BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012756
(457 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2 OS=Arabidopsis thaliana
GN=APRR2 PE=2 SV=2
Length = 535
Score = 332 bits (852), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 243/482 (50%), Positives = 296/482 (61%), Gaps = 88/482 (18%)
Query: 2 MKCIALGAVEFLRKPLSEDKLRNLWQHVVHKAFNAGGSALSDSLKPVKESVVSMLHLKLE 61
MKCIALGAVEFL+KPLS +KL+N+WQHVVHKAFN GGS +S SLKPVKESVVSMLHL+
Sbjct: 111 MKCIALGAVEFLQKPLSPEKLKNIWQHVVHKAFNDGGSNVSISLKPVKESVVSMLHLE-- 168
Query: 62 NGESKNEKSENTEYVLVPQQSDNEQSVPNDKYPAPSTPQLKQGGRLLDDIDCQDNTNFS- 120
T+ + +K PAPSTPQLKQ RLLD DCQ+N NFS
Sbjct: 169 -----------TDMTI------------EEKDPAPSTPQLKQDSRLLDG-DCQENINFSM 204
Query: 121 ------TEKESAE--QD-GESKFVETTCGNSIAEGTLQEDKP--QRPRETIVKEEHDPTN 169
TEK++ E QD GESK V+TT L +DK + R KEE T
Sbjct: 205 ENVNSSTEKDNMEDHQDIGESKSVDTT------NRKLDDDKVVVKEERGDSEKEEEGETG 258
Query: 170 GSKTE-CNMLPLPYEKDNLKGSNCVIENPSKASGLQNSCGNKANRKKMKVDWTPELHKKF 228
+E + + + ++D K N K+SG++N GNK +RKK VDWTPELHKKF
Sbjct: 259 DLISEKTDSVDIHKKEDETKPIN-------KSSGIKNVSGNKTSRKK--VDWTPELHKKF 309
Query: 229 VQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHILPKED-DRKWPHARD 287
VQAVEQLGVDQAIPSRILELMKV LTRHNVASHLQK+R HR++ILPK+D + +W +R+
Sbjct: 310 VQAVEQLGVDQAIPSRILELMKVGTLTRHNVASHLQKFRQHRKNILPKDDHNHRWIQSRE 369
Query: 288 QML---RNY----YPHKPIMAFPPYHSNHLVPTGPVYPVWGAPSNHLAAVQMWAPPGYPP 340
RNY H+P+MA+P + + P G + P+W P + G PP
Sbjct: 370 NHRPNQRNYNVFQQQHRPVMAYPVWGLPGVYPPGAIPPLWPPPLQSI---------GQPP 420
Query: 341 WQQAESWNWK-PYPGMPADAWGCPVMPLPNGPY---SSFPQGASGYHNSGVDDNSYAMPQ 396
W+WK PYP + +AWGCPV P G Y S+ G Y N G + MP
Sbjct: 421 -----PWHWKPPYPTVSGNAWGCPVGPPVTGSYITPSNTTAGGFQYPN-GAETGFKIMPA 474
Query: 397 NSVDLHPAEEVIDKVVKEAISKPWLPLPLGLKPPSADSVLAELSRQGISTIPPR---ING 453
+ P EE++D+VVKEAISKPWLPLPLGLKPPSA+SVLAEL+RQGIS +P ING
Sbjct: 475 S----QPDEEMLDQVVKEAISKPWLPLPLGLKPPSAESVLAELTRQGISAVPSSSCLING 530
Query: 454 SH 455
SH
Sbjct: 531 SH 532
>sp|Q9FFH0|GLK2_ARATH Transcription activator GLK2 OS=Arabidopsis thaliana GN=GLK2 PE=2
SV=1
Length = 386
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 113/273 (41%), Positives = 143/273 (52%), Gaps = 69/273 (25%)
Query: 213 RKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRH 272
+KK KVDWTPELH+KFVQAVEQLGVD+A+PSRILE+M V+ LTRHNVASHLQKYR HR+H
Sbjct: 145 KKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKH 204
Query: 273 ILPKE-DDRKWPHARDQMLRNYYPH--------KPIMAFPPY----HSNHLVPTGPVYPV 319
+L +E + W R + P + +PP+ H H P V
Sbjct: 205 LLAREAEAASWNLRRHATVAVPGVGGGGKKPWTAPALGYPPHVAPMHHGHFRPLH----V 260
Query: 320 WGAPS------NHLAAVQM-------------WAPPGYPPWQQAESWNWKPYPGMPADAW 360
WG P+ N A+ W PG+PP+ W+ +P
Sbjct: 261 WGHPTWPKHKPNTPASAHRTYPMPAIAAAPASW--PGHPPY-----WHQQPL-------- 305
Query: 361 GCPVMPLPNGPYSSFPQG---ASGYHNS-GVDDNSYAMPQNSVDLHPAEEVIDKVVKEAI 416
+PQG AS H+S GV +D+HP+ E ID + + I
Sbjct: 306 --------------YPQGYGMASSNHSSIGVPTRQLGPTNPPIDIHPSNESIDAAIGDVI 351
Query: 417 SKPWLPLPLGLKPPSADSVLAELSRQGISTIPP 449
