BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012762
(457 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 169/389 (43%), Gaps = 85/389 (21%)
Query: 64 KEATSEGXXXXXXXP--LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDK 121
KE++ EG L + + F+ LG G G V L ++K G +A KV+ K
Sbjct: 3 KESSKEGNGIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKE----TGDLYAVKVLKK 58
Query: 122 RELVSRNKESRARIEREILEML-DHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQ 180
++ + E+ IL + +HPFL L+ P + EF GGDL + Q
Sbjct: 59 DVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQ 116
Query: 181 PDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDN 240
+RF E+ RFYA+E++ AL FLH GIIYRDLK +NVL+ +GH L DF + +G
Sbjct: 117 KSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG-- 174
Query: 241 STSTAQLVSDQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGN 300
I N + A C
Sbjct: 175 ------------------------------------ICNGVTTATFC------------- 185
Query: 301 PGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKG 360
GTP+ +A PEI+ +G AVDWW +G+ ++E+ G PF+
Sbjct: 186 -GTPDYIA------------------PEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA 226
Query: 361 IDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS--KMGATAIKRHQFF 418
+ + ++ + +P + A ++ + K+PT R+GS + G AI RH FF
Sbjct: 227 ENEDDLFEAILNDEVVYPT--WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFF 284
Query: 419 NGVNWALL--RCAKPPFIPRPVTCRDLTT 445
++WA L R +PPF PR + D++
Sbjct: 285 KEIDWAQLNHRQIEPPFRPRIKSREDVSN 313
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 171/380 (45%), Gaps = 86/380 (22%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
D + +G G G V +V++K N +A K+++K E++ R + + R ER++L
Sbjct: 75 DFEIIKVIGRGAFGEVAVVKMK----NTERIYAMKILNKWEMLKRAETACFREERDVLVN 130
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
D ++ L+ L+ ++ GGDL L + DK E RFY E+V+A++
Sbjct: 131 GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAID 189
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPND 262
+H + ++RD+KP+NVL+ +GHI L D
Sbjct: 190 SIHQLHYVHRDIKPDNVLLDVNGHIRLAD------------------------------- 218
Query: 263 CAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTH 322
FG SCL K+ + GT V+S VGT
Sbjct: 219 -------FG--------------SCL--------KMNDDGT---------VQSSVAVGTP 240
Query: 323 EYLAPEIIS----GEG-HGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVV--ARAL 375
+Y++PEI+ G G +G DWW+LG+ ++E+ YG TPF T ++
Sbjct: 241 DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF 300
Query: 376 EFPKEPS-VPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVNWALLRCAKPPFI 434
+FP + V AKDLI Q L+ RR+G G K+H FF G+NW +R + P+I
Sbjct: 301 QFPSHVTDVSEEAKDLI-QRLICSRERRLGQN-GIEDFKKHAFFEGLNWENIRNLEAPYI 358
Query: 435 PRPVTCRDLTTTNSSIDNSI 454
P + D T+N +D+ +
Sbjct: 359 PDVSSPSD--TSNFDVDDDV 376
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 164/391 (41%), Gaps = 94/391 (24%)
Query: 78 PLTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKE-SRARIE 136
PL L D + +G G V LV+LK +A KV+ K+ELV+ +++ + E
Sbjct: 5 PLGLQDFDLLRVIGRGSYAKVLLVRLKKTDR----IYAMKVV-KKELVNDDEDIDWVQTE 59
Query: 137 REILEML-DHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYAS 195
+ + E +HPFL L++ + E+ GGDL QRQ ++ E RFY++
Sbjct: 60 KHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSA 117
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPT 255
E+ +AL +LH GIIYRDLK +NVL+ S+GHI LTD+ + +G
Sbjct: 118 EISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG----------------- 160
Query: 256 GDQQPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRS 315
+P D + C PN I P +
Sbjct: 161 --LRPGDTT-------SXFCGTPNYIAPEI------------------------------ 181
Query: 316 MSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGID---------HELT 366
+ GE +G +VDWW LG+ +FE+ G +PF + +
Sbjct: 182 --------------LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 227
Query: 367 LANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS--KMGATAIKRHQFFNGVNWA 424
++ + + P+ SV A ++ L KDP R+G + G I+ H FF V+W
Sbjct: 228 FQVILEKQIRIPRSLSV--KAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWD 285
Query: 425 LLRCAK--PPFIPRPVTCRDLTTTNSSIDNS 453
++ + PPF P L +S N
Sbjct: 286 MMEQKQVVPPFKPNISGEFGLDNFDSQFTNE 316
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 163/387 (42%), Gaps = 94/387 (24%)
Query: 64 KEATSEGXXXXXXXPLTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRE 123
KEA + L L D + +G G V LV+LK +A KV+ K+E
Sbjct: 2 KEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDR----IYAMKVV-KKE 56
Query: 124 LVSRNKE-SRARIEREILEML-DHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQP 181
LV+ +++ + E+ + E +HPFL L++ + E+ GGDL QRQ
Sbjct: 57 LVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ- 115
Query: 182 DKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNS 241
++ E RFY++E+ +AL +LH GIIYRDLK +NVL+ S+GHI LTD+ + +G
Sbjct: 116 -RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG--- 171
Query: 242 TSTAQLVSDQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNP 301
+P D + C PN I P +
Sbjct: 172 ----------------LRPGDTT-------SXFCGTPNYIAPEI---------------- 192
Query: 302 GTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGI 361
+ GE +G +VDWW LG+ +FE+ G +PF +
Sbjct: 193 ----------------------------LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 224
Query: 362 D---------HELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS--KMGAT 410
+ ++ + + P+ SV A ++ L KDP R+G + G
Sbjct: 225 GSSDNPDQNTEDYLFQVILEKQIRIPRSMSV--KAASVLKSFLNKDPKERLGCLPQTGFA 282
Query: 411 AIKRHQFFNGVNWALLRCAK--PPFIP 435
