275 t~~----W~~~-----~~~-p~~r-~~~~~~~~-----~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 338 (457)
+.+ |... ... +... ........ ++.+++.|+.+ ..+..++........+..+..
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~------~~~~~~~~~~~~~~~~~~~~~---- 212 (351)
T 3f3f_A 143 EPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALE------QAIIYQRGKDGKLHVAAKLPG---- 212 (351)
T ss_dssp STTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETT------EEEEEEECTTSCEEEEEECCC----
T ss_pred ChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCC------CcEEEEccCCCceeeeeecCC----
Confidence 654 3211 111 1111 11112222 25566666533 234556666666654443322
Q ss_pred CCCCCCCCCCCEEEEE--CC----EEEEEecCCCeEEEEECCCC
Q 012755 339 TQSNPAMSSPPLVAVV--NN----QLYSADQATNVVKKYNKTNN 376 (457)
Q Consensus 339 ~~~~~~~r~~~~~~~~--~g----~ly~~gg~~~~v~~Yd~~~~ 376 (457)
.......+.. ++ .+++.|+..+.|..||..+.
T Consensus 213 ------h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 213 ------HKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp ------CCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred ------CCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence 1122222222 44 77888877788999988653
No 162
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.72 E-value=3.1 Score=39.74 Aligned_cols=232 Identities=13% Similarity=0.155 Sum_probs=110.5
Q ss_pred cEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCc
Q 012755 161 HWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPR 240 (457)
Q Consensus 161 ~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r 240 (457)
..|...+....+..+|..+.+-...-....+... ......++..++.||.+. .+.+||..+..-.. ..++..+
T Consensus 79 ~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~----~~~~s~~g~~las~~~d~--~v~iw~~~~~~~~~-~~~~~~~ 151 (380)
T 3iz6_a 79 NWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVM----ECAFAPNGQSVACGGLDS--ACSIFNLSSQADRD-GNMPVSR 151 (380)
T ss_dssp SCEEEEETTSEEEEEETTTTEEEEEEECCCTTCC----CCEECTTSSEEEECCSSS--CCEEEECCCCSSCC-CSSTTCC
T ss_pred CEEEEEeCCCeEEEEECCCCccceEEecCCCCEE----EEEECCCCCEEEEeeCCC--cEEEEECCCCcccc-CCcccee
Confidence 3444444456677888776643221111111111 112344667777777654 45666665432111 1111111
Q ss_pred --ccee-----EEee--CCEEEEEeeecCCCCccceEEEEeCCCCcEEEC--CCCCCCCc-ceeEEEE---CCEEEEEec
Q 012755 241 --CLFG-----SSSL--GEVAIVAGGTDKNGCILKSAELYNSELGTWETL--PDMNLPRK-LCSGFFM---DGKFYIIGG 305 (457)
Q Consensus 241 --~~~~-----~~~~--~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~--~~~p~~r~-~~~~~~~---~g~iyv~GG 305 (457)
.+|. +... ++..++.|+.+ ..+.++|..++.-... ...+.... ....+.+ ++.+++.|+
T Consensus 152 ~~~gh~~~v~~~~~~~~~~~~l~s~s~D------~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs 225 (380)
T 3iz6_a 152 VLTGHKGYASSCQYVPDQETRLITGSGD------QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGS 225 (380)
T ss_dssp BCCCCSSCCCCCBCCSSSSSCEEEECTT------SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEE
T ss_pred eccCCCcceEEEEEecCCCCEEEEECCC------CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEE
Confidence 1111 1111 23344555533 4688899988775432 12222211 1112222 567777776
Q ss_pred cCCCCCCCceEEEEECCCC--ceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEEec
Q 012755 306 MSSPTDPLTCGEEYNLETR--TWKRIENMYPSNVGTQSNPAMSSPPLVAVV-NNQLYSADQATNVVKKYNKTNNSWTVVK 382 (457)
Q Consensus 306 ~~~~~~~~~~~~~yd~~t~--~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~g~ly~~gg~~~~v~~Yd~~~~~W~~v~ 382 (457)
.+ ..+..||+... .-..+... .....+++.. ++..++.|+..+.+..||..++.-..+-
T Consensus 226 ~D------~~v~~wd~~~~~~~~~~~~~h------------~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 287 (380)
T 3iz6_a 226 CD------TTVRLWDLRITSRAVRTYHGH------------EGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVY 287 (380)
T ss_dssp TT------SCEEEEETTTTCCCCEEECCC------------SSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEE
T ss_pred CC------CeEEEEECCCCCcceEEECCc------------CCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEe
Confidence 54 35778888632 11222111 0111122222 6777888888889999999887543332
Q ss_pred cC-CCccCCCC-cceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 383 RL-PVRANSFN-GWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 383 ~~-p~~~~~~~-~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
.. +....... .........+|++++.|+.++ .+.+||....
T Consensus 288 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg------~i~vwd~~~~ 330 (380)
T 3iz6_a 288 NREPDRNDNELPIVTSVAFSISGRLLFAGYSNG------DCYVWDTLLA 330 (380)
T ss_dssp CCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS------CEEEEETTTC
T ss_pred cccccccccccCceEEEEECCCCCEEEEEECCC------CEEEEECCCC
Confidence 11 11110000 011122234777888887654 4888988663
No 163
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=94.65 E-value=2.7 Score=38.85 Aligned_cols=191 Identities=11% Similarity=-0.016 Sum_probs=99.4
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPD 283 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~ 283 (457)
++.||+... ....++++|+.++.-..+. .+ ..-++++.- ++++||...... ...+..||+.+++.+.+..
T Consensus 42 ~g~lyv~d~--~~~~I~~~d~~g~~~~~~~-~~--~~p~gia~~~dG~l~vad~~~~----~~~v~~~d~~~g~~~~~~~ 112 (306)
T 2p4o_A 42 DGTIFVTNH--EVGEIVSITPDGNQQIHAT-VE--GKVSGLAFTSNGDLVATGWNAD----SIPVVSLVKSDGTVETLLT 112 (306)
T ss_dssp TSCEEEEET--TTTEEEEECTTCCEEEEEE-CS--SEEEEEEECTTSCEEEEEECTT----SCEEEEEECTTSCEEEEEE
T ss_pred CCCEEEEeC--CCCeEEEECCCCceEEEEe-CC--CCceeEEEcCCCcEEEEeccCC----cceEEEEcCCCCeEEEEEe
Confidence 567887642 3457899998765322111 11 122334333 677888753221 1358889999988876655
Q ss_pred CCCCCcceeEEE-ECCEEEEEeccCCCCCCCceEEEEECCCCc---eEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEE
Q 012755 284 MNLPRKLCSGFF-MDGKFYIIGGMSSPTDPLTCGEEYNLETRT---WKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLY 359 (457)
Q Consensus 284 ~p~~r~~~~~~~-~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~---W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly 359 (457)
.+..+.....+. .++.+|+... ....++++|+.+.. |..-..+... .. ........++..-++.||
T Consensus 113 ~~~~~~~~g~~~~~~~~~~v~d~------~~g~i~~~d~~~~~~~v~~~~~~~~~~---~~-~~~~~~pngis~dg~~ly 182 (306)
T 2p4o_A 113 LPDAIFLNGITPLSDTQYLTADS------YRGAIWLIDVVQPSGSIWLEHPMLARS---NS-ESVFPAANGLKRFGNFLY 182 (306)
T ss_dssp CTTCSCEEEEEESSSSEEEEEET------TTTEEEEEETTTTEEEEEEECGGGSCS---ST-TCCSCSEEEEEEETTEEE
T ss_pred CCCccccCcccccCCCcEEEEEC------CCCeEEEEeCCCCcEeEEEECCccccc---cc-cCCCCcCCCcCcCCCEEE
Confidence 444444333332 2556787632 13478999987642 2211110000 00 000111223333356899
Q ss_pred EEecCCCeEEEEECCC-CcE---EEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCC
Q 012755 360 SADQATNVVKKYNKTN-NSW---TVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPT 427 (457)
Q Consensus 360 ~~gg~~~~v~~Yd~~~-~~W---~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~ 427 (457)
+.....+.|++||++. .+. +.+.....+ .++++ .-+|+|||.-... ..|.+|+++
T Consensus 183 v~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P------~gi~v-d~dG~l~va~~~~------~~V~~~~~~ 241 (306)
T 2p4o_A 183 VSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNI------DDFAF-DVEGNLYGATHIY------NSVVRIAPD 241 (306)
T ss_dssp EEETTTTEEEEEEBCTTSCBCCCEEEEESCCC------SSEEE-BTTCCEEEECBTT------CCEEEECTT
T ss_pred EEeCCCCEEEEEEeCCCCCCCccEEEeccCCC------CCeEE-CCCCCEEEEeCCC------CeEEEECCC
Confidence 9987788999999875 221 222212111 12322 3467888865322 147778885
No 164
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=94.51 E-value=3.1 Score=38.89 Aligned_cols=191 Identities=10% Similarity=-0.013 Sum_probs=96.7
Q ss_pred cEEEEEe-cCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCC-
Q 012755 161 HWVYLAC-ILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNL- 238 (457)
Q Consensus 161 ~~l~~~~-~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~- 238 (457)
..+|++. ....++.||+.+++...+. .+.. .. ......++.+++.. ...+++||+.+++.+.+...+.
T Consensus 61 ~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~--v~---~i~~~~dg~l~v~~----~~gl~~~d~~~g~~~~~~~~~~~ 130 (326)
T 2ghs_A 61 GTAWWFNILERELHELHLASGRKTVHA-LPFM--GS---ALAKISDSKQLIAS----DDGLFLRDTATGVLTLHAELESD 130 (326)
T ss_dssp TEEEEEEGGGTEEEEEETTTTEEEEEE-CSSC--EE---EEEEEETTEEEEEE----TTEEEEEETTTCCEEEEECSSTT
T ss_pred CEEEEEECCCCEEEEEECCCCcEEEEE-CCCc--ce---EEEEeCCCeEEEEE----CCCEEEEECCCCcEEEEeeCCCC
Confidence 4555554 2467889999877654432 2211 01 11234578887754 2359999999998876643321
Q ss_pred ---CccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE-CC-EEEEEeccCCCCCCC
Q 012755 239 ---PRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM-DG-KFYIIGGMSSPTDPL 313 (457)
Q Consensus 239 ---~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g-~iyv~GG~~~~~~~~ 313 (457)
.+.......-++++|+.............+++|| +++.+.+..- .......+.. ++ .+|+... ..
T Consensus 131 ~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~--~~~~~~i~~s~dg~~lyv~~~------~~ 200 (326)
T 2ghs_A 131 LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFAD--ISIPNSICFSPDGTTGYFVDT------KV 200 (326)
T ss_dssp CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEE--ESSEEEEEECTTSCEEEEEET------TT
T ss_pred CCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCC--CcccCCeEEcCCCCEEEEEEC------CC
Confidence 1212122223677876432211112245788898 5665544210 0011122222 45 5787642 13
Q ss_pred ceEEEEECC--CC-ceE---EcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEe
Q 012755 314 TCGEEYNLE--TR-TWK---RIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSWTVV 381 (457)
Q Consensus 314 ~~~~~yd~~--t~-~W~---~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~~v 381 (457)
..+++||.. ++ ... .+..... ....+....+ +|.||+.....+.|.+||++...-..+
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~----------~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~~~~~i 266 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDSTG----------IKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARY 266 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEECTT----------SSSEEEEEEECTTSCEEEEEETTTEEEEECTTCCEEEEE
T ss_pred CEEEEEEcccccCCcccCceEEEECCC----------CCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCCEEEEE
Confidence 578889875 44 211 1111110 0011122333 678888764457899999965443333
No 165
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=94.50 E-value=0.78 Score=43.37 Aligned_cols=149 Identities=7% Similarity=0.102 Sum_probs=79.5
Q ss_pred CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCC-CcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCc
Q 012755 249 GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLP-RKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRT 325 (457)
Q Consensus 249 ~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~-r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~ 325 (457)
++++++.||.+ ..+.++|..++.|.....+... ......+.. +++..+.|+.+ ..+..||..++.
T Consensus 27 ~g~~las~~~D------~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D------~~v~iw~~~~~~ 94 (345)
T 3fm0_A 27 AGTLLASCGGD------RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD------ATTCIWKKNQDD 94 (345)
T ss_dssp TSSCEEEEETT------SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT------SCEEEEEECCC-
T ss_pred CCCEEEEEcCC------CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC------CcEEEEEccCCC
Confidence 56677777754 3577888888877533221111 111122222 56666666643 346778888777
Q ss_pred eEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCC-cEEEeccCCCccCCCCcceEEEE-Ee
Q 012755 326 WKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNN-SWTVVKRLPVRANSFNGWGLAFK-AC 401 (457)
Q Consensus 326 W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~-~W~~v~~~p~~~~~~~~~~~~~~-~~ 401 (457)
+..+..+.. .......+.. ++++++.|+..+.+..||..+. .+..+..+..... .-..++ .-
T Consensus 95 ~~~~~~~~~----------h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~----~v~~~~~~p 160 (345)
T 3fm0_A 95 FECVTTLEG----------HENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQ----DVKHVVWHP 160 (345)
T ss_dssp EEEEEEECC----------CSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCS----CEEEEEECS
T ss_pred eEEEEEccC----------CCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCC----CeEEEEECC
Confidence 665543322 1122222333 6777788888889999998764 4444433222111 111111 22
Q ss_pred CCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 402 GNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 402 ~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
++.+++.|+.++ .+.+||.+.+
T Consensus 161 ~~~~l~s~s~d~------~i~~w~~~~~ 182 (345)
T 3fm0_A 161 SQELLASASYDD------TVKLYREEED 182 (345)
T ss_dssp SSSCEEEEETTS------CEEEEEEETT
T ss_pred CCCEEEEEeCCC------cEEEEEecCC
Confidence 566777776653 3666776654
No 166
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.47 E-value=0.45 Score=48.60 Aligned_cols=240 Identities=10% Similarity=-0.033 Sum_probs=115.1
Q ss_pred ccEEEEEecCccEEEEeC--CCCcEEeCCCCCCCccccCCCeeeEEe----CC-EEEEEceecCCcEEEEEECCCCcEEe
Q 012755 160 EHWVYLACILMPWEAFDP--LRQRWMRLPRMQCDECFTSADKESLAV----GT-QLLVFGRELSGFAIWMYSLIANCWSK 232 (457)
Q Consensus 160 ~~~l~~~~~~~~~~~ydp--~~~~W~~l~~~p~~~~~~~~~~~~~~~----~~-~lyv~GG~~~~~~v~~yd~~t~~W~~ 232 (457)
...+|+.+..+.+..||. .+.+- +..++...... ...+.. ++ .+|+.... ...+.++|..+.+-..
T Consensus 190 g~~l~v~~~d~~V~v~D~~~~t~~~--~~~i~~g~~p~---~va~sp~~~~dg~~l~v~~~~--~~~v~v~D~~t~~~~~ 262 (543)
T 1nir_A 190 GRYLLVIGRDARIDMIDLWAKEPTK--VAEIKIGIEAR---SVESSKFKGYEDRYTIAGAYW--PPQFAIMDGETLEPKQ 262 (543)
T ss_dssp SCEEEEEETTSEEEEEETTSSSCEE--EEEEECCSEEE---EEEECCSTTCTTTEEEEEEEE--SSEEEEEETTTCCEEE
T ss_pred CCEEEEECCCCeEEEEECcCCCCcE--EEEEecCCCcc---eEEeCCCcCCCCCEEEEEEcc--CCeEEEEeccccccce
Confidence 457787776788999999 44432 22222111111 112333 34 55554322 3468889988776433
Q ss_pred -CCC--C--------CCCccceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEE-ECCE
Q 012755 233 -CPQ--M--------NLPRCLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFF-MDGK 299 (457)
Q Consensus 233 -l~~--l--------p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~g~ 299 (457)
++. + +.+|.......- +..+|+... . ...+.++|..+.+-..+..++..+.-+..+. -+|+
T Consensus 263 ~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~-~-----~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~ 336 (543)
T 1nir_A 263 IVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK-E-----TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHR 336 (543)
T ss_dssp EEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET-T-----TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSC
T ss_pred eecccCcccCccccccCCceEEEEECCCCCEEEEEEC-C-----CCeEEEEEecCCCcceeEEeccCcCccCceECCCCC
Confidence 221 1 122322222222 445555432 1 3578888887643111101112222223332 2555
Q ss_pred -EEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEec-CCCeEEEEECCC
Q 012755 300 -FYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQ-ATNVVKKYNKTN 375 (457)
Q Consensus 300 -iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg-~~~~v~~Yd~~~ 375 (457)
+|+.+. ..+.+.++|+++++-...-.... .|.+..+.. ... ++.+|+.+. ..+.|.+||.++
T Consensus 337 ~l~va~~------~~~~v~v~D~~tg~l~~~i~~g~-------~ph~g~g~~-~~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 337 YFMTAAN------NSNKVAVIDSKDRRLSALVDVGK-------TPHPGRGAN-FVHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp EEEEEEG------GGTEEEEEETTTTEEEEEEECSS-------SBCCTTCEE-EEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred EEEEEec------CCCeEEEEECCCCeEEEeeccCC-------CCCCCCCcc-cCCCCCccEEEeccCCCceEEEEEeCC
Confidence 555432 13568889999986543211111 011112222 223 378888764 357899999876
Q ss_pred C-----cEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCC-CceEEEEEeeCCCC
Q 012755 376 N-----SWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQ-GEIIVLHSWDPTDG 429 (457)
Q Consensus 376 ~-----~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~-~~~~~v~~y~~~~~ 429 (457)
. .|+.+..++..... ...++.-.-+..||+-. ..++. .....|.+||.++.
T Consensus 403 ~~~~~~~~~~v~~l~~~g~~--~~~v~~~pdg~~l~v~~-~~~~~~~~~~~v~v~d~~~~ 459 (543)
T 1nir_A 403 KNHPQYAWKKVAELQGQGGG--SLFIKTHPKSSHLYVDT-TFNPDARISQSVAVFDLKNL 459 (543)
T ss_dssp TTCTTTBTSEEEEEECSCSC--CCCEECCTTCCEEEECC-TTCSSHHHHTCEEEEETTCT
T ss_pred CCCchhcCeEEEEEEcCCCC--ceEEEcCCCCCcEEEec-CCCCCcccCceEEEEECCCC
Confidence 2 38888766543211 11122212234566532 11110 01236888998874
No 167
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.45 E-value=3.9 Score=39.80 Aligned_cols=150 Identities=12% Similarity=0.109 Sum_probs=85.6
Q ss_pred eCCEEEEEceecCCcEEEEEECCCCcEEeCCCC-CCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCc-EEEC
Q 012755 204 VGTQLLVFGRELSGFAIWMYSLIANCWSKCPQM-NLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGT-WETL 281 (457)
Q Consensus 204 ~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~l-p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~-W~~~ 281 (457)
.++.||+... ....+.++|+.++.-..+... ..++ .+...-++.+|+..... ...++++|+.++. ...+
T Consensus 140 ~~g~lyv~d~--~~~~I~~id~~~g~~~~~~~~~~~~~--ia~~~~g~~l~~~d~~~-----~~~I~~~d~~~~~~~~~~ 210 (409)
T 3hrp_A 140 GNNTVLAYQR--DDPRVRLISVDDNKVTTVHPGFKGGK--PAVTKDKQRVYSIGWEG-----THTVYVYMKASGWAPTRI 210 (409)
T ss_dssp STTEEEEEET--TTTEEEEEETTTTEEEEEEETCCBCB--CEECTTSSEEEEEBSST-----TCEEEEEEGGGTTCEEEE
T ss_pred CCCCEEEEec--CCCcEEEEECCCCEEEEeeccCCCCc--eeEecCCCcEEEEecCC-----CceEEEEEcCCCceeEEe
Confidence 4678998764 345799999998876554322 1121 22222345677764321 1278899987654 2333
Q ss_pred CCCC--CCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCC-C-EEEEE-
Q 012755 282 PDMN--LPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSP-P-LVAVV- 354 (457)
Q Consensus 282 ~~~p--~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~-~-~~~~~- 354 (457)
.... ....-+.+++. ++.||+... ...+++||+.+.....+...... + ..... . .+++.
T Consensus 211 g~~~~~~~~~p~~iav~p~~g~lyv~d~-------~~~I~~~d~~~~~~~~~~~~~~~----g---~~~~~P~~~ia~~p 276 (409)
T 3hrp_A 211 GQLGSTFSGKIGAVALDETEEWLYFVDS-------NKNFGRFNVKTQEVTLIKQLELS----G---SLGTNPGPYLIYYF 276 (409)
T ss_dssp EECCTTSCSCCCBCEECTTSSEEEEECT-------TCEEEEEETTTCCEEEEEECCCC----S---CCCCSSCCEEEEET
T ss_pred eeccchhcCCcEEEEEeCCCCeEEEEEC-------CCcEEEEECCCCCEEEEeccccc----C---CCCCCccccEEEeC
Confidence 1111 11112233333 689999421 24789999998876555221110 0 01111 1 45555
Q ss_pred -CCEEEEEecCCCeEEEEECCCC
Q 012755 355 -NNQLYSADQATNVVKKYNKTNN 376 (457)
Q Consensus 355 -~g~ly~~gg~~~~v~~Yd~~~~ 376 (457)
++.||+.....+.|++||++..
T Consensus 277 ~~g~lyv~d~~~~~I~~~~~~g~ 299 (409)
T 3hrp_A 277 VDSNFYMSDQNLSSVYKITPDGE 299 (409)
T ss_dssp TTTEEEEEETTTTEEEEECTTCC
T ss_pred CCCEEEEEeCCCCEEEEEecCCC
Confidence 5899999888889999998766
No 168
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=94.45 E-value=1.2 Score=41.39 Aligned_cols=174 Identities=9% Similarity=0.005 Sum_probs=86.1
Q ss_pred CccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEe--C---CEEEEEceecCCcEEEEEECCCCc--EEeCCCCCCCcc
Q 012755 169 LMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAV--G---TQLLVFGRELSGFAIWMYSLIANC--WSKCPQMNLPRC 241 (457)
Q Consensus 169 ~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~--~---~~lyv~GG~~~~~~v~~yd~~t~~--W~~l~~lp~~r~ 241 (457)
...+..||..+.+.......... ..-..+.. + +.+++.|+.. ..+.+||..+++ -..+.....+
T Consensus 43 d~~v~iw~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~-- 113 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREIEKA-----KPIKCGTFGATSLQQRYLATGDFG--GNLHIWNLEAPEMPVYSVKGHKEI-- 113 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEEEES-----SCEEEEECTTCCTTTCCEEEEETT--SCEEEECTTSCSSCSEEECCCSSC--
T ss_pred CcEEEEEeCCCCcccceeeeccc-----CcEEEEEEcCCCCCCceEEEecCC--CeEEEEeCCCCCccEEEEEecccc--
Confidence 45677888877665433211110 00011222 2 3556666543 358888887664 1122111111
Q ss_pred ceeEE-------eeCCEEEEEeeecCCCCccceEEEEeCCCCc--EEECCCCCC--CCcceeEE-----EECCEEEEEec
Q 012755 242 LFGSS-------SLGEVAIVAGGTDKNGCILKSAELYNSELGT--WETLPDMNL--PRKLCSGF-----FMDGKFYIIGG 305 (457)
Q Consensus 242 ~~~~~-------~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~--~r~~~~~~-----~~~g~iyv~GG 305 (457)
-.++. .-++..++.|+.+ ..+.+||..++. ...+..... .+...+++ .-++.+++.|+
T Consensus 114 v~~~~~~~~~~~s~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 187 (357)
T 3i2n_A 114 INAIDGIGGLGIGEGAPEIVTGSRD------GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGY 187 (357)
T ss_dssp EEEEEEESGGGCC-CCCEEEEEETT------SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEE
T ss_pred eEEEeeccccccCCCccEEEEEeCC------CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEc
Confidence 11111 1245566666643 368889988764 333322221 11122222 13666666665
Q ss_pred cCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE----CCEEEEEecCCCeEEEEECCC
Q 012755 306 MSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV----NNQLYSADQATNVVKKYNKTN 375 (457)
Q Consensus 306 ~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~----~g~ly~~gg~~~~v~~Yd~~~ 375 (457)
.+ ..+..||..+.+-....... .....++.. ++..++.++..+.+..||..+
T Consensus 188 ~d------~~i~i~d~~~~~~~~~~~~~------------~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 243 (357)
T 3i2n_A 188 DN------GDIKLFDLRNMALRWETNIK------------NGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRT 243 (357)
T ss_dssp TT------SEEEEEETTTTEEEEEEECS------------SCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEE
T ss_pred cC------CeEEEEECccCceeeecCCC------------CceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcC
Confidence 32 46888999887643322111 111122222 567777787888999998865
No 169
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=94.44 E-value=3.8 Score=39.56 Aligned_cols=221 Identities=12% Similarity=0.046 Sum_probs=121.3
Q ss_pred ccEEEEEecCccEEEEeCCCCcEEeCCC-CCCCccccCCCeeeEE--eCCEEEEEceecCCcEEEEEECCCCcEEeCC--
Q 012755 160 EHWVYLACILMPWEAFDPLRQRWMRLPR-MQCDECFTSADKESLA--VGTQLLVFGRELSGFAIWMYSLIANCWSKCP-- 234 (457)
Q Consensus 160 ~~~l~~~~~~~~~~~ydp~~~~W~~l~~-~p~~~~~~~~~~~~~~--~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~-- 234 (457)
+++|++. ..+.+..+|+.......+.. +..+ ..++. .++.||+.. .....++++++.....+.+.
T Consensus 87 ~~~l~~~-~~~~I~~i~~~~~~~~~~~~~~~~~-------~gl~~d~~~~~ly~~D--~~~~~I~r~~~~g~~~~~~~~~ 156 (386)
T 3v65_B 87 EPVLLFA-NRIDIRQVLPHRSEYTLLLNNLENA-------IALDFHHRRELVFWSD--VTLDRILRANLNGSNVEEVVST 156 (386)
T ss_dssp CCEEEEE-CBSCEEEECTTSCCCEEEECSCSCE-------EEEEEETTTTEEEEEE--TTTTEEEEEETTSCCEEEEECS
T ss_pred cceeEee-cCccceeeccCCCcEEEEecCCCcc-------EEEEEecCCCeEEEEe--CCCCcEEEEecCCCCcEEEEeC
Confidence 4555544 35678888887766554432 1111 11222 357888864 23457999999887665542
Q ss_pred CCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECC--CCCCCCcceeEEEE--CCEEEEEeccCCCC
Q 012755 235 QMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLP--DMNLPRKLCSGFFM--DGKFYIIGGMSSPT 310 (457)
Q Consensus 235 ~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~--~~p~~r~~~~~~~~--~g~iyv~GG~~~~~ 310 (457)
.+..|. +.++-..++.||+.-.. ...++++++....-+.+. .+..| .++++- ++.||+..-.
T Consensus 157 ~~~~p~-glavd~~~g~lY~~d~~------~~~I~~~~~dg~~~~~l~~~~l~~P---~giavdp~~g~ly~td~~---- 222 (386)
T 3v65_B 157 GLESPG-GLAVDWVHDKLYWTDSG------TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWG---- 222 (386)
T ss_dssp SCSCCC-CEEEETTTTEEEEEETT------TTEEEECBTTSCSCEEEECSSCSCE---EEEEEETTTTEEEEEECS----
T ss_pred CCCCcc-EEEEEeCCCeEEEEcCC------CCeEEEEeCCCCceEEeecCCCCCC---cEEEEEcCCCeEEEeccC----
Confidence 222221 12222247899997431 357888887655433321 22222 233443 6899997421
Q ss_pred CCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEeccCCCcc
Q 012755 311 DPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRA 388 (457)
Q Consensus 311 ~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~ 388 (457)
....++++++....-..+.... .....++++- +++||+.....+.|+++|++...=+.+.... .
T Consensus 223 -~~~~I~r~~~dG~~~~~~~~~~-----------~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~--~ 288 (386)
T 3v65_B 223 -NTPRIEASSMDGSGRRIIADTH-----------LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG--L 288 (386)
T ss_dssp -SSCEEEEEETTSCSCEEEECSS-----------CSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSS--C
T ss_pred -CCCEEEEEeCCCCCcEEEEECC-----------CCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECC--C
Confidence 1357899998765433332110 1112234443 7899999988889999998764323332111 1
Q ss_pred CCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 389 NSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 389 ~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
..-.+++..++.||+..-.. ..|..+++.+
T Consensus 289 ----~~P~giav~~~~ly~td~~~------~~V~~~~~~~ 318 (386)
T 3v65_B 289 ----PHPFAITVFEDSLYWTDWHT------KSINSANKFT 318 (386)
T ss_dssp ----SSEEEEEEETTEEEEEETTT------TEEEEEETTT
T ss_pred ----CCceEEEEECCEEEEeeCCC------CeEEEEECCC
Confidence 01123445788999975322 1466666443
No 170
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.39 E-value=4.1 Score=39.70 Aligned_cols=203 Identities=9% Similarity=0.023 Sum_probs=105.4
Q ss_pred ccEEEEEec-CccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEe-CCEEEEEceecCCcEEEEEECCCCc-EEeCCCC
Q 012755 160 EHWVYLACI-LMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAV-GTQLLVFGRELSGFAIWMYSLIANC-WSKCPQM 236 (457)
Q Consensus 160 ~~~l~~~~~-~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~v~~yd~~t~~-W~~l~~l 236 (457)
++.||+... ...+..+|+.++.-..+....... + . .+.. ++.||+.... ....++++++.++. ...+...
T Consensus 141 ~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~--~-i---a~~~~g~~l~~~d~~-~~~~I~~~d~~~~~~~~~~g~~ 213 (409)
T 3hrp_A 141 NNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGG--K-P---AVTKDKQRVYSIGWE-GTHTVYVYMKASGWAPTRIGQL 213 (409)
T ss_dssp TTEEEEEETTTTEEEEEETTTTEEEEEEETCCBC--B-C---EECTTSSEEEEEBSS-TTCEEEEEEGGGTTCEEEEEEC
T ss_pred CCCEEEEecCCCcEEEEECCCCEEEEeeccCCCC--c-e---eEecCCCcEEEEecC-CCceEEEEEcCCCceeEEeeec
Confidence 456777754 467889999877554443221110 0 1 1222 4456665432 22279999987653 2233111
Q ss_pred C--CCccceeEEee--CCEEEEEeeecCCCCccceEEEEeCCCCcEEECC---CCCCCCcc-e-eEEEE--CCEEEEEec
Q 012755 237 N--LPRCLFGSSSL--GEVAIVAGGTDKNGCILKSAELYNSELGTWETLP---DMNLPRKL-C-SGFFM--DGKFYIIGG 305 (457)
Q Consensus 237 p--~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~---~~p~~r~~-~-~~~~~--~g~iyv~GG 305 (457)
+ ....-+++++- ++.||+... ...+++||+.++.-..+. ........ . .+++. ++.||+...
T Consensus 214 ~~~~~~~p~~iav~p~~g~lyv~d~-------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 214 GSTFSGKIGAVALDETEEWLYFVDS-------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp CTTSCSCCCBCEECTTSSEEEEECT-------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred cchhcCCcEEEEEeCCCCeEEEEEC-------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC
Confidence 0 11111233332 688999421 247999999888755441 11111222 1 44544 589999742
Q ss_pred cCCCCCCCceEEEEECCCCceEEcCCCC-CCCCCCCC--CCCCCCCCEEEEE-CCEEEEEec-CCCeEEEEECCCCcEEE
Q 012755 306 MSSPTDPLTCGEEYNLETRTWKRIENMY-PSNVGTQS--NPAMSSPPLVAVV-NNQLYSADQ-ATNVVKKYNKTNNSWTV 380 (457)
Q Consensus 306 ~~~~~~~~~~~~~yd~~t~~W~~~~~~~-~~~~~~~~--~~~~r~~~~~~~~-~g~ly~~gg-~~~~v~~Yd~~~~~W~~ 380 (457)
..+.+.+||+... ...+.... ....+.+. ........++++- +|.||+... ..+.|.++|+.++.-..
T Consensus 287 ------~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~ 359 (409)
T 3hrp_A 287 ------NLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVST 359 (409)
T ss_dssp ------TTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEE
T ss_pred ------CCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEE
Confidence 2457889988764 33222111 00000000 0001112233332 678999987 78899999977777666
Q ss_pred ecc
Q 012755 381 VKR 383 (457)
Q Consensus 381 v~~ 383 (457)
+..
T Consensus 360 ~~g 362 (409)
T 3hrp_A 360 VAG 362 (409)
T ss_dssp EEE
T ss_pred EeC
Confidence 543
No 171
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=94.34 E-value=4.2 Score=39.70 Aligned_cols=204 Identities=7% Similarity=-0.054 Sum_probs=95.9
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEe--CCCCCC-CccceeEE-eeC---CEEEEEeeecCCCCccceEEEEeCCCCc
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSK--CPQMNL-PRCLFGSS-SLG---EVAIVAGGTDKNGCILKSAELYNSELGT 277 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~--l~~lp~-~r~~~~~~-~~~---~~iyv~GG~~~~~~~~~~v~~yd~~t~~ 277 (457)
++..++.|+. ...++.++..+..... ...+.. ...-.+++ .-+ +++++.|+.+ ..+.+||..++.
T Consensus 160 ~~~~l~~~~~--~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d------~~i~vwd~~~~~ 231 (450)
T 2vdu_B 160 DDTTVIIADK--FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD------EHIKISHYPQCF 231 (450)
T ss_dssp TSSEEEEEET--TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT------SCEEEEEESCTT
T ss_pred CCCEEEEEeC--CCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC------CcEEEEECCCCc
Confidence 4555555543 3468888877654332 111111 11111222 225 6677777643 467888887765
Q ss_pred EEE--CCCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCC-----------CC--CCCCCC
Q 012755 278 WET--LPDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYP-----------SN--VGTQSN 342 (457)
Q Consensus 278 W~~--~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~-----------~~--~~~~~~ 342 (457)
... +.... ......... ++++++.|+.+ ..+.+||..+++....-.... ++ +.....
T Consensus 232 ~~~~~~~~h~-~~v~~~~~s-d~~~l~s~~~d------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (450)
T 2vdu_B 232 IVDKWLFGHK-HFVSSICCG-KDYLLLSAGGD------DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENN 303 (450)
T ss_dssp CEEEECCCCS-SCEEEEEEC-STTEEEEEESS------SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC---------
T ss_pred eeeeeecCCC-CceEEEEEC-CCCEEEEEeCC------CeEEEEECCCCcEeeeecchhhhhhhhhhccccccccccccc
Confidence 322 21111 111111223 67777777633 468889998876432211000 00 000000
Q ss_pred -CCCCCCCEEEEE-CCEEEEEec-CCCeEEEEEC--CC-CcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCC-
Q 012755 343 -PAMSSPPLVAVV-NNQLYSADQ-ATNVVKKYNK--TN-NSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQ- 415 (457)
Q Consensus 343 -~~~r~~~~~~~~-~g~ly~~gg-~~~~v~~Yd~--~~-~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~- 415 (457)
........++.. +++.+++++ ..+.|..||. .+ ..++.+..++... .-..++...+.+++..+.....
T Consensus 304 ~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~-----~v~~~~~~~~~~~v~~~~~~~~~ 378 (450)
T 2vdu_B 304 DIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPY-----NVISLSAHNDEFQVTLDNKESSG 378 (450)
T ss_dssp -CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSS-----CEEEEEEETTEEEEEECCTTCCS
T ss_pred ccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCC-----ceEEEEecCCcEEEEEecccCCC
Confidence 000111112222 344444444 6788999998 33 4566665544331 1123444456777776543211
Q ss_pred --CceEEEEEeeCCCC
Q 012755 416 --GEIIVLHSWDPTDG 429 (457)
Q Consensus 416 --~~~~~v~~y~~~~~ 429 (457)
.....++.++.+.+
T Consensus 379 ~~~~~i~v~~~~~~~~ 394 (450)
T 2vdu_B 379 VQKNFAKFIEYNLNEN 394 (450)
T ss_dssp SCCCSEEEEEEETTTT
T ss_pred CCCcceEEEEEEcCCC
Confidence 23346777777764
No 172
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=94.27 E-value=3.6 Score=46.07 Aligned_cols=235 Identities=6% Similarity=-0.044 Sum_probs=107.6
Q ss_pred cEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeE--EeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCC
Q 012755 161 HWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESL--AVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNL 238 (457)
Q Consensus 161 ~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~--~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~ 238 (457)
..+...+....+..||..+.+-... +.. +...-..+ ..++..++.|+. ...+.+||..+++....-.-.
T Consensus 628 ~~l~s~~~d~~i~vw~~~~~~~~~~--~~~----h~~~v~~~~~s~~~~~l~s~~~--d~~v~vwd~~~~~~~~~~~~~- 698 (1249)
T 3sfz_A 628 QRIASCGADKTLQVFKAETGEKLLD--IKA----HEDEVLCCAFSSDDSYIATCSA--DKKVKIWDSATGKLVHTYDEH- 698 (1249)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEE--ECC----CSSCEEEEEECTTSSEEEEEET--TSEEEEEETTTCCEEEEEECC-
T ss_pred CEEEEEeCCCeEEEEECCCCCEEEE--ecc----CCCCEEEEEEecCCCEEEEEeC--CCeEEEEECCCCceEEEEcCC-
Confidence 3444444456788888877653211 110 11100112 235666666654 346999999887643321111
Q ss_pred CccceeEEee---CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEE--ECCEEEEEeccCCCCCCC
Q 012755 239 PRCLFGSSSL---GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFF--MDGKFYIIGGMSSPTDPL 313 (457)
Q Consensus 239 ~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~--~~g~iyv~GG~~~~~~~~ 313 (457)
...-.+++.. ++.+++.|+.+ ..+.++|..++.....-. ........+. -++...+.|+.+
T Consensus 699 ~~~v~~~~~~~~~~~~~l~sg~~d------~~v~vwd~~~~~~~~~~~--~h~~~v~~~~~sp~~~~l~s~s~d------ 764 (1249)
T 3sfz_A 699 SEQVNCCHFTNKSNHLLLATGSND------FFLKLWDLNQKECRNTMF--GHTNSVNHCRFSPDDELLASCSAD------ 764 (1249)
T ss_dssp SSCEEEEEECSSSSCCEEEEEETT------SCEEEEETTSSSEEEEEC--CCSSCEEEEEECSSTTEEEEEESS------
T ss_pred CCcEEEEEEecCCCceEEEEEeCC------CeEEEEECCCcchhheec--CCCCCEEEEEEecCCCEEEEEECC------
Confidence 1111122222 33344455432 458889998876433211 1111111222 255666666533
Q ss_pred ceEEEEECCCCceEEcCCCCCCCCCCCCCC--CC-CCCCEEEEECCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCC
Q 012755 314 TCGEEYNLETRTWKRIENMYPSNVGTQSNP--AM-SSPPLVAVVNNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANS 390 (457)
Q Consensus 314 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~--~~-r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~ 390 (457)
..+..||..+..-...-............+ .. ........-+|..+++++ .+.+..||..+..............
T Consensus 765 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~~~~~~- 842 (1249)
T 3sfz_A 765 GTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHTGHHST- 842 (1249)
T ss_dssp SEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEECSSSSC-
T ss_pred CeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCCCceeEEcCCCCCc-
Confidence 357788887664322111100000000000 00 000011122555555554 5789999998876544322111111
Q ss_pred CCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 391 FNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 391 ~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
.......-+++++++|+.++ .+.+||..+.
T Consensus 843 ---v~~~~~sp~~~~l~~~~~dg------~v~vwd~~~~ 872 (1249)
T 3sfz_A 843 ---IQYCDFSPYDHLAVIALSQY------CVELWNIDSR 872 (1249)
T ss_dssp ---CCEEEECSSTTEEEEECSSS------CEEEEETTTT
T ss_pred ---eEEEEEcCCCCEEEEEeCCC------eEEEEEcCCC
Confidence 11112234667777777653 3777888763
No 173
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=94.18 E-value=1.9 Score=40.88 Aligned_cols=199 Identities=10% Similarity=-0.026 Sum_probs=93.7
Q ss_pred cEEEEEECCCCcEEeCCCCCCCccceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEE-E
Q 012755 218 FAIWMYSLIANCWSKCPQMNLPRCLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGF-F 295 (457)
Q Consensus 218 ~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~-~ 295 (457)
..++++|..+++-+.+..-+. ...+....- +++.+++............++.+|..+...+.+............+ .
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~~-~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~s 246 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQENQ-WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWV 246 (388)
T ss_dssp EEEEEEETTTCCEEEEEEESS-CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEEC
T ss_pred ceEEEEECCCCceEEeecCCc-cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceEC
Confidence 579999999887666532221 111222222 4444333332221122468999999888777665432211111112 2
Q ss_pred ECCE-EEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCE-EEEEe--------cCC
Q 012755 296 MDGK-FYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQ-LYSAD--------QAT 365 (457)
Q Consensus 296 ~~g~-iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~-ly~~g--------g~~ 365 (457)
-+|+ |+......+. ....++.+|+.+++-+.+...+... ......... ...-+|+ |++.. ...
T Consensus 247 pdg~~l~~~~~~~~~--~~~~l~~~d~~~g~~~~l~~~~~~~----~~~~~~~~~-~~spdg~~l~~~~~~~~~~~~~~~ 319 (388)
T 3pe7_A 247 PDGSALVYVSYLKGS--PDRFIYSADPETLENRQLTSMPACS----HLMSNYDGS-LMVGDGSDAPVDVQDDSGYKIEND 319 (388)
T ss_dssp TTSSCEEEEEEETTC--CCEEEEEECTTTCCEEEEEEECCEE----EEEECTTSS-EEEEEECCC------------CCC
T ss_pred CCCCEEEEEecCCCC--CcceEEEEecCCCceEEEEcCCCce----eeeecCCCC-eEccCCCcceeEeeeccccccCCC
Confidence 2565 5343322211 1235899999998876664432100 000000111 2233443 33221 234
Q ss_pred CeEEEEECCCCcEEEeccCCCccC------CCCcceEEEEEeCC-EEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 366 NVVKKYNKTNNSWTVVKRLPVRAN------SFNGWGLAFKACGN-SLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 366 ~~v~~Yd~~~~~W~~v~~~p~~~~------~~~~~~~~~~~~~g-~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
..++.+|+++++-+.+...+.... .......+. .-+| .|++.....+. ..+|.++....
T Consensus 320 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-spDg~~l~~~s~~~g~----~~l~~~~l~~~ 385 (388)
T 3pe7_A 320 PFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSF-TPDDKQILFTSDVHGK----PALYLATLPES 385 (388)
T ss_dssp CEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEE-CTTSSEEEEEECTTSS----CEEEEEECCGG
T ss_pred CEEEEEeccCCceEEeccccCcccccccccccCCCCccC-CCCCCEEEEEecCCCc----eeEEEEECChh
Confidence 589999999988777654332000 000011222 3355 56655544332 25888887764
No 174
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=94.15 E-value=1.4 Score=42.41 Aligned_cols=149 Identities=11% Similarity=0.116 Sum_probs=75.9
Q ss_pred CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE-CCEEEEEeccCCCCCCCceEEEEECCCCceE
Q 012755 249 GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM-DGKFYIIGGMSSPTDPLTCGEEYNLETRTWK 327 (457)
Q Consensus 249 ~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 327 (457)
+++.++.|+.+ ..+.++|..+++-...-.-. ...-.+++.. ++...+.|+.+ ..+..||..+++..
T Consensus 134 dg~~l~s~~~d------~~i~iwd~~~~~~~~~~~~h-~~~v~~~~~~p~~~~l~s~s~d------~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 134 DGKFLATGAED------RLIRIWDIENRKIVMILQGH-EQDIYSLDYFPSGDKLVSGSGD------RTVRIWDLRTGQCS 200 (393)
T ss_dssp TSSEEEEEETT------SCEEEEETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEE
T ss_pred CCCEEEEEcCC------CeEEEEECCCCcEEEEEccC-CCCEEEEEEcCCCCEEEEecCC------CcEEEEECCCCeeE
Confidence 56677777643 46888999887643321101 1111122222 45555555532 46788999887654
Q ss_pred EcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEeccCC-CccCCCCcceEEEE-EeCC
Q 012755 328 RIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSWTVVKRLP-VRANSFNGWGLAFK-ACGN 403 (457)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p-~~~~~~~~~~~~~~-~~~g 403 (457)
..-.... ....++.. ++++++.|+..+.|..||..+..-...-..+ .....+...-..+. .-++
T Consensus 201 ~~~~~~~------------~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g 268 (393)
T 1erj_A 201 LTLSIED------------GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDG 268 (393)
T ss_dssp EEEECSS------------CEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTS
T ss_pred EEEEcCC------------CcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCC
Confidence 3222111 11122222 6788888888889999999887543221111 00011111111222 2256
Q ss_pred EEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 404 SLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 404 ~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
++++.|+.++ .+.+||...
T Consensus 269 ~~l~s~s~d~------~v~~wd~~~ 287 (393)
T 1erj_A 269 QSVVSGSLDR------SVKLWNLQN 287 (393)
T ss_dssp SEEEEEETTS------EEEEEEC--
T ss_pred CEEEEEeCCC------EEEEEECCC
Confidence 7777777663 577787754
No 175
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=94.10 E-value=2.4 Score=42.90 Aligned_cols=142 Identities=11% Similarity=0.068 Sum_probs=77.9
Q ss_pred CEEEEEeee-cCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCce
Q 012755 250 EVAIVAGGT-DKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTW 326 (457)
Q Consensus 250 ~~iyv~GG~-~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W 326 (457)
+..++.|+. + ..+.+||..++.... ..+.........+.+ ++++.+.|+.+ ..+.+||..+.+-
T Consensus 456 ~~~l~~~~~~d------~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~d------g~i~iw~~~~~~~ 522 (615)
T 1pgu_A 456 QNYVAVGLEEG------NTIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVM------GKILLYDLQSREV 522 (615)
T ss_dssp SSEEEEEETTT------SCEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTTEE
T ss_pred CCEEEEeecCC------CeEEEEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCC------CeEEEeeCCCCcc
Confidence 556666654 2 468899998877643 222222222223333 67777777643 3578899987654
Q ss_pred EEcCCCCCCCCCCCCCCCCCCCCEEEEE------------CCEEEEEecCCCeEEEEECCCCc--EEEeccCCCccCCCC
Q 012755 327 KRIENMYPSNVGTQSNPAMSSPPLVAVV------------NNQLYSADQATNVVKKYNKTNNS--WTVVKRLPVRANSFN 392 (457)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~------------~g~ly~~gg~~~~v~~Yd~~~~~--W~~v~~~p~~~~~~~ 392 (457)
... +.. . .......+.+ ++++++.++..+.|..||.++.. ...+. ....
T Consensus 523 ~~~--~~~--------~-h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~---~h~~--- 585 (615)
T 1pgu_A 523 KTS--RWA--------F-RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALN---AHKD--- 585 (615)
T ss_dssp EEC--CSC--------C-CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETT---SSTT---
T ss_pred eeE--eec--------C-CCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhh---cCcc---
Confidence 322 111 0 1112223333 67888888888899999998852 22221 1111
Q ss_pred cceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 393 GWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 393 ~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
........-+++ ++.+|.++ .+.+|+.+.
T Consensus 586 ~v~~l~~s~~~~-l~s~~~d~------~v~iw~~~~ 614 (615)
T 1pgu_A 586 GVNNLLWETPST-LVSSGADA------CIKRWNVVL 614 (615)
T ss_dssp CEEEEEEEETTE-EEEEETTS------CEEEEEEC-
T ss_pred ceEEEEEcCCCC-eEEecCCc------eEEEEeeec
Confidence 111112345778 77777664 477787654
No 176
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.09 E-value=3.9 Score=38.37 Aligned_cols=213 Identities=11% Similarity=0.083 Sum_probs=106.1
Q ss_pred cEEEEEecCccEEEEeCCCCcEEeCCCCC-CCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCC-C
Q 012755 161 HWVYLACILMPWEAFDPLRQRWMRLPRMQ-CDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMN-L 238 (457)
Q Consensus 161 ~~l~~~~~~~~~~~ydp~~~~W~~l~~~p-~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp-~ 238 (457)
..+|+++....++.-+-.-.+|..+.... .+..... .+...++.+|+.|.. ..+++-+-.-++|+.+.... .
T Consensus 47 ~~~~~~G~~g~i~~s~DgG~tW~~~~~~~~~~~~~~~---~i~~~~~~~~~~g~~---g~i~~S~DgG~tW~~~~~~~~~ 120 (327)
T 2xbg_A 47 HHGWLVGVNATLMETRDGGQTWEPRTLVLDHSDYRFN---SVSFQGNEGWIVGEP---PIMLHTTDGGQSWSQIPLDPKL 120 (327)
T ss_dssp SCEEEEETTTEEEEESSTTSSCEECCCCCSCCCCEEE---EEEEETTEEEEEEET---TEEEEESSTTSSCEECCCCTTC
T ss_pred CcEEEEcCCCeEEEeCCCCCCCeECCCCCCCCCccEE---EEEecCCeEEEEECC---CeEEEECCCCCCceECccccCC
Confidence 34555554334444444456898875321 1111111 133446788887532 24555444457899976431 2
Q ss_pred CccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE-CCEEEEEeccCCCCCCCceE
Q 012755 239 PRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM-DGKFYIIGGMSSPTDPLTCG 316 (457)
Q Consensus 239 ~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g~iyv~GG~~~~~~~~~~~ 316 (457)
+-....++. -++.+|+.|.. ..+++-+-.-.+|+.+..... ...+.++.. ++.+|++|.. ..+
T Consensus 121 ~~~~~~i~~~~~~~~~~~~~~-------g~v~~S~DgG~tW~~~~~~~~-~~~~~~~~~~~~~~~~~g~~-------G~~ 185 (327)
T 2xbg_A 121 PGSPRLIKALGNGSAEMITNV-------GAIYRTKDSGKNWQALVQEAI-GVMRNLNRSPSGEYVAVSSR-------GSF 185 (327)
T ss_dssp SSCEEEEEEEETTEEEEEETT-------CCEEEESSTTSSEEEEECSCC-CCEEEEEECTTSCEEEEETT-------SSE
T ss_pred CCCeEEEEEECCCCEEEEeCC-------ccEEEEcCCCCCCEEeecCCC-cceEEEEEcCCCcEEEEECC-------CcE
Confidence 222233433 36778877631 124333334567998854322 222333333 5667766521 123
Q ss_pred EEE-ECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEE-ECCEEEEEecCCCeEEEEECC-CCcEEEecc--CCCccCCC
Q 012755 317 EEY-NLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAV-VNNQLYSADQATNVVKKYNKT-NNSWTVVKR--LPVRANSF 391 (457)
Q Consensus 317 ~~y-d~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~g~ly~~gg~~~~v~~Yd~~-~~~W~~v~~--~p~~~~~~ 391 (457)
+.- |....+|+.+.... ......++. -++.+|+++. .+.++..+.+ ..+|+.+.. ++...
T Consensus 186 ~~S~d~gG~tW~~~~~~~-----------~~~~~~~~~~~~g~~~~~~~-~G~~~~s~~D~G~tW~~~~~~~~~~~~--- 250 (327)
T 2xbg_A 186 YSTWEPGQTAWEPHNRTT-----------SRRLHNMGFTPDGRLWMIVN-GGKIAFSDPDNSENWGELLSPLRRNSV--- 250 (327)
T ss_dssp EEEECTTCSSCEEEECCS-----------SSCEEEEEECTTSCEEEEET-TTEEEEEETTEEEEECCCBCTTSSCCS---
T ss_pred EEEeCCCCCceeECCCCC-----------CCccceeEECCCCCEEEEeC-CceEEEecCCCCCeeEeccCCcccCCc---
Confidence 333 33357899885422 222223332 2678887763 3556666433 668998753 22211
Q ss_pred CcceEEEEEe-CCEEEEEcCc
Q 012755 392 NGWGLAFKAC-GNSLLVIGGH 411 (457)
Q Consensus 392 ~~~~~~~~~~-~g~lyv~GG~ 411 (457)
.. ..++.. ++.+|++|+.
T Consensus 251 -~~-~~v~~~~~~~~~~~g~~ 269 (327)
T 2xbg_A 251 -GF-LDLAYRTPNEVWLAGGA 269 (327)
T ss_dssp -CE-EEEEESSSSCEEEEEST
T ss_pred -ce-EEEEecCCCEEEEEeCC
Confidence 11 222222 6789998863
No 177
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=94.09 E-value=7.4 Score=41.56 Aligned_cols=203 Identities=9% Similarity=-0.001 Sum_probs=109.0
Q ss_pred cCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEE--eCCEEEEEceecCCcEEEEEECCCC----cEEe-CC-CCCCC
Q 012755 168 ILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLA--VGTQLLVFGRELSGFAIWMYSLIAN----CWSK-CP-QMNLP 239 (457)
Q Consensus 168 ~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~--~~~~lyv~GG~~~~~~v~~yd~~t~----~W~~-l~-~lp~~ 239 (457)
....+..++.....+..+..-.. .. ..+.. .++.||+... ....++++++... .... +. .+..|
T Consensus 402 n~~~Ir~i~l~~~~~~~l~~~~~---~~---~gl~~d~~~~~lY~sD~--~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P 473 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSLIPNLR---NV---VALDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISRDIQAP 473 (791)
T ss_dssp CBSSEEEECTTSCCCEEEECSCS---SE---EEEEEETTTTEEEEEET--TTTEEEEEEC--------CEEEECSSCSCC
T ss_pred cccceeEeeccCCcceeeecCCC---ce---EEEeecccCCeeEEeec--cceeEEEEeccCCCCCcceeEEEecCCCCc
Confidence 34566777776666554432110 00 01122 2578888653 2356777777642 2222 22 22222
Q ss_pred ccceeEEe--eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECC--CCCCCCcceeEEEE--CCEEEEEeccCCCCCCC
Q 012755 240 RCLFGSSS--LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLP--DMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPL 313 (457)
Q Consensus 240 r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~--~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~ 313 (457)
.++++ .+++||+.-. ....++++|+....-+.+. .+..| .++++- +|.||+.--. ..
T Consensus 474 ---~GLAvD~~~~~LY~tD~------~~~~I~v~~ldG~~~~~l~~~~l~~P---~gIaVDp~~g~LYwtD~g-----~~ 536 (791)
T 3m0c_C 474 ---DGLAVDWIHSNIYWTDS------VLGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG-----TP 536 (791)
T ss_dssp ---CEEEEETTTTEEEEEET------TTTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECS-----SS
T ss_pred ---ceeeeeecCCcEEEEec------CCCeEEEEeCCCCeEEEEEeCCCCCc---ceEEEecCCCCEEEecCC-----CC
Confidence 23333 4789999842 2468999999876655542 22222 233442 5899997411 12
Q ss_pred ceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCC
Q 012755 314 TCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSF 391 (457)
Q Consensus 314 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~ 391 (457)
..|+++++....=..+..-. .....++++- +++||+.....+.|+++|++...=+.+.......
T Consensus 537 ~~I~~~~~dG~~~~~lv~~~-----------l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l--- 602 (791)
T 3m0c_C 537 AKIKKGGLNGVDIYSLVTEN-----------IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRL--- 602 (791)
T ss_dssp CEEEEEETTSCCEEEEECSS-----------CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTT---
T ss_pred CeEEEEecCCCceEEEEeCC-----------CCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCcc---
Confidence 56888988765444332211 1112234433 6899999888889999999765433332111111
Q ss_pred CcceEEEEEeCCEEEEEcC
Q 012755 392 NGWGLAFKACGNSLLVIGG 410 (457)
Q Consensus 392 ~~~~~~~~~~~g~lyv~GG 410 (457)
....+++..+++||+.-.
T Consensus 603 -~~P~glav~~~~lYwtD~ 620 (791)
T 3m0c_C 603 -AHPFSLAVFEDKVFWTDI 620 (791)
T ss_dssp -SSEEEEEEETTEEEEEET
T ss_pred -CCCCEEEEeCCEEEEEEC
Confidence 122456667889999753
No 178
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=94.08 E-value=2.2 Score=39.69 Aligned_cols=195 Identities=10% Similarity=0.019 Sum_probs=90.4
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeC-CCCCCCccceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCcEEECC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKC-PQMNLPRCLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGTWETLP 282 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l-~~lp~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~ 282 (457)
++.+++.|+.. ..+.+||..+++-... ..-. ..-.+++.. ++..++.|+.+ ..+.+||..+++-...-
T Consensus 43 ~~~~l~~~~~d--g~i~vwd~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~ 112 (369)
T 3zwl_B 43 EGDLLFSCSKD--SSASVWYSLNGERLGTLDGHT--GTIWSIDVDCFTKYCVTGSAD------YSIKLWDVSNGQCVATW 112 (369)
T ss_dssp TSCEEEEEESS--SCEEEEETTTCCEEEEECCCS--SCEEEEEECTTSSEEEEEETT------TEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEeCC--CEEEEEeCCCchhhhhhhhcC--CcEEEEEEcCCCCEEEEEeCC------CeEEEEECCCCcEEEEe
Confidence 45555556543 3588889877654332 2111 111222222 45666666643 46889999887644332
Q ss_pred CCCCCCcceeEEE-ECCEEEEEeccCCCCCCCceEEEEECCCCc----eEEcCCCCCCCCCCCCCCCCCCCCEEEEE--C
Q 012755 283 DMNLPRKLCSGFF-MDGKFYIIGGMSSPTDPLTCGEEYNLETRT----WKRIENMYPSNVGTQSNPAMSSPPLVAVV--N 355 (457)
Q Consensus 283 ~~p~~r~~~~~~~-~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~----W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~ 355 (457)
..+. ....+.. -+++.++.++.+.. .....+..||..+.. +......+.... ...........+.. +
T Consensus 113 ~~~~--~v~~~~~~~~~~~l~~~~~~~~-~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 186 (369)
T 3zwl_B 113 KSPV--PVKRVEFSPCGNYFLAILDNVM-KNPGSINIYEIERDSATHELTKVSEEPIHKI---ITHEGLDAATVAGWSTK 186 (369)
T ss_dssp ECSS--CEEEEEECTTSSEEEEEECCBT-TBCCEEEEEEEEECTTTCCEEEECSSCSEEE---ECCTTCCCEEEEEECGG
T ss_pred ecCC--CeEEEEEccCCCEEEEecCCcc-CCCCEEEEEEecCCccceeecccccceeeec---cCCcCccceeEEEEcCC
Confidence 2111 1112222 24555555443211 123467777765542 221111100000 00000001222222 5
Q ss_pred CEEEEEecCCCeEEEEECCC-CcE-EEeccCCCccCCCCcceEEEE-EeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 356 NQLYSADQATNVVKKYNKTN-NSW-TVVKRLPVRANSFNGWGLAFK-ACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 356 g~ly~~gg~~~~v~~Yd~~~-~~W-~~v~~~p~~~~~~~~~~~~~~-~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
++.+++++..+.+..||..+ ..- ..+...... -..+. .-++.+++.|+.++ .+.+||..+
T Consensus 187 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-------v~~~~~~~~~~~l~~~~~d~------~i~v~d~~~ 249 (369)
T 3zwl_B 187 GKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKS-------ISDMQFSPDLTYFITSSRDT------NSFLVDVST 249 (369)
T ss_dssp GCEEEEEETTSEEEEEETTTTTEEEEEEECCSSC-------EEEEEECTTSSEEEEEETTS------EEEEEETTT
T ss_pred CCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCc-------eeEEEECCCCCEEEEecCCc------eEEEEECCC
Confidence 66777787888999999987 332 222211111 11121 22566666665543 477777765
No 179
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=94.07 E-value=1.8 Score=39.87 Aligned_cols=149 Identities=13% Similarity=0.066 Sum_probs=72.8
Q ss_pred EEEEecCccEEEEeCCCCcEEeCCCCCCCc-cccCCCeeeEEeCC-EEEEEceecCCcEEEEEECCCCcEEeCCCCCCC-
Q 012755 163 VYLACILMPWEAFDPLRQRWMRLPRMQCDE-CFTSADKESLAVGT-QLLVFGRELSGFAIWMYSLIANCWSKCPQMNLP- 239 (457)
Q Consensus 163 l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~-~~~~~~~~~~~~~~-~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~- 239 (457)
++.......+..+|+.+.+-...-..+... .... ..+..++ .+|+.+. ....++++|..+++-...-+.+.+
T Consensus 4 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~---~~~s~dg~~l~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~~ 78 (337)
T 1pby_B 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMV---PMVAPGGRIAYATVN--KSESLVKIDLVTGETLGRIDLSTPE 78 (337)
T ss_dssp EEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCC---EEECTTSSEEEEEET--TTTEEEEEETTTCCEEEEEECCBTT
T ss_pred EEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccc---eEEcCCCCEEEEEeC--CCCeEEEEECCCCCeEeeEEcCCcc
Confidence 444445677888998876543221122100 0111 1223344 6777653 235799999988775432111110
Q ss_pred ---ccceeEEee--CCEEEEEeeec---CCCC--ccceEEEEeCCCCcEEECCCCCCCCcceeEEE-ECCE-EEEEeccC
Q 012755 240 ---RCLFGSSSL--GEVAIVAGGTD---KNGC--ILKSAELYNSELGTWETLPDMNLPRKLCSGFF-MDGK-FYIIGGMS 307 (457)
Q Consensus 240 ---r~~~~~~~~--~~~iyv~GG~~---~~~~--~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~g~-iyv~GG~~ 307 (457)
.....++.- +..+|+..... .... ....+.+||..+++....-+.. .....++. -+|+ +|+.+
T Consensus 79 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~--- 153 (337)
T 1pby_B 79 ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP--RQITMLAWARDGSKLYGLG--- 153 (337)
T ss_dssp EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC--SSCCCEEECTTSSCEEEES---
T ss_pred cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC--CCcceeEECCCCCEEEEeC---
Confidence 011122222 44777764211 0100 1368999999887754321111 11122222 2454 66651
Q ss_pred CCCCCCceEEEEECCCCceE
Q 012755 308 SPTDPLTCGEEYNLETRTWK 327 (457)
Q Consensus 308 ~~~~~~~~~~~yd~~t~~W~ 327 (457)
..+.+||+.+++-.
T Consensus 154 ------~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 154 ------RDLHVMDPEAGTLV 167 (337)
T ss_dssp ------SSEEEEETTTTEEE
T ss_pred ------CeEEEEECCCCcEe
Confidence 35788999887643
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.06 E-value=2.5 Score=38.57 Aligned_cols=185 Identities=11% Similarity=0.003 Sum_probs=94.3
Q ss_pred ccEEEEEec-CccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEE----cee-----------cCCcEEEEE
Q 012755 160 EHWVYLACI-LMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVF----GRE-----------LSGFAIWMY 223 (457)
Q Consensus 160 ~~~l~~~~~-~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~----GG~-----------~~~~~v~~y 223 (457)
++.+|+... ...+..||+.+.+...+................+..+|.+|+. |.. .....++.+
T Consensus 79 dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~ 158 (296)
T 3e5z_A 79 QGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRL 158 (296)
T ss_dssp TCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEE
T ss_pred CCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEE
Confidence 445666553 4678999998887765532211111111111123346788886 321 113479999
Q ss_pred ECCCCcEEeCC-CCCCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCC-CCcE---EECCCCCCCCcceeEEEEC
Q 012755 224 SLIANCWSKCP-QMNLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSE-LGTW---ETLPDMNLPRKLCSGFFMD 297 (457)
Q Consensus 224 d~~t~~W~~l~-~lp~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~-t~~W---~~~~~~p~~r~~~~~~~~~ 297 (457)
|+. ++.+.+. .+..+ .+++. -++++++... . ...+++||.. +++. ..+-.........-+..-+
T Consensus 159 ~~~-g~~~~~~~~~~~~---~gi~~s~dg~~lv~~~-~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~ 228 (296)
T 3e5z_A 159 APD-GTLSAPIRDRVKP---NGLAFLPSGNLLVSDT-G-----DNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAG 228 (296)
T ss_dssp CTT-SCEEEEECCCSSE---EEEEECTTSCEEEEET-T-----TTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTT
T ss_pred CCC-CCEEEeecCCCCC---ccEEECCCCCEEEEeC-C-----CCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCC
Confidence 987 5554432 22211 22332 2555554432 1 2578888876 4554 1111111111111122237
Q ss_pred CEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--C-CEEEEEecCCCeEEEEECC
Q 012755 298 GKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--N-NQLYSADQATNVVKKYNKT 374 (457)
Q Consensus 298 g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~-g~ly~~gg~~~~v~~Yd~~ 374 (457)
|.||+.. ...+.+||+.......+.. +. . ...++.- + +.||+.. .+.++.|+++
T Consensus 229 G~l~v~~--------~~~v~~~~~~g~~~~~~~~-~~----------~--~~~~~f~~~d~~~L~v~t--~~~l~~~~~~ 285 (296)
T 3e5z_A 229 GLIWASA--------GDGVHVLTPDGDELGRVLT-PQ----------T--TSNLCFGGPEGRTLYMTV--STEFWSIETN 285 (296)
T ss_dssp SCEEEEE--------TTEEEEECTTSCEEEEEEC-SS----------C--CCEEEEESTTSCEEEEEE--TTEEEEEECS
T ss_pred CCEEEEc--------CCeEEEECCCCCEEEEEEC-CC----------C--ceeEEEECCCCCEEEEEc--CCeEEEEEcc
Confidence 8899875 2468899998654444432 22 1 2223322 2 2577764 3689999998
Q ss_pred CCc
Q 012755 375 NNS 377 (457)
Q Consensus 375 ~~~ 377 (457)
++.
T Consensus 286 ~~~ 288 (296)
T 3e5z_A 286 VRG 288 (296)
T ss_dssp CCB
T ss_pred ccc
Confidence 764
No 181
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=94.02 E-value=5.1 Score=40.42 Aligned_cols=147 Identities=13% Similarity=0.111 Sum_probs=76.0
Q ss_pred EEEEeeecCCCCccceEEEEeCCCCcEEEC-CCCCCCC-cceeEEEE-C-CEEEEEeccCCCCCCCceEEEEECCCCceE
Q 012755 252 AIVAGGTDKNGCILKSAELYNSELGTWETL-PDMNLPR-KLCSGFFM-D-GKFYIIGGMSSPTDPLTCGEEYNLETRTWK 327 (457)
Q Consensus 252 iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~-~~~p~~r-~~~~~~~~-~-g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 327 (457)
+++.|+.+ ..+.+||..+.+-... ....... .-.+++.. + ++.++.|+.+ ..+.+||..+.+..
T Consensus 175 ~l~~~~~d------~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~ 242 (615)
T 1pgu_A 175 RSMTVGDD------GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSD------RKISCFDGKSGEFL 242 (615)
T ss_dssp EEEEEETT------TEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETT------CCEEEEETTTCCEE
T ss_pred EEEEEeCC------CcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCC------CeEEEEECCCCCEe
Confidence 66666643 4688889877654322 1111100 11222222 4 6666666543 35788998887654
Q ss_pred EcC-CCC-CCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCE
Q 012755 328 RIE-NMY-PSNVGTQSNPAMSSPPLVAVV-NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNS 404 (457)
Q Consensus 328 ~~~-~~~-~~~~~~~~~~~~r~~~~~~~~-~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~ 404 (457)
..- ... . .......+.. ++..++.++..+.+..||..+.+-...-..+..... .....+...++.