SKPWLPLPLGLKPPS D V+ EL RQG+S +PP
Sbjct: 352 SKPWLPLPLGLKPPSVDGVMTELQRQGVSNVPP 384
>sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1 OS=Arabidopsis thaliana GN=GLK1 PE=2
SV=2
Length = 420
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 152/286 (53%), Gaps = 40/286 (13%)
Query: 198 SKASGLQNSCGNKANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRH 257
S AS N N ++K+KVDWTPELH++FV+AVEQLGVD+A+PSRILELM V LTRH
Sbjct: 136 SSASSKNNRISNNEGKRKVKVDWTPELHRRFVEAVEQLGVDKAVPSRILELMGVHCLTRH 195
Query: 258 NVASHLQKYRMHRRHILPKE-DDRKWPHAR------------DQMLRNYYPHKPIMAFPP 304
NVASHLQKYR HR+H+L +E + W R + + P + FPP
Sbjct: 196 NVASHLQKYRSHRKHLLAREAEAANWTRKRHIYGVDTGANLNGRTKNGWLAPAPTLGFPP 255
Query: 305 YHSNHLVPTG-------PVYPVWGAPSNHLAAV-QMW----APPGY----PPWQQAESWN 348
+ P P++ VWG P+ + + +W PP PP+ ++S
Sbjct: 256 PPPVAVAPPPVHHHHFRPLH-VWGHPTVDQSIMPHVWPKHLPPPSTAMPNPPFWVSDSPY 314
Query: 349 WKPY-----PGMPADAWGCPVMPLPNGPYSSFPQGASGYHNSGVDDNSYAMPQNSVDLHP 403
W P P +P A P+ P++ P N G + + VDLHP
Sbjct: 315 WHPMHNGTTPYLPTVATRFRAPPVAGIPHALPPHHTMYKPNLG-----FGGARPPVDLHP 369
Query: 404 AEEVIDKVVKEAISKPWLPLPLGLKPPSADSVLAELSRQGISTIPP 449
++E +D + + +++PWLPLPLGL PP+ D V+ EL R G+S +PP
Sbjct: 370 SKESVDAAIGDVLTRPWLPLPLGLNPPAVDGVMTELHRHGVSEVPP 415
>sp|Q5Z5I4|GLK1_ORYSJ Probable transcription factor GLK1 OS=Oryza sativa subsp. japonica
GN=GLK1 PE=2 SV=1
Length = 455
Score = 115 bits (288), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 138/274 (50%), Gaps = 46/274 (16%)
Query: 218 VDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHILPKE 277
VDWTPELH++FVQAVEQLG+D+A+PSRILE+M ++ LTRHN+ASHLQKYR HR+H++ +E
Sbjct: 183 VDWTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHMIARE 242
Query: 278 DDRKWPHARDQMLRNYYPHKPIMAFPPYHSNHLVPT--------------------GPVY 317
+ R Q+ Y +A P + VPT P++
Sbjct: 243 AEAASWTQRRQI---YAAGGGAVAKRPESNAWTVPTIGFPPPPPPPPSPAPIQHFARPLH 299
Query: 318 PVWGAPSNHLAAVQMWAPPGYPP-----------WQQAESWNWKPY----PGMPADAWGC 362
VWG P+ + V +W P P ++ PY +P C
Sbjct: 300 -VWGHPTMDPSRVPVWPPRHLVPRGPAPPWVPPPPPSDPAFWHHPYMRGPAHVPTQGTPC 358
Query: 363 PVMPLPNGPYSSFPQGASGYHNS-------GVDDNSYAMPQNSVDLHPAEEVIDKVVKEA 415
MP+P + + P + + Q + + P+ E ID + +
Sbjct: 359 MAMPMPAARFPAPPVPGVVPCPMYRPLTPPALASKNQQDAQLQLQVQPSSESIDAAIGDV 418
Query: 416 ISKPWLPLPLGLKPPSADSVLAELSRQGISTIPP 449
+SKPWLPLPLGLKPPS DSV+ EL RQG++ +PP
Sbjct: 419 LSKPWLPLPLGLKPPSVDSVMGELQRQGVANVPP 452
>sp|Q5NAN5|GLK2_ORYSJ Probable transcription factor GLK2 OS=Oryza sativa subsp. japonica
GN=GLK2 PE=2 SV=1
Length = 539
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 48/69 (69%), Positives = 62/69 (89%)
Query: 209 NKANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRM 268
N ++K+KVDWTPELH++FVQAVEQLG+D+A+PSRILELM +E LTRHN+ASHLQKYR
Sbjct: 209 NSHGKRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASHLQKYRS 268
Query: 269 HRRHILPKE 277
HR+H++ +E
Sbjct: 269 HRKHLMARE 277
>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana
GN=ARR18 PE=2 SV=2
Length = 635
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 73/128 (57%), Gaps = 8/128 (6%)