I+ H FF V+W ++ + PPF P
Sbjct: 283 DIQGHPFFRNVDWDMMEQKQVVPPFKP 309
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 164/387 (42%), Gaps = 94/387 (24%)
Query: 64 KEATSEGXXXXXXXPLTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRE 123
KEA + L L D + +G G V LV+LK +A +V+ K+E
Sbjct: 34 KEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDR----IYAMRVV-KKE 88
Query: 124 LVSRNKE-SRARIEREILEML-DHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQP 181
LV+ +++ + E+ + E +HPFL L++ + E+ GGDL QRQ
Sbjct: 89 LVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ- 147
Query: 182 DKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNS 241
++ E RFY++E+ +AL +LH GIIYRDLK +NVL+ S+GHI LTD+ + +G
Sbjct: 148 -RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG--- 203
Query: 242 TSTAQLVSDQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNP 301
+P D ++ C PN I P +
Sbjct: 204 ----------------LRPGDTT-------STFCGTPNYIAPEI---------------- 224
Query: 302 GTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGI 361
+ GE +G +VDWW LG+ +FE+ G +PF +
Sbjct: 225 ----------------------------LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 256
Query: 362 D---------HELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS--KMGAT 410
+ ++ + + P+ SV A ++ L KDP R+G + G
Sbjct: 257 GSSDNPDQNTEDYLFQVILEKQIRIPRSLSV--KAASVLKSFLNKDPKERLGCHPQTGFA 314
Query: 411 AIKRHQFFNGVNWALLRCAK--PPFIP 435
I+ H FF V+W ++ + PPF P
Sbjct: 315 DIQGHPFFRNVDWDMMEQKQVVPPFKP 341
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 159/372 (42%), Gaps = 94/372 (25%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKE-SRARIER 137
L L D + +G G V LV+LK +A KV+ K+ELV+ +++ + E+
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDR----IYAMKVV-KKELVNDDEDIDWVQTEK 56
Query: 138 EILEML-DHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASE 196
+ E +HPFL L++ + E+ GGDL QRQ ++ E RFY++E
Sbjct: 57 HVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAE 114
Query: 197 VVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTG 256
+ +AL +LH GIIYRDLK +NVL+ S+GHI LTD+ + +G
Sbjct: 115 ISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG------------------ 156
Query: 257 DQQPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSM 316
+P D + C PN I P +
Sbjct: 157 -LRPGDTT-------SXFCGTPNYIAPEI------------------------------- 177
Query: 317 SFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGID---------HELTL 367
+ GE +G +VDWW LG+ +FE+ G +PF + +
Sbjct: 178 -------------LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF 224
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS--KMGATAIKRHQFFNGVNWAL 425
++ + + P+ SV A ++ L KDP R+G + G I+ H FF V+W +
Sbjct: 225 QVILEKQIRIPRSLSV--KAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDM 282
Query: 426 LRCAK--PPFIP 435
+ + PPF P
Sbjct: 283 MEQKQVVPPFKP 294
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 106/193 (54%), Gaps = 7/193 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
+L D + + LG+G G V+L+ +S +NG ++A KV+ K +V + ER +
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLI----RSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLM 59
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L ++ HPF+ ++ T + ++ ++ GG+L L ++ +RF +FYA+EV +
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCL 117
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQ-SPPTGDQ 258
ALE+LH IIYRDLKPEN+L+ +GHI +TDF + + T D +P
Sbjct: 118 ALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVST 177
Query: 259 QPNDCAVDQPPFG 271
+P + ++D FG
Sbjct: 178 KPYNKSIDWWSFG 190
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 68/119 (57%), Gaps = 5/119 (4%)
Query: 320 GTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPK 379
GT +Y+APE++S + + ++DWW+ GI I+E+ G TPF + T ++ L FP
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP- 223
Query: 380 EPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL--RCAKPPFIP 435
P KDL+++L+ +D ++R+G+ + G +K H +F V W L R + P+ P
Sbjct: 224 -PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEP 281
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 107/190 (56%), Gaps = 11/190 (5%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL- 140
SD F+ +G G G V L + K++ F+A KV+ K+ ++ + +E ER +L
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEE----VFYAVKVLQKKAILKKKEEKHIMSERNVLL 93
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ + HPFL L+ + + ++ GG+L QR+ + F E RFYA+E+ A
Sbjct: 94 KNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASA 151
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDL---SLKGDNSTSTAQLVSDQ-SPPTG 256
L +LH + I+YRDLKPEN+L+ S GHI+LTDF L +++ +++TST + +P
Sbjct: 152 LGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVL 211
Query: 257 DQQPNDCAVD 266
+QP D VD
Sbjct: 212 HKQPYDRTVD 221
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 317 SFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALE 376
+F GT EYLAPE++ + + VDWW LG ++E+ YG PF + N++ + L+
Sbjct: 198 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQ 257
Query: 377 FPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVNWALLRCAK--PPFI 434
+P++ A+ L+ LL KD T+R+G+K IK H FF+ +NW L K PPF
Sbjct: 258 L--KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPFN 315
Query: 435 PRPVTCRDL 443
P DL
Sbjct: 316 PNVSGPNDL 324
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 104/194 (53%), Gaps = 8/194 (4%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
S + LG G G V+LV+ K S+ +A KV+ K L R++ R ++ER+IL
Sbjct: 24 SQFELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRDR-VRTKMERDILV 81