T Consensus 243 ~~~~~~~~~----------~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 310 (615)
T 1pgu_A 243 KYIEDDQEP----------VQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLG--NQQVGVVATGNG 310 (615)
T ss_dssp EECCBTTBC----------CCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGG--GCEEEEEEEETT
T ss_pred EEecccccc----------cCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCccc--CceeEEEeCCCC
Confidence 322 100 1 1112222222 777788887788999999988765433222211100 111222222566
Q ss_pred EEEEcCcCCCCCceEEEEEeeCCC
Q 012755 405 LLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 405 lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
.++.|+.++ .+.+||..+
T Consensus 311 ~l~~~~~~g------~i~~~d~~~ 328 (615)
T 1pgu_A 311 RIISLSLDG------TLNFYELGH 328 (615)
T ss_dssp EEEEEETTS------CEEEEETTE
T ss_pred eEEEEECCC------CEEEEECCC
Confidence 666666553 477788765
No 182
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=93.96 E-value=4.7 Score=38.81 Aligned_cols=221 Identities=12% Similarity=0.115 Sum_probs=114.4
Q ss_pred ccEEEEEecCccEEEEeCCC--CcEEeCCC-CCCCccccCCCeeeEEe---CCEEEEEceec-CCcEEEEEECCCCcEEe
Q 012755 160 EHWVYLACILMPWEAFDPLR--QRWMRLPR-MQCDECFTSADKESLAV---GTQLLVFGREL-SGFAIWMYSLIANCWSK 232 (457)
Q Consensus 160 ~~~l~~~~~~~~~~~ydp~~--~~W~~l~~-~p~~~~~~~~~~~~~~~---~~~lyv~GG~~-~~~~v~~yd~~t~~W~~ 232 (457)
+..||+.. ..-++.++... .+|..+.. +.... . ..++.- .+.||+.+... ....+++.+....+|+.
T Consensus 22 ~g~l~vgt-~~Gl~~~~~~~~g~~W~~~~~~~~~~~----v-~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~ 95 (394)
T 3b7f_A 22 PVMLLVAT-IKGAWFLASDPARRTWELRGPVFLGHT----I-HHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTE 95 (394)
T ss_dssp CCEEEEEE-TTEEEEEEECTTSCSEEEEEEESTTSE----E-EEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEE
T ss_pred CCEEEEEe-cCceEEEECCCCCCCceECCccCCCCc----e-EEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceE
Confidence 44566654 44577777654 68987531 11111 1 112222 46788765321 11257888888889998
Q ss_pred CCCC---CCC--c-------cceeEEee----CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCC---CC-------
Q 012755 233 CPQM---NLP--R-------CLFGSSSL----GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDM---NL------- 286 (457)
Q Consensus 233 l~~l---p~~--r-------~~~~~~~~----~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~---p~------- 286 (457)
+... +.. + ...+++.- .+.||+.+. ...+++.+-...+|+.+... |.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~-------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~ 168 (394)
T 3b7f_A 96 ATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS-------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGG 168 (394)
T ss_dssp CSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE-------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCC
T ss_pred CCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec-------CCcEEEEcCCCCCeEECcCccCCccccccccc
Confidence 7532 211 1 11123332 467776532 13577777778899987431 21
Q ss_pred -------CCcceeEEEE---CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCC-----CCCCCEE
Q 012755 287 -------PRKLCSGFFM---DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPA-----MSSPPLV 351 (457)
Q Consensus 287 -------~r~~~~~~~~---~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-----~r~~~~~ 351 (457)
....+++++. .+.||+.... ..+++.+-...+|+.+...... ...+. ....+.+
T Consensus 169 ~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~-------ggl~~s~DgG~tW~~~~~~~~~----~~~p~~~~~~g~~~~~i 237 (394)
T 3b7f_A 169 EQDGTPDGPKMHSILVDPRDPKHLYIGMSS-------GGVFESTDAGTDWKPLNRGCAA----NFLPDPNVEFGHDPHCV 237 (394)
T ss_dssp C----CCCCEEEEEEECTTCTTCEEEEEET-------BEEEEESSTTSSCEECCTTCCC----TTSSSSSSSSCBCEEEE
T ss_pred cccCCCCCCceeEEEECCCCCCEEEEEECC-------CCEEEECCCCCCceECCCCccc----cccCCCccccCcceeEE
Confidence 1112233332 3568875321 2466777777899988542110 00000 0112233
Q ss_pred EEE-C--CEEEEEecCCCeEEEEECCCCcEEEecc-CCCccCCCCcceEEEEE---eCCEEEEEc
Q 012755 352 AVV-N--NQLYSADQATNVVKKYNKTNNSWTVVKR-LPVRANSFNGWGLAFKA---CGNSLLVIG 409 (457)
Q Consensus 352 ~~~-~--g~ly~~gg~~~~v~~Yd~~~~~W~~v~~-~p~~~~~~~~~~~~~~~---~~g~lyv~G 409 (457)
++. + +.||+.. ...|++++....+|+.+.. +|.... ..+..+.. ..+.||+..
T Consensus 238 ~~~~~~~~~l~vg~--~~gl~~s~D~G~tW~~~~~~l~~~~~---~~~~~i~~~p~~~~~l~~~t 297 (394)
T 3b7f_A 238 VQHPAAPDILYQQN--HCGIYRMDRREGVWKRIGDAMPREVG---DIGFPIVVHQRDPRTVWVFP 297 (394)
T ss_dssp EECSSSTTEEEEEE--TTEEEEEETTTTEEECGGGGSCTTTC---SCEEEEEECSSCTTCEEEEE
T ss_pred EECCCCCCEEEEEc--CCeEEEeCCCCCcceECCCCCCCCCc---cceEEEEECCCCCCEEEEEe
Confidence 332 1 6777753 3569999989999999864 443110 12233333 246788864
No 183
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=93.82 E-value=0.05 Score=52.80 Aligned_cols=185 Identities=15% Similarity=0.054 Sum_probs=76.5
Q ss_pred EEeCCEEEEEceecCCcEEEEEECCCCc--EEeCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCC--c
Q 012755 202 LAVGTQLLVFGRELSGFAIWMYSLIANC--WSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELG--T 277 (457)
Q Consensus 202 ~~~~~~lyv~GG~~~~~~v~~yd~~t~~--W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~--~ 277 (457)
++.++.||+.+. ...++.+|..+++ |+.-. ... ..+.+..++.+|+.++.+ ..+..+|.+++ .
T Consensus 6 ~v~~~~v~~gs~---dg~v~a~d~~tG~~~W~~~~--~~~--~s~p~~~~g~~~v~~s~d------g~l~a~d~~tG~~~ 72 (369)
T 2hz6_A 6 TLPETLLFVSTL---DGSLHAVSKRTGSIKWTLKE--DPV--LQVPTHVEEPAFLPDPND------GSLYTLGSKNNEGL 72 (369)
T ss_dssp --CTTEEEEEET---TSEEEEEETTTCCEEEEEEC--CCS--CCCC-----CCEEECTTT------CCEEEC-----CCS
T ss_pred eeeCCEEEEEcC---CCEEEEEECCCCCEEEEecC--CCc--eecceEcCCCEEEEeCCC------CEEEEEECCCCcee
Confidence 445677776542 2368999988774 76532 111 112234466777775432 45888998765 4
Q ss_pred EEECCCCCCCCcceeEEE-ECCEEEEEeccCCCCCCCceEEEEECCCCc--eEEcCCCCCCCCCCCCCCCCCCCCEEEEE
Q 012755 278 WETLPDMNLPRKLCSGFF-MDGKFYIIGGMSSPTDPLTCGEEYNLETRT--WKRIENMYPSNVGTQSNPAMSSPPLVAVV 354 (457)
Q Consensus 278 W~~~~~~p~~r~~~~~~~-~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 354 (457)
|+.-...+... ..+.++ .++.+|+ |+. ...+.++|+++++ |+.-.... .+.. -.
T Consensus 73 w~~~~~~~~~~-~~sp~~~~~~~v~~-g~~------dg~v~a~D~~tG~~~w~~~~~~~-----------~~~~----p~ 129 (369)
T 2hz6_A 73 TKLPFTIPELV-QASPCRSSDGILYM-GKK------QDIWYVIDLLTGEKQQTLSSAFA-----------DSLS----PS 129 (369)
T ss_dssp EECSCCHHHHH-TTCSCC-----CCC-CEE------EEEEEEECCC----------------------------------
T ss_pred eeeeccCcccc-ccCceEecCCEEEE-EeC------CCEEEEEECCCCcEEEEecCCCc-----------cccc----cc
Confidence 76432211100 111122 3566664 221 2357889988764 65322110 1111 13
Q ss_pred CCEEEEEecCCCeEEEEECCCCc--EEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCCCCC
Q 012755 355 NNQLYSADQATNVVKKYNKTNNS--WTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDGNSG 432 (457)
Q Consensus 355 ~g~ly~~gg~~~~v~~Yd~~~~~--W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~~w~ 432 (457)
++.||+ +...+.+..||+++++ |+.-..-....... .- ...++.+|+.. .+ ..++.||+.+ +
T Consensus 130 ~~~v~~-~~~dg~v~a~d~~tG~~~W~~~~~~~~~~~~~-~~----~~~~~~v~~~~-~d------g~v~a~d~~t---G 193 (369)
T 2hz6_A 130 TSLLYL-GRTEYTITMYDTKTRELRWNATYFDYAASLPE-DD----VDYKMSHFVSN-GD------GLVVTVDSES---G 193 (369)
T ss_dssp ---EEE-EEEEEEEECCCSSSSSCCCEEEEEEECCBCCC-CC----TTCCCCEEEEE-TS------CEEEEECTTT---C
T ss_pred CCEEEE-EecCCEEEEEECCCCCEEEeEecccccCcccc-CC----ccccceEEEEC-CC------CEEEEEECCC---C
Confidence 455554 4444678899988764 87531100000000 00 01236666633 22 1588889887 5
Q ss_pred CCCeeE
Q 012755 433 EAQWNE 438 (457)
Q Consensus 433 ~~~W~~ 438 (457)
+..|+.
T Consensus 194 ~~~W~~ 199 (369)
T 2hz6_A 194 DVLWIQ 199 (369)
T ss_dssp CEEEEE
T ss_pred cEEEEe
Confidence 667863
No 184
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=93.80 E-value=5.1 Score=38.68 Aligned_cols=227 Identities=9% Similarity=0.104 Sum_probs=104.9
Q ss_pred EEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccc
Q 012755 163 VYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCL 242 (457)
Q Consensus 163 l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~ 242 (457)
++.++..+.+..+|..+.+...+-.+......-. ......++..++.|+.+ ..+.+||..+++-.....-... .
T Consensus 118 ~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~--sv~fspdg~~lasgs~D--g~v~iWd~~~~~~~~~~~~h~~--~ 191 (420)
T 4gga_A 118 VLAVALDNSVYLWSASSGDILQLLQMEQPGEYIS--SVAWIKEGNYLAVGTSS--AEVQLWDVQQQKRLRNMTSHSA--R 191 (420)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEE--EEEECTTSSEEEEEETT--SCEEEEETTTTEEEEEECCCSS--C
T ss_pred EEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEE--EEEECCCCCEEEEEECC--CeEEEEEcCCCcEEEEEeCCCC--c
Confidence 4444446788899998887654432221111100 01122356677777654 3588899988764332111111 1
Q ss_pred eeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEE--EECCEEEEEeccCCCCCCCceEEEEE
Q 012755 243 FGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGF--FMDGKFYIIGGMSSPTDPLTCGEEYN 320 (457)
Q Consensus 243 ~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~--~~~g~iyv~GG~~~~~~~~~~~~~yd 320 (457)
......++.+.+.|+.+ ..+..+|..+...... .+.......... ..++...+.|+.+ +.+.++|
T Consensus 192 v~~~s~~~~~l~sgs~d------~~i~~~d~~~~~~~~~-~~~~h~~~~~~~~~~~~g~~l~s~~~D------~~v~i~~ 258 (420)
T 4gga_A 192 VGSLSWNSYILSSGSRS------GHIHHHDVRVAEHHVA-TLSGHSQEVCGLRWAPDGRHLASGGND------NLVNVWP 258 (420)
T ss_dssp EEEEEEETTEEEEEETT------SEEEEEETTSSSCEEE-EEECCSSCEEEEEECTTSSEEEEEETT------SCEEEEE
T ss_pred eEEEeeCCCEEEEEeCC------CceeEeeecccceeeE-EecccccceeeeeecCCCCeeeeeecc------ccceEEe
Confidence 22334566777777643 3566777655432211 000011111111 1245555555433 3456677
Q ss_pred CCCCc--eEEcCCCCCCCCCCCCCCCCCCCCEEEEE---CCEEEEE-ec-CCCeEEEEECCCCcEEEeccCCCccCCCCc
Q 012755 321 LETRT--WKRIENMYPSNVGTQSNPAMSSPPLVAVV---NNQLYSA-DQ-ATNVVKKYNKTNNSWTVVKRLPVRANSFNG 393 (457)
Q Consensus 321 ~~t~~--W~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~g~ly~~-gg-~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~ 393 (457)
..++. +..+..... .......... +..+++. +| .-+.|..||..++.-...-......
T Consensus 259 ~~~~~~~~~~~~~~~~----------~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v----- 323 (420)
T 4gga_A 259 SAPGEGGWVPLQTFTQ----------HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQV----- 323 (420)
T ss_dssp SSCCSSCSCCSEEECC----------CSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCE-----
T ss_pred eccccccceeeeeecc----------cCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccce-----
Confidence 66543 111111111 1111111222 3344444 34 3468999999887644332211111
Q ss_pred ceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 394 WGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 394 ~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
........++.+++.+|.... .+.+||..+
T Consensus 324 ~~~~~~~~~~~lv~~sg~~d~-----~I~iwd~~~ 353 (420)
T 4gga_A 324 CSILWSPHYKELISGHGFAQN-----QLVIWKYPT 353 (420)
T ss_dssp EEEEEETTTTEEEEEECTTTC-----CEEEEETTT
T ss_pred eeeeecCCCCeEEEEEecCCC-----EEEEEECCC
Confidence 111122224556665554322 478888876
No 185
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=93.68 E-value=4.4 Score=37.56 Aligned_cols=64 Identities=8% Similarity=0.058 Sum_probs=36.3
Q ss_pred CEEEEEecCCCeEEEEECCCCcEE--EeccCCCccCCCCcceEEEE-EeCCEEEEEcCcCCCCCceEEEEEeeCC
Q 012755 356 NQLYSADQATNVVKKYNKTNNSWT--VVKRLPVRANSFNGWGLAFK-ACGNSLLVIGGHRELQGEIIVLHSWDPT 427 (457)
Q Consensus 356 g~ly~~gg~~~~v~~Yd~~~~~W~--~v~~~p~~~~~~~~~~~~~~-~~~g~lyv~GG~~~~~~~~~~v~~y~~~ 427 (457)
+++++.|+..+.|..||..+..-. .+..+...... ..-..+. .-++++++.|+.++ .+.+||..
T Consensus 299 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~s~~~dg------~i~iwd~~ 365 (366)
T 3k26_A 299 QKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCG--AAIRQTSFSRDSSILIAVCDDA------SIWRWDRL 365 (366)
T ss_dssp SSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCC--SCEEEEEECTTSSEEEEEETTS------EEEEEEC-
T ss_pred CcEEEEEecCCcEEEEECCCCCCccccceEEcccccC--CceEEEEeCCCCCeEEEEeCCC------EEEEEEec
Confidence 788888888889999999876311 11112211100 1111122 23677777787664 58888875
No 186
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=93.63 E-value=0.78 Score=42.57 Aligned_cols=175 Identities=10% Similarity=0.085 Sum_probs=86.3
Q ss_pred ccEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEE-eCCEEEEEceecCCcEEEEEECCCC-cEEeCCCCC
Q 012755 160 EHWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLA-VGTQLLVFGRELSGFAIWMYSLIAN-CWSKCPQMN 237 (457)
Q Consensus 160 ~~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~v~~yd~~t~-~W~~l~~lp 237 (457)
++.+|+......+.+|| .+.+-.....++... .. ..+. .++.||+... . ++.||+..+ .|+.-.+
T Consensus 30 ~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~--~~---~~~~~~~g~l~v~t~----~-l~~~d~~g~~~~~~~~~-- 96 (330)
T 3hxj_A 30 NGTIYLGSSNKNLYAIN-TDGSVKWFFKSGEII--EC---RPSIGKDGTIYFGSD----K-VYAINPDGTEKWRFDTK-- 96 (330)
T ss_dssp TSCEECSSTTTTTEEEC-TTSCEEESSCGGGEE--EE---CCEETTTTEECCSSC----E-EEEECCCGGGGGGSCC---
T ss_pred CCeEEEEcCCCEEEEEC-CCCcEEEEEecCCCc--cc---ceEEecCCcEEEecC----c-EEEECCCCcEEEEEECC--
Confidence 45666654455688899 555321111121111 01 1222 3677776321 2 889997432 3543211
Q ss_pred CCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCC-CCcEEECCCCCCCCcceeEEEE-CCEEEEEeccCCCCCCCce
Q 012755 238 LPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSE-LGTWETLPDMNLPRKLCSGFFM-DGKFYIIGGMSSPTDPLTC 315 (457)
Q Consensus 238 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~-t~~W~~~~~~p~~r~~~~~~~~-~g~iyv~GG~~~~~~~~~~ 315 (457)
... ....+..++.||+... ...+..||+. +..|+...+.+. ..+.+.. +|.||+.. ....
T Consensus 97 ~~~-~~~~~~~~~~l~v~t~-------~~~l~~~d~~g~~~~~~~~~~~~---~~~~~~~~~g~l~vgt-------~~~~ 158 (330)
T 3hxj_A 97 KAI-VSDFTIFEDILYVTSM-------DGHLYAINTDGTEKWRFKTKKAI---YATPIVSEDGTIYVGS-------NDNY 158 (330)
T ss_dssp -----CCEEEETTEEEEECT-------TSEEEEECTTSCEEEEEECSSCC---CSCCEECTTSCEEEEC-------TTSE
T ss_pred CCc-ccCceEECCEEEEEec-------CCEEEEEcCCCCEEEEEcCCCce---eeeeEEcCCCEEEEEc-------CCCE
Confidence 111 1122334888887421 2468889988 334765432221 1222333 67787742 1246
Q ss_pred EEEEECCCC-ceEEcCCCCCCCCCCCCCCCCCCCCEEEE-ECCEEEEEecCCCeEEEEECCC-CcEEEe
Q 012755 316 GEEYNLETR-TWKRIENMYPSNVGTQSNPAMSSPPLVAV-VNNQLYSADQATNVVKKYNKTN-NSWTVV 381 (457)
Q Consensus 316 ~~~yd~~t~-~W~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~g~ly~~gg~~~~v~~Yd~~~-~~W~~v 381 (457)
+.+||+... .|..-.. . .. ....+. -+|.||+.. +.++.||... ..|+.-
T Consensus 159 l~~~d~~g~~~~~~~~~--~----------~~-~~~~~~d~~g~l~v~t---~~l~~~d~~g~~~~~~~ 211 (330)
T 3hxj_A 159 LYAINPDGTEKWRFKTN--D----------AI-TSAASIGKDGTIYFGS---DKVYAINPDGTEKWNFY 211 (330)
T ss_dssp EEEECTTSCEEEEEECS--S----------CC-CSCCEECTTCCEEEES---SSEEEECTTSCEEEEEC
T ss_pred EEEECCCCCEeEEEecC--C----------Cc-eeeeEEcCCCEEEEEe---CEEEEECCCCcEEEEEc
Confidence 888998822 3654321 1 11 112233 367777654 7889999543 257654
No 187
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=93.61 E-value=5.6 Score=38.57 Aligned_cols=208 Identities=9% Similarity=0.039 Sum_probs=113.4
Q ss_pred ccEEEEEecCccEEEEeCCCCcEEeCCC-CCCCccccCCCeeeEE--eCCEEEEEceecCCcEEEEEECCCC----cEEe
Q 012755 160 EHWVYLACILMPWEAFDPLRQRWMRLPR-MQCDECFTSADKESLA--VGTQLLVFGRELSGFAIWMYSLIAN----CWSK 232 (457)
Q Consensus 160 ~~~l~~~~~~~~~~~ydp~~~~W~~l~~-~p~~~~~~~~~~~~~~--~~~~lyv~GG~~~~~~v~~yd~~t~----~W~~ 232 (457)
+++|++.. ...+...|+....+..+.. +..+ ..+.. .++.||+..- ....++++++... ....
T Consensus 83 ~~~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~-------~~l~~d~~~~~lywsD~--~~~~I~~~~~~g~~~~~~~~~ 152 (400)
T 3p5b_L 83 IAYLFFTN-RHEVRKMTLDRSEYTSLIPNLRNV-------VALDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDT 152 (400)
T ss_dssp SCEEEEEE-TTEEEEECTTSCSCEEEECSCSCE-------EEEEEETTTTEEEEEET--TTTEEEEEEC------CCCEE
T ss_pred cceeEEec-cceeEEEccCCcceeEeccccCcc-------eEEeeeeccCceEEEec--CCCeEEEEEcccCCCCCcceE
Confidence 45555543 5778888888776655432 1111 11222 2678888642 2357888888642 1222
Q ss_pred -CC-CCCCCccceeEEe--eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECC--CCCCCCcceeEEEE--CCEEEEEe
Q 012755 233 -CP-QMNLPRCLFGSSS--LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLP--DMNLPRKLCSGFFM--DGKFYIIG 304 (457)
Q Consensus 233 -l~-~lp~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~--~~p~~r~~~~~~~~--~g~iyv~G 304 (457)
+. .+..| .++++ .++.||+.-. ....++++|+....-+.+. .+..| .++++- +|.||+..
T Consensus 153 ~~~~~~~~p---~glavD~~~~~lY~~d~------~~~~I~~~~~~g~~~~~l~~~~~~~P---~~iavdp~~g~ly~td 220 (400)
T 3p5b_L 153 VISRDIQAP---DGLAVDWIHSNIYWTDS------VLGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTD 220 (400)
T ss_dssp EECSSCSCE---EEEEEETTTTEEEEEET------TTTEEEEECTTTCSEEEEEECSSCCE---EEEEEETTTTEEEEEE
T ss_pred EEeCCCCCc---ccEEEEecCCceEEEEC------CCCeEEEEeCCCCceEEEEeCCCCCc---ceEEEecccCeEEEEe
Confidence 22 22222 23333 4789999843 2357889998877655442 22222 233442 68999974
Q ss_pred ccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEec
Q 012755 305 GMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSWTVVK 382 (457)
Q Consensus 305 G~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~~v~ 382 (457)
-. ....++++++....=..+..- . .....++++- +++||+.....+.|+.+|.+...=+.+.
T Consensus 221 ~~-----~~~~I~~~~~dG~~~~~~~~~-~----------l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~ 284 (400)
T 3p5b_L 221 WG-----TPAKIKKGGLNGVDIYSLVTE-N----------IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 284 (400)
T ss_dssp CS-----SSCCEEEEETTSCSCEEEECS-S----------CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEE
T ss_pred CC-----CCCEEEEEeCCCCccEEEEEC-C----------CCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEE
Confidence 21 124688888875433332110 0 1112234444 6899999988889999999865433333
Q ss_pred cCCCccCCCCcceEEEEEeCCEEEEEc
Q 012755 383 RLPVRANSFNGWGLAFKACGNSLLVIG 409 (457)
Q Consensus 383 ~~p~~~~~~~~~~~~~~~~~g~lyv~G 409 (457)
..+... ....+++..++.||+.-
T Consensus 285 ~~~~~l----~~P~gl~v~~~~lywtd 307 (400)
T 3p5b_L 285 EDEKRL----AHPFSLAVFEDKVFWTD 307 (400)
T ss_dssp ECSSTT----SSEEEEEEETTEEEEEE
T ss_pred eCCCCC----CCCEEEEEeCCEEEEec
Confidence 221111 11234556788999875
No 188
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=93.59 E-value=7.9 Score=40.20 Aligned_cols=239 Identities=13% Similarity=0.022 Sum_probs=116.3
Q ss_pred CccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCC-----CcEEeCCCCCCCcc--
Q 012755 169 LMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIA-----NCWSKCPQMNLPRC-- 241 (457)
Q Consensus 169 ~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t-----~~W~~l~~lp~~r~-- 241 (457)
...++.+|..+.+-..+...+.. ... .....++..+++.. ...++++|..+ ++...+........
T Consensus 100 ~~~i~~~d~~~~~~~~l~~~~~~--~~~---~~~SpdG~~la~~~---~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~ 171 (706)
T 2z3z_A 100 QGGLVGFDMLARKVTYLFDTNEE--TAS---LDFSPVGDRVAYVR---NHNLYIARGGKLGEGMSRAIAVTIDGTETLVY 171 (706)
T ss_dssp TTEEEEEETTTTEEEEEECCTTC--CTT---CEECTTSSEEEEEE---TTEEEEEECBCTTSCCCCCEESCSCCBTTEEE
T ss_pred CCEEEEEECCCCceEEccCCccc--ccC---CcCCCCCCEEEEEE---CCeEEEEecCcccccCCCcEEeccCCCCCeEc
Confidence 36677888877765554322111 111 12334454333332 25789999888 77666543322210
Q ss_pred -----------ceeEE-eeCCEEEEEeeecCC---------------------------CCccceEEEEeCCCCcEEECC
Q 012755 242 -----------LFGSS-SLGEVAIVAGGTDKN---------------------------GCILKSAELYNSELGTWETLP 282 (457)
Q Consensus 242 -----------~~~~~-~~~~~iyv~GG~~~~---------------------------~~~~~~v~~yd~~t~~W~~~~ 282 (457)
..+++ .-+++.++++..+.. ......++++|..+++-..+.
T Consensus 172 g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~ 251 (706)
T 2z3z_A 172 GQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQ 251 (706)
T ss_dssp SSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECC
T ss_pred ccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeec
Confidence 01121 225555555543211 113467899999998876664
Q ss_pred CCCCCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCC-ceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCE
Q 012755 283 DMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETR-TWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQ 357 (457)
Q Consensus 283 ~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~-~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ 357 (457)
...........+.. +|+..+++..+.. .....+..+|+.++ ....+...... ... .........- +|+
T Consensus 252 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~~v~~~d~~~g~~~~~~~~~~~~-----~~~-~~~~~~~~sp~~dg~ 324 (706)
T 2z3z_A 252 TGEPKEKFLTNLSWSPDENILYVAEVNRA-QNECKVNAYDAETGRFVRTLFVETDK-----HYV-EPLHPLTFLPGSNNQ 324 (706)
T ss_dssp CCSCTTCEEEEEEECTTSSEEEEEEECTT-SCEEEEEEEETTTCCEEEEEEEEECS-----SCC-CCCSCCEECTTCSSE
T ss_pred cCCCCceeEeeEEEECCCCEEEEEEeCCC-CCeeEEEEEECCCCceeeEEEEccCC-----CeE-CccCCceeecCCCCE
Confidence 32211122222222 5653344333221 12457889999998 66655421110 000 0001112223 777
Q ss_pred EEEEecC--CCeEEEEECCCCcEEEeccCCCccCCCCcce-EEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 358 LYSADQA--TNVVKKYNKTNNSWTVVKRLPVRANSFNGWG-LAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 358 ly~~gg~--~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~-~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
+++.+.. ...++.+|...+..+.+..-.... .. .+....++.||+.+...+.. ...++.+|.++.
T Consensus 325 ~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v-----~~~~~~spdg~~l~~~~~~~~~~--~~~l~~~d~~~~ 392 (706)
T 2z3z_A 325 FIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEV-----TNFAGFDPKGTRLYFESTEASPL--ERHFYCIDIKGG 392 (706)
T ss_dssp EEEEECTTSSCEEEEEETTSCEEEECCCSSSCE-----EEEEEECTTSSEEEEEESSSCTT--CBEEEEEETTCC
T ss_pred EEEEEccCCccEEEEEECCCCEEEecCCCCeEE-----EeeeEEcCCCCEEEEEecCCCCc--eEEEEEEEcCCC
Confidence 6655532 356888887777777664321111 01 11111234677666543321 246888888764
No 189
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=93.55 E-value=2 Score=40.71 Aligned_cols=143 Identities=7% Similarity=0.023 Sum_probs=78.1
Q ss_pred EEEEEeeecCCCCccceEEEEeCCCCcEEECCCCC-CCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceE
Q 012755 251 VAIVAGGTDKNGCILKSAELYNSELGTWETLPDMN-LPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWK 327 (457)
Q Consensus 251 ~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p-~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 327 (457)
.+++.|+.+ ..+.+||..++.....-... ....-.+++.. ++.+.+.|+.+ ..+..||..+....
T Consensus 87 ~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~ 154 (383)
T 3ei3_B 87 TTVAVGSKG------GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR------GATTLRDFSGSVIQ 154 (383)
T ss_dssp TEEEEEEBT------SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT------TEEEEEETTSCEEE
T ss_pred CEEEEEcCC------CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC------CEEEEEECCCCceE
Confidence 466666643 36888999887765543321 12222233333 34566665432 46788999887666
Q ss_pred EcCCCCCCCCCCCCCCCCCCCCEEEE--ECCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEE-eCCE
Q 012755 328 RIENMYPSNVGTQSNPAMSSPPLVAV--VNNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKA-CGNS 404 (457)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~r~~~~~~~--~~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~-~~g~ 404 (457)
.+..... .......+. -++..++.|+..+.+..||.....-..+...... -..+.. -++.
T Consensus 155 ~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~-------v~~~~~~~~~~ 217 (383)
T 3ei3_B 155 VFAKTDS----------WDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAK-------VTHAEFNPRCD 217 (383)
T ss_dssp EEECCCC----------SSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSC-------EEEEEECSSCT
T ss_pred EEeccCC----------CCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCc-------EEEEEECCCCC
Confidence 5543221 111112222 2677777888888999999965544443321111 111222 2344
Q ss_pred -EEEEcCcCCCCCceEEEEEeeCCC
Q 012755 405 -LLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 405 -lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
+++.|+.++ .+.+||..+
T Consensus 218 ~~l~s~~~d~------~i~iwd~~~ 236 (383)
T 3ei3_B 218 WLMATSSVDA------TVKLWDLRN 236 (383)
T ss_dssp TEEEEEETTS------EEEEEEGGG
T ss_pred CEEEEEeCCC------EEEEEeCCC
Confidence 677776653 577777765
No 190
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=93.54 E-value=5.2 Score=37.98 Aligned_cols=194 Identities=6% Similarity=-0.125 Sum_probs=102.3
Q ss_pred eCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECC
Q 012755 204 VGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLP 282 (457)
Q Consensus 204 ~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~ 282 (457)
.+|.+.++++......+.++|+.+.+-........+ -.+++. -++++++.|+. ..+.+++..++......
T Consensus 143 pDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~--V~~v~fspdg~~l~s~s~-------~~~~~~~~~~~~~~~~~ 213 (365)
T 4h5i_A 143 REGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGE--VKDLHFSTDGKVVAYITG-------SSLEVISTVTGSCIARK 213 (365)
T ss_dssp TTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSC--CCEEEECTTSSEEEEECS-------SCEEEEETTTCCEEEEE
T ss_pred CCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCc--eEEEEEccCCceEEeccc-------eeEEEEEeccCcceeee
Confidence 355555444333345788999998775443211111 122222 25666665541 34667777777654322
Q ss_pred CCCCCCc--ceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCC--CCCCCCCCCCCCCCCCCCEEEEE--CC
Q 012755 283 DMNLPRK--LCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIEN--MYPSNVGTQSNPAMSSPPLVAVV--NN 356 (457)
Q Consensus 283 ~~p~~r~--~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~--~~~~~~~~~~~~~~r~~~~~~~~--~g 356 (457)
....... ......-+++..+.++.++.. ...+..+|........... ... .......+.+ +|
T Consensus 214 ~~~~~~~~v~~v~fspdg~~l~~~s~d~~~--~~~i~~~~~~~~~~~~~~~~~~~~----------~~~~V~~~~~Spdg 281 (365)
T 4h5i_A 214 TDFDKNWSLSKINFIADDTVLIAASLKKGK--GIVLTKISIKSGNTSVLRSKQVTN----------RFKGITSMDVDMKG 281 (365)
T ss_dssp CCCCTTEEEEEEEEEETTEEEEEEEESSSC--CEEEEEEEEETTEEEEEEEEEEES----------SCSCEEEEEECTTS
T ss_pred ecCCCCCCEEEEEEcCCCCEEEEEecCCcc--eeEEeecccccceecceeeeeecC----------CCCCeEeEEECCCC
Confidence 2211111 112234478888877655432 2346677776665543321 111 1111122222 78
Q ss_pred EEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEE-EEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 357 QLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAF-KACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 357 ~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~-~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
++++.|+..+.|..||.++.+= +...... |...-..+ ..-+|++++.|+.++ .+.+|+...+
T Consensus 282 ~~lasgs~D~~V~iwd~~~~~~--~~~~~~g---H~~~V~~v~fSpdg~~laS~S~D~------tvrvw~ip~~ 344 (365)
T 4h5i_A 282 ELAVLASNDNSIALVKLKDLSM--SKIFKQA---HSFAITEVTISPDSTYVASVSAAN------TIHIIKLPLN 344 (365)
T ss_dssp CEEEEEETTSCEEEEETTTTEE--EEEETTS---SSSCEEEEEECTTSCEEEEEETTS------EEEEEECCTT
T ss_pred CceEEEcCCCEEEEEECCCCcE--EEEecCc---ccCCEEEEEECCCCCEEEEEeCCC------eEEEEEcCCC
Confidence 8888898888999999987642 2221111 11111122 223788888887764 6888887654
No 191
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=93.50 E-value=3.5 Score=38.22 Aligned_cols=143 Identities=11% Similarity=0.052 Sum_probs=73.0
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEe---eCCEEEEEeeecCCCCccceEEEEeCCCCcEEEC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSS---LGEVAIVAGGTDKNGCILKSAELYNSELGTWETL 281 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~---~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~ 281 (457)
++..++.|+. ...+.+||..+++......... .-.+++. -++.+++.|+.+ ..+.+||..+++-...
T Consensus 97 ~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~~~ 166 (368)
T 3mmy_A 97 DGSKVFTASC--DKTAKMWDLSSNQAIQIAQHDA--PVKTIHWIKAPNYSCVMTGSWD------KTLKFWDTRSSNPMMV 166 (368)
T ss_dssp TSSEEEEEET--TSEEEEEETTTTEEEEEEECSS--CEEEEEEEECSSCEEEEEEETT------SEEEEECSSCSSCSEE
T ss_pred CCCEEEEEcC--CCcEEEEEcCCCCceeeccccC--ceEEEEEEeCCCCCEEEEccCC------CcEEEEECCCCcEEEE
Confidence 5555555553 3478899998887655422111 1222332 356667777643 4688899877652111
Q ss_pred CCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCc--eEEcCCCCCCCCCCCCCCCCCCCCEEEEECC---
Q 012755 282 PDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRT--WKRIENMYPSNVGTQSNPAMSSPPLVAVVNN--- 356 (457)
Q Consensus 282 ~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g--- 356 (457)
+.............+.+++.++ ...+..||..+.. +..+..... ..........+.
T Consensus 167 --~~~~~~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 227 (368)
T 3mmy_A 167 --LQLPERCYCADVIYPMAVVATA-------ERGLIVYQLENQPSEFRRIESPLK----------HQHRCVAIFKDKQNK 227 (368)
T ss_dssp --EECSSCEEEEEEETTEEEEEEG-------GGCEEEEECSSSCEEEEECCCSCS----------SCEEEEEEEECTTSC
T ss_pred --EecCCCceEEEecCCeeEEEeC-------CCcEEEEEeccccchhhhcccccc----------CCCceEEEcccCCCC
Confidence 1111122233344555544432 2346778876653 333332211 111111111222
Q ss_pred -EEEEEecCCCeEEEEECCCC
Q 012755 357 -QLYSADQATNVVKKYNKTNN 376 (457)
Q Consensus 357 -~ly~~gg~~~~v~~Yd~~~~ 376 (457)
..++.++..+.+..||....
T Consensus 228 ~~~~~~~~~dg~i~i~~~~~~ 248 (368)
T 3mmy_A 228 PTGFALGSIEGRVAIHYINPP 248 (368)
T ss_dssp EEEEEEEETTSEEEEEESSCS
T ss_pred CCeEEEecCCCcEEEEecCCC
Confidence 33667777889999998875
No 192
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=93.41 E-value=5.2 Score=41.20 Aligned_cols=186 Identities=9% Similarity=-0.050 Sum_probs=101.4
Q ss_pred ccEEEEeCCC------CcEEeCC-CCCCCccccCCCeeeEEeCCEEEEEce-ec-----CCcEEEEEECC-CC---cEEe
Q 012755 170 MPWEAFDPLR------QRWMRLP-RMQCDECFTSADKESLAVGTQLLVFGR-EL-----SGFAIWMYSLI-AN---CWSK 232 (457)
Q Consensus 170 ~~~~~ydp~~------~~W~~l~-~~p~~~~~~~~~~~~~~~~~~lyv~GG-~~-----~~~~v~~yd~~-t~---~W~~ 232 (457)
..++.+|..+ .....+. .-+ ..... .....+|+.+++.. .. ....++++|.. ++ +.+.
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~---~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~ 235 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAH--RFVTG---PRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRT 235 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCS--SEECC---CEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEE
T ss_pred eEEEEEECCCCccccCCceeEEEecCC--CcccC---ceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEE
Confidence 4677888877 5555544 211 11111 12344554444333 22 23579999998 56 4444
Q ss_pred CCCCCCCccceeEE-eeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCC----c---ceeEEEE-CCEEEEE
Q 012755 233 CPQMNLPRCLFGSS-SLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPR----K---LCSGFFM-DGKFYII 303 (457)
Q Consensus 233 l~~lp~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r----~---~~~~~~~-~g~iyv~ 303 (457)
+..-. .......+ .-++++|+.+..++ ...++.+|+.+++++.+.+..... . ....+.. ++++++.
T Consensus 236 l~~~~-~~~~~~~~~spdg~l~~~~~~~~----~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~ 310 (662)
T 3azo_A 236 LLGGP-EEAIAQAEWAPDGSLIVATDRTG----WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVV 310 (662)
T ss_dssp EEEET-TBCEEEEEECTTSCEEEEECTTS----SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEE
T ss_pred eCCCC-CceEcceEECCCCeEEEEECCCC----CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEE
Confidence 42211 11112222 22677777665432 247999999999998875432211 0 1123333 6777776
Q ss_pred eccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEE-EEECCEEEEEecCC---CeEEEEECCCCcEE
Q 012755 304 GGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLV-AVVNNQLYSADQAT---NVVKKYNKTNNSWT 379 (457)
Q Consensus 304 GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~g~ly~~gg~~---~~v~~Yd~~~~~W~ 379 (457)
+.. + ...++.+|+.++..+.+..... ....+ ..-++.++++.... ..++.+|.++++.+
T Consensus 311 ~~~-~----~~~l~~~d~~~~~~~~l~~~~~------------~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~ 373 (662)
T 3azo_A 311 HGK-G----AAVLGILDPESGELVDAAGPWT------------EWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRAR 373 (662)
T ss_dssp EBS-S----SCEEEEEETTTTEEEECCSSCC------------EEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred EEc-C----ccEEEEEECCCCcEEEecCCCC------------eEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceE
Confidence 543 2 3467788998888776643211 11122 33456666665432 37899999998888
Q ss_pred Eec
Q 012755 380 VVK 382 (457)
Q Consensus 380 ~v~ 382 (457)
.+.
T Consensus 374 ~l~ 376 (662)
T 3azo_A 374 TIG 376 (662)
T ss_dssp EEE
T ss_pred Eee
Confidence 775
No 193
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=93.40 E-value=2.7 Score=39.57 Aligned_cols=150 Identities=14% Similarity=0.094 Sum_probs=68.4
Q ss_pred EEEEEECCCCcEEeCCCCCCCccceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcc-eeEEEE
Q 012755 219 AIWMYSLIANCWSKCPQMNLPRCLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKL-CSGFFM 296 (457)
Q Consensus 219 ~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~-~~~~~~ 296 (457)
.++.+|+.+++++.+.........+.+..- +..||+.+..+.. ...-.++.+|..+++.+.+...+..... ...+.
T Consensus 30 ~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~-~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~- 107 (361)
T 3scy_A 30 YTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKD-QAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT- 107 (361)
T ss_dssp EEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSST-TCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE-
T ss_pred EEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCC-CCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE-
Confidence 456668888888765433111111111122 3457766543211 1123445566766777766544322222 22333
Q ss_pred CCE-EEEEeccCCCCCCCceEEEEECCCCc-eEEcCCCCCCCCCCCCCC---CCCCCCEEEEE-CC-EEEEEecCCCeEE
Q 012755 297 DGK-FYIIGGMSSPTDPLTCGEEYNLETRT-WKRIENMYPSNVGTQSNP---AMSSPPLVAVV-NN-QLYSADQATNVVK 369 (457)
Q Consensus 297 ~g~-iyv~GG~~~~~~~~~~~~~yd~~t~~-W~~~~~~~~~~~~~~~~~---~~r~~~~~~~~-~g-~ly~~gg~~~~v~ 369 (457)
+++ +|+.... ...+.+|+..++. ...+...... .+.+..+ .....+.++.. +| .||+.+...+.+.
T Consensus 108 dg~~l~~~~~~------~~~v~~~~~~~~g~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~ 180 (361)
T 3scy_A 108 NGKNIVTANYS------GGSITVFPIGQDGALLPASDVIEF-KGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIH 180 (361)
T ss_dssp CSSEEEEEETT------TTEEEEEEBCTTSCBCSCSEEEEC-CCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CCCEEEEEECC------CCEEEEEEeCCCCcCcccceeEEc-cCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEE
Confidence 655 6655321 2467888886532 2111110000 0000000 00011223322 55 4887776677888
Q ss_pred EEECCCCc
Q 012755 370 KYNKTNNS 377 (457)
Q Consensus 370 ~Yd~~~~~ 377 (457)
+|+.....
T Consensus 181 v~~~~~~~ 188 (361)
T 3scy_A 181 KFNINPNA 188 (361)
T ss_dssp EEEECTTC
T ss_pred EEEEcCCC
Confidence 88776543
No 194
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=93.27 E-value=5.5 Score=37.56 Aligned_cols=230 Identities=10% Similarity=0.022 Sum_probs=103.3
Q ss_pred EEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEe---CCEEEEEceecCCcEEEEEECCCCcEEe-CCCCC
Q 012755 162 WVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAV---GTQLLVFGRELSGFAIWMYSLIANCWSK-CPQMN 237 (457)
Q Consensus 162 ~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~---~~~lyv~GG~~~~~~v~~yd~~t~~W~~-l~~lp 237 (457)
.++..+....+..||..+.+-......+.+... ..... ++.+++.|+.. ..+.+||..+.+-.. +....
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~--~~v~~~d~~~~~~~~~~~~~~ 186 (408)
T 4a11_B 114 MFTSSSFDKTLKVWDTNTLQTADVFNFEETVYS-----HHMSPVSTKHCLVAVGTRG--PKVQLCDLKSGSCSHILQGHR 186 (408)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEECSSCEEE-----EEECSSCSSCCEEEEEESS--SSEEEEESSSSCCCEEECCCC
T ss_pred EEEEEeCCCeEEEeeCCCCccceeccCCCceee-----eEeecCCCCCcEEEEEcCC--CeEEEEeCCCcceeeeecCCC
Confidence 344444456678888877654332222211000 00111 33355656543 358888987654221 11111
Q ss_pred CCccceeEEee--CCEEEEEeeecCCCCccceEEEEeCCCCc--EEECCC--------C----CCCCcceeEEEE--CCE
Q 012755 238 LPRCLFGSSSL--GEVAIVAGGTDKNGCILKSAELYNSELGT--WETLPD--------M----NLPRKLCSGFFM--DGK 299 (457)
Q Consensus 238 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~--------~----p~~r~~~~~~~~--~g~ 299 (457)
..-.+++.. +..+++.|+.+ ..+.+||..+.. ...+.. . .........+.+ +++
T Consensus 187 --~~v~~~~~~~~~~~ll~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 258 (408)
T 4a11_B 187 --QEILAVSWSPRYDYILATASAD------SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL 258 (408)
T ss_dssp --SCEEEEEECSSCTTEEEEEETT------SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS
T ss_pred --CcEEEEEECCCCCcEEEEEcCC------CcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCC
Confidence 111122222 33367777644 357888887653 222210 0 111111122222 565
Q ss_pred EEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCcEE
Q 012755 300 FYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQATNVVKKYNKTNNSWT 379 (457)
Q Consensus 300 iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~~W~ 379 (457)
..+.|+.+ ..+.+||..+..-.......... ..............+..+++++..+.+..||..+.+-.
T Consensus 259 ~l~~~~~d------g~i~vwd~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 327 (408)
T 4a11_B 259 HLLTVGTD------NRMRLWNSSNGENTLVNYGKVCN-----NSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQI 327 (408)
T ss_dssp EEEEEETT------SCEEEEETTTCCBCCCCCCCCCC-----CCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEE
T ss_pred EEEEecCC------CeEEEEECCCCccceeccccccc-----cccccceeEEecCCCceEEEEecCCEEEEEECcCCcce
Confidence 66666543 35788998876532221110000 00011111111112333444445678999998876532
Q ss_pred EeccCCCccCCCCcceEEE-EEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 380 VVKRLPVRANSFNGWGLAF-KACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 380 ~v~~~p~~~~~~~~~~~~~-~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
. .+.... ..-..+ ..-++++++.|+.++ .+.+||+++.
T Consensus 328 ~--~~~~~~----~~v~~~~~s~~~~~l~s~~~dg------~i~iw~~~~~ 366 (408)
T 4a11_B 328 T--MLKGHY----KTVDCCVFQSNFQELYSGSRDC------NILAWVPSLY 366 (408)
T ss_dssp E--EECCCS----SCEEEEEEETTTTEEEEEETTS------CEEEEEECC-
T ss_pred e--eeccCC----CeEEEEEEcCCCCEEEEECCCC------eEEEEeCCCC
Confidence 2 222111 111112 233667777787764 4777888763
No 195
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=93.26 E-value=5.8 Score=38.25 Aligned_cols=173 Identities=12% Similarity=0.037 Sum_probs=94.6
Q ss_pred cEEEEEECCCCcEEeCCCCCCCccceeEEe--eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCC--CCCCCcceeE
Q 012755 218 FAIWMYSLIANCWSKCPQMNLPRCLFGSSS--LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPD--MNLPRKLCSG 293 (457)
Q Consensus 218 ~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~--~p~~r~~~~~ 293 (457)
..+..+++.......+.+- .....+++. .++.||+.-- ....++++++.....+.+.. +..+ .+.
T Consensus 96 ~~I~~i~~~~~~~~~~~~~--~~~~~gl~~d~~~~~ly~~D~------~~~~I~r~~~~g~~~~~~~~~~~~~p---~gl 164 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDV------TLDRILRANLNGSNVEEVVSTGLESP---GGL 164 (386)
T ss_dssp SCEEEECTTSCCCEEEECS--CSCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCCEEEEECSSCSCC---CCE
T ss_pred ccceeeccCCCcEEEEecC--CCccEEEEEecCCCeEEEEeC------CCCcEEEEecCCCCcEEEEeCCCCCc---cEE
Confidence 3577777776665544221 111233333 3688998832 23578999998877655422 2222 233
Q ss_pred EEE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCC-CeE
Q 012755 294 FFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQAT-NVV 368 (457)
Q Consensus 294 ~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~-~~v 368 (457)
++- ++.||+... ....++++++....-..+.... .....++++- ++.||+..... ..|
T Consensus 165 avd~~~g~lY~~d~------~~~~I~~~~~dg~~~~~l~~~~-----------l~~P~giavdp~~g~ly~td~~~~~~I 227 (386)
T 3v65_B 165 AVDWVHDKLYWTDS------GTSRIEVANLDGAHRKVLLWQS-----------LEKPRAIALHPMEGTIYWTDWGNTPRI 227 (386)
T ss_dssp EEETTTTEEEEEET------TTTEEEECBTTSCSCEEEECSS-----------CSCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred EEEeCCCeEEEEcC------CCCeEEEEeCCCCceEEeecCC-----------CCCCcEEEEEcCCCeEEEeccCCCCEE
Confidence 433 789999843 2346888888765433332111 1112234444 68999987554 789
Q ss_pred EEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 369 KKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 369 ~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
++++++...=+.+..-. ... -.|+++...+++||+.-... ..|+.++.+.
T Consensus 228 ~r~~~dG~~~~~~~~~~--~~~--PnGlavd~~~~~lY~aD~~~------~~I~~~d~dG 277 (386)
T 3v65_B 228 EASSMDGSGRRIIADTH--LFW--PNGLTIDYAGRRMYWVDAKH------HVIERANLDG 277 (386)
T ss_dssp EEEETTSCSCEEEECSS--CSC--EEEEEEEGGGTEEEEEETTT------TEEEEECTTS
T ss_pred EEEeCCCCCcEEEEECC--CCC--eeeEEEeCCCCEEEEEECCC------CEEEEEeCCC
Confidence 99999865433332111 100 11333323578899875322 1466666643
No 196
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=93.19 E-value=4.1 Score=35.72 Aligned_cols=151 Identities=12% Similarity=0.072 Sum_probs=78.6
Q ss_pred eEEeCCEEEEEceecCCcEEEEEECCCCcEE--eC----CCCCCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeC
Q 012755 201 SLAVGTQLLVFGRELSGFAIWMYSLIANCWS--KC----PQMNLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNS 273 (457)
Q Consensus 201 ~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~--~l----~~lp~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~ 273 (457)
++...+.+|+|-|. .+|+++.....+. .+ +.+|.. ...+... .++++|+|-| ...++|+.
T Consensus 29 i~~~~g~~y~Fkg~----~~wr~~~~~~~~~p~~I~~~wp~Lp~~-iDAa~~~~~~~~iyfFkG--------~~~w~~~~ 95 (207)
T 1pex_A 29 ITSLRGETMIFKDR----FFWRLHPQQVDAELFLTKSFWPELPNR-IDAAYEHPSHDLIFIFRG--------RKFWALNG 95 (207)
T ss_dssp EEEETTEEEEEETT----EEEEECSSSSCCEEEEHHHHCTTSCSS-CCEEEEETTTTEEEEEET--------TEEEEEST
T ss_pred EEeCCCcEEEEECC----EEEEEeCCCcCCCceehhHhccCCCCC-ccEEEEeccCCcEEEEcc--------CEEEEEeC
Confidence 45578999998653 5677776543321 11 334422 2222212 2689999966 35677764
Q ss_pred CCCcE---EECCC--CCCCCcceeEEEE---CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCC
Q 012755 274 ELGTW---ETLPD--MNLPRKLCSGFFM---DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAM 345 (457)
Q Consensus 274 ~t~~W---~~~~~--~p~~r~~~~~~~~---~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~ 345 (457)
.+-.- +.+.. +|..-....+|+. +|++|++-| +..++||..+++ +..-.+-+......-.+
T Consensus 96 ~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG--------~~ywr~d~~~~~---~d~gyPr~i~~~~~Gip 164 (207)
T 1pex_A 96 YDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG--------NQVWRYDDTNHI---MDKDYPRLIEEDFPGIG 164 (207)
T ss_dssp TCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET--------TEEEEEETTTTE---ECSSCCCBHHHHSTTSC
T ss_pred CeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC--------CEEEEEeCcCcc---ccCCCCccHHHcCCCCC
Confidence 32111 22322 2221112334433 489999965 356889987643 21100000000000001
Q ss_pred CCCCEEEEECCEEEEEecCCCeEEEEECCCCc
Q 012755 346 SSPPLVAVVNNQLYSADQATNVVKKYNKTNNS 377 (457)
Q Consensus 346 r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~~ 377 (457)
....++...+|++|.+-| +..|+||..+++
T Consensus 165 ~~iDaAf~~~g~~YfFkg--~~y~rf~~~~~~ 194 (207)
T 1pex_A 165 DKVDAVYEKNGYIYFFNG--PIQFEYSIWSNR 194 (207)
T ss_dssp SCCSEEEEETTEEEEEET--TEEEEEETTTTE
T ss_pred CCccEEEEcCCcEEEEEC--CEEEEEeCCccE
Confidence 223445567999999965 689999998765
No 197
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=93.09 E-value=5 Score=36.46 Aligned_cols=224 Identities=9% Similarity=-0.059 Sum_probs=113.7
Q ss_pred EEEEe-cCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeE-EeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCC--
Q 012755 163 VYLAC-ILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESL-AVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNL-- 238 (457)
Q Consensus 163 l~~~~-~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~-~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~-- 238 (457)
+|+.. ....++.||+.+. ...+.. +.... ..++ ..++.+|+... ....+.+||+.+++.+.+.....
T Consensus 42 l~~~~~~~~~i~~~~~~~~-~~~~~~-~~~~~-----~~l~~~~dg~l~v~~~--~~~~i~~~d~~~g~~~~~~~~~~~~ 112 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ-LSPEMH-PSHHQ-----NGHCLNKQGHLIACSH--GLRRLERQREPGGEWESIADSFEGK 112 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC-EEEEES-SCSSE-----EEEEECTTCCEEEEET--TTTEEEEECSTTCCEEEEECEETTE
T ss_pred EEEEeCCCCEEEEEECCCC-eEEEEC-CCCCc-----ceeeECCCCcEEEEec--CCCeEEEEcCCCCcEEEEeeccCCC
Confidence 55544 3567889999877 544432 11110 1122 23677777542 23579999998888776532111
Q ss_pred --CccceeEEeeCCEEEEE----eeecC-------CCCccceEEEEeCCCCcEEECCCCCCCCcceeEEE-ECCEEEEEe
Q 012755 239 --PRCLFGSSSLGEVAIVA----GGTDK-------NGCILKSAELYNSELGTWETLPDMNLPRKLCSGFF-MDGKFYIIG 304 (457)
Q Consensus 239 --~r~~~~~~~~~~~iyv~----GG~~~-------~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~g~iyv~G 304 (457)
.+....+..-++.+|+. |.... .......++.||+. ++...+..- .....+.+. -+|++++..
T Consensus 113 ~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~--~~~~~gi~~s~dg~~lv~~ 189 (296)
T 3e5z_A 113 KLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRD--RVKPNGLAFLPSGNLLVSD 189 (296)
T ss_dssp ECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECC--CSSEEEEEECTTSCEEEEE
T ss_pred CCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecC--CCCCccEEECCCCCEEEEe
Confidence 11111222236788886 33110 00113478999987 555443211 111122222 256666443
Q ss_pred ccCCCCCCCceEEEEECC-CCce-EEcCCCCCCCCCCCCCCCCCCCCEEEE-ECCEEEEEecCCCeEEEEECCCCcEEEe
Q 012755 305 GMSSPTDPLTCGEEYNLE-TRTW-KRIENMYPSNVGTQSNPAMSSPPLVAV-VNNQLYSADQATNVVKKYNKTNNSWTVV 381 (457)
Q Consensus 305 G~~~~~~~~~~~~~yd~~-t~~W-~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~g~ly~~gg~~~~v~~Yd~~~~~W~~v 381 (457)
. ....+++||+. +++. ........ . .....+++. -+|+||+.. .+.|.+||++...-..+
T Consensus 190 ~------~~~~i~~~~~~~~g~~~~~~~~~~~-~--------~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~g~~~~~~ 252 (296)
T 3e5z_A 190 T------GDNATHRYCLNARGETEYQGVHFTV-E--------PGKTDGLRVDAGGLIWASA--GDGVHVLTPDGDELGRV 252 (296)
T ss_dssp T------TTTEEEEEEECSSSCEEEEEEEECC-S--------SSCCCSEEEBTTSCEEEEE--TTEEEEECTTSCEEEEE
T ss_pred C------CCCeEEEEEECCCCcCcCCCeEeeC-C--------CCCCCeEEECCCCCEEEEc--CCeEEEECCCCCEEEEE
Confidence 2 23578889986 5555 21111100 0 111112333 378898887 57899999986655554
Q ss_pred ccCCCccCCCCcceEEEEEeC-CEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 382 KRLPVRANSFNGWGLAFKACG-NSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 382 ~~~p~~~~~~~~~~~~~~~~~-g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
. .+.... .++...-+ +.||+... . .++.++++++
T Consensus 253 ~-~~~~~~-----~~~f~~~d~~~L~v~t~-~-------~l~~~~~~~~ 287 (296)
T 3e5z_A 253 L-TPQTTS-----NLCFGGPEGRTLYMTVS-T-------EFWSIETNVR 287 (296)
T ss_dssp E-CSSCCC-----EEEEESTTSCEEEEEET-T-------EEEEEECSCC
T ss_pred E-CCCCce-----eEEEECCCCCEEEEEcC-C-------eEEEEEcccc
Confidence 3 222211 12221123 36777653 2 4888899874
No 198
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=92.98 E-value=5.4 Score=36.57 Aligned_cols=146 Identities=14% Similarity=0.067 Sum_probs=72.4
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDM 284 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~ 284 (457)
++.+++.|+.. ..+..++.......................-.+..++.|+.+ ..+.++|.....-......
T Consensus 97 dg~~l~s~~~d--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d------~~~~~~d~~~~~~~~~~~~ 168 (340)
T 4aow_A 97 DGQFALSGSWD--GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD------KTIKLWNTLGVCKYTVQDE 168 (340)
T ss_dssp TSSEEEEEETT--SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT------SCEEEECTTSCEEEEECSS
T ss_pred CCCEEEEEccc--ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCC------CeEEEEEeCCCceEEEEec
Confidence 55566666543 357777877665544322222211112222244555666543 3466677765443222211
Q ss_pred CCCCcceeEEEE----CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEE
Q 012755 285 NLPRKLCSGFFM----DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQL 358 (457)
Q Consensus 285 p~~r~~~~~~~~----~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~l 358 (457)
.. ......+.+ .+.+++.++.+ ..+..||..+.+-...-. . .......+.+ ++++
T Consensus 169 ~~-~~~v~~~~~~~~~~~~~~~s~~~d------~~i~i~d~~~~~~~~~~~--~----------h~~~v~~~~~s~~~~~ 229 (340)
T 4aow_A 169 SH-SEWVSCVRFSPNSSNPIIVSCGWD------KLVKVWNLANCKLKTNHI--G----------HTGYLNTVTVSPDGSL 229 (340)
T ss_dssp SC-SSCEEEEEECSCSSSCEEEEEETT------SCEEEEETTTTEEEEEEC--C----------CSSCEEEEEECTTSSE
T ss_pred cc-cCcccceEEccCCCCcEEEEEcCC------CEEEEEECCCCceeeEec--C----------CCCcEEEEEECCCCCE
Confidence 11 111112221 23345555432 347789988765433221 1 1111122223 6778
Q ss_pred EEEecCCCeEEEEECCCCc
Q 012755 359 YSADQATNVVKKYNKTNNS 377 (457)
Q Consensus 359 y~~gg~~~~v~~Yd~~~~~ 377 (457)
++.|+..+.+..||..+..
T Consensus 230 l~s~s~Dg~i~iwd~~~~~ 248 (340)
T 4aow_A 230 CASGGKDGQAMLWDLNEGK 248 (340)
T ss_dssp EEEEETTCEEEEEETTTTE
T ss_pred EEEEeCCCeEEEEEeccCc
Confidence 8888888899999998764
No 199
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=92.96 E-value=6.6 Score=37.47 Aligned_cols=153 Identities=11% Similarity=0.016 Sum_probs=78.3
Q ss_pred CCEEEEEeeecCCCCccceEEEEeCCCCcEEE-----CCCCCCCCcceeEEEE--CC-EEEEEeccCCCCCCCceEEEEE
Q 012755 249 GEVAIVAGGTDKNGCILKSAELYNSELGTWET-----LPDMNLPRKLCSGFFM--DG-KFYIIGGMSSPTDPLTCGEEYN 320 (457)
Q Consensus 249 ~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~-----~~~~p~~r~~~~~~~~--~g-~iyv~GG~~~~~~~~~~~~~yd 320 (457)
++.+++.|+.+ ..+.+||..++.... +..+.........+.+ ++ .+++.|+.+ ..+.+||
T Consensus 93 ~~~~l~s~s~d------g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d------g~i~iwd 160 (402)
T 2aq5_A 93 NDNVIASGSED------CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD------NVILVWD 160 (402)
T ss_dssp CTTEEEEEETT------SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT------SCEEEEE
T ss_pred CCCEEEEEeCC------CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC------CEEEEEE
Confidence 56777777643 468888988774321 1111111111122222 33 466666543 3578899
Q ss_pred CCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEE
Q 012755 321 LETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAF 398 (457)
Q Consensus 321 ~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~ 398 (457)
..+++....-.... .......+.. ++.+++.++..+.+..||+.+.+-...-....... ......
T Consensus 161 ~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~ 227 (402)
T 2aq5_A 161 VGTGAAVLTLGPDV----------HPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGT---RPVHAV 227 (402)
T ss_dssp TTTTEEEEEECTTT----------CCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSS---SCCEEE
T ss_pred CCCCCccEEEecCC----------CCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCC---cceEEE
Confidence 98876543221011 1111222333 67777788788899999998875433210111110 011122
Q ss_pred EEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 399 KACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 399 ~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
..-++++++.|..... ...+.+||....
T Consensus 228 ~~~~~~~l~~g~~~~~---d~~i~iwd~~~~ 255 (402)
T 2aq5_A 228 FVSEGKILTTGFSRMS---ERQVALWDTKHL 255 (402)
T ss_dssp ECSTTEEEEEEECTTC---CEEEEEEETTBC
T ss_pred EcCCCcEEEEeccCCC---CceEEEEcCccc
Confidence 3347788877721111 136888888763
No 200
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=92.93 E-value=5.1 Score=36.16 Aligned_cols=222 Identities=11% Similarity=0.064 Sum_probs=98.5
Q ss_pred cEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCc-EEeCCCCCCC
Q 012755 161 HWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANC-WSKCPQMNLP 239 (457)
Q Consensus 161 ~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~-W~~l~~lp~~ 239 (457)
..++..+....+..||..+..-.......... ........++.+++.|+... .+.+|+..... ...+..+...
T Consensus 30 ~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~~dg--~i~~~~~~~~~~~~~~~~~~~~ 103 (313)
T 3odt_A 30 SKVASVSRDGTVRLWSKDDQWLGTVVYTGQGF----LNSVCYDSEKELLLFGGKDT--MINGVPLFATSGEDPLYTLIGH 103 (313)
T ss_dssp TEEEEEETTSEEEEEEESSSEEEEEEEECSSC----EEEEEEETTTTEEEEEETTS--CEEEEETTCCTTSCC-CEECCC
T ss_pred CEEEEEEcCCcEEEEECCCCEEEEEeecCCcc----EEEEEECCCCCEEEEecCCC--eEEEEEeeecCCCCcccchhhc
Confidence 34444444566778887665432211111000 00111223566666665433 46666665421 1111111111
Q ss_pred ccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEE-EE-CCEEEEEeccCCCCCCCceEE
Q 012755 240 RCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGF-FM-DGKFYIIGGMSSPTDPLTCGE 317 (457)
Q Consensus 240 r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~-~~-~g~iyv~GG~~~~~~~~~~~~ 317 (457)
.........++..++.|+.+ ..+.+||........... ......+. .- ++..++.|+.+ ..+.
T Consensus 104 ~~~i~~~~~~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~---~~~v~~~~~~~~~~~~l~~~~~d------~~i~ 168 (313)
T 3odt_A 104 QGNVCSLSFQDGVVISGSWD------KTAKVWKEGSLVYNLQAH---NASVWDAKVVSFSENKFLTASAD------KTIK 168 (313)
T ss_dssp SSCEEEEEEETTEEEEEETT------SEEEEEETTEEEEEEECC---SSCEEEEEEEETTTTEEEEEETT------SCEE
T ss_pred ccCEEEEEecCCEEEEEeCC------CCEEEEcCCcEEEecccC---CCceeEEEEccCCCCEEEEEECC------CCEE
Confidence 11112223355566666643 457778833222222111 11111222 22 56666666543 3467
Q ss_pred EEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEE-EECCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceE
Q 012755 318 EYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVA-VVNNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGL 396 (457)
Q Consensus 318 ~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~ 396 (457)
.||..+.. ..+..... .....++ .-++. ++.++..+.+..||..+.+-.. .+.... ..-.
T Consensus 169 i~d~~~~~-~~~~~~~~-----------~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~--~~~~~~----~~i~ 229 (313)
T 3odt_A 169 LWQNDKVI-KTFSGIHN-----------DVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLR--TYEGHE----SFVY 229 (313)
T ss_dssp EEETTEEE-EEECSSCS-----------SCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEE--EEECCS----SCEE
T ss_pred EEecCceE-EEEeccCc-----------ccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhh--hhhcCC----ceEE
Confidence 78833222 12221111 1111222 34677 6677788899999998764322 111111 1112
Q ss_pred EEEEe-CCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 397 AFKAC-GNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 397 ~~~~~-~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
.+... +++ ++.|+.++ .+.+||..+.
T Consensus 230 ~~~~~~~~~-l~~~~~dg------~v~iwd~~~~ 256 (313)
T 3odt_A 230 CIKLLPNGD-IVSCGEDR------TVRIWSKENG 256 (313)
T ss_dssp EEEECTTSC-EEEEETTS------EEEEECTTTC
T ss_pred EEEEecCCC-EEEEecCC------EEEEEECCCC
Confidence 22222 454 55555543 5888888774
No 201
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=92.87 E-value=1.7 Score=45.80 Aligned_cols=214 Identities=10% Similarity=0.023 Sum_probs=109.3
Q ss_pred CccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEE--eCCEEEEEceecCCcEEEEEECCC----CcEEeC-C-CCCCCc
Q 012755 169 LMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLA--VGTQLLVFGRELSGFAIWMYSLIA----NCWSKC-P-QMNLPR 240 (457)
Q Consensus 169 ~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~--~~~~lyv~GG~~~~~~v~~yd~~t----~~W~~l-~-~lp~~r 240 (457)
...+..+|........+..... .... ++. .++.||+.-. ....++++++.+ ..-..+ . .+..|
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~--~p~g----la~d~~~~~Ly~sD~--~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P- 455 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLR--NVVA----LDTEVASNRIYWSDL--SQRMICSTQLDRAHGVSSYDTVISRDIQAP- 455 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCT--TCCC----CEEETTTTEEEECCT--TTTSBEEEESCCCCC-CCCCCBCCSCC--C-
T ss_pred ccceEEEeCCCCcceeeeccCc--ceEE----EccccccCeEEEEec--CCCeEEEEecCCCCCCcceEEEEeCCCCCc-
Confidence 4566677777766654432211 1111 222 2678888642 234688888875 111111 1 12122
Q ss_pred cceeEEe--eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCC--CCCCCcceeEEE--ECCEEEEEeccCCCCCCCc
Q 012755 241 CLFGSSS--LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPD--MNLPRKLCSGFF--MDGKFYIIGGMSSPTDPLT 314 (457)
Q Consensus 241 ~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~--~p~~r~~~~~~~--~~g~iyv~GG~~~~~~~~~ 314 (457)
.++++ .++.||+.-. ....+.++|+....-+.+.. +..|+ .+++ .++.||+..-. ...
T Consensus 456 --~glavD~~~g~LY~tD~------~~~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td~~-----~~~ 519 (699)
T 1n7d_A 456 --DGLAVDWIHSNIYWTDS------VLGTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDWG-----TPA 519 (699)
T ss_dssp --CCEECCCSSSBCEECCT------TTSCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECCCS-----SSC
T ss_pred --ceEEEEeeCCcEEEEec------cCCeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEcccC-----CCC
Confidence 23333 4788998632 23578899988765544422 22232 2333 26788886311 124
Q ss_pred eEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCC
Q 012755 315 CGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFN 392 (457)
Q Consensus 315 ~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~ 392 (457)
.++++++....-+.+.... .....++++- +++||+.....+.|+++|+....-+.+...+.....