Query: 211 ANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHR 270
RKK +V W+ ELH+KFV AV+QLG+D+A+P +IL+LM +EGLTR NVASHLQKYR++
Sbjct: 190 GTRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVASHLQKYRLYL 249
Query: 271 RHILPKEDDRKWPHARDQMLRNYYPHKPIMAFPPYHSNHLVPTGPVYPVWGAPSNHLAAV 330
+ I + P A +Y+ + + + +P+ + +HL +
Sbjct: 250 KKIDEGQQQNMTPDAFGTRDSSYFQMAQLDGLRDFTAARQIPSSGLL-----SRSHLTKL 304
Query: 331 QMWAPPGY 338
Q PP Y
Sbjct: 305 Q---PPMY 309
Score = 35.8 bits (81), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 1 MMKCIALGAVEFLRKPLSEDKLRNLWQHVVHK 32
+MK I GA ++L KP+ +L+N+W HVV K
Sbjct: 104 VMKGIIHGACDYLVKPVGLKELQNIWHHVVKK 135
>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Arabidopsis thaliana
GN=ARR1 PE=1 SV=2
Length = 690
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 52/65 (80%)
Query: 209 NKANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRM 268
+ +N KK +V W+ ELH++FV AV QLGV++A+P +ILELM V GLTR NVASHLQKYR+
Sbjct: 231 DASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASHLQKYRI 290
Query: 269 HRRHI 273
+ R +
Sbjct: 291 YLRRL 295
Score = 39.3 bits (90), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 24/32 (75%)
Query: 1 MMKCIALGAVEFLRKPLSEDKLRNLWQHVVHK 32
++K + GAV++L KP+ + L+N+WQHVV K
Sbjct: 124 VLKGVTHGAVDYLIKPVRMEALKNIWQHVVRK 155
>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana
GN=ARR2 PE=1 SV=1
Length = 664
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 49/60 (81%)
Query: 214 KKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHI 273
KK +V W+ ELH++FV AV QLGVD+A+P +ILE+M V GLTR NVASHLQKYR++ R +
Sbjct: 215 KKPRVVWSVELHQQFVAAVNQLGVDKAVPKKILEMMNVPGLTRENVASHLQKYRIYLRRL 274
Score = 39.7 bits (91), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 1 MMKCIALGAVEFLRKPLSEDKLRNLWQHVVHKAFN 35
++K + GAV++L KP+ + L+N+WQHVV K N
Sbjct: 115 VLKGVTHGAVDYLIKPVRIEALKNIWQHVVRKKRN 149
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 49/61 (80%)
Query: 213 RKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRH 272
+KK +V WT ELHKKFV AV QLG ++A+P +IL+LM VE LTR NVASHLQK+R++ +
Sbjct: 193 QKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASHLQKFRLYLKR 252
Query: 273 I 273
I
Sbjct: 253 I 253
Score = 39.7 bits (91), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 1 MMKCIALGAVEFLRKPLSEDKLRNLWQHVVHKAFN 35
+MK + GA ++L KP+ ++L+N+WQHVV F+
Sbjct: 104 VMKGVTHGACDYLLKPVRIEELKNIWQHVVRSRFD 138
>sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14 OS=Arabidopsis thaliana
GN=ARR14 PE=1 SV=2
Length = 382
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 50/63 (79%)
Query: 211 ANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHR 270
N KK +V W+ ELH++FV AV +LG+D+A+P RILELM V GL+R NVASHLQK+R++
Sbjct: 196 GNSKKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILELMNVPGLSRENVASHLQKFRLYL 255
Query: 271 RHI 273
+ +
Sbjct: 256 KRL 258
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 1 MMKCIALGAVEFLRKPLSEDKLRNLWQHVVHK 32
+M I GA ++L KP+ ++L+N+WQHVV +