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
++HPF+ L+ L+ +F GGDL + + F E V+FY +E+ +AL
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ----LVSDQSPPTGD 257
+ LH +GIIYRDLKPEN+L+ +GHI LTDF LS + + A V +P +
Sbjct: 140 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 258 QQPNDCAVDQPPFG 271
++ + + D FG
Sbjct: 200 RRGHTQSADWWSFG 213
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 104/194 (53%), Gaps = 8/194 (4%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
S + LG G G V+LV+ K S+ +A KV+ K L R++ R ++ER+IL
Sbjct: 24 SQFELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRDR-VRTKMERDILV 81
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
++HPF+ L+ L+ +F GGDL + + F E V+FY +E+ +AL
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ----LVSDQSPPTGD 257
+ LH +GIIYRDLKPEN+L+ +GHI LTDF LS + + A V +P +
Sbjct: 140 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 258 QQPNDCAVDQPPFG 271
++ + + D FG
Sbjct: 200 RRGHTQSADWWSFG 213
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 104/194 (53%), Gaps = 8/194 (4%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
S + LG G G V+LV+ K S+ +A KV+ K L R++ R ++ER+IL
Sbjct: 25 SQFELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRDR-VRTKMERDILV 82
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
++HPF+ L+ L+ +F GGDL + + F E V+FY +E+ +AL
Sbjct: 83 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALAL 140
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ----LVSDQSPPTGD 257
+ LH +GIIYRDLKPEN+L+ +GHI LTDF LS + + A V +P +
Sbjct: 141 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 200
Query: 258 QQPNDCAVDQPPFG 271
++ + + D FG
Sbjct: 201 RRGHTQSADWWSFG 214
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 104/194 (53%), Gaps = 8/194 (4%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
S + LG G G V+LV+ K ++G +A KV+ K L R++ R ++ER+IL
Sbjct: 28 SHFELLKVLGQGSFGKVFLVR-KVTRPDSGHLYAMKVLKKATLKVRDR-VRTKMERDILA 85
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
++HPF+ L+ L+ +F GGDL + + F E V+FY +E+ + L
Sbjct: 86 DVNHPFVVKLHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAELALGL 143
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ----LVSDQSPPTGD 257
+ LH +GIIYRDLKPEN+L+ +GHI LTDF LS + + A V +P +
Sbjct: 144 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVN 203
Query: 258 QQPNDCAVDQPPFG 271
+Q + + D +G
Sbjct: 204 RQGHSHSADWWSYG 217
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 94/158 (59%), Gaps = 7/158 (4%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESR-ARIEREI 139
+ + + LG+G G V+LV+ K + G +A KV+ K +V + K + R ER++
Sbjct: 53 IENFELLKVLGTGAYGKVFLVR-KISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQV 111
Query: 140 LEMLDH-PFLPTLYATLDCPRWSCLLTEFCPGGDLHV-LRQRQPDKRFHESAVRFYASEV 197
LE + PFL TL+ L+ ++ GG+L L QR+ RF E V+ Y E+
Sbjct: 112 LEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEI 168
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
V+ALE LH +GIIYRD+K EN+L+ S+GH++LTDF LS
Sbjct: 169 VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS 206
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 86/152 (56%), Gaps = 10/152 (6%)
Query: 303 TPEIVAEPLDVRSMSFVGTHEYLAPEIISG--EGHGNAVDWWTLGIFIFELFYGTTPFKG 360
+ E VA+ + R+ F GT EY+AP+I+ G GH AVDWW+LG+ ++EL G +PF
Sbjct: 206 SKEFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTV 264
Query: 361 IDHELTLANVVARALE----FPKEPSVPGPAKDLIAQLLVKDPTRRMG-SKMGATAIKRH 415
+ + A + R L+ +P+E S AKDLI +LL+KDP +R+G A IK H
Sbjct: 265 DGEKNSQAEISRRILKSEPPYPQEMS--ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322
Query: 416 QFFNGVNWALLRCAKPPFIPRPVTCRDLTTTN 447
FF +NW L K P +PV +L +N
Sbjct: 323 LFFQKINWDDLAAKKVPAPFKPVIRDELDVSN 354
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 96/170 (56%), Gaps = 10/170 (5%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
+T++D ++ LG G G V LV+ K+ G ++A K++ K ++++++ + E
Sbjct: 5 VTMNDFDYLKLLGKGTFGKVILVREKA----TGRYYAMKILRKEVIIAKDEVAHTVTESR 60
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYASE 196
+L+ HPFL L C + E+ GG+L H+ R+R F E RFY +E
Sbjct: 61 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAE 116
Query: 197 VVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
+V ALE+LH ++YRD+K EN+++ DGHI +TDF L +G + +T +
Sbjct: 117 IVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 166
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
Query: 317 SFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALE 376
+F GT EYLAPE++ +G AVDWW LG+ ++E+ G PF DHE ++ +
Sbjct: 167 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 226
Query: 377 FPKEPSVPGPAKDLIAQLLVKDPTRRMGSK-MGATAIKRHQFFNGVNWALLRCAK--PPF 433
FP+ ++ AK L+A LL KDP +R+G A + H+FF +NW + K PPF
Sbjct: 227 FPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPF 284
Query: 434 IPR 436
P+
Sbjct: 285 KPQ 287
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 96/170 (56%), Gaps = 10/170 (5%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
+T++D ++ LG G G V LV+ K+ G ++A K++ K ++++++ + E
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKA----TGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYASE 196
+L+ HPFL L C + E+ GG+L H+ R+R F E RFY +E
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAE 113
Query: 197 VVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
+V ALE+LH ++YRD+K EN+++ DGHI +TDF L +G + +T +
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 163
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
Query: 317 SFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALE 376