T Consensus 520 ~I~~~~~dG~~~~~l~~~~-----------l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~-- 586 (699)
T 1n7d_A 520 KIKKGGLNGVDIYSLVTEN-----------IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAH-- 586 (699)
T ss_dssp CEEBCCSSSCCCCEESCSS-----------CSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSS--
T ss_pred eEEEEeCCCCCeeEEEeCC-----------CCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCC--
Confidence 6777776544333221110 1111234432 589999998888999999976544444322111111
Q ss_pred cceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 393 GWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 393 ~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
- .+++..++.||+.-... ..|.++++.+
T Consensus 587 P--~glavd~~~lywtd~~~------~~V~~~d~~~ 614 (699)
T 1n7d_A 587 P--FSLAVFEDKVFWTDIIN------EAIFSANRLT 614 (699)
T ss_dssp C--CCCEEETTEEEEECSTT------TCEEEEETTT
T ss_pred c--eEeEEECCEEEEEeCCC------CeEEEEEccC
Confidence 1 22445678999876322 1466677654
No 202
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=92.80 E-value=0.017 Score=59.66 Aligned_cols=36 Identities=6% Similarity=0.203 Sum_probs=29.1
Q ss_pred CCCCCCcHHHHhhhceecc-ccccCcccccChhhhhh
Q 012755 108 SFLPGLHDDATLDILAWSS-RSDYPTLSCLNRKFKSL 143 (457)
Q Consensus 108 ~~~~~LPddl~~~iLarlp-~~~~~~l~~v~k~w~~l 143 (457)
..|..||||++..|+++|| .++..+++.|||+|+.+
T Consensus 4 d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 4 RIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred cchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 4578999999999999999 88999999999999988
No 203
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=92.30 E-value=0.7 Score=45.29 Aligned_cols=145 Identities=9% Similarity=0.056 Sum_probs=75.1
Q ss_pred CEEEEEceecCCcEEEEEECCCCcEEeCCCC-CCCccceeEEe--eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECC
Q 012755 206 TQLLVFGRELSGFAIWMYSLIANCWSKCPQM-NLPRCLFGSSS--LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLP 282 (457)
Q Consensus 206 ~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~l-p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~ 282 (457)
+.+++.|+.+. .+.+||..+++-..+-.+ .....-.+++. .++.+++.|+.+ ..+.++|.+++.-..+.
T Consensus 132 ~~~lasGs~dg--~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D------~~v~iwd~~~~~~~~~~ 203 (435)
T 4e54_B 132 PSTVAVGSKGG--DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME------GTTRLQDFKGNILRVFA 203 (435)
T ss_dssp TTCEEEEETTS--CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS------SCEEEEETTSCEEEEEE
T ss_pred CCEEEEEeCCC--EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC------CEEEEeeccCCceeEEe
Confidence 34555565433 577888876653322111 11112223333 255666666654 35778899887765543
Q ss_pred CCCCCC-cceeEEE-ECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--C-CE
Q 012755 283 DMNLPR-KLCSGFF-MDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--N-NQ 357 (457)
Q Consensus 283 ~~p~~r-~~~~~~~-~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~-g~ 357 (457)
...... ...++.. -++++.+.|+.+ ..+..||..+.. +..+.. .......+.+ + ..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~l~~g~~d------g~i~~wd~~~~~---~~~~~~----------h~~~v~~v~~~p~~~~ 264 (435)
T 4e54_B 204 SSDTINIWFCSLDVSASSRMVVTGDNV------GNVILLNMDGKE---LWNLRM----------HKKKVTHVALNPCCDW 264 (435)
T ss_dssp CCSSCSCCCCCEEEETTTTEEEEECSS------SBEEEEESSSCB---CCCSBC----------CSSCEEEEEECTTCSS
T ss_pred ccCCCCccEEEEEECCCCCEEEEEeCC------CcEeeeccCcce---eEEEec----------ccceEEeeeecCCCce
Confidence 222111 1122232 366777777643 357888886543 222211 1122223333 3 34
Q ss_pred EEEEecCCCeEEEEECCCCc
Q 012755 358 LYSADQATNVVKKYNKTNNS 377 (457)
Q Consensus 358 ly~~gg~~~~v~~Yd~~~~~ 377 (457)
+++.|+..+.|..||..+..
T Consensus 265 ~~~s~s~d~~v~iwd~~~~~ 284 (435)
T 4e54_B 265 FLATASVDQTVKIWDLRQVR 284 (435)
T ss_dssp EEEEEETTSBCCEEETTTCC
T ss_pred EEEEecCcceeeEEeccccc
Confidence 67777777889999987643
No 204
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=92.25 E-value=6.7 Score=38.92 Aligned_cols=183 Identities=18% Similarity=0.281 Sum_probs=96.7
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEe--CCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCc-----
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSK--CPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGT----- 277 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~--l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~----- 277 (457)
++.+|+|-|. ..|.||..+++... .+.+|. . -++....+++|+|-| ...+.||+.+++
T Consensus 158 ~~~~yfFkG~----~yw~yd~~~~~~~~~~w~gi~~--i-DAA~~~~g~~YfFkG--------~~y~rfd~~~~~v~~gy 222 (460)
T 1qhu_A 158 DEGILFFQGN----RKWFWDLTTGTKKERSWPAVGN--C-TSALRWLGRYYCFQG--------NQFLRFNPVSGEVPPGY 222 (460)
T ss_dssp SSEEEEEETT----EEEEEETTTTEEEEECCTTSCC--C-SEEEEETTEEEEEET--------TEEEEECTTTCCCCTTC
T ss_pred CCeEEEEecc----cEEEEecccceeecccCCCCCc--c-chheeeCCceEEEEC--------CEEEEEcCccCcccCCC
Confidence 6788888763 68999998876543 233332 2 233344789999976 456778776543
Q ss_pred -------EEECCCCC------------------CCCcceeEEE--ECCEEEEEeccCCCCCCCceEEEEECCCCceE--E
Q 012755 278 -------WETLPDMN------------------LPRKLCSGFF--MDGKFYIIGGMSSPTDPLTCGEEYNLETRTWK--R 328 (457)
Q Consensus 278 -------W~~~~~~p------------------~~r~~~~~~~--~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~--~ 328 (457)
|..++... .+.....++. .+|++|.+-|. ..+++|...+.+. .
T Consensus 223 Pk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg~--------~yWR~~~~~~~~~p~~ 294 (460)
T 1qhu_A 223 PLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSGS--------HYWRLDTNRDGWHSWP 294 (460)
T ss_dssp CEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEETT--------EEEECTTGGGCCCCEE
T ss_pred CcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeCC--------EEEEEecCCCCcCccc
Confidence 22222110 0111223333 36899998652 3455665443321 1
Q ss_pred cCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCcEEEeccCCCc--------cCC-CCcceEEEE
Q 012755 329 IENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQATNVVKKYNKTNNSWTVVKRLPVR--------ANS-FNGWGLAFK 399 (457)
Q Consensus 329 ~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~--------~~~-~~~~~~~~~ 399 (457)
+....+ -.+...-++...++++|++-| +.+|+|+..++ .+.+..-|.. ... ...--+|+.
T Consensus 295 Is~~Wp--------glP~~IDAAf~~~~~~yfFkG--~~yw~f~~~~g-~~~~~GyPK~I~~~lGlp~~~~~~~IDAA~~ 363 (460)
T 1qhu_A 295 IAHQWP--------QGPSTVDAAFSWEDKLYLIQD--TKVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAVDAAFV 363 (460)
T ss_dssp GGGTCT--------TSCSSCSEEEEETTEEEEEET--TEEEEEECSBS-CEECTTCCEEHHHHHCCCSSCCCSCCCEEEC
T ss_pred hhhhcc--------CCCCCCcEEEEECCeEEEEeC--CEEEEEeCCCC-ceecCCCCeEHHHhccCCCccccCcccEEEE
Confidence 211111 002223445566899999965 67999987542 3333221211 110 001123332
Q ss_pred E-eCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 400 A-CGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 400 ~-~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
. ..+++|+|-|. ..+.||....
T Consensus 364 ~~~~~ktyfFkG~--------~ywryd~~~~ 386 (460)
T 1qhu_A 364 CPGSSRLHIMAGR--------RLWWLDLKSG 386 (460)
T ss_dssp CTTCCEEEEEETT--------EEEEEEGGGG
T ss_pred eCCCCEEEEEECC--------EEEEEECCCC
Confidence 1 36899999875 3777887653
No 205
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=92.25 E-value=9.8 Score=37.72 Aligned_cols=220 Identities=15% Similarity=0.161 Sum_probs=111.1
Q ss_pred cEEEEEecCccEEEEeCCCCcEEe--CCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCc---------
Q 012755 161 HWVYLACILMPWEAFDPLRQRWMR--LPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANC--------- 229 (457)
Q Consensus 161 ~~l~~~~~~~~~~~ydp~~~~W~~--l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~--------- 229 (457)
+.+|++. .+..|.||..+++... .+.+|. . . ++....+.+|+|-|. ..+.||+.+++
T Consensus 159 ~~~yfFk-G~~yw~yd~~~~~~~~~~w~gi~~--i--D---AA~~~~g~~YfFkG~----~y~rfd~~~~~v~~gyPk~i 226 (460)
T 1qhu_A 159 EGILFFQ-GNRKWFWDLTTGTKKERSWPAVGN--C--T---SALRWLGRYYCFQGN----QFLRFNPVSGEVPPGYPLDV 226 (460)
T ss_dssp SEEEEEE-TTEEEEEETTTTEEEEECCTTSCC--C--S---EEEEETTEEEEEETT----EEEEECTTTCCCCTTCCEEH
T ss_pred CeEEEEe-cccEEEEecccceeecccCCCCCc--c--c---hheeeCCceEEEECC----EEEEEcCccCcccCCCCcch
Confidence 3445554 3578899988765432 122332 1 1 134557899998764 67899987654
Q ss_pred ---EEeCCCCC------------------CCc-cceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEE--EC---
Q 012755 230 ---WSKCPQMN------------------LPR-CLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWE--TL--- 281 (457)
Q Consensus 230 ---W~~l~~lp------------------~~r-~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~--~~--- 281 (457)
|..++... .+. ..-++.. .++++|+|-| ...+++|.....+. .+
T Consensus 227 s~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg--------~~yWR~~~~~~~~~p~~Is~~ 298 (460)
T 1qhu_A 227 RDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSG--------SHYWRLDTNRDGWHSWPIAHQ 298 (460)
T ss_dssp HHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEET--------TEEEECTTGGGCCCCEEGGGT
T ss_pred hhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeC--------CEEEEEecCCCCcCccchhhh
Confidence 22222110 011 1122233 4789999866 34555555432211 11
Q ss_pred -CCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCC---CCCCCCCCCCCCCCEEEEE---
Q 012755 282 -PDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPS---NVGTQSNPAMSSPPLVAVV--- 354 (457)
Q Consensus 282 -~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~---~~~~~~~~~~r~~~~~~~~--- 354 (457)
+.+|.. --++...++++|.+-| +.+++|+..++ .+.++.-|.. ..|.+.. .+.....++..
T Consensus 299 WpglP~~--IDAAf~~~~~~yfFkG--------~~yw~f~~~~g-~~~~~GyPK~I~~~lGlp~~-~~~~~IDAA~~~~~ 366 (460)
T 1qhu_A 299 WPQGPST--VDAAFSWEDKLYLIQD--------TKVYVFLTKGG-YTLVNGYPKRLEKELGSPPV-ISLEAVDAAFVCPG 366 (460)
T ss_dssp CTTSCSS--CSEEEEETTEEEEEET--------TEEEEEECSBS-CEECTTCCEEHHHHHCCCSS-CCCSCCCEEECCTT
T ss_pred ccCCCCC--CcEEEEECCeEEEEeC--------CEEEEEeCCCC-ceecCCCCeEHHHhccCCCc-cccCcccEEEEeCC
Confidence 223322 2334456899999954 34677876531 2222211110 0000000 00122334433
Q ss_pred CCEEEEEecCCCeEEEEECCCC---cEEEeccCCCccCCCCcceEEEEE-----------eCCEEEEEcCcCCCCCceEE
Q 012755 355 NNQLYSADQATNVVKKYNKTNN---SWTVVKRLPVRANSFNGWGLAFKA-----------CGNSLLVIGGHRELQGEIIV 420 (457)
Q Consensus 355 ~g~ly~~gg~~~~v~~Yd~~~~---~W~~v~~~p~~~~~~~~~~~~~~~-----------~~g~lyv~GG~~~~~~~~~~ 420 (457)
++++|++-| +..|.||.... .|...+.+|.... +++.. .++.+|+|-|..
T Consensus 367 ~~ktyfFkG--~~ywryd~~~~Pr~i~~~~~gi~~~vd------Aaf~~~~~~~~~~~~~~~~~~yfF~g~~-------- 430 (460)
T 1qhu_A 367 SSRLHIMAG--RRLWWLDLKSGAQATWTELPWPHEKVD------GALCMEKPLGPNSCSTSGPNLYLIHGPN-------- 430 (460)
T ss_dssp CCEEEEEET--TEEEEEEGGGGGGCCCEEECCSCSCCS------EEEEESSCSSSCCSCSSSCEEEEEETTE--------
T ss_pred CCEEEEEEC--CEEEEEECCCCccchhhhCCCCCCCcC------EEEecccccCcccccccCCeEEEEECCE--------
Confidence 589999966 68999998743 2333333333221 33322 467899988753
Q ss_pred EEEeeCCC
Q 012755 421 LHSWDPTD 428 (457)
Q Consensus 421 v~~y~~~~ 428 (457)
.+.|+..+
T Consensus 431 y~~~~~~~ 438 (460)
T 1qhu_A 431 LYCYRHVD 438 (460)
T ss_dssp EEEESSHH
T ss_pred EEEEcChh
Confidence 66777754
No 206
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=92.20 E-value=8.4 Score=36.89 Aligned_cols=104 Identities=7% Similarity=-0.091 Sum_probs=54.3
Q ss_pred cEEEEEec--Cc---cEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEe-CCEEEEEcee-------cCCcEEEEEECCC
Q 012755 161 HWVYLACI--LM---PWEAFDPLRQRWMRLPRMQCDECFTSADKESLAV-GTQLLVFGRE-------LSGFAIWMYSLIA 227 (457)
Q Consensus 161 ~~l~~~~~--~~---~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~-~~~lyv~GG~-------~~~~~v~~yd~~t 227 (457)
.++|+... .. .+.+||+.+.+- +..+|..... +. .+.. +..+|+..-. ...+.+.+||+.+
T Consensus 33 ~~~yv~~~~~~~~~~~v~v~D~~t~~~--~~~i~~g~~p-~i---~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 33 RRSYINLPAHHSAIIQQWVLDAGSGSI--LGHVNGGFLP-NP---VAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CEEEEeCCcccCCccEEEEEECCCCeE--EEEecCCCCC-Ce---EECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 45666542 22 668899887653 3334433221 11 2333 4578876421 1245788999987
Q ss_pred CcEEe-CCCCC---------CCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcE
Q 012755 228 NCWSK-CPQMN---------LPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTW 278 (457)
Q Consensus 228 ~~W~~-l~~lp---------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W 278 (457)
.+-.. ++ ++ .|+ ......-+..+|+..-. ..+.+.++| .+++=
T Consensus 107 ~~~~~~i~-~~~~~~~~~g~~p~-~~~~spDG~~l~v~n~~-----~~~~v~viD-~t~~~ 159 (373)
T 2mad_H 107 FLPIADIE-LPDAPRFDVGPYSW-MNANTPNNADLLFFQFA-----AGPAVGLVV-QGGSS 159 (373)
T ss_pred CcEEEEEE-CCCccccccCCCcc-ceEECCCCCEEEEEecC-----CCCeEEEEE-CCCCE
Confidence 64322 21 11 122 12222236678876321 135788999 88764
No 207
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=92.17 E-value=8.1 Score=36.60 Aligned_cols=219 Identities=13% Similarity=0.058 Sum_probs=121.5
Q ss_pred ccEEEEEecCccEEEEeCCCCcEEeCCC-CCCCccccCCCeeeEE--eCCEEEEEceecCCcEEEEEECCCCcEEeCC--
Q 012755 160 EHWVYLACILMPWEAFDPLRQRWMRLPR-MQCDECFTSADKESLA--VGTQLLVFGRELSGFAIWMYSLIANCWSKCP-- 234 (457)
Q Consensus 160 ~~~l~~~~~~~~~~~ydp~~~~W~~l~~-~p~~~~~~~~~~~~~~--~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~-- 234 (457)
+++|++. ....+..+++.......+.. +..+ ..+.. .++.||+.. .....++++++....-+.+.
T Consensus 44 ~~~ll~~-~~~~I~~i~~~g~~~~~~~~~~~~~-------~~l~~d~~~~~ly~~D--~~~~~I~r~~~~g~~~~~~~~~ 113 (349)
T 3v64_C 44 EPVLLFA-NRIDIRQVLPHRSEYTLLLNNLENA-------IALDFHHRRELVFWSD--VTLDRILRANLNGSNVEEVVST 113 (349)
T ss_dssp CCEEEEE-CBSCEEEECTTSCCEEEEECSCSCE-------EEEEEETTTTEEEEEE--TTTTEEEEEETTSCSCEEEECS
T ss_pred CceeEee-cccceEEEeCCCCeeEEeecCCCce-------EEEEEeccccEEEEEe--ccCCceEEEecCCCCceEEEeC
Confidence 4555543 35668888887776655432 1111 11121 357888864 23457899999876554432
Q ss_pred CCCCCccceeEEe--eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECC--CCCCCCcceeEEEE--CCEEEEEeccCC
Q 012755 235 QMNLPRCLFGSSS--LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLP--DMNLPRKLCSGFFM--DGKFYIIGGMSS 308 (457)
Q Consensus 235 ~lp~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~--~~p~~r~~~~~~~~--~g~iyv~GG~~~ 308 (457)
.+..| .++++ .++.||+.-. ....++++++....-+.+. .+..| ..+++- ++.||+..-.
T Consensus 114 ~~~~p---~glavd~~~g~ly~~d~------~~~~I~~~~~dG~~~~~l~~~~l~~P---~~iavdp~~g~ly~td~~-- 179 (349)
T 3v64_C 114 GLESP---GGLAVDWVHDKLYWTDS------GTSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWG-- 179 (349)
T ss_dssp SCSCC---CEEEEETTTTEEEEEET------TTTEEEEEETTSCSCEEEECTTCSCE---EEEEEETTTTEEEEEECS--
T ss_pred CCCCc---cEEEEecCCCeEEEEcC------CCCeEEEEcCCCCceEEEEeCCCCCc---ceEEEecCcCeEEEeccC--
Confidence 22222 23333 4789999743 1357888988765433331 22222 233443 6899997421
Q ss_pred CCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEeccCCC
Q 012755 309 PTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSWTVVKRLPV 386 (457)
Q Consensus 309 ~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~ 386 (457)
....++++++....-+.+..- . .....++++- +++||+.....+.|+++|++...=+.+....
T Consensus 180 ---~~~~I~r~~~dG~~~~~~~~~-~----------~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~- 244 (349)
T 3v64_C 180 ---NTPRIEASSMDGSGRRIIADT-H----------LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG- 244 (349)
T ss_dssp ---SSCEEEEEETTSCSCEESCCS-S----------CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS-
T ss_pred ---CCCEEEEEeCCCCCcEEEEEC-C----------CCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCC-
Confidence 135789999876544433211 0 1112234443 7899999888889999998764333332111
Q ss_pred ccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 387 RANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 387 ~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
.. .-.+++..++.||+..-..+ .|..++..+
T Consensus 245 -~~----~P~giav~~~~ly~td~~~~------~V~~~~~~~ 275 (349)
T 3v64_C 245 -LP----HPFAITVFEDSLYWTDWHTK------SINSANKFT 275 (349)
T ss_dssp -CS----SEEEEEEETTEEEEEETTTT------EEEEEETTT
T ss_pred -CC----CceEEEEECCEEEEecCCCC------eEEEEEccC
Confidence 10 11234457899999753321 455666433
No 208
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=92.14 E-value=5.9 Score=44.34 Aligned_cols=104 Identities=9% Similarity=0.083 Sum_probs=56.3
Q ss_pred CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCC
Q 012755 297 DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQATNVVKKYNKTNN 376 (457)
Q Consensus 297 ~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~ 376 (457)
++...++|+.+ ..+..||..++.-........ .........-+|+.++.++..+.+..||..++
T Consensus 972 ~g~~l~~g~~~------g~i~i~d~~~~~~~~~~~~h~----------~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~ 1035 (1249)
T 3sfz_A 972 HLEYVAFGDED------GAIKIIELPNNRVFSSGVGHK----------KAVRHIQFTADGKTLISSSEDSVIQVWNWQTG 1035 (1249)
T ss_dssp TSSEEEEEETT------SCCEEEETTTTSCEEECCCCS----------SCCCCEEECSSSSCEEEECSSSBEEEEETTTT
T ss_pred CCCEEEEEcCC------CCEEEEEcCCCceeeecccCC----------CceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 55566666533 346788888765433221111 11111122236777777878889999999998
Q ss_pred cEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 377 SWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 377 ~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
........... -..+....+..++.|+.++ .+.+||..++
T Consensus 1036 ~~~~~~~~~~~-------v~~~~~~~~~~l~~~~~dg------~v~vwd~~~~ 1075 (1249)
T 3sfz_A 1036 DYVFLQAHQET-------VKDFRLLQDSRLLSWSFDG------TVKVWNVITG 1075 (1249)
T ss_dssp EEECCBCCSSC-------EEEEEECSSSEEEEEESSS------EEEEEETTTT
T ss_pred ceEEEecCCCc-------EEEEEEcCCCcEEEEECCC------cEEEEECCCC
Confidence 76643322111 1223233333344555543 5788888764
No 209
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=92.12 E-value=6.8 Score=35.64 Aligned_cols=197 Identities=11% Similarity=0.095 Sum_probs=93.0
Q ss_pred CCEEEEEceecCCcEEEEEECCCC--cEEeCCCCCCCc-cceeEEee---CCEEEEEeeecCCCCccceEEEEeCCCC--
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIAN--CWSKCPQMNLPR-CLFGSSSL---GEVAIVAGGTDKNGCILKSAELYNSELG-- 276 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~--~W~~l~~lp~~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~~v~~yd~~t~-- 276 (457)
++.+++.|+.. ..+.+||..++ .++.+..+.... .-.+++.. ++.+++.|+.+ ..+.+||..++
T Consensus 22 ~~~~l~~~~~d--g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d------g~v~vwd~~~~~~ 93 (351)
T 3f3f_A 22 YGRHVATCSSD--QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD------KTVKLWEEDPDQE 93 (351)
T ss_dssp SSSEEEEEETT--SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT------SCEEEEEECTTSC
T ss_pred CCCEEEEeeCC--CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC------CeEEEEecCCCcc
Confidence 45555555543 35677776643 333332221111 11222322 36677777754 35777777654
Q ss_pred -----cEEECCCCCCCCcceeEEEE--C--CEEEEEeccCCCCCCCceEEEEECCCCc----eEEcCCCCCCCCCCCCCC
Q 012755 277 -----TWETLPDMNLPRKLCSGFFM--D--GKFYIIGGMSSPTDPLTCGEEYNLETRT----WKRIENMYPSNVGTQSNP 343 (457)
Q Consensus 277 -----~W~~~~~~p~~r~~~~~~~~--~--g~iyv~GG~~~~~~~~~~~~~yd~~t~~----W~~~~~~~~~~~~~~~~~ 343 (457)
.|+.+..+.........+.+ + +.+.+.|+.+ ..+..||..+.+ |..-........ ...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~---~~~ 164 (351)
T 3f3f_A 94 ECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND------GILRLYDALEPSDLRSWTLTSEMKVLSI---PPA 164 (351)
T ss_dssp TTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT------CEEEEEECSSTTCTTCCEEEEEEESCSC---CCS
T ss_pred cccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC------CcEEEecCCChHHhcccccccccccccc---ccC
Confidence 34443322222222222222 2 5566665532 467888887654 221110000000 000
Q ss_pred CCCCCCEEEEE-----CCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEe-CC----EEEEEcCcCC
Q 012755 344 AMSSPPLVAVV-----NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKAC-GN----SLLVIGGHRE 413 (457)
Q Consensus 344 ~~r~~~~~~~~-----~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~-~g----~lyv~GG~~~ 413 (457)
........+.. ++.++++++..+.+..++........+..++.... .-..+... ++ .+++.|+.++
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~----~i~~~~~~p~~~~~~~~l~s~~~dg 240 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKS----LIRSISWAPSIGRWYQLIATGCKDG 240 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCS----CEEEEEECCCSSCSSEEEEEEETTS
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCc----ceeEEEECCCCCCcceEEEEEcCCC
Confidence 01111222222 36777777777777777777777766655443221 11122222 33 7888887764
Q ss_pred CCCceEEEEEeeCCC
Q 012755 414 LQGEIIVLHSWDPTD 428 (457)
Q Consensus 414 ~~~~~~~v~~y~~~~ 428 (457)
.+.+||...
T Consensus 241 ------~i~iwd~~~ 249 (351)
T 3f3f_A 241 ------RIRIFKITE 249 (351)
T ss_dssp ------CEEEEEEEE
T ss_pred ------eEEEEeCCC
Confidence 366666654
No 210
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=92.09 E-value=6.7 Score=41.01 Aligned_cols=71 Identities=11% Similarity=-0.045 Sum_probs=40.2
Q ss_pred EEeCCEEEEEceecCCcEEEEEECCCC---cEEeCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcE
Q 012755 202 LAVGTQLLVFGRELSGFAIWMYSLIAN---CWSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTW 278 (457)
Q Consensus 202 ~~~~~~lyv~GG~~~~~~v~~yd~~t~---~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W 278 (457)
...+++.++++.. ..++++|..++ .-+.+...... .....-.-+++.++++. ...++++|..+++.
T Consensus 116 ~SpDg~~l~~~~~---~~i~~~d~~~~~~~~~~~l~~~~~~-~~~~~~SPDG~~la~~~-------~~~i~~~d~~~g~~ 184 (741)
T 2ecf_A 116 WSPDAQRLLFPLG---GELYLYDLKQEGKAAVRQLTHGEGF-ATDAKLSPKGGFVSFIR-------GRNLWVIDLASGRQ 184 (741)
T ss_dssp ECTTSSEEEEEET---TEEEEEESSSCSTTSCCBCCCSSSC-EEEEEECTTSSEEEEEE-------TTEEEEEETTTTEE
T ss_pred ECCCCCEEEEEeC---CcEEEEECCCCCcceEEEcccCCcc-cccccCCCCCCEEEEEe-------CCcEEEEecCCCCE
Confidence 3446655555443 68999999887 55444332111 11111122555444443 13799999999888
Q ss_pred EECCC
Q 012755 279 ETLPD 283 (457)
Q Consensus 279 ~~~~~ 283 (457)
..+..
T Consensus 185 ~~~~~ 189 (741)
T 2ecf_A 185 MQLTA 189 (741)
T ss_dssp EECCC
T ss_pred EEecc
Confidence 77643
No 211
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=91.98 E-value=7.3 Score=35.70 Aligned_cols=198 Identities=9% Similarity=0.081 Sum_probs=100.6
Q ss_pred ccEEEEEecCccEEEEeCC-CCcEEeCCCCCCCccccCCCeeeEEe-CCEEEEEceecCCcEEEEEECCCC-cEEeCCCC
Q 012755 160 EHWVYLACILMPWEAFDPL-RQRWMRLPRMQCDECFTSADKESLAV-GTQLLVFGRELSGFAIWMYSLIAN-CWSKCPQM 236 (457)
Q Consensus 160 ~~~l~~~~~~~~~~~ydp~-~~~W~~l~~~p~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~v~~yd~~t~-~W~~l~~l 236 (457)
++.+|+......+++||+. ...|..-...+. ... .+.. ++.||+.. ....++.||+... .|+.-.+
T Consensus 107 ~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~----~~~---~~~~~~g~l~vgt---~~~~l~~~d~~g~~~~~~~~~- 175 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTDGTEKWRFKTKKAI----YAT---PIVSEDGTIYVGS---NDNYLYAINPDGTEKWRFKTN- 175 (330)
T ss_dssp TTEEEEECTTSEEEEECTTSCEEEEEECSSCC----CSC---CEECTTSCEEEEC---TTSEEEEECTTSCEEEEEECS-
T ss_pred CCEEEEEecCCEEEEEcCCCCEEEEEcCCCce----eee---eEEcCCCEEEEEc---CCCEEEEECCCCCEeEEEecC-
Confidence 6677776656778999987 335654322111 111 2333 66777643 1246899998822 3654321
Q ss_pred CCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCC-CcEEECCCCCCCCcceeEEEE-CCEEEEEeccCCCCCCC
Q 012755 237 NLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSEL-GTWETLPDMNLPRKLCSGFFM-DGKFYIIGGMSSPTDPL 313 (457)
Q Consensus 237 p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t-~~W~~~~~~p~~r~~~~~~~~-~g~iyv~GG~~~~~~~~ 313 (457)
... ..+.+. -++.||+.. ..+..||... ..|+....... ..+.+.. +|.||+... .
T Consensus 176 -~~~-~~~~~~d~~g~l~v~t---------~~l~~~d~~g~~~~~~~~~~~~---~~~~~~~~~g~l~v~t~-------~ 234 (330)
T 3hxj_A 176 -DAI-TSAASIGKDGTIYFGS---------DKVYAINPDGTEKWNFYAGYWT---VTRPAISEDGTIYVTSL-------D 234 (330)
T ss_dssp -SCC-CSCCEECTTCCEEEES---------SSEEEECTTSCEEEEECCSSCC---CSCCEECTTSCEEEEET-------T
T ss_pred -CCc-eeeeEEcCCCEEEEEe---------CEEEEECCCCcEEEEEccCCcc---eeceEECCCCeEEEEcC-------C
Confidence 111 112223 367787753 3578888432 23776532211 1122222 567887531 2
Q ss_pred ceEEEEECCCCc-eEEcCCCCCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCC-cEEEeccCCCccCC
Q 012755 314 TCGEEYNLETRT-WKRIENMYPSNVGTQSNPAMSSPPLVAVV-NNQLYSADQATNVVKKYNKTNN-SWTVVKRLPVRANS 390 (457)
Q Consensus 314 ~~~~~yd~~t~~-W~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~g~ly~~gg~~~~v~~Yd~~~~-~W~~v~~~p~~~~~ 390 (457)
..+.+||+.... |+.-... . .. ...+.. +|.||+.. ..+.+.+||+... .|+.- ++....
T Consensus 235 ~gl~~~~~~g~~~~~~~~~~-~----------~~--~~~~~~~~g~l~v~t-~~ggl~~~d~~g~~~~~~~--~~~~~~- 297 (330)
T 3hxj_A 235 GHLYAINPDGTEKWRFKTGK-R----------IE--SSPVIGNTDTIYFGS-YDGHLYAINPDGTEKWNFE--TGSWII- 297 (330)
T ss_dssp TEEEEECTTSCEEEEEECSS-C----------CC--SCCEECTTSCEEEEC-TTCEEEEECTTSCEEEEEE--CSSCCC-
T ss_pred CeEEEECCCCCEeEEeeCCC-C----------cc--ccceEcCCCeEEEec-CCCCEEEECCCCcEEEEEE--cCCccc-
Confidence 457788875543 5432211 1 11 112333 67788653 4458999998544 46542 222111
Q ss_pred CCcceEEEEE-eCCEEEEEcCcC
Q 012755 391 FNGWGLAFKA-CGNSLLVIGGHR 412 (457)
Q Consensus 391 ~~~~~~~~~~-~~g~lyv~GG~~ 412 (457)
.+++. .+|+||+ |+..
T Consensus 298 -----~~~~~d~~g~l~~-gt~~ 314 (330)
T 3hxj_A 298 -----ATPVIDENGTIYF-GTRN 314 (330)
T ss_dssp -----SCCEECTTCCEEE-ECTT
T ss_pred -----cceEEcCCCEEEE-EcCC
Confidence 11223 5788887 4444
No 212
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=91.98 E-value=4.3 Score=39.23 Aligned_cols=135 Identities=16% Similarity=0.177 Sum_probs=73.9
Q ss_pred ceEEEEeCCCCcEEECCCCCCCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCC
Q 012755 266 KSAELYNSELGTWETLPDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNP 343 (457)
Q Consensus 266 ~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~ 343 (457)
+.+.++|..+++...+-.+.........+.+ +|+..+.|+.+ ..+.+||..+++-... +..
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D------g~v~iWd~~~~~~~~~--~~~--------- 187 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS------AEVQLWDVQQQKRLRN--MTS--------- 187 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEE--ECC---------
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC------CeEEEEEcCCCcEEEE--EeC---------
Confidence 4688889888876655333322222222222 67777777643 3578899988754322 211
Q ss_pred CCCCCCEEEEECCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEE
Q 012755 344 AMSSPPLVAVVNNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHS 423 (457)
Q Consensus 344 ~~r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~ 423 (457)
.......+..++.+.+.|+....+..+|......... .+..... .........+++.++.|+.++ .+.+
T Consensus 188 -h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~-~~~~h~~---~~~~~~~~~~g~~l~s~~~D~------~v~i 256 (420)
T 4gga_A 188 -HSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVA-TLSGHSQ---EVCGLRWAPDGRHLASGGNDN------LVNV 256 (420)
T ss_dssp -CSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEE-EEECCSS---CEEEEEECTTSSEEEEEETTS------CEEE
T ss_pred -CCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeE-Eeccccc---ceeeeeecCCCCeeeeeeccc------cceE
Confidence 2222344556788888888888999999876543221 1111110 000111223556666666553 3666
Q ss_pred eeCCC
Q 012755 424 WDPTD 428 (457)
Q Consensus 424 y~~~~ 428 (457)
|+...
T Consensus 257 ~~~~~ 261 (420)
T 4gga_A 257 WPSAP 261 (420)
T ss_dssp EESSC
T ss_pred Eeecc
Confidence 77665
No 213
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=91.89 E-value=7.7 Score=35.78 Aligned_cols=224 Identities=13% Similarity=0.109 Sum_probs=100.8
Q ss_pred cEEEEEecCccEEEEeCCCCcEE-eCCCCCCCccccCCCeeeE--EeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCC
Q 012755 161 HWVYLACILMPWEAFDPLRQRWM-RLPRMQCDECFTSADKESL--AVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMN 237 (457)
Q Consensus 161 ~~l~~~~~~~~~~~ydp~~~~W~-~l~~~p~~~~~~~~~~~~~--~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp 237 (457)
..++..+....+..||..+.+-. .+.. |...-..+ ..++.+++.|+.+. .+.+||.....-..+..-.
T Consensus 78 ~~l~s~s~D~~v~~wd~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~l~s~s~D~--~i~vwd~~~~~~~~~~~h~ 148 (319)
T 3frx_A 78 AYALSASWDKTLRLWDVATGETYQRFVG-------HKSDVMSVDIDKKASMIISGSRDK--TIKVWTIKGQCLATLLGHN 148 (319)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEEC-------CSSCEEEEEECTTSCEEEEEETTS--CEEEEETTSCEEEEECCCS
T ss_pred CEEEEEeCCCEEEEEECCCCCeeEEEcc-------CCCcEEEEEEcCCCCEEEEEeCCC--eEEEEECCCCeEEEEeccC
Confidence 34444444667888898776432 1111 11100112 22556666666543 5777887654433332111
Q ss_pred CCccceeEEee-------CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEE--ECCEEEEEeccCC
Q 012755 238 LPRCLFGSSSL-------GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFF--MDGKFYIIGGMSS 308 (457)
Q Consensus 238 ~~r~~~~~~~~-------~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~--~~g~iyv~GG~~~ 308 (457)
.. -..+... ++..++.|+.+ ..+.++|..+.+-... +.........+. -++++.+.|+.+
T Consensus 149 ~~--v~~~~~~~~~~~~~~~~~l~s~~~d------~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~sp~g~~l~s~~~d- 217 (319)
T 3frx_A 149 DW--VSQVRVVPNEKADDDSVTIISAGND------KMVKAWNLNQFQIEAD--FIGHNSNINTLTASPDGTLIASAGKD- 217 (319)
T ss_dssp SC--EEEEEECCC------CCEEEEEETT------SCEEEEETTTTEEEEE--ECCCCSCEEEEEECTTSSEEEEEETT-
T ss_pred Cc--EEEEEEccCCCCCCCccEEEEEeCC------CEEEEEECCcchhhee--ecCCCCcEEEEEEcCCCCEEEEEeCC-
Confidence 11 1111111 23355555543 3578888877653321 111111111222 256666666643
Q ss_pred CCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCc-EEEecc-CC
Q 012755 309 PTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV-NNQLYSADQATNVVKKYNKTNNS-WTVVKR-LP 385 (457)
Q Consensus 309 ~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~g~ly~~gg~~~~v~~Yd~~~~~-W~~v~~-~p 385 (457)
..+..||..+.+=... +.. ......++.. ++.+++.+ ..+.+..|+.+... ...+.. ..
T Consensus 218 -----g~i~iwd~~~~~~~~~--~~~----------~~~v~~~~~sp~~~~la~~-~~~~i~v~~~~~~~~~~~~~~~~~ 279 (319)
T 3frx_A 218 -----GEIMLWNLAAKKAMYT--LSA----------QDEVFSLAFSPNRYWLAAA-TATGIKVFSLDPQYLVDDLRPEFA 279 (319)
T ss_dssp -----CEEEEEETTTTEEEEE--EEC----------CSCEEEEEECSSSSEEEEE-ETTEEEEEEETTEEEEEEECCCCT
T ss_pred -----CeEEEEECCCCcEEEE--ecC----------CCcEEEEEEcCCCCEEEEE-cCCCcEEEEeCcCeeeeccCcccc
Confidence 3678899887642211 111 0111112222 45444444 34567777776543 222221 11
Q ss_pred CccCCCCcceEEE-EEeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 386 VRANSFNGWGLAF-KACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 386 ~~~~~~~~~~~~~-~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
.....+......+ ..-+|+.++.|+.++ .+.+||..+
T Consensus 280 ~~~~~~~~~v~~~~~spdg~~l~sg~~Dg------~i~vWd~~t 317 (319)
T 3frx_A 280 GYSKAAEPHAVSLAWSADGQTLFAGYTDN------VIRVWQVMT 317 (319)
T ss_dssp TCCGGGCCCEEEEEECTTSSEEEEEETTS------CEEEEEEEE
T ss_pred ccccCcCcceeEEEECCCCCEEEEeecCc------eEEEEEEee
Confidence 1010011111122 233778888887764 477787654
No 214
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=91.77 E-value=8.2 Score=35.87 Aligned_cols=185 Identities=10% Similarity=0.008 Sum_probs=101.8
Q ss_pred ccEEEEEec-CccEEEEeCCC----CcEEeC-C-CCCCCccccCCCeeeEE--eCCEEEEEceecCCcEEEEEECCCCcE
Q 012755 160 EHWVYLACI-LMPWEAFDPLR----QRWMRL-P-RMQCDECFTSADKESLA--VGTQLLVFGRELSGFAIWMYSLIANCW 230 (457)
Q Consensus 160 ~~~l~~~~~-~~~~~~ydp~~----~~W~~l-~-~~p~~~~~~~~~~~~~~--~~~~lyv~GG~~~~~~v~~yd~~t~~W 230 (457)
+..||+... ...+..+|+.. ..-..+ + .+..| ..+++ .++.||+.-. ....+.++|+....-
T Consensus 41 ~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p-------~glavd~~~~~ly~~d~--~~~~I~~~~~~g~~~ 111 (316)
T 1ijq_A 41 SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP-------DGLAVDWIHSNIYWTDS--VLGTVSVADTKGVKR 111 (316)
T ss_dssp TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC-------CEEEEETTTTEEEEEET--TTTEEEEEETTSSSE
T ss_pred CCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCc-------CEEEEeecCCeEEEEEC--CCCEEEEEeCCCCce
Confidence 456777643 46788888865 221111 1 11111 11233 4789998642 345788999876543
Q ss_pred EeC--CCCCCCccceeEEe--eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE--CCEEEEEe
Q 012755 231 SKC--PQMNLPRCLFGSSS--LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM--DGKFYIIG 304 (457)
Q Consensus 231 ~~l--~~lp~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~G 304 (457)
+.+ ..+..|+ ++++ .++.||+..-. ....++++++....-+.+..-.. ..-.++++- +++||+.-
T Consensus 112 ~~~~~~~~~~P~---~iavdp~~g~ly~~d~~-----~~~~I~~~~~dG~~~~~~~~~~~-~~P~gla~d~~~~~lY~~D 182 (316)
T 1ijq_A 112 KTLFRENGSKPR---AIVVDPVHGFMYWTDWG-----TPAKIKKGGLNGVDIYSLVTENI-QWPNGITLDLLSGRLYWVD 182 (316)
T ss_dssp EEEEECTTCCEE---EEEEETTTTEEEEEECS-----SSCEEEEEETTSCCEEEEECSSC-SCEEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCcc---eEEeCCCCCEEEEEccC-----CCCeEEEEcCCCCCeEEEEECCC-CCceEEEEeccCCEEEEEE
Confidence 333 1233332 3333 47899987421 12578999886544333321111 112233443 68999984
Q ss_pred ccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCc
Q 012755 305 GMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQATNVVKKYNKTNNS 377 (457)
Q Consensus 305 G~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~~ 377 (457)
. ....++++|+....-+.+..... ......++++.++.||+.....+.|.++|+.+++
T Consensus 183 ~------~~~~I~~~d~dg~~~~~~~~~~~---------~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 183 S------KLHSISSIDVNGGNRKTILEDEK---------RLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp T------TTTEEEEEETTSCSCEEEEECTT---------TTSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred C------CCCeEEEEecCCCceEEEeecCC---------ccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCc
Confidence 2 24578999987543333322111 0122346777899999998778899999986653
No 215
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=91.71 E-value=8.4 Score=35.83 Aligned_cols=106 Identities=10% Similarity=0.067 Sum_probs=57.0
Q ss_pred CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEE-ECCEEEEEecCCCeEEEEECCC
Q 012755 297 DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAV-VNNQLYSADQATNVVKKYNKTN 375 (457)
Q Consensus 297 ~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~g~ly~~gg~~~~v~~Yd~~~ 375 (457)
++.+++.|+.+ ..+..||+.+++-..+..... ......++. -++.+++.|+..+.|..||..+
T Consensus 138 ~~~~l~s~s~d------g~i~~wd~~~~~~~~~~~~~~----------~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~ 201 (343)
T 3lrv_A 138 NTEYFIWADNR------GTIGFQSYEDDSQYIVHSAKS----------DVEYSSGVLHKDSLLLALYSPDGILDVYNLSS 201 (343)
T ss_dssp -CCEEEEEETT------CCEEEEESSSSCEEEEECCCS----------SCCCCEEEECTTSCEEEEECTTSCEEEEESSC
T ss_pred CCCEEEEEeCC------CcEEEEECCCCcEEEEEecCC----------CCceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 45666666643 357889998877644322111 111222222 2678888888889999999987
Q ss_pred CcEEEeccCCCccCCCCcceEEEEE-eCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 376 NSWTVVKRLPVRANSFNGWGLAFKA-CGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 376 ~~W~~v~~~p~~~~~~~~~~~~~~~-~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
..-.. ..+.. .+...-..+.. -++..++.|+ ++ .+.+||....
T Consensus 202 ~~~~~-~~~~~---~h~~~v~~l~fs~~g~~l~s~~-~~------~v~iwd~~~~ 245 (343)
T 3lrv_A 202 PDQAS-SRFPV---DEEAKIKEVKFADNGYWMVVEC-DQ------TVVCFDLRKD 245 (343)
T ss_dssp TTSCC-EECCC---CTTSCEEEEEECTTSSEEEEEE-SS------BEEEEETTSS
T ss_pred CCCCc-cEEec---cCCCCEEEEEEeCCCCEEEEEe-CC------eEEEEEcCCC
Confidence 65320 01111 01111112222 2566666666 32 3778888764
No 216
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=91.67 E-value=4.9 Score=36.94 Aligned_cols=185 Identities=11% Similarity=0.058 Sum_probs=92.6
Q ss_pred CEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCC
Q 012755 206 TQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDM 284 (457)
Q Consensus 206 ~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~ 284 (457)
+.||+.+. ....+++|++ +++.+.+.. +... ..+++. -++++|+.... ...+.+||+. ++.+.+...
T Consensus 57 ~~l~~~d~--~~~~i~~~~~-~g~~~~~~~-~~~~-~~gl~~d~dG~l~v~~~~------~~~v~~~~~~-g~~~~~~~~ 124 (305)
T 3dr2_A 57 RTLVWSDL--VGRRVLGWRE-DGTVDVLLD-ATAF-TNGNAVDAQQRLVHCEHG------RRAITRSDAD-GQAHLLVGR 124 (305)
T ss_dssp TEEEEEET--TTTEEEEEET-TSCEEEEEE-SCSC-EEEEEECTTSCEEEEETT------TTEEEEECTT-SCEEEEECE
T ss_pred CEEEEEEC--CCCEEEEEeC-CCCEEEEeC-CCCc-cceeeECCCCCEEEEECC------CCEEEEECCC-CCEEEEEec
Confidence 34666542 2346888888 444433321 1111 122222 26778776321 2468888886 666655321
Q ss_pred CCC----CcceeEEEECCEEEEEe---ccCC--------CCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCC
Q 012755 285 NLP----RKLCSGFFMDGKFYIIG---GMSS--------PTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPP 349 (457)
Q Consensus 285 p~~----r~~~~~~~~~g~iyv~G---G~~~--------~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~ 349 (457)
... +....++.-+|.+|+.- |... .......+++||+.+++.+.+. .. ....
T Consensus 125 ~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~-----------~~p~ 191 (305)
T 3dr2_A 125 YAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DL-----------DHPN 191 (305)
T ss_dssp ETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EE-----------SSEE
T ss_pred cCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cC-----------CCCc
Confidence 111 11112222378899852 2110 0011357899999888887765 11 1112
Q ss_pred EEEEE-CC-EEEEEecC-----CCeEEEEECCCCcEEE---eccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceE
Q 012755 350 LVAVV-NN-QLYSADQA-----TNVVKKYNKTNNSWTV---VKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEII 419 (457)
Q Consensus 350 ~~~~~-~g-~ly~~gg~-----~~~v~~Yd~~~~~W~~---v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~ 419 (457)
+++.. ++ .||+.... .+.|++||...+.... +...+.. .. .+.+ ..-+|+||+..+ .
T Consensus 192 gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~--~p--dgi~-~d~~G~lwv~~~-~------- 258 (305)
T 3dr2_A 192 GLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDG--LP--DGFC-VDRGGWLWSSSG-T------- 258 (305)
T ss_dssp EEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSS--CC--CSEE-ECTTSCEEECCS-S-------
T ss_pred ceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCC--CC--CeEE-ECCCCCEEEecC-C-------
Confidence 23332 44 58887644 2689999987654322 1111111 11 1222 234677887542 1
Q ss_pred EEEEeeCCC
Q 012755 420 VLHSWDPTD 428 (457)
Q Consensus 420 ~v~~y~~~~ 428 (457)
.+.+|+++.
T Consensus 259 gv~~~~~~g 267 (305)
T 3dr2_A 259 GVCVFDSDG 267 (305)
T ss_dssp EEEEECTTS
T ss_pred cEEEECCCC
Confidence 388899864
No 217
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=91.65 E-value=10 Score=39.44 Aligned_cols=146 Identities=13% Similarity=0.120 Sum_probs=69.3
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCC-ccceeEEee--CC--EEEEEeeecCCCCccceEEEEeCCCCcEE
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLP-RCLFGSSSL--GE--VAIVAGGTDKNGCILKSAELYNSELGTWE 279 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~-r~~~~~~~~--~~--~iyv~GG~~~~~~~~~~v~~yd~~t~~W~ 279 (457)
++..++.|+.+ ..+.+||.....-..+...... +.....+.+ ++ ..++.|+.+ ..+.++|..+.+-.
T Consensus 483 ~~~~l~s~s~D--~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d------~~v~vwd~~~~~~~ 554 (694)
T 3dm0_A 483 DNRQIVSASRD--RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD------KTVKVWNLSNCKLR 554 (694)
T ss_dssp TSSCEEEEETT--SCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETT------SCEEEEETTTCCEE
T ss_pred CCCEEEEEeCC--CEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCC------CeEEEEECCCCcEE
Confidence 45555666543 3577778655432222211111 111112222 22 355556543 46888998876643
Q ss_pred ECCCCCCCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCE
Q 012755 280 TLPDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQ 357 (457)
Q Consensus 280 ~~~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ 357 (457)
.. +.........+.+ ++++.+.|+.+ ..+..||..+.+-. ..+.. ......++...+.
T Consensus 555 ~~--~~~h~~~v~~v~~spdg~~l~sg~~D------g~i~iwd~~~~~~~--~~~~~----------~~~v~~~~~sp~~ 614 (694)
T 3dm0_A 555 ST--LAGHTGYVSTVAVSPDGSLCASGGKD------GVVLLWDLAEGKKL--YSLEA----------NSVIHALCFSPNR 614 (694)
T ss_dssp EE--ECCCSSCEEEEEECTTSSEEEEEETT------SBCEEEETTTTEEE--ECCBC----------SSCEEEEEECSSS
T ss_pred EE--EcCCCCCEEEEEEeCCCCEEEEEeCC------CeEEEEECCCCceE--EEecC----------CCcEEEEEEcCCC
Confidence 22 1111111122222 56777776643 35678998876532 22211 1111222333333
Q ss_pred EEEEecCCCeEEEEECCCCcE
Q 012755 358 LYSADQATNVVKKYNKTNNSW 378 (457)
Q Consensus 358 ly~~gg~~~~v~~Yd~~~~~W 378 (457)
.+++.+..+.+.+||.+++.-
T Consensus 615 ~~l~~~~~~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 615 YWLCAATEHGIKIWDLESKSI 635 (694)
T ss_dssp SEEEEEETTEEEEEETTTTEE
T ss_pred cEEEEEcCCCEEEEECCCCCC
Confidence 333444556799999988754
No 218
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=91.62 E-value=7.4 Score=36.63 Aligned_cols=204 Identities=11% Similarity=-0.072 Sum_probs=100.1
Q ss_pred EeCCEEEEEcee-cCCcEEEEEECCCCcEEeCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEEC
Q 012755 203 AVGTQLLVFGRE-LSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETL 281 (457)
Q Consensus 203 ~~~~~lyv~GG~-~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~ 281 (457)
..++..+++... .....++++|..+++-+.+...+..........-+++..+++.. ...++++|+.+++-+.+
T Consensus 44 SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~------~~~l~~~d~~~g~~~~~ 117 (388)
T 3pe7_A 44 TRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKD------GRNLMRVDLATLEENVV 117 (388)
T ss_dssp CTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEET------TTEEEEEETTTCCEEEE
T ss_pred CCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeC------CCeEEEEECCCCcceee
Confidence 445554444443 44557999999999888876544322211122234443333331 14788899998876655
Q ss_pred CCCCCCCcceeEE--EECCEEEEEe---ccCC-------------CCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCC
Q 012755 282 PDMNLPRKLCSGF--FMDGKFYIIG---GMSS-------------PTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNP 343 (457)
Q Consensus 282 ~~~p~~r~~~~~~--~~~g~iyv~G---G~~~-------------~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~ 343 (457)
...+......... .-+++.++.- +... .......++.+|+.+++-..+.....
T Consensus 118 ~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~--------- 188 (388)
T 3pe7_A 118 YQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQ--------- 188 (388)
T ss_dssp EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESS---------
T ss_pred eechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCc---------
Confidence 4444322211111 1244433311 0000 01123678999999887666543211
Q ss_pred CCCCCCEEEEE-CCEEEEEecC------CCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCE-EEEEcCcCCCC
Q 012755 344 AMSSPPLVAVV-NNQLYSADQA------TNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNS-LLVIGGHRELQ 415 (457)
Q Consensus 344 ~~r~~~~~~~~-~g~ly~~gg~------~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~-lyv~GG~~~~~ 415 (457)
........- +|+.+++... ...++.+|.++...+.+........ .......-+|+ |+.+....+.
T Consensus 189 --~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~----~~~~~~spdg~~l~~~~~~~~~- 261 (388)
T 3pe7_A 189 --WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGES----CTHEFWVPDGSALVYVSYLKGS- 261 (388)
T ss_dssp --CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEE----EEEEEECTTSSCEEEEEEETTC-
T ss_pred --cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcc----cccceECCCCCEEEEEecCCCC-
Confidence 111112223 4554333221 4489999998877666643221100 00111222554 5444432221
Q ss_pred CceEEEEEeeCCCC
Q 012755 416 GEIIVLHSWDPTDG 429 (457)
Q Consensus 416 ~~~~~v~~y~~~~~ 429 (457)
....+++||++++
T Consensus 262 -~~~~l~~~d~~~g 274 (388)
T 3pe7_A 262 -PDRFIYSADPETL 274 (388)
T ss_dssp -CCEEEEEECTTTC
T ss_pred -CcceEEEEecCCC
Confidence 1235889999875
No 219
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=91.58 E-value=8.9 Score=35.85 Aligned_cols=224 Identities=12% Similarity=0.067 Sum_probs=109.7
Q ss_pred cEEEEEecCccEEEEeCCCCcEEeCCCCC-CCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCC
Q 012755 161 HWVYLACILMPWEAFDPLRQRWMRLPRMQ-CDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLP 239 (457)
Q Consensus 161 ~~l~~~~~~~~~~~ydp~~~~W~~l~~~p-~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~ 239 (457)
..+|+++....++.-+-.-.+|..+.... .+..... ..+.-++.+|+.|.. ..+++-+-.-.+|+.+.... +
T Consensus 90 ~~~~~~g~~g~i~~S~DgG~tW~~~~~~~~~~~~~~~---i~~~~~~~~~~~~~~---g~v~~S~DgG~tW~~~~~~~-~ 162 (327)
T 2xbg_A 90 NEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPGSPRL---IKALGNGSAEMITNV---GAIYRTKDSGKNWQALVQEA-I 162 (327)
T ss_dssp TEEEEEEETTEEEEESSTTSSCEECCCCTTCSSCEEE---EEEEETTEEEEEETT---CCEEEESSTTSSEEEEECSC-C
T ss_pred CeEEEEECCCeEEEECCCCCCceECccccCCCCCeEE---EEEECCCCEEEEeCC---ccEEEEcCCCCCCEEeecCC-C
Confidence 34555554444444344456899876432 1111111 122346788877632 23555444466899875422 2
Q ss_pred ccceeEEee-CCEEEEEeeecCCCCccceEEEE-eCCCCcEEECCCCCCCCcceeEEE-ECCEEEEEeccCCCCCCCceE
Q 012755 240 RCLFGSSSL-GEVAIVAGGTDKNGCILKSAELY-NSELGTWETLPDMNLPRKLCSGFF-MDGKFYIIGGMSSPTDPLTCG 316 (457)
Q Consensus 240 r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~y-d~~t~~W~~~~~~p~~r~~~~~~~-~~g~iyv~GG~~~~~~~~~~~ 316 (457)
...++++.. ++.+|++|. . ..++.- |..-.+|+.+.. +.+...+.++. -++.+|+.+.. ..+
T Consensus 163 ~~~~~~~~~~~~~~~~~g~-~------G~~~~S~d~gG~tW~~~~~-~~~~~~~~~~~~~~g~~~~~~~~-------G~~ 227 (327)
T 2xbg_A 163 GVMRNLNRSPSGEYVAVSS-R------GSFYSTWEPGQTAWEPHNR-TTSRRLHNMGFTPDGRLWMIVNG-------GKI 227 (327)
T ss_dssp CCEEEEEECTTSCEEEEET-T------SSEEEEECTTCSSCEEEEC-CSSSCEEEEEECTTSCEEEEETT-------TEE
T ss_pred cceEEEEEcCCCcEEEEEC-C------CcEEEEeCCCCCceeECCC-CCCCccceeEECCCCCEEEEeCC-------ceE
Confidence 233444433 456665542 1 123333 322578998743 22333333333 36788877531 123
Q ss_pred EEEECC-CCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEEeccC-CCccCCCCc
Q 012755 317 EEYNLE-TRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV-NNQLYSADQATNVVKKYNKTNNSWTVVKRL-PVRANSFNG 393 (457)
Q Consensus 317 ~~yd~~-t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~-p~~~~~~~~ 393 (457)
...+.. ..+|+.+..... +.......++.. ++.+|++|. .+.+++-.-...+|+.+... +.+.. .
T Consensus 228 ~~s~~D~G~tW~~~~~~~~--------~~~~~~~~v~~~~~~~~~~~g~-~g~i~~S~DgG~tW~~~~~~~~~~~~---~ 295 (327)
T 2xbg_A 228 AFSDPDNSENWGELLSPLR--------RNSVGFLDLAYRTPNEVWLAGG-AGALLCSQDGGQTWQQDVDVKKVPSN---F 295 (327)
T ss_dssp EEEETTEEEEECCCBCTTS--------SCCSCEEEEEESSSSCEEEEES-TTCEEEESSTTSSCEECGGGTTSSSC---C
T ss_pred EEecCCCCCeeEeccCCcc--------cCCcceEEEEecCCCEEEEEeC-CCeEEEeCCCCcccEEcCccCCCCCC---e
Confidence 344322 457987753211 001111222222 678888875 34565544456799988632 21111 1
Q ss_pred ceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeC
Q 012755 394 WGLAFKACGNSLLVIGGHRELQGEIIVLHSWDP 426 (457)
Q Consensus 394 ~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~ 426 (457)
..+.. .-+++++++|. .+ .++.++.
T Consensus 296 ~~v~~-~~~~~~~~~G~-~G------~i~~~~~ 320 (327)
T 2xbg_A 296 YKILF-FSPDQGFILGQ-KG------ILLRYVT 320 (327)
T ss_dssp CEEEE-EETTEEEEECS-TT------EEEEECC
T ss_pred EEEEE-ECCCceEEEcC-Cc------eEEEEcC
Confidence 22222 24677777664 32 4666665
No 220
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=91.06 E-value=7.5 Score=37.49 Aligned_cols=194 Identities=12% Similarity=0.118 Sum_probs=108.3
Q ss_pred CCcEEe--CCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeC-----CCCc-EEECCCC-CCCCcceeEEEEC
Q 012755 227 ANCWSK--CPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNS-----ELGT-WETLPDM-NLPRKLCSGFFMD 297 (457)
Q Consensus 227 t~~W~~--l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~-----~t~~-W~~~~~~-p~~r~~~~~~~~~ 297 (457)
.+.|++ ++.+|..-..|+.+.+++.=|++|=.+++-.+..--..|=+ -... =+.++.- ...-+..+.-.++
T Consensus 269 ~spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvkyYd 348 (670)
T 3ju4_A 269 KSPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKYYD 348 (670)
T ss_dssp TSCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEEET
T ss_pred cCCceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhhccccccchhhhhC
Confidence 344643 55566556678889999888899877765433222222322 1111 2333322 1111234455789
Q ss_pred CEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecC----------C--
Q 012755 298 GKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQA----------T-- 365 (457)
Q Consensus 298 g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~----------~-- 365 (457)
|++|++--.......-+.+.+-+.....|+.+.-... . .....-.+..++.||++|.. .
T Consensus 349 gvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~n--------v-HhtnlPFakvgD~l~mFgsERA~nEWE~G~pD~ 419 (670)
T 3ju4_A 349 GVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHN--------V-HHTTLPFAKVGDDLIMFGSERAENEWEAGAPDD 419 (670)
T ss_dssp TEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTC--------C-CSSCCCEEEETTEEEEEEECSSTTCSSTTCCCC
T ss_pred CEEEEEecCcCCCCCcceeeeecccCCchhheecccc--------c-cccCCCcceeCCEEEEEeccccccccccCCCcc
Confidence 9999986544443445677888888889998743211 1 33344467789999999841 0
Q ss_pred ------Ce--EEE-----EECCCCcEEEeccCC-CccCCCCcceEE-EEEeCCEE-EEEcCcCCC---------------
Q 012755 366 ------NV--VKK-----YNKTNNSWTVVKRLP-VRANSFNGWGLA-FKACGNSL-LVIGGHREL--------------- 414 (457)
Q Consensus 366 ------~~--v~~-----Yd~~~~~W~~v~~~p-~~~~~~~~~~~~-~~~~~g~l-yv~GG~~~~--------------- 414 (457)
-. +.+ +..+.-+|..+..-- ......+..|+. ++..++-| |+|||.+--
T Consensus 420 RY~a~yPRtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd~~np~s~gdN~~k~~~~ 499 (670)
T 3ju4_A 420 RYKASYPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGEDHFNPWTYGDNSAKDPFK 499 (670)
T ss_dssp CSSCBCCEEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEBCSCCCCTTTTTTTCCTTS
T ss_pred cccccCCceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCcccCCccccccccccCccc
Confidence 01 111 334555788776322 111122244444 34557754 677876521
Q ss_pred -CCceEEEEEeeCCCC
Q 012755 415 -QGEIIVLHSWDPTDG 429 (457)
Q Consensus 415 -~~~~~~v~~y~~~~~ 429 (457)
.+...++|+|....+
T Consensus 500 ~~Ghp~dlY~~ri~i~ 515 (670)
T 3ju4_A 500 SDGHPSDLYCYKMKIG 515 (670)
T ss_dssp TTCCCCEEEEEEEECS
T ss_pred cCCCCcceEEEEEEec
Confidence 124578888877653
No 221
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=91.02 E-value=0.12 Score=49.92 Aligned_cols=145 Identities=12% Similarity=0.129 Sum_probs=60.2
Q ss_pred EeeCCEEEEEeeecCCCCccceEEEEeCCCCc--EEECCCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCC
Q 012755 246 SSLGEVAIVAGGTDKNGCILKSAELYNSELGT--WETLPDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLET 323 (457)
Q Consensus 246 ~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t 323 (457)
++.++.||+.+. ...+..+|..+++ |+.-. . + .....++.++++|+.++. ...+.++|.++
T Consensus 6 ~v~~~~v~~gs~-------dg~v~a~d~~tG~~~W~~~~--~-~-~~s~p~~~~g~~~v~~s~------dg~l~a~d~~t 68 (369)
T 2hz6_A 6 TLPETLLFVSTL-------DGSLHAVSKRTGSIKWTLKE--D-P-VLQVPTHVEEPAFLPDPN------DGSLYTLGSKN 68 (369)
T ss_dssp --CTTEEEEEET-------TSEEEEEETTTCCEEEEEEC--C-C-SCCCC-----CCEEECTT------TCCEEEC----
T ss_pred eeeCCEEEEEcC-------CCEEEEEECCCCCEEEEecC--C-C-ceecceEcCCCEEEEeCC------CCEEEEEECCC
Confidence 345677776532 1468999998876 87643 1 1 112334457778887542 23578899866
Q ss_pred C--ceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCC--cEEEeccCCCccCCCCcceEEEE
Q 012755 324 R--TWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQATNVVKKYNKTNN--SWTVVKRLPVRANSFNGWGLAFK 399 (457)
Q Consensus 324 ~--~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~--~W~~v~~~p~~~~~~~~~~~~~~ 399 (457)
+ .|+.-...+.. ....+ ++..++.|| +|...+.++.+|++++ .|+.-... .. ..+
T Consensus 69 G~~~w~~~~~~~~~---------~~~sp-~~~~~~~v~-~g~~dg~v~a~D~~tG~~~w~~~~~~--~~--------~~~ 127 (369)
T 2hz6_A 69 NEGLTKLPFTIPEL---------VQASP-CRSSDGILY-MGKKQDIWYVIDLLTGEKQQTLSSAF--AD--------SLS 127 (369)
T ss_dssp -CCSEECSCCHHHH---------HTTCS-CC-----CC-CCEEEEEEEEECCC---------------------------
T ss_pred CceeeeeeccCccc---------cccCc-eEecCCEEE-EEeCCCEEEEEECCCCcEEEEecCCC--cc--------ccc
Confidence 5 46532211110 00111 111345554 3434457888988865 46543211 00 111
Q ss_pred EeCCEEEEEcCcCCCCCceEEEEEeeCCCCCCCCCCeeE
Q 012755 400 ACGNSLLVIGGHRELQGEIIVLHSWDPTDGNSGEAQWNE 438 (457)
Q Consensus 400 ~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~~w~~~~W~~ 438 (457)
..++.||+ |+.+ ..++.||+.+ ++..|+.
T Consensus 128 p~~~~v~~-~~~d------g~v~a~d~~t---G~~~W~~ 156 (369)
T 2hz6_A 128 PSTSLLYL-GRTE------YTITMYDTKT---RELRWNA 156 (369)
T ss_dssp -----EEE-EEEE------EEEECCCSSS---SSCCCEE
T ss_pred ccCCEEEE-EecC------CEEEEEECCC---CCEEEeE
Confidence 23455555 4332 3688899987 5667873
No 222
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=91.00 E-value=17 Score=37.91 Aligned_cols=203 Identities=9% Similarity=-0.013 Sum_probs=96.7
Q ss_pred EEEEEecCccEEEEeCCCC---cEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCC
Q 012755 162 WVYLACILMPWEAFDPLRQ---RWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNL 238 (457)
Q Consensus 162 ~l~~~~~~~~~~~ydp~~~---~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~ 238 (457)
.|++.. ...++.+|..+. .-..+...... ........+|+.++++.. ..++++|..+++...+.....
T Consensus 122 ~l~~~~-~~~i~~~d~~~~~~~~~~~l~~~~~~-----~~~~~~SPDG~~la~~~~---~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 122 RLLFPL-GGELYLYDLKQEGKAAVRQLTHGEGF-----ATDAKLSPKGGFVSFIRG---RNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp EEEEEE-TTEEEEEESSSCSTTSCCBCCCSSSC-----EEEEEECTTSSEEEEEET---TEEEEEETTTTEEEECCCCCC
T ss_pred EEEEEe-CCcEEEEECCCCCcceEEEcccCCcc-----cccccCCCCCCEEEEEeC---CcEEEEecCCCCEEEeccCCc
Confidence 344433 377888898776 43333322111 101123345654444432 379999999988877644322
Q ss_pred Ccc---------------ceeEE-eeCCEEEEEeeecCC---------------------------CCccceEEEEeCCC
Q 012755 239 PRC---------------LFGSS-SLGEVAIVAGGTDKN---------------------------GCILKSAELYNSEL 275 (457)
Q Consensus 239 ~r~---------------~~~~~-~~~~~iyv~GG~~~~---------------------------~~~~~~v~~yd~~t 275 (457)
... ..+++ .-+++.++++..++. ......++++|..+
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 272 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE 272 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence 100 01111 224444444433221 01123788889888
Q ss_pred -CcEEECCCCC-CCCc-ceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEE
Q 012755 276 -GTWETLPDMN-LPRK-LCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVA 352 (457)
Q Consensus 276 -~~W~~~~~~p-~~r~-~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~ 352 (457)
++-..+.... .... ..... -+|+..+++..+.. .....++.+|+.+++...+...... . .. ........
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~-~~~~~i~~~d~~~g~~~~~~~~~~~----~-~~-~~~~~~~~ 344 (741)
T 2ecf_A 273 QAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRD-QKKLDLVEVTLASNQQRVLAHETSP----T-WV-PLHNSLRF 344 (741)
T ss_dssp TCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETT-SSEEEEEEEETTTCCEEEEEEEECS----S-CC-CCCSCCEE
T ss_pred CCceEEecCCCCcceEEEEEEe-CCCCEEEEEEeccc-CCeEEEEEEECCCCceEEEEEcCCC----C-cC-CcCCceEE
Confidence 7655443221 1111 11122 45543333332211 1246789999999887765432110 0 00 00011122
Q ss_pred EECCEEEEEecCC--CeEEEEECCCCcEEEec
Q 012755 353 VVNNQLYSADQAT--NVVKKYNKTNNSWTVVK 382 (457)
Q Consensus 353 ~~~g~ly~~gg~~--~~v~~Yd~~~~~W~~v~ 382 (457)
.-+|++++.+... ..++.+|.... .+.+.
T Consensus 345 spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~ 375 (741)
T 2ecf_A 345 LDDGSILWSSERTGFQHLYRIDSKGK-AAALT 375 (741)
T ss_dssp CTTSCEEEEECTTSSCEEEEECSSSC-EEESC
T ss_pred CCCCeEEEEecCCCccEEEEEcCCCC-eeeee
Confidence 3367766665433 46888887666 55554
No 223
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=90.94 E-value=7.6 Score=35.10 Aligned_cols=136 Identities=16% Similarity=0.183 Sum_probs=73.4
Q ss_pred ceEEEEeCCCCcEEECCCCCCCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCC
Q 012755 266 KSAELYNSELGTWETLPDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNP 343 (457)
Q Consensus 266 ~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~ 343 (457)
..+.++|..+++....-.+.........+.+ +++..+.|+.+ ..+..||.++++-..... .