Sbjct: 99 VMTGINHGACDYLIKPIRPEELKNIWQHVVRR 130
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 213 RKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRH 272
+KK +V WT ELH KF+ AV+ LGV++A+P +IL+LM V+ LTR NVASHLQK+R+ +
Sbjct: 181 QKKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKFRVALKK 240
Query: 273 ILPKEDDRKWPHARDQMLRNYYPHKPIMAFPPYHSNHLVPTG 314
+ + A D K + F YH + +P G
Sbjct: 241 VSDDAIQQANRAAIDSHFMQMNSQKGLGGF--YHHHRGIPVG 280
Score = 36.6 bits (83), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 1 MMKCIALGAVEFLRKPLSEDKLRNLWQHVV 30
+MK + GA ++L KP+ ++L+N+WQHVV
Sbjct: 104 VMKGVKHGACDYLLKPVRIEELKNIWQHVV 133
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21 OS=Arabidopsis
thaliana GN=ARR21 PE=2 SV=3
Length = 613
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 42/60 (70%)
Query: 214 KKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHI 273
KK K+ WT LH F+QA+ +G+D+A+P +IL M V LTR NVASHLQKYR+ R +
Sbjct: 221 KKKKIQWTDSLHDLFLQAIRHIGLDKAVPKKILAFMSVPYLTRENVASHLQKYRIFLRRV 280
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza sativa subsp.
japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 14/109 (12%)
Query: 168 TNGSKTECNMLPLPYE-KDNLKGSNCVIENPSKASGLQNSCGNKANRKKMKVDWTPELHK 226
T + TE ++ PL E +D++ N I + K ++ WT +LH+
Sbjct: 163 TRSTATEASLAPLENEVRDDMVNYNGEITDIRDLG-------------KSRLTWTTQLHR 209
Query: 227 KFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHILP 275
+F+ AV LG D+A+P +IL +MKV+ LTR VASHLQKYRM + +P
Sbjct: 210 QFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIP 258
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 1 MMKCIALGAVEFLRKPLSEDKLRNLWQHVVHK 32
+MK +A GA +FL KP+ ++L N+WQH+ K
Sbjct: 98 VMKYVANGAFDFLLKPVRIEELSNIWQHIFRK 129
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 14/109 (12%)
Query: 168 TNGSKTECNMLPLPYE-KDNLKGSNCVIENPSKASGLQNSCGNKANRKKMKVDWTPELHK 226
T + TE ++ PL E +D++ N I + K ++ WT +LH+
Sbjct: 163 TRSTATEASLAPLENEVRDDMVNYNGEITDIRDLG-------------KSRLTWTTQLHR 209
Query: 227 KFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHILP 275
+F+ AV LG D+A+P +IL +MKV+ LTR VASHLQKYRM + +P
Sbjct: 210 QFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIP 258
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 1 MMKCIALGAVEFLRKPLSEDKLRNLWQHVVHK 32
+MK +A GA +FL KP+ ++L N+WQH+ K
Sbjct: 98 VMKYVANGAFDFLLKPVRIEELSNIWQHIFRK 129
>sp|Q9LZJ8|ARR20_ARATH Putative two-component response regulator ARR20 OS=Arabidopsis
thaliana GN=ARR20 PE=2 SV=1
Length = 426
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 70/114 (61%), Gaps = 19/114 (16%)
Query: 183 EKDNLKGSNCVIENPSKASGLQNSCGNKANR---KKMKVDWTPELHKKFVQAVEQLG-VD 238
E+DNL SN G +N+C +K + KK ++ WTPELH KF AVE++G ++
Sbjct: 184 EQDNLYESN--------EEGSKNTCDHKEEKSPTKKPRMQWTPELHHKFEVAVEKMGSLE 235
Query: 239 QAIPSRILELMK----VEGLTRHNVASHLQKYRM-HRRHILPKE--DDRKWPHA 285
+A P IL+ M+ V+GLTR+NVASHLQKYR ++ P+E +D W +A
Sbjct: 236 KAFPKTILKYMQEELNVQGLTRNNVASHLQKYRQSSKKTCTPQEPQEDFVWGNA 289