+F GT EYLAPE++ +G AVDWW LG+ ++E+ G PF DHE ++ +
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
Query: 377 FPKEPSVPGPAKDLIAQLLVKDPTRRMGSK-MGATAIKRHQFFNGVNWALLRCAK--PPF 433
FP+ ++ AK L+A LL KDP +R+G A + H+FF +NW + K PPF
Sbjct: 224 FPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPF 281
Query: 434 IPR 436
P+
Sbjct: 282 KPQ 284
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 96/170 (56%), Gaps = 10/170 (5%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
+T++D ++ LG G G V LV+ K+ G ++A K++ K ++++++ + E
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKA----TGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYASE 196
+L+ HPFL L C + E+ GG+L H+ R+R F E RFY +E
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAE 113
Query: 197 VVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
+V ALE+LH ++YRD+K EN+++ DGHI +TDF L +G + +T +
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 163
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
F GT EYLAPE++ +G AVDWW LG+ ++E+ G PF DHE ++ + F
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 378 PKEPSVPGPAKDLIAQLLVKDPTRRMGSK-MGATAIKRHQFFNGVNWALLRCAK--PPFI 434
P+ ++ AK L+A LL KDP +R+G A + H+FF +NW + K PPF
Sbjct: 225 PR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFK 282
Query: 435 PR 436
P+
Sbjct: 283 PQ 284
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 96/170 (56%), Gaps = 10/170 (5%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
+T++D ++ LG G G V LV+ K+ G ++A K++ K ++++++ + E
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKA----TGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYASE 196
+L+ HPFL L C + E+ GG+L H+ R+R F E RFY +E
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAE 113
Query: 197 VVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
+V ALE+LH ++YRD+K EN+++ DGHI +TDF L +G + +T +
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 163
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
Query: 317 SFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALE 376
+F GT EYLAPE++ +G AVDWW LG+ ++E+ G PF DHE ++ +
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
Query: 377 FPKEPSVPGPAKDLIAQLLVKDPTRRMGSK-MGATAIKRHQFFNGVNWALLRCAK--PPF 433
FP+ ++ AK L+A LL KDP +R+G A + H+FF +NW + K PPF
Sbjct: 224 FPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPF 281
Query: 434 IPR 436
P+
Sbjct: 282 KPQ 284
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 96/170 (56%), Gaps = 10/170 (5%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
+T++D ++ LG G G V LV+ K+ G ++A K++ K ++++++ + E
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKA----TGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYASE 196
+L+ HPFL L C + E+ GG+L H+ R+R F E RFY +E
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAE 113
Query: 197 VVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
+V ALE+LH ++YRD+K EN+++ DGHI +TDF L +G + +T +
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 163
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
F GT EYLAPE++ +G AVDWW LG+ ++E+ G PF DHE ++ + F
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 378 PKEPSVPGPAKDLIAQLLVKDPTRRMGSK-MGATAIKRHQFFNGVNWALLRCAK--PPFI 434
P+ ++ AK L+A LL KDP +R+G A + H+FF +NW + K PPF
Sbjct: 225 PR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFK 282
Query: 435 PR 436
P+
Sbjct: 283 PQ 284
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 96/170 (56%), Gaps = 10/170 (5%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
+T++D ++ LG G G V LV+ K+ G ++A K++ K ++++++ + E
Sbjct: 7 VTMNDFDYLKLLGKGTFGKVILVREKA----TGRYYAMKILRKEVIIAKDEVAHTVTESR 62
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYASE 196
+L+ HPFL L C + E+ GG+L H+ R+R F E RFY +E
Sbjct: 63 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAE 118
Query: 197 VVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
+V ALE+LH ++YRD+K EN+++ DGHI +TDF L +G + +T +
Sbjct: 119 IVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 168
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
F GT EYLAPE++ +G AVDWW LG+ ++E+ G PF DHE ++ + F
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 229
Query: 378 PKEPSVPGPAKDLIAQLLVKDPTRRMGSK-MGATAIKRHQFFNGVNWALLRCAK--PPFI 434
P+ ++ AK L+A LL KDP +R+G A + H+FF +NW + K PPF
Sbjct: 230 PR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFK 287
Query: 435 PR 436
P+
Sbjct: 288 PQ 289
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 96/170 (56%), Gaps = 10/170 (5%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
+T++D ++ LG G G V LV+ K+ G ++A K++ K ++++++ + E
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKA----TGRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYASE 196
+L+ HPFL L C + E+ GG+L H+ R+R F E RFY +E
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV----FTEERARFYGAE 113
Query: 197 VVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
+V ALE+LH ++YRD+K EN+++ DGHI +TDF L +G + +T +
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 163
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
F GT EYLAPE++ +G AVDWW LG+ ++E+ G PF DHE ++ + F
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF 224
Query: 378 PKEPSVPGPAKDLIAQLLVKDPTRRMGSK-MGATAIKRHQFFNGVNWALLRCAK--PPFI 434
P+ ++ AK L+A LL KDP +R+G A + H+FF +NW + K PPF
Sbjct: 225 PR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFK 282
Query: 435 PR 436
P+
Sbjct: 283 PQ 284
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 102/221 (46%), Gaps = 28/221 (12%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
D +F LG G +V L + + S +A K+++KR ++ NK ER+++
