Query 012757
Match_columns 457
No_of_seqs 324 out of 2127
Neff 7.0
Searched_HMMs 13730
Date Mon Mar 25 15:39:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012757.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/012757hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2axtl1 f.23.31.1 (L:1-37) Pho 8.4 2E+02 0.014 17.0 3.4 27 198-224 7-33 (37)
2 d2o1ra1 d.145.1.4 (A:1-78) Hyp 7.1 68 0.0049 22.3 1.1 24 128-151 17-48 (78)
3 d2rk5a1 d.145.1.4 (A:5-88) Put 6.9 67 0.0049 22.5 0.9 24 128-151 17-48 (84)
4 d2r6gf1 e.70.1.1 (F:13-260) Ma 6.9 4.5E+02 0.033 22.1 6.9 35 400-434 35-73 (248)
5 d2oara1 f.16.1.1 (A:10-118) Ga 6.7 43 0.0031 25.4 -0.3 31 349-379 1-37 (109)
6 d2p3ha1 d.145.1.4 (A:5-102) Un 5.2 95 0.0069 22.6 0.9 25 128-152 20-52 (98)
7 d2r2za1 d.145.1.4 (A:5-88) Put 5.1 98 0.0071 21.7 0.9 25 128-152 20-52 (84)
8 d2plia1 d.145.1.4 (A:5-88) Unc 5.1 99 0.0072 21.7 0.9 24 128-151 22-53 (84)
9 d1e8qa_ g.55.1.1 (A:) Cellulos 4.3 81 0.0059 20.1 -0.1 12 7-18 25-36 (46)
10 d1gesa3 d.87.1.1 (A:336-450) G 4.0 3E+02 0.022 19.9 3.2 30 324-355 64-93 (115)
No 1
>d2axtl1 f.23.31.1 (L:1-37) Photosystem II reaction center protein L, PsbL {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=8.38 E-value=2e+02 Score=16.99 Aligned_cols=27 Identities=19% Similarity=0.213 Sum_probs=15.9
Q ss_pred ccccchhhhhhhHHHHHHHHHHHHHHH
Q 012757 198 EQRYDRKQADVNSLLLLLGLLCQMLPL 224 (457)
Q Consensus 198 ~q~~~~~~a~~~~~ll~lav~~lllP~ 224 (457)
+|......++.+..++++-++..++..
T Consensus 7 ~q~veLNrtsLy~GlLlifvl~vLFss 33 (37)
T d2axtl1 7 RQPVELNRTSLYLGLLLILVLALLFSS 33 (37)
T ss_dssp CCCBCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccccchhhHHHHHHHHHHHHHHHHH
Confidence 344444445677777777766655443
No 2
>d2o1ra1 d.145.1.4 (A:1-78) Hypothetical protein HI0107 {Haemophilus influenzae [TaxId: 727]}
Probab=7.12 E-value=68 Score=22.26 Aligned_cols=24 Identities=13% Similarity=0.196 Sum_probs=19.0
Q ss_pred HHHHHHhC--------CcccchhhhhccchHH
Q 012757 128 EQIAYFTG--------PTVGGLMNATCGNATE 151 (457)
Q Consensus 128 e~la~~~G--------~~vggll~a~~gn~pE 151 (457)
+++.+.+| +|+||+++--+|.+||
T Consensus 17 ~dl~~~l~~~l~~~~~~Ti~G~v~~~lg~iP~ 48 (78)
T d2o1ra1 17 RDLNKMFNWELDTEDARTFNGLILEHLEEIPD 48 (78)
T ss_dssp HHHHHHHCCCCCCSSCSBHHHHHHHHCSSCCC
T ss_pred HHHHHHHCCCCCCccchHHHHHHHHHhCcCCC
Confidence 55666666 4899999999998886
No 3
>d2rk5a1 d.145.1.4 (A:5-88) Putative hemolysin SMU1693 {Streptococcus mutans [TaxId: 1309]}
Probab=6.86 E-value=67 Score=22.49 Aligned_cols=24 Identities=13% Similarity=0.263 Sum_probs=18.4
Q ss_pred HHHHHHhC--------CcccchhhhhccchHH
Q 012757 128 EQIAYFTG--------PTVGGLMNATCGNATE 151 (457)
Q Consensus 128 e~la~~~G--------~~vggll~a~~gn~pE 151 (457)