Score = 36.2 bits (82), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 1 MMKCIALGAVEFLRKPLSEDKLRNLWQHVVHKAFNAGG 38
+M+ I GA +FL KP+S++ + LW+HV K + G
Sbjct: 126 VMESIKYGACDFLVKPVSKEVIAVLWRHVYRKRMSKSG 163
>sp|Q9ZVD3|ARR13_ARATH Putative two-component response regulator ARR13 OS=Arabidopsis
thaliana GN=ARR13 PE=2 SV=2
Length = 572
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 9/94 (9%)
Query: 214 KKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHI 273
KK K+ WT L F+QA++ +G D+ +P +IL +M V LTR NVASHLQKYR+ + +
Sbjct: 224 KKKKIWWTNPLQDLFLQAIQHIGYDKVVPKKILAIMNVPYLTRENVASHLQKYRLFVKRV 283
Query: 274 LPKE-----DDRKWPHARDQMLRNYYPHKPIMAF 302
+ + DR +D M R + +P + +
Sbjct: 284 VHQGRFSMLSDR----GKDSMFRQTHIKEPYVNY 313
>sp|Q9FJ16|APRR4_ARATH Putative two-component response regulator-like APRR4 OS=Arabidopsis
thaliana GN=APRR4 PE=3 SV=1
Length = 292
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 5/116 (4%)
Query: 152 KPQRPRETIVKEEHDPTNGSKTECNMLPLPYEKDNLKGSNCV---IENPSKASGLQNSCG 208
K R R ++V E + G K+ + K S+C+ + + +C
Sbjct: 159 KKMRERRSVVTGEAEKAAGEKSSSVGDSTIRNPNKSKRSSCLEAEVNEEDRHDHNDRACA 218
Query: 209 NKANRKKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQ 264
+ A KK +V W ELH+ F+ AV+ LG+++A+P +IL++MKV+ ++R NVASHLQ
Sbjct: 219 SSA--KKRRVVWDEELHQNFLNAVDFLGLERAVPKKILDVMKVDYISRENVASHLQ 272
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=Arabidopsis thaliana
GN=ARR11 PE=1 SV=1
Length = 521
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 217 KVDWTPELHKKFVQAVEQLGVD-QAIPSRILELMKVEGLTRHNVASHLQKYRMH 269
+V W+ ELH KFV AV Q+G D +A P +IL+LM V LTR NVASHLQKYR++
Sbjct: 195 RVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYRLY 248
Score = 33.1 bits (74), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 1 MMKCIALGAVEFLRKPLSEDKLRNLWQHVVHKAF 34
+MK + GA ++L KP+ +L+ +WQHV+ K
Sbjct: 98 VMKGVQHGACDYLLKPIRMKELKIIWQHVLRKKL 131
>sp|Q8GUN5|PHL1_ARATH Protein PHR1-LIKE 1 OS=Arabidopsis thaliana GN=PHL1 PE=1 SV=1
Length = 413
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Query: 193 VIENPSKASGLQNSCGNKANRKKMKVDWTPELHKKFVQAVEQLG-VDQAIPSRILELMKV 251
++ + + SG +S ++++M+ WTPELH+ FV+AV QLG ++A P +L+L+
Sbjct: 211 MVSSEDQLSGRNSSSSVATSKQRMR--WTPELHEAFVEAVNQLGGSERATPKAVLKLLNN 268
Query: 252 EGLTRHNVASHLQKYRMHR 270
GLT ++V SHLQKYR R
Sbjct: 269 PGLTIYHVKSHLQKYRTAR 287
>sp|Q9M9B9|ARR19_ARATH Putative two-component response regulator ARR19 OS=Arabidopsis
thaliana GN=ARR19 PE=2 SV=2
Length = 407
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 54/75 (72%), Gaps = 5/75 (6%)
Query: 200 ASGLQNSCGNKANR-KKMKVDWTPELHKKFVQAVEQLG-VDQAIPSRILEL---MKVEGL 254
+G+QN + + +K ++ WT ELH+KF++A+E +G +++A P ++E M++EG+
Sbjct: 199 GNGIQNMEKKQGKKPRKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGI 258
Query: 255 TRHNVASHLQKYRMH 269
TR NVASHLQK+R++
Sbjct: 259 TRSNVASHLQKHRIN 273
Score = 36.6 bits (83), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 1 MMKCIALGAVEFLRKPLSEDKLRNLWQHVVHK 32
+MK GA +++ KP+ E+ + N+WQH+V K
Sbjct: 121 VMKATFYGACDYVVKPVKEEVMANIWQHIVRK 152