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSRE----YAIKILEKRHIIKENKVPYVTRERDVMSR 88
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
LDHPF LY T + G+L L+ + F E+ RFY +E+V ALE
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS---------LKGDNSTSTAQLVS---- 249
+LH GII+RDLKPEN+L+ D HI +TDF + + + TAQ VS
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 250 --DQSPPTGDQQPNDCAVDQ-----PPF--GNSSCIIPNCI 281
+ + D C + Q PPF GN I I
Sbjct: 207 TEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKII 247
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 5/134 (3%)
Query: 302 GTPEIVA-EPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKG 360
GT ++++ E R+ FVGT +Y++PE+++ + + D W LG I++L G PF+
Sbjct: 177 GTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRA 236
Query: 361 IDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSK--MGATAIKRHQFF 418
+ L A ++ +FP E P A+DL+ +LLV D T+R+G + G +K H FF
Sbjct: 237 GNEGLIFAKIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
Query: 419 NGVNWALLRCAKPP 432
V W L PP
Sbjct: 295 ESVTWENLHQQTPP 308
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 102/221 (46%), Gaps = 28/221 (12%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
D +F LG G +V L + + S +A K+++KR ++ NK ER+++
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSRE----YAIKILEKRHIIKENKVPYVTRERDVMSR 88
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
LDHPF LY T + G+L L+ + F E+ RFY +E+V ALE
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS---------LKGDNSTSTAQLVS---- 249
+LH GII+RDLKPEN+L+ D HI +TDF + + + TAQ VS
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 250 --DQSPPTGDQQPNDCAVDQ-----PPF--GNSSCIIPNCI 281
+ + D C + Q PPF GN I I
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKII 247
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 5/134 (3%)
Query: 302 GTPEIVA-EPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKG 360
GT ++++ E R+ FVGT +Y++PE+++ + + D W LG I++L G PF+
Sbjct: 177 GTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
Query: 361 IDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSK--MGATAIKRHQFF 418
+ L A ++ +FP E P A+DL+ +LLV D T+R+G + G +K H FF
Sbjct: 237 GNEGLIFAKIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
Query: 419 NGVNWALLRCAKPP 432
V W L PP
Sbjct: 295 ESVTWENLHQQTPP 308
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
D +F LG G +V L + + S +A K+++KR ++ NK ER+++
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSRE----YAIKILEKRHIIKENKVPYVTRERDVMSR 85
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
LDHPF LY T + G+L L+ + F E+ RFY +E+V ALE
Sbjct: 86 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALE 143
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS---------LKGDNSTSTAQLVS---- 249
+LH GII+RDLKPEN+L+ D HI +TDF + + ++ TAQ VS
Sbjct: 144 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 203
Query: 250 --DQSPPTGDQQPNDCAVDQ-----PPF--GNSSCIIPNCI 281
+ + D C + Q PPF GN I I
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 244
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 297 KLGNPGTPEIVA-EPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGT 355
++ + GT ++++ E R+ SFVGT +Y++PE+++ + + D W LG I++L G
Sbjct: 169 QITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 228
Query: 356 TPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSK--MGATAIK 413
PF+ + L ++ +FP E P A+DL+ +LLV D T+R+G + G +K
Sbjct: 229 PPFRAGNEYLIFQKIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLK 286
Query: 414 RHQFFNGVNWALLRCAKPP 432
H FF V W L PP
Sbjct: 287 AHPFFESVTWENLHQQTPP 305
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
D +F LG G +V L + + S +A K+++KR ++ NK ER+++
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSRE----YAIKILEKRHIIKENKVPYVTRERDVMSR 89
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
LDHPF LY T + G+L L+ + F E+ RFY +E+V ALE
Sbjct: 90 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALE 147
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS---------LKGDNSTSTAQLVSDQ-- 251
+LH GII+RDLKPEN+L+ D HI +TDF + + ++ TAQ VS +
Sbjct: 148 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 207
Query: 252 ----SPPTGDQQPNDCAVDQ-----PPF--GNSSCIIPNCI 281
+ + D C + Q PPF GN I I
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 248
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 5/134 (3%)
Query: 302 GTPEIVA-EPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKG 360
GT ++++ E R+ SFVGT +Y++PE+++ + + D W LG I++L G PF+
Sbjct: 178 GTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 237
Query: 361 IDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSK--MGATAIKRHQFF 418
+ L ++ +FP E P A+DL+ +LLV D T+R+G + G +K H FF
Sbjct: 238 GNEYLIFQKIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 295
Query: 419 NGVNWALLRCAKPP 432
V W L PP
Sbjct: 296 ESVTWENLHQQTPP 309
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 102/221 (46%), Gaps = 28/221 (12%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
D +F LG G +V L + + S +A K+++KR ++ NK ER+++
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSRE----YAIKILEKRHIIKENKVPYVTRERDVMSR 85
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
LDHPF LY T + G+L L+ + F E+ RFY +E+V ALE
Sbjct: 86 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALE 143
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS---------LKGDNSTSTAQLVS---- 249
+LH GII+RDLKPEN+L+ D HI +TDF + + + TAQ VS
Sbjct: 144 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 203
Query: 250 --DQSPPTGDQQPNDCAVDQ-----PPF--GNSSCIIPNCI 281