+++.+++| +|+||++.--+|.+|+
T Consensus 17 ~dl~~~l~~~l~~~~~dTlgG~v~~~lg~iP~ 48 (84)
T d2rk5a1 17 NDFNEYFETDLESDNVDTIAGFYLTGVGTIPS 48 (84)
T ss_dssp HHHHHHHTCCCCCTTCCBHHHHHHHHHCSCCC
T ss_pred HHHHHHhCCCcccccchhHHHHHHHHhCcCCC
Confidence 45556665 5899999999998885
No 4
>d2r6gf1 e.70.1.1 (F:13-260) Maltose transport system permease protein MalF {Escherichia coli [TaxId: 562]}
Probab=6.86 E-value=4.5e+02 Score=22.06 Aligned_cols=35 Identities=3% Similarity=-0.007 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHhCCccch----HHHHHHHHHHHHHHHHH
Q 012757 400 AFTIIIVAFTLQDGTSHY----MKGVVLFLCYIAIAACF 434 (457)
Q Consensus 400 ~~svl~~~~~~~~g~~~~----~~G~~Ll~~Y~i~~~~~ 434 (457)
++.+++..+++...|.-. .-|++++.+|.+|-+.+
T Consensus 35 ~~~~~~~~~vy~s~r~~p~kyi~PG~~~l~~Fvi~Pi~y 73 (248)
T d2r6gf1 35 LILSSAGLYIFANRKAYAWRYVYPGMAGMGLFVLFPLVC 73 (248)
T ss_dssp HHHHHHHHHHHSSSCCTTHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHheEEEEEccCccceehhhhHHHHHHHHHHHhhee
Confidence 334444556554444332 46889999999887644
No 5
>d2oara1 f.16.1.1 (A:10-118) Gated mechanosensitive channel {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=6.69 E-value=43 Score=25.45 Aligned_cols=31 Identities=29% Similarity=0.401 Sum_probs=20.6
Q ss_pred HHhCCCcchHHHHhhHHHHHH------HhHHHHHHHH
Q 012757 349 AFKNKLDISLGVALGSATQIS------MFVVPLCVVI 379 (457)
Q Consensus 349 a~~g~~dlaig~~iGS~i~~~------l~vipl~vli 379 (457)
||.|-+|+|+|.++|+....+ -++.|+..++
T Consensus 1 arGNVidLAVgvIiG~AF~~iV~slV~diimPlIg~i 37 (109)
T d2oara1 1 ARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRI 37 (109)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhcchHhhc
Confidence 344556999999999985322 2566766554
No 6
>d2p3ha1 d.145.1.4 (A:5-102) Uncharacterized protein Cgl1194/Cg1349 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=5.21 E-value=95 Score=22.63 Aligned_cols=25 Identities=16% Similarity=0.303 Sum_probs=18.7
Q ss_pred HHHHHHhC--------CcccchhhhhccchHHH
Q 012757 128 EQIAYFTG--------PTVGGLMNATCGNATEL 152 (457)
Q Consensus 128 e~la~~~G--------~~vggll~a~~gn~pEl 152 (457)
+++.+.+| +|+||+++.-+|.+|+-
T Consensus 20 ~dl~~~l~~~l~~~~~~Tl~G~~~~~lg~iP~~ 52 (98)
T d2p3ha1 20 DEVERAIGYELPEGDYETISGLLFDHANALLKT 52 (98)
T ss_dssp HHHHHHHTSCCCCSSCCBHHHHHHHHHCSCCCT
T ss_pred HHHHHHHCCCCCCCCccCHHHHHHHHHCcCCCC
Confidence 44555555 58999999999988863
No 7
>d2r2za1 d.145.1.4 (A:5-88) Putative hemolysin EF0700 {Enterococcus faecalis [TaxId: 1351]}
Probab=5.10 E-value=98 Score=21.67 Aligned_cols=25 Identities=12% Similarity=0.215 Sum_probs=18.3
Q ss_pred HHHHHHhC--------CcccchhhhhccchHHH
Q 012757 128 EQIAYFTG--------PTVGGLMNATCGNATEL 152 (457)
Q Consensus 128 e~la~~~G--------~~vggll~a~~gn~pEl 152 (457)
+++.+++| +|+||+++--+|..|+.