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D------g~v~iw~~~~~~~~~~~~--~--------- 107 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS------AEVQLWDVQQQKRLRNMT--S--------- 107 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEE--C---------
T ss_pred CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC------CcEEEeecCCceeEEEec--C---------
Confidence 4688999999886554332222222222222 66777777643 367889998876433221 1
Q ss_pred CCCCCCEEEEECCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEE
Q 012755 344 AMSSPPLVAVVNNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHS 423 (457)
Q Consensus 344 ~~r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~ 423 (457)
..........++.+.+.|+..+.+..++.......... +..... .........++++++.|+.++ .+.+
T Consensus 108 -h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~l~s~~~d~------~i~i 176 (318)
T 4ggc_A 108 -HSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVAT-LSGHSQ---EVCGLRWAPDGRHLASGGNDN------LVNV 176 (318)
T ss_dssp -CSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEE-EECCSS---CEEEEEECTTSSEEEEEETTS------CEEE
T ss_pred -ccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEE-EcCccC---ceEEEEEcCCCCEEEEEecCc------ceeE
Confidence 11222344556677777777778888887765433221 111110 111112233566667776653 4777
Q ss_pred eeCCCC
Q 012755 424 WDPTDG 429 (457)
Q Consensus 424 y~~~~~ 429 (457)
||..+.
T Consensus 177 wd~~~~ 182 (318)
T 4ggc_A 177 WPSAPG 182 (318)
T ss_dssp EESSCB
T ss_pred EECCCC
Confidence 888763
No 224
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=90.60 E-value=9.3 Score=34.35 Aligned_cols=183 Identities=12% Similarity=0.080 Sum_probs=86.9
Q ss_pred eCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCC
Q 012755 204 VGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPD 283 (457)
Q Consensus 204 ~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~ 283 (457)
.++..++.|+.. ..+.+||........ .....+.........++..++.|+.+ ..+.+||..+..-. ...
T Consensus 112 ~~~~~l~~~~~d--~~i~~~d~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~-~~~ 181 (313)
T 3odt_A 112 FQDGVVISGSWD--KTAKVWKEGSLVYNL-QAHNASVWDAKVVSFSENKFLTASAD------KTIKLWQNDKVIKT-FSG 181 (313)
T ss_dssp EETTEEEEEETT--SEEEEEETTEEEEEE-ECCSSCEEEEEEEETTTTEEEEEETT------SCEEEEETTEEEEE-ECS
T ss_pred ecCCEEEEEeCC--CCEEEEcCCcEEEec-ccCCCceeEEEEccCCCCEEEEEECC------CCEEEEecCceEEE-Eec
Confidence 345555555543 357788832222211 11111111111112256666666643 35777883322222 211
Q ss_pred CCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEE
Q 012755 284 MNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSA 361 (457)
Q Consensus 284 ~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~ 361 (457)
............-++. ++.|+. ...+..||..+.+-... ... .......+.+ +++ ++.
T Consensus 182 ~~~~~i~~~~~~~~~~-~~~~~~------dg~i~i~d~~~~~~~~~--~~~----------~~~~i~~~~~~~~~~-l~~ 241 (313)
T 3odt_A 182 IHNDVVRHLAVVDDGH-FISCSN------DGLIKLVDMHTGDVLRT--YEG----------HESFVYCIKLLPNGD-IVS 241 (313)
T ss_dssp SCSSCEEEEEEEETTE-EEEEET------TSEEEEEETTTCCEEEE--EEC----------CSSCEEEEEECTTSC-EEE
T ss_pred cCcccEEEEEEcCCCe-EEEccC------CCeEEEEECCchhhhhh--hhc----------CCceEEEEEEecCCC-EEE
Confidence 1111112222334677 555543 24688899887653221 111 1111122222 454 556
Q ss_pred ecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEE-EeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 362 DQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFK-ACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 362 gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~-~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
++..+.+..||..+.+-...-..+... -..+. .-+++ ++.|+.++ .+.+|+.+++
T Consensus 242 ~~~dg~v~iwd~~~~~~~~~~~~~~~~------i~~~~~~~~~~-~~~~~~dg------~i~iw~~~~~ 297 (313)
T 3odt_A 242 CGEDRTVRIWSKENGSLKQVITLPAIS------IWSVDCMSNGD-IIVGSSDN------LVRIFSQEKS 297 (313)
T ss_dssp EETTSEEEEECTTTCCEEEEEECSSSC------EEEEEECTTSC-EEEEETTS------CEEEEESCGG
T ss_pred EecCCEEEEEECCCCceeEEEeccCce------EEEEEEccCCC-EEEEeCCC------cEEEEeCCCC
Confidence 777889999999887654433222211 11222 23566 44566553 4888999875
No 225
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=90.41 E-value=1.2 Score=43.59 Aligned_cols=106 Identities=8% Similarity=-0.009 Sum_probs=58.0
Q ss_pred CEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCC-CCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCce
Q 012755 250 EVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMN-LPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTW 326 (457)
Q Consensus 250 ~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p-~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W 326 (457)
+.+.+.|+.+ ..+.++|..++.-...-... ....-.+++.. ++.+.+.|+.+ ..+.+||.+++..
T Consensus 132 ~~~lasGs~d------g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D------~~v~iwd~~~~~~ 199 (435)
T 4e54_B 132 PSTVAVGSKG------GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME------GTTRLQDFKGNIL 199 (435)
T ss_dssp TTCEEEEETT------SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS------SCEEEEETTSCEE
T ss_pred CCEEEEEeCC------CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC------CEEEEeeccCCce
Confidence 4455666644 35777887766532221111 11112233332 45566666544 3478899988766
Q ss_pred EEcCCCCCCCCCCCCCCCCCCCCEEE-EECCEEEEEecCCCeEEEEECCCC
Q 012755 327 KRIENMYPSNVGTQSNPAMSSPPLVA-VVNNQLYSADQATNVVKKYNKTNN 376 (457)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~g~ly~~gg~~~~v~~Yd~~~~ 376 (457)
..+...... .....++. .-++.+++.|+..+.|..||...+
T Consensus 200 ~~~~~~~~~---------~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~ 241 (435)
T 4e54_B 200 RVFASSDTI---------NIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK 241 (435)
T ss_dssp EEEECCSSC---------SCCCCCEEEETTTTEEEEECSSSBEEEEESSSC
T ss_pred eEEeccCCC---------CccEEEEEECCCCCEEEEEeCCCcEeeeccCcc
Confidence 555432220 11111222 237788888888889999998764
No 226
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=90.25 E-value=8.8 Score=33.53 Aligned_cols=143 Identities=13% Similarity=0.056 Sum_probs=74.9
Q ss_pred eEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEE--EC----CCCCCCCcceeEEEE--CCEEEEEeccCCCCCCCce
Q 012755 244 GSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWE--TL----PDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTC 315 (457)
Q Consensus 244 ~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~--~~----~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~ 315 (457)
+++..++++|+|=| ..+++++.....+. .+ +.+|.. .. ++... ++++|++-| +.
T Consensus 28 Ai~~~~g~~y~Fkg--------~~~wr~~~~~~~~~p~~I~~~wp~Lp~~-iD-Aa~~~~~~~~iyfFkG--------~~ 89 (207)
T 1pex_A 28 AITSLRGETMIFKD--------RFFWRLHPQQVDAELFLTKSFWPELPNR-ID-AAYEHPSHDLIFIFRG--------RK 89 (207)
T ss_dssp EEEEETTEEEEEET--------TEEEEECSSSSCCEEEEHHHHCTTSCSS-CC-EEEEETTTTEEEEEET--------TE
T ss_pred EEEeCCCcEEEEEC--------CEEEEEeCCCcCCCceehhHhccCCCCC-cc-EEEEeccCCcEEEEcc--------CE
Confidence 34557899999965 34666665443321 11 334421 11 22233 589999965 24
Q ss_pred EEEEECCCCce---EEcCCCCCCCCCCCCCCCCCCCCEEEEE---CCEEEEEecCCCeEEEEECCCCcEE-----Ee---
Q 012755 316 GEEYNLETRTW---KRIENMYPSNVGTQSNPAMSSPPLVAVV---NNQLYSADQATNVVKKYNKTNNSWT-----VV--- 381 (457)
Q Consensus 316 ~~~yd~~t~~W---~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~g~ly~~gg~~~~v~~Yd~~~~~W~-----~v--- 381 (457)
+++|+..+-.- ..+..+ +. |..-....+++. +|++|++-| +..|.||..+++=. .+
T Consensus 90 ~w~~~~~~~~~gyPk~I~~~-------Gl-P~~~~~IDAA~~~~~~gk~yfFkG--~~ywr~d~~~~~~d~gyPr~i~~~ 159 (207)
T 1pex_A 90 FWALNGYDILEGYPKKISEL-------GL-PKEVKKISAAVHFEDTGKTLLFSG--NQVWRYDDTNHIMDKDYPRLIEED 159 (207)
T ss_dssp EEEESTTCCCTTCSEESTTT-------TC-CTTCCCCCEEEECTTTSEEEEEET--TEEEEEETTTTEECSSCCCBHHHH
T ss_pred EEEEeCCeeccCCceecccc-------CC-CCCCccccEEEEeCCCCEEEEEeC--CEEEEEeCcCccccCCCCccHHHc
Confidence 56675322110 112111 00 111112233333 489999966 68999998765311 00
Q ss_pred -ccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 382 -KRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 382 -~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
+.+|.. .-+| ...+|++|.|-|. ..+.||..+.
T Consensus 160 ~~Gip~~------iDaA-f~~~g~~YfFkg~--------~y~rf~~~~~ 193 (207)
T 1pex_A 160 FPGIGDK------VDAV-YEKNGYIYFFNGP--------IQFEYSIWSN 193 (207)
T ss_dssp STTSCSC------CSEE-EEETTEEEEEETT--------EEEEEETTTT
T ss_pred CCCCCCC------ccEE-EEcCCcEEEEECC--------EEEEEeCCcc
Confidence 122221 1233 3569999999775 3788888774
No 227
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=90.17 E-value=9.8 Score=38.87 Aligned_cols=243 Identities=9% Similarity=-0.045 Sum_probs=115.9
Q ss_pred ccEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEE-----eCCEEEEEceecCCcEEEEEECCCCcEEe-C
Q 012755 160 EHWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLA-----VGTQLLVFGRELSGFAIWMYSLIANCWSK-C 233 (457)
Q Consensus 160 ~~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~-----~~~~lyv~GG~~~~~~v~~yd~~t~~W~~-l 233 (457)
...+|+.+....+..+|+...+-..+..++......+ ..+. -|..+|+.... .+.+.++|..|.+=.. +
T Consensus 208 Gr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~---ia~s~~~~pDGk~l~v~n~~--~~~v~ViD~~t~~~~~~i 282 (567)
T 1qks_A 208 GRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARS---IETSKMEGWEDKYAIAGAYW--PPQYVIMDGETLEPKKIQ 282 (567)
T ss_dssp SCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEE---EEECCSTTCTTTEEEEEEEE--TTEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCce---eEEccccCCCCCEEEEEEcc--CCeEEEEECCCCcEEEEE
Confidence 4567777666778899985111122222221111111 1223 13466665432 3568888987765432 1
Q ss_pred C--CC--------CCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE-CCE-EE
Q 012755 234 P--QM--------NLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM-DGK-FY 301 (457)
Q Consensus 234 ~--~l--------p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g~-iy 301 (457)
+ .+ |.+|........++..+++-- .....+++.|..+.....+..++..+..|....- +|+ +|
T Consensus 283 ~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~-----~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~ 357 (567)
T 1qks_A 283 STRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV-----KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFI 357 (567)
T ss_dssp ECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE-----TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEE
T ss_pred eccccccccccccCCCceEEEEEcCCCCEEEEEe-----cCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEE
Confidence 1 11 122332222222333333321 1235788888877655444444444554444332 454 44
Q ss_pred EEeccCCCCCCCceEEEEECCCCceEEcCCC-CCCCCCCCCCCCCCCCCEEEEE--CCEEEEEec-CCCeEEEEECCCC-
Q 012755 302 IIGGMSSPTDPLTCGEEYNLETRTWKRIENM-YPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQ-ATNVVKKYNKTNN- 376 (457)
Q Consensus 302 v~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~-~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg-~~~~v~~Yd~~~~- 376 (457)
+... ..+.+.++|+++++=...-+. .. .|.+..+.. ... .+.+|+... ..+.|.++|..+.
T Consensus 358 va~~------~sn~V~ViD~~t~kl~~~i~vgg~-------~Phpg~g~~-~~~p~~g~v~~t~~~g~~~Vsvid~~~~~ 423 (567)
T 1qks_A 358 TAAN------ARNKLVVIDTKEGKLVAIEDTGGQ-------TPHPGRGAN-FVHPTFGPVWATSHMGDDSVALIGTDPEG 423 (567)
T ss_dssp EEEG------GGTEEEEEETTTTEEEEEEECSSS-------SBCCTTCEE-EEETTTEEEEEEEBSSSSEEEEEECCTTT
T ss_pred EEeC------CCCeEEEEECCCCcEEEEEeccCc-------CCCCcccee-eECCCCCcEEEeCCCCCCeEEEecCCCCC
Confidence 4432 246788999998863322111 11 111222222 233 367887753 3467888987763
Q ss_pred ----cEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 377 ----SWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 377 ----~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
.|+.+..++..... ...+....-+..+||---..........+.+||..+
T Consensus 424 ~~~~~~kvv~~i~~~g~g--~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~ 477 (567)
T 1qks_A 424 HPDNAWKILDSFPALGGG--SLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKA 477 (567)
T ss_dssp CTTTBTSEEEEEECSCSC--CCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGG
T ss_pred CccccCEEEEEEecCCCC--CEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCc
Confidence 39888766543210 011211112347888442111100123577788765
No 228
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.15 E-value=5 Score=37.86 Aligned_cols=158 Identities=9% Similarity=-0.042 Sum_probs=76.6
Q ss_pred cEEEEEECCCCcEEeCCCCCCCccce-eEEe-eCCE-EEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEE
Q 012755 218 FAIWMYSLIANCWSKCPQMNLPRCLF-GSSS-LGEV-AIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGF 294 (457)
Q Consensus 218 ~~v~~yd~~t~~W~~l~~lp~~r~~~-~~~~-~~~~-iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~ 294 (457)
..++.+|..+++++.+.. ..+.... ..+. -+++ |++.+...+ .....++++|+.+++.+.+...+. .. ...
T Consensus 216 ~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~~~~~~--~~~~~l~~~d~~~g~~~~l~~~~~--~~-~~~ 289 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKE-HAEGESCTHEFWIPDGSAMAYVSYFKG--QTDRVIYKANPETLENEEVMVMPP--CS-HLM 289 (396)
T ss_dssp CCCEEEETTSCCCEESSC-CCTTEEEEEEEECTTSSCEEEEEEETT--TCCEEEEEECTTTCCEEEEEECCS--EE-EEE
T ss_pred ceEEEEECCCCceeEeec-cCCCccccceEECCCCCEEEEEecCCC--CccceEEEEECCCCCeEEeeeCCC--CC-CCc
Confidence 479999998888777754 2111111 1121 2444 444432222 112459999999988776654432 11 222
Q ss_pred EE-CCEEEEEeccCCC----------CCCCceEEEEECCCCceEEcCCCCCCCCCCC-CCCCCCCCCEEEEECC-EEEEE
Q 012755 295 FM-DGKFYIIGGMSSP----------TDPLTCGEEYNLETRTWKRIENMYPSNVGTQ-SNPAMSSPPLVAVVNN-QLYSA 361 (457)
Q Consensus 295 ~~-~g~iyv~GG~~~~----------~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~-~~~~~r~~~~~~~~~g-~ly~~ 361 (457)
.- +|+++++++.... ......++.+|+.+++...+...... .+.. .............-+| .|+..
T Consensus 290 s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~ 368 (396)
T 3c5m_A 290 SNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTS-WDVLDGDRQITHPHPSFTPNDDGVLFT 368 (396)
T ss_dssp ECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCC-CCCBTTBSSTTCCCCEECTTSSEEEEE
T ss_pred cCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCc-cccccccccCCCCCceEccCCCeEEEE
Confidence 33 7777666542210 01235789999998876655432110 0000 0000000111122244 45544
Q ss_pred ec--CCCeEEEEECCCCcEEEec
Q 012755 362 DQ--ATNVVKKYNKTNNSWTVVK 382 (457)
Q Consensus 362 gg--~~~~v~~Yd~~~~~W~~v~ 382 (457)
.. ....++.+|..+..++.+.
T Consensus 369 s~~~~~~~l~~~~~~~~~~~~~~ 391 (396)
T 3c5m_A 369 SDFEGVPAIYIADVPESYKHLEH 391 (396)
T ss_dssp ECTTSSCEEEEEECCTTCC----
T ss_pred ecCCCCceEEEEEEccccccccc
Confidence 42 2346888888887776553
No 229
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=90.04 E-value=20 Score=37.27 Aligned_cols=215 Identities=9% Similarity=0.011 Sum_probs=103.0
Q ss_pred CCEEEEEceecC--CcEEEEEECCCCcEEeCCCCCC---Ccc-ceeEE--eeCCEEEEEeeecCCCCccceEEEEeCCCC
Q 012755 205 GTQLLVFGRELS--GFAIWMYSLIANCWSKCPQMNL---PRC-LFGSS--SLGEVAIVAGGTDKNGCILKSAELYNSELG 276 (457)
Q Consensus 205 ~~~lyv~GG~~~--~~~v~~yd~~t~~W~~l~~lp~---~r~-~~~~~--~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~ 276 (457)
|+.+|.+-.... ...+|+.+.....|+.+-+... ... ..... +-+++..++...... .....++++|..++
T Consensus 79 G~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G-~~~~~i~v~dl~tg 157 (695)
T 2bkl_A 79 NGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNA-ADEAVLHVIDVDSG 157 (695)
T ss_dssp TTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETT-CSCCEEEEEETTTC
T ss_pred CCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCC-CceEEEEEEECCCC
Confidence 555555432221 2457888877777777643221 111 11111 225665555443221 22468999999998
Q ss_pred cEEECCCCCCCCcceeEEEECCEEEEEeccCCCC-------CCCceEEEEECCCCceE--EcCCCCCCCCCCCCCCCCCC
Q 012755 277 TWETLPDMNLPRKLCSGFFMDGKFYIIGGMSSPT-------DPLTCGEEYNLETRTWK--RIENMYPSNVGTQSNPAMSS 347 (457)
Q Consensus 277 ~W~~~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~-------~~~~~~~~yd~~t~~W~--~~~~~~~~~~~~~~~~~~r~ 347 (457)
+......++.......+-.-+|+.++++..+... .....++.++..++.-. .+...+. ....
T Consensus 158 ~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~---------~~~~ 228 (695)
T 2bkl_A 158 EWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTG---------DPTT 228 (695)
T ss_dssp CBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCC---------CTTC
T ss_pred CCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCC---------CCEE
Confidence 8641111221111111222366655554433210 12345888888876532 2222111 0111
Q ss_pred CCEE-EEECCEEEEEecC----CCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEE
Q 012755 348 PPLV-AVVNNQLYSADQA----TNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLH 422 (457)
Q Consensus 348 ~~~~-~~~~g~ly~~gg~----~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~ 422 (457)
.... ..-+|+..++... ...++.+|..+..|+.+..-.... ...+..+|.+|+....... ...++
T Consensus 229 ~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~-------~~~~~~~g~l~~~s~~~~~---~~~l~ 298 (695)
T 2bkl_A 229 FLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAK-------YEVHAWKDRFYVLTDEGAP---RQRVF 298 (695)
T ss_dssp EEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCC-------EEEEEETTEEEEEECTTCT---TCEEE
T ss_pred EEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCce-------EEEEecCCcEEEEECCCCC---CCEEE
Confidence 1112 1225654444322 347888888777888875322211 1122245667666544322 23688
Q ss_pred EeeCCCCCCCCCCeeEecc
Q 012755 423 SWDPTDGNSGEAQWNELAV 441 (457)
Q Consensus 423 ~y~~~~~~w~~~~W~~l~~ 441 (457)
.+|.++. ...+|+.|..
T Consensus 299 ~~d~~~~--~~~~~~~l~~ 315 (695)
T 2bkl_A 299 EVDPAKP--ARASWKEIVP 315 (695)
T ss_dssp EEBTTBC--SGGGCEEEEC
T ss_pred EEeCCCC--CccCCeEEec
Confidence 8998763 2224777654
No 230
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=89.84 E-value=13 Score=35.01 Aligned_cols=182 Identities=13% Similarity=0.047 Sum_probs=103.2
Q ss_pred ccEEEEEe-cCccEEEEeCCCCcEEeCCC--CCCCccccCCCeeeEE--eCCEEEEEceecCCcEEEEEECCCCcEEeC-
Q 012755 160 EHWVYLAC-ILMPWEAFDPLRQRWMRLPR--MQCDECFTSADKESLA--VGTQLLVFGRELSGFAIWMYSLIANCWSKC- 233 (457)
Q Consensus 160 ~~~l~~~~-~~~~~~~ydp~~~~W~~l~~--~p~~~~~~~~~~~~~~--~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l- 233 (457)
+..||+.- ....++.+++.......+.. +..| ..+++ .++.||+.-. ....+.++++....-+.+
T Consensus 84 ~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p-------~glavd~~~g~ly~~d~--~~~~I~~~~~dG~~~~~l~ 154 (349)
T 3v64_C 84 RELVFWSDVTLDRILRANLNGSNVEEVVSTGLESP-------GGLAVDWVHDKLYWTDS--GTSRIEVANLDGAHRKVLL 154 (349)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC-------CEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEE
T ss_pred ccEEEEEeccCCceEEEecCCCCceEEEeCCCCCc-------cEEEEecCCCeEEEEcC--CCCeEEEEcCCCCceEEEE
Confidence 56677653 34667788887654433321 1111 11233 3788988643 245788898875543332
Q ss_pred -CCCCCCccceeEEe--eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE--CCEEEEEeccCC
Q 012755 234 -PQMNLPRCLFGSSS--LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM--DGKFYIIGGMSS 308 (457)
Q Consensus 234 -~~lp~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~GG~~~ 308 (457)
..+..|+ ++++ .++.||+.--.. ...++++|+....-+.+..-.. ..-.+.++- +++||+.-.
T Consensus 155 ~~~l~~P~---~iavdp~~g~ly~td~~~-----~~~I~r~~~dG~~~~~~~~~~~-~~PnGla~d~~~~~lY~aD~--- 222 (349)
T 3v64_C 155 WQSLEKPR---AIALHPMEGTIYWTDWGN-----TPRIEASSMDGSGRRIIADTHL-FWPNGLTIDYAGRRMYWVDA--- 222 (349)
T ss_dssp CTTCSCEE---EEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCEESCCSSC-SCEEEEEEETTTTEEEEEET---
T ss_pred eCCCCCcc---eEEEecCcCeEEEeccCC-----CCEEEEEeCCCCCcEEEEECCC-CCcceEEEeCCCCEEEEEEC---
Confidence 2233332 2333 378899874211 3679999987654444322111 111233443 789999842
Q ss_pred CCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCC
Q 012755 309 PTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQATNVVKKYNKTNN 376 (457)
Q Consensus 309 ~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~ 376 (457)
....++++|+....=..+.... .....++++.++.||+.....+.|.++|..++
T Consensus 223 ---~~~~I~~~~~dG~~~~~~~~~~-----------~~~P~giav~~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 223 ---KHHVIERANLDGSHRKAVISQG-----------LPHPFAITVFEDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp ---TTTEEEEEETTSCSCEEEECSS-----------CSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred ---CCCEEEEEeCCCCceEEEEeCC-----------CCCceEEEEECCEEEEecCCCCeEEEEEccCC
Confidence 2457899998754323222111 12234567789999999888889999996554
No 231
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=89.53 E-value=9.6 Score=32.92 Aligned_cols=146 Identities=14% Similarity=0.181 Sum_probs=78.4
Q ss_pred eEEeCCEEEEEceecCCcEEEEEECCCC--cEE--eC----CCCCCCccceeEEe-eCCEEEEEeeecCCCCccceEEEE
Q 012755 201 SLAVGTQLLVFGRELSGFAIWMYSLIAN--CWS--KC----PQMNLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELY 271 (457)
Q Consensus 201 ~~~~~~~lyv~GG~~~~~~v~~yd~~t~--~W~--~l----~~lp~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~y 271 (457)
++...+.+|+|-|. .+|+++.... ... .+ +.+|.. -..+... .++++|+|-| +..++|
T Consensus 12 i~~~~g~~yfFkg~----~~Wr~~~~~~~~~~~p~~Is~~w~glP~~-IDAa~~~~~~~~~yfFkG--------~~yw~~ 78 (195)
T 1itv_A 12 IAEIGNQLYLFKDG----KYWRFSEGRGSRPQGPFLIADKWPALPRK-LDSVFEEPLSKKLFFFSG--------RQVWVY 78 (195)
T ss_dssp EEEETTEEEEEETT----EEEEECCSSSCCCEEEEEHHHHCTTSCSS-CSEEEECTTTCCEEEEET--------TEEEEE
T ss_pred EEEeCCEEEEEECC----EEEEEECCccccCCCcEEhhhccCCCCCC-ccEEEEECCCCeEEEEeC--------CEEEEE
Confidence 45679999998653 5788876542 211 11 334432 1211111 2688999966 456777
Q ss_pred eCCCCcE-EECCC--CCCCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceE-----EcCCCCCCCCCCCC
Q 012755 272 NSELGTW-ETLPD--MNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWK-----RIENMYPSNVGTQS 341 (457)
Q Consensus 272 d~~t~~W-~~~~~--~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~-----~~~~~~~~~~~~~~ 341 (457)
+..+..- +.+.. +|.......+|+. +|++|++-| +..+.||..+++=. .+....+ |.
T Consensus 79 ~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg--------~~ywr~d~~~~~~~~gyPr~i~~~w~---Gv-- 145 (195)
T 1itv_A 79 TGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG--------RRLWRFDVKAQMVDPRSASEVDRMFP---GV-- 145 (195)
T ss_dssp ETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET--------TEEEEEETTTTEECGGGCEEHHHHST---TS--
T ss_pred cCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC--------CEEEEEeCCcccccCCCccChhhcCC---CC--
Confidence 6542111 11211 2221112333333 689999965 35688998765311 1111111 00
Q ss_pred CCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCc
Q 012755 342 NPAMSSPPLVAVVNNQLYSADQATNVVKKYNKTNNS 377 (457)
Q Consensus 342 ~~~~r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~~ 377 (457)
+....++...+|.+|.+-| +..+.||..+..
T Consensus 146 ---p~~idaa~~~~g~~Yffkg--~~y~~~~~~~~~ 176 (195)
T 1itv_A 146 ---PLDTHDVFQFREKAYFCQD--RFYWRVSSRSEL 176 (195)
T ss_dssp ---CSSCSEEEEETTEEEEEET--TEEEEEECCTTC
T ss_pred ---CCCCCEEEEeCCeEEEEeC--CEEEEEECCccE
Confidence 1223456667899999976 579999987764
No 232
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=89.35 E-value=13 Score=34.05 Aligned_cols=222 Identities=7% Similarity=0.046 Sum_probs=103.4
Q ss_pred EEEEEecCccEEEEeC-CCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCc-------EEeC
Q 012755 162 WVYLACILMPWEAFDP-LRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANC-------WSKC 233 (457)
Q Consensus 162 ~l~~~~~~~~~~~ydp-~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~-------W~~l 233 (457)
.++..+....+..||. .+.....+...+....- ..+....+.+++.|+. ...+.+||..+.. .+.+
T Consensus 71 ~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v----~~l~~~~~~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~~~ 144 (342)
T 1yfq_A 71 QIYVGTVQGEILKVDLIGSPSFQALTNNEANLGI----CRICKYGDDKLIAASW--DGLIEVIDPRNYGDGVIAVKNLNS 144 (342)
T ss_dssp EEEEEETTSCEEEECSSSSSSEEECBSCCCCSCE----EEEEEETTTEEEEEET--TSEEEEECHHHHTTBCEEEEESCS
T ss_pred EEEEEcCCCeEEEEEeccCCceEeccccCCCCce----EEEEeCCCCEEEEEcC--CCeEEEEcccccccccccccCCee
Confidence 4555555677888998 77766555431111000 0112221444455543 3467888876400 2222
Q ss_pred CCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCC-Cc--EEECCCCCCCCcceeEEEE--CCEEEEEeccCC
Q 012755 234 PQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSEL-GT--WETLPDMNLPRKLCSGFFM--DGKFYIIGGMSS 308 (457)
Q Consensus 234 ~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t-~~--W~~~~~~p~~r~~~~~~~~--~g~iyv~GG~~~ 308 (457)
..+..+..-.+++...+. ++.|+.+ ..+.+||..+ .. ...... +....-.+++.. +++.++.|+.+
T Consensus 145 ~~~~~~~~v~~~~~~~~~-l~~~~~d------~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~~l~~~~~d- 215 (342)
T 1yfq_A 145 NNTKVKNKIFTMDTNSSR-LIVGMNN------SQVQWFRLPLCEDDNGTIEES-GLKYQIRDVALLPKEQEGYACSSID- 215 (342)
T ss_dssp SSSSSCCCEEEEEECSSE-EEEEEST------TEEEEEESSCCTTCCCEEEEC-SCSSCEEEEEECSGGGCEEEEEETT-
T ss_pred eEEeeCCceEEEEecCCc-EEEEeCC------CeEEEEECCccccccceeeec-CCCCceeEEEECCCCCCEEEEEecC-
Confidence 223322223334444555 4455432 4688899887 33 221111 111111222333 46677776643
Q ss_pred CCCCCceEEEEECCCC--------ceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcE
Q 012755 309 PTDPLTCGEEYNLETR--------TWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSW 378 (457)
Q Consensus 309 ~~~~~~~~~~yd~~t~--------~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W 378 (457)
..+..||.... .......... . ...........+.+ ++++++.|+..+.|..||..+.+-
T Consensus 216 -----g~i~i~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~ 285 (342)
T 1yfq_A 216 -----GRVAVEFFDDQGDDYNSSKRFAFRCHRLN-L----KDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK 285 (342)
T ss_dssp -----SEEEEEECCTTCCSTTCTTCEEEECCCCC-T----TCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE
T ss_pred -----CcEEEEEEcCCCcccccccceeeeccccc-c----cccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhH
Confidence 24555555443 1111111000 0 00000112222333 677777787788999999987754
Q ss_pred EEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCC
Q 012755 379 TVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHREL 414 (457)
Q Consensus 379 ~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~ 414 (457)
. ..+.... ...-..+. .++++++.|+.++.
T Consensus 286 ~--~~~~~~h---~~~v~~~~-~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 286 I--KNFAKFN---EDSVVKIA-CSDNILCLATSDDT 315 (342)
T ss_dssp E--EECCCCS---SSEEEEEE-ECSSEEEEEEECTH
T ss_pred h--hhhhccc---CCCceEec-CCCCeEEEEecCCc
Confidence 3 2232210 01112344 77778888877653
No 233
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=89.23 E-value=2.5 Score=39.13 Aligned_cols=68 Identities=10% Similarity=-0.009 Sum_probs=40.0
Q ss_pred eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE-CC-EEEEEeccCCCCCCCceEEEEECCCCc
Q 012755 248 LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM-DG-KFYIIGGMSSPTDPLTCGEEYNLETRT 325 (457)
Q Consensus 248 ~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~-~g-~iyv~GG~~~~~~~~~~~~~yd~~t~~ 325 (457)
.++++|+.++.+ ..+.++|+.+++....-+.+........+.. +| .+|+.+.. ...+.+||+.+++
T Consensus 9 ~~~~~~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~------~~~i~~~d~~t~~ 76 (349)
T 1jmx_B 9 AGHEYMIVTNYP------NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH------YGDIYGIDLDTCK 76 (349)
T ss_dssp TTCEEEEEEETT------TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT------TTEEEEEETTTTE
T ss_pred CCCEEEEEeCCC------CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC------CCcEEEEeCCCCc
Confidence 367788877642 5789999998875432222221012223322 45 57776532 3568999998876
Q ss_pred eE
Q 012755 326 WK 327 (457)
Q Consensus 326 W~ 327 (457)
-.
T Consensus 77 ~~ 78 (349)
T 1jmx_B 77 NT 78 (349)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 234
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=88.99 E-value=25 Score=36.96 Aligned_cols=190 Identities=9% Similarity=0.023 Sum_probs=98.4
Q ss_pred ccEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeE-EeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCC
Q 012755 160 EHWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESL-AVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNL 238 (457)
Q Consensus 160 ~~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~-~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~ 238 (457)
++.+++.. ..-+..||..+ +........ ...... ..++ ..++.|++.. ...+.+||+.++++...... .
T Consensus 32 ~G~lWigT-~~GL~ryDG~~--~~~~~~~~~-~~~~~i-~~i~~d~~g~lWigT----~~Gl~~yd~~~~~f~~~~~~-~ 101 (758)
T 3ott_A 32 EGLIWIGS-NKGLFSYDGYS--TQQHFTYGE-NNNTRI-YCGVIIDNTYLYMGT----DNGILVYNYRADRYEQPETD-F 101 (758)
T ss_dssp TSCEEEEE-SSCEEEECSSC--EEECSCTTS-TTSSCE-EEEEEETTTEEEEEE----TTEEEEEETTTTEECCCSCC-C
T ss_pred CCCEEEEE-CCCccccCCCc--eEEEEccCC-CCCceE-EEEEEcCCCcEEEEe----CCCeEEEeCCCCEEECcccC-C
Confidence 45566543 56678898633 333221111 001111 0112 2356777742 24689999999988652111 1
Q ss_pred CccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCC----CCCCCcceeEEEE-CCEEEEEeccCCCCCCC
Q 012755 239 PRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPD----MNLPRKLCSGFFM-DGKFYIIGGMSSPTDPL 313 (457)
Q Consensus 239 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~----~p~~r~~~~~~~~-~g~iyv~GG~~~~~~~~ 313 (457)
+..-.++..-++.|++.. ...+.+||+.+++.+.... ++.. .-.+...- +|.|++.. .
T Consensus 102 ~~~i~~i~~~~g~lWigt--------~~Gl~~~~~~~~~~~~~~~~~~~l~~~-~i~~i~~d~~g~lWigt--------~ 164 (758)
T 3ott_A 102 PTDVRTMALQGDTLWLGA--------LNGLYTYQLQSRKLTSFDTRRNGLPNN-TIYSIIRTKDNQIYVGT--------Y 164 (758)
T ss_dssp CSCEEEEEEETTEEEEEE--------TTEEEEEETTTCCEEEECHHHHCCSCS-CEEEEEECTTCCEEEEE--------T
T ss_pred CceEEEEEecCCcEEEEc--------CCcceeEeCCCCeEEEeccCCCCcCCC-eEEEEEEcCCCCEEEEe--------C
Confidence 111122333477888742 1257899999998876621 2211 11122222 67788742 1
Q ss_pred ceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-C-CEEEEEecCCCeEEEEECCCCcEEEeccC
Q 012755 314 TCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV-N-NQLYSADQATNVVKKYNKTNNSWTVVKRL 384 (457)
Q Consensus 314 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~-g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~ 384 (457)
..+.+||+.++++..+..... . ........++..- + +.|++-. .+.+..||+.+++++....+
T Consensus 165 ~Gl~~~~~~~~~~~~~~~~~~-----~-~~~~~~i~~i~~d~~~~~lWigt--~~Gl~~~~~~~~~~~~~~~l 229 (758)
T 3ott_A 165 NGLCRYIPSNGKFEGIPLPVH-----S-SQSNLFVNSLLEDTTRQCVWIGT--EGYLFQYFPSTGQIKQTEAF 229 (758)
T ss_dssp TEEEEEETTTTEEEEECCCCC-----T-TCSSCCEEEEEEETTTTEEEEEE--EEEEEEEETTTTEEEEEEEE
T ss_pred CCHhhCccCCCceEEecCCCc-----c-ccccceeEEEEEECCCCEEEEEE--CCCCeEEcCCCCeEEeccCC
Confidence 357889999988876542111 0 0000111122232 2 3567643 24799999999988766543
No 235
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=88.92 E-value=11 Score=36.14 Aligned_cols=106 Identities=9% Similarity=0.054 Sum_probs=58.8
Q ss_pred CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECC
Q 012755 297 DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKT 374 (457)
Q Consensus 297 ~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~ 374 (457)
++.+.+.|+.+ ..+..||+.+.+-...-..+. .......+.+ ++.+++.|+..+.+..||..
T Consensus 181 ~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~----------h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 244 (437)
T 3gre_A 181 EKSLLVALTNL------SRVIIFDIRTLERLQIIENSP----------RHGAVSSICIDEECCVLILGTTRGIIDIWDIR 244 (437)
T ss_dssp SCEEEEEEETT------SEEEEEETTTCCEEEEEECCG----------GGCCEEEEEECTTSCEEEEEETTSCEEEEETT
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCeeeEEEccCC----------CCCceEEEEECCCCCEEEEEcCCCeEEEEEcC
Confidence 46666766543 468889998865432211110 1112223333 67788888888899999998
Q ss_pred CCcEEEeccCCCccCCCCcceEEEEE-----eCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 375 NNSWTVVKRLPVRANSFNGWGLAFKA-----CGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 375 ~~~W~~v~~~p~~~~~~~~~~~~~~~-----~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
+.+....-..+... .-..+.. -++.+++.|+.++ .+.+||..+.
T Consensus 245 ~~~~~~~~~~~~~~-----~v~~~~~~~~~s~~~~~l~s~~~dg------~i~iwd~~~~ 293 (437)
T 3gre_A 245 FNVLIRSWSFGDHA-----PITHVEVCQFYGKNSVIVVGGSSKT------FLTIWNFVKG 293 (437)
T ss_dssp TTEEEEEEBCTTCE-----EEEEEEECTTTCTTEEEEEEESTTE------EEEEEETTTT
T ss_pred CccEEEEEecCCCC-----ceEEEEeccccCCCccEEEEEcCCC------cEEEEEcCCC
Confidence 86543322211111 0011111 1356777776653 6888888763
No 236
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=88.72 E-value=18 Score=35.02 Aligned_cols=151 Identities=10% Similarity=-0.036 Sum_probs=77.2
Q ss_pred CEEEEEceecCCcEEEEEECCCCcEEe--CCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCC
Q 012755 206 TQLLVFGRELSGFAIWMYSLIANCWSK--CPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPD 283 (457)
Q Consensus 206 ~~lyv~GG~~~~~~v~~yd~~t~~W~~--l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~ 283 (457)
+.+++.|+.. ..+.+||..+++... +..-..+ . .+++..++.+++.|+.+ ..+.+||..+++....-.
T Consensus 210 ~~~l~s~~~d--~~i~vwd~~~~~~~~~~~~~h~~~-v-~~~~~sd~~~l~s~~~d------~~v~vwd~~~~~~~~~~~ 279 (450)
T 2vdu_B 210 HQFIITSDRD--EHIKISHYPQCFIVDKWLFGHKHF-V-SSICCGKDYLLLSAGGD------DKIFAWDWKTGKNLSTFD 279 (450)
T ss_dssp CEEEEEEETT--SCEEEEEESCTTCEEEECCCCSSC-E-EEEEECSTTEEEEEESS------SEEEEEETTTCCEEEEEE
T ss_pred CcEEEEEcCC--CcEEEEECCCCceeeeeecCCCCc-e-EEEEECCCCEEEEEeCC------CeEEEEECCCCcEeeeec
Confidence 7777777654 468888887665332 1111111 1 12222167777777643 478889998877432211
Q ss_pred C------------------------CCCCcceeEEEE-CCEEEEEeccCCCCCCCceEEEEEC--CC-CceEEcCCCCCC
Q 012755 284 M------------------------NLPRKLCSGFFM-DGKFYIIGGMSSPTDPLTCGEEYNL--ET-RTWKRIENMYPS 335 (457)
Q Consensus 284 ~------------------------p~~r~~~~~~~~-~g~iyv~GG~~~~~~~~~~~~~yd~--~t-~~W~~~~~~~~~ 335 (457)
. ........++.. +++..++++. ....+.+||. .+ +++..+..+..
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~-----~d~~i~iw~~~~~~~~~l~~~~~~~~- 353 (450)
T 2vdu_B 280 YNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVE-----ATKCIIILEMSEKQKGDLALKQIITF- 353 (450)
T ss_dssp CHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEET-----TCSEEEEEEECSSSTTCEEEEEEEEC-
T ss_pred chhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEEC-----CCCeEEEEEeccCCCCceeeccEecc-
Confidence 0 000111112222 3444333331 1246788887 33 45565554433
Q ss_pred CCCCCCCCCCCCCCEEEEECCEEEEEecCC-------C--eEEEEECCCCcEEEe
Q 012755 336 NVGTQSNPAMSSPPLVAVVNNQLYSADQAT-------N--VVKKYNKTNNSWTVV 381 (457)
Q Consensus 336 ~~~~~~~~~~r~~~~~~~~~g~ly~~gg~~-------~--~v~~Yd~~~~~W~~v 381 (457)
......++...+.+++..+.. + .++.++.+++.|+..
T Consensus 354 ---------~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~ 399 (450)
T 2vdu_B 354 ---------PYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSFVVN 399 (450)
T ss_dssp ---------SSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEEEEC
T ss_pred ---------CCceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeEEEc
Confidence 212233445567777765432 1 677788888888643
No 237
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=88.61 E-value=27 Score=36.82 Aligned_cols=251 Identities=15% Similarity=0.142 Sum_probs=124.9
Q ss_pred ccEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEe----CCEEEEEceecC------CcEEEEEECCCCc
Q 012755 160 EHWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAV----GTQLLVFGRELS------GFAIWMYSLIANC 229 (457)
Q Consensus 160 ~~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~----~~~lyv~GG~~~------~~~v~~yd~~t~~ 229 (457)
.+.+|+......++..+....+|..+...+............+++ .+.||+..+... ...+++-.-.-++
T Consensus 35 ~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~T 114 (737)
T 2cn3_A 35 KDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGET 114 (737)
T ss_dssp TTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSSS
T ss_pred CCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCccEEEeCCCCCC
Confidence 356777655667888888889999986533211101111112333 357887654211 2345555555678
Q ss_pred EEeCCC-CCC-----Cc-cceeEEee---CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCC-----------
Q 012755 230 WSKCPQ-MNL-----PR-CLFGSSSL---GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPR----------- 288 (457)
Q Consensus 230 W~~l~~-lp~-----~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r----------- 288 (457)
|+++.. .+. .+ ..+.+++- .+.||+... .+ ..+++=+-.-.+|+.+..+|..-
T Consensus 115 W~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~-~g-----~gl~~S~DgG~tW~~~~~~~~~~~~~~~p~~~~~ 188 (737)
T 2cn3_A 115 WEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR-CG-----NGLWRSTDYGVTWSKVESFPNPGTYIYDPNFDYT 188 (737)
T ss_dssp CEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS-TT-----CCEEEESSTTSSCEECTTCCCCCCCBSCTTSTTT
T ss_pred cccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec-cC-----CcEEEeCCCCcceecccCCCCCcccccCcccccc
Confidence 988642 110 12 12334332 356766421 10 12333222345799987655321
Q ss_pred ---cceeEEEEC----------CEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-
Q 012755 289 ---KLCSGFFMD----------GKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV- 354 (457)
Q Consensus 289 ---~~~~~~~~~----------g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~- 354 (457)
.....+.++ +.||+.-+... ..+++=.-.-.+|+.+..++. ....+.++..
T Consensus 189 ~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~-----~~v~~S~DgG~tW~~~~~~p~----------~~~~~~~~~~~ 253 (737)
T 2cn3_A 189 KDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKN-----ESIYRSTDGGVTWKAVPGQPK----------GLLPHHGVLAS 253 (737)
T ss_dssp CSBCCEEEEEECGGGSCTTSCCSCEEEEESCSS-----CCEEEESSTTSCCEECTTCCC----------SSEEEEEEECT
T ss_pred cCCCCEEEEEcCCCCcccCCCCCEEEEEecCCC-----ccEEEEcCCCCceEECCCCCC----------cccceEEEECC
Confidence 011223332 26777432110 112222223457999885443 2222222222
Q ss_pred CCEEEEEec---------CCCeEEEEECCCCcEEEeccCCCccCCCCcceEE-EEEe---CCEEEEEcCcCCCCCceEEE
Q 012755 355 NNQLYSADQ---------ATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLA-FKAC---GNSLLVIGGHRELQGEIIVL 421 (457)
Q Consensus 355 ~g~ly~~gg---------~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~-~~~~---~g~lyv~GG~~~~~~~~~~v 421 (457)
++.+|+..+ ....+++++....+|+.+...|...... .++.+ +++. .+.||+.+...... ..
T Consensus 254 ~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~~~~~~~~-~~~~~~i~v~p~~~~~ly~~~~~~~~~----~~ 328 (737)
T 2cn3_A 254 NGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPIPYSSSDN-RFCFAGLAVDRQNPDIIMVTSMNAWWP----DE 328 (737)
T ss_dssp TSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSSCTTSTTC-CSEEEEEEECTTCTTCEEEEEECCCSS----CC
T ss_pred CCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccCCCCCCccc-ccccccEEEcCCCCCEEEEEecccCCC----Cc
Confidence 788998642 3457999999999999998766431000 12222 3222 36788876432111 12
Q ss_pred EEeeCCCCCCCCCCeeEe
Q 012755 422 HSWDPTDGNSGEAQWNEL 439 (457)
Q Consensus 422 ~~y~~~~~~w~~~~W~~l 439 (457)
.+|...+ +..+|+.+
T Consensus 329 ~l~~S~D---gG~tW~~~ 343 (737)
T 2cn3_A 329 YIFRSTD---GGATWKNI 343 (737)
T ss_dssp CEEEESS---TTSSCEES
T ss_pred cEEEeCC---CCccccch
Confidence 2344433 44578877
No 238
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=88.29 E-value=0.091 Score=54.11 Aligned_cols=34 Identities=15% Similarity=0.207 Sum_probs=31.5
Q ss_pred CCCcHHHHhhhceec-cccccCcccccChhhhhhh
Q 012755 111 PGLHDDATLDILAWS-SRSDYPTLSCLNRKFKSLI 144 (457)
Q Consensus 111 ~~LPddl~~~iLarl-p~~~~~~l~~v~k~w~~li 144 (457)
..||||++..|+++| |.++..+++.|||+|+.+.
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~~ 48 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKID 48 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHhh
Confidence 479999999999999 8999999999999999874
No 239
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=87.92 E-value=10 Score=34.68 Aligned_cols=157 Identities=8% Similarity=-0.055 Sum_probs=77.4
Q ss_pred ccEEEEEec-CccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEE----cee-----------cCCcEEEEE
Q 012755 160 EHWVYLACI-LMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVF----GRE-----------LSGFAIWMY 223 (457)
Q Consensus 160 ~~~l~~~~~-~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~----GG~-----------~~~~~v~~y 223 (457)
++.+|++.. ...+..||+. .+...+................+..++.||+. |-. .....+++|
T Consensus 96 dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~ 174 (305)
T 3dr2_A 96 QQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRL 174 (305)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEE
T ss_pred CCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEE
Confidence 455666643 3578889986 55655432211111111111123347788885 321 113579999
Q ss_pred ECCCCcEEeCCCCCCCccceeEEee-C-CEEEEEeeecCCCCccceEEEEeCCCCcEEE---CCCCCCCCcceeEEEECC
Q 012755 224 SLIANCWSKCPQMNLPRCLFGSSSL-G-EVAIVAGGTDKNGCILKSAELYNSELGTWET---LPDMNLPRKLCSGFFMDG 298 (457)
Q Consensus 224 d~~t~~W~~l~~lp~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~---~~~~p~~r~~~~~~~~~g 298 (457)
|+.+++.+.+..+ .. ..+++.- + ..+|+....... .....+++||...+.... ....+......-..--+|
T Consensus 175 d~~~g~~~~~~~~--~~-p~gl~~spdg~~lyv~~~~~~~-~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G 250 (305)
T 3dr2_A 175 PPDGSPLQRMADL--DH-PNGLAFSPDEQTLYVSQTPEQG-HGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGG 250 (305)
T ss_dssp CSSSCCCEEEEEE--SS-EEEEEECTTSSEEEEEECCC----CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTS
T ss_pred cCCCCcEEEEecC--CC-CcceEEcCCCCEEEEEecCCcC-CCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCC
Confidence 9988887765311 11 1223322 3 358887432110 112578889877654211 111111111111122367
Q ss_pred EEEEEeccCCCCCCCceEEEEECCCCceEEc
Q 012755 299 KFYIIGGMSSPTDPLTCGEEYNLETRTWKRI 329 (457)
Q Consensus 299 ~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~ 329 (457)
.||+.. ...+.+||+....-..+
T Consensus 251 ~lwv~~--------~~gv~~~~~~g~~~~~~ 273 (305)
T 3dr2_A 251 WLWSSS--------GTGVCVFDSDGQLLGHI 273 (305)
T ss_dssp CEEECC--------SSEEEEECTTSCEEEEE
T ss_pred CEEEec--------CCcEEEECCCCCEEEEE
Confidence 788753 23589999976655544
No 240
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=87.78 E-value=11 Score=34.83 Aligned_cols=178 Identities=7% Similarity=-0.017 Sum_probs=87.8
Q ss_pred ccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCC-EEEEEceec--CCcEEEEEECCCCcEEeCCCCCCCccceeEE
Q 012755 170 MPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGT-QLLVFGREL--SGFAIWMYSLIANCWSKCPQMNLPRCLFGSS 246 (457)
Q Consensus 170 ~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~-~lyv~GG~~--~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~ 246 (457)
..++.+|..+.+-..+. .........+| .|+...... ....++++|..+++.+.+...+. ....+
T Consensus 43 ~~l~~~d~~~~~~~~l~---------~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~---~~~~~ 110 (347)
T 2gop_A 43 NTIVIENLKNNARRFIE---------NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN---IRSLE 110 (347)
T ss_dssp EEEEEEETTTCCEEEEE---------SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE---EEEEE
T ss_pred ceEEEEeCCCCceEEcc---------cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC---cccee
Confidence 34566777766554441 00001233344 344333222 23569999999888776643332 11222
Q ss_pred e-eCCEEEEEeeecC----------------CC-----CccceEEEEeCCCCcE-EECCCCCCCCcceeEEEE-CCEEEE
Q 012755 247 S-LGEVAIVAGGTDK----------------NG-----CILKSAELYNSELGTW-ETLPDMNLPRKLCSGFFM-DGKFYI 302 (457)
Q Consensus 247 ~-~~~~iyv~GG~~~----------------~~-----~~~~~v~~yd~~t~~W-~~~~~~p~~r~~~~~~~~-~g~iyv 302 (457)
. -+++.+++..... ++ .....++++|..+++. +.+.. + .....+.. +| +++
T Consensus 111 wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg-~~~ 185 (347)
T 2gop_A 111 WNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDK-IVV 185 (347)
T ss_dssp ECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E---TTCEEEEETTE-EEE
T ss_pred ECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C---CcccccCCCCe-EEE
Confidence 2 2444333333210 00 1135789999999887 66544 2 22233333 45 555
Q ss_pred EeccCCCCC--C-CceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCE-EEEEecC-------CCeEEEE
Q 012755 303 IGGMSSPTD--P-LTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQ-LYSADQA-------TNVVKKY 371 (457)
Q Consensus 303 ~GG~~~~~~--~-~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~-ly~~gg~-------~~~v~~Y 371 (457)
.+....... . ...++.+| ++++..+... . . .....-+|+ |++.+.. ...++.+
T Consensus 186 ~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-~----------~---~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~ 249 (347)
T 2gop_A 186 NVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-V----------S---FYAVDSDGERILLYGKPEKKYMSEHNKLYIY 249 (347)
T ss_dssp EEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-E----------S---EEEEEECSSCEEEEECCSSSCCCSSCEEEEE
T ss_pred EEecccccccccccccEEEeC--CCceEEeccC-c----------c---eeeECCCCCEEEEEEccccCCccccceEEEE
Confidence 553322111 1 45678888 6677665431 1 1 111244665 4444321 3579999
Q ss_pred ECCCCcEEEec
Q 012755 372 NKTNNSWTVVK 382 (457)
Q Consensus 372 d~~~~~W~~v~ 382 (457)
| +++++.+.
T Consensus 250 d--~~~~~~l~ 258 (347)
T 2gop_A 250 D--GKEVMGIL 258 (347)
T ss_dssp C--SSCEEESS
T ss_pred C--CCceEecc
Confidence 8 66676654
No 241
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=87.35 E-value=18 Score=33.45 Aligned_cols=179 Identities=11% Similarity=0.069 Sum_probs=85.0
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEE--EC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWE--TL 281 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~--~~ 281 (457)
++.+++.|+.. ..+.+||..+++-.............+++. -++.+++.|+.+ ..+.+||..+++-. .+
T Consensus 138 ~~~~l~s~s~d--g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d------g~i~iwd~~~~~~~~~~~ 209 (343)
T 3lrv_A 138 NTEYFIWADNR--GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD------GILDVYNLSSPDQASSRF 209 (343)
T ss_dssp -CCEEEEEETT--CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT------SCEEEEESSCTTSCCEEC
T ss_pred CCCEEEEEeCC--CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC------CEEEEEECCCCCCCccEE
Confidence 45566666643 358889998876643322121211222222 266777777643 46889999887632 22
Q ss_pred CCCCCCCcceeEEEE-CCEEEEEeccCCCCCCCceEEEEECCCCceE-EcCCCCCCCCCCCCCCCCCCCCEEEEE--CCE
Q 012755 282 PDMNLPRKLCSGFFM-DGKFYIIGGMSSPTDPLTCGEEYNLETRTWK-RIENMYPSNVGTQSNPAMSSPPLVAVV--NNQ 357 (457)
Q Consensus 282 ~~~p~~r~~~~~~~~-~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~-~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ 357 (457)
.. .....-.+++.. ++...+.|+ + ..+..||+.+..-. .+..... .........+.. +|+
T Consensus 210 ~~-~h~~~v~~l~fs~~g~~l~s~~-~------~~v~iwd~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~g~ 273 (343)
T 3lrv_A 210 PV-DEEAKIKEVKFADNGYWMVVEC-D------QTVVCFDLRKDVGTLAYPTYTI--------PEFKTGTVTYDIDDSGK 273 (343)
T ss_dssp CC-CTTSCEEEEEECTTSSEEEEEE-S------SBEEEEETTSSTTCBSSCCCBC-------------CCEEEEECTTSS
T ss_pred ec-cCCCCEEEEEEeCCCCEEEEEe-C------CeEEEEEcCCCCcceeeccccc--------ccccccceEEEECCCCC
Confidence 11 011111122222 555555554 2 15888998875421 1111100 000001012333 566
Q ss_pred EEEEecC-CCeEEEEEC--CCCcEEE----eccCCCccCCCCcceEEEEEeCCEEEEEc
Q 012755 358 LYSADQA-TNVVKKYNK--TNNSWTV----VKRLPVRANSFNGWGLAFKACGNSLLVIG 409 (457)
Q Consensus 358 ly~~gg~-~~~v~~Yd~--~~~~W~~----v~~~p~~~~~~~~~~~~~~~~~g~lyv~G 409 (457)
.++.++. .+.+..|+. ....|.. .-..+.... ....+.....++.+.++-
T Consensus 274 ~l~~~s~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~d~~~~~~~ 330 (343)
T 3lrv_A 274 NMIAYSNESNSLTIYKFDKKTKNWTKDEESALCLQSDTA--DFTDMDVVCGDGGIAAIL 330 (343)
T ss_dssp EEEEEETTTTEEEEEEECTTTCSEEEEEEEECCC----C--CCCEEEEEEETTEEEEEE
T ss_pred EEEEecCCCCcEEEEEEcccccceEecCceeEecCcccc--ccceeEEEecCCceEEEE
Confidence 6666544 667777766 5567987 212221000 122344455677766654
No 242
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=87.16 E-value=34 Score=36.41 Aligned_cols=146 Identities=9% Similarity=-0.023 Sum_probs=87.6
Q ss_pred eCCEEEEEceecCCcEEEEEECCCCcEEeCC--CCCCCccceeEEe--eCCEEEEEeeecCCCCccceEEEEeCCCCcEE
Q 012755 204 VGTQLLVFGRELSGFAIWMYSLIANCWSKCP--QMNLPRCLFGSSS--LGEVAIVAGGTDKNGCILKSAELYNSELGTWE 279 (457)
Q Consensus 204 ~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~--~lp~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~ 279 (457)
.++.||+.-. ....|.++++....-+.+. .+..|+ ++++ .++.||+.--. ....++++++....=+
T Consensus 481 ~~~~LY~tD~--~~~~I~v~~ldG~~~~~l~~~~l~~P~---gIaVDp~~g~LYwtD~g-----~~~~I~~~~~dG~~~~ 550 (791)
T 3m0c_C 481 IHSNIYWTDS--VLGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWG-----TPAKIKKGGLNGVDIY 550 (791)
T ss_dssp TTTEEEEEET--TTTEEEEEETTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEECS-----SSCEEEEEETTSCCEE
T ss_pred cCCcEEEEec--CCCeEEEEeCCCCeEEEEEeCCCCCcc---eEEEecCCCCEEEecCC-----CCCeEEEEecCCCceE
Confidence 3678998753 3457899998866554442 333333 3343 36899997411 1257888888765444
Q ss_pred ECCCCCCCCcce-eEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECC
Q 012755 280 TLPDMNLPRKLC-SGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNN 356 (457)
Q Consensus 280 ~~~~~p~~r~~~-~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g 356 (457)
.+..- ..... ++++- +++||+.-. ....|+++|+....=..+..... ......++++.++
T Consensus 551 ~lv~~--~l~~P~GLavD~~~~~LYwaD~------~~~~I~~~d~dG~~~~~v~~~~~---------~l~~P~glav~~~ 613 (791)
T 3m0c_C 551 SLVTE--NIQWPNGITLDLLSGRLYWVDS------KLHSISSIDVNGGNRKTILEDEK---------RLAHPFSLAVFED 613 (791)
T ss_dssp EEECS--SCSCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCSCEEEEECTT---------TTSSEEEEEEETT
T ss_pred EEEeC--CCCCceEEEEecCCCeEEEEeC------CCCcEEEEecCCCceEEEecCCC---------ccCCCCEEEEeCC
Confidence 33221 11122 23333 689999842 24678999987654333321100 0123346777899
Q ss_pred EEEEEecCCCeEEEEECCCC
Q 012755 357 QLYSADQATNVVKKYNKTNN 376 (457)
Q Consensus 357 ~ly~~gg~~~~v~~Yd~~~~ 376 (457)
+||+.....+.|++.|..++
T Consensus 614 ~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 614 KVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp EEEEEETTTTEEEEEETTTC
T ss_pred EEEEEECCCCEEEEEeCCCC
Confidence 99999988889999987554
No 243
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=87.01 E-value=17 Score=35.00 Aligned_cols=143 Identities=6% Similarity=0.028 Sum_probs=68.6
Q ss_pred EEEEceecCCcEEEEEECCCCc---EEe--CCCC-CCCccceeEEee--CCEEEEEeeecCCCCccceEEEEeCCCCc-E
Q 012755 208 LLVFGRELSGFAIWMYSLIANC---WSK--CPQM-NLPRCLFGSSSL--GEVAIVAGGTDKNGCILKSAELYNSELGT-W 278 (457)
Q Consensus 208 lyv~GG~~~~~~v~~yd~~t~~---W~~--l~~l-p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~yd~~t~~-W 278 (457)
+++.|+.. ..+.+||..+.. +.. ...+ .....-.+++.. ++.+++.|+.+ ..+.+||..+.. .
T Consensus 196 ~l~s~~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d------g~i~i~d~~~~~~~ 267 (430)
T 2xyi_A 196 YLLSASDD--HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD------QKLMIWDTRNNNTS 267 (430)
T ss_dssp EEEEECTT--SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT------SEEEEEETTCSCSS
T ss_pred eEEEEeCC--CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC------CeEEEEECCCCCCC
Confidence 55666543 358888887621 211 1111 111112222222 56677776643 468899988652 1
Q ss_pred EECCCCCCCCcceeEEEE--CC-EEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-
Q 012755 279 ETLPDMNLPRKLCSGFFM--DG-KFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV- 354 (457)
Q Consensus 279 ~~~~~~p~~r~~~~~~~~--~g-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~- 354 (457)
..+..+.........+.+ ++ .+++.|+.+ ..+.+||..+.. ..+..+.. .......+..
T Consensus 268 ~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d------g~v~vwd~~~~~-~~~~~~~~----------h~~~v~~i~~s 330 (430)
T 2xyi_A 268 KPSHTVDAHTAEVNCLSFNPYSEFILATGSAD------KTVALWDLRNLK-LKLHSFES----------HKDEIFQVQWS 330 (430)
T ss_dssp SCSEEEECCSSCEEEEEECSSCTTEEEEEETT------SEEEEEETTCTT-SCSEEEEC----------CSSCEEEEEEC
T ss_pred cceeEeecCCCCeEEEEeCCCCCCEEEEEeCC------CeEEEEeCCCCC-CCeEEeec----------CCCCEEEEEEC
Confidence 111011111111222233 23 377777643 468889987632 01111111 1111222223
Q ss_pred -CC-EEEEEecCCCeEEEEECCC
Q 012755 355 -NN-QLYSADQATNVVKKYNKTN 375 (457)
Q Consensus 355 -~g-~ly~~gg~~~~v~~Yd~~~ 375 (457)
++ .+++.++..+.|.+||...
T Consensus 331 p~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 331 PHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp SSCTTEEEEEETTSCCEEEEGGG
T ss_pred CCCCCEEEEEeCCCcEEEEeCCC
Confidence 33 5788887788899999876
No 244
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=87.00 E-value=31 Score=35.69 Aligned_cols=146 Identities=13% Similarity=0.092 Sum_probs=74.8
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPD 283 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~ 283 (457)
++.+++.|+.. ..+.+||..+++-...-. .+...-.+++. -++..++.|+.+ ..+.++|.....=..+..
T Consensus 441 ~g~~l~sgs~D--g~v~vwd~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~D------~~i~iwd~~~~~~~~~~~ 511 (694)
T 3dm0_A 441 DGQFALSGSWD--GELRLWDLAAGVSTRRFV-GHTKDVLSVAFSLDNRQIVSASRD------RTIKLWNTLGECKYTISE 511 (694)
T ss_dssp TSSEEEEEETT--SEEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSSCEEEEETT------SCEEEECTTSCEEEEECS
T ss_pred CCCEEEEEeCC--CcEEEEECCCCcceeEEe-CCCCCEEEEEEeCCCCEEEEEeCC------CEEEEEECCCCcceeecc
Confidence 56666666543 468889988765432100 01111112222 255566666643 357778876543222221
Q ss_pred -CCCCCcceeEEEE--CC--EEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CC
Q 012755 284 -MNLPRKLCSGFFM--DG--KFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NN 356 (457)
Q Consensus 284 -~p~~r~~~~~~~~--~g--~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g 356 (457)
....+.....+.+ ++ .+.+.|+.+ ..+.+||+.+.+-...- .. .......+.+ ++
T Consensus 512 ~~~~h~~~v~~~~~~~~~~~~~l~s~s~d------~~v~vwd~~~~~~~~~~--~~----------h~~~v~~v~~spdg 573 (694)
T 3dm0_A 512 GGEGHRDWVSCVRFSPNTLQPTIVSASWD------KTVKVWNLSNCKLRSTL--AG----------HTGYVSTVAVSPDG 573 (694)
T ss_dssp STTSCSSCEEEEEECSCSSSCEEEEEETT------SCEEEEETTTCCEEEEE--CC----------CSSCEEEEEECTTS
T ss_pred CCCCCCCcEEEEEEeCCCCcceEEEEeCC------CeEEEEECCCCcEEEEE--cC----------CCCCEEEEEEeCCC
Confidence 1112222222332 22 344555433 35788998876543221 11 1111222233 67
Q ss_pred EEEEEecCCCeEEEEECCCCc
Q 012755 357 QLYSADQATNVVKKYNKTNNS 377 (457)
Q Consensus 357 ~ly~~gg~~~~v~~Yd~~~~~ 377 (457)
++++.|+..+.|..||..+..
T Consensus 574 ~~l~sg~~Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 574 SLCASGGKDGVVLLWDLAEGK 594 (694)
T ss_dssp SEEEEEETTSBCEEEETTTTE
T ss_pred CEEEEEeCCCeEEEEECCCCc
Confidence 788888888899999998875
No 245
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=86.97 E-value=11 Score=39.69 Aligned_cols=147 Identities=11% Similarity=0.014 Sum_probs=83.7
Q ss_pred eCCEEEEEceecCCcEEEEEECCCCcEEeCC--CCCCCccceeEEe--eCCEEEEEeeecCCCCccceEEEEeCCCCcEE
Q 012755 204 VGTQLLVFGRELSGFAIWMYSLIANCWSKCP--QMNLPRCLFGSSS--LGEVAIVAGGTDKNGCILKSAELYNSELGTWE 279 (457)
Q Consensus 204 ~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~--~lp~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~ 279 (457)
.++.||+.-. ....+.++++....-+.+. .+..|+ ++++ .++.||+..- .....++++++....-+
T Consensus 463 ~~g~LY~tD~--~~~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td~-----~~~~~I~~~~~dG~~~~ 532 (699)
T 1n7d_A 463 IHSNIYWTDS--VLGTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDW-----GTPAKIKKGGLNGVDIY 532 (699)
T ss_dssp SSSBCEECCT--TTSCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECCC-----SSSCCEEBCCSSSCCCC
T ss_pred eCCcEEEEec--cCCeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEccc-----CCCCeEEEEeCCCCCee
Confidence 4678888632 2356889998766544432 233333 2333 3678887631 11246777776543322
Q ss_pred ECC--CCCCCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEEC
Q 012755 280 TLP--DMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVN 355 (457)
Q Consensus 280 ~~~--~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 355 (457)
.+. .+..| .++++- +++||+.-. ....|+++|+....-+.+..... ......++++.+
T Consensus 533 ~l~~~~l~~P---nGlavd~~~~~LY~aD~------~~~~I~~~d~dG~~~~~~~~~~~---------~~~~P~glavd~ 594 (699)
T 1n7d_A 533 SLVTENIQWP---NGITLDLLSGRLYWVDS------KLHSISSIDVNGGNRKTILEDEK---------RLAHPFSLAVFE 594 (699)
T ss_dssp EESCSSCSSC---CCEEECTTTCCEEEEET------TTTEEEEECSSSSCCEEECCCSS---------SCSSCCCCEEET
T ss_pred EEEeCCCCCc---cEEEEeccCCEEEEEec------CCCeEEEEccCCCceEEEEecCC---------cCCCceEeEEEC
Confidence 221 12111 123332 578999742 24678999987644443332111 012234566778
Q ss_pred CEEEEEecCCCeEEEEECCCCcE
Q 012755 356 NQLYSADQATNVVKKYNKTNNSW 378 (457)
Q Consensus 356 g~ly~~gg~~~~v~~Yd~~~~~W 378 (457)
+.||+.....+.|.++|+.+++=
T Consensus 595 ~~lywtd~~~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 595 DKVFWTDIINEAIFSANRLTGSD 617 (699)
T ss_dssp TEEEEECSTTTCEEEEETTTEEE
T ss_pred CEEEEEeCCCCeEEEEEccCCCc
Confidence 89999987788999999876543
No 246
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=86.76 E-value=13 Score=37.53 Aligned_cols=140 Identities=11% Similarity=0.050 Sum_probs=74.7
Q ss_pred cEEEEEEC--CCCcEEeCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEE
Q 012755 218 FAIWMYSL--IANCWSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFF 295 (457)
Q Consensus 218 ~~v~~yd~--~t~~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~ 295 (457)
..++..+. ....- .+...+..+ ..+...-++.++++.+..+ .+.+||..+++-+.+...+. ......
T Consensus 90 ~~l~~~~~~~~g~~~-~l~~~~~~~-~~~~s~dg~~~~~~s~~~~------~~~l~d~~~g~~~~l~~~~~---~~~~~s 158 (582)
T 3o4h_A 90 HALFKVNTSRPGEEQ-RLEAVKPMR-ILSGVDTGEAVVFTGATED------RVALYALDGGGLRELARLPG---FGFVSD 158 (582)
T ss_dssp EEEEEEETTSTTCCE-ECTTSCSBE-EEEEEECSSCEEEEEECSS------CEEEEEEETTEEEEEEEESS---CEEEEE
T ss_pred eEEEEEeccCCCccc-cccCCCCce-eeeeCCCCCeEEEEecCCC------CceEEEccCCcEEEeecCCC---ceEEEC
Confidence 36777777 43322 443333222 2222223445555554332 23378988888776643332 222334
Q ss_pred ECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCC--eEEEEEC
Q 012755 296 MDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQATN--VVKKYNK 373 (457)
Q Consensus 296 ~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~~~--~v~~Yd~ 373 (457)
-+|+..++++.+... ...++.+|+.+++++.+..... .. ......-||+.++.....+ .++.||.