>sp|Q9SAK5|APL_ARATH Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL
PE=2 SV=2
Length = 358
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 217 KVDWTPELHKKFVQAVEQLGV-DQAIPSRILELMKVEGLTRHNVASHLQKYRM 268
++ WT ELH++FV AV QLG D+A P I+ +M V+GLT +++ SHLQK+R+
Sbjct: 36 RLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 88
>sp|Q700D9|MYBF_ARATH Putative Myb family transcription factor At1g14600 OS=Arabidopsis
thaliana GN=At1g14600 PE=2 SV=2
Length = 255
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 217 KVDWTPELHKKFVQAVEQLGVD-QAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHILP 275
++ WTPELH+ FV AV+ LG +A P +L++M V+GLT +V SHLQ YR R +L
Sbjct: 25 RLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQMYRGSRITLLG 84
Query: 276 K 276
K
Sbjct: 85 K 85
>sp|Q0J235|ROLL9_ORYSJ Probable transcription factor RL9 OS=Oryza sativa subsp. japonica
GN=RL9 PE=2 SV=2
Length = 532
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 210 KANRKKMKVDWTPELHKKFVQAVEQLGV-DQAIPSRILELMKVEGLTRHNVASHLQKYR 267
K + + ++ WT LH +FV AVE LG ++A P +LELM V+ LT +V SHLQ YR
Sbjct: 319 KRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYR 377
>sp|Q9C616|KAN2_ARATH Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2
PE=2 SV=1
Length = 388
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 217 KVDWTPELHKKFVQAVEQLGV-DQAIPSRILELMKVEGLTRHNVASHLQKYR 267
++ WT LH +FV AVE LG ++A P +LELM V+ LT +V SHLQ YR
Sbjct: 215 RMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYR 266
>sp|Q93WJ9|KAN1_ARATH Transcription repressor KAN1 OS=Arabidopsis thaliana GN=KAN1 PE=1
SV=1
Length = 403
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 217 KVDWTPELHKKFVQAVEQLGV-DQAIPSRILELMKVEGLTRHNVASHLQKYR 267
++ WT LH +FV AVE LG ++A P +LELM V+ LT +V SHLQ YR
Sbjct: 221 RMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYR 272
>sp|Q941I2|KAN3_ARATH Probable transcription factor KAN3 OS=Arabidopsis thaliana GN=KAN3
PE=2 SV=1
Length = 322
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 217 KVDWTPELHKKFVQAVEQLGV-DQAIPSRILELMKVEGLTRHNVASHLQKYR 267
++ WT LH FV AV+ LG ++A P +LELM V+ LT +V SHLQ YR
Sbjct: 166 RMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQMYR 217
>sp|Q9FJV5|KAN4_ARATH Probable transcription factor KAN4 OS=Arabidopsis thaliana GN=KAN4
PE=1 SV=1
Length = 276
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 217 KVDWTPELHKKFVQAVEQLGV-DQAIPSRILELMKVEGLTRHNVASHLQKYR 267
++ WT LH FV AV+ LG ++A P +LELM V+ LT +V SHLQ YR
Sbjct: 107 RMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYR 158
>sp|Q9C9F6|APRR6_ARATH Putative two-component response regulator-like APRR6 OS=Arabidopsis
thaliana GN=APRR6 PE=3 SV=2
Length = 755
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 220 WTPELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHI---LPK 276
W E H KF+ A+ LG + P ILE+M LT V SHLQKY+ I LP+
Sbjct: 227 WNSERHMKFIAAISILGEEDFRPKSILEIMNDPNLTHRQVGSHLQKYKAQIDQISYTLPR 286
Query: 277 EDDR 280
+ R
Sbjct: 287 NESR 290
>sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp.