+ + D C + Q PPF GN I I
Sbjct: 204 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 244
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 297 KLGNPGTPEIVA-EPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGT 355
++ + GT ++++ E R+ FVGT +Y++PE+++ + + D W LG I++L G
Sbjct: 169 QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 228
Query: 356 TPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSK--MGATAIK 413
PF+ + L ++ +FP E P A+DL+ +LLV D T+R+G + G +K
Sbjct: 229 PPFRAGNEYLIFQKIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLK 286
Query: 414 RHQFFNGVNWALLRCAKPP 432
H FF V W L PP
Sbjct: 287 AHPFFESVTWENLHQQTPP 305
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 102/221 (46%), Gaps = 28/221 (12%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
D +F LG G +V L + + S +A K+++KR ++ NK ER+++
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSRE----YAIKILEKRHIIKENKVPYVTRERDVMSR 86
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
LDHPF LY T + G+L L+ + F E+ RFY +E+V ALE
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALE 144
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS---------LKGDNSTSTAQLVS---- 249
+LH GII+RDLKPEN+L+ D HI +TDF + + + TAQ VS
Sbjct: 145 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 250 --DQSPPTGDQQPNDCAVDQ-----PPF--GNSSCIIPNCI 281
+ + D C + Q PPF GN I I
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 245
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Query: 302 GTPEIVA-EPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKG 360
GT ++++ E R+ FVGT +Y++PE+++ + + D W LG I++L G PF+
Sbjct: 175 GTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
Query: 361 IDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSK--MGATAIKRHQFF 418
+ L ++ +FP E P A+DL+ +LLV D T+R+G + G +K H FF
Sbjct: 235 GNEYLIFQKIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292
Query: 419 NGVNWALLRCAKPP 432
V W L PP
Sbjct: 293 ESVTWENLHQQTPP 306
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 102/221 (46%), Gaps = 28/221 (12%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
D +F LG G +V L + + S +A K+++KR ++ NK ER+++
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSRE----YAIKILEKRHIIKENKVPYVTRERDVMSR 88
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
LDHPF LY T + G+L L+ + F E+ RFY +E+V ALE
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS---------LKGDNSTSTAQLVS---- 249
+LH GII+RDLKPEN+L+ D HI +TDF + + + TAQ VS
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 250 --DQSPPTGDQQPNDCAVDQ-----PPF--GNSSCIIPNCI 281
+ + D C + Q PPF GN I I
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 247
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Query: 302 GTPEIVA-EPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKG 360
GT ++++ E R+ FVGT +Y++PE+++ + + D W LG I++L G PF+
Sbjct: 177 GTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
Query: 361 IDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSK--MGATAIKRHQFF 418
+ L ++ +FP E P A+DL+ +LLV D T+R+G + G +K H FF
Sbjct: 237 GNEYLIFQKIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
Query: 419 NGVNWALLRCAKPP 432
V W L PP
Sbjct: 295 ESVTWENLHQQTPP 308
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
D +F LG G +V L + + S +A K+++KR ++ NK ER+++
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSRE----YAIKILEKRHIIKENKVPYVTRERDVMSR 91
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
LDHPF LY T + G+L L+ + F E+ RFY +E+V ALE
Sbjct: 92 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALE 149
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS---------LKGDNSTSTAQLVSDQ-- 251
+LH GII+RDLKPEN+L+ D HI +TDF + + + TAQ VS +
Sbjct: 150 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 209
Query: 252 ----SPPTGDQQPNDCAVDQ-----PPF--GNSSCIIPNCI 281
+ + D C + Q PPF GN I I
Sbjct: 210 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 250
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 5/134 (3%)
Query: 302 GTPEIVA-EPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKG 360
GT ++++ E R+ FVGT +Y++PE+++ + + D W LG I++L G PF+
Sbjct: 180 GTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 239
Query: 361 IDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSK--MGATAIKRHQFF 418
+ L ++ +FP + A+DL+ +LLV D T+R+G + G +K H FF
Sbjct: 240 GNEYLIFQKIIKLEYDFP--AAFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 297
Query: 419 NGVNWALLRCAKPP 432
V W L PP
Sbjct: 298 ESVTWENLHQQTPP 311
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 102/221 (46%), Gaps = 28/221 (12%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
D +F LG G +V L + + S +A K+++KR ++ NK ER+++
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSRE----YAIKILEKRHIIKENKVPYVTRERDVMSR 88
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
LDHPF LY T + G+L L+ + F E+ RFY +E+V ALE
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS---------LKGDNSTSTAQLVS---- 249
+LH GII+RDLKPEN+L+ D HI +TDF + + + TAQ VS
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 250 --DQSPPTGDQQPNDCAVDQ-----PPF--GNSSCIIPNCI 281
+ + D C + Q PPF GN I I
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 247
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Query: 302 GTPEIVA-EPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKG 360
GT ++++ E R+ FVGT +Y++PE+++ + + D W LG I++L G PF+
Sbjct: 177 GTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
Query: 361 IDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSK--MGATAIKRHQFF 418
+ L ++ +FP E P A+DL+ +LLV D T+R+G + G +K H FF