T Consensus 159 pDG~~la~~~~~~~~--~~~i~~~d~~~g~~~~l~~~~~----------~~-~~~~~SpDG~~l~~~~~~~~~~i~~~d~ 225 (582)
T 3o4h_A 159 IRGDLIAGLGFFGGG--RVSLFTSNLSSGGLRVFDSGEG----------SF-SSASISPGMKVTAGLETAREARLVTVDP 225 (582)
T ss_dssp EETTEEEEEEEEETT--EEEEEEEETTTCCCEEECCSSC----------EE-EEEEECTTSCEEEEEECSSCEEEEEECT
T ss_pred CCCCEEEEEEEcCCC--CeEEEEEcCCCCCceEeecCCC----------cc-ccceECCCCCEEEEccCCCeeEEEEEcC
Confidence 567666655443221 2458999999999887754221 11 1111122666544544444 7999999
Q ss_pred CCCcEEEe
Q 012755 374 TNNSWTVV 381 (457)
Q Consensus 374 ~~~~W~~v 381 (457)
++++.+.+
T Consensus 226 ~~~~~~~~ 233 (582)
T 3o4h_A 226 RDGSVEDL 233 (582)
T ss_dssp TTCCEEEC
T ss_pred CCCcEEEc
Confidence 99888733
No 247
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=86.41 E-value=8 Score=37.99 Aligned_cols=106 Identities=9% Similarity=-0.067 Sum_probs=55.3
Q ss_pred cEEEEEecC-----ccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEe-CCEEEEEcee-------cCCcEEEEEECCC
Q 012755 161 HWVYLACIL-----MPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAV-GTQLLVFGRE-------LSGFAIWMYSLIA 227 (457)
Q Consensus 161 ~~l~~~~~~-----~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~-~~~lyv~GG~-------~~~~~v~~yd~~t 227 (457)
..+|+.... +.+.++|+.+.+-. ..++..... + ..+.. +..+|+.-.. ...+.+.++|+.+
T Consensus 85 ~~vyV~n~~~~~~~~~VsVID~~t~~vv--~~I~vG~~P-g---ia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 85 RRVYIQDPAHFAAITQQFVIDGSTGRIL--GMTDGGFLP-H---PVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEE--EEEEECSSC-E---EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CEEEEECCCcCCCCCeEEEEECCCCEEE--EEEECCCCC-c---eEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 346665431 57788998877532 222221111 1 12233 4567775311 1235799999999
Q ss_pred CcEEe-CCCCC-CCc-----cceeEE--eeCCEEEEEeeecCCCCccceEEEEeCCCCcE
Q 012755 228 NCWSK-CPQMN-LPR-----CLFGSS--SLGEVAIVAGGTDKNGCILKSAELYNSELGTW 278 (457)
Q Consensus 228 ~~W~~-l~~lp-~~r-----~~~~~~--~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W 278 (457)
++-.. ++ ++ .+| .-+.++ .-+.++||..-. ..+.+.++|+.+++=
T Consensus 159 ~~vv~~I~-v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~-----~~~~VsVID~~t~kv 212 (426)
T 3c75_H 159 FLPIADIE-LPDAPRFLVGTYQWMNALTPDNKNLLFYQFS-----PAPAVGVVDLEGKTF 212 (426)
T ss_dssp CCEEEEEE-ETTCCCCCBSCCGGGSEECTTSSEEEEEECS-----SSCEEEEEETTTTEE
T ss_pred CcEEEEEE-CCCccccccCCCcceEEEcCCCCEEEEEecC-----CCCeEEEEECCCCeE
Confidence 87532 22 11 111 112222 235688887321 136789999998873
No 248
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=86.33 E-value=24 Score=33.75 Aligned_cols=153 Identities=8% Similarity=0.020 Sum_probs=78.1
Q ss_pred CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCce
Q 012755 249 GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTW 326 (457)
Q Consensus 249 ~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W 326 (457)
++.+++.|+.+ ..+.+||..+.+-...-..+........+.+ +++..+.|+.+ ..+..||+.+++.
T Consensus 181 ~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d------g~i~iwd~~~~~~ 248 (437)
T 3gre_A 181 EKSLLVALTNL------SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR------GIIDIWDIRFNVL 248 (437)
T ss_dssp SCEEEEEEETT------SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT------SCEEEEETTTTEE
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC------CeEEEEEcCCccE
Confidence 46666666643 4788999988764322111101112222223 56666666643 3578899988654
Q ss_pred EEcCCCCCCCCCCCCCCCCCCCCEEEE-----ECCEEEEEecCCCeEEEEECCCCcEEEe-ccC----------CCc---
Q 012755 327 KRIENMYPSNVGTQSNPAMSSPPLVAV-----VNNQLYSADQATNVVKKYNKTNNSWTVV-KRL----------PVR--- 387 (457)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~r~~~~~~~-----~~g~ly~~gg~~~~v~~Yd~~~~~W~~v-~~~----------p~~--- 387 (457)
...-.... ......++. -++.+++.|+..+.|..||..+..-... ... |..
T Consensus 249 ~~~~~~~~----------~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 318 (437)
T 3gre_A 249 IRSWSFGD----------HAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGL 318 (437)
T ss_dssp EEEEBCTT----------CEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSG
T ss_pred EEEEecCC----------CCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceeccccccc
Confidence 32211111 000001111 1355677777777899999987653221 110 000
Q ss_pred ----cC--CCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 388 ----AN--SFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 388 ----~~--~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
.. .+...-..+...++++++.||.++ .+.+||..+.
T Consensus 319 ~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~------~i~~wd~~~~ 360 (437)
T 3gre_A 319 EELNFCGIRSLNALSTISVSNDKILLTDEATS------SIVMFSLNEL 360 (437)
T ss_dssp GGCCCCCCCSGGGGCCEEEETTEEEEEEGGGT------EEEEEETTCG
T ss_pred ccceecccccCCceEEEEECCceEEEecCCCC------eEEEEECCCc
Confidence 00 000111123333788888888764 5888998763
No 249
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=86.28 E-value=23 Score=33.47 Aligned_cols=190 Identities=8% Similarity=0.012 Sum_probs=94.1
Q ss_pred EEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEe---CCEEEEEceecCCcEEEEEECCCC--cEEeCCCC
Q 012755 162 WVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAV---GTQLLVFGRELSGFAIWMYSLIAN--CWSKCPQM 236 (457)
Q Consensus 162 ~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~---~~~lyv~GG~~~~~~v~~yd~~t~--~W~~l~~l 236 (457)
.++..+....+..||..+.+-........+. .+...-..+.. ++.+++.|+.+. .+.+||.... .-..+..-
T Consensus 172 ~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~sgs~D~--~v~~wd~~~~~~~~~~~~~h 248 (380)
T 3iz6_a 172 RLITGSGDQTCVLWDVTTGQRISIFGSEFPS-GHTADVLSLSINSLNANMFISGSCDT--TVRLWDLRITSRAVRTYHGH 248 (380)
T ss_dssp CEEEECTTSCEEEECTTTCCEEEEECCCSSS-SCCSCEEEEEECSSSCCEEEEEETTS--CEEEEETTTTCCCCEEECCC
T ss_pred EEEEECCCCcEEEEEcCCCcEEEEeecccCC-CCccCeEEEEeecCCCCEEEEEECCC--eEEEEECCCCCcceEEECCc
Confidence 4555555677888998877543322111111 11111111222 567777776543 5788887532 11111110
Q ss_pred CCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEEC-CCCCC----CCc-ceeEE-EECCEEEEEeccCC
Q 012755 237 NLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWETL-PDMNL----PRK-LCSGF-FMDGKFYIIGGMSS 308 (457)
Q Consensus 237 p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~-~~~p~----~r~-~~~~~-~~~g~iyv~GG~~~ 308 (457)
...-.+++. -++..++.|+.+ ..+.++|..++.-... ...+. ... -.+++ ..+|++.+.|+.+
T Consensus 249 --~~~v~~v~~~p~~~~l~s~s~D------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d- 319 (380)
T 3iz6_a 249 --EGDINSVKFFPDGQRFGTGSDD------GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN- 319 (380)
T ss_dssp --SSCCCEEEECTTSSEEEEECSS------SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT-
T ss_pred --CCCeEEEEEecCCCeEEEEcCC------CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC-
Confidence 001112222 256667777654 4588899988764332 11111 011 11222 2367776666543
Q ss_pred CCCCCceEEEEECCCCceEE-cCCCCCCCCCCCCCCCCCCCCEEE-EECCEEEEEecCCCeEEEEECCCC
Q 012755 309 PTDPLTCGEEYNLETRTWKR-IENMYPSNVGTQSNPAMSSPPLVA-VVNNQLYSADQATNVVKKYNKTNN 376 (457)
Q Consensus 309 ~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~~~~~~~~r~~~~~~-~~~g~ly~~gg~~~~v~~Yd~~~~ 376 (457)
..+.+||..+.+-.. +..... .......+++ .-+|..++.|+.-+.+..||....
T Consensus 320 -----g~i~vwd~~~~~~~~~~~~~~~--------~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 320 -----GDCYVWDTLLAEMVLNLGTLQN--------SHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp -----SCEEEEETTTCCEEEEECCSCS--------SCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred -----CCEEEEECCCCceEEEEecccC--------CCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 357889987765432 222211 0011111222 237777888888888999987653
No 250
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=86.28 E-value=7.7 Score=39.27 Aligned_cols=180 Identities=9% Similarity=-0.103 Sum_probs=92.5
Q ss_pred EEEEECCCCcEEeCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEE-EECC
Q 012755 220 IWMYSLIANCWSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGF-FMDG 298 (457)
Q Consensus 220 v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~-~~~g 298 (457)
+.+||..+++-+.+...+. .. ....-+|+..++++.+... ...++++|..+++++.+..-... ....+ .-+|
T Consensus 134 ~~l~d~~~g~~~~l~~~~~--~~-~~~spDG~~la~~~~~~~~--~~~i~~~d~~~g~~~~l~~~~~~--~~~~~~SpDG 206 (582)
T 3o4h_A 134 VALYALDGGGLRELARLPG--FG-FVSDIRGDLIAGLGFFGGG--RVSLFTSNLSSGGLRVFDSGEGS--FSSASISPGM 206 (582)
T ss_dssp EEEEEEETTEEEEEEEESS--CE-EEEEEETTEEEEEEEEETT--EEEEEEEETTTCCCEEECCSSCE--EEEEEECTTS
T ss_pred ceEEEccCCcEEEeecCCC--ce-EEECCCCCEEEEEEEcCCC--CeEEEEEcCCCCCceEeecCCCc--cccceECCCC
Confidence 4478988887766643222 11 1223356555555543221 24699999999998877432211 11122 2266
Q ss_pred EEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCE-EEEECCEEEEEecCCCeEEEEECCCCc
Q 012755 299 KFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPL-VAVVNNQLYSADQATNVVKKYNKTNNS 377 (457)
Q Consensus 299 ~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~g~ly~~gg~~~~v~~Yd~~~~~ 377 (457)
+..+.+..++ ...++.+|+.+++...+..... . ...+....... ...-+|++++.+...+.+..|+. ++
T Consensus 207 ~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~ 276 (582)
T 3o4h_A 207 KVTAGLETAR----EARLVTVDPRDGSVEDLELPSK-D---FSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GE 276 (582)
T ss_dssp CEEEEEECSS----CEEEEEECTTTCCEEECCCSCS-H---HHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TE
T ss_pred CEEEEccCCC----eeEEEEEcCCCCcEEEccCCCc-C---hhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CC
Confidence 6544332221 2478999999988773322111 0 00000000000 02336777777766678888888 44
Q ss_pred EEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 378 WTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 378 W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
... .+... -..++ .. ++++++.++... ....++.++...
T Consensus 277 ~~~---~~~~~----v~~~~-~s-dg~~l~~~s~~~---~p~~l~~~d~~~ 315 (582)
T 3o4h_A 277 RVE---APQGN----HGRVV-LW-RGKLVTSHTSLS---TPPRIVSLPSGE 315 (582)
T ss_dssp EEC---CCSSE----EEEEE-EE-TTEEEEEEEETT---EEEEEEEETTCC
T ss_pred eec---cCCCc----eEEEE-ec-CCEEEEEEcCCC---CCCeEEEEcCCC
Confidence 332 12111 11122 23 888887765542 234677777653
No 251
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=86.04 E-value=4.7 Score=39.57 Aligned_cols=133 Identities=13% Similarity=0.084 Sum_probs=73.5
Q ss_pred CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE--CC-EEEEEeccCCCCCCCceEEEEECCCCc
Q 012755 249 GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM--DG-KFYIIGGMSSPTDPLTCGEEYNLETRT 325 (457)
Q Consensus 249 ~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g-~iyv~GG~~~~~~~~~~~~~yd~~t~~ 325 (457)
++.||+.-- . ..+.++|+.++..+.+.. . ......+.+ +| .||+.....+ .....+..++... .
T Consensus 149 ~g~Lyv~d~-----~--~~I~~id~~~~~v~~~~~-~--~~~P~~ia~d~~G~~lyvad~~~~--~~~~~v~~~~~~g-~ 215 (430)
T 3tc9_A 149 HNHLYLVGE-----Q--HPTRLIDFEKEYVSTVYS-G--LSKVRTICWTHEADSMIITNDQNN--NDRPNNYILTRES-G 215 (430)
T ss_dssp EEEEEEEEB-----T--EEEEEEETTTTEEEEEEC-C--CSCEEEEEECTTSSEEEEEECCSC--TTSEEEEEEEGGG-T
T ss_pred CCeEEEEeC-----C--CcEEEEECCCCEEEEEec-C--CCCcceEEEeCCCCEEEEEeCCCC--cccceEEEEeCCC-c
Confidence 478998732 1 678999999988877643 1 112222332 44 4999864322 1233456666543 3
Q ss_pred eE---EcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEE
Q 012755 326 WK---RIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKA 400 (457)
Q Consensus 326 W~---~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~ 400 (457)
|. .+... ...+++++. +|.||+.....+.|++||+++..-..+...+... .+ .++++..
T Consensus 216 ~~~~~~l~~~-------------~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~-~P--~gia~~p 279 (430)
T 3tc9_A 216 FKVITELTKG-------------QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSG-WE--FHIQFHP 279 (430)
T ss_dssp SCSEEEEEEC-------------SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSS-CC--EEEEECT
T ss_pred eeeeeeeccC-------------CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCC-cc--eeEEEcC
Confidence 43 22221 222344443 6899999877789999999987654443333211 01 1233222
Q ss_pred eCCEEEEEcC
Q 012755 401 CGNSLLVIGG 410 (457)
Q Consensus 401 ~~g~lyv~GG 410 (457)
.++.||+.--
T Consensus 280 dG~~lyv~d~ 289 (430)
T 3tc9_A 280 SGNYAYIVVV 289 (430)
T ss_dssp TSSEEEEEET
T ss_pred CCCEEEEEEC
Confidence 2445898753
No 252
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=86.03 E-value=23 Score=33.37 Aligned_cols=60 Identities=15% Similarity=0.259 Sum_probs=37.0
Q ss_pred CCEEEEEec----------CCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEe
Q 012755 355 NNQLYSADQ----------ATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSW 424 (457)
Q Consensus 355 ~g~ly~~gg----------~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y 424 (457)
++++|+... ..+.|++||.++.+ .+..++... . .++++..-+..||+.++ ..+.+|
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~~~~--p--~~ia~spdg~~l~v~n~--------~~v~v~ 330 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIPGRD--A--LSMTIDQQRNLMLTLDG--------GNVNVY 330 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEECTT--C--CEEEEETTTTEEEEECS--------SCEEEE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEecCC--e--eEEEECCCCCEEEEeCC--------CeEEEE
Confidence 478998753 13589999998874 455444332 1 23444334557777653 158888
Q ss_pred eCCC
Q 012755 425 DPTD 428 (457)
Q Consensus 425 ~~~~ 428 (457)
|+++
T Consensus 331 D~~t 334 (361)
T 2oiz_A 331 DISQ 334 (361)
T ss_dssp ECSS
T ss_pred ECCC
Confidence 9876
No 253
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=85.93 E-value=15 Score=33.82 Aligned_cols=101 Identities=9% Similarity=0.013 Sum_probs=53.4
Q ss_pred cEEEEEECCCCcE-EeCCCCCCCccceeEEee-CCEEEEEeeecCCCC--c-cceEEEEeCCCCcEEECCCCCCCCccee
Q 012755 218 FAIWMYSLIANCW-SKCPQMNLPRCLFGSSSL-GEVAIVAGGTDKNGC--I-LKSAELYNSELGTWETLPDMNLPRKLCS 292 (457)
Q Consensus 218 ~~v~~yd~~t~~W-~~l~~lp~~r~~~~~~~~-~~~iyv~GG~~~~~~--~-~~~v~~yd~~t~~W~~~~~~p~~r~~~~ 292 (457)
..++++|..+++. +.+.. + .....+.. ++ +++.+..+.... . ...++.+| +++++.+..- ....
T Consensus 152 ~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~----~~~~ 220 (347)
T 2gop_A 152 TTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK----VSFY 220 (347)
T ss_dssp EEEEEEETTTTEEEEEEEE-E---TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE----ESEE
T ss_pred ceEEEEECCCCeEEeeecC-C---CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC----ccee
Confidence 4689999998887 66544 2 22222222 44 555554332111 1 45788888 7777766432 1112
Q ss_pred EEEECCEEEEEeccCCC--CCCCceEEEEECCCCceEEcCC
Q 012755 293 GFFMDGKFYIIGGMSSP--TDPLTCGEEYNLETRTWKRIEN 331 (457)
Q Consensus 293 ~~~~~g~iyv~GG~~~~--~~~~~~~~~yd~~t~~W~~~~~ 331 (457)
...-+|+..++.+.... ......++.+| ++++..+..
T Consensus 221 ~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~ 259 (347)
T 2gop_A 221 AVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILD 259 (347)
T ss_dssp EEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESST
T ss_pred eECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccc
Confidence 22556664444332211 11245788888 667776643
No 254
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=85.93 E-value=27 Score=34.44 Aligned_cols=69 Identities=13% Similarity=0.040 Sum_probs=38.1
Q ss_pred CCEEEEEceecCCcEEEEEECCCC----cEEeCCC---C----CCCccceeE-EeeCCEEEEEeeecCCCCccceEEEEe
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIAN----CWSKCPQ---M----NLPRCLFGS-SSLGEVAIVAGGTDKNGCILKSAELYN 272 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~----~W~~l~~---l----p~~r~~~~~-~~~~~~iyv~GG~~~~~~~~~~v~~yd 272 (457)
...+|+-|.. ++.++++|..++ +-.+.-. + ...+ -|.+ +.-++ |||..--+..+.....+.++|
T Consensus 95 r~~l~v~~l~--s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~-Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 95 RRFLIVPGLR--SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSR-LHTVHCGPDA-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp SCEEEEEBTT--TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEE-EEEEEECSSC-EEEEEEEETTSCSCCEEEEEC
T ss_pred CCEEEEccCC--CCeEEEEECCCCCCCceeeeeechhhcccccCCCc-ccceeECCCe-EEEEcCCCcCCCCCCeEEEEE
Confidence 4566665533 467999998776 3222110 1 1112 2333 33355 777543322334457899999
Q ss_pred CCCCc
Q 012755 273 SELGT 277 (457)
Q Consensus 273 ~~t~~ 277 (457)
.+|.+
T Consensus 171 ~~T~~ 175 (462)
T 2ece_A 171 HYSFE 175 (462)
T ss_dssp TTTCC
T ss_pred CCCCe
Confidence 99876
No 255
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=85.84 E-value=26 Score=35.66 Aligned_cols=185 Identities=14% Similarity=0.095 Sum_probs=94.3
Q ss_pred EEEEceecCCcEEEEEECCCCcEEeCCCCCC-CccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECC-CC
Q 012755 208 LLVFGRELSGFAIWMYSLIANCWSKCPQMNL-PRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLP-DM 284 (457)
Q Consensus 208 lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~-~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~-~~ 284 (457)
.++.|+.+. .+.+||..+.+.... +.. ...-.+++. -++++++.|+.+ ..+.++|..+++-...- ..
T Consensus 162 ~l~s~s~D~--~v~lwd~~~~~~~~~--l~~H~~~V~~v~fspdg~~las~s~D------~~i~lwd~~~g~~~~~~~~~ 231 (611)
T 1nr0_A 162 RIISGSDDN--TVAIFEGPPFKFKST--FGEHTKFVHSVRYNPDGSLFASTGGD------GTIVLYNGVDGTKTGVFEDD 231 (611)
T ss_dssp EEEEEETTS--CEEEEETTTBEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTCCEEEECBCT
T ss_pred EEEEEeCCC--eEEEEECCCCeEeee--eccccCceEEEEECCCCCEEEEEECC------CcEEEEECCCCcEeeeeccc
Confidence 456665543 577788766543321 111 111122222 266777777754 45788898877654321 10
Q ss_pred C-C--CC-cceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEE
Q 012755 285 N-L--PR-KLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQL 358 (457)
Q Consensus 285 p-~--~r-~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~l 358 (457)
. . .. .....+.+ +++..+.|+.+ ..+..||..+.+....-.... ........+..++..
T Consensus 232 ~~~~~~h~~~V~~v~~spdg~~l~s~s~D------~~v~lWd~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 296 (611)
T 1nr0_A 232 SLKNVAHSGSVFGLTWSPDGTKIASASAD------KTIKIWNVATLKVEKTIPVGT---------RIEDQQLGIIWTKQA 296 (611)
T ss_dssp TSSSCSSSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEECCS---------SGGGCEEEEEECSSC
T ss_pred cccccccCCCEEEEEECCCCCEEEEEeCC------CeEEEEeCCCCceeeeecCCC---------CccceeEEEEEcCCE
Confidence 0 0 11 11112222 56666666543 468889998876643322111 011112233446766
Q ss_pred EEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEE-EeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 359 YSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFK-ACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 359 y~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~-~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
++.++..+.+..||+++..-... +.... ..-.+++ .-+|+.++.|+.++ .+.+||..+.
T Consensus 297 l~s~s~d~~i~~~~~~~~~~~~~--~~gh~----~~v~~l~~spdg~~l~s~s~D~------~v~~Wd~~~~ 356 (611)
T 1nr0_A 297 LVSISANGFINFVNPELGSIDQV--RYGHN----KAITALSSSADGKTLFSADAEG------HINSWDISTG 356 (611)
T ss_dssp EEEEETTCCEEEEETTTTEEEEE--ECCCS----SCEEEEEECTTSSEEEEEETTS------CEEEEETTTC
T ss_pred EEEEeCCCcEEEEeCCCCCcceE--EcCCC----CCEEEEEEeCCCCEEEEEeCCC------cEEEEECCCC
Confidence 77777778899999987753222 11111 1111122 22566777776653 3677887653
No 256
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=85.29 E-value=22 Score=32.51 Aligned_cols=104 Identities=8% Similarity=0.044 Sum_probs=57.2
Q ss_pred CEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceE
Q 012755 250 EVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWK 327 (457)
Q Consensus 250 ~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 327 (457)
+..++.|+.+ ..+.+||..+........+.........+.+ +++..+.|+.+ ..+.+||..+..-.
T Consensus 54 g~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~~~~ 121 (368)
T 3mmy_A 54 GNFLIAGSWA------NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD------KTAKMWDLSSNQAI 121 (368)
T ss_dssp SEEEEEEETT------SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEE
T ss_pred ceEEEEECCC------CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC------CcEEEEEcCCCCce
Confidence 4677777643 3577888776332211111111111122222 56565665532 46888999988765
Q ss_pred EcCCCCCCCCCCCCCCCCCCCCEEEE---ECCEEEEEecCCCeEEEEECCCCc
Q 012755 328 RIENMYPSNVGTQSNPAMSSPPLVAV---VNNQLYSADQATNVVKKYNKTNNS 377 (457)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~r~~~~~~~---~~g~ly~~gg~~~~v~~Yd~~~~~ 377 (457)
.+..... ....+.. -++.+++.++..+.+..||..+.+
T Consensus 122 ~~~~~~~------------~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 122 QIAQHDA------------PVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp EEEECSS------------CEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred eeccccC------------ceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 5432111 1112222 267778888888899999988764
No 257
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=85.28 E-value=27 Score=33.39 Aligned_cols=154 Identities=10% Similarity=-0.017 Sum_probs=78.3
Q ss_pred eEEeCCEEEEEceecCCcEEEEEECCCCcE--Ee----CCCCCCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeC
Q 012755 201 SLAVGTQLLVFGRELSGFAIWMYSLIANCW--SK----CPQMNLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNS 273 (457)
Q Consensus 201 ~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W--~~----l~~lp~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~ 273 (457)
+....+.+|+|-|. .+|+++.....- .. -+.+|.. ...+... .++++|+|-| +..|+|+.
T Consensus 186 v~~~~g~~~fFkg~----~~Wr~~~~~~~~~p~~I~~~wpgLP~~-iDAa~~~~~~g~~~fFkg--------~~yWr~~~ 252 (365)
T 3ba0_A 186 VTTVGNKIFFFKDR----FFWLKVSERPKTSVNLISSLWPTLPSG-IEAAYEIEARNQVFLFKD--------DKYWLISN 252 (365)
T ss_dssp EEEETTEEEEEETT----EEEECCSSCCCCCEEEHHHHCSSCCSS-CCEEEEEGGGTEEEEEET--------TEEEECST
T ss_pred EEEcCCeEEEEeCC----EEEEEcCCCccCCccchhhhccCCCCC-ccEEEEecCCCEEEEEeC--------CEEEEEcC
Confidence 45578999998653 467766543211 00 1233321 2222122 3789999965 35667765
Q ss_pred CCCc--E-EECCC--CCCCCcceeEE-EE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCC
Q 012755 274 ELGT--W-ETLPD--MNLPRKLCSGF-FM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAM 345 (457)
Q Consensus 274 ~t~~--W-~~~~~--~p~~r~~~~~~-~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~ 345 (457)
.+.. + +.+.. +|..-....+| .. ++++|.+-| +..++||..+++-.. .-|. +...+..-.+
T Consensus 253 ~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG--------~~yw~yd~~~~~v~~--gyPk-~I~~~f~g~p 321 (365)
T 3ba0_A 253 LRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD--------NQYWRYDERRQMMDP--GYPK-LITKNFQGIG 321 (365)
T ss_dssp TSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET--------TEEEEEETTTTEECS--SCCC-CHHHHSTTCC
T ss_pred CcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC--------CEEEEEeCCcceecC--CCCc-chhhcCCCCC
Confidence 3221 1 12322 23211122233 33 589999955 357889987653211 1000 0000000012
Q ss_pred CCCCEEEEE-CCEEEEEecCCCeEEEEECCCCcEEE
Q 012755 346 SSPPLVAVV-NNQLYSADQATNVVKKYNKTNNSWTV 380 (457)
Q Consensus 346 r~~~~~~~~-~g~ly~~gg~~~~v~~Yd~~~~~W~~ 380 (457)
...-++... +|++|.+-| +..|+||..+++=..
T Consensus 322 ~~iDaA~~~~~g~~YfFkg--~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 322 PKIDAVFYSKNKYYYFFQG--SNQFEYDFLLQRITK 355 (365)
T ss_dssp SSCSEEEEETTTEEEEEET--TEEEEEETTTTEEEE
T ss_pred CccceeeEecCCcEEEEeC--CEEEEEECCccEEec
Confidence 223345555 899999966 689999998876443
No 258
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=85.20 E-value=38 Score=35.14 Aligned_cols=200 Identities=9% Similarity=-0.071 Sum_probs=96.6
Q ss_pred EEEEEECCCCcEEeCCC---CCCCc-cceeEE--eeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCccee
Q 012755 219 AIWMYSLIANCWSKCPQ---MNLPR-CLFGSS--SLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCS 292 (457)
Q Consensus 219 ~v~~yd~~t~~W~~l~~---lp~~r-~~~~~~--~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~ 292 (457)
.+|+.+.....|+.+-+ +.... ...... +-+++..+++...+. .....++++|..+++...... +... ...
T Consensus 99 ~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G-~~~~~i~v~d~~tg~~~~~~~-~~~~-~~~ 175 (710)
T 2xdw_A 99 VLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASG-SDWVTIKFMKVDGAKELPDVL-ERVK-FSC 175 (710)
T ss_dssp EEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETT-CSCEEEEEEETTTTEEEEEEE-EEEC-SCC
T ss_pred EEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCC-CceEEEEEEECCCCCCCcccc-cCcc-cce
Confidence 56777666666664421 11111 111111 225555555443222 223489999999998765311 1111 112
Q ss_pred EEEE-CCEEEEEeccCCCC----------CCCceEEEEECCCCceE--EcCCCCCCCCCCCCCCCCCCCCEE-EEECCEE
Q 012755 293 GFFM-DGKFYIIGGMSSPT----------DPLTCGEEYNLETRTWK--RIENMYPSNVGTQSNPAMSSPPLV-AVVNNQL 358 (457)
Q Consensus 293 ~~~~-~g~iyv~GG~~~~~----------~~~~~~~~yd~~t~~W~--~~~~~~~~~~~~~~~~~~r~~~~~-~~~~g~l 358 (457)
.+.. +|+.++++...... .....++.+++.+++.. .+...+. .......+ ..-+|+.
T Consensus 176 ~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~---------~~~~~~~~~~SpDg~~ 246 (710)
T 2xdw_A 176 MAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPD---------EPKWMGGAELSDDGRY 246 (710)
T ss_dssp EEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTT---------CTTCEEEEEECTTSCE
T ss_pred EEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCC---------CCeEEEEEEEcCCCCE
Confidence 2222 55433333322210 12345888898887632 2211111 01111112 2225553
Q ss_pred EEEecC-----CCeEEEEECCC------C--cEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEee
Q 012755 359 YSADQA-----TNVVKKYNKTN------N--SWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWD 425 (457)
Q Consensus 359 y~~gg~-----~~~v~~Yd~~~------~--~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~ 425 (457)
.++... .+.++.+|..+ . .++.+..-.... ...+...++.||+.+...... ..++.+|
T Consensus 247 l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~------~~~~s~dg~~l~~~s~~~~~~---~~l~~~d 317 (710)
T 2xdw_A 247 VLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGE------YDYVTNEGTVFTFKTNRHSPN---YRLINID 317 (710)
T ss_dssp EEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC------EEEEEEETTEEEEEECTTCTT---CEEEEEE
T ss_pred EEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcE------EEEEeccCCEEEEEECCCCCC---CEEEEEe
Confidence 333321 56899999876 4 577775322111 122334577899887654322 3688899
Q ss_pred CCCCCCCCCCeeEecc
Q 012755 426 PTDGNSGEAQWNELAV 441 (457)
Q Consensus 426 ~~~~~w~~~~W~~l~~ 441 (457)
..+. ...+|+.|..
T Consensus 318 ~~~~--~~~~~~~l~~ 331 (710)
T 2xdw_A 318 FTDP--EESKWKVLVP 331 (710)
T ss_dssp TTSC--CGGGCEEEEC
T ss_pred CCCC--CcccceeccC
Confidence 8763 2225777654
No 259
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=85.02 E-value=47 Score=36.33 Aligned_cols=151 Identities=14% Similarity=0.084 Sum_probs=80.9
Q ss_pred eCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEE-EEeCCCCcEEECC
Q 012755 204 VGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAE-LYNSELGTWETLP 282 (457)
Q Consensus 204 ~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~-~yd~~t~~W~~~~ 282 (457)
.++..++++. ...+++++..++....+...+..+.....-. +++.+++++. ...++ ++|..++.-..+.
T Consensus 306 pdG~~la~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~------~~~l~~~~d~~~~~~~~l~ 375 (1045)
T 1k32_A 306 LDGDLIAFVS---RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR------EGDFLGIYDYRTGKAEKFE 375 (1045)
T ss_dssp CGGGCEEEEE---TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET------TEEEEEEEETTTCCEEECC
T ss_pred CCCCEEEEEE---cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC------CCceEEEEECCCCCceEec
Confidence 4554444433 3468888888777666543222121111222 5554444432 24788 8999988877665
Q ss_pred CCCCCCcceeEE-EECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEE
Q 012755 283 DMNLPRKLCSGF-FMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSA 361 (457)
Q Consensus 283 ~~p~~r~~~~~~-~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~ 361 (457)
.........+ .-+|+..+++.. ...+..+|+.+++-..+..... .........-+|+.+++
T Consensus 376 --~~~~~~~~~~~SpDG~~la~~~~------~~~v~~~d~~tg~~~~~~~~~~----------~~v~~~~~SpDG~~la~ 437 (1045)
T 1k32_A 376 --ENLGNVFAMGVDRNGKFAVVAND------RFEIMTVDLETGKPTVIERSRE----------AMITDFTISDNSRFIAY 437 (1045)
T ss_dssp --CCCCSEEEEEECTTSSEEEEEET------TSEEEEEETTTCCEEEEEECSS----------SCCCCEEECTTSCEEEE
T ss_pred --CCccceeeeEECCCCCEEEEECC------CCeEEEEECCCCceEEeccCCC----------CCccceEECCCCCeEEE
Confidence 2111112222 226665555442 2478899999988766542211 11111222336665554
Q ss_pred ecC----------CCeEEEEECCCCcEEEec
Q 012755 362 DQA----------TNVVKKYNKTNNSWTVVK 382 (457)
Q Consensus 362 gg~----------~~~v~~Yd~~~~~W~~v~ 382 (457)
++. ...++.||.++++...+.
T Consensus 438 ~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 438 GFPLKHGETDGYVMQAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp EEEECSSTTCSCCEEEEEEEETTTTEEEECS
T ss_pred EecCccccccCCCCCeEEEEECCCCcEEEee
Confidence 432 248999999988755543
No 260
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=85.00 E-value=20 Score=31.69 Aligned_cols=145 Identities=11% Similarity=0.068 Sum_probs=75.4
Q ss_pred eCCEEEEEceecCCcEEEEEE------C---------CCCcEEeCCCCCCCccceeEEe--eCCEEEEEeeecCCCCccc
Q 012755 204 VGTQLLVFGRELSGFAIWMYS------L---------IANCWSKCPQMNLPRCLFGSSS--LGEVAIVAGGTDKNGCILK 266 (457)
Q Consensus 204 ~~~~lyv~GG~~~~~~v~~yd------~---------~t~~W~~l~~lp~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~ 266 (457)
..+.+|+|-|. .+|+++ . .+..|..+|.-+......-++. .++++|+|-| +
T Consensus 12 ~~ge~~fFk~~----~~wr~~~~~~~~~~~~~~~p~~I~~~Wp~LP~~~f~~~~iDAa~~~~~g~~~fFkg--------~ 79 (225)
T 3oyo_A 12 SEYEVYFFAKN----KYVRLHYTPGASSDTILTNLRLISSGFPSLAGTPFAEPGIDCSFHTEASEAYVFSG--------N 79 (225)
T ss_dssp STTEEEEEETT----EEEEEECCTTCSCCEEEEEEEEHHHHCGGGTTSTTTTTCCSEEEECSTTEEEEEET--------T
T ss_pred CCCEEEEEECC----EEEEEecccccccCcccCCceehhhhcccCCCccCCCCCEeEEEEcCCCeEEEEcC--------C
Confidence 36888888652 466666 1 2334555543222112222222 5899999966 4
Q ss_pred eEEEEeCCCC----cEEE--------CCCCCCC--CcceeEEEE---CCEEEEEeccCCCCCCCceEEEEECCCCceEE-
Q 012755 267 SAELYNSELG----TWET--------LPDMNLP--RKLCSGFFM---DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKR- 328 (457)
Q Consensus 267 ~v~~yd~~t~----~W~~--------~~~~p~~--r~~~~~~~~---~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~- 328 (457)
..|+||..++ .-.. .+.+|.. ...-.+|.. ++++|.+-| +..++||..+++-..
T Consensus 80 ~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG--------~~yw~~d~~~~~~~~g 151 (225)
T 3oyo_A 80 HSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG--------NKYVRIAYDSKQLVGN 151 (225)
T ss_dssp EEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET--------TEEEEEETTTTEEEEE
T ss_pred EEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC--------CeEEEEECCCCeecCC
Confidence 6788876332 1211 1223321 112233433 689999965 356889876665443
Q ss_pred ---cCC-CCCCCCCCCCCCCCCCCCEEEE--ECCEEEEEecCCCeEEEEECC
Q 012755 329 ---IEN-MYPSNVGTQSNPAMSSPPLVAV--VNNQLYSADQATNVVKKYNKT 374 (457)
Q Consensus 329 ---~~~-~~~~~~~~~~~~~~r~~~~~~~--~~g~ly~~gg~~~~v~~Yd~~ 374 (457)
+.. .+. .....-+...-++.. .++++|++-| +..|+||..
T Consensus 152 Pk~I~~~fpg----~~~~~f~~~iDAAf~~~~~g~~YfFkG--~~ywr~d~~ 197 (225)
T 3oyo_A 152 IRNIGDGFPV----LNGTEFESGIDACFASHKEPEAYLFKG--QNYVRIDFT 197 (225)
T ss_dssp EEEHHHHCGG----GTTSTTTTCCSEEEECSSTTEEEEEET--TEEEEEECC
T ss_pred CcchhhcCCC----cccccCCCCcCEEEEeCCCCEEEEEEC--CEEEEEeCC
Confidence 111 111 000000112233333 2789999976 689999998
No 261
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=84.91 E-value=3 Score=41.00 Aligned_cols=144 Identities=8% Similarity=0.022 Sum_probs=79.6
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEe-e-CCEEEEEeeecCCCCccceEEEEeCCCCcE---E
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSS-L-GEVAIVAGGTDKNGCILKSAELYNSELGTW---E 279 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W---~ 279 (457)
++.||+.-.. ..+.++|+.+++.+.+.. ...+. ..+++ - ++.||+....++ .....+..++... .| .
T Consensus 149 ~g~Lyv~d~~---~~I~~id~~~~~v~~~~~-~~~~P-~~ia~d~~G~~lyvad~~~~--~~~~~v~~~~~~g-~~~~~~ 220 (430)
T 3tc9_A 149 HNHLYLVGEQ---HPTRLIDFEKEYVSTVYS-GLSKV-RTICWTHEADSMIITNDQNN--NDRPNNYILTRES-GFKVIT 220 (430)
T ss_dssp EEEEEEEEBT---EEEEEEETTTTEEEEEEC-CCSCE-EEEEECTTSSEEEEEECCSC--TTSEEEEEEEGGG-TSCSEE
T ss_pred CCeEEEEeCC---CcEEEEECCCCEEEEEec-CCCCc-ceEEEeCCCCEEEEEeCCCC--cccceEEEEeCCC-ceeeee
Confidence 4788887532 679999999988877643 11111 22222 2 345999864332 1123456666532 23 2
Q ss_pred ECCCCCCCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-CC
Q 012755 280 TLPDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV-NN 356 (457)
Q Consensus 280 ~~~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~g 356 (457)
.++.+..+ +.+++. +|.||+..- ....+++||+.+..-..+...+. ......+++. +|
T Consensus 221 ~l~~~~~p---~giavdp~~g~lyv~d~------~~~~V~~~~~~~~~~~~~~~~~~----------~~~P~gia~~pdG 281 (430)
T 3tc9_A 221 ELTKGQNC---NGAETHPINGELYFNSW------NAGQVFRYDFTTQETTPLFTIQD----------SGWEFHIQFHPSG 281 (430)
T ss_dssp EEEECSSC---CCEEECTTTCCEEEEET------TTTEEEEEETTTTEEEEEEECSS----------SSCCEEEEECTTS
T ss_pred eeccCCCc---eEEEEeCCCCEEEEEEC------CCCEEEEEECCCCcEEEEEEcCC----------CCcceeEEEcCCC
Confidence 33322222 233433 688998742 23578999998776533332222 1111223332 45
Q ss_pred E-EEEEecCCCeEEEEECCC
Q 012755 357 Q-LYSADQATNVVKKYNKTN 375 (457)
Q Consensus 357 ~-ly~~gg~~~~v~~Yd~~~ 375 (457)
+ ||+.....+.|+++|.+.
T Consensus 282 ~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 282 NYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp SEEEEEETTTTEEEEEEEET
T ss_pred CEEEEEECCCCEEEEEeCCc
Confidence 4 999987788899877653
No 262
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=84.88 E-value=27 Score=33.21 Aligned_cols=200 Identities=10% Similarity=0.001 Sum_probs=105.0
Q ss_pred ccEEEEEecCc----cEEEEeCCCCcEEeCCCC---CCCcc------ccCCCeeeEEe----CCEEEEEceecCCcEEEE
Q 012755 160 EHWVYLACILM----PWEAFDPLRQRWMRLPRM---QCDEC------FTSADKESLAV----GTQLLVFGRELSGFAIWM 222 (457)
Q Consensus 160 ~~~l~~~~~~~----~~~~ydp~~~~W~~l~~~---p~~~~------~~~~~~~~~~~----~~~lyv~GG~~~~~~v~~ 222 (457)
...+|+..... .++..+....+|..+... +.... .... ..++.. .+.||+.+. ...+++
T Consensus 67 ~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i-~~l~~~~~~~~~~l~~g~~---~ggl~~ 142 (394)
T 3b7f_A 67 PERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHV-FWLTPGHASEPGTWYAGTS---PQGLFR 142 (394)
T ss_dssp TTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEE-EEEEECCTTSTTCEEEEEE---TTEEEE
T ss_pred CCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccce-eEEEeCCCCCCCEEEEEec---CCcEEE
Confidence 45677765433 577777778899987632 11100 0000 012221 467776542 235888
Q ss_pred EECCCCcEEeCCCC---CC--------------CccceeEEee---CCEEEEEeeecCCCCccceEEEEeCCCCcEEECC
Q 012755 223 YSLIANCWSKCPQM---NL--------------PRCLFGSSSL---GEVAIVAGGTDKNGCILKSAELYNSELGTWETLP 282 (457)
Q Consensus 223 yd~~t~~W~~l~~l---p~--------------~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~ 282 (457)
.+-...+|+.+..+ |. ....+++++- .+.||+.... ..+++.+-...+|+.+.
T Consensus 143 S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~-------ggl~~s~DgG~tW~~~~ 215 (394)
T 3b7f_A 143 STDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS-------GGVFESTDAGTDWKPLN 215 (394)
T ss_dssp ESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET-------BEEEEESSTTSSCEECC
T ss_pred EcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC-------CCEEEECCCCCCceECC
Confidence 88888899987431 21 1112333332 3567775431 24677777778999875
Q ss_pred CC------CCC-----CcceeEEEEC---CEEEEEeccCCCCCCCceEEEEECCCCceEEcCC-CCCCCCCCCCCCCCCC
Q 012755 283 DM------NLP-----RKLCSGFFMD---GKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIEN-MYPSNVGTQSNPAMSS 347 (457)
Q Consensus 283 ~~------p~~-----r~~~~~~~~~---g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~-~~~~~~~~~~~~~~r~ 347 (457)
.. |.+ ...+.+++.. +.||+.. ...+++++-...+|+.+.. ++. .....
T Consensus 216 ~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~--------~~gl~~s~D~G~tW~~~~~~l~~--------~~~~~ 279 (394)
T 3b7f_A 216 RGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN--------HCGIYRMDRREGVWKRIGDAMPR--------EVGDI 279 (394)
T ss_dssp TTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE--------TTEEEEEETTTTEEECGGGGSCT--------TTCSC
T ss_pred CCccccccCCCccccCcceeEEEECCCCCCEEEEEc--------CCeEEEeCCCCCcceECCCCCCC--------CCccc
Confidence 31 211 1123333321 6777742 1347788888889998864 221 00022
Q ss_pred CCEEEE---ECCEEEEEec------------CCCeEEEEECCCCcEEEec-cCCC
Q 012755 348 PPLVAV---VNNQLYSADQ------------ATNVVKKYNKTNNSWTVVK-RLPV 386 (457)
Q Consensus 348 ~~~~~~---~~g~ly~~gg------------~~~~v~~Yd~~~~~W~~v~-~~p~ 386 (457)
...+++ -.+.||+... ....++.-.-...+|+.+. .+|.
T Consensus 280 ~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~ 334 (394)
T 3b7f_A 280 GFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPT 334 (394)
T ss_dssp EEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCC
T ss_pred eEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCC
Confidence 222333 2467888631 1124544444447999985 3554
No 263
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=84.50 E-value=41 Score=34.86 Aligned_cols=201 Identities=7% Similarity=-0.005 Sum_probs=102.5
Q ss_pred EeCCEEEEEceec-C--CcEEEEEECCCCcEEeCCCCCCCccceeEE-eeCCEEEEEeeecCCC-------CccceEEEE
Q 012755 203 AVGTQLLVFGREL-S--GFAIWMYSLIANCWSKCPQMNLPRCLFGSS-SLGEVAIVAGGTDKNG-------CILKSAELY 271 (457)
Q Consensus 203 ~~~~~lyv~GG~~-~--~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~-~~~~~iyv~GG~~~~~-------~~~~~v~~y 271 (457)
..+|+.+++.... . ...++++|..+++......++.... ...+ .-+++.++++..+..+ .....++++
T Consensus 129 SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~ 207 (695)
T 2bkl_A 129 SWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYH 207 (695)
T ss_dssp CTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEE
T ss_pred CCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEE
Confidence 3456555544322 1 2579999999988651112221111 1222 2255655555543221 134568889
Q ss_pred eCCCCcE--EECCCCCCC-CcceeE-EEECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCC
Q 012755 272 NSELGTW--ETLPDMNLP-RKLCSG-FFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSS 347 (457)
Q Consensus 272 d~~t~~W--~~~~~~p~~-r~~~~~-~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~ 347 (457)
+..++.- ..+...+.. ...... ..-+|+..++...... ....++.+|..+..|..+..... .
T Consensus 208 ~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~--~~~~l~~~~~~~~~~~~l~~~~~------------~ 273 (695)
T 2bkl_A 208 TLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW--SENDVYWKRPGEKDFRLLVKGVG------------A 273 (695)
T ss_dssp ETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT--TEEEEEEECTTCSSCEEEEECSS------------C
T ss_pred ECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC--CceEEEEEcCCCCceEEeecCCC------------c
Confidence 9887652 222222221 122222 2235654444433221 23467777877778887764222 1
Q ss_pred CCEEEEECCEEEEEec---CCCeEEEEECCCCc---EEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEE
Q 012755 348 PPLVAVVNNQLYSADQ---ATNVVKKYNKTNNS---WTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVL 421 (457)
Q Consensus 348 ~~~~~~~~g~ly~~gg---~~~~v~~Yd~~~~~---W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v 421 (457)
....+..+|.+|+... ....++.+|.++.. |+.+-.-..... - ..+...+++|++....++ ...+
T Consensus 274 ~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~---l--~~~~~~~~~lv~~~~~dg----~~~l 344 (695)
T 2bkl_A 274 KYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSAS---L--LSVSIVGGHLSLEYLKDA----TSEV 344 (695)
T ss_dssp CEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCE---E--EEEEEETTEEEEEEEETT----EEEE
T ss_pred eEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCe---E--EEEEEECCEEEEEEEECC----EEEE
Confidence 1223335777655543 24689999987754 887753211110 0 112234888888776543 2467
Q ss_pred EEeeCC
Q 012755 422 HSWDPT 427 (457)
Q Consensus 422 ~~y~~~ 427 (457)
+.++.+
T Consensus 345 ~~~~~~ 350 (695)
T 2bkl_A 345 RVATLK 350 (695)
T ss_dssp EEEETT
T ss_pred EEEeCC
Confidence 777764
No 264
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=84.29 E-value=28 Score=32.79 Aligned_cols=232 Identities=11% Similarity=0.067 Sum_probs=111.9
Q ss_pred ccEEEEEe-cCccEEEEeCCCCcEEeCCCCCCCc----cccCCCeeeEE----eCCEEEEEcee-----------cCCcE
Q 012755 160 EHWVYLAC-ILMPWEAFDPLRQRWMRLPRMQCDE----CFTSADKESLA----VGTQLLVFGRE-----------LSGFA 219 (457)
Q Consensus 160 ~~~l~~~~-~~~~~~~ydp~~~~W~~l~~~p~~~----~~~~~~~~~~~----~~~~lyv~GG~-----------~~~~~ 219 (457)
...+|+.. ....+..+||..+.-..+ ..+... ...++ ..+.. ..+.|++..-. .....
T Consensus 24 ~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~-sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~ 101 (334)
T 2p9w_A 24 RQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQM-SGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASS 101 (334)
T ss_dssp TTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEE-EEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCE
T ss_pred CCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCccee-eEEEEeccCCCCcEEEEEcccccccccccccCCCCE
Confidence 35566544 246788899986654344 233210 00011 12333 35778875211 12367
Q ss_pred EEEEECC---CC--cEEe-CCCCCCC-------ccc-eeEEee--CCEEEEEeeecCCCCccceEEEEeCCCCc---EEE
Q 012755 220 IWMYSLI---AN--CWSK-CPQMNLP-------RCL-FGSSSL--GEVAIVAGGTDKNGCILKSAELYNSELGT---WET 280 (457)
Q Consensus 220 v~~yd~~---t~--~W~~-l~~lp~~-------r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~v~~yd~~t~~---W~~ 280 (457)
+.+||+. |+ .|.. ++..... +.. .--.++ +|.+||.+.+. ...++++|+.... |-.
T Consensus 102 v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~-----~~~I~rV~pdG~~~~~~~~ 176 (334)
T 2p9w_A 102 FHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG-----MPAIARVSADGKTVSTFAW 176 (334)
T ss_dssp EEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES-----SCEEEEECTTSCCEEEEEE
T ss_pred EEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC-----CCeEEEEeCCCCEEeeeee
Confidence 9999988 44 3432 2211111 111 111222 68999986643 1468899987543 654
Q ss_pred CCCCCCCCcce-eEEEE-CC-EEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCE--EEEEC
Q 012755 281 LPDMNLPRKLC-SGFFM-DG-KFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPL--VAVVN 355 (457)
Q Consensus 281 ~~~~p~~r~~~-~~~~~-~g-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~--~~~~~ 355 (457)
-.+....+.+. +++.. +| .|++..+ ...+.+||+.+....+++.... |.. ......-. ..-.+
T Consensus 177 ~~~~~~~~~G~nGIv~~pdg~~Liv~~~-------~g~L~~fD~~~pv~~~v~~~~~---G~~--~~~~~~dgilp~~~~ 244 (334)
T 2p9w_A 177 ESGNGGQRPGYSGITFDPHSNKLIAFGG-------PRALTAFDVSKPYAWPEPVKIN---GDF--GTLSGTEKIVTVPVG 244 (334)
T ss_dssp CCCCSSSCCSCSEEEEETTTTEEEEESS-------SSSEEEEECSSSSCCCEECEES---SCC--CCCTTEEEEEEEEET
T ss_pred cCCCcccccCcceEEEeCCCCEEEEEcC-------CCeEEEEcCCCCcceeeccccc---CCc--ccccCcccccccccC
Confidence 33323334434 44444 35 4555532 2457889987432211111000 000 00111122 22369
Q ss_pred CEEEEEecCCCeEEEEECCCCcEEEecc---CCCccCCCCcceEEEEE---eCCEEEEEcCcC
Q 012755 356 NQLYSADQATNVVKKYNKTNNSWTVVKR---LPVRANSFNGWGLAFKA---CGNSLLVIGGHR 412 (457)
Q Consensus 356 g~ly~~gg~~~~v~~Yd~~~~~W~~v~~---~p~~~~~~~~~~~~~~~---~~g~lyv~GG~~ 412 (457)
|++.++....+.++.+--..+ |+.... .|.... ..+...+.++ .+++||++.+..
T Consensus 245 G~vllV~~~~~~~~~l~S~Dg-W~sa~~~g~~~~~~~-~~g~tt~t~~~~~~~~~iYvv~~~f 305 (334)
T 2p9w_A 245 NESVLVGARAPYAISFRSWDN-WKSANIKKTKRSELQ-NSGFTAVADYYQGSEQGLYAVSAFF 305 (334)
T ss_dssp TEEEEEEEETTEEEEEECSST-TSEEEEEEEECGGGG-SSCEEEEEEEEETTEEEEEEEECCG
T ss_pred CEEEEEEcCCCCEEEEECCCC-cceeEEeeeecCccc-cCceeEEEEeccccCCeEEEEeeec
Confidence 998666544455555544444 987542 232211 1233333222 678999998764
No 265
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=83.95 E-value=36 Score=33.81 Aligned_cols=179 Identities=11% Similarity=0.087 Sum_probs=87.9
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPD 283 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~ 283 (457)
++..++.|+.. ..+.+||.....-..+.....+ -.+++. -+++.++.|+.+ ..+.+||...+.-..+..
T Consensus 355 ~g~~l~~~~~d--g~v~~~~~~~~~~~~~~~~~~~--v~~~~~s~dg~~l~~~~~d------~~v~~~~~~~~~~~~~~~ 424 (577)
T 2ymu_A 355 DGQTIASASDD--KTVKLWNRNGQLLQTLTGHSSS--VRGVAFSPDGQTIASASDD------KTVKLWNRNGQLLQTLTG 424 (577)
T ss_dssp TSSEEEEEETT--SEEEEEETTCCEEEEEECCSSC--EEEEEECTTSSCEEEEETT------SEEEEECTTCCEEEEEEC
T ss_pred CCCEEEEEeCC--CEEEEEcCCCCEEEEecCCCCC--eEEEEECCCCCEEEEEeCC------CEEEEEeCCCCEEEEecC
Confidence 55666666543 3577788654433333221111 111222 255666666543 357778854443333221
Q ss_pred CCCCCcceeEEE-ECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEE
Q 012755 284 MNLPRKLCSGFF-MDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYS 360 (457)
Q Consensus 284 ~p~~r~~~~~~~-~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~ 360 (457)
... .-.+++. -++++.+.++.+ ..+..||.....-..+... ......+.+ ++++++
T Consensus 425 ~~~--~v~~~~~s~d~~~l~~~~~d------~~v~~w~~~~~~~~~~~~~-------------~~~v~~~~~spd~~~la 483 (577)
T 2ymu_A 425 HSS--SVWGVAFSPDDQTIASASDD------KTVKLWNRNGQLLQTLTGH-------------SSSVRGVAFSPDGQTIA 483 (577)
T ss_dssp CSS--CEEEEEECTTSSEEEEEETT------SEEEEEETTSCEEEEEECC-------------SSCEEEEEECTTSCEEE
T ss_pred CCC--CeEEEEECCCCCEEEEEcCC------CEEEEEECCCCEEEEEcCC-------------CCCEEEEEEcCCCCEEE
Confidence 111 1111222 256666665532 3577888755443333221 111122222 778888
Q ss_pred EecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEE-EEeCCEEEEEcCcCCCCCceEEEEEeeCC
Q 012755 361 ADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAF-KACGNSLLVIGGHRELQGEIIVLHSWDPT 427 (457)
Q Consensus 361 ~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~-~~~~g~lyv~GG~~~~~~~~~~v~~y~~~ 427 (457)
.++..+.|..||.....-..+..-. ..-..+ ..-++++++.|+.++ .+.+||..
T Consensus 484 s~~~d~~i~iw~~~~~~~~~~~~h~-------~~v~~l~~s~dg~~l~s~~~dg------~v~lwd~~ 538 (577)
T 2ymu_A 484 SASDDKTVKLWNRNGQLLQTLTGHS-------SSVRGVAFSPDGQTIASASDDK------TVKLWNRN 538 (577)
T ss_dssp EEETTSEEEEEETTSCEEEEEECCS-------SCEEEEEECTTSSCEEEEETTS------EEEEECTT
T ss_pred EEeCCCEEEEEcCCCCEEEEEeCCC-------CCEEEEEEcCCCCEEEEEECcC------EEEEEeCC
Confidence 8878888999997654333332111 111112 223677777777653 57788854
No 266
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=83.79 E-value=24 Score=31.63 Aligned_cols=227 Identities=8% Similarity=0.045 Sum_probs=100.2
Q ss_pred EEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCcccee
Q 012755 165 LACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFG 244 (457)
Q Consensus 165 ~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~ 244 (457)
.++..+.+..+|..+.+....-....... .........++..++.|+.+ ..+.+||..+++-.........+ ..
T Consensus 40 Avg~D~tV~iWd~~tg~~~~~~~~~~~~~--~V~~v~~~~~~~~l~sgs~D--g~v~iw~~~~~~~~~~~~~h~~~--~~ 113 (318)
T 4ggc_A 40 AVALDNSVYLWSASSGDILQLLQMEQPGE--YISSVAWIKEGNYLAVGTSS--AEVQLWDVQQQKRLRNMTSHSAR--VG 113 (318)
T ss_dssp EEEETTEEEEEETTTCCEEEEEECCSTTC--CEEEEEECTTSSEEEEEETT--SEEEEEETTTTEEEEEEECCSSC--EE
T ss_pred EEEeCCEEEEEECCCCCEEEEEEecCCCC--eEEEEEECCCCCEEEEEECC--CcEEEeecCCceeEEEecCccce--EE
Confidence 33445677888988876544322211110 00001122356666777643 46888999887643321111111 12
Q ss_pred EEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCc-ceeEEEECCEEEEEeccCCCCCCCceEEEEECCC
Q 012755 245 SSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRK-LCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLET 323 (457)
Q Consensus 245 ~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~-~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t 323 (457)
.....+.+.+.|+.+ ..+..++..+.............. .......+++..+.|+.+ ..+.+||..+
T Consensus 114 ~~~~~~~~l~s~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~ 181 (318)
T 4ggc_A 114 SLSWNSYILSSGSRS------GHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND------NLVNVWPSAP 181 (318)
T ss_dssp EEEEETTEEEEEETT------SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT------SCEEEEESSC
T ss_pred EeecCCCEEEEEecC------CceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecC------cceeEEECCC
Confidence 233345555555533 234445544433221100000111 111112245555555433 3467788876
Q ss_pred CceEE--cCCCCCCCCCCCCCCCCCCCCEEEEE---CCEE-EEE-ecCCCeEEEEECCCCcEEEeccCCCccCCCCcceE
Q 012755 324 RTWKR--IENMYPSNVGTQSNPAMSSPPLVAVV---NNQL-YSA-DQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGL 396 (457)
Q Consensus 324 ~~W~~--~~~~~~~~~~~~~~~~~r~~~~~~~~---~g~l-y~~-gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~ 396 (457)
++-.. ...... .......... ++.+ ++. |...+.+..||.....-.......... ...
T Consensus 182 ~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v-----~~~ 246 (318)
T 4ggc_A 182 GEGGWVPLQTFTQ----------HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQV-----CSI 246 (318)
T ss_dssp BTTBSCCSEEECC----------CCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCE-----EEE
T ss_pred Ccccccceeeecc----------cCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeee-----eee
Confidence 54211 111110 1111111111 2233 333 334567889998887654433222111 112
Q ss_pred EEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 397 AFKACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 397 ~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
.....++.+++.+|.... .+.+||..+.
T Consensus 247 ~~~~~~~~~~~~sg~~d~-----~i~iwd~~~~ 274 (318)
T 4ggc_A 247 LWSPHYKELISGHGFAQN-----QLVIWKYPTM 274 (318)
T ss_dssp EEETTTTEEEEEECTTTC-----CEEEEETTTC
T ss_pred eecccccceEEEEEcCCC-----EEEEEECCCC
Confidence 222335566666554321 4788988763
No 267
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=83.76 E-value=55 Score=35.79 Aligned_cols=219 Identities=13% Similarity=0.010 Sum_probs=109.4
Q ss_pred ccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCcEEeCCCCCC---C------c
Q 012755 170 MPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNL---P------R 240 (457)
Q Consensus 170 ~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~---~------r 240 (457)
..+|.+|+....-..+..... ........++..++++. ...++.+|..+..-..+..-.. + .
T Consensus 226 ~~l~~~~~~g~~~~~l~~~~~------~~~~~~SpDG~~la~~~---~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~ 296 (1045)
T 1k32_A 226 GQIYSTDLDGKDLRKHTSFTD------YYPRHLNTDGRRILFSK---GGSIYIFNPDTEKIEKIEIGDLESPEDRIISIP 296 (1045)
T ss_dssp CEEEEEETTSCSCEECCCCCS------SCEEEEEESSSCEEEEE---TTEEEEECTTTCCEEECCCCCCCBCCSEEEECG
T ss_pred eEEEEEeCCCCcceEecCCCC------cceeeEcCCCCEEEEEe---CCEEEEecCCceEeeeeccCccccccccccccc
Confidence 356666765554444432211 00112345555444442 4578888886665554432100 0 0
Q ss_pred cceeEE-e-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEE-
Q 012755 241 CLFGSS-S-LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGE- 317 (457)
Q Consensus 241 ~~~~~~-~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~- 317 (457)
....++ . -+++..+++. ...++++|..++.-..+...+..+....... +|+.+++++. ...++
T Consensus 297 ~v~~~~~S~pdG~~la~~~-------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~------~~~l~~ 362 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-------RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR------EGDFLG 362 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-------TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET------TEEEEE
T ss_pred ccceeeecCCCCCEEEEEE-------cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC------CCceEE
Confidence 111222 2 3444444433 2467888888877666543222111111223 6654444332 24677
Q ss_pred EEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcce
Q 012755 318 EYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWG 395 (457)
Q Consensus 318 ~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~ 395 (457)
.||..++.-..+.. .. .....+.. +|+.++++...+.++.||.++++-..+..-.... ...
T Consensus 363 ~~d~~~~~~~~l~~-~~------------~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~----v~~ 425 (1045)
T 1k32_A 363 IYDYRTGKAEKFEE-NL------------GNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAM----ITD 425 (1045)
T ss_dssp EEETTTCCEEECCC-CC------------CSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSC----CCC
T ss_pred EEECCCCCceEecC-Cc------------cceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCC----ccc
Confidence 89998887666541 11 11122222 6776667767789999999998776664211111 011
Q ss_pred EEEEEeCCEEEEEcCcCC----CCCceEEEEEeeCCCC
Q 012755 396 LAFKACGNSLLVIGGHRE----LQGEIIVLHSWDPTDG 429 (457)
Q Consensus 396 ~~~~~~~g~lyv~GG~~~----~~~~~~~v~~y~~~~~ 429 (457)
++ ..-+|+.+++++..+ .......+++||..+.
T Consensus 426 ~~-~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g 462 (1045)
T 1k32_A 426 FT-ISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR 462 (1045)
T ss_dssp EE-ECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT
T ss_pred eE-ECCCCCeEEEEecCccccccCCCCCeEEEEECCCC
Confidence 22 234666555554322 0112357889998764
No 268
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=83.63 E-value=11 Score=36.47 Aligned_cols=102 Identities=6% Similarity=-0.045 Sum_probs=51.7
Q ss_pred EEEEeeecCCCCccceEEEEeCCCC---cEEE--CCCCCCCCc-ceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCC
Q 012755 252 AIVAGGTDKNGCILKSAELYNSELG---TWET--LPDMNLPRK-LCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLET 323 (457)
Q Consensus 252 iyv~GG~~~~~~~~~~v~~yd~~t~---~W~~--~~~~p~~r~-~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t 323 (457)
+++.|+.+ ..+.+||..+. .+.. ......... -..++.. ++.+++.++. ...+.+||+.+
T Consensus 196 ~l~s~~~d------g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~------dg~i~i~d~~~ 263 (430)
T 2xyi_A 196 YLLSASDD------HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD------DQKLMIWDTRN 263 (430)
T ss_dssp EEEEECTT------SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEET------TSEEEEEETTC
T ss_pred eEEEEeCC------CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeC------CCeEEEEECCC
Confidence 66666543 45788888762 1211 111111111 1222222 4556666653 24688899886
Q ss_pred Cc-eEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CC-EEEEEecCCCeEEEEECCC
Q 012755 324 RT-WKRIENMYPSNVGTQSNPAMSSPPLVAVV--NN-QLYSADQATNVVKKYNKTN 375 (457)
Q Consensus 324 ~~-W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g-~ly~~gg~~~~v~~Yd~~~ 375 (457)
.. ...+..... .......+.. ++ .+++.|+..+.|..||..+
T Consensus 264 ~~~~~~~~~~~~----------~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~ 309 (430)
T 2xyi_A 264 NNTSKPSHTVDA----------HTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 309 (430)
T ss_dssp SCSSSCSEEEEC----------CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred CCCCcceeEeec----------CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCC
Confidence 52 111111111 1122223333 23 4788888888999999876
No 269
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=83.48 E-value=26 Score=34.58 Aligned_cols=145 Identities=10% Similarity=0.011 Sum_probs=76.1
Q ss_pred eEEeCCEEEEEceecCCcEEEEEECCCC---------cEEeCCCCCCCccceeEEe-eCCEEEEEeeecCCCCccceEEE
Q 012755 201 SLAVGTQLLVFGRELSGFAIWMYSLIAN---------CWSKCPQMNLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAEL 270 (457)
Q Consensus 201 ~~~~~~~lyv~GG~~~~~~v~~yd~~t~---------~W~~l~~lp~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~ 270 (457)
+....+.+|+|-|. .+|+++.... .|..+ |.. ...+... .++++|+|-| +..|+
T Consensus 268 i~~~~ge~y~Fkg~----~~wr~~~~~~~~~p~~I~~~Wp~L---P~~-iDAa~~~~~~g~~~fFKg--------~~~W~ 331 (450)
T 1su3_A 268 ITTIRGEVMFFKDR----FYMRTNPFYPEVELNFISVFWPQL---PNG-LEAAYEFADRDEVRFFKG--------NKYWA 331 (450)
T ss_dssp EEEETTEEEEEETT----EEEECCTTSSSCEEEEGGGTCTTS---CSS-CCEEEEEGGGTEEEEEET--------TEEEE
T ss_pred EEecCCeEEEEeCC----EEEEEcCCCCcccceehhHhccCC---CCC-eeEEEEEcCCCeEEEEeC--------CEEEE
Confidence 45689999998763 4566654432 34333 322 1111111 3689999865 35667
Q ss_pred EeCCCCc--E-EECC---CCCCCCcceeEE-EE--CCEEEEEeccCCCCCCCceEEEEECCCCceE-----EcCCCCCCC
Q 012755 271 YNSELGT--W-ETLP---DMNLPRKLCSGF-FM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWK-----RIENMYPSN 336 (457)
Q Consensus 271 yd~~t~~--W-~~~~---~~p~~r~~~~~~-~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~-----~~~~~~~~~ 336 (457)
|+..+-. + +.+. .+|.....-.+| .. ++++|++-| +..++||..+++-. .+....+
T Consensus 332 ~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG--------~~yw~yd~~~~~~~~gYPk~I~~~fp-- 401 (450)
T 1su3_A 332 VQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA--------NKYWRYDEYKRSMDPGYPKMIAHDFP-- 401 (450)
T ss_dssp EETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET--------TEEEEEETTTTEECSSCSEEHHHHST--
T ss_pred ecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC--------CEEEEEeCCCccccCCCCcchhhcCC--
Confidence 7643210 0 0010 122111122233 33 689999965 35788987654311 1110000
Q ss_pred CCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCcEE
Q 012755 337 VGTQSNPAMSSPPLVAVVNNQLYSADQATNVVKKYNKTNNSWT 379 (457)
Q Consensus 337 ~~~~~~~~~r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~~W~ 379 (457)
-.+...-+++..+|++|.+-| +..|+||..+++=.
T Consensus 402 ------gip~~iDAA~~~~g~~YFFkg--~~ywr~d~~~~~v~ 436 (450)
T 1su3_A 402 ------GIGHKVDAVFMKDGFFYFFHG--TRQYKFDPKTKRIL 436 (450)
T ss_dssp ------TSCSCCSEEEEETTEEEEEET--TEEEEEETTTTEEE
T ss_pred ------CCCCCccEEEEcCCeEEEEeC--CEEEEEECCcceEe
Confidence 002223345567899999965 57899999876533
No 270
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=83.03 E-value=17 Score=37.84 Aligned_cols=145 Identities=9% Similarity=0.053 Sum_probs=81.7
Q ss_pred CcEEEEEECCCC--cEEeCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCC---cEEECCCCCCCCcce
Q 012755 217 GFAIWMYSLIAN--CWSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELG---TWETLPDMNLPRKLC 291 (457)
Q Consensus 217 ~~~v~~yd~~t~--~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~---~W~~~~~~p~~r~~~ 291 (457)
.+.++++|..+. .|+.+.+-..... ......++.+|+....+. ....+...|..+. .|+.+-+-.... .