japonica GN=PRR95 PE=2 SV=1
Length = 623
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 1 MMKCIALGAVEFLRKPLSEDKLRNLWQHVVHKAFNAG 37
+ KC+ GA +FL KP+ +++LRNLWQHV K ++G
Sbjct: 133 VFKCMLKGAADFLVKPIRKNELRNLWQHVWRKQLSSG 169
>sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
japonica GN=PRR73 PE=2 SV=1
Length = 767
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 25/29 (86%)
Query: 1 MMKCIALGAVEFLRKPLSEDKLRNLWQHV 29
+ KC++ GAV+FL KP+ +++L+NLWQHV
Sbjct: 171 VFKCLSKGAVDFLVKPIRKNELKNLWQHV 199
>sp|A2XFB7|PRR73_ORYSI Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
indica GN=PRR73 PE=2 SV=2
Length = 767
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 25/29 (86%)
Query: 1 MMKCIALGAVEFLRKPLSEDKLRNLWQHV 29
+ KC++ GAV+FL KP+ +++L+NLWQHV
Sbjct: 171 VFKCLSKGAVDFLVKPIRKNELKNLWQHV 199
>sp|A2YQ93|PRR37_ORYSI Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
indica GN=PRR37 PE=2 SV=2
Length = 742
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 25/29 (86%)
Query: 1 MMKCIALGAVEFLRKPLSEDKLRNLWQHV 29
+ KC++ GAV+FL KP+ +++L+NLWQHV
Sbjct: 152 VFKCLSKGAVDFLVKPIRKNELKNLWQHV 180
>sp|Q0D3B6|PRR37_ORYSJ Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
japonica GN=PRR37 PE=2 SV=1
Length = 742
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 25/29 (86%)
Query: 1 MMKCIALGAVEFLRKPLSEDKLRNLWQHV 29
+ KC++ GAV+FL KP+ +++L+NLWQHV
Sbjct: 152 VFKCLSKGAVDFLVKPIRKNELKNLWQHV 180
>sp|Q9LVG4|APRR3_ARATH Two-component response regulator-like APRR3 OS=Arabidopsis thaliana
GN=APRR3 PE=1 SV=1
Length = 495
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 25/29 (86%)
Query: 1 MMKCIALGAVEFLRKPLSEDKLRNLWQHV 29
+ KC++ GAV+FL KP+ +++L+NLWQHV
Sbjct: 154 VFKCLSNGAVDFLVKPIRKNELKNLWQHV 182
>sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR5 OS=Arabidopsis thaliana
GN=APRR5 PE=1 SV=2
Length = 558
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 1 MMKCIALGAVEFLRKPLSEDKLRNLWQHV 29
+ KC+ GA ++L KPL ++LRNLWQHV
Sbjct: 140 VYKCMLKGAADYLVKPLRRNELRNLWQHV 168
>sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7 OS=Arabidopsis thaliana
GN=APRR7 PE=2 SV=1
Length = 727
Score = 41.2 bits (95), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 24/29 (82%)
Query: 1 MMKCIALGAVEFLRKPLSEDKLRNLWQHV 29
+ KC++ GAV+FL KP+ +++L+ LWQHV
Sbjct: 168 VFKCLSKGAVDFLVKPIRKNELKILWQHV 196
>sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR9 OS=Arabidopsis thaliana
GN=APRR9 PE=2 SV=2
Length = 468
Score = 40.4 bits (93), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 24/29 (82%)
Query: 1 MMKCIALGAVEFLRKPLSEDKLRNLWQHV 29
++KC+ GA ++L KP+ +++L+NLWQHV
Sbjct: 127 VLKCMLRGAADYLIKPMRKNELKNLWQHV 155
>sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 OS=Oryza sativa subsp.