Sbjct: 237 GNEYLIFQKIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
Query: 419 NGVNWALLRCAKPP 432
V W L PP
Sbjct: 295 ESVTWENLHQQTPP 308
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
D +F LG G +V L + + S +A K+++KR ++ NK ER+++
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSRE----YAIKILEKRHIIKENKVPYVTRERDVMSR 89
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
LDHPF LY T + G+L L+ + F E+ RFY +E+V ALE
Sbjct: 90 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALE 147
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS---------LKGDNSTSTAQLVSDQ-- 251
+LH GII+RDLKPEN+L+ D HI +TDF + + + TAQ VS +
Sbjct: 148 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 207
Query: 252 ----SPPTGDQQPNDCAVDQ-----PPF--GNSSCIIPNCI 281
+ + D C + Q PPF GN I I
Sbjct: 208 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 248
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Query: 302 GTPEIVA-EPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKG 360
GT ++++ E R+ FVGT +Y++PE+++ + + D W LG I++L G PF+
Sbjct: 178 GTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 237
Query: 361 IDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSK--MGATAIKRHQFF 418
+ L ++ +FP E P A+DL+ +LLV D T+R+G + G +K H FF
Sbjct: 238 GNEYLIFQKIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 295
Query: 419 NGVNWALLRCAKPP 432
V W L PP
Sbjct: 296 ESVTWENLHQQTPP 309
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 102/221 (46%), Gaps = 28/221 (12%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
D +F LG G +V L + + S +A K+++KR ++ NK ER+++
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSRE----YAIKILEKRHIIKENKVPYVTRERDVMSR 70
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
LDHPF LY T + G+L L+ + F E+ RFY +E+V ALE
Sbjct: 71 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALE 128
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS---------LKGDNSTSTAQLVS---- 249
+LH GII+RDLKPEN+L+ D HI +TDF + + + TAQ VS
Sbjct: 129 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 188
Query: 250 --DQSPPTGDQQPNDCAVDQ-----PPF--GNSSCIIPNCI 281
+ + D C + Q PPF GN I I
Sbjct: 189 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 229
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 297 KLGNPGTPEIVA-EPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGT 355
++ + GT ++++ E R+ FVGT +Y++PE+++ + + D W LG I++L G
Sbjct: 154 QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 213
Query: 356 TPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSK--MGATAIK 413
PF+ + L ++ +FP E P A+DL+ +LLV D T+R+G + G +K
Sbjct: 214 PPFRAGNEYLIFQKIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLK 271
Query: 414 RHQFFNGVNWALLRCAKPP 432
H FF V W L PP
Sbjct: 272 AHPFFESVTWENLHQQTPP 290
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 102/221 (46%), Gaps = 28/221 (12%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
D +F LG G +V L + + S +A K+++KR ++ NK ER+++
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSRE----YAIKILEKRHIIKENKVPYVTRERDVMSR 86
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
LDHPF LY T + G+L L+ + F E+ RFY +E+V ALE
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALE 144
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS---------LKGDNSTSTAQLVS---- 249
+LH GII+RDLKPEN+L+ D HI +TDF + + + TAQ VS
Sbjct: 145 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 250 --DQSPPTGDQQPNDCAVDQ-----PPF--GNSSCIIPNCI 281
+ + D C + Q PPF GN I I
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 245
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Query: 302 GTPEIVA-EPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKG 360
GT ++++ E R+ FVGT +Y++PE+++ + + D W LG I++L G PF+
Sbjct: 175 GTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
Query: 361 IDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSK--MGATAIKRHQFF 418
+ L ++ +FP E P A+DL+ +LLV D T+R+G + G +K H FF
Sbjct: 235 GNEYLIFQKIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292
Query: 419 NGVNWALLRCAKPP 432
V W L PP
Sbjct: 293 ESVTWENLHQQTPP 306
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 102/221 (46%), Gaps = 28/221 (12%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
D +F LG G +V L + + S +A K+++KR ++ NK ER+++
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSRE----YAIKILEKRHIIKENKVPYVTRERDVMSR 86
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
LDHPF LY T + G+L L+ + F E+ RFY +E+V ALE
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALE 144
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS---------LKGDNSTSTAQLVS---- 249
+LH GII+RDLKPEN+L+ D HI +TDF + + + TAQ VS
Sbjct: 145 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELL 204
Query: 250 --DQSPPTGDQQPNDCAVDQ-----PPF--GNSSCIIPNCI 281
+ + D C + Q PPF GN I I
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 245
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 5/134 (3%)
Query: 302 GTPEIVA-EPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKG 360
GT ++++ E R+ +FVGT +Y++PE+++ + + D W LG I++L G PF+
Sbjct: 175 GTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
Query: 361 IDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSK--MGATAIKRHQFF 418
+ L ++ +FP E P A+DL+ +LLV D T+R+G + G +K H FF
Sbjct: 235 GNEYLIFQKIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292
Query: 419 NGVNWALLRCAKPP 432
V W L PP
Sbjct: 293 ESVTWENLHQQTPP 306
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
D +F LG G +V L + + S +A K+++KR ++ NK ER+++
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSRE----YAIKILEKRHIIKENKVPYVTRERDVMSR 88