T Consensus 20 ~dl~~~l~~~l~~~~~~TigG~i~~~lg~iP~~ 52 (84)
T d2r2za1 20 DEFNEVFETDLHMSDVDTMAGYLITALGTIPDE 52 (84)
T ss_dssp HHHHHHHTCCCCCTTCCBHHHHHHHHHSSCCCT
T ss_pred HHHHHHHCcCCCCccchhHHHHHHHHhCcCCCC
Confidence 44555555 58999998888888863
No 8
>d2plia1 d.145.1.4 (A:5-88) Uncharacterized protein NMB0537 {Neisseria meningitidis [TaxId: 487]}
Probab=5.09 E-value=99 Score=21.70 Aligned_cols=24 Identities=38% Similarity=0.578 Sum_probs=18.5
Q ss_pred HHHHHHhC--------CcccchhhhhccchHH
Q 012757 128 EQIAYFTG--------PTVGGLMNATCGNATE 151 (457)
Q Consensus 128 e~la~~~G--------~~vggll~a~~gn~pE 151 (457)
+++.+.+| +|+||+++--+|.+|+
T Consensus 22 ~dl~~~~~~~l~~~~~~TigG~i~~~l~~iP~ 53 (84)
T d2plia1 22 EDINTFFGTEYSSEEADTIGGLVIQELGHLPV 53 (84)
T ss_dssp HHHHHHHCCCCCCSSCCBHHHHHHHHHSSCCC
T ss_pred HHHHHHhCCCCCccccHHHHHHHHHHhCcccc
Confidence 45666666 4899999988888885
No 9
>d1e8qa_ g.55.1.1 (A:) Cellulose docking domain, dockering {Piromyces equi [TaxId: 99929]}
Probab=4.28 E-value=81 Score=20.06 Aligned_cols=12 Identities=33% Similarity=0.833 Sum_probs=9.2
Q ss_pred ccccccccccCC
Q 012757 7 DSQEVWELENGG 18 (457)
Q Consensus 7 ~~~~~~~~~~~~ 18 (457)
|..-.|.+|||+
T Consensus 25 D~dG~WGVENg~ 36 (46)
T d1e8qa_ 25 DASGQWGVQNGQ 36 (46)
T ss_dssp ETTEEEEEETTE
T ss_pred cCCCccccCCCe
Confidence 344579999998
No 10
>d1gesa3 d.87.1.1 (A:336-450) Glutathione reductase {Escherichia coli [TaxId: 562]}
Probab=3.97 E-value=3e+02 Score=19.89 Aligned_cols=30 Identities=13% Similarity=-0.021 Sum_probs=25.1
Q ss_pred CcceeeeeehhccccchhHHHHHHHHHhCCCc
Q 012757 324 SVSFISIILLPIVGNAAEHAGSIIFAFKNKLD 355 (457)
Q Consensus 324 s~~fiGlillai~tslpE~~~ai~aa~~g~~d 355 (457)
+..++|..++ |..+.|++..+..+.+.+..
T Consensus 64 ~~~IlGa~iv--G~~A~ElI~~~~~ai~~~~t 93 (115)
T d1gesa3 64 EEKIVGIHGI--GFGMDEMLQGFAVALKMGAT 93 (115)
T ss_dssp TTEEEEEEEE--STTHHHHHHHHHHHHHTTCB
T ss_pred CcEEEEEEEE--CCCHHHHHHHHHHHHHcCCc
Confidence 4568898875 78999999999999988764
Done!