japonica GN=PRR1 PE=2 SV=2
Length = 518
Score = 40.4 bits (93), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 1 MMKCIALGAVEFLRKPLSEDKLRNLWQHV 29
++KC+ LGA E+L KPL ++L NLW HV
Sbjct: 118 VVKCLRLGAAEYLVKPLRMNELLNLWTHV 146
>sp|Q9LKL2|APRR1_ARATH Two-component response regulator-like APRR1 OS=Arabidopsis thaliana
GN=APRR1 PE=1 SV=1
Length = 618
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 22/29 (75%)
Query: 1 MMKCIALGAVEFLRKPLSEDKLRNLWQHV 29
++KC+ LGA ++L KPL ++L NLW H+
Sbjct: 109 VVKCLKLGAADYLVKPLRTNELLNLWTHM 137
>sp|O39927|POLG_HCVEU Genome polyprotein OS=Hepatitis C virus genotype 6a (isolate EUHK2)
PE=1 SV=3
Length = 3018
Score = 33.1 bits (74), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 15/98 (15%)
Query: 246 LELMKVEGLTRHNVASHLQKYRMHRRHILPKEDDRKWP---HARDQMLRNYYPHKPIMAF 302
+EL++ L +H + SH+ + + + ++ + +P R+ + +P F
Sbjct: 2228 MELLQANLLWKHEMGSHIPRVQSENK-VVVLDSFELYPLEYEEREISVSVECHRQPRCKF 2286
Query: 303 PPYHSNHLVPTGPVYPVWGAPSNHLAAVQMWAPPGYPP 340
PP V+PVW P N+ +Q W PGY P
Sbjct: 2287 PP-----------VFPVWARPDNNPPFIQAWQMPGYEP 2313
>sp|Q5PBG4|RPOB_ANAMM DNA-directed RNA polymerase subunit beta OS=Anaplasma marginale
(strain St. Maries) GN=rpoB PE=3 SV=1
Length = 1382
Score = 33.1 bits (74), Expect = 4.7, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 14/73 (19%)
Query: 223 ELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRH--------IL 274
E H+KF Q V++L +P +L ++KV +HN+ +M RH I+
Sbjct: 1056 EAHRKFEQKVDKLNYGYDLPQGVLTIVKVFVAVKHNLQP---GDKMAGRHGNKGVISRIV 1112
Query: 275 PKEDDRKWPHARD 287
P ED PH D
Sbjct: 1113 PAED---MPHLED 1122
>sp|Q8KWX4|RPOB_ANAMF DNA-directed RNA polymerase subunit beta OS=Anaplasma marginale
(strain Florida) GN=rpoB PE=3 SV=2
Length = 1382
Score = 33.1 bits (74), Expect = 4.7, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 14/73 (19%)
Query: 223 ELHKKFVQAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRH--------IL 274
E H+KF Q V++L +P +L ++KV +HN+ +M RH I+
Sbjct: 1056 EAHRKFEQKVDKLNYGYDLPQGVLTIVKVFVAVKHNLQP---GDKMAGRHGNKGVISRIV 1112
Query: 275 PKEDDRKWPHARD 287
P ED PH D
Sbjct: 1113 PAED---MPHLED 1122
>sp|P32057|WCAI_ECOLI Putative colanic acid biosynthesis glycosyl transferase WcaI
OS=Escherichia coli (strain K12) GN=wcaI PE=4 SV=1
Length = 407
Score = 32.7 bits (73), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Query: 320 WGAPSNHLAAVQMWAPPGYPPWQQAE---SWNWKPYPGMPADAWGCPV 364
W A H V + APP YP WQ E +W +K G A W CP+
Sbjct: 27 WLAAQGHEVRV-ITAPPYYPQWQVGENYSAWRYKREEG-AATVWRCPL 72
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.131 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 193,937,393
Number of Sequences: 539616
Number of extensions: 9152167
Number of successful extensions: 18870
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 18733
Number of HSP's gapped (non-prelim): 173
length of query: 457
length of database: 191,569,459
effective HSP length: 121
effective length of query: 336
effective length of database: 126,275,923
effective search space: 42428710128
effective search space used: 42428710128
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)