T Consensus 258 ~~~i~~~d~~~~~~~~~~l~~~~~~~~-~~~~~~g~~l~~~t~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~- 331 (693)
T 3iuj_A 258 GNRLYVKDLSQENAPLLTVQGDLDADV-SLVDNKGSTLYLLTNRDA---PNRRLVTVDAANPGPAHWRDLIPERQQV-L- 331 (693)
T ss_dssp CCEEEEEETTSTTCCCEEEECSSSSCE-EEEEEETTEEEEEECTTC---TTCEEEEEETTSCCGGGCEEEECCCSSC-E-
T ss_pred CcEEEEEECCCCCCceEEEeCCCCceE-EEEeccCCEEEEEECCCC---CCCEEEEEeCCCCCccccEEEecCCCCE-E-
Confidence 358999998765 6777643221111 123455888988865432 2467889998764 388753322221 1
Q ss_pred eEEEECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE----C-CEEEEEec---
Q 012755 292 SGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV----N-NQLYSADQ--- 363 (457)
Q Consensus 292 ~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~----~-g~ly~~gg--- 363 (457)
.....++.|++....+ ....++.+|+.+.....+.- +. .. .+..+ + +.|++...
T Consensus 332 ~~s~~g~~lv~~~~~~----g~~~l~~~d~~g~~~~~l~~-p~----------~~---~~~~~~~~~d~~~l~~~~ss~~ 393 (693)
T 3iuj_A 332 TVHSGSGYLFAEYMVD----ATARVEQFDYEGKRVREVAL-PG----------LG---SVSGFNGKHDDPALYFGFENYA 393 (693)
T ss_dssp EEEEETTEEEEEEEET----TEEEEEEECTTSCEEEEECC-SS----------SS---EEEECCCCTTCSCEEEEEECSS
T ss_pred EEEEECCEEEEEEEEC----CeeEEEEEECCCCeeEEeec-CC----------Cc---eEEeeecCCCCCEEEEEecCCC
Confidence 3344466666543322 13468889988665555532 11 00 11111 2 34444432
Q ss_pred CCCeEEEEECCCCcEEEeccCC
Q 012755 364 ATNVVKKYNKTNNSWTVVKRLP 385 (457)
Q Consensus 364 ~~~~v~~Yd~~~~~W~~v~~~p 385 (457)
....++.||.++++++.+...+
T Consensus 394 tP~~l~~~d~~~g~~~~l~~~~ 415 (693)
T 3iuj_A 394 QPPTLYRFEPKSGAISLYRASA 415 (693)
T ss_dssp SCCEEEEECTTTCCEEEEECCC
T ss_pred CCCEEEEEECCCCeEEEEEeCC
Confidence 2468999999999888776443
No 271
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=82.75 E-value=30 Score=31.96 Aligned_cols=62 Identities=16% Similarity=0.167 Sum_probs=32.1
Q ss_pred CCEEEEEeeecCCCCccceEEEEeCCCCcEEE-CCCCCCCCcceeEEE-ECCEEEEEeccCCCCCCCceEEEEECCCC
Q 012755 249 GEVAIVAGGTDKNGCILKSAELYNSELGTWET-LPDMNLPRKLCSGFF-MDGKFYIIGGMSSPTDPLTCGEEYNLETR 324 (457)
Q Consensus 249 ~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~-~~~~p~~r~~~~~~~-~~g~iyv~GG~~~~~~~~~~~~~yd~~t~ 324 (457)
++.+.+.|+.+ ..+.++|..+++... +..-. ..-.+++. -+++..+.||.+ ..+..||....
T Consensus 87 ~~~~l~s~s~D------~~v~lwd~~~~~~~~~~~~h~--~~v~~v~~sp~~~~l~s~~~d------~~i~~wd~~~~ 150 (343)
T 2xzm_R 87 ENCFAISSSWD------KTLRLWDLRTGTTYKRFVGHQ--SEVYSVAFSPDNRQILSAGAE------REIKLWNILGE 150 (343)
T ss_dssp STTEEEEEETT------SEEEEEETTSSCEEEEEECCC--SCEEEEEECSSTTEEEEEETT------SCEEEEESSSC
T ss_pred CCCEEEEEcCC------CcEEEEECCCCcEEEEEcCCC--CcEEEEEECCCCCEEEEEcCC------CEEEEEeccCC
Confidence 45566666643 468889998876432 21111 11112222 255555666543 35677887643
No 272
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=81.69 E-value=34 Score=32.11 Aligned_cols=135 Identities=11% Similarity=0.009 Sum_probs=69.5
Q ss_pred ceEEEEeCCCCcEEECCCCCCCCcceeEEE-ECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCC
Q 012755 266 KSAELYNSELGTWETLPDMNLPRKLCSGFF-MDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPA 344 (457)
Q Consensus 266 ~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~ 344 (457)
..+.++|+.+.+-....... ..-.+++. -+|++.+.++. ..+.+++..++.-........
T Consensus 157 ~~i~iwd~~~~~~~~~~~~~--~~V~~v~fspdg~~l~s~s~-------~~~~~~~~~~~~~~~~~~~~~---------- 217 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIETR--GEVKDLHFSTDGKVVAYITG-------SSLEVISTVTGSCIARKTDFD---------- 217 (365)
T ss_dssp CEEEEEETTTTEEEEEEECS--SCCCEEEECTTSSEEEEECS-------SCEEEEETTTCCEEEEECCCC----------
T ss_pred CEEEEeECCCCcEEEEeCCC--CceEEEEEccCCceEEeccc-------eeEEEEEeccCcceeeeecCC----------
Confidence 56888999888754432211 11122222 26666665542 235677777766543222111
Q ss_pred CCCCC--EEEEECCEEEEEecCCC----eEEEEECCCCcEEEecc--CCCccCCCCcceEEE-EEeCCEEEEEcCcCCCC
Q 012755 345 MSSPP--LVAVVNNQLYSADQATN----VVKKYNKTNNSWTVVKR--LPVRANSFNGWGLAF-KACGNSLLVIGGHRELQ 415 (457)
Q Consensus 345 ~r~~~--~~~~~~g~ly~~gg~~~----~v~~Yd~~~~~W~~v~~--~p~~~~~~~~~~~~~-~~~~g~lyv~GG~~~~~ 415 (457)
..... ....-+++.++.++..+ .++.+|........... +.... ..-.++ ..-+|++++.|+.++
T Consensus 218 ~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~----~~V~~~~~Spdg~~lasgs~D~-- 291 (365)
T 4h5i_A 218 KNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRF----KGITSMDVDMKGELAVLASNDN-- 291 (365)
T ss_dssp TTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSC----SCEEEEEECTTSCEEEEEETTS--
T ss_pred CCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCC----CCeEeEEECCCCCceEEEcCCC--
Confidence 11111 11234787777664322 57778877666544321 11111 111112 233788888888764
Q ss_pred CceEEEEEeeCCCC
Q 012755 416 GEIIVLHSWDPTDG 429 (457)
Q Consensus 416 ~~~~~v~~y~~~~~ 429 (457)
.|.+||.++.
T Consensus 292 ----~V~iwd~~~~ 301 (365)
T 4h5i_A 292 ----SIALVKLKDL 301 (365)
T ss_dssp ----CEEEEETTTT
T ss_pred ----EEEEEECCCC
Confidence 4888998873
No 273
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=81.19 E-value=26 Score=30.18 Aligned_cols=143 Identities=13% Similarity=0.072 Sum_probs=74.6
Q ss_pred eEEeCCEEEEEceecCCcEEEEEECCCCc--E-EeC----CCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeC
Q 012755 201 SLAVGTQLLVFGRELSGFAIWMYSLIANC--W-SKC----PQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNS 273 (457)
Q Consensus 201 ~~~~~~~lyv~GG~~~~~~v~~yd~~t~~--W-~~l----~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~ 273 (457)
+....+.+|+|-|. .+|+++..... . +.+ +.+|. .-..+....++++|+|-| +..++||.
T Consensus 11 ~~~~~g~~~fFkg~----~~w~~~~~~~~~gyP~~I~~~w~glP~-~iDAa~~~~~g~~yfFkg--------~~yw~~~~ 77 (196)
T 3c7x_A 11 VAMLRGEMFVFKER----WFWRVRNNQVMDGYPMPIGQFWRGLPA-SINTAYERKDGKFVFFKG--------DKHWVFDE 77 (196)
T ss_dssp EEEETTEEEEEETT----EEEEEETTEECTTCSEEHHHHSTTCCS-SCCEEEECTTSCEEEEET--------TEEEEEET
T ss_pred EEEcCCEEEEEECC----EEEEEECCccCCCCceEhhHhccCCCC-CccEEEEeCCCcEEEecC--------CEEEEEeC
Confidence 34678999998763 57777643100 0 011 23343 222222224788999965 45688875
Q ss_pred CCCcE---EECC----CCCCCCcceeEEE-E--CCEEEEEeccCCCCCCCceEEEEECCCCceE-----EcCCCCCCCCC
Q 012755 274 ELGTW---ETLP----DMNLPRKLCSGFF-M--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWK-----RIENMYPSNVG 338 (457)
Q Consensus 274 ~t~~W---~~~~----~~p~~r~~~~~~~-~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~-----~~~~~~~~~~~ 338 (457)
.+... +.+. .+|.. ...+|. . ++++|.+-| +..++||..+++=. .+...+.
T Consensus 78 ~~~~~gyPk~I~~~~~glP~~--~IDAA~~~~~~g~~yfFkG--------~~yw~yd~~~~~v~~gyPk~i~~~~g---- 143 (196)
T 3c7x_A 78 ASLEPGYPKHIKELGRGLPTD--KIDAALFWMPNGKTYFFRG--------NKYYRFNEELRAVDSEYPKNIKVWEG---- 143 (196)
T ss_dssp TEECTTCSEEGGGTCBSCCSS--CCSEEEEETTTTEEEEEET--------TEEEEEETTTTEECTTCSEEGGGSBT----
T ss_pred CcccCCCCeEhhhcCCCCCCC--cccEEEEEccCCEEEEEEC--------CEEEEEeCCcccccCCCCccHHHCCC----
Confidence 42110 1121 13322 223333 2 689999965 34688998765321 1111100
Q ss_pred CCCCCCCCCCCEEEEE-CC-EEEEEecCCCeEEEEECCCCc
Q 012755 339 TQSNPAMSSPPLVAVV-NN-QLYSADQATNVVKKYNKTNNS 377 (457)
Q Consensus 339 ~~~~~~~r~~~~~~~~-~g-~ly~~gg~~~~v~~Yd~~~~~ 377 (457)
. +....++... ++ ++|++-| +..|.||..+++
T Consensus 144 i-----p~~idaAf~~~~~~~~YfFkg--~~y~r~d~~~~~ 177 (196)
T 3c7x_A 144 I-----PESPRGSFMGSDEVFTYFYKG--NKYWKFNNQKLK 177 (196)
T ss_dssp C-----CSSCSEEEECTTSSEEEEEET--TEEEEEETTTTE
T ss_pred c-----CCCcceeEEecCCCEEEEEEC--CEEEEEECCcce
Confidence 0 1122333333 44 8999965 688999998764
No 274
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=80.55 E-value=23 Score=37.21 Aligned_cols=159 Identities=8% Similarity=-0.068 Sum_probs=86.9
Q ss_pred eCC-EEEEEceec--CCcEEEEEECCCC--c-EEeCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCC--
Q 012755 204 VGT-QLLVFGREL--SGFAIWMYSLIAN--C-WSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSEL-- 275 (457)
Q Consensus 204 ~~~-~lyv~GG~~--~~~~v~~yd~~t~--~-W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t-- 275 (457)
.+| .|++..... ..+.++++|..+. + |+.+.+-...... .+..-++.||+....+. ....++++|..+
T Consensus 277 pDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~-~~~~dg~~l~~~s~~~~---~~~~l~~~d~~~~~ 352 (741)
T 1yr2_A 277 SDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWD-FVDGVGDQLWFVSGDGA---PLKKIVRVDLSGST 352 (741)
T ss_dssp TTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEE-EEEEETTEEEEEECTTC---TTCEEEEEECSSSS
T ss_pred CCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEE-EEeccCCEEEEEECCCC---CCCEEEEEeCCCCc
Confidence 355 444444332 3568999999877 6 8777432222211 12345777777654321 246789999988
Q ss_pred CcEEECCCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-
Q 012755 276 GTWETLPDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV- 354 (457)
Q Consensus 276 ~~W~~~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~- 354 (457)
..|+.+-+-... ........++.+++....++ ...++.+|+....-..+.. +. ......+..
T Consensus 353 ~~~~~l~~~~~~-~l~~~~~~~~~lv~~~~~dg----~~~l~~~~~~g~~~~~l~~-~~-----------~~~v~~~~~s 415 (741)
T 1yr2_A 353 PRFDTVVPESKD-NLESVGIAGNRLFASYIHDA----KSQVLAFDLDGKPAGAVSL-PG-----------IGSASGLSGR 415 (741)
T ss_dssp CEEEEEECCCSS-EEEEEEEEBTEEEEEEEETT----EEEEEEEETTSCEEEECBC-SS-----------SCEEEEEECC
T ss_pred cccEEEecCCCC-eEEEEEEECCEEEEEEEECC----EEEEEEEeCCCCceeeccC-CC-----------CeEEEEeecC
Confidence 579887432211 11223344788887764432 3467888875544444431 11 011111111
Q ss_pred -CC-EEEEEec---CCCeEEEEECCCCcEEEecc
Q 012755 355 -NN-QLYSADQ---ATNVVKKYNKTNNSWTVVKR 383 (457)
Q Consensus 355 -~g-~ly~~gg---~~~~v~~Yd~~~~~W~~v~~ 383 (457)
++ .|++... ....++.||..+++.+.+..
T Consensus 416 ~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~~ 449 (741)
T 1yr2_A 416 PGDRHAYLSFSSFTQPATVLALDPATAKTTPWEP 449 (741)
T ss_dssp BTCSCEEEEEEETTEEEEEEEEETTTTEEEECSC
T ss_pred CCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEec
Confidence 33 3444322 24579999999988777654
No 275
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=78.96 E-value=38 Score=30.85 Aligned_cols=143 Identities=10% Similarity=0.035 Sum_probs=72.4
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEe-CCCCCCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSK-CPQMNLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLP 282 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~-l~~lp~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~ 282 (457)
++..++.|+.+ ..+.+||..+++-.. +..-. ..-.+++. -++.+++.|+.+ ..+.++|.....-..+.
T Consensus 76 dg~~l~s~s~D--~~v~~wd~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~s~s~D------~~i~vwd~~~~~~~~~~ 145 (319)
T 3frx_A 76 DGAYALSASWD--KTLRLWDVATGETYQRFVGHK--SDVMSVDIDKKASMIISGSRD------KTIKVWTIKGQCLATLL 145 (319)
T ss_dssp TSSEEEEEETT--SEEEEEETTTTEEEEEEECCS--SCEEEEEECTTSCEEEEEETT------SCEEEEETTSCEEEEEC
T ss_pred CCCEEEEEeCC--CEEEEEECCCCCeeEEEccCC--CcEEEEEEcCCCCEEEEEeCC------CeEEEEECCCCeEEEEe
Confidence 55566666543 468899998875322 21111 11112222 255666777654 35777887655433332
Q ss_pred CCCCCCcceeEEEE-------CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-
Q 012755 283 DMNLPRKLCSGFFM-------DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV- 354 (457)
Q Consensus 283 ~~p~~r~~~~~~~~-------~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~- 354 (457)
.-.. .-...... ++.+++.|+.+ ..+..||+.+.+-... +.. .......+.+
T Consensus 146 ~h~~--~v~~~~~~~~~~~~~~~~~l~s~~~d------~~i~~wd~~~~~~~~~--~~~----------h~~~v~~~~~s 205 (319)
T 3frx_A 146 GHND--WVSQVRVVPNEKADDDSVTIISAGND------KMVKAWNLNQFQIEAD--FIG----------HNSNINTLTAS 205 (319)
T ss_dssp CCSS--CEEEEEECCC------CCEEEEEETT------SCEEEEETTTTEEEEE--ECC----------CCSCEEEEEEC
T ss_pred ccCC--cEEEEEEccCCCCCCCccEEEEEeCC------CEEEEEECCcchhhee--ecC----------CCCcEEEEEEc
Confidence 1111 01111111 22344555432 3577888877543221 111 1111122222
Q ss_pred -CCEEEEEecCCCeEEEEECCCCc
Q 012755 355 -NNQLYSADQATNVVKKYNKTNNS 377 (457)
Q Consensus 355 -~g~ly~~gg~~~~v~~Yd~~~~~ 377 (457)
++++++.|+..+.|..||..+.+
T Consensus 206 p~g~~l~s~~~dg~i~iwd~~~~~ 229 (319)
T 3frx_A 206 PDGTLIASAGKDGEIMLWNLAAKK 229 (319)
T ss_dssp TTSSEEEEEETTCEEEEEETTTTE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCc
Confidence 67778888888899999998764
No 276
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=78.27 E-value=67 Score=33.25 Aligned_cols=186 Identities=13% Similarity=0.053 Sum_probs=93.8
Q ss_pred cEEEEEECCCCcEE--eCCCCC-CCccceeEE-eeCCEEEEEeeecCCCCccceEEEEeCCC------C--cEEECCCCC
Q 012755 218 FAIWMYSLIANCWS--KCPQMN-LPRCLFGSS-SLGEVAIVAGGTDKNGCILKSAELYNSEL------G--TWETLPDMN 285 (457)
Q Consensus 218 ~~v~~yd~~t~~W~--~l~~lp-~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~v~~yd~~t------~--~W~~~~~~p 285 (457)
..+++++..+.+.. .+...+ .+....... .-+++..+++..... .....++++|..+ + .++.+....
T Consensus 208 ~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~ 286 (710)
T 2xdw_A 208 QKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGC-DPVNRLWYCDLQQESNGITGILKWVKLIDNF 286 (710)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSS-SSCCEEEEEEGGGSSSSSCSSCCCEEEECSS
T ss_pred CEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccC-CCccEEEEEECcccccccCCccceEEeeCCC
Confidence 46899998887632 111111 122222222 224544444433221 1146889999876 4 577764322
Q ss_pred CCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCC---ceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-CCEEEEE
Q 012755 286 LPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETR---TWKRIENMYPSNVGTQSNPAMSSPPLVAVV-NNQLYSA 361 (457)
Q Consensus 286 ~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~---~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~g~ly~~ 361 (457)
... ......-++.||+.+..+. ....++.+|+.+. .|+.+..... ......+... ++.+++.
T Consensus 287 ~~~-~~~~s~dg~~l~~~s~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~~----------~~~~~~~~~~~~~~lv~~ 352 (710)
T 2xdw_A 287 EGE-YDYVTNEGTVFTFKTNRHS---PNYRLINIDFTDPEESKWKVLVPEHE----------KDVLEWVACVRSNFLVLC 352 (710)
T ss_dssp SSC-EEEEEEETTEEEEEECTTC---TTCEEEEEETTSCCGGGCEEEECCCS----------SCEEEEEEEETTTEEEEE
T ss_pred CcE-EEEEeccCCEEEEEECCCC---CCCEEEEEeCCCCCcccceeccCCCC----------CCeEEEEEEEcCCEEEEE
Confidence 221 1122234677888765322 2457889998876 4887754222 1111234445 6777776
Q ss_pred ecC--CCeEEEEECCCCc-EEEeccCCCccCCCCcceEEEEE-eCC-EEEEEc-CcCCCCCceEEEEEeeCCCC
Q 012755 362 DQA--TNVVKKYNKTNNS-WTVVKRLPVRANSFNGWGLAFKA-CGN-SLLVIG-GHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 362 gg~--~~~v~~Yd~~~~~-W~~v~~~p~~~~~~~~~~~~~~~-~~g-~lyv~G-G~~~~~~~~~~v~~y~~~~~ 429 (457)
... ...++.+|+.+++ .+.+. .+ . +....+.. -++ .|++.. +...+ ..++.||..++
T Consensus 353 ~~~~g~~~l~~~~~~~g~~~~~l~-~~--~----~~v~~~~~s~d~~~l~~~~ss~~~P----~~i~~~d~~tg 415 (710)
T 2xdw_A 353 YLHDVKNTLQLHDLATGALLKIFP-LE--V----GSVVGYSGQKKDTEIFYQFTSFLSP----GIIYHCDLTKE 415 (710)
T ss_dssp EEETTEEEEEEEETTTCCEEEEEC-CC--S----SEEEEEECCTTCSEEEEEEECSSCC----CEEEEEETTSS
T ss_pred EEECCEEEEEEEECCCCCEEEecC-CC--C----ceEEEEecCCCCCEEEEEEeCCCCC----CEEEEEECCCC
Confidence 533 3468899985554 44443 22 1 11111211 133 455443 32222 37889998774
No 277
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=77.68 E-value=58 Score=32.22 Aligned_cols=179 Identities=11% Similarity=0.120 Sum_probs=88.5
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPD 283 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~ 283 (457)
++..++.|+.. ..+.+||..+..-..+.....+ -.+++. -+++.++.|+.+ ..+.+||.....-..+..
T Consensus 314 ~~~~l~t~~~d--~~i~~w~~~~~~~~~~~~~~~~--v~~~~~s~~g~~l~~~~~d------g~v~~~~~~~~~~~~~~~ 383 (577)
T 2ymu_A 314 DGQTIASASDD--KTVKLWNRNGQHLQTLTGHSSS--VWGVAFSPDGQTIASASDD------KTVKLWNRNGQLLQTLTG 383 (577)
T ss_dssp TSSEEEEEETT--SCEEEEETTSCEEEEECCCSSC--EEEEEECTTSSEEEEEETT------SEEEEEETTCCEEEEEEC
T ss_pred CCCEEEEEeCC--CeEEEEeCCCCeeEEEeCCCCC--EEEEEECCCCCEEEEEeCC------CEEEEEcCCCCEEEEecC
Confidence 45555555543 3467778766654444322111 122222 256666666533 357778865544433322
Q ss_pred CCCCCcceeEEE--ECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEE
Q 012755 284 MNLPRKLCSGFF--MDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLY 359 (457)
Q Consensus 284 ~p~~r~~~~~~~--~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly 359 (457)
.. .....+. -+++..+.|+.+ ..+..||.....-..+... ......+.+ +++++
T Consensus 384 ~~---~~v~~~~~s~dg~~l~~~~~d------~~v~~~~~~~~~~~~~~~~-------------~~~v~~~~~s~d~~~l 441 (577)
T 2ymu_A 384 HS---SSVRGVAFSPDGQTIASASDD------KTVKLWNRNGQLLQTLTGH-------------SSSVWGVAFSPDDQTI 441 (577)
T ss_dssp CS---SCEEEEEECTTSSCEEEEETT------SEEEEECTTCCEEEEEECC-------------SSCEEEEEECTTSSEE
T ss_pred CC---CCeEEEEECCCCCEEEEEeCC------CEEEEEeCCCCEEEEecCC-------------CCCeEEEEECCCCCEE
Confidence 11 1111222 256666665532 3577788544332322211 111112222 67777
Q ss_pred EEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCC
Q 012755 360 SADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPT 427 (457)
Q Consensus 360 ~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~ 427 (457)
+.++..+.+..||.....-..+....... ......-++++++.|+.++ .+.+||.+
T Consensus 442 ~~~~~d~~v~~w~~~~~~~~~~~~~~~~v------~~~~~spd~~~las~~~d~------~i~iw~~~ 497 (577)
T 2ymu_A 442 ASASDDKTVKLWNRNGQLLQTLTGHSSSV------RGVAFSPDGQTIASASDDK------TVKLWNRN 497 (577)
T ss_dssp EEEETTSEEEEEETTSCEEEEEECCSSCE------EEEEECTTSCEEEEEETTS------EEEEEETT
T ss_pred EEEcCCCEEEEEECCCCEEEEEcCCCCCE------EEEEEcCCCCEEEEEeCCC------EEEEEcCC
Confidence 77777788999998765544443221111 0111223677777776553 47777754
No 278
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=77.43 E-value=9.3 Score=33.92 Aligned_cols=145 Identities=8% Similarity=0.008 Sum_probs=72.6
Q ss_pred CCEEEEEceecCCcEEEEEECC---------------CCcEEeCCCCC--CCccceeEEeeCCEEEEEeeecCCCCccce
Q 012755 205 GTQLLVFGRELSGFAIWMYSLI---------------ANCWSKCPQMN--LPRCLFGSSSLGEVAIVAGGTDKNGCILKS 267 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~---------------t~~W~~l~~lp--~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 267 (457)
++.+|+|-|. .+|+++.. +..|..+|... ......+.-..++++|+|-| ..
T Consensus 15 ~ge~yfFkg~----~~wr~~~~~~~~~~~~~~~P~~I~~~W~~Lp~~~f~p~~iDaaf~~~~g~~~fFKg--------~~ 82 (227)
T 3lp9_A 15 NNEAYFFIND----KYVLLDYAPGSSRDKVLYGPTPVRDGFKSLNQTIFGSYGIDCSFDTENNEAFIFYE--------NF 82 (227)
T ss_dssp TTEEEEEETT----EEEEEECCTTSSCCEEEEEEEEHHHHSGGGTTSHHHHHCCSEEEECSTTEEEEEET--------TE
T ss_pred CCeEEEEECC----EEEEEeCCCCCccccccCCceEHhhcCCcCCcccCCCCCceEEEECCCCEEEEEeC--------CE
Confidence 6888888652 45665542 23355554221 11222222236899999966 46
Q ss_pred EEEEe--CCC-------------CcEEECCCCCCCCcceeEEEE---CCEEEEEeccCCCCCCCceEEEEECCCCceE--
Q 012755 268 AELYN--SEL-------------GTWETLPDMNLPRKLCSGFFM---DGKFYIIGGMSSPTDPLTCGEEYNLETRTWK-- 327 (457)
Q Consensus 268 v~~yd--~~t-------------~~W~~~~~~p~~r~~~~~~~~---~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~-- 327 (457)
.|+|+ +.+ ..|..+|.-..+. ...+|.. ++++|++-| +..++||..+++=.
T Consensus 83 ~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~-~IDAA~~~~~~~k~yfFkG--------~~yw~~d~~~~~~~~g 153 (227)
T 3lp9_A 83 CALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFES-GIDAAYRSTRGKEVYLFKG--------DQYARIDYGSNSMVNK 153 (227)
T ss_dssp EEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTT-CCSEEEECSSTTEEEEEET--------TEEEEEETTTTEESSS
T ss_pred EEEEeCCCCccccccccCceEHhhhcCCCCCccCCC-cccEEEEECCCCEEEEEEC--------CEEEEEeCCCccccCC
Confidence 77777 321 1132222110011 1223332 689999965 35788997754311
Q ss_pred ---EcC-CCCCCCCCCCCCCCCCCCCEEEE--ECCEEEEEecCCCeEEEEECCCC
Q 012755 328 ---RIE-NMYPSNVGTQSNPAMSSPPLVAV--VNNQLYSADQATNVVKKYNKTNN 376 (457)
Q Consensus 328 ---~~~-~~~~~~~~~~~~~~~r~~~~~~~--~~g~ly~~gg~~~~v~~Yd~~~~ 376 (457)
.+. ..|.. .+.+ .+....++.. .+|++|++-| +..|.||..++
T Consensus 154 yPk~i~~g~p~~-~~~g---~p~~iDAA~~~~~~g~~YfFkg--~~Ywr~d~~~~ 202 (227)
T 3lp9_A 154 EIKSISSGYPCF-RNTI---FESGADAAFASHKTNEVYFFKD--DHYARVKVTPX 202 (227)
T ss_dssp SCEEHHHHCGGG-TTSG---GGGCCSEEEECSSTTEEEEEET--TEEEEEECCSS
T ss_pred CCeEHHHCCCCc-cccc---cCCCccEEEEcCCCceEEEEEC--CEEEEEECCcc
Confidence 111 01100 0000 0122223333 2589999966 68999998876
No 279
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=76.78 E-value=39 Score=29.75 Aligned_cols=63 Identities=14% Similarity=0.130 Sum_probs=37.6
Q ss_pred CCEEEEEecCCCeEEEEECCCCcEEE----ec-cCCCcc--CCCCcceEEEEE-eCCEEEEEcCcCCCCCceEEEEEeeC
Q 012755 355 NNQLYSADQATNVVKKYNKTNNSWTV----VK-RLPVRA--NSFNGWGLAFKA-CGNSLLVIGGHRELQGEIIVLHSWDP 426 (457)
Q Consensus 355 ~g~ly~~gg~~~~v~~Yd~~~~~W~~----v~-~~p~~~--~~~~~~~~~~~~-~~g~lyv~GG~~~~~~~~~~v~~y~~ 426 (457)
++++|++-| +..|+||..+++-.. +. ..|... ......-+|+.- .++++|+|-|. ..+.||.
T Consensus 127 ~gk~yfFkG--~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~--------~ywr~d~ 196 (225)
T 3oyo_A 127 GKEVYLFKG--NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQ--------NYVRIDF 196 (225)
T ss_dssp TTEEEEEET--TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETT--------EEEEEEC
T ss_pred CCcEEEEeC--CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECC--------EEEEEeC
Confidence 689999976 689999987765443 11 222210 000011133322 47899999875 3788888
Q ss_pred C
Q 012755 427 T 427 (457)
Q Consensus 427 ~ 427 (457)
.
T Consensus 197 ~ 197 (225)
T 3oyo_A 197 T 197 (225)
T ss_dssp C
T ss_pred C
Confidence 7
No 280
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=76.32 E-value=59 Score=31.60 Aligned_cols=200 Identities=11% Similarity=0.042 Sum_probs=98.2
Q ss_pred cEEEEEecCccEEEEeCCCCcEEeCCC-CCCCccccCCCeeeEEeCCEEEEEceec--CCcEEEEEECCCCcEE---eCC
Q 012755 161 HWVYLACILMPWEAFDPLRQRWMRLPR-MQCDECFTSADKESLAVGTQLLVFGREL--SGFAIWMYSLIANCWS---KCP 234 (457)
Q Consensus 161 ~~l~~~~~~~~~~~ydp~~~~W~~l~~-~p~~~~~~~~~~~~~~~~~~lyv~GG~~--~~~~v~~yd~~t~~W~---~l~ 234 (457)
+.||+.-....+..+|+.++....+.. ...|. ...+..++.||+..... ....+..+++... +. .++
T Consensus 153 g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~------giavd~dG~lyVad~~~~~~~~gv~~~~~~~~-~~~~~~~~ 225 (433)
T 4hw6_A 153 DDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCA------DVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG-FTERLSLC 225 (433)
T ss_dssp CEEEEECBTSCEEEEETTTTEEEEECCCCSCEE------EEEECTTCCEEEEECCSCTTSEEEEEECGGGT-TCCEEEEE
T ss_pred CEEEEEeCCCCEEEEECCCCEEEEeecCCCCcc------EEEECCCCCEEEEcCCCCcccceEEEEECCCC-eecccccc
Confidence 678877434788999998887766543 11111 01122345588875321 1223555655322 21 222
Q ss_pred CCCCCccceeEEee--CCEEEEEeeecCCCCccceEEEEeCCCCcE-EECCCCCCCCcceeEEEE-CC-EEEEEeccCCC
Q 012755 235 QMNLPRCLFGSSSL--GEVAIVAGGTDKNGCILKSAELYNSELGTW-ETLPDMNLPRKLCSGFFM-DG-KFYIIGGMSSP 309 (457)
Q Consensus 235 ~lp~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W-~~~~~~p~~r~~~~~~~~-~g-~iyv~GG~~~~ 309 (457)
.+..| ..+++- ++.||+.-. ....+++||+.+++- +.+...........+++- +| .||+.--
T Consensus 226 ~~~~P---~giavd~~~G~lyv~d~------~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~---- 292 (433)
T 4hw6_A 226 NARGA---KTCAVHPQNGKIYYTRY------HHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN---- 292 (433)
T ss_dssp ECSSB---CCCEECTTTCCEEECBT------TCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET----
T ss_pred ccCCC---CEEEEeCCCCeEEEEEC------CCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC----
Confidence 22222 223332 678988632 235799999987765 222111111111123332 34 5999742
Q ss_pred CCCCceEEEEECC--CCceE---EcCCC-CCCCCCCC--CCCCCCCCCEEEE----------ECCEEEEEecCCCeEEEE
Q 012755 310 TDPLTCGEEYNLE--TRTWK---RIENM-YPSNVGTQ--SNPAMSSPPLVAV----------VNNQLYSADQATNVVKKY 371 (457)
Q Consensus 310 ~~~~~~~~~yd~~--t~~W~---~~~~~-~~~~~~~~--~~~~~r~~~~~~~----------~~g~ly~~gg~~~~v~~Y 371 (457)
..+.+.++|.. +.... .+... .......+ .........++++ -+|.||+.....+.|.++
T Consensus 293 --~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~ 370 (433)
T 4hw6_A 293 --GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVL 370 (433)
T ss_dssp --TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEE
T ss_pred --CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEE
Confidence 24577886654 33321 11110 00000000 0000112223444 357899998778899999
Q ss_pred ECCCCcEEEecc
Q 012755 372 NKTNNSWTVVKR 383 (457)
Q Consensus 372 d~~~~~W~~v~~ 383 (457)
|+. +....+..
T Consensus 371 ~~~-G~v~t~~G 381 (433)
T 4hw6_A 371 TPE-GRVTTYAG 381 (433)
T ss_dssp CTT-SEEEEEEC
T ss_pred CCC-CCEEEEEe
Confidence 984 45555543
No 281
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=76.22 E-value=20 Score=35.01 Aligned_cols=131 Identities=12% Similarity=0.166 Sum_probs=70.2
Q ss_pred CEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEE--ECCEEEEEeccCCCCCCCceEEEEECCCCceE
Q 012755 250 EVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFF--MDGKFYIIGGMSSPTDPLTCGEEYNLETRTWK 327 (457)
Q Consensus 250 ~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~--~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 327 (457)
+.||+.-. . ..+.++|+.+++.+.+.. . ......+. -+|.||+...... .....+..++... .|.
T Consensus 153 g~Lyv~D~-----~--~~I~~id~~~g~v~~~~~-~--~~~P~giavd~dG~lyVad~~~~--~~~~gv~~~~~~~-~~~ 219 (433)
T 4hw6_A 153 DDLYWVGQ-----R--DAFRHVDFVNQYVDIKTT-N--IGQCADVNFTLNGDMVVVDDQSS--DTNTGIYLFTRAS-GFT 219 (433)
T ss_dssp CEEEEECB-----T--SCEEEEETTTTEEEEECC-C--CSCEEEEEECTTCCEEEEECCSC--TTSEEEEEECGGG-TTC
T ss_pred CEEEEEeC-----C--CCEEEEECCCCEEEEeec-C--CCCccEEEECCCCCEEEEcCCCC--cccceEEEEECCC-Cee
Confidence 78999732 1 689999999998877643 1 11122222 2567999753221 1123455565532 222
Q ss_pred ---EcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcE-EEeccCCCccCCCCcceEEEEEe
Q 012755 328 ---RIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSW-TVVKRLPVRANSFNGWGLAFKAC 401 (457)
Q Consensus 328 ---~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W-~~v~~~p~~~~~~~~~~~~~~~~ 401 (457)
.++.. .....+++. +|.||+.....+.|++||+++.+- +.+........ ..++++...
T Consensus 220 ~~~~~~~~-------------~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~---~~~ia~dpd 283 (433)
T 4hw6_A 220 ERLSLCNA-------------RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGS---NFHIVWHPT 283 (433)
T ss_dssp CEEEEEEC-------------SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSS---CEEEEECTT
T ss_pred cccccccc-------------CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCC---cccEEEeCC
Confidence 22211 112223333 688999876677899999987655 33322211110 122333223
Q ss_pred CCEEEEEc
Q 012755 402 GNSLLVIG 409 (457)
Q Consensus 402 ~g~lyv~G 409 (457)
++.||+.-
T Consensus 284 G~~LYvad 291 (433)
T 4hw6_A 284 GDWAYIIY 291 (433)
T ss_dssp SSEEEEEE
T ss_pred CCEEEEEe
Confidence 45699875
No 282
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=74.79 E-value=40 Score=28.93 Aligned_cols=143 Identities=13% Similarity=0.074 Sum_probs=72.3
Q ss_pred EEeeCCEEEEEeeecCCCCccceEEEEeCCC---CcEEEC----CCCCCCCcceeEEE--ECCEEEEEeccCCCCCCCce
Q 012755 245 SSSLGEVAIVAGGTDKNGCILKSAELYNSEL---GTWETL----PDMNLPRKLCSGFF--MDGKFYIIGGMSSPTDPLTC 315 (457)
Q Consensus 245 ~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t---~~W~~~----~~~p~~r~~~~~~~--~~g~iyv~GG~~~~~~~~~~ 315 (457)
++.+.+++|+|-| ..+|+++..+ +.=..+ +.+|. ...+|. .+|++|.+-| +.
T Consensus 11 ~~~~~g~~~fFkg--------~~~w~~~~~~~~~gyP~~I~~~w~glP~---~iDAa~~~~~g~~yfFkg--------~~ 71 (196)
T 3c7x_A 11 VAMLRGEMFVFKE--------RWFWRVRNNQVMDGYPMPIGQFWRGLPA---SINTAYERKDGKFVFFKG--------DK 71 (196)
T ss_dssp EEEETTEEEEEET--------TEEEEEETTEECTTCSEEHHHHSTTCCS---SCCEEEECTTSCEEEEET--------TE
T ss_pred EEEcCCEEEEEEC--------CEEEEEECCccCCCCceEhhHhccCCCC---CccEEEEeCCCcEEEecC--------CE
Confidence 4466889999965 3455654321 100111 23343 122332 3788999855 34
Q ss_pred EEEEECCCCce---EEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEE-----Eec---
Q 012755 316 GEEYNLETRTW---KRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSWT-----VVK--- 382 (457)
Q Consensus 316 ~~~yd~~t~~W---~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~-----~v~--- 382 (457)
.++|+..+... ..+....+ + .|. ...-++... ++++|++-| +..|+||..+++=. .+.
T Consensus 72 yw~~~~~~~~~gyPk~I~~~~~-----g-lP~-~~IDAA~~~~~~g~~yfFkG--~~yw~yd~~~~~v~~gyPk~i~~~~ 142 (196)
T 3c7x_A 72 HWVFDEASLEPGYPKHIKELGR-----G-LPT-DKIDAALFWMPNGKTYFFRG--NKYYRFNEELRAVDSEYPKNIKVWE 142 (196)
T ss_dssp EEEEETTEECTTCSEEGGGTCB-----S-CCS-SCCSEEEEETTTTEEEEEET--TEEEEEETTTTEECTTCSEEGGGSB
T ss_pred EEEEeCCcccCCCCeEhhhcCC-----C-CCC-CcccEEEEEccCCEEEEEEC--CEEEEEeCCcccccCCCCccHHHCC
Confidence 67787542110 11221111 0 111 122233333 689999965 67899998775311 111
Q ss_pred cCCCccCCCCcceEEEEEeCC-EEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 383 RLPVRANSFNGWGLAFKACGN-SLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 383 ~~p~~~~~~~~~~~~~~~~~g-~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
.+|.. .-+|+...++ ++|.|-|. ..+.||..+.
T Consensus 143 gip~~------idaAf~~~~~~~~YfFkg~--------~y~r~d~~~~ 176 (196)
T 3c7x_A 143 GIPES------PRGSFMGSDEVFTYFYKGN--------KYWKFNNQKL 176 (196)
T ss_dssp TCCSS------CSEEEECTTSSEEEEEETT--------EEEEEETTTT
T ss_pred CcCCC------cceeEEecCCCEEEEEECC--------EEEEEECCcc
Confidence 22211 1133333244 99999775 3788888763
No 283
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=74.43 E-value=62 Score=30.97 Aligned_cols=171 Identities=10% Similarity=0.023 Sum_probs=91.3
Q ss_pred cEEEEEECCCCcEEeCCCCCCCccceeEEe--eCCEEEEEeeecCCCCccceEEEEeCCCC----cE-EECC-CCCCCCc
Q 012755 218 FAIWMYSLIANCWSKCPQMNLPRCLFGSSS--LGEVAIVAGGTDKNGCILKSAELYNSELG----TW-ETLP-DMNLPRK 289 (457)
Q Consensus 218 ~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~yd~~t~----~W-~~~~-~~p~~r~ 289 (457)
..+...++....+..+.+ ......+++. .++.||+.-- ....+.++++... .. ..+. .+. .
T Consensus 92 ~~I~~i~l~~~~~~~~~~--~~~~~~~l~~d~~~~~lywsD~------~~~~I~~~~~~g~~~~~~~~~~~~~~~~---~ 160 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISRDIQ---A 160 (400)
T ss_dssp TEEEEECTTSCSCEEEEC--SCSCEEEEEEETTTTEEEEEET------TTTEEEEEEC------CCCEEEECSSCS---C
T ss_pred ceeEEEccCCcceeEecc--ccCcceEEeeeeccCceEEEec------CCCeEEEEEcccCCCCCcceEEEeCCCC---C
Confidence 356777777666655422 1112233333 3689999732 2356888888652 12 2222 111 1
Q ss_pred ceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEe-cC
Q 012755 290 LCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSAD-QA 364 (457)
Q Consensus 290 ~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~g-g~ 364 (457)
-.++++- ++.||+... ....+.++|+....-..+.... .....++++- +|.||... +.
T Consensus 161 p~glavD~~~~~lY~~d~------~~~~I~~~~~~g~~~~~l~~~~-----------~~~P~~iavdp~~g~ly~td~~~ 223 (400)
T 3p5b_L 161 PDGLAVDWIHSNIYWTDS------VLGTVSVADTKGVKRKTLFREN-----------GSKPRAIVVDPVHGFMYWTDWGT 223 (400)
T ss_dssp EEEEEEETTTTEEEEEET------TTTEEEEECTTTCSEEEEEECS-----------SCCEEEEEEETTTTEEEEEECSS
T ss_pred cccEEEEecCCceEEEEC------CCCeEEEEeCCCCceEEEEeCC-----------CCCcceEEEecccCeEEEEeCCC
Confidence 2233443 789999843 2357889998876655443211 1112234443 68999987 33
Q ss_pred CCeEEEEECCCCcEEEe-c-cCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 365 TNVVKKYNKTNNSWTVV-K-RLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 365 ~~~v~~Yd~~~~~W~~v-~-~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
...|++++++...=+.+ . .+..+ .|+++...+++||+.-... ..|+.+|.+.
T Consensus 224 ~~~I~~~~~dG~~~~~~~~~~l~~P------~glavd~~~~~lY~aD~~~------~~I~~~d~dG 277 (400)
T 3p5b_L 224 PAKIKKGGLNGVDIYSLVTENIQWP------NGITLDLLSGRLYWVDSKL------HSISSIDVNG 277 (400)
T ss_dssp SCCEEEEETTSCSCEEEECSSCSCE------EEEEEETTTTEEEEEETTT------TEEEEEETTS
T ss_pred CCEEEEEeCCCCccEEEEECCCCce------EEEEEEeCCCEEEEEECCC------CEEEEEeCCC
Confidence 47899999876533332 1 11111 1344333478999985332 2577777754
No 284
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=74.37 E-value=48 Score=34.16 Aligned_cols=57 Identities=0% Similarity=-0.267 Sum_probs=31.9
Q ss_pred cEEEEEECCCCcEEeCCCCCCCc--cceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEEC
Q 012755 218 FAIWMYSLIANCWSKCPQMNLPR--CLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETL 281 (457)
Q Consensus 218 ~~v~~yd~~t~~W~~l~~lp~~r--~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~ 281 (457)
..++++|..+++-+.+....... .....-.-+++.++++.. ..++++|..++.-..+
T Consensus 91 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-------~~i~~~~~~~g~~~~~ 149 (723)
T 1xfd_A 91 GYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-------NNIYYCAHVGKQAIRV 149 (723)
T ss_dssp SEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-------TEEEEESSSSSCCEEE
T ss_pred eeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-------CeEEEEECCCCceEEE
Confidence 57999999988766665432211 111111224544444331 3688888887765554
No 285
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=74.28 E-value=73 Score=31.73 Aligned_cols=204 Identities=11% Similarity=0.026 Sum_probs=101.0
Q ss_pred ccEEEEEec-CccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEE--------e-CCEEEEEceec----CCcEEEEEEC
Q 012755 160 EHWVYLACI-LMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLA--------V-GTQLLVFGREL----SGFAIWMYSL 225 (457)
Q Consensus 160 ~~~l~~~~~-~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~--------~-~~~lyv~GG~~----~~~~v~~yd~ 225 (457)
+..||++.. ...+.+.|+..+....+....... ......++. . ++.||+..-.. ....+++++.
T Consensus 151 ~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~--~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r 228 (496)
T 3kya_A 151 KDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIP--TNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKR 228 (496)
T ss_dssp EEEEEEEEETEEEEEEEETTTTEEEEEECCTTSS--CSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEEC
T ss_pred CCEEEEEECCCCeEEEEECCCCEEEEEEccCccc--cCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEec
Confidence 467888754 356888999998887765433211 001111222 2 44588874332 1235788876
Q ss_pred CC-CcEE------eCCCCCCCccceeEEee--CCEEEEEeeecCCCCccceEEEEeCC-------CCc-EEEC-------
Q 012755 226 IA-NCWS------KCPQMNLPRCLFGSSSL--GEVAIVAGGTDKNGCILKSAELYNSE-------LGT-WETL------- 281 (457)
Q Consensus 226 ~t-~~W~------~l~~lp~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~yd~~-------t~~-W~~~------- 281 (457)
.. +.|. .++.+.. .++++.. ++.||+.-- ....+.+||+. +++ |+..
T Consensus 229 ~~~G~~~~~~~~~~v~~~~~---p~giavdp~~g~LYvtd~------~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 229 NADGTFDDRSDIQLIAAYKQ---CNGATIHPINGELYFNSY------EKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp CTTSCCSTTSCEEEEEEESC---CCCEEECTTTCCEEEEET------TTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred CCCCceeecccceeeccCCC---ceEEEEcCCCCeEEEEEC------CCCEEEEEecccccccccCceeecccccccccc
Confidence 54 3553 2332222 2344333 578888742 13469999987 554 4321
Q ss_pred ----CCCCCCCcceeEEEE-CCE-EEEEeccCCCCCCCceEEEE--ECCCCce---EEcCCCCCCCCCCCCC---CCCCC
Q 012755 282 ----PDMNLPRKLCSGFFM-DGK-FYIIGGMSSPTDPLTCGEEY--NLETRTW---KRIENMYPSNVGTQSN---PAMSS 347 (457)
Q Consensus 282 ----~~~p~~r~~~~~~~~-~g~-iyv~GG~~~~~~~~~~~~~y--d~~t~~W---~~~~~~~~~~~~~~~~---~~~r~ 347 (457)
...+..-....+++. +|. ||+.-- ..+.+.++ |..+... +.+..... ..|.... .+.-.
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~------~~h~I~kid~dg~~~~~~~~~~~aG~~g-~~G~~DG~~~~a~f~ 372 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVI------NNHYFMRSDYDEIKKEFITPYNFVGGYK-QSGYRDDVGTEARMN 372 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEET------TTTEEEEEEEETTTTEECCCEEEEEBTT-BCCCBCCBGGGCBCS
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeC------CCCEEEEEecCCCcceecccEEecCCCC-CCcccCCcccccccC
Confidence 111211111223332 454 898731 24567774 4454433 22221100 0000000 01111
Q ss_pred CCE--EEEE--------CCEEEEEecCCCeEEEEECCCCcEEEec
Q 012755 348 PPL--VAVV--------NNQLYSADQATNVVKKYNKTNNSWTVVK 382 (457)
Q Consensus 348 ~~~--~~~~--------~g~ly~~gg~~~~v~~Yd~~~~~W~~v~ 382 (457)
.+. +++. ++.||+.....+.|.++++.. .-+.+.
T Consensus 373 ~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G-~v~Tia 416 (496)
T 3kya_A 373 NPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEG-IVSTYA 416 (496)
T ss_dssp SEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTC-BEEEEE
T ss_pred CCeEEEEEccccccccCCCeEEEEECCCCEEEEEeCCC-CEEEEe
Confidence 223 3442 478999987778999999754 555553
No 286
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=73.84 E-value=56 Score=30.19 Aligned_cols=182 Identities=15% Similarity=0.052 Sum_probs=100.1
Q ss_pred CCEEEEEceecCCcEEEEEECCCCc---EEeCCCCCCCccceeEEe--eCCEEEEEeeecCCCCccceEEEEeCCCCcEE
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANC---WSKCPQMNLPRCLFGSSS--LGEVAIVAGGTDKNGCILKSAELYNSELGTWE 279 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~---W~~l~~lp~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~ 279 (457)
++.||+.. .....++++++.... +.....+..| .++++ .++.||+.-. ....++++|+....-+
T Consensus 46 ~~~lyw~D--~~~~~I~r~~~~g~~~~~~~~~~~l~~p---~glavd~~~g~ly~~d~------~~~~I~~~~~dG~~~~ 114 (318)
T 3sov_A 46 HGLIYWSD--VSEEAIKRTEFNKTESVQNVVVSGLLSP---DGLACDWLGEKLYWTDS------ETNRIEVSNLDGSLRK 114 (318)
T ss_dssp GTEEEEEE--TTTTEEEEEETTSSSCCCEEEEECCSCC---CEEEEETTTTEEEEEET------TTTEEEEEETTSCSCE
T ss_pred CCEEEEEE--CCCCcEEEEEccCCCceEEEEcCCCCCc---cEEEEEcCCCeEEEEEC------CCCEEEEEECCCCcEE
Confidence 57888864 234578888887652 2211222222 23333 4789999732 1357889998765433
Q ss_pred EC--CCCCCCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-
Q 012755 280 TL--PDMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV- 354 (457)
Q Consensus 280 ~~--~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~- 354 (457)
.+ ..+..| .+.++- +|.||+..-. ....++++++....=+.+... . .....++++-
T Consensus 115 ~l~~~~~~~P---~giavdp~~g~ly~td~~-----~~~~I~r~~~dG~~~~~~~~~-~----------l~~Pnglavd~ 175 (318)
T 3sov_A 115 VLFWQELDQP---RAIALDPSSGFMYWTDWG-----EVPKIERAGMDGSSRFIIINS-E----------IYWPNGLTLDY 175 (318)
T ss_dssp EEECSSCSSE---EEEEEEGGGTEEEEEECS-----SSCEEEEEETTSCSCEEEECS-S----------CSCEEEEEEET
T ss_pred EEEeCCCCCc---cEEEEeCCCCEEEEEecC-----CCCEEEEEEcCCCCeEEEEEC-C----------CCCccEEEEec
Confidence 33 222222 233333 5899997411 135788998875432222110 0 1112244543
Q ss_pred -CCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 355 -NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 355 -~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
+++||+.....+.|+++|++...=+.+..-. . ..-.+++..++.||+.--.. ..|..+++.+
T Consensus 176 ~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~--~----~~P~glav~~~~lywtd~~~------~~V~~~~~~~ 238 (318)
T 3sov_A 176 EEQKLYWADAKLNFIHKSNLDGTNRQAVVKGS--L----PHPFALTLFEDILYWTDWST------HSILACNKYT 238 (318)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECSC--C----SCEEEEEEETTEEEEEETTT------TEEEEEETTT
T ss_pred cCCEEEEEECCCCEEEEEcCCCCceEEEecCC--C----CCceEEEEeCCEEEEEecCC------CeEEEEECCC
Confidence 6899999988899999999864434333211 1 11123445688999873211 2577777755
No 287
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=73.36 E-value=87 Score=32.17 Aligned_cols=208 Identities=11% Similarity=0.021 Sum_probs=113.6
Q ss_pred ccEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEE--eCCEEEEEceecCCcEEEEEECCCCcEEeCCCCC
Q 012755 160 EHWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLA--VGTQLLVFGRELSGFAIWMYSLIANCWSKCPQMN 237 (457)
Q Consensus 160 ~~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~--~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp 237 (457)
+++|++. ....+...|.....-..+-+++.-... ..+.. .++.||+..- ....++++++.....+.+....
T Consensus 6 ~~~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~----~~l~~d~~~~~lywtD~--~~~~I~r~~~~g~~~~~v~~~g 78 (628)
T 4a0p_A 6 EAFLLFS-RRADIRRISLETNNNNVAIPLTGVKEA----SALDFDVTDNRIYWTDI--SLKTISRAFMNGSALEHVVEFG 78 (628)
T ss_dssp CCEEEEE-ETTEEEEEESSCTTCEEECCCCSCSCE----EEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSS
T ss_pred CcEEEEE-eCCcEEEEECCCCCcceEEEcCCCCce----EEEEEECCCCEEEEEEC--CCCeEEEEECCCCCcEEEEeCC
Confidence 4444443 456777788766543222222211110 01122 2678888643 3457888988765554432211
Q ss_pred CCccceeEEe--eCCEEEEEeeecCCCCccceEEEEeCCCCcEEEC--CCCCCCCcceeEEEE--CCEEEEEeccCCCCC
Q 012755 238 LPRCLFGSSS--LGEVAIVAGGTDKNGCILKSAELYNSELGTWETL--PDMNLPRKLCSGFFM--DGKFYIIGGMSSPTD 311 (457)
Q Consensus 238 ~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~--~~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~ 311 (457)
.. .-.++++ .+++||+.-. ....++++|+....=+.+ ..+..| .+.++- +|.||+.-- +
T Consensus 79 ~~-~P~GlAvD~~~~~LY~tD~------~~~~I~v~~~dG~~~~~l~~~~l~~P---~~iavdp~~G~lY~tD~----g- 143 (628)
T 4a0p_A 79 LD-YPEGMAVDWLGKNLYWADT------GTNRIEVSKLDGQHRQVLVWKDLDSP---RALALDPAEGFMYWTEW----G- 143 (628)
T ss_dssp CS-CCCEEEEETTTTEEEEEET------TTTEEEEEETTSTTCEEEECSSCCCE---EEEEEETTTTEEEEEEC----S-
T ss_pred CC-CcceEEEEeCCCEEEEEEC------CCCEEEEEecCCCcEEEEEeCCCCCc---ccEEEccCCCeEEEeCC----C-
Confidence 11 1123444 5789999732 236889999865543322 223222 234443 689999741 0
Q ss_pred CCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEEEecc-CCCcc
Q 012755 312 PLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSWTVVKR-LPVRA 388 (457)
Q Consensus 312 ~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~-~p~~~ 388 (457)
....+++.++....-+.+..- .....+++.- +++||+.....+.|+.+|++...=+.+.. ++.
T Consensus 144 ~~~~I~r~~~dG~~~~~l~~~------------~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~-- 209 (628)
T 4a0p_A 144 GKPKIDRAAMDGSERTTLVPN------------VGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPH-- 209 (628)
T ss_dssp SSCEEEEEETTSCSCEEEECS------------CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSC--
T ss_pred CCCEEEEEeCCCCceEEEECC------------CCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCC--
Confidence 135788888876655444321 1112234433 58999999888999999997642233322 211
Q ss_pred CCCCcceEEEEEeCCEEEEEc
Q 012755 389 NSFNGWGLAFKACGNSLLVIG 409 (457)
Q Consensus 389 ~~~~~~~~~~~~~~g~lyv~G 409 (457)
-.+++..++.||+.-
T Consensus 210 ------P~glav~~~~ly~tD 224 (628)
T 4a0p_A 210 ------PFGLTQYQDYIYWTD 224 (628)
T ss_dssp ------EEEEEEETTEEEEEE
T ss_pred ------ceEEEEECCEEEEec
Confidence 134556788999875
No 288
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=73.03 E-value=60 Score=30.13 Aligned_cols=65 Identities=6% Similarity=0.074 Sum_probs=38.4
Q ss_pred CCEEEEEecCCCe-EEEEECCCCcEEEeccCCCccCCCCcceEEE-EEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 355 NNQLYSADQATNV-VKKYNKTNNSWTVVKRLPVRANSFNGWGLAF-KACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 355 ~g~ly~~gg~~~~-v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~-~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
+|++++.|+..+. +..||..+.+-.. .+.... +...-..+ ..-++++++.|+.++ .+.+||....
T Consensus 206 ~g~~l~s~s~d~~~v~iwd~~~~~~~~--~~~~g~--h~~~v~~~~~s~~~~~l~s~s~d~------~v~iw~~~~~ 272 (355)
T 3vu4_A 206 KSDMVATCSQDGTIIRVFKTEDGVLVR--EFRRGL--DRADVVDMKWSTDGSKLAVVSDKW------TLHVFEIFND 272 (355)
T ss_dssp TSSEEEEEETTCSEEEEEETTTCCEEE--EEECTT--CCSCEEEEEECTTSCEEEEEETTC------EEEEEESSCC
T ss_pred CCCEEEEEeCCCCEEEEEECCCCcEEE--EEEcCC--CCCcEEEEEECCCCCEEEEEECCC------EEEEEEccCC
Confidence 6777888878887 9999998764322 221000 00111112 123677777777663 6888988764
No 289
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=72.03 E-value=78 Score=31.06 Aligned_cols=61 Identities=13% Similarity=0.141 Sum_probs=37.3
Q ss_pred CCEEEEEecCCCeEEEEECCCCcEE-----Eec-cCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 355 NNQLYSADQATNVVKKYNKTNNSWT-----VVK-RLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 355 ~g~ly~~gg~~~~v~~Yd~~~~~W~-----~v~-~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
++++|++-| +..|+||..+++-. .+. ..|.... ..-+ +...+|++|.|-|. ..|.||..+
T Consensus 367 ~~k~yfFkG--~~yw~yd~~~~~~~~gYPk~I~~~fpgip~---~iDA-A~~~~g~~YFFkg~--------~ywr~d~~~ 432 (450)
T 1su3_A 367 TGKTYFFVA--NKYWRYDEYKRSMDPGYPKMIAHDFPGIGH---KVDA-VFMKDGFFYFFHGT--------RQYKFDPKT 432 (450)
T ss_dssp TTEEEEEET--TEEEEEETTTTEECSSCSEEHHHHSTTSCS---CCSE-EEEETTEEEEEETT--------EEEEEETTT
T ss_pred CCeEEEEeC--CEEEEEeCCCccccCCCCcchhhcCCCCCC---CccE-EEEcCCeEEEEeCC--------EEEEEECCc
Confidence 589999976 68999998754321 111 1111111 1113 33568999999875 378888876
Q ss_pred C
Q 012755 429 G 429 (457)
Q Consensus 429 ~ 429 (457)
.
T Consensus 433 ~ 433 (450)
T 1su3_A 433 K 433 (450)
T ss_dssp T
T ss_pred c
Confidence 3
No 290
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=70.23 E-value=5.3 Score=37.92 Aligned_cols=26 Identities=4% Similarity=0.015 Sum_probs=19.0
Q ss_pred CCEEEEEe-cCCCeEEEEECCCCcEEE
Q 012755 355 NNQLYSAD-QATNVVKKYNKTNNSWTV 380 (457)
Q Consensus 355 ~g~ly~~g-g~~~~v~~Yd~~~~~W~~ 380 (457)
++.+|++. ...+.++.+|.+++.|+.
T Consensus 55 ~~~~~vv~p~~dG~l~a~~~~~G~~~~ 81 (339)
T 2be1_A 55 TYETLIIEPFGDGNIYYFNAHQGLQKL 81 (339)
T ss_dssp SSEEEEECCSTTTEEEEEETTTEEEEE
T ss_pred CCcEEEEEECCCCEEEEEECCCCcEEe
Confidence 56777775 356788999988877654
No 291
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=69.59 E-value=53 Score=28.11 Aligned_cols=142 Identities=9% Similarity=0.087 Sum_probs=76.1
Q ss_pred eEEeeCCEEEEEeeecCCCCccceEEEEeCCCC--cEE--EC----CCCCCCCcceeEEE-E--CCEEEEEeccCCCCCC
Q 012755 244 GSSSLGEVAIVAGGTDKNGCILKSAELYNSELG--TWE--TL----PDMNLPRKLCSGFF-M--DGKFYIIGGMSSPTDP 312 (457)
Q Consensus 244 ~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~--~W~--~~----~~~p~~r~~~~~~~-~--~g~iyv~GG~~~~~~~ 312 (457)
+++.+++++|+|=| ...|+++.... ... .+ +.+|.. ..+|. . ++++|++-|
T Consensus 11 Ai~~~~g~~yfFkg--------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~---IDAa~~~~~~~~~yfFkG------- 72 (195)
T 1itv_A 11 AIAEIGNQLYLFKD--------GKYWRFSEGRGSRPQGPFLIADKWPALPRK---LDSVFEEPLSKKLFFFSG------- 72 (195)
T ss_dssp EEEEETTEEEEEET--------TEEEEECCSSSCCCEEEEEHHHHCTTSCSS---CSEEEECTTTCCEEEEET-------
T ss_pred EEEEeCCEEEEEEC--------CEEEEEECCccccCCCcEEhhhccCCCCCC---ccEEEEECCCCeEEEEeC-------
Confidence 34567999999965 45677766542 221 11 334432 22333 2 688999965
Q ss_pred CceEEEEECCCCce-EEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcEE-----Ee---
Q 012755 313 LTCGEEYNLETRTW-KRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSWT-----VV--- 381 (457)
Q Consensus 313 ~~~~~~yd~~t~~W-~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~-----~v--- 381 (457)
+..++|+..+..- ..+..+ |. |.......++.. +|++|++-| +..|.||..+++=. .+
T Consensus 73 -~~yw~~~~~~~~~Pk~i~~~-----G~---p~~~~~iDAA~~~~~g~~yfFkg--~~ywr~d~~~~~~~~gyPr~i~~~ 141 (195)
T 1itv_A 73 -RQVWVYTGASVLGPRRLDKL-----GL---GADVAQVTGALRSGRGKMLLFSG--RRLWRFDVKAQMVDPRSASEVDRM 141 (195)
T ss_dssp -TEEEEEETTEEEEEEEGGGG-----TC---CTTCCCCCEEEECSTTEEEEEET--TEEEEEETTTTEECGGGCEEHHHH
T ss_pred -CEEEEEcCCccCCCEEeeec-----cc---CCCccceeEEEEcCCCeEEEEeC--CEEEEEeCCcccccCCCccChhhc
Confidence 3457777542110 011111 11 111112223333 689999965 68999998775310 11
Q ss_pred -ccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 382 -KRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 382 -~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
..+|... - ++...+|.+|.+-|. ..+.|+..+.
T Consensus 142 w~Gvp~~i------d-aa~~~~g~~Yffkg~--------~y~~~~~~~~ 175 (195)
T 1itv_A 142 FPGVPLDT------H-DVFQFREKAYFCQDR--------FYWRVSSRSE 175 (195)
T ss_dssp STTSCSSC------S-EEEEETTEEEEEETT--------EEEEEECCTT
T ss_pred CCCCCCCC------C-EEEEeCCeEEEEeCC--------EEEEEECCcc
Confidence 1222221 1 334557999999875 3777888764
No 292
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=69.27 E-value=78 Score=29.92 Aligned_cols=68 Identities=12% Similarity=0.108 Sum_probs=38.8
Q ss_pred CCEEEEEeccCCC---CCCCceEEEEECCCCce-EEcCCCCCCCCCCCCCCCCCCCCEEE-EECCE--EEEEecCCCeEE
Q 012755 297 DGKFYIIGGMSSP---TDPLTCGEEYNLETRTW-KRIENMYPSNVGTQSNPAMSSPPLVA-VVNNQ--LYSADQATNVVK 369 (457)
Q Consensus 297 ~g~iyv~GG~~~~---~~~~~~~~~yd~~t~~W-~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~g~--ly~~gg~~~~v~ 369 (457)
++++|+....... ....+.+.++|+++.+= ..+ +. .....+++ .-+|+ +|+.....+.|.
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i---~~----------g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ 344 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQI---SL----------GHDVDAISVAQDGGPDLYALSAGTEVLH 344 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEE---EC----------CCCcCeEEECCCCCeEEEEEcCCCCeEE
Confidence 4679997542111 11246899999987654 333 22 11122333 33565 555444578999
Q ss_pred EEECCCCc
Q 012755 370 KYNKTNNS 377 (457)
Q Consensus 370 ~Yd~~~~~ 377 (457)
+||.++.+
T Consensus 345 ViD~~t~~ 352 (373)
T 2mad_H 345 IYDAGAGD 352 (373)
T ss_pred EEECCCCC
Confidence 99988754
No 293
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=67.86 E-value=76 Score=29.26 Aligned_cols=183 Identities=11% Similarity=0.045 Sum_probs=100.6
Q ss_pred ccEEEEEec-CccEEEEeCCCCc---EEeCCCCCCCccccCCCeeeEE--eCCEEEEEceecCCcEEEEEECCCCcEEeC
Q 012755 160 EHWVYLACI-LMPWEAFDPLRQR---WMRLPRMQCDECFTSADKESLA--VGTQLLVFGRELSGFAIWMYSLIANCWSKC 233 (457)
Q Consensus 160 ~~~l~~~~~-~~~~~~ydp~~~~---W~~l~~~p~~~~~~~~~~~~~~--~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l 233 (457)
++.||..-. ...++.+++.... +.....+..| ..+++ .++.||+.-. ....+.++++....-+.+
T Consensus 46 ~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p-------~glavd~~~g~ly~~d~--~~~~I~~~~~dG~~~~~l 116 (318)
T 3sov_A 46 HGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSP-------DGLACDWLGEKLYWTDS--ETNRIEVSNLDGSLRKVL 116 (318)
T ss_dssp GTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCC-------CEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEE
T ss_pred CCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCc-------cEEEEEcCCCeEEEEEC--CCCEEEEEECCCCcEEEE
Confidence 456676532 4567777776542 2111111111 11233 3788988642 235788998875433332
Q ss_pred --CCCCCCccceeEEe--eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEE--CCEEEEEeccC
Q 012755 234 --PQMNLPRCLFGSSS--LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFM--DGKFYIIGGMS 307 (457)
Q Consensus 234 --~~lp~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~g~iyv~GG~~ 307 (457)
..+..|+ ++++ .++.||+.--. ....++++++....=+.+..-. -..-.+.++- +++||+.-.
T Consensus 117 ~~~~~~~P~---giavdp~~g~ly~td~~-----~~~~I~r~~~dG~~~~~~~~~~-l~~Pnglavd~~~~~lY~aD~-- 185 (318)
T 3sov_A 117 FWQELDQPR---AIALDPSSGFMYWTDWG-----EVPKIERAGMDGSSRFIIINSE-IYWPNGLTLDYEEQKLYWADA-- 185 (318)
T ss_dssp ECSSCSSEE---EEEEEGGGTEEEEEECS-----SSCEEEEEETTSCSCEEEECSS-CSCEEEEEEETTTTEEEEEET--
T ss_pred EeCCCCCcc---EEEEeCCCCEEEEEecC-----CCCEEEEEEcCCCCeEEEEECC-CCCccEEEEeccCCEEEEEEC--
Confidence 2333332 2333 36889987411 1357888988643322221101 1111233443 689999842
Q ss_pred CCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEecCCCeEEEEECCCCc
Q 012755 308 SPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQATNVVKKYNKTNNS 377 (457)
Q Consensus 308 ~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg~~~~v~~Yd~~~~~ 377 (457)
....++++|+....-+.+... . .....++++.++.+|......+.|.++|+.+++
T Consensus 186 ----~~~~I~~~d~dG~~~~~~~~~-~----------~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 186 ----KLNFIHKSNLDGTNRQAVVKG-S----------LPHPFALTLFEDILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp ----TTTEEEEEETTSCSCEEEECS-C----------CSCEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred ----CCCEEEEEcCCCCceEEEecC-C----------CCCceEEEEeCCEEEEEecCCCeEEEEECCCCC
Confidence 246789999875443333221 1 122346777899999998778899999996554
No 294
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=67.65 E-value=1.2e+02 Score=31.36 Aligned_cols=188 Identities=9% Similarity=0.030 Sum_probs=95.9
Q ss_pred ccEEEEeCCCCcEEeCCCCCCCcc-ccCCCeeeEEeCC-EEEEEcee----------cCCcEEEEEECCCCcE--EeCCC
Q 012755 170 MPWEAFDPLRQRWMRLPRMQCDEC-FTSADKESLAVGT-QLLVFGRE----------LSGFAIWMYSLIANCW--SKCPQ 235 (457)
Q Consensus 170 ~~~~~ydp~~~~W~~l~~~p~~~~-~~~~~~~~~~~~~-~lyv~GG~----------~~~~~v~~yd~~t~~W--~~l~~ 235 (457)
..++.+|..+++..... .+ .. ... ..-+ ++ .||+.... .....++.++..+..= ..+-.
T Consensus 155 ~~i~v~dl~tg~~~~~~-~~--~~k~~~---~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~ 227 (693)
T 3iuj_A 155 REIHLMDVESKQPLETP-LK--DVKFSG---ISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFG 227 (693)
T ss_dssp EEEEEEETTTCSEEEEE-EE--EEESCC---CEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEES
T ss_pred EEEEEEECCCCCCCccc-cC--Cceecc---EEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEe
Confidence 45677888888764431 11 11 111 1233 44 45544322 1235688888776542 11111
Q ss_pred CCC--CccceeE-EeeCCEEEEEeeecCCCCccceEEEEeCCCC--cEEECCCCCCCCcceeEEEECCEEEEEeccCCCC
Q 012755 236 MNL--PRCLFGS-SSLGEVAIVAGGTDKNGCILKSAELYNSELG--TWETLPDMNLPRKLCSGFFMDGKFYIIGGMSSPT 310 (457)
Q Consensus 236 lp~--~r~~~~~-~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~--~W~~~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~ 310 (457)
.+. +....++ ..-+++..++....+. ..+.++++|..+. .|+.+........ ......++.+|+....+.
T Consensus 228 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~--~~~~i~~~d~~~~~~~~~~l~~~~~~~~-~~~~~~g~~l~~~t~~~~-- 302 (693)
T 3iuj_A 228 AIPAQHHRYVGATVTEDDRFLLISAANST--SGNRLYVKDLSQENAPLLTVQGDLDADV-SLVDNKGSTLYLLTNRDA-- 302 (693)
T ss_dssp CSGGGCCSEEEEEECTTSCEEEEEEESSS--SCCEEEEEETTSTTCCCEEEECSSSSCE-EEEEEETTEEEEEECTTC--
T ss_pred cCCCCCeEEEEEEEcCCCCEEEEEEccCC--CCcEEEEEECCCCCCceEEEeCCCCceE-EEEeccCCEEEEEECCCC--
Confidence 111 1111122 2234544444332221 2368999998766 6777643222211 113345788998865432
Q ss_pred CCCceEEEEECCCC---ceEEcCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEec--CCCeEEEEECCCCcEEEec
Q 012755 311 DPLTCGEEYNLETR---TWKRIENMYPSNVGTQSNPAMSSPPLVAVVNNQLYSADQ--ATNVVKKYNKTNNSWTVVK 382 (457)
Q Consensus 311 ~~~~~~~~yd~~t~---~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~ly~~gg--~~~~v~~Yd~~~~~W~~v~ 382 (457)
....++.+|+.+. .|+.+.+-.. .. . .....++.|++... ....++.+|.+++..+.+.
T Consensus 303 -~~~~l~~~d~~~~~~~~~~~l~~~~~----------~~-~-~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~ 366 (693)
T 3iuj_A 303 -PNRRLVTVDAANPGPAHWRDLIPERQ----------QV-L-TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVA 366 (693)
T ss_dssp -TTCEEEEEETTSCCGGGCEEEECCCS----------SC-E-EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEEC
T ss_pred -CCCEEEEEeCCCCCccccEEEecCCC----------CE-E-EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEee
Confidence 2457888998764 4887654322 11 1 44445667665532 2347899999876655553
No 295
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=67.59 E-value=1.1e+02 Score=30.92 Aligned_cols=152 Identities=11% Similarity=0.050 Sum_probs=81.8
Q ss_pred eCCEEEEEceecCCcEEEEEECCCCcEEe-CCC--C---CCCccceeEEee-CCEEEEEeeecCCCCccceEEEEeCCCC
Q 012755 204 VGTQLLVFGRELSGFAIWMYSLIANCWSK-CPQ--M---NLPRCLFGSSSL-GEVAIVAGGTDKNGCILKSAELYNSELG 276 (457)
Q Consensus 204 ~~~~lyv~GG~~~~~~v~~yd~~t~~W~~-l~~--l---p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~yd~~t~ 276 (457)
.++.+++.|+.+ ..+.+||..+++-.. +.. + .....-.+++.. +++.++.|+.+ ..+.++|..++
T Consensus 200 pdg~~las~s~D--~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D------~~v~lWd~~~~ 271 (611)
T 1nr0_A 200 PDGSLFASTGGD--GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD------KTIKIWNVATL 271 (611)
T ss_dssp TTSSEEEEEETT--SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTT
T ss_pred CCCCEEEEEECC--CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC------CeEEEEeCCCC
Confidence 366777777654 358888988776433 211 0 111111122222 56666777643 46888999888
Q ss_pred cEEECCCCCCCC-cceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-
Q 012755 277 TWETLPDMNLPR-KLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV- 354 (457)
Q Consensus 277 ~W~~~~~~p~~r-~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~- 354 (457)
+....-...... .....+..++...+.++.+ ..+..||+.+..-... +.. .......+.+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d------~~i~~~~~~~~~~~~~--~~g----------h~~~v~~l~~s 333 (611)
T 1nr0_A 272 KVEKTIPVGTRIEDQQLGIIWTKQALVSISAN------GFINFVNPELGSIDQV--RYG----------HNKAITALSSS 333 (611)
T ss_dssp EEEEEEECCSSGGGCEEEEEECSSCEEEEETT------CCEEEEETTTTEEEEE--ECC----------CSSCEEEEEEC
T ss_pred ceeeeecCCCCccceeEEEEEcCCEEEEEeCC------CcEEEEeCCCCCcceE--EcC----------CCCCEEEEEEe
Confidence 765422111111 1222333466655555433 3467788877652221 111 1112222223
Q ss_pred -CCEEEEEecCCCeEEEEECCCCcEEEe
Q 012755 355 -NNQLYSADQATNVVKKYNKTNNSWTVV 381 (457)
Q Consensus 355 -~g~ly~~gg~~~~v~~Yd~~~~~W~~v 381 (457)
+|+.++.++..+.|..||..+..-..+
T Consensus 334 pdg~~l~s~s~D~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 334 ADGKTLFSADAEGHINSWDISTGISNRV 361 (611)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEEEC
T ss_pred CCCCEEEEEeCCCcEEEEECCCCceeee
Confidence 677777777888999999998766543
No 296
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=66.94 E-value=76 Score=32.57 Aligned_cols=105 Identities=9% Similarity=-0.122 Sum_probs=49.9
Q ss_pred EEEEEECCCCcEEeCCCCCCCc--cceeE-EeeCCEEEEEeeecCCC---CccceEEEEeCCCCcEEECCCCCCCC--cc
Q 012755 219 AIWMYSLIANCWSKCPQMNLPR--CLFGS-SSLGEVAIVAGGTDKNG---CILKSAELYNSELGTWETLPDMNLPR--KL 290 (457)
Q Consensus 219 ~v~~yd~~t~~W~~l~~lp~~r--~~~~~-~~~~~~iyv~GG~~~~~---~~~~~v~~yd~~t~~W~~~~~~p~~r--~~ 290 (457)
.++++|..+++-..+-...... ..... ..-+++.++++..+... .....++++|..+++-+.+....... ..
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~ 117 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQ 117 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCS
T ss_pred CEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccccccc
Confidence 6788888877654432211100 01112 22356655555432211 12368999999988766664432211 11
Q ss_pred eeEEEECCEEEEEeccCCCCCCCceEEEEECCCCceEEcC
Q 012755 291 CSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIE 330 (457)
Q Consensus 291 ~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~ 330 (457)
.....-+|+..+++.. ..++++|..++.-..+.
T Consensus 118 ~~~~SPdG~~la~~~~-------~~i~~~~~~~g~~~~~~ 150 (723)
T 1xfd_A 118 YAGWGPKGQQLIFIFE-------NNIYYCAHVGKQAIRVV 150 (723)
T ss_dssp BCCBCSSTTCEEEEET-------TEEEEESSSSSCCEEEE
T ss_pred ccEECCCCCEEEEEEC-------CeEEEEECCCCceEEEe
Confidence 1111224443333321 25666777666555443
No 297
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=66.82 E-value=1.4e+02 Score=32.01 Aligned_cols=193 Identities=8% Similarity=-0.028 Sum_probs=89.2
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDM 284 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~ 284 (457)
++.+++.|+.+ ..+.+||..+.+-.... +....-.+++...++..+.|+.+ ..+.++|..+++-...-..
T Consensus 28 dg~~lAsgs~D--g~I~lw~~~~~~~~~~~--~~~~~V~~l~fspg~~L~S~s~D------~~v~lWd~~~~~~~~~~~~ 97 (902)
T 2oaj_A 28 TQNLLAIATVT--GEVHIYGQQQVEVVIKL--EDRSAIKEMRFVKGIYLVVINAK------DTVYVLSLYSQKVLTTVFV 97 (902)
T ss_dssp TTTEEEEEETT--SEEEEECSTTCEEEEEC--SSCCCEEEEEEETTTEEEEEETT------CEEEEEETTTCSEEEEEEC
T ss_pred CCCEEEEEeCC--CEEEEEeCCCcEEEEEc--CCCCCEEEEEEcCCCEEEEEECc------CeEEEEECCCCcEEEEEcC
Confidence 44455555433 35667776654432211 11111122333335544444432 4688889887753221111
Q ss_pred CCCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcC--CC----CCCCCCCCCCCCCCCCCEEEEE--
Q 012755 285 NLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIE--NM----YPSNVGTQSNPAMSSPPLVAVV-- 354 (457)
Q Consensus 285 p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~--~~----~~~~~~~~~~~~~r~~~~~~~~-- 354 (457)
+ .....+.+ ++...+.|+.+ ..+..||..+..-.... .. ..+ . .......+++..
T Consensus 98 ~---~~V~~v~~sp~g~~l~sgs~d------g~V~lwd~~~~~~~~~~i~~~~~~~~~~----~--~h~~~V~sl~~sp~ 162 (902)
T 2oaj_A 98 P---GKITSIDTDASLDWMLIGLQN------GSMIVYDIDRDQLSSFKLDNLQKSSFFP----A--ARLSPIVSIQWNPR 162 (902)
T ss_dssp S---SCEEEEECCTTCSEEEEEETT------SCEEEEETTTTEEEEEEECCHHHHHTCS----S--SCCCCCCEEEEETT
T ss_pred C---CCEEEEEECCCCCEEEEEcCC------CcEEEEECCCCccccceecccccccccc----c--cCCCCeEEEEEccC
Confidence 1 11112222 45555555432 35788998887643111 00 000 0 001112233333
Q ss_pred CCEEEEEecCCCeEEEEECCCCcEEEeccCC--C-c---------cCCCCcceEEE-EEeCCEEEEEcCcCCCCCceEEE
Q 012755 355 NNQLYSADQATNVVKKYNKTNNSWTVVKRLP--V-R---------ANSFNGWGLAF-KACGNSLLVIGGHRELQGEIIVL 421 (457)
Q Consensus 355 ~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p--~-~---------~~~~~~~~~~~-~~~~g~lyv~GG~~~~~~~~~~v 421 (457)
++.++++|...+.+ .||..++.-...-... . . ...+...-..+ ..-+|+.++.|+.++ .+
T Consensus 163 ~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg------~i 235 (902)
T 2oaj_A 163 DIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDN------SL 235 (902)
T ss_dssp EEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTC------CE
T ss_pred CCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCC------eE
Confidence 23577778777888 9999887543321111 0 0 00010111112 122677788887764 47
Q ss_pred EEeeCCCC
Q 012755 422 HSWDPTDG 429 (457)
Q Consensus 422 ~~y~~~~~ 429 (457)
.+||..++
T Consensus 236 ~lWd~~~g 243 (902)
T 2oaj_A 236 VFWDANSG 243 (902)
T ss_dssp EEEETTTC
T ss_pred EEEECCCC
Confidence 88888764
No 298
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=65.96 E-value=1.2e+02 Score=31.01 Aligned_cols=174 Identities=11% Similarity=-0.010 Sum_probs=94.0
Q ss_pred EEEEEECCCCcEEeCCCCCCCccceeEEee--CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEE-
Q 012755 219 AIWMYSLIANCWSKCPQMNLPRCLFGSSSL--GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFF- 295 (457)
Q Consensus 219 ~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~- 295 (457)
++...|..+..-..+-+++.-+...+++.- ++.||+.-- ....+.++++.....+.+...... .-.++++
T Consensus 16 ~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~------~~~~I~r~~~~g~~~~~v~~~g~~-~P~GlAvD 88 (628)
T 4a0p_A 16 DIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDI------SLKTISRAFMNGSALEHVVEFGLD-YPEGMAVD 88 (628)
T ss_dssp EEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCSCEEEECSSCS-CCCEEEEE
T ss_pred cEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEEC------CCCeEEEEECCCCCcEEEEeCCCC-CcceEEEE
Confidence 466666665433332233222223344332 689999843 235788888876655544322111 1123444
Q ss_pred -ECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEe-cCCCeEEEE
Q 012755 296 -MDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSAD-QATNVVKKY 371 (457)
Q Consensus 296 -~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~g-g~~~~v~~Y 371 (457)
.+++||+... ....++++++....=+.+.. .. .....++++- +|.||... +....|++.
T Consensus 89 ~~~~~LY~tD~------~~~~I~v~~~dG~~~~~l~~-~~----------l~~P~~iavdp~~G~lY~tD~g~~~~I~r~ 151 (628)
T 4a0p_A 89 WLGKNLYWADT------GTNRIEVSKLDGQHRQVLVW-KD----------LDSPRALALDPAEGFMYWTEWGGKPKIDRA 151 (628)
T ss_dssp TTTTEEEEEET------TTTEEEEEETTSTTCEEEEC-SS----------CCCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred eCCCEEEEEEC------CCCEEEEEecCCCcEEEEEe-CC----------CCCcccEEEccCCCeEEEeCCCCCCEEEEE
Confidence 3689999743 24578999987654333321 01 1112245554 68999987 446789999
Q ss_pred ECCCCcEEEec-cCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 372 NKTNNSWTVVK-RLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 372 d~~~~~W~~v~-~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
+++...-+.+. .+..+ .|+++...+++||+.-... ..|+.++.+.
T Consensus 152 ~~dG~~~~~l~~~~~~P------~GlalD~~~~~LY~aD~~~------~~I~~~d~dG 197 (628)
T 4a0p_A 152 AMDGSERTTLVPNVGRA------NGLTIDYAKRRLYWTDLDT------NLIESSNMLG 197 (628)
T ss_dssp ETTSCSCEEEECSCSSE------EEEEEETTTTEEEEEETTT------TEEEEEETTS
T ss_pred eCCCCceEEEECCCCCc------ceEEEccccCEEEEEECCC------CEEEEEcCCC
Confidence 99877655443 22211 1333333368899875332 1456666543
No 299
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=63.15 E-value=1.1e+02 Score=32.01 Aligned_cols=109 Identities=8% Similarity=-0.031 Sum_probs=59.3
Q ss_pred CEEEEEceecCCcEEEEEECCCC--cE--EeCCCCCCCccceeEE-eeCCEEEEEeeecCCCCccceEEEEeCCC-CcEE
Q 012755 206 TQLLVFGRELSGFAIWMYSLIAN--CW--SKCPQMNLPRCLFGSS-SLGEVAIVAGGTDKNGCILKSAELYNSEL-GTWE 279 (457)
Q Consensus 206 ~~lyv~GG~~~~~~v~~yd~~t~--~W--~~l~~lp~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~v~~yd~~t-~~W~ 279 (457)
..|++.......+.++++|..+. .+ +.+.+-.. ...+... ..++.+|+..-.++ .....++.+|..+ ..|+
T Consensus 283 ~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~-~~~~s~~~~~g~~l~~~t~~~~--a~~~~L~~~d~~~~~~~~ 359 (751)
T 2xe4_A 283 NTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREK-GVRYDVQMHGTSHLVILTNEGG--AVNHKLLIAPRGQPSDWS 359 (751)
T ss_dssp SEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCT-TCCEEEEEETTTEEEEEECTTT--CTTCEEEEEETTSTTCCC
T ss_pred CEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCC-CceEEEeeeeCCEEEEEeCCCC--CCCcEEEEEcCCCcccce
Confidence 34555444445678999999875 46 55532111 1112222 33788888865431 1245788999876 6787
Q ss_pred E-CCCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEEC
Q 012755 280 T-LPDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNL 321 (457)
Q Consensus 280 ~-~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~ 321 (457)
. +-+.............++.|++....++ ...++++|+
T Consensus 360 ~~li~~~~~~~l~~~~~~~~~lv~~~~~~g----~~~l~~~dl 398 (751)
T 2xe4_A 360 HVLVDHSEDVFMESIAVRSNYLVVAGRRAG----LTRIWTMMA 398 (751)
T ss_dssp CEEECCCSSEEEEEEEECSSEEEEEEEETT----EEEEEEEEC
T ss_pred eeEECCCCCcEEEEEEEECCEEEEEEEeCC----EEEEEEEec
Confidence 6 3221111111223334677777654332 356788886
No 300
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=62.85 E-value=1.5e+02 Score=30.81 Aligned_cols=198 Identities=10% Similarity=0.038 Sum_probs=98.9
Q ss_pred eCCEEEEEceec-CC--cEEEEEECCCCcEEeCCCCCCCccce-eEEe-eCCEEEEEeeecCCC--------CccceEEE
Q 012755 204 VGTQLLVFGREL-SG--FAIWMYSLIANCWSKCPQMNLPRCLF-GSSS-LGEVAIVAGGTDKNG--------CILKSAEL 270 (457)
Q Consensus 204 ~~~~lyv~GG~~-~~--~~v~~yd~~t~~W~~l~~lp~~r~~~-~~~~-~~~~iyv~GG~~~~~--------~~~~~v~~ 270 (457)
.+|+.++++... .. ..++++|..+++..... . +.... ..+- -+..|++ +..+... .....+++
T Consensus 172 PDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~--~~~~~~~~~wspD~~l~~-~~~~~~~~~~~~~~~~~~~~v~~ 247 (741)
T 1yr2_A 172 DDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-L--KWVKFSGLAWLGNDALLY-SRFAEPKEGQAFQALNYNQTVWL 247 (741)
T ss_dssp TTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-E--EEEESCCCEESTTSEEEE-EECCCC--------CCCCCEEEE
T ss_pred CCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-C--CCceeccEEEECCCEEEE-EEecCcccccccccCCCCCEEEE
Confidence 356555554332 22 46999999999875531 1 11111 1111 1333433 3332210 12356788
Q ss_pred EeCCCCcE--EECCCCCC-CCcceeE-EEECCEEEEEeccCCCCCCCceEEEEECCCC--c-eEEcCCCCCCCCCCCCCC
Q 012755 271 YNSELGTW--ETLPDMNL-PRKLCSG-FFMDGKFYIIGGMSSPTDPLTCGEEYNLETR--T-WKRIENMYPSNVGTQSNP 343 (457)
Q Consensus 271 yd~~t~~W--~~~~~~p~-~r~~~~~-~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~--~-W~~~~~~~~~~~~~~~~~ 343 (457)
++..++.- ..+-..+. +...... ..-+|+..++....... ..+.++.+|..+. . |..+.....
T Consensus 248 ~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~-~~~~l~~~d~~~~~~~~~~~l~~~~~--------- 317 (741)
T 1yr2_A 248 HRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTD-PVNTVHVARVTNGKIGPVTALIPDLK--------- 317 (741)
T ss_dssp EETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTC-SCCEEEEEEEETTEECCCEEEECSSS---------
T ss_pred EECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCC-CcceEEEEECCCCCCcccEEecCCCC---------
Confidence 88766541 11211111 1112222 22366544443332211 2567889999877 6 887754322
Q ss_pred CCCCCCEEEEECCEEEEEec---CCCeEEEEECCC--CcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCce
Q 012755 344 AMSSPPLVAVVNNQLYSADQ---ATNVVKKYNKTN--NSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEI 418 (457)
Q Consensus 344 ~~r~~~~~~~~~g~ly~~gg---~~~~v~~Yd~~~--~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~ 418 (457)
... ..+...++.||+... ....++.+|.++ ..|+.+-+-.... . ..+...++.|++....++ .
T Consensus 318 -~~~-~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~-----l-~~~~~~~~~lv~~~~~dg----~ 385 (741)
T 1yr2_A 318 -AQW-DFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDN-----L-ESVGIAGNRLFASYIHDA----K 385 (741)
T ss_dssp -SCE-EEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSE-----E-EEEEEEBTEEEEEEEETT----E
T ss_pred -ceE-EEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCe-----E-EEEEEECCEEEEEEEECC----E
Confidence 111 112234667777753 245799999988 5798875321111 1 122334788888775543 2
Q ss_pred EEEEEeeCC
Q 012755 419 IVLHSWDPT 427 (457)
Q Consensus 419 ~~v~~y~~~ 427 (457)
..+++++.+
T Consensus 386 ~~l~~~~~~ 394 (741)
T 1yr2_A 386 SQVLAFDLD 394 (741)
T ss_dssp EEEEEEETT
T ss_pred EEEEEEeCC
Confidence 467777764
No 301
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=62.06 E-value=1.1e+02 Score=29.04 Aligned_cols=63 Identities=11% Similarity=0.004 Sum_probs=37.0
Q ss_pred CCEEEEEecCCCeEEEEECCCCcEEEeccCCCcc-----CCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 355 NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRA-----NSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 355 ~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~-----~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
++++|++-| +..|+||..+++=. +.-|... ......-+++...++++|.|=|. ..+.||..+.
T Consensus 284 ~~~~yfFkG--~~yw~yd~~~~~v~--~gyPk~I~~~f~g~p~~iDaA~~~~~g~~YfFkg~--------~ywr~d~~~~ 351 (365)
T 3ba0_A 284 FYRTYFFVD--NQYWRYDERRQMMD--PGYPKLITKNFQGIGPKIDAVFYSKNKYYYFFQGS--------NQFEYDFLLQ 351 (365)
T ss_dssp TTEEEEEET--TEEEEEETTTTEEC--SSCCCCHHHHSTTCCSSCSEEEEETTTEEEEEETT--------EEEEEETTTT
T ss_pred CCEEEEEEC--CEEEEEeCCcceec--CCCCcchhhcCCCCCCccceeeEecCCcEEEEeCC--------EEEEEECCcc
Confidence 589999966 68999998765321 1111110 00001123333338899999774 3788998774
No 302
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=61.63 E-value=1.6e+02 Score=30.88 Aligned_cols=213 Identities=12% Similarity=0.081 Sum_probs=106.6
Q ss_pred ccEEEEEecCccEEEEeCCCCcEEeCCC-C-----CCCccccCCCeeeEEe----CCEEEEEcee----cCCcEEEEEEC
Q 012755 160 EHWVYLACILMPWEAFDPLRQRWMRLPR-M-----QCDECFTSADKESLAV----GTQLLVFGRE----LSGFAIWMYSL 225 (457)
Q Consensus 160 ~~~l~~~~~~~~~~~ydp~~~~W~~l~~-~-----p~~~~~~~~~~~~~~~----~~~lyv~GG~----~~~~~v~~yd~ 225 (457)
...+|+......++.-+-.-.+|..+.. + +...... .....+++ .+.+|+..|. .....+++-+-
T Consensus 33 ~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~-~~~~~ia~dp~~~~~~~~~~g~~~~~~~~~~i~~S~D 111 (763)
T 3a0f_A 33 KDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANL-LGTESIALDPHNPDRLYLAQGDYVQWDPWAAFLVSDD 111 (763)
T ss_dssp TTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCC-CSEEEEECCTTCTTCEEEEECSCTTTCSCCEEEEESS
T ss_pred CCEEEEEeccCcEEEECCCCCCeeECccCccccccCCCcccc-cceeEEEECCCCCCEEEEEecccccCCCCceEEEECC
Confidence 3567776655567777777889999875 3 2110000 11112332 3578876542 11234555555
Q ss_pred CCCcEEeCCC-CC-----CCccc-eeEEee---CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCC---ccee
Q 012755 226 IANCWSKCPQ-MN-----LPRCL-FGSSSL---GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPR---KLCS 292 (457)
Q Consensus 226 ~t~~W~~l~~-lp-----~~r~~-~~~~~~---~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r---~~~~ 292 (457)
.-.+|+++.. .+ ..|.. ..+++. .+.+|+.+. ...+++=+-.-.+|+.+..++... ....
T Consensus 112 gG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~-------~~~l~~S~DgG~TW~~~~~~~~~~~~~~~~~ 184 (763)
T 3a0f_A 112 RGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSR-------TQGLWRSTDRAQTWSRMNQLPDSSTYGIGII 184 (763)
T ss_dssp TTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECS-------SSCEEEESSTTSSCEECTTSCCCSCTTTCEE
T ss_pred CCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeC-------CCcEEEECCCCcCccccccCcccCCCccceE
Confidence 5678988742 11 12221 233332 367777531 123333233345799987666432 1222
Q ss_pred EEEE----CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCC----------CCCCCCCCCCCCCEEEEE-CCE
Q 012755 293 GFFM----DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSN----------VGTQSNPAMSSPPLVAVV-NNQ 357 (457)
Q Consensus 293 ~~~~----~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~----------~~~~~~~~~r~~~~~~~~-~g~ 357 (457)
.+.+ .+.+|+.....+ .+++=+-.-.+|+.+...+... .+..........+.++.. ++.
T Consensus 185 ~i~~~p~~~~~~~~~~~~~g------~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~ 258 (763)
T 3a0f_A 185 SVIFDPKNVGTAYVASHAVG------GLWVTWDGGANWSQVGGQPTQWSDWTKSIVAASGTAIQSSGPLPIKIALGKNGR 258 (763)
T ss_dssp EEEECSSSTTCEEEEESSTT------CEEEESSSSSSCEECTTCCCSCCHHHHHHHHHHCCCCSSSSCEEEEEEECTTSC
T ss_pred EEEECCCCCCEEEEEEeCCC------eEEEECCCCCCccccCCCccccccccccccccccccccCCCCcceeEEECCCCc
Confidence 2233 246887643211 1222222345899987543200 000000001112222222 688
Q ss_pred EEEEe--------cCCCeEEEEECCCCcEEEeccCCC
Q 012755 358 LYSAD--------QATNVVKKYNKTNNSWTVVKRLPV 386 (457)
Q Consensus 358 ly~~g--------g~~~~v~~Yd~~~~~W~~v~~~p~ 386 (457)
||+.. +....+++++-...+|+.+...|.
T Consensus 259 l~~~~~~~~~~~~~~~g~v~rS~D~G~tW~~~~~~~~ 295 (763)
T 3a0f_A 259 LYITYSDAPGPWGVLYGEVWSYDPTNGNWKHITPSRE 295 (763)
T ss_dssp EEEEEESSCSSSCCCCEEEEEEETTTTEEEECCTTSS
T ss_pred EEEEeccCCCCCCCcceeEEEEeCCCCceEECCCCCC
Confidence 89883 345689999999999999876553
No 303
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=59.57 E-value=1.2e+02 Score=29.45 Aligned_cols=73 Identities=15% Similarity=0.187 Sum_probs=42.0
Q ss_pred CCEEEEEeccCCCC---CCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEE-ECC--EEEEEecCCCeEEE
Q 012755 297 DGKFYIIGGMSSPT---DPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAV-VNN--QLYSADQATNVVKK 370 (457)
Q Consensus 297 ~g~iyv~GG~~~~~---~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~g--~ly~~gg~~~~v~~ 370 (457)
++++||.-.....+ ...+.+.++|+.+.+ .+..++. .....++++ -+| .+|+.....+.|.+
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~k--vv~~I~v----------g~~P~gia~spDg~~~lyv~n~~s~~VsV 397 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGE--RINKIEL----------GHEIDSINVSQDAEPLLYALSAGTQTLHI 397 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCC--EEEEEEE----------EEEECEEEECCSSSCEEEEEETTTTEEEE
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCe--EEEEEEC----------CCCcCeEEEccCCCEEEEEEcCCCCeEEE
Confidence 47899974322111 124679999988865 2322222 111223333 244 57777666899999
Q ss_pred EECCCCcEEEecc
Q 012755 371 YNKTNNSWTVVKR 383 (457)
Q Consensus 371 Yd~~~~~W~~v~~ 383 (457)
+|..+. +.++.
T Consensus 398 ID~~t~--kvv~t 408 (426)
T 3c75_H 398 YDAATG--EELRS 408 (426)
T ss_dssp EETTTC--CEEEE
T ss_pred EECCCC--CEEEE
Confidence 998875 44444
No 304
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=59.23 E-value=91 Score=27.21 Aligned_cols=143 Identities=15% Similarity=0.181 Sum_probs=72.4
Q ss_pred eCCEEEEEeeecCCCCccceEEEEeCCCCcE--EEC----CCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEEC
Q 012755 248 LGEVAIVAGGTDKNGCILKSAELYNSELGTW--ETL----PDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNL 321 (457)
Q Consensus 248 ~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W--~~~----~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~ 321 (457)
.++++|+|-| ...|+++.....+ ..+ +.+|. .--++...+|++|++-| +..++|+.
T Consensus 27 ~~g~~yfFkg--------~~~Wr~~~~~~~~~p~~Is~~wpgLP~--~IDAA~~~~~~~yfFkG--------~~yw~~~~ 88 (219)
T 1hxn_A 27 NHGATYVFSG--------SHYWRLDTNRDGWHSWPIAHQWPQGPS--TVDAAFSWEDKLYLIQD--------TKVYVFLT 88 (219)
T ss_dssp TTSCEEEEET--------TEEEESSSSSCTTCCEEGGGTCTTSCS--SCSEEEEETTEEEEEET--------TEEEEEEC
T ss_pred CCCcEEEEeC--------CEEEEEcCCCCCCCceEhhhhccCCCC--CccEEEEECCcEEEecC--------CEEEEEeC
Confidence 4788999965 3445555432211 111 22332 12234445999999955 35788886
Q ss_pred CCCceEEcCCCCCCC---CCCCCCCCC--CCCCEEEE-E--CCEEEEEecCCCeEEEEECCCC---cEEEeccCCCccCC
Q 012755 322 ETRTWKRIENMYPSN---VGTQSNPAM--SSPPLVAV-V--NNQLYSADQATNVVKKYNKTNN---SWTVVKRLPVRANS 390 (457)
Q Consensus 322 ~t~~W~~~~~~~~~~---~~~~~~~~~--r~~~~~~~-~--~g~ly~~gg~~~~v~~Yd~~~~---~W~~v~~~p~~~~~ 390 (457)
.++ .+..+.-|.+- .|. |.. .....+|. . ++++|++-| +..|.||..+. .|...+.+|....
T Consensus 89 ~~~-~~~~~gyPk~i~~~~G~---p~~~~~~~IDAA~~~~~~gk~yfFkG--~~ywr~d~~~~P~~i~~~~~g~p~~vd- 161 (219)
T 1hxn_A 89 KGG-YTLVNGYPKRLEKELGS---PPVISLEAVDAAFVCPGSSRLHIMAG--RRLWWLDLKSGAQATWTELPWPHEKVD- 161 (219)
T ss_dssp SSS-CEECTTCCEEHHHHHCC---CSSCCCSCCCEEECCTTCCEEEEEET--TEEEEEEGGGGGGCCCEEECCSCSCCS-
T ss_pred CCC-ceecCCCCeehhhccCC---CCcccccccceeEEecCCCEEEEEeC--CEEEEEeCCCCceEhhhcCCCCCCCcC-
Confidence 532 11121111000 000 111 11223333 2 589999976 57899997542 4544444433322
Q ss_pred CCcceEEEEE-----------eCCEEEEEcCcCCCCCceEEEEEeeCCC
Q 012755 391 FNGWGLAFKA-----------CGNSLLVIGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 391 ~~~~~~~~~~-----------~~g~lyv~GG~~~~~~~~~~v~~y~~~~ 428 (457)
+++.. .++.+|.|-|. ..+.|+..+
T Consensus 162 -----Aa~~~~~~~~~~~~~~~~~~~YFFkg~--------~y~r~~~~~ 197 (219)
T 1hxn_A 162 -----GALCMEKPLGPNSCSTSGPNLYLIHGP--------NLYCYRHVD 197 (219)
T ss_dssp -----EEEEESSCSSSCCSCSSSCEEEEEETT--------EEEEESSHH
T ss_pred -----EEEEccccccccceeccCCeEEEEECC--------EEEEEeCCc
Confidence 33331 35678998775 366677654
No 305
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=56.81 E-value=1.3e+02 Score=28.24 Aligned_cols=28 Identities=4% Similarity=0.191 Sum_probs=21.8
Q ss_pred CCEEEEEecCCCeEEEEECCCCcEEEec
Q 012755 355 NNQLYSADQATNVVKKYNKTNNSWTVVK 382 (457)
Q Consensus 355 ~g~ly~~gg~~~~v~~Yd~~~~~W~~v~ 382 (457)
++..++.|+..+.|..||..++.-..+.
T Consensus 353 ~~~~l~s~s~dg~v~iwd~~~~~~~~~~ 380 (447)
T 3dw8_B 353 SDSVVMTGSYNNFFRMFDRNTKRDITLE 380 (447)
T ss_dssp TSSEEEEECSTTEEEEEETTTCCEEEEE
T ss_pred CCCEEEEeccCCEEEEEEcCCCcceeee
Confidence 5666678888889999999988765543
No 306
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=54.04 E-value=1.6e+02 Score=28.49 Aligned_cols=148 Identities=16% Similarity=0.250 Sum_probs=82.0
Q ss_pred CCCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCC-----C-ceEEcCCCCCCCCCCCCCCCCCCCCEEEEE
Q 012755 281 LPDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLET-----R-TWKRIENMYPSNVGTQSNPAMSSPPLVAVV 354 (457)
Q Consensus 281 ~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t-----~-~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 354 (457)
++..|....-|+.+.+++.-|++|-..+.-........|-+.. . .=+.++.... .....+++-.+
T Consensus 277 L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey~---------~~AsEPCvkyY 347 (670)
T 3ju4_A 277 LGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEYE---------PDASEPCIKYY 347 (670)
T ss_dssp CCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGGC---------TTEEEEEEEEE
T ss_pred cccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhhc---------cccccchhhhh
Confidence 4555655567888999888888875554433333334443221 1 1122222111 01223445567
Q ss_pred CCEEEEEec-----C-CCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCC-------------
Q 012755 355 NNQLYSADQ-----A-TNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQ------------- 415 (457)
Q Consensus 355 ~g~ly~~gg-----~-~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~------------- 415 (457)
+|.||+.-- . -..+.+-+.....|+.+. .|.... +..+..+..++.||+||-....+
T Consensus 348 dgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slr-fp~nvH---htnlPFakvgD~l~mFgsERA~nEWE~G~pD~RY~a 423 (670)
T 3ju4_A 348 DGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLR-FPHNVH---HTTLPFAKVGDDLIMFGSERAENEWEAGAPDDRYKA 423 (670)
T ss_dssp TTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEE-CTTCCC---SSCCCEEEETTEEEEEEECSSTTCSSTTCCCCCSSC
T ss_pred CCEEEEEecCcCCCCCcceeeeecccCCchhhee-cccccc---ccCCCcceeCCEEEEEeccccccccccCCCcccccc
Confidence 999999841 1 235777777888999874 333322 22344568899999998432111
Q ss_pred CceEEEEEeeCCCCCC--CCCCeeEeccc
Q 012755 416 GEIIVLHSWDPTDGNS--GEAQWNELAVR 442 (457)
Q Consensus 416 ~~~~~v~~y~~~~~~w--~~~~W~~l~~~ 442 (457)
......+ -...-++| .+.||..|...
T Consensus 424 ~yPRtF~-~r~nv~~W~~d~~ew~nItdq 451 (670)
T 3ju4_A 424 SYPRTFY-ARLNVNNWNADDIEWVNITDQ 451 (670)
T ss_dssp BCCEEEE-EEEETTTCCCTTCCCEEEEEC
T ss_pred cCCceEE-EEeecccCCccceEEEEeecc
Confidence 0112222 23333457 57799999863
No 307
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=53.66 E-value=53 Score=28.91 Aligned_cols=101 Identities=8% Similarity=-0.023 Sum_probs=55.5
Q ss_pred eCCEEEEEceecCCcEEEEEE--CC-------------CCcEEeCCCCC-CCccceeEEe-eCCEEEEEeeecCCCCccc
Q 012755 204 VGTQLLVFGRELSGFAIWMYS--LI-------------ANCWSKCPQMN-LPRCLFGSSS-LGEVAIVAGGTDKNGCILK 266 (457)
Q Consensus 204 ~~~~lyv~GG~~~~~~v~~yd--~~-------------t~~W~~l~~lp-~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~ 266 (457)
.++.+|+|-|. .+|+|+ +. +..|..+|.-. ......+... .++++|+|-| +
T Consensus 71 ~~g~~~fFKg~----~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~IDAA~~~~~~~k~yfFkG--------~ 138 (227)
T 3lp9_A 71 ENNEAFIFYEN----FCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGIDAAYRSTRGKEVYLFKG--------D 138 (227)
T ss_dssp STTEEEEEETT----EEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCSEEEECSSTTEEEEEET--------T
T ss_pred CCCEEEEEeCC----EEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCcccEEEEECCCCEEEEEEC--------C
Confidence 57899998763 678888 32 12243343110 1122222222 2689999976 4
Q ss_pred eEEEEeCCCCcEEEC-C-----CCCCCC-----cceeEEEE---CCEEEEEeccCCCCCCCceEEEEECCCC
Q 012755 267 SAELYNSELGTWETL-P-----DMNLPR-----KLCSGFFM---DGKFYIIGGMSSPTDPLTCGEEYNLETR 324 (457)
Q Consensus 267 ~v~~yd~~t~~W~~~-~-----~~p~~r-----~~~~~~~~---~g~iyv~GG~~~~~~~~~~~~~yd~~t~ 324 (457)
..++||..+++-..- | .+|... ....+|+. +|++|.+-| +..++||..++
T Consensus 139 ~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg--------~~Ywr~d~~~~ 202 (227)
T 3lp9_A 139 QYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD--------DHYARVKVTPX 202 (227)
T ss_dssp EEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET--------TEEEEEECCSS
T ss_pred EEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC--------CEEEEEECCcc
Confidence 688999876642210 0 012100 12233443 589999965 35688888775
No 308
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=53.05 E-value=1.1e+02 Score=26.48 Aligned_cols=146 Identities=14% Similarity=0.130 Sum_probs=74.3
Q ss_pred eEEeCCEEEEEceecCCcEEEEEECCCCc-E--EeC----CCCCCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEe
Q 012755 201 SLAVGTQLLVFGRELSGFAIWMYSLIANC-W--SKC----PQMNLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYN 272 (457)
Q Consensus 201 ~~~~~~~lyv~GG~~~~~~v~~yd~~t~~-W--~~l----~~lp~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd 272 (457)
+....+.+|+|-|. .+|+++..... . ..+ +.+|. ....+... .++++|+|-| +..|+||
T Consensus 36 i~~~~g~~~fFkg~----~~Wr~~~~~~~~~~P~~I~~~wp~lp~-~IDAA~~~~~~~k~yfFkG--------~~yW~y~ 102 (218)
T 1gen_A 36 IAQIRGEIFFFKDR----FIWRTVTPRDKPMGPLLVATFWPELPE-KIDAVYEAPQEEKAVFFAG--------NEYWIYS 102 (218)
T ss_dssp EEEETTEEEEEETT----EEEEESSTTSCCEEEEEGGGTCTTSCS-CCSEEEEETTTTEEEEEET--------TEEEEEE
T ss_pred EEeCCCcEEEEECC----EEEEEeCCCCccCCCEEHHHhcCCCCC-CccEEEEECCCCEEEEEeC--------CEEEEEc
Confidence 45578999998663 46666554321 1 111 23332 22222221 2689999966 4678888
Q ss_pred CCCCc--E-EECCC--CCCCCcceeEEEE---CCEEEEEeccCCCCCCCceEEEEECCCCceE-----EcCCCCCCCCCC
Q 012755 273 SELGT--W-ETLPD--MNLPRKLCSGFFM---DGKFYIIGGMSSPTDPLTCGEEYNLETRTWK-----RIENMYPSNVGT 339 (457)
Q Consensus 273 ~~t~~--W-~~~~~--~p~~r~~~~~~~~---~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~-----~~~~~~~~~~~~ 339 (457)
..+-. + +.+.. +|.......+|.. +|++|.+-| +..++||..+++=. .+..... |.
T Consensus 103 ~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG--------~~ywr~d~~~~~v~~gyPr~i~~~w~---g~ 171 (218)
T 1gen_A 103 ASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG--------DKFWRYNEVKKKMDPGFPKLIADAWN---AI 171 (218)
T ss_dssp TTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET--------TEEEEEETTTTEECSSCCEEHHHHSS---SC
T ss_pred CccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC--------CEEEEEECccccccCCCCcchhhccC---CC
Confidence 52100 0 11111 2221112233332 689999955 35788998765321 1110000 00
Q ss_pred CCCCCCCCCCEEEEEC--CEEEEEecCCCeEEEEECCCCc
Q 012755 340 QSNPAMSSPPLVAVVN--NQLYSADQATNVVKKYNKTNNS 377 (457)
Q Consensus 340 ~~~~~~r~~~~~~~~~--g~ly~~gg~~~~v~~Yd~~~~~ 377 (457)
+....++...+ |.+|.+-| +..|.||..+..
T Consensus 172 -----p~~idaAf~~~~~g~~YfFkg--~~y~~~~~~~~~ 204 (218)
T 1gen_A 172 -----PDNLDAVVDLQGGGHSYFFKG--AYYLKLENQSLK 204 (218)
T ss_dssp -----CSSCSEEEECTTTCEEEEEET--TEEEEEETTEEE
T ss_pred -----CCCCCEEEEEcCCCcEEEEEC--CEEEEEECCcee
Confidence 12223444444 89999965 578999886553
No 309
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=52.50 E-value=1.2e+02 Score=26.47 Aligned_cols=135 Identities=13% Similarity=0.117 Sum_probs=70.3
Q ss_pred eCCEEEEEceecCCcEEEEEECCCCcE--EeC----CCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCc
Q 012755 204 VGTQLLVFGRELSGFAIWMYSLIANCW--SKC----PQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGT 277 (457)
Q Consensus 204 ~~~~lyv~GG~~~~~~v~~yd~~t~~W--~~l----~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~ 277 (457)
.++.+|+|-|. .+|+++.....+ ..+ +.+|.. -. ++...++++|+|-| +..++|+..++.
T Consensus 27 ~~g~~yfFkg~----~~Wr~~~~~~~~~p~~Is~~wpgLP~~-ID-AA~~~~~~~yfFkG--------~~yw~~~~~~~~ 92 (219)
T 1hxn_A 27 NHGATYVFSGS----HYWRLDTNRDGWHSWPIAHQWPQGPST-VD-AAFSWEDKLYLIQD--------TKVYVFLTKGGY 92 (219)
T ss_dssp TTSCEEEEETT----EEEESSSSSCTTCCEEGGGTCTTSCSS-CS-EEEEETTEEEEEET--------TEEEEEECSSSC
T ss_pred CCCcEEEEeCC----EEEEEcCCCCCCCceEhhhhccCCCCC-cc-EEEEECCcEEEecC--------CEEEEEeCCCCc
Confidence 47889988653 467766533211 011 233322 22 23334899999965 468888865321
Q ss_pred EEECC----------CCCCC--CcceeEEEE---CCEEEEEeccCCCCCCCceEEEEECCCC---ceEEcCCCCCCCCCC
Q 012755 278 WETLP----------DMNLP--RKLCSGFFM---DGKFYIIGGMSSPTDPLTCGEEYNLETR---TWKRIENMYPSNVGT 339 (457)
Q Consensus 278 W~~~~----------~~p~~--r~~~~~~~~---~g~iyv~GG~~~~~~~~~~~~~yd~~t~---~W~~~~~~~~~~~~~ 339 (457)
+..+ .+|.. .....+|+. ++++|.+-| +..+.||..+. .|...+.++
T Consensus 93 -~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG--------~~ywr~d~~~~P~~i~~~~~g~p------ 157 (219)
T 1hxn_A 93 -TLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG--------RRLWWLDLKSGAQATWTELPWPH------ 157 (219)
T ss_dssp -EECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET--------TEEEEEEGGGGGGCCCEEECCSC------
T ss_pred -eecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC--------CEEEEEeCCCCceEhhhcCCCCC------
Confidence 1111 12222 112334432 689999965 34688986542 333322221
Q ss_pred CCCCCCCCCCEEEE------------ECCEEEEEecCCCeEEEEECCC
Q 012755 340 QSNPAMSSPPLVAV------------VNNQLYSADQATNVVKKYNKTN 375 (457)
Q Consensus 340 ~~~~~~r~~~~~~~------------~~g~ly~~gg~~~~v~~Yd~~~ 375 (457)
....++.. .++.+|.+-| +..+.||..+
T Consensus 158 ------~~vdAa~~~~~~~~~~~~~~~~~~~YFFkg--~~y~r~~~~~ 197 (219)
T 1hxn_A 158 ------EKVDGALCMEKPLGPNSCSTSGPNLYLIHG--PNLYCYRHVD 197 (219)
T ss_dssp ------SCCSEEEEESSCSSSCCSCSSSCEEEEEET--TEEEEESSHH
T ss_pred ------CCcCEEEEccccccccceeccCCeEEEEEC--CEEEEEeCCc
Confidence 11223333 2467999865 5777887643
No 310
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=51.21 E-value=1.5e+02 Score=27.44 Aligned_cols=73 Identities=11% Similarity=0.164 Sum_probs=43.2
Q ss_pred CCEEEEEeccCCC----CCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-CC-EEEEEecCCCeEEE
Q 012755 297 DGKFYIIGGMSSP----TDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV-NN-QLYSADQATNVVKK 370 (457)
Q Consensus 297 ~g~iyv~GG~~~~----~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~g-~ly~~gg~~~~v~~ 370 (457)
++++|+....++. ......+.++|+++.+ .+..++. .. ..+++.. +| .||+.+. +.|.+
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~~----------~~-p~~ia~spdg~~l~v~n~--~~v~v 329 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIPG----------RD-ALSMTIDQQRNLMLTLDG--GNVNV 329 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEEC----------TT-CCEEEEETTTTEEEEECS--SCEEE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEec----------CC-eeEEEECCCCCEEEEeCC--CeEEE
Confidence 4789987541111 1124589999998874 4444443 22 3444443 44 5666653 99999
Q ss_pred EECCCCcEEEeccC
Q 012755 371 YNKTNNSWTVVKRL 384 (457)
Q Consensus 371 Yd~~~~~W~~v~~~ 384 (457)
||.++.+=+.+..+
T Consensus 330 ~D~~t~~l~~~~~i 343 (361)
T 2oiz_A 330 YDISQPEPKLLRTI 343 (361)
T ss_dssp EECSSSSCEEEEEE
T ss_pred EECCCCcceeeEEe
Confidence 99987632555543
No 311
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=50.77 E-value=2.3e+02 Score=29.56 Aligned_cols=150 Identities=7% Similarity=-0.016 Sum_probs=81.4
Q ss_pred CCcEEEEEECCC--CcEEeCCCCCCCccceeEEeeCCEEEEEeeec--C--CCCccceEEEEeCCC--------CcEEE-
Q 012755 216 SGFAIWMYSLIA--NCWSKCPQMNLPRCLFGSSSLGEVAIVAGGTD--K--NGCILKSAELYNSEL--------GTWET- 280 (457)
Q Consensus 216 ~~~~v~~yd~~t--~~W~~l~~lp~~r~~~~~~~~~~~iyv~GG~~--~--~~~~~~~v~~yd~~t--------~~W~~- 280 (457)
.++.++..+... .+|.++. +| +...-+...++++|+....+ . .......+...|..+ ..|+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~l~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 343 (711)
T 4hvt_A 267 YNYDNYILDTKYKNLKLQKIN-MP--SDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKIL 343 (711)
T ss_dssp SCEEEEEEECSSSSCEEEECC-SC--TTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEE
T ss_pred CceeEEEEcCCCCCCcceEee-cC--CcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEE
Confidence 346777777653 6788872 23 22111356689999976432 1 011345688888654 46887
Q ss_pred CCCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCceEEcC--CCCCCCCCCCCCCCCCCCCEEEEE---C
Q 012755 281 LPDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIE--NMYPSNVGTQSNPAMSSPPLVAVV---N 355 (457)
Q Consensus 281 ~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~~~~~~~~~~~r~~~~~~~~---~ 355 (457)
+++-. .+.-......++.+++..-.+ ....+.++|+.++.|.... .++. ......... +
T Consensus 344 ~~~~~-~~~l~~~~~~~~~l~~~~~~~----~~~~l~~~~~~~g~~~~~~~i~lp~-----------~~~~~~~~~~~~~ 407 (711)
T 4hvt_A 344 FTPTA-NEVFNFISTTKDRVFLATYDN----VVAKVVTFTLENEQWTKPVVLKLPY-----------QNAIFGMSSYEEE 407 (711)
T ss_dssp ECCCT-TEEEEEEEECSSCEEEEEEET----TEEEEEEECEETTEECCCEEECCCS-----------TTCEEEEECCTTC
T ss_pred ECCCC-CCeEEEEEEECCEEEEEEEEC----CEEEEEEEECCCCceEEEeccCCCC-----------CeEEEEEeecCcC
Confidence 33322 222233445567777654322 2346788998888874321 1221 111112211 2
Q ss_pred CEEEEEe-c--CCCeEEEEECCCCcEEEeccCC
Q 012755 356 NQLYSAD-Q--ATNVVKKYNKTNNSWTVVKRLP 385 (457)
Q Consensus 356 g~ly~~g-g--~~~~v~~Yd~~~~~W~~v~~~p 385 (457)
+.+++.. + ....++.||.. ++++.+...+
T Consensus 408 ~~~~~~~ss~~~P~~~~~~d~~-~~~~~l~~~~ 439 (711)
T 4hvt_A 408 EEALITIENSIVPPTIYLWVKT-HELKIIRKAL 439 (711)
T ss_dssp SCEEEEEECSSSCCEEEEECTT-SCEEEEECCS
T ss_pred CEEEEEEecCCCCCEEEEEeCC-CcEEEEecCC
Confidence 3444443 2 35689999988 7888776544
No 312
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=50.45 E-value=92 Score=29.86 Aligned_cols=70 Identities=7% Similarity=-0.013 Sum_probs=42.6
Q ss_pred CCEEEEEeccCCC---CCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEE-EECC--EEEEEecCCCeEEE
Q 012755 297 DGKFYIIGGMSSP---TDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVA-VVNN--QLYSADQATNVVKK 370 (457)
Q Consensus 297 ~g~iyv~GG~~~~---~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~g--~ly~~gg~~~~v~~ 370 (457)
++++|+.-+.... ....+.++++|++|.+-..--.... + ..+++ .-++ .||+..+..++|.+
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~-----------~-~~~lavs~D~~~~ly~tn~~~~~VsV 358 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH-----------E-IDSINVSQDEKPLLYALSTGDKTLYI 358 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-----------E-ECEEEECSSSSCEEEEEETTTTEEEE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC-----------C-cceEEECCCCCeEEEEEcCCCCeEEE
Confidence 5789997432211 1124689999999887543222111 1 11233 3355 47777777889999
Q ss_pred EECCCCcE
Q 012755 371 YNKTNNSW 378 (457)
Q Consensus 371 Yd~~~~~W 378 (457)
||..+++-
T Consensus 359 iD~~t~k~ 366 (386)
T 3sjl_D 359 HDAESGEE 366 (386)
T ss_dssp EETTTCCE
T ss_pred EECCCCcE
Confidence 99998764
No 313
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=49.97 E-value=1.3e+02 Score=26.15 Aligned_cols=57 Identities=11% Similarity=0.166 Sum_probs=35.3
Q ss_pred CCEEEEEecCCCeEEEEECCCCcEE-----Eec----cCCCccCCCCcceEEEEEeC--CEEEEEcCcCCCCCceEEEEE
Q 012755 355 NNQLYSADQATNVVKKYNKTNNSWT-----VVK----RLPVRANSFNGWGLAFKACG--NSLLVIGGHRELQGEIIVLHS 423 (457)
Q Consensus 355 ~g~ly~~gg~~~~v~~Yd~~~~~W~-----~v~----~~p~~~~~~~~~~~~~~~~~--g~lyv~GG~~~~~~~~~~v~~ 423 (457)
+|++|++-| +..|.||..+++=. .+. .+|... -+ +.... |.+|.|-|. ..+.
T Consensus 135 ~g~~YfFkG--~~ywr~d~~~~~v~~gyPr~i~~~w~g~p~~i------da-Af~~~~~g~~YfFkg~--------~y~~ 197 (218)
T 1gen_A 135 NKKTYIFAG--DKFWRYNEVKKKMDPGFPKLIADAWNAIPDNL------DA-VVDLQGGGHSYFFKGA--------YYLK 197 (218)
T ss_dssp TTEEEEEET--TEEEEEETTTTEECSSCCEEHHHHSSSCCSSC------SE-EEECTTTCEEEEEETT--------EEEE
T ss_pred CCeEEEEEC--CEEEEEECccccccCCCCcchhhccCCCCCCC------CE-EEEEcCCCcEEEEECC--------EEEE
Confidence 689999965 68999998776311 111 122211 13 33444 899999775 3777
Q ss_pred eeCCC
Q 012755 424 WDPTD 428 (457)
Q Consensus 424 y~~~~ 428 (457)
||...
T Consensus 198 ~~~~~ 202 (218)
T 1gen_A 198 LENQS 202 (218)
T ss_dssp EETTE
T ss_pred EECCc
Confidence 88765
No 314
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=49.80 E-value=2e+02 Score=28.28 Aligned_cols=70 Identities=10% Similarity=-0.058 Sum_probs=37.3
Q ss_pred CCEEEEEeeecCCCCccceEEEEeCCCC----cEEECCC---C----CCCCcceeEEEECCEEEEEeccCCCCCCCceEE
Q 012755 249 GEVAIVAGGTDKNGCILKSAELYNSELG----TWETLPD---M----NLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGE 317 (457)
Q Consensus 249 ~~~iyv~GG~~~~~~~~~~v~~yd~~t~----~W~~~~~---~----p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~ 317 (457)
..++||-|.. .+.++++|..++ +=.+.-. + ...+..+..+.-+| |||..-.+..+.....+.
T Consensus 95 r~~l~v~~l~------s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~ 167 (462)
T 2ece_A 95 RRFLIVPGLR------SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGIL 167 (462)
T ss_dssp SCEEEEEBTT------TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEE
T ss_pred CCEEEEccCC------CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEE
Confidence 4566666543 367999998877 2222110 1 11122222333356 888432222223457899
Q ss_pred EEECCCCc
Q 012755 318 EYNLETRT 325 (457)
Q Consensus 318 ~yd~~t~~ 325 (457)
.+|.+|.+
T Consensus 168 vlD~~T~~ 175 (462)
T 2ece_A 168 MLDHYSFE 175 (462)
T ss_dssp EECTTTCC
T ss_pred EEECCCCe
Confidence 99999875
No 315
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=48.71 E-value=1.7e+02 Score=27.31 Aligned_cols=68 Identities=10% Similarity=0.119 Sum_probs=37.4
Q ss_pred CCEEEEEecCCCeEEEEECCCC--cEEEeccCCCccCCCCcceEEEEEe-CC-EEEEEcCcCCCCCceEEEEEeeCCCC
Q 012755 355 NNQLYSADQATNVVKKYNKTNN--SWTVVKRLPVRANSFNGWGLAFKAC-GN-SLLVIGGHRELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 355 ~g~ly~~gg~~~~v~~Yd~~~~--~W~~v~~~p~~~~~~~~~~~~~~~~-~g-~lyv~GG~~~~~~~~~~v~~y~~~~~ 429 (457)
++++++.| ..+.+..||..+. .+..+...|.....+...-..+... ++ .+++.|+.++ .+.+||..+.
T Consensus 188 ~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg------~i~iwd~~~~ 259 (447)
T 3dw8_B 188 DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKG------TIRLCDMRAS 259 (447)
T ss_dssp TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTS------CEEEEETTTC
T ss_pred CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCC------eEEEEECcCC
Confidence 56777777 6789999999832 3443322221111111111222222 34 6788887764 4788998774
No 316
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=46.89 E-value=1.7e+02 Score=26.73 Aligned_cols=72 Identities=18% Similarity=0.143 Sum_probs=39.6
Q ss_pred CCEEEEEecC-----CCeEEEEECCCCcEEEeccCCCccCCC-Cc-ceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCC
Q 012755 355 NNQLYSADQA-----TNVVKKYNKTNNSWTVVKRLPVRANSF-NG-WGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPT 427 (457)
Q Consensus 355 ~g~ly~~gg~-----~~~v~~Yd~~~~~W~~v~~~p~~~~~~-~~-~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~ 427 (457)
+|+||++... ...|++||+++++-...-.++...... .. .++++..-++.+|+...... ....+.+||+.
T Consensus 77 ~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~---~~~~i~v~d~~ 153 (343)
T 2qe8_A 77 NGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD---DKAALIRVDLQ 153 (343)
T ss_dssp SSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG---GGCEEEEEETT
T ss_pred CCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC---CCCeEEEEECC
Confidence 5899998743 478999999988743322333111000 11 12222112578999753110 11268889987
Q ss_pred CC
Q 012755 428 DG 429 (457)
Q Consensus 428 ~~ 429 (457)
++
T Consensus 154 ~g 155 (343)
T 2qe8_A 154 TG 155 (343)
T ss_dssp TC
T ss_pred CC
Confidence 64
No 317
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=46.88 E-value=1.6e+02 Score=26.29 Aligned_cols=107 Identities=12% Similarity=0.096 Sum_probs=57.7
Q ss_pred CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-CCEEEEEecCCCeEEEEECCC
Q 012755 297 DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV-NNQLYSADQATNVVKKYNKTN 375 (457)
Q Consensus 297 ~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~g~ly~~gg~~~~v~~Yd~~~ 375 (457)
++.+|++... ...+..+|+....+..++-- . ..-.-+++.. ++.+++.....+.+..|+...
T Consensus 38 ~~~L~aV~d~------~~~I~~ld~~g~v~~~i~l~-g----------~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 38 SNTLFSTINK------PAAIVEMTTNGDLIRTIPLD-F----------VKDLETIEYIGDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp TTEEEEEEET------TEEEEEEETTCCEEEEEECS-S----------CSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred CCEEEEEECC------CCeEEEEeCCCCEEEEEecC-C----------CCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 4789987542 35689999997777777421 1 1222334444 556556654557888887665
Q ss_pred Cc--EEE-eccCCC--ccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEee
Q 012755 376 NS--WTV-VKRLPV--RANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWD 425 (457)
Q Consensus 376 ~~--W~~-v~~~p~--~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~ 425 (457)
+. |.. ...++. .......-|++...-+++||+.-.... ..++.|+
T Consensus 101 ~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p-----~~i~~~~ 150 (255)
T 3qqz_A 101 NSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNP-----IEVYKVN 150 (255)
T ss_dssp TCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSS-----EEEEEEE
T ss_pred CCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCC-----ceEEEEc
Confidence 44 521 112221 111111234443334668998765442 2456665
No 318
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=46.54 E-value=2.5e+02 Score=28.56 Aligned_cols=169 Identities=14% Similarity=0.065 Sum_probs=94.9
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEe--eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSS--LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLP 282 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~ 282 (457)
++.||+.- .....++++++.....+.+..-...+ -.++++ .++.||+.-. ....+++.++....-+.+.
T Consensus 360 ~~~ly~sD--~~~~~I~r~~~~g~~~~~v~~~~~~~-p~GlAvD~~~~~lY~tD~------~~~~I~v~~~~G~~~~~l~ 430 (619)
T 3s94_A 360 EGYIYWTD--DEVRAIRRSFIDGSGSQFVVTAQIAH-PDGIAVDWVARNLYWTDT------GTDRIEVTRLNGTMRKILI 430 (619)
T ss_dssp TTEEEEEE--TTTTEEEEEETTSCSCEEEECSSCSC-CCEEEEETTTTEEEEEET------TTTEEEEEETTSCSCEEEE
T ss_pred CCeEEEEe--CCCCeEEEEEcCCCccEEEEECCCCC-cCceEEecccCcEEEEeC------CCCcEEEEeCCCCeEEEEE
Confidence 68899864 23467899998876655542211111 123444 4889999732 2467889888765433332
Q ss_pred --CCCCCCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CC
Q 012755 283 --DMNLPRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NN 356 (457)
Q Consensus 283 --~~p~~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g 356 (457)
.+..|| +.++. +|.||+..-. ....+++.++....=..+..- . .....++++- ++
T Consensus 431 ~~~l~~P~---~iavdp~~G~ly~tD~g-----~~~~I~r~~~dG~~~~~l~~~-~----------l~~P~GlalD~~~~ 491 (619)
T 3s94_A 431 SEDLEEPR---AIVLDPMVGYMYWTDWG-----EIPKIERAALDGSDRVVLVNT-S----------LGWPNGLALDYDEG 491 (619)
T ss_dssp CTTCCSEE---EEEEETTTTEEEEEECS-----SSCEEEEEETTSCSCEEEECS-S----------CSCEEEEEEETTTT
T ss_pred ECCCCCee---eEEEEcCCCcEEEecCC-----CCCEEEEEccCCCccEEEEeC-C----------CCCCeeeEEcccCC
Confidence 222222 33443 5899997411 124577777654332222210 0 1111234443 68
Q ss_pred EEEEEecCCCeEEEEECCCCcEEEec--cCCCccCCCCcceEEEEEeCCEEEEEc
Q 012755 357 QLYSADQATNVVKKYNKTNNSWTVVK--RLPVRANSFNGWGLAFKACGNSLLVIG 409 (457)
Q Consensus 357 ~ly~~gg~~~~v~~Yd~~~~~W~~v~--~~p~~~~~~~~~~~~~~~~~g~lyv~G 409 (457)
+||+.....+.|+.+|++...=+.+. .++.+ . +++..++.||+.-
T Consensus 492 ~LY~aD~~~~~I~~~~~dG~~~~~~~~~~l~~P------~--glav~~~~ly~tD 538 (619)
T 3s94_A 492 KIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHI------F--GFTLLGDYVYWTD 538 (619)
T ss_dssp EEEEEETTTTEEEEEESSSCCCEEEEECCCCSS------C--CEEEETTEEEEEC
T ss_pred EEEEEECCCCEEEEEecCCCceEEEeccCCCCc------E--EEEEECCEEEEee
Confidence 99999988889999998765333332 22221 1 2446788999874
No 319
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=45.23 E-value=2e+02 Score=27.10 Aligned_cols=152 Identities=12% Similarity=0.099 Sum_probs=76.2
Q ss_pred CCEEEEEeeecCCCCccceEEEEeCCCCcE-EECCC--CCCCCcceeEEEECCEEEEEeccCC------CCCCCceEEEE
Q 012755 249 GEVAIVAGGTDKNGCILKSAELYNSELGTW-ETLPD--MNLPRKLCSGFFMDGKFYIIGGMSS------PTDPLTCGEEY 319 (457)
Q Consensus 249 ~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W-~~~~~--~p~~r~~~~~~~~~g~iyv~GG~~~------~~~~~~~~~~y 319 (457)
++.+++.|+.+ ..+.++|++|++- ..+.. .......+.+..-+|++.+.+..+. .+.....+..+
T Consensus 192 ~~~~LaSgS~D------~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklW 265 (356)
T 2w18_A 192 MQEALLGTTIM------NNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVI 265 (356)
T ss_dssp STTEEEEEETT------SEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEE
T ss_pred CCceEEEecCC------CcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEE
Confidence 34666666543 5788999999874 33321 1111111223345788776654311 11234567778
Q ss_pred ECCCCceEEcC--CCCCCCCCCCCCCCCCCCCE-EEEECCEEEEEecCCCeEEEEECCCCcEEEeccCCCccCCCCcceE
Q 012755 320 NLETRTWKRIE--NMYPSNVGTQSNPAMSSPPL-VAVVNNQLYSADQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGL 396 (457)
Q Consensus 320 d~~t~~W~~~~--~~~~~~~~~~~~~~~r~~~~-~~~~~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~ 396 (457)
|+.+++-..+- ..+. ...... ....++.+.+.|...+.|..||..+++-... +...... ....
T Consensus 266 d~~tgk~l~v~~~~~p~----------Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~t--L~gH~~~--vvs~ 331 (356)
T 2w18_A 266 NPKTTLSVGVMLYCLPP----------GQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTAL--LPPVSDQ--HWSF 331 (356)
T ss_dssp ETTTTEEEEEEEECCCT----------TCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEE--ECCC--C--CCCE
T ss_pred ECCCCEEEEEEEeeccC----------CCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEE--ecCCCCC--eEEE
Confidence 99877543221 1122 111111 1122244566666678999999999875432 2211110 0111
Q ss_pred EEEEeCCEEEEEcCcCCCCCceEEEEEeeC
Q 012755 397 AFKACGNSLLVIGGHRELQGEIIVLHSWDP 426 (457)
Q Consensus 397 ~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~ 426 (457)
....-+|++++.|+.++ .|.+||.
T Consensus 332 vafSPDG~~LaSGS~D~------TIklWd~ 355 (356)
T 2w18_A 332 VKWSGTDSHLLAGQKDG------NIFVYHY 355 (356)
T ss_dssp EEECSSSSEEEEECTTS------CEEEEEE
T ss_pred EEECCCCCEEEEEECCC------cEEEecC
Confidence 12234778888887764 4667764
No 320
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=44.72 E-value=2.7e+02 Score=28.51 Aligned_cols=150 Identities=14% Similarity=0.136 Sum_probs=71.3
Q ss_pred eEEeCCEEEEEceecCCcEEEEEECCCC-cE--EeC----CCCCCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEe
Q 012755 201 SLAVGTQLLVFGRELSGFAIWMYSLIAN-CW--SKC----PQMNLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYN 272 (457)
Q Consensus 201 ~~~~~~~lyv~GG~~~~~~v~~yd~~t~-~W--~~l----~~lp~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd 272 (457)
+....+.+|+|-|. .+|+++.... .. ..+ +.+|.. ...+... .++++|+|-| +..|+||
T Consensus 449 it~~rg~~yfFKg~----~yWr~~~~~~~~~~P~~Is~~wp~LP~~-IDAA~~~~~~~k~yFFkG--------~~yWry~ 515 (631)
T 1ck7_A 449 IAQIRGEIFFFKDR----FIWRTVTPRDKPMGPLLVATFWPELPEK-IDAVYEAPQEEKAVFFAG--------NEYWIYS 515 (631)
T ss_dssp EEECSSSEEEECSS----EEEEESCTTSCCEEEEEGGGTCTTSCSS-CSBCCEETTTTEEEEEET--------TEEEEEE
T ss_pred eEecCCcEEEEcCC----EEEEEcCCCCCCCCceeccccCCCCCcc-ceEEEEECCCCEEEEEec--------CEEEEEC
Confidence 45568889998763 5677765432 11 011 223321 1111111 2678999965 4678887
Q ss_pred CCCC--cE-EECCC--CCCCCcceeEEE---ECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCC
Q 012755 273 SELG--TW-ETLPD--MNLPRKLCSGFF---MDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPA 344 (457)
Q Consensus 273 ~~t~--~W-~~~~~--~p~~r~~~~~~~---~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~ 344 (457)
..+- -+ +.|.. +|..-....+|. .++++|.+-| +..++||..+++ +..-.+-+......-.
T Consensus 516 ~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG--------~~ywryd~~~~~---vd~gYPk~i~~~w~G~ 584 (631)
T 1ck7_A 516 ASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG--------DKFWRYNEVKKK---MDPGFPKLIADAWNAI 584 (631)
T ss_dssp TTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEET--------TEEEEEETTTTE---ECTTCCEETTTSCSSC
T ss_pred CCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEEC--------CEEEEEcCCccc---ccCCCCcchHhhcCCC
Confidence 5210 01 11111 121111122232 3689999965 357889976653 1111000000000000
Q ss_pred CCCCCEEEEEC--CEEEEEecCCCeEEEEECCCC
Q 012755 345 MSSPPLVAVVN--NQLYSADQATNVVKKYNKTNN 376 (457)
Q Consensus 345 ~r~~~~~~~~~--g~ly~~gg~~~~v~~Yd~~~~ 376 (457)
+....++...+ |++|++-| +..|+||..+.
T Consensus 585 p~~iDAAf~~~~~g~~YFFkG--~~Ywr~d~~~~ 616 (631)
T 1ck7_A 585 PDNLDAVVDLQGGGHSYFFKG--AYYLKLENQSL 616 (631)
T ss_dssp CTTCCEEECCTTSCBCEEEET--TEEECCBTTBT
T ss_pred CCCCcEeEEEcCCCeEEEEEC--CEEEEEeCccc
Confidence 11222333333 78999965 56788887654
No 321
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=43.63 E-value=2.1e+02 Score=26.76 Aligned_cols=162 Identities=14% Similarity=0.169 Sum_probs=77.5
Q ss_pred CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCC------CCcceeEEEE-----CCEEEEEecc--C----C-CC
Q 012755 249 GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNL------PRKLCSGFFM-----DGKFYIIGGM--S----S-PT 310 (457)
Q Consensus 249 ~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~------~r~~~~~~~~-----~g~iyv~GG~--~----~-~~ 310 (457)
++.+|+.-= ....+.++|+.++.=..+ ..+. +........+ +++|+++.-. . + ..
T Consensus 24 ~g~~~vs~l------~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~ 96 (334)
T 2p9w_A 24 RQVFYQSNL------YKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSS 96 (334)
T ss_dssp TTEEEEEET------TTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCS
T ss_pred CCEEEEEec------cCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccccc
Confidence 366666421 235788888886654343 2221 2223334444 5788886211 0 0 00
Q ss_pred CCCceEEEEECC---CC--ceEE-cCCCCCCCCCCCCCCCCCCCCEEEE-ECCEEEEEecCC-CeEEEEECCCC---cEE
Q 012755 311 DPLTCGEEYNLE---TR--TWKR-IENMYPSNVGTQSNPAMSSPPLVAV-VNNQLYSADQAT-NVVKKYNKTNN---SWT 379 (457)
Q Consensus 311 ~~~~~~~~yd~~---t~--~W~~-~~~~~~~~~~~~~~~~~r~~~~~~~-~~g~ly~~gg~~-~~v~~Yd~~~~---~W~ 379 (457)
.-...+.+||+. ++ .|.. ++....... ...+......-.+++ -+|.+|+.+... +.|+++|++.. .|-
T Consensus 97 ~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~-~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~ 175 (334)
T 2p9w_A 97 HGASSFHSFNLPLSENSKPVWSVNFEKVQDEFE-KKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFA 175 (334)
T ss_dssp SSCCEEEEEESSCCTTCCCSEEEESHHHHHHHH-HHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEE
T ss_pred CCCCEEEEEcCCcCCCCCEEEEecCcccccccc-ccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeee
Confidence 124678999988 44 4542 111110000 000000111112222 268999988777 89999999875 254
Q ss_pred EeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEEEeeCC
Q 012755 380 VVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLHSWDPT 427 (457)
Q Consensus 380 ~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~~y~~~ 427 (457)
.-. |.........|.+...-+..|++..+ .+ .++.+|..
T Consensus 176 ~~~--~~~~~~~G~nGIv~~pdg~~Liv~~~-~g------~L~~fD~~ 214 (334)
T 2p9w_A 176 WES--GNGGQRPGYSGITFDPHSNKLIAFGG-PR------ALTAFDVS 214 (334)
T ss_dssp ECC--CCSSSCCSCSEEEEETTTTEEEEESS-SS------SEEEEECS
T ss_pred ecC--CCcccccCcceEEEeCCCCEEEEEcC-CC------eEEEEcCC
Confidence 322 21111111223433223556777665 32 36667765
No 322
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=42.81 E-value=1.9e+02 Score=26.15 Aligned_cols=142 Identities=8% Similarity=0.021 Sum_probs=67.7
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEe-CCCCCCCccceeEEe-eCCEEEEEeeecCCCCccceEEEEeCCCCcEEECC
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSK-CPQMNLPRCLFGSSS-LGEVAIVAGGTDKNGCILKSAELYNSELGTWETLP 282 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~-l~~lp~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~ 282 (457)
++.+++.|+.+ ..+.+||..+++... +.. ....-.+++. -++..++.||.+ ..+.++|.....-....
T Consensus 87 ~~~~l~s~s~D--~~v~lwd~~~~~~~~~~~~--h~~~v~~v~~sp~~~~l~s~~~d------~~i~~wd~~~~~~~~~~ 156 (343)
T 2xzm_R 87 ENCFAISSSWD--KTLRLWDLRTGTTYKRFVG--HQSEVYSVAFSPDNRQILSAGAE------REIKLWNILGECKFSSA 156 (343)
T ss_dssp STTEEEEEETT--SEEEEEETTSSCEEEEEEC--CCSCEEEEEECSSTTEEEEEETT------SCEEEEESSSCEEEECC
T ss_pred CCCEEEEEcCC--CcEEEEECCCCcEEEEEcC--CCCcEEEEEECCCCCEEEEEcCC------CEEEEEeccCCceeeee
Confidence 45555666543 468889988775432 211 1111112222 255566666643 35777887644333322
Q ss_pred CCCCCCcceeEEEEC------------CEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCE
Q 012755 283 DMNLPRKLCSGFFMD------------GKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPL 350 (457)
Q Consensus 283 ~~p~~r~~~~~~~~~------------g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~ 350 (457)
...........+... +.+++.|+.+ ..+..||.....-..+. . ......
T Consensus 157 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~---~----------h~~~v~ 217 (343)
T 2xzm_R 157 EKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWD------GRLKVWNTNFQIRYTFK---A----------HESNVN 217 (343)
T ss_dssp TTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETT------SEEEEEETTTEEEEEEE---C----------CSSCEE
T ss_pred cccCCCceeeeeeeccccccccccCCCCCEEEEEcCC------CEEEEEcCCCceeEEEc---C----------ccccce
Confidence 211111111122221 1344555432 35677884322111111 1 111112
Q ss_pred EEEE--CCEEEEEecCCCeEEEEECCC
Q 012755 351 VAVV--NNQLYSADQATNVVKKYNKTN 375 (457)
Q Consensus 351 ~~~~--~g~ly~~gg~~~~v~~Yd~~~ 375 (457)
.+.+ +|+.++.|+..+.|..||..+
T Consensus 218 ~~~~s~~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 218 HLSISPNGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp EEEECTTSSEEEEEETTCEEEEEESSC
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 2223 677778888888999999843
No 323
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=42.80 E-value=3.4e+02 Score=28.99 Aligned_cols=103 Identities=5% Similarity=-0.069 Sum_probs=54.1
Q ss_pred CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCceEE
Q 012755 249 GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKR 328 (457)
Q Consensus 249 ~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~ 328 (457)
++.+.+.|+.+ ..+.+||..+..-.... +....-..++...|++.+.++. -..+.+||+.+.+-..
T Consensus 28 dg~~lAsgs~D------g~I~lw~~~~~~~~~~~--~~~~~V~~l~fspg~~L~S~s~------D~~v~lWd~~~~~~~~ 93 (902)
T 2oaj_A 28 TQNLLAIATVT------GEVHIYGQQQVEVVIKL--EDRSAIKEMRFVKGIYLVVINA------KDTVYVLSLYSQKVLT 93 (902)
T ss_dssp TTTEEEEEETT------SEEEEECSTTCEEEEEC--SSCCCEEEEEEETTTEEEEEET------TCEEEEEETTTCSEEE
T ss_pred CCCEEEEEeCC------CEEEEEeCCCcEEEEEc--CCCCCEEEEEEcCCCEEEEEEC------cCeEEEEECCCCcEEE
Confidence 44555555543 35667776655433221 1111122333344663344432 2468889988765322
Q ss_pred cCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCcE
Q 012755 329 IENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNSW 378 (457)
Q Consensus 329 ~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W 378 (457)
.-. . . .....+.+ ++..++.|...+.|..||.++..-
T Consensus 94 ~~~--~----------~-~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~ 132 (902)
T 2oaj_A 94 TVF--V----------P-GKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQL 132 (902)
T ss_dssp EEE--C----------S-SCEEEEECCTTCSEEEEEETTSCEEEEETTTTEE
T ss_pred EEc--C----------C-CCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 111 1 1 11122222 567777787888999999988764
No 324
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=42.64 E-value=2.2e+02 Score=29.05 Aligned_cols=156 Identities=8% Similarity=0.007 Sum_probs=86.6
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEe----eCCEEEEEeeecC----C-------CCccceEE
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSS----LGEVAIVAGGTDK----N-------GCILKSAE 269 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~----~~~~iyv~GG~~~----~-------~~~~~~v~ 269 (457)
|..+|| -......+.+.|+.+.+-.++-.+|.....|+++. -++++|+.+.+.. + ....+.+-
T Consensus 101 G~~lfV--nd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 101 GRFLFM--NDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEE--EETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCEEEE--EcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 456676 33456789999999988655435555555666664 3678888763311 1 13456788
Q ss_pred EEeCCCCc--EEEC-CCCCCCCcceeEEEE-CCEEEEEeccCCC-------------------------------CCCCc
Q 012755 270 LYNSELGT--WETL-PDMNLPRKLCSGFFM-DGKFYIIGGMSSP-------------------------------TDPLT 314 (457)
Q Consensus 270 ~yd~~t~~--W~~~-~~~p~~r~~~~~~~~-~g~iyv~GG~~~~-------------------------------~~~~~ 314 (457)
+.|..|.+ |+-. +.-| ....+.. ++.+|+..-.+.. ....+
T Consensus 179 vID~~t~~v~~qI~Vgg~p----d~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSGNL----DNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp EEETTTTEEEEEEEESSCC----CCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred EEECCCCeEEEEEEeCCCc----cceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 89999876 6643 1211 1111222 2334443321110 01124
Q ss_pred eEEEEECCCCceEE-cCCCCCCCCCCCCCCCCCCCCEEEEE-CC-EEEEEecCCCeEEEEECCCC
Q 012755 315 CGEEYNLETRTWKR-IENMYPSNVGTQSNPAMSSPPLVAVV-NN-QLYSADQATNVVKKYNKTNN 376 (457)
Q Consensus 315 ~~~~yd~~t~~W~~-~~~~~~~~~~~~~~~~~r~~~~~~~~-~g-~ly~~gg~~~~v~~Yd~~~~ 376 (457)
.+-+.|+++.+.+. +..++. +...+++.+- || .+|+.+...+.|.+||.++.
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipv----------g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPI----------ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEE----------ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGH
T ss_pred cEEEEeCcccCCceeEEEEec----------CCCceEEEEcCCCCEEEEeCCCCCeEEEEECccc
Confidence 57778888733222 222222 2334445443 55 57777778899999999864
No 325
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=42.33 E-value=2e+02 Score=26.29 Aligned_cols=64 Identities=5% Similarity=-0.106 Sum_probs=37.0
Q ss_pred CCEEEEEeccCCCCCCCce-EEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEEC
Q 012755 297 DGKFYIIGGMSSPTDPLTC-GEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNK 373 (457)
Q Consensus 297 ~g~iyv~GG~~~~~~~~~~-~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~ 373 (457)
+|++.+.|+.+ .. +..||..+.+-...-.... .......+.. ++++++.++..+.+..||.
T Consensus 206 ~g~~l~s~s~d------~~~v~iwd~~~~~~~~~~~~g~----------h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 206 KSDMVATCSQD------GTIIRVFKTEDGVLVREFRRGL----------DRADVVDMKWSTDGSKLAVVSDKWTLHVFEI 269 (355)
T ss_dssp TSSEEEEEETT------CSEEEEEETTTCCEEEEEECTT----------CCSCEEEEEECTTSCEEEEEETTCEEEEEES
T ss_pred CCCEEEEEeCC------CCEEEEEECCCCcEEEEEEcCC----------CCCcEEEEEECCCCCEEEEEECCCEEEEEEc
Confidence 66666666543 34 7889998765332111000 0111112222 6788888888889999998
Q ss_pred CCC
Q 012755 374 TNN 376 (457)
Q Consensus 374 ~~~ 376 (457)
++.
T Consensus 270 ~~~ 272 (355)
T 3vu4_A 270 FND 272 (355)
T ss_dssp SCC
T ss_pred cCC
Confidence 654
No 326
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=42.17 E-value=2.9e+02 Score=28.06 Aligned_cols=146 Identities=11% Similarity=-0.035 Sum_probs=83.3
Q ss_pred eCCEEEEEceecCCcEEEEEECCCCcEEeCC--CCCCCccceeEEee--CCEEEEEeeecCCCCccceEEEEeCCCCcEE
Q 012755 204 VGTQLLVFGRELSGFAIWMYSLIANCWSKCP--QMNLPRCLFGSSSL--GEVAIVAGGTDKNGCILKSAELYNSELGTWE 279 (457)
Q Consensus 204 ~~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~--~lp~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~ 279 (457)
.++.||+.- .....+.+.+.....-+.+. .+..|| ++++. ++.||+.--. . ...+++.+.....=+
T Consensus 402 ~~~~lY~tD--~~~~~I~v~~~~G~~~~~l~~~~l~~P~---~iavdp~~G~ly~tD~g----~-~~~I~r~~~dG~~~~ 471 (619)
T 3s94_A 402 VARNLYWTD--TGTDRIEVTRLNGTMRKILISEDLEEPR---AIVLDPMVGYMYWTDWG----E-IPKIERAALDGSDRV 471 (619)
T ss_dssp TTTEEEEEE--TTTTEEEEEETTSCSCEEEECTTCCSEE---EEEEETTTTEEEEEECS----S-SCEEEEEETTSCSCE
T ss_pred ccCcEEEEe--CCCCcEEEEeCCCCeEEEEEECCCCCee---eEEEEcCCCcEEEecCC----C-CCEEEEEccCCCccE
Confidence 378899863 33457888887755433332 333443 23333 5899987410 1 246777776433222
Q ss_pred ECCCCCCCCcce-eEEEE--CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEECC
Q 012755 280 TLPDMNLPRKLC-SGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVNN 356 (457)
Q Consensus 280 ~~~~~p~~r~~~-~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g 356 (457)
.+.. ...... +.++- +++||+.-. ....++++|+....=+.+... . .....++++.++
T Consensus 472 ~l~~--~~l~~P~GlalD~~~~~LY~aD~------~~~~I~~~~~dG~~~~~~~~~-~----------l~~P~glav~~~ 532 (619)
T 3s94_A 472 VLVN--TSLGWPNGLALDYDEGKIYWGDA------KTDKIEVMNTDGTGRRVLVED-K----------IPHIFGFTLLGD 532 (619)
T ss_dssp EEEC--SSCSCEEEEEEETTTTEEEEEET------TTTEEEEEESSSCCCEEEEEC-C----------CCSSCCEEEETT
T ss_pred EEEe--CCCCCCeeeEEcccCCEEEEEEC------CCCEEEEEecCCCceEEEecc-C----------CCCcEEEEEECC
Confidence 2211 111122 23333 689999842 245788898865433333110 1 112345788899
Q ss_pred EEEEEecCCCeEEEEECCCCcE
Q 012755 357 QLYSADQATNVVKKYNKTNNSW 378 (457)
Q Consensus 357 ~ly~~gg~~~~v~~Yd~~~~~W 378 (457)
.||+.....+.|++.|..++.=
T Consensus 533 ~ly~tD~~~~~I~~~~k~~g~~ 554 (619)
T 3s94_A 533 YVYWTDWQRRSIERVHKRSAER 554 (619)
T ss_dssp EEEEECTTSSCEEEEESSSCCE
T ss_pred EEEEeecCCCeEEEEEcCCCce
Confidence 9999988788999999887643
No 327
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=41.31 E-value=2.3e+02 Score=28.09 Aligned_cols=107 Identities=9% Similarity=0.017 Sum_probs=62.9
Q ss_pred CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCCCCc-ceeEEEE---------CC-EEEEEeccCCCCCCCceEE
Q 012755 249 GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNLPRK-LCSGFFM---------DG-KFYIIGGMSSPTDPLTCGE 317 (457)
Q Consensus 249 ~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~-~~~~~~~---------~g-~iyv~GG~~~~~~~~~~~~ 317 (457)
++.||++-.. ...+.++|++++.-+.+........ ......+ +| .||+..-..+.......+.
T Consensus 151 ~~~Lyv~~~~------~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~ 224 (496)
T 3kya_A 151 KDHLYICYDG------HKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVY 224 (496)
T ss_dssp EEEEEEEEET------EEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEE
T ss_pred CCEEEEEECC------CCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEE
Confidence 4679988542 2468999999999888754433111 2222333 44 5888743221101234577
Q ss_pred EEECCC-CceE------EcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECC
Q 012755 318 EYNLET-RTWK------RIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKT 374 (457)
Q Consensus 318 ~yd~~t-~~W~------~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~ 374 (457)
.++... +.|. .++. ....+++++. ++.||+.....+.|++||++
T Consensus 225 ~i~r~~~G~~~~~~~~~~v~~-------------~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 225 IIKRNADGTFDDRSDIQLIAA-------------YKQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp EEECCTTSCCSTTSCEEEEEE-------------ESCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred EEecCCCCceeecccceeecc-------------CCCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 777554 3553 3321 1223445544 57899998777889999997
No 328
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=40.09 E-value=2.2e+02 Score=26.08 Aligned_cols=160 Identities=6% Similarity=-0.070 Sum_probs=72.1
Q ss_pred CC-EEEEEceecCCcEEEEEECC-CCcEEeCCCC--CC-CccceeEEe-eCC-EEEEEeeecCCCCccceEEE--EeCCC
Q 012755 205 GT-QLLVFGRELSGFAIWMYSLI-ANCWSKCPQM--NL-PRCLFGSSS-LGE-VAIVAGGTDKNGCILKSAEL--YNSEL 275 (457)
Q Consensus 205 ~~-~lyv~GG~~~~~~v~~yd~~-t~~W~~l~~l--p~-~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~v~~--yd~~t 275 (457)
++ .+|+.. ...+.+.+||.. +++...+..+ +. ...-..++. -++ .+|+.+.. ...+.+ +|..+
T Consensus 155 dG~~l~~~~--~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~------~~~v~v~~~~~~~ 226 (365)
T 1jof_A 155 TETYLYSAD--LTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEA------GNRICEYVIDPAT 226 (365)
T ss_dssp TSSEEEEEE--TTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETT------TTEEEEEEECTTT
T ss_pred CCCEEEEEc--CCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECC------CCeEEEEEEeCCC
Confidence 44 566543 224578999987 7766443221 11 111111222 234 67776421 134444 45656
Q ss_pred CcEE----ECCCCCCCC---c-------ceeEEE-E--CC-EEEEEeccCCCCCCCceEEEEECC-CCceEEcCC-CCCC
Q 012755 276 GTWE----TLPDMNLPR---K-------LCSGFF-M--DG-KFYIIGGMSSPTDPLTCGEEYNLE-TRTWKRIEN-MYPS 335 (457)
Q Consensus 276 ~~W~----~~~~~p~~r---~-------~~~~~~-~--~g-~iyv~GG~~~~~~~~~~~~~yd~~-t~~W~~~~~-~~~~ 335 (457)
++.. .+..+|... . ....+. + +| .||+.... ........+.+|+.. +++...+.. .+..
T Consensus 227 g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~-~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~ 305 (365)
T 1jof_A 227 HMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRA-NKFELQGYIAGFKLRDCGSIEKQLFLSPTP 305 (365)
T ss_dssp CCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE-SSTTSCCEEEEEEECTTSCEEEEEEEEECS
T ss_pred CcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCC-CCCCCCCeEEEEEECCCCCEEEeeeeeecC
Confidence 6643 343344321 1 122233 3 55 46664321 111122368888875 566554211 1100
Q ss_pred CCCCCCCCCCCCCCEEEEE----CCEEEEEecCCCeEEEEECCCCcEEEe
Q 012755 336 NVGTQSNPAMSSPPLVAVV----NNQLYSADQATNVVKKYNKTNNSWTVV 381 (457)
Q Consensus 336 ~~~~~~~~~~r~~~~~~~~----~g~ly~~gg~~~~v~~Yd~~~~~W~~v 381 (457)
+ ..++. .+..- +..||+.+...+.|.+|+.+.+.=+.+
T Consensus 306 ----~--~~~~~--~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~l~~~ 347 (365)
T 1jof_A 306 ----T--SGGHS--NAVSPCPWSDEWMAITDDQEGWLEIYRWKDEFLHRV 347 (365)
T ss_dssp ----S--CCTTC--CCEEECTTCTTEEEEECSSSCEEEEEEEETTEEEEE
T ss_pred ----C--CCccc--ceecCCCcCCCEEEEEEcCCCeEEEEEEchhhCcee
Confidence 0 00111 12223 345666655557888887766543333
No 329
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=36.74 E-value=2.7e+02 Score=26.11 Aligned_cols=142 Identities=12% Similarity=0.036 Sum_probs=76.2
Q ss_pred CcEEEEEECCC--CcEEeCCCC---C--CCccceeEEee---CC--EEEEEeeecCCCCccceEEEEeCCCCcEEECCC-
Q 012755 217 GFAIWMYSLIA--NCWSKCPQM---N--LPRCLFGSSSL---GE--VAIVAGGTDKNGCILKSAELYNSELGTWETLPD- 283 (457)
Q Consensus 217 ~~~v~~yd~~t--~~W~~l~~l---p--~~r~~~~~~~~---~~--~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~- 283 (457)
...+++||+.+ .+-+++.-. + ..-.-|++... ++ +|||+--... ...-.++.+|+.++....+..
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~--~s~ielf~~d~~~~~~~~~~~~ 159 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGS--SSTVEVFKFQEEEKSLLHLKTI 159 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTT--CCEEEEEEEETTTTEEEEEEEE
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCC--CCeEEEEEEECCCCEEEEEecc
Confidence 34688999873 344444211 1 12244666553 23 5777743221 123345556776666554432
Q ss_pred --CCCCCcceeEEEECCEEEEEecc--CC---------CCCCCceEEEEECCCCceEEcC-CCCCCCCCCCCCCCCCCCC
Q 012755 284 --MNLPRKLCSGFFMDGKFYIIGGM--SS---------PTDPLTCGEEYNLETRTWKRIE-NMYPSNVGTQSNPAMSSPP 349 (457)
Q Consensus 284 --~p~~r~~~~~~~~~g~iyv~GG~--~~---------~~~~~~~~~~yd~~t~~W~~~~-~~~~~~~~~~~~~~~r~~~ 349 (457)
.+..+.+-..+.-+|.+|+-+.. +. .......++.||+. +.+.+. .+.. .-
T Consensus 160 ~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l~~-------------pN 224 (355)
T 3sre_A 160 RHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGFDF-------------AN 224 (355)
T ss_dssp CCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEESS-------------EE
T ss_pred ccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeecCCcc-------------cC
Confidence 22233344455668999986431 11 01124578889884 444433 2211 12
Q ss_pred EEEEE-CC-EEEEEecCCCeEEEEECCC
Q 012755 350 LVAVV-NN-QLYSADQATNVVKKYNKTN 375 (457)
Q Consensus 350 ~~~~~-~g-~ly~~gg~~~~v~~Yd~~~ 375 (457)
+++.- ++ .||+.....+.|++||...
T Consensus 225 Gia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 225 GINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp EEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 33333 44 7999987778999999864
No 330
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=36.58 E-value=2.5e+02 Score=25.60 Aligned_cols=124 Identities=10% Similarity=0.042 Sum_probs=65.5
Q ss_pred CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCC-C---CCcceeEEEE--CCEEEEEeccCCCCCCCceEEEEECC
Q 012755 249 GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMN-L---PRKLCSGFFM--DGKFYIIGGMSSPTDPLTCGEEYNLE 322 (457)
Q Consensus 249 ~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p-~---~r~~~~~~~~--~g~iyv~GG~~~~~~~~~~~~~yd~~ 322 (457)
++++||.......+. ..++.+| +++-...|... . .......+.+ +|+||++.-... ......+.+||+.
T Consensus 27 ~g~~~v~~~~~~~~~--~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~-~~~~~~i~~~d~~ 101 (343)
T 2qe8_A 27 DGRLFLSLHQFYQPE--MQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQ-SKSVPKLVAWDTL 101 (343)
T ss_dssp TSCEEEEECGGGCCS--CSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHH-HTSCCEEEEEETT
T ss_pred CCCEEEEeCCCCCCc--eEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCC-cCCCCeEEEEECC
Confidence 678988753211111 4677777 45544333211 1 1122223333 589999852110 0013578999999
Q ss_pred CCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEec---CCCeEEEEECCCC-cEEEec
Q 012755 323 TRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQ---ATNVVKKYNKTNN-SWTVVK 382 (457)
Q Consensus 323 t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg---~~~~v~~Yd~~~~-~W~~v~ 382 (457)
+++-...-.++.. . .........+++- ++.+|+... ..+.+.+||++++ .|+.+.
T Consensus 102 tg~~~~~~~~~~~----~-~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~ 162 (343)
T 2qe8_A 102 NNQLSRVIYLPPP----I-TLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQ 162 (343)
T ss_dssp TTEEEEEEECCTT----T-SCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECT
T ss_pred CCeEEEEEECChh----h-cccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEec
Confidence 8874322122110 0 0001222445554 578999875 5678999999865 576653
No 331
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=35.26 E-value=2.2e+02 Score=26.43 Aligned_cols=73 Identities=11% Similarity=0.091 Sum_probs=39.3
Q ss_pred CCEEEEEecC-------CCeEEEEECCCC--c---EEEe-ccCCCc-cCCCCcceEEEEEeCCEEEEEcCcCCC------
Q 012755 355 NNQLYSADQA-------TNVVKKYNKTNN--S---WTVV-KRLPVR-ANSFNGWGLAFKACGNSLLVIGGHREL------ 414 (457)
Q Consensus 355 ~g~ly~~gg~-------~~~v~~Yd~~~~--~---W~~v-~~~p~~-~~~~~~~~~~~~~~~g~lyv~GG~~~~------ 414 (457)
++.||+.... .+.|.+|+.+.+ . .+.+ ..+|.. ...|...+++ ..-+|.||+.-|..+.
T Consensus 80 ~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~-~~pdG~Lyv~~Gd~~~~~~~q~ 158 (353)
T 2g8s_A 80 SRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLV-FDGKGYLFIALGENNQRPTAQD 158 (353)
T ss_dssp HCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEE-ECSSSEEEEEECCTTCGGGGGC
T ss_pred CCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEE-ECCCCcEEEEECCCCCCCccCC
Confidence 6899998432 346888877543 2 3332 344532 1222222332 2347899999765432
Q ss_pred -CCceEEEEEeeCCC
Q 012755 415 -QGEIIVLHSWDPTD 428 (457)
Q Consensus 415 -~~~~~~v~~y~~~~ 428 (457)
......|+.++++.
T Consensus 159 ~~~~~g~I~ri~~dG 173 (353)
T 2g8s_A 159 LDKLQGKLVRLTDQG 173 (353)
T ss_dssp TTSCTTEEEEEETTS
T ss_pred CCCCCeEEEEECCCC
Confidence 11123678888864
No 332
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=34.62 E-value=4.1e+02 Score=27.56 Aligned_cols=147 Identities=10% Similarity=0.019 Sum_probs=75.5
Q ss_pred CccEEEEeCCCC--cE--EeCCCCCCCccccCCCeeeE-EeCCEEEEEceec--CCcEEEEEECCC-CcEEe-C-CCCCC
Q 012755 169 LMPWEAFDPLRQ--RW--MRLPRMQCDECFTSADKESL-AVGTQLLVFGREL--SGFAIWMYSLIA-NCWSK-C-PQMNL 238 (457)
Q Consensus 169 ~~~~~~ydp~~~--~W--~~l~~~p~~~~~~~~~~~~~-~~~~~lyv~GG~~--~~~~v~~yd~~t-~~W~~-l-~~lp~ 238 (457)
...++.+|..+. .+ ..+.+-.. . ...... ..++.||+..... ....++.+|..+ ..|+. + +. ..
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~~~~----~-~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~-~~ 367 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRPREK----G-VRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDH-SE 367 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSCCCT----T-CCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECC-CS
T ss_pred CceEEEEECCCCCCCceeEEeecCCC----C-ceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECC-CC
Confidence 456777887664 34 44432111 0 001111 2377888876543 346899999876 67876 4 32 11
Q ss_pred CccceeEEeeCCEEEEEeeecCCCCccceEEEEeC-------CCCc-EEECCCCCCCCcceeEE-----EECC-EEEEE-
Q 012755 239 PRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNS-------ELGT-WETLPDMNLPRKLCSGF-----FMDG-KFYII- 303 (457)
Q Consensus 239 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~-------~t~~-W~~~~~~p~~r~~~~~~-----~~~g-~iyv~- 303 (457)
..........++.|++....++ ...++++|+ .++. -+.++ ++......... ..++ .+++.
T Consensus 368 ~~~l~~~~~~~~~lv~~~~~~g----~~~l~~~dl~~~~~~~~~g~~~~~l~-l~~~~~~~~~~~~~~~~~~~~~l~~~~ 442 (751)
T 2xe4_A 368 DVFMESIAVRSNYLVVAGRRAG----LTRIWTMMADSQDGVFKAGTGLREVV-MEEPIFTVHLVESQMLEYEEPTFRMEY 442 (751)
T ss_dssp SEEEEEEEECSSEEEEEEEETT----EEEEEEEECCTTTSCCCTTTCCEECC-CCCSSCEEEECGGGCCCTTCSCEEEEE
T ss_pred CcEEEEEEEECCEEEEEEEeCC----EEEEEEEecccccccccCCccceEEC-CCCceeEEEeccCcccCCCCCEEEEEE
Confidence 1122233445777777765433 467888996 4444 44442 22221111110 1122 33332
Q ss_pred eccCCCCCCCceEEEEECCCCceEEcC
Q 012755 304 GGMSSPTDPLTCGEEYNLETRTWKRIE 330 (457)
Q Consensus 304 GG~~~~~~~~~~~~~yd~~t~~W~~~~ 330 (457)
.+. .....++.||+.+++.+.+.
T Consensus 443 ss~----~~P~~~~~~d~~~~~~~~l~ 465 (751)
T 2xe4_A 443 SSL----ATPNTWFDVSPQDHSRTAVK 465 (751)
T ss_dssp EET----TEEEEEEEECTTTCCEEEEE
T ss_pred eCC----CCCCEEEEEECCCCcEEEEe
Confidence 221 12456788999888877665
No 333
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=34.58 E-value=3.5e+02 Score=28.16 Aligned_cols=145 Identities=9% Similarity=-0.017 Sum_probs=77.9
Q ss_pred ccEEEEeCCC--CcEEeCCCCCCCccccCCCeeeEEeCCEEEEEceec--------CCcEEEEEECCC--------CcEE
Q 012755 170 MPWEAFDPLR--QRWMRLPRMQCDECFTSADKESLAVGTQLLVFGREL--------SGFAIWMYSLIA--------NCWS 231 (457)
Q Consensus 170 ~~~~~ydp~~--~~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~--------~~~~v~~yd~~t--------~~W~ 231 (457)
+.++..|... ..|.++. +|... . .+...++.+|+..... ....+...|..+ ..|+
T Consensus 269 ~~~~~~~~~~~~~~~~~l~-~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 341 (711)
T 4hvt_A 269 YDNYILDTKYKNLKLQKIN-MPSDA--T----LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLK 341 (711)
T ss_dssp EEEEEEECSSSSCEEEECC-SCTTC--E----EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCE
T ss_pred eeEEEEcCCCCCCcceEee-cCCcc--e----EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccce
Confidence 4455555442 4576662 33211 0 1245688998865322 345788888654 4688
Q ss_pred e-CCCCCCCccceeEEeeCCEEEEEeeecCCCCccceEEEEeCCCCcEEEC--CCCCCCCcceeEEEE---CCEEEEE-e
Q 012755 232 K-CPQMNLPRCLFGSSSLGEVAIVAGGTDKNGCILKSAELYNSELGTWETL--PDMNLPRKLCSGFFM---DGKFYII-G 304 (457)
Q Consensus 232 ~-l~~lp~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~--~~~p~~r~~~~~~~~---~g~iyv~-G 304 (457)
. +++- ..+....+...++.+++..-.++ ...+.++|+.++.|... .++|.. ........ ++.+++. .
T Consensus 342 ~~~~~~-~~~~l~~~~~~~~~l~~~~~~~~----~~~l~~~~~~~g~~~~~~~i~lp~~-~~~~~~~~~~~~~~~~~~~s 415 (711)
T 4hvt_A 342 ILFTPT-ANEVFNFISTTKDRVFLATYDNV----VAKVVTFTLENEQWTKPVVLKLPYQ-NAIFGMSSYEEEEEALITIE 415 (711)
T ss_dssp EEECCC-TTEEEEEEEECSSCEEEEEEETT----EEEEEEECEETTEECCCEEECCCST-TCEEEEECCTTCSCEEEEEE
T ss_pred EEECCC-CCCeEEEEEEECCEEEEEEEECC----EEEEEEEECCCCceEEEeccCCCCC-eEEEEEeecCcCCEEEEEEe
Confidence 7 4332 22333344555777777654332 45788999988888432 223322 11222221 2334433 3
Q ss_pred ccCCCCCCCceEEEEECCCCceEEcCCC
Q 012755 305 GMSSPTDPLTCGEEYNLETRTWKRIENM 332 (457)
Q Consensus 305 G~~~~~~~~~~~~~yd~~t~~W~~~~~~ 332 (457)
+.. ....++.||.. ++++.+...
T Consensus 416 s~~----~P~~~~~~d~~-~~~~~l~~~ 438 (711)
T 4hvt_A 416 NSI----VPPTIYLWVKT-HELKIIRKA 438 (711)
T ss_dssp CSS----SCCEEEEECTT-SCEEEEECC
T ss_pred cCC----CCCEEEEEeCC-CcEEEEecC
Confidence 222 34578889987 777776544
No 334
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=33.05 E-value=4.5e+02 Score=27.55 Aligned_cols=214 Identities=13% Similarity=0.124 Sum_probs=105.8
Q ss_pred ccEEEEEecCccEEEEeCCCCcEEeCCCCCCCccccCCCeeeEEe----CCEEEEEceecC---CcEEEEEECCCCcEEe
Q 012755 160 EHWVYLACILMPWEAFDPLRQRWMRLPRMQCDECFTSADKESLAV----GTQLLVFGRELS---GFAIWMYSLIANCWSK 232 (457)
Q Consensus 160 ~~~l~~~~~~~~~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~----~~~lyv~GG~~~---~~~v~~yd~~t~~W~~ 232 (457)
...+|+......++.-+-.-.+|..+...+.+..........+++ .+.+|+..|... ...+++-+-.-.+|++
T Consensus 27 ~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~ 106 (789)
T 1sqj_A 27 KDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTI 106 (789)
T ss_dssp TTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCEEEEESSTTSEEEE
T ss_pred CCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccEEEEECCCCCccee
Confidence 455676655556777777788999976533211000111112222 246777655321 1345555555678988
Q ss_pred CCC-CC-----CCc-cceeEEee---CCEEEEEeeecCCCCccceEEEEeCCCCcEEECCCCCC---CCcceeEEEE---
Q 012755 233 CPQ-MN-----LPR-CLFGSSSL---GEVAIVAGGTDKNGCILKSAELYNSELGTWETLPDMNL---PRKLCSGFFM--- 296 (457)
Q Consensus 233 l~~-lp-----~~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~---~r~~~~~~~~--- 296 (457)
+.. ++ ..| ..+.+++. .+.+|+ |... ..+++=+-.-.+|+.+..++. .-.....+.+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~-g~~~------~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~ 179 (789)
T 1sqj_A 107 YESPFPMGANDMGRNNGERLAVNPFNSNEVWM-GTRT------EGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPE 179 (789)
T ss_dssp EECSSCCCTTSTTTTSCCCEEEETTEEEEEEE-ECSS------SCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTT
T ss_pred ccCCcccCccCCCccceeEEEEcCCCCCEEEE-Eecc------CCEEEECCCCcccCCCccCccccCCCCCeEEEEECCC
Confidence 732 11 122 12233333 345666 3311 234333333467999876442 1122222333
Q ss_pred -CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCC-----CCC-CCCCCCCCCEEEEE--CCEEEEEe-----
Q 012755 297 -DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNV-----GTQ-SNPAMSSPPLVAVV--NNQLYSAD----- 362 (457)
Q Consensus 297 -~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~-----~~~-~~~~~r~~~~~~~~--~g~ly~~g----- 362 (457)
.+.||+..... ..+++=.-.-.+|+.+..++.... +.. ..+.....+.++.. ++.||+..
T Consensus 180 ~~~~~~~~~~~~------~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~ 253 (789)
T 1sqj_A 180 RNGTIYASATAP------QGMYVTHDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPG 253 (789)
T ss_dssp STTCEEEEESST------TCEEEESSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSCS
T ss_pred CCCEEEEEEcCC------CeEEEEcCCCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEecCCC
Confidence 24677754321 122221222458999874432000 000 00011122333332 78999883
Q ss_pred ---cCCCeEEEEECCCCcEEEeccCCC
Q 012755 363 ---QATNVVKKYNKTNNSWTVVKRLPV 386 (457)
Q Consensus 363 ---g~~~~v~~Yd~~~~~W~~v~~~p~ 386 (457)
+....|++.+-...+|+.+...|.
T Consensus 254 p~~g~~g~l~~S~DgG~tW~~~~~~~~ 280 (789)
T 1sqj_A 254 PWGVTFGEVWRQNRTSGAWDDITPRVG 280 (789)
T ss_dssp SSCCCCCCEEEEETTTCCEEECCCCTT
T ss_pred CCCCCCceEEEEeCCCCceEECcCCCC
Confidence 356789999999999999976543
No 335
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=31.14 E-value=3.1e+02 Score=25.05 Aligned_cols=23 Identities=13% Similarity=-0.010 Sum_probs=14.8
Q ss_pred cEEEEEe-cCccEEEEeCC-CCcEE
Q 012755 161 HWVYLAC-ILMPWEAFDPL-RQRWM 183 (457)
Q Consensus 161 ~~l~~~~-~~~~~~~ydp~-~~~W~ 183 (457)
..+|+.. +.+.+..||.. +.+..
T Consensus 157 ~~l~~~~~~~~~v~~~~~~~~g~~~ 181 (365)
T 1jof_A 157 TYLYSADLTANKLWTHRKLASGEVE 181 (365)
T ss_dssp SEEEEEETTTTEEEEEEECTTSCEE
T ss_pred CEEEEEcCCCCEEEEEEECCCCCEE
Confidence 4566654 35678889887 56554
No 336
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=29.58 E-value=3e+02 Score=25.37 Aligned_cols=116 Identities=15% Similarity=0.066 Sum_probs=58.5
Q ss_pred CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEEC-----CEEEEEecCC-----C
Q 012755 297 DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVVN-----NQLYSADQAT-----N 366 (457)
Q Consensus 297 ~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-----g~ly~~gg~~-----~ 366 (457)
+|+|||..- ...+.+++ +.+.+.+...+.. ........+++... +.||+..... +
T Consensus 41 dG~l~V~e~-------~g~I~~i~--~g~~~~~~~~~v~------~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 41 DGGMLIAER-------PGRIRLFR--EGRLSTYAELSVY------HRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp TSCEEEEET-------TTEEEEEE--TTEEEEEEECCCC------CSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCeEEEEeC-------CCeEEEEE--CCCccEeecceEe------ecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 567777631 14567776 3444443322210 00012234455543 5899986432 6
Q ss_pred eEEEEECCCCcEE---Ee-ccCCC-ccCCCCcceEEEEEeCCEEEEEcCcCCCC-------CceEEEEEeeCCC
Q 012755 367 VVKKYNKTNNSWT---VV-KRLPV-RANSFNGWGLAFKACGNSLLVIGGHRELQ-------GEIIVLHSWDPTD 428 (457)
Q Consensus 367 ~v~~Yd~~~~~W~---~v-~~~p~-~~~~~~~~~~~~~~~~g~lyv~GG~~~~~-------~~~~~v~~y~~~~ 428 (457)
.|.+|+...+... .+ ..+|. ....+...+++ ..-+|.||+.-|..+.. .....|+.++++.
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~-~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG 178 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIA-FGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG 178 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEE-ECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEE-ECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC
Confidence 7999998766442 22 23442 11122222232 23478999986643221 1123688888864
No 337
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=29.37 E-value=3.7e+02 Score=25.49 Aligned_cols=63 Identities=11% Similarity=0.105 Sum_probs=37.3
Q ss_pred CCEEEEEec---------CCCeEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCC--EEEEEcCcCCCCCceEEEEE
Q 012755 355 NNQLYSADQ---------ATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGN--SLLVIGGHRELQGEIIVLHS 423 (457)
Q Consensus 355 ~g~ly~~gg---------~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g--~lyv~GG~~~~~~~~~~v~~ 423 (457)
++++|+.-. ..+.|+++|.++.+-. ..++.... -+++++ .-++ .||+.-+.. .++.+
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~--~~i~vg~~---~~~lav-s~D~~~~ly~tn~~~------~~VsV 358 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERL--AKFEMGHE---IDSINV-SQDEKPLLYALSTGD------KTLYI 358 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE--EEEEEEEE---ECEEEE-CSSSSCEEEEEETTT------TEEEE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEE--EEEECCCC---cceEEE-CCCCCeEEEEEcCCC------CeEEE
Confidence 578999742 1357999999886543 33332221 123333 3344 577765433 26889
Q ss_pred eeCCCC
Q 012755 424 WDPTDG 429 (457)
Q Consensus 424 y~~~~~ 429 (457)
||..++
T Consensus 359 iD~~t~ 364 (386)
T 3sjl_D 359 HDAESG 364 (386)
T ss_dssp EETTTC
T ss_pred EECCCC
Confidence 999885
No 338
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=27.85 E-value=6.6e+02 Score=27.82 Aligned_cols=137 Identities=12% Similarity=0.090 Sum_probs=72.0
Q ss_pred ccceEEEEeCCCCcEEECCCCCCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCC-CCCCCCCCCCC
Q 012755 264 ILKSAELYNSELGTWETLPDMNLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIEN-MYPSNVGTQSN 342 (457)
Q Consensus 264 ~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~-~~~~~~~~~~~ 342 (457)
....+.+|+...++.+.+...+..-.-.+.+.++|++.+.- -+.+.+||...++--+... ..+
T Consensus 862 ~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~g~Lla~i--------g~~l~vy~l~~~~~L~~~~~~~~-------- 925 (1158)
T 3ei3_A 862 KQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASI--------NSTVRLYEWTTEKELRTECNHYN-------- 925 (1158)
T ss_dssp CCEEEEEEEEETTEEEEEEEEEESSCEEEEEEETTEEEEEE--------TTEEEEEEECTTSCEEEEEEECC--------
T ss_pred CceEEEEEEEECCEEEEEEEEEcCCcCEEEeeeCCEEEEEc--------CCEEEEEECCCCceEEEEeeccc--------
Confidence 45678888887666666543332222345667788766542 2467888887665322111 000
Q ss_pred CCCCCCCEEEEECCEEEEEecCCC--eEEEEECCCCcEEEeccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCCCceEE
Q 012755 343 PAMSSPPLVAVVNNQLYSADQATN--VVKKYNKTNNSWTVVKRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQGEIIV 420 (457)
Q Consensus 343 ~~~r~~~~~~~~~g~ly~~gg~~~--~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~ 420 (457)
.-....+.+.++.|++-. ... .+..|+++.++-..++.-..++ +..++..++..-++.+...+ ...
T Consensus 926 --~i~~~~l~~~~~~I~vgD-~~~Sv~~~~y~~~~~~L~~~a~D~~~~-----~vta~~~ld~~t~l~aD~~g----Nl~ 993 (1158)
T 3ei3_A 926 --NIMALYLKTKGDFILVGD-LMRSVLLLAYKPMEGNFEEIARDFNPN-----WMSAVEILDDDNFLGAENAF----NLF 993 (1158)
T ss_dssp --CSCEEEEEEETTEEEEEE-SSBCEEEEEEETTTTEEEEEEECCSCB-----CEEEEEEEETTEEEEEETTS----EEE
T ss_pred --cEEEEEEeccCCEEEEEE-hhheEEEEEEEcCCCeEEEEEeecccc-----cEEEEEEEccCcEEEEcCCC----cEE
Confidence 001112335577665444 333 4566899999888887544443 23333333332233332222 246
Q ss_pred EEEeeCCC
Q 012755 421 LHSWDPTD 428 (457)
Q Consensus 421 v~~y~~~~ 428 (457)
+..|+|+.
T Consensus 994 vl~~~~~~ 1001 (1158)
T 3ei3_A 994 VCQKDSAA 1001 (1158)
T ss_dssp EEEECTTC
T ss_pred EEecCCCC
Confidence 67778754
No 339
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=27.84 E-value=4.9e+02 Score=26.33 Aligned_cols=237 Identities=7% Similarity=-0.074 Sum_probs=0.0
Q ss_pred ccEEEEEec---------CccEEEEeCCCCcE---EeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCC
Q 012755 160 EHWVYLACI---------LMPWEAFDPLRQRW---MRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIA 227 (457)
Q Consensus 160 ~~~l~~~~~---------~~~~~~ydp~~~~W---~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t 227 (457)
...|..... ...++.+|..+.+. ..+. ..........+|+.++++ ..+.++++|..+
T Consensus 71 g~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~--------~~~~~~~~SPDG~~la~~---~~~~i~~~~~~~ 139 (719)
T 1z68_A 71 RQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP--------RPIQYLCWSPVGSKLAYV---YQNNIYLKQRPG 139 (719)
T ss_dssp SSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC--------SSBCCEEECSSTTCEEEE---ETTEEEEESSTT
T ss_pred CCeEEEEecCceeEEeecceEEEEEECCCCccccceecC--------cccccceECCCCCEEEEE---ECCeEEEEeCCC
Q ss_pred CcEEeCCCCCCCcc------------------ceeEEeeCCEEEEEeeecCCC---------------------------
Q 012755 228 NCWSKCPQMNLPRC------------------LFGSSSLGEVAIVAGGTDKNG--------------------------- 262 (457)
Q Consensus 228 ~~W~~l~~lp~~r~------------------~~~~~~~~~~iyv~GG~~~~~--------------------------- 262 (457)
++-..+..-..... ....-.-+++.++++..+...
T Consensus 140 g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~ 219 (719)
T 1z68_A 140 DPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGA 219 (719)
T ss_dssp SCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTS
T ss_pred CCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCC
Q ss_pred -CccceEEEEeCCCCc---EEECCCC-----CCCCcceeEEEECCEEEEEeccCCCCCCCceEEEEE----CCCCceEEc
Q 012755 263 -CILKSAELYNSELGT---WETLPDM-----NLPRKLCSGFFMDGKFYIIGGMSSPTDPLTCGEEYN----LETRTWKRI 329 (457)
Q Consensus 263 -~~~~~v~~yd~~t~~---W~~~~~~-----p~~r~~~~~~~~~g~iyv~GG~~~~~~~~~~~~~yd----~~t~~W~~~ 329 (457)
.....++++|..+++ |..+... ...........-++++++........ ...++.+| +.++++..+
T Consensus 220 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~--~~~l~~~d~~~~~~~g~~~~~ 297 (719)
T 1z68_A 220 KNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQN--VSVLSICDFREDWQTWDCPKT 297 (719)
T ss_dssp CCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTT--EEEEEEEEECSSSSSEECCGG
T ss_pred CCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccC--eEEEEEEcccCCCCCCceEEE
Q ss_pred C----CCCCCCCCCCCCCCCCCC-----CEEEEECCEEEEE----ecCCCeEEEEECCCCcEEEeccCCCccCCCCcceE
Q 012755 330 E----NMYPSNVGTQSNPAMSSP-----PLVAVVNNQLYSA----DQATNVVKKYNKTNNSWTVVKRLPVRANSFNGWGL 396 (457)
Q Consensus 330 ~----~~~~~~~~~~~~~~~r~~-----~~~~~~~g~ly~~----gg~~~~v~~Yd~~~~~W~~v~~~p~~~~~~~~~~~ 396 (457)
. .... .... .....-+|+.+++ ......++.+|..++..+.+..-... ..+.
T Consensus 298 ~~~~~~~~~----------~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~-----v~~~ 362 (719)
T 1z68_A 298 QEHIEESRT----------GWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWE-----AINI 362 (719)
T ss_dssp GEEEEECSS----------SCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSSC-----EEEE
T ss_pred EecccccCC----------ceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEecccCceE-----EEEE
Q ss_pred EEEEeCCEEEEEcCc----CCCCCceEEEEEeeCCCC
Q 012755 397 AFKACGNSLLVIGGH----RELQGEIIVLHSWDPTDG 429 (457)
Q Consensus 397 ~~~~~~g~lyv~GG~----~~~~~~~~~v~~y~~~~~ 429 (457)
... -++.||..+.. .+.. .++..+.+.+
T Consensus 363 ~~~-d~~~i~~~~~~~~~~~~~~----~l~~~~~~~g 394 (719)
T 1z68_A 363 FRV-TQDSLFYSSNEFEEYPGRR----NIYRISIGSY 394 (719)
T ss_dssp EEE-CSSEEEEEESCGGGCTTCB----EEEEEECSSS
T ss_pred EEE-eCCEEEEEEecCCCCCceE----EEEEEeCCCC
No 340
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=27.60 E-value=4e+02 Score=25.29 Aligned_cols=170 Identities=6% Similarity=-0.034 Sum_probs=0.0
Q ss_pred CCCCCccceeEEeeCCEEEE---EeeecCCCCccceEEEEeCCC---------CcEEECCCCCCCCcceeEEEEC---CE
Q 012755 235 QMNLPRCLFGSSSLGEVAIV---AGGTDKNGCILKSAELYNSEL---------GTWETLPDMNLPRKLCSGFFMD---GK 299 (457)
Q Consensus 235 ~lp~~r~~~~~~~~~~~iyv---~GG~~~~~~~~~~v~~yd~~t---------~~W~~~~~~p~~r~~~~~~~~~---g~ 299 (457)
+++.+-...+...-+..+++ .|+.+ ..+.+||..+ ..+..+..+.........+..+ +.
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~ 163 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYG------SIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPS 163 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTE------EEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTT
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCC------ceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCC
Q ss_pred EEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE--CCEEEEEecCCCeEEEEECCCCc
Q 012755 300 FYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV--NNQLYSADQATNVVKKYNKTNNS 377 (457)
Q Consensus 300 iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~ 377 (457)
+++.|+.++ .+..||..+. ..+..... .......+.. +|+.++.|+..+.|..||+....
T Consensus 164 ~las~s~Dg------~v~iwD~~~~--~~~~~~~~----------~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~ 225 (434)
T 2oit_A 164 MVAVCLADG------SIAVLQVTET--VKVCATLP----------STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQE 225 (434)
T ss_dssp EEEEEETTS------CEEEEEESSS--EEEEEEEC----------GGGCEEEEEECTTSSCEEEEETTSCEEEECTTCCE
T ss_pred EEEEEECCC------eEEEEEcCCC--cceeeccC----------CCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcc
Q ss_pred EEEeccCCCccCCCCcceEEEEEeCCEEEE--EcCcCCCCCceEEEEEeeCCC
Q 012755 378 WTVVKRLPVRANSFNGWGLAFKACGNSLLV--IGGHRELQGEIIVLHSWDPTD 428 (457)
Q Consensus 378 W~~v~~~p~~~~~~~~~~~~~~~~~g~lyv--~GG~~~~~~~~~~v~~y~~~~ 428 (457)
-..+.........+......+.-..+..|+ +...++.-.....+.+|+...
T Consensus 226 ~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 226 KKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp EEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred cccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEecc
No 341
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=27.47 E-value=3.8e+02 Score=24.93 Aligned_cols=114 Identities=14% Similarity=-0.008 Sum_probs=58.6
Q ss_pred ccEEEEEecCccEEEEeCCCC--cEEeCCCCCCCccccCCCeeeEEeCCEEEEEceecCCcEEEEEECCCCcEEe---CC
Q 012755 160 EHWVYLACILMPWEAFDPLRQ--RWMRLPRMQCDECFTSADKESLAVGTQLLVFGRELSGFAIWMYSLIANCWSK---CP 234 (457)
Q Consensus 160 ~~~l~~~~~~~~~~~ydp~~~--~W~~l~~~p~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~v~~yd~~t~~W~~---l~ 234 (457)
++.+|+......++++|..+. .|..-.....+....... ....++.+|++.. .....++.+|..++.|+- ++
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~--~~~~~~~~~vv~p-~~dG~l~a~~~~~G~~~~~~~~~ 86 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEP--SRLETYETLIIEP-FGDGNIYYFNAHQGLQKLPLSIR 86 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCS--CTTTSSEEEEECC-STTTEEEEEETTTEEEEEEEEHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCC--ccccCCcEEEEEE-CCCCEEEEEECCCCcEEeeeccc
Confidence 567788777888999998776 686533200111100000 0112456665531 123468888888776542 11
Q ss_pred CC--CCCccceeE-Ee-------eCCEEEEEeeecCCCCccceEEEEeCCCCc--EEECCC
Q 012755 235 QM--NLPRCLFGS-SS-------LGEVAIVAGGTDKNGCILKSAELYNSELGT--WETLPD 283 (457)
Q Consensus 235 ~l--p~~r~~~~~-~~-------~~~~iyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~ 283 (457)
.+ ..|....+. ++ .++.+| +|+. ...+..+|..|++ |+.-..
T Consensus 87 ~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy-~Gs~------~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 87 QLVSTSPLHLKTNIVVNDSGKIVEDEKVY-TGSM------RTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp HHHTTCSEEEECC----------CCEEEE-ECEE------EEEEEEEETTTCCEEEEESTT
T ss_pred cceeccccccCCCceeecccccccCCEEE-EEec------CCEEEEEECCCCcEEEEEecC
Confidence 11 011111111 12 345554 4543 3578899999987 876543
No 342
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=25.43 E-value=3.8e+02 Score=24.80 Aligned_cols=116 Identities=11% Similarity=0.006 Sum_probs=59.0
Q ss_pred ECCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCCCCEEEEE-----CCEEEEEecC---C--
Q 012755 296 MDGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSSPPLVAVV-----NNQLYSADQA---T-- 365 (457)
Q Consensus 296 ~~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~-----~g~ly~~gg~---~-- 365 (457)
-+|+|||..- ...+.++|. +++ +.+...+.. ........+++.. ++.||+.... .
T Consensus 38 pdG~l~V~e~-------~g~I~~~d~-~G~-~~~~~~~v~------~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~ 102 (354)
T 3a9g_A 38 GGGRYLVTER-------PGRLVLISP-SGK-KLVASFDVA------NVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGH 102 (354)
T ss_dssp ETTEEEEEET-------TTEEEEECS-SCE-EEEEECCCC------CSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGC
T ss_pred CCCeEEEEeC-------CCEEEEEeC-CCc-eEeecccee------ecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCC
Confidence 3788888732 256777874 344 544432210 0001223344444 3689987532 2
Q ss_pred --CeEEEEECCCC--c---EEEe-ccCCCccCCCCcceEEEEEeCCEEEEEcCcCCCC-------CceEEEEEeeCCC
Q 012755 366 --NVVKKYNKTNN--S---WTVV-KRLPVRANSFNGWGLAFKACGNSLLVIGGHRELQ-------GEIIVLHSWDPTD 428 (457)
Q Consensus 366 --~~v~~Yd~~~~--~---W~~v-~~~p~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~-------~~~~~v~~y~~~~ 428 (457)
+.|.+|+...+ . .+.+ ..+|.. ..|...+++ ..-+|+||+.-|..+.. .....|+.++++.
T Consensus 103 ~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~-~~h~~~~l~-~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG 178 (354)
T 3a9g_A 103 IRNRVIRGRLDGSTFKLKEVKTLIDGIPGA-YIHNGGRIR-FGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEG 178 (354)
T ss_dssp EEEEEEEEEECSSSCCEEEEEEEEEEEECC-SSCCCCCEE-ECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTS
T ss_pred cceEEEEEEECCCCcCcCccEEEEEcCCCC-CCcCCceEE-ECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCC
Confidence 57899988765 2 3333 234422 122222232 23478999986643211 1123677777754
No 343
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=25.09 E-value=3.6e+02 Score=23.86 Aligned_cols=194 Identities=9% Similarity=0.049 Sum_probs=98.0
Q ss_pred CCEEEEEceecCCcEEEEEECCCCcEEeCCCCCCCccceeEEeeC-CEEEEEeeecCCCCccceEEEEeCCCCc--EE--
Q 012755 205 GTQLLVFGRELSGFAIWMYSLIANCWSKCPQMNLPRCLFGSSSLG-EVAIVAGGTDKNGCILKSAELYNSELGT--WE-- 279 (457)
Q Consensus 205 ~~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~v~~yd~~t~~--W~-- 279 (457)
++.||++... ...++.+|+.-+.+++++- .......+++..+ +.++|.-- ....+.+|+...+. |.
T Consensus 38 ~~~L~aV~d~--~~~I~~ld~~g~v~~~i~l-~g~~D~EGIa~~~~g~~~vs~E------~~~~l~~~~v~~~~~i~~~~ 108 (255)
T 3qqz_A 38 SNTLFSTINK--PAAIVEMTTNGDLIRTIPL-DFVKDLETIEYIGDNQFVISDE------RDYAIYVISLTPNSEVKILK 108 (255)
T ss_dssp TTEEEEEEET--TEEEEEEETTCCEEEEEEC-SSCSSEEEEEECSTTEEEEEET------TTTEEEEEEECTTCCEEEEE
T ss_pred CCEEEEEECC--CCeEEEEeCCCCEEEEEec-CCCCChHHeEEeCCCEEEEEEC------CCCcEEEEEcCCCCeeeeee
Confidence 5678887654 4579999999777777642 2223344555554 44444311 12456677654433 42
Q ss_pred ECC-CC--CCCCcceeEEEE---CCEEEEEeccCCCCCCCceEEEEEC--CCCceEEcCC--CCCCCCCCCCCCCCCCCC
Q 012755 280 TLP-DM--NLPRKLCSGFFM---DGKFYIIGGMSSPTDPLTCGEEYNL--ETRTWKRIEN--MYPSNVGTQSNPAMSSPP 349 (457)
Q Consensus 280 ~~~-~~--p~~r~~~~~~~~---~g~iyv~GG~~~~~~~~~~~~~yd~--~t~~W~~~~~--~~~~~~~~~~~~~~r~~~ 349 (457)
.+. ++ ........+..+ ++++|+..... ...++.|+- .+..-+.+.. ... ....+...
T Consensus 109 ~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~-----p~~i~~~~g~~~~~~l~i~~~~~~~~-------~~~~~d~S 176 (255)
T 3qqz_A 109 KIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN-----PIEVYKVNGLLSSNELHISKDKALQR-------QFTLDDVS 176 (255)
T ss_dssp EEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS-----SEEEEEEESTTCSSCCEEEECHHHHH-------TCCSSCCC
T ss_pred eeccccccccccCCcceEEEeCCCCEEEEEECcC-----CceEEEEcccccCCceeeecchhhcc-------ccccCCce
Confidence 221 12 122344445444 45899975432 236777772 1211111111 000 00012223
Q ss_pred EEEEE--CCEEEEEecCCCeEEEEECCCCcEEEeccCCCc-----cCCCCcceEEEEEeCCEEEEEcCcCCCCCceEEEE
Q 012755 350 LVAVV--NNQLYSADQATNVVKKYNKTNNSWTVVKRLPVR-----ANSFNGWGLAFKACGNSLLVIGGHRELQGEIIVLH 422 (457)
Q Consensus 350 ~~~~~--~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~~-----~~~~~~~~~~~~~~~g~lyv~GG~~~~~~~~~~v~ 422 (457)
+++.. .|++|++....+.+..+|.+.+.=..+ .+... ....-.-|+++ .-+|.|||+.--+ -+|
T Consensus 177 ~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~-~L~~g~~~l~~~~~qpEGia~-d~~G~lyIvsE~n-------~~y 247 (255)
T 3qqz_A 177 GAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEM-SLTKGSRGLSHNIKQAEGVAM-DASGNIYIVSEPN-------RFY 247 (255)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTCCEEEEE-ECSTTGGGCSSCCCSEEEEEE-CTTCCEEEEETTT-------EEE
T ss_pred eEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEE-EcCCccCCcccccCCCCeeEE-CCCCCEEEEcCCc-------eEE
Confidence 33333 589999998899999999886622221 22211 00111224433 3467899985321 578
Q ss_pred EeeCCC
Q 012755 423 SWDPTD 428 (457)
Q Consensus 423 ~y~~~~ 428 (457)
+|.+..
T Consensus 248 ~f~~~~ 253 (255)
T 3qqz_A 248 RFTPQS 253 (255)
T ss_dssp EEEC--
T ss_pred EEEecC
Confidence 887653
No 344
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=23.76 E-value=6.4e+02 Score=26.33 Aligned_cols=163 Identities=9% Similarity=0.017 Sum_probs=79.4
Q ss_pred CEEEEEceecCCcEEEEEECCCCcEEeCCCCCC-----CccceeEEee---CCEEEEEeeecCCCCccceEEEEeCCCCc
Q 012755 206 TQLLVFGRELSGFAIWMYSLIANCWSKCPQMNL-----PRCLFGSSSL---GEVAIVAGGTDKNGCILKSAELYNSELGT 277 (457)
Q Consensus 206 ~~lyv~GG~~~~~~v~~yd~~t~~W~~l~~lp~-----~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~v~~yd~~t~~ 277 (457)
+.+|+. +.. ..+++-+-.-.+|+.+...+. .+..+++++- .+.+|+..|.... .....+++=+-.-.+
T Consensus 28 ~~~~a~-~~~--ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~-~~~~~v~~S~DgG~T 103 (789)
T 1sqj_A 28 DLLYAR-TDI--GGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVG-DEWAAFYVSEDRGQS 103 (789)
T ss_dssp TCEEEE-ESS--SCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTT-SSCCEEEEESSTTSE
T ss_pred CEEEEE-ecC--CCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCC-CcccEEEEECCCCCc
Confidence 455553 321 247888888889999865332 1223333332 2578887653210 001334433334567
Q ss_pred EEECCC-CC-----CCC-cceeEEEE---CCEEEEEeccCCCCCCCceEEEEECCCCceEEcCCCCCCCCCCCCCCCCCC
Q 012755 278 WETLPD-MN-----LPR-KLCSGFFM---DGKFYIIGGMSSPTDPLTCGEEYNLETRTWKRIENMYPSNVGTQSNPAMSS 347 (457)
Q Consensus 278 W~~~~~-~p-----~~r-~~~~~~~~---~g~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~r~ 347 (457)
|+.+.. .+ ..| ....+++. .+.+|+. ... ..+++=+-.-.+|+++...+.. + ....
T Consensus 104 W~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g-~~~------~gl~~S~DgG~TW~~~~~~~~~----~---~~~~ 169 (789)
T 1sqj_A 104 FTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMG-TRT------EGIWKSSDRAKTWTNVTSIPDA----F---TNGI 169 (789)
T ss_dssp EEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEE-CSS------SCEEEESSTTSSCEEETTSCCC----C---STTT
T ss_pred ceeccCCcccCccCCCccceeEEEEcCCCCCEEEEE-ecc------CCEEEECCCCcccCCCccCccc----c---CCCC
Confidence 998742 11 112 12334443 3567763 211 2233333334689998764320 0 0111
Q ss_pred CCEEEEE----CCEEEEEecCCCeEEEEECCCCcEEEeccCCC
Q 012755 348 PPLVAVV----NNQLYSADQATNVVKKYNKTNNSWTVVKRLPV 386 (457)
Q Consensus 348 ~~~~~~~----~g~ly~~gg~~~~v~~Yd~~~~~W~~v~~~p~ 386 (457)
....+++ .+.||+.......+++=.-...+|+.+..+|.
T Consensus 170 ~~~~i~~~p~~~~~~~~~~~~~~~v~~S~DgG~TW~~~~~~~~ 212 (789)
T 1sqj_A 170 GYTSVIFDPERNGTIYASATAPQGMYVTHDGGVSWEPVAGQPS 212 (789)
T ss_dssp CEEEEEECTTSTTCEEEEESSTTCEEEESSTTSSCEECTTCCC
T ss_pred CeEEEEECCCCCCEEEEEEcCCCeEEEEcCCCcCcccCCCCcC
Confidence 2223333 24677765322455554445668999875543
No 345
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=20.35 E-value=5.4e+02 Score=24.14 Aligned_cols=178 Identities=8% Similarity=0.009 Sum_probs=0.0
Q ss_pred EEEEeCCCCcEEeCCCCCCCccccCCCeeeEEeCCEE--EEEceecC--CcEEEEE--ECCCCcEEeCCCC--C--CC-c
Q 012755 172 WEAFDPLRQRWMRLPRMQCDECFTSADKESLAVGTQL--LVFGRELS--GFAIWMY--SLIANCWSKCPQM--N--LP-R 240 (457)
Q Consensus 172 ~~~ydp~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~l--yv~GG~~~--~~~v~~y--d~~t~~W~~l~~l--p--~~-r 240 (457)
+.+||..-+.-..++.-......... .+.+++.- +++.-... .+.+.+| ||.+++++.+... | .. +
T Consensus 52 L~Vydl~G~~l~~~~~g~~nnVD~r~---~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~ 128 (355)
T 3amr_A 52 LVVYSLDGKMLHSYNTGKLNNVDIRY---DFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAIN 128 (355)
T ss_dssp EEEEETTSCEEEEECCSCEEEEEEEE---EEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCS
T ss_pred EEEEcCCCcEEEEccCCCcccEEEec---ccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCC
Q ss_pred cceeEEee----CCEEEEEeeecCCCCccceEEEEeCCCC-----cEEECCCCCCCCcceeEEEEC--CEEEEEeccCCC
Q 012755 241 CLFGSSSL----GEVAIVAGGTDKNGCILKSAELYNSELG-----TWETLPDMNLPRKLCSGFFMD--GKFYIIGGMSSP 309 (457)
Q Consensus 241 ~~~~~~~~----~~~iyv~GG~~~~~~~~~~v~~yd~~t~-----~W~~~~~~p~~r~~~~~~~~~--g~iyv~GG~~~~ 309 (457)
.-++++.+ .+++|++-. .....++.|+.... +=+.+..++.+-.--.+++-+ +.||+-
T Consensus 129 ~pyGlcly~~~~~g~~yafV~-----~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~------ 197 (355)
T 3amr_A 129 EVYGFTLYHSQKTGKYYAMVT-----GKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIA------ 197 (355)
T ss_dssp SCCCEEEEECTTTCCEEEEEE-----CSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEE------
T ss_pred CeeEEEEEecCCCCcEEEEEE-----CCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEe------
Q ss_pred CCCCceEEEEECCCCc---eEEcCCCCCCCCCCCCCCCC---CCCCEEEEE-C----CEEEEEecCCCeEEEEECC
Q 012755 310 TDPLTCGEEYNLETRT---WKRIENMYPSNVGTQSNPAM---SSPPLVAVV-N----NQLYSADQATNVVKKYNKT 374 (457)
Q Consensus 310 ~~~~~~~~~yd~~t~~---W~~~~~~~~~~~~~~~~~~~---r~~~~~~~~-~----g~ly~~gg~~~~v~~Yd~~ 374 (457)
+-...+|+||.+-.. -+.+..... . ....+++.+ . +.|++.....+.+.+||.+
T Consensus 198 -eEd~GIw~~da~p~~~~~~~~v~~~~~----------g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 198 -EEDEAIWKFSAEPDGGSNGTVIDRADG----------RHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp -ETTTEEEEEECSTTSCSCCEEEEEBSS----------SSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred -cccceEEEEeCCcCCCCCceEEEEecC----------CccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Done!