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
LDHPF LY T + G+L L+ + F E+ RFY +E+V ALE
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS---------LKGDNSTSTAQLVSDQ-- 251
+LH GII+RDLKPEN+L+ D HI +TDF + + + TAQ VS +
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 252 ----SPPTGDQQPNDCAVDQ-----PPF--GNSSCIIPNCI 281
+ + D C + Q PPF GN I I
Sbjct: 207 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 247
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Query: 302 GTPEIVA-EPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKG 360
GT ++++ E R+ FVGT +Y++PE+++ + + D W LG I++L G PF+
Sbjct: 177 GTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236
Query: 361 IDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSK--MGATAIKRHQFF 418
+ L ++ +FP E P A+DL+ +LLV D T+R+G + G +K H FF
Sbjct: 237 GNEYLIFQKIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
Query: 419 NGVNWALLRCAKPP 432
V W L PP
Sbjct: 295 ESVTWENLHQQTPP 308
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 102/221 (46%), Gaps = 28/221 (12%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
D +F LG G +V L + + S +A K+++KR ++ NK ER+++
Sbjct: 8 DFKFGKILGEGSFSTVVLARELATSRE----YAIKILEKRHIIKENKVPYVTRERDVMSR 63
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
LDHPF LY T + G+L L+ + F E+ RFY +E+V ALE
Sbjct: 64 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALE 121
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS---------LKGDNSTSTAQLVS---- 249
+LH GII+RDLKPEN+L+ D HI +TDF + + + TAQ VS
Sbjct: 122 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 181
Query: 250 --DQSPPTGDQQPNDCAVDQ-----PPF--GNSSCIIPNCI 281
+ + D C + Q PPF GN I I
Sbjct: 182 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 222
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Query: 302 GTPEIVA-EPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKG 360
GT ++++ E R+ FVGT +Y++PE+++ + + D W LG I++L G PF+
Sbjct: 152 GTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 211
Query: 361 IDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSK--MGATAIKRHQFF 418
+ L ++ +FP E P A+DL+ +LLV D T+R+G + G +K H FF
Sbjct: 212 GNEYLIFQKIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 269
Query: 419 NGVNWALLRCAKPP 432
V W L PP
Sbjct: 270 ESVTWENLHQQTPP 283
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 102/222 (45%), Gaps = 28/222 (12%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
D +F LG G +V L + + S +A K+++KR ++ NK ER+++
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSRE----YAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
LDHPF LY T + G+L L+ + F E+ RFY +E+V AL
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSAL 121
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS---------LKGDNSTSTAQLVS--- 249
E+LH GII+RDLKPEN+L+ D HI +TDF + + + TAQ VS
Sbjct: 122 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 181
Query: 250 ---DQSPPTGDQQPNDCAVDQ-----PPF--GNSSCIIPNCI 281
+ + D C + Q PPF GN I I
Sbjct: 182 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 223
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Query: 302 GTPEIVA-EPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKG 360
GT ++++ E R+ FVGT +Y++PE+++ + + D W LG I++L G PF+
Sbjct: 153 GTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 212
Query: 361 IDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSK--MGATAIKRHQFF 418
+ L ++ +FP E P A+DL+ +LLV D T+R+G + G +K H FF
Sbjct: 213 GNEYLIFQKIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 270
Query: 419 NGVNWALLRCAKPP 432
V W L PP
Sbjct: 271 ESVTWENLHQQTPP 284
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 28/222 (12%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
D +F LG G +V L + + S +A K+++KR ++ NK ER+++
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSRE----YAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
LDHPF LY T + G+L L+ + F E+ RFY +E+V AL
Sbjct: 66 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSAL 123
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS---------LKGDNSTSTAQLVSDQ- 251
E+LH GII+RDLKPEN+L+ D HI +TDF + + + TAQ VS +
Sbjct: 124 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 183
Query: 252 -----SPPTGDQQPNDCAVDQ-----PPF--GNSSCIIPNCI 281
+ + D C + Q PPF GN I I
Sbjct: 184 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 225
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Query: 302 GTPEIVA-EPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKG 360
GT ++++ E R+ FVGT +Y++PE+++ + + D W LG I++L G PF+
Sbjct: 155 GTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 214
Query: 361 IDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSK--MGATAIKRHQFF 418
+ L ++ +FP E P A+DL+ +LLV D T+R+G + G +K H FF
Sbjct: 215 GNEYLIFQKIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 272
Query: 419 NGVNWALLRCAKPP 432
V W L PP
Sbjct: 273 ESVTWENLHQQTPP 286
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 28/222 (12%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
D +F LG G +V L + + S +A K+++KR ++ NK ER+++
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSRE----YAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
LDHPF LY T + G+L L+ + F E+ RFY +E+V AL
Sbjct: 65 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSAL 122
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS---------LKGDNSTSTAQLVSDQ- 251
E+LH GII+RDLKPEN+L+ D HI +TDF + + + TAQ VS +
Sbjct: 123 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 182
Query: 252 -----SPPTGDQQPNDCAVDQ-----PPF--GNSSCIIPNCI 281
+ + D C + Q PPF GN I I
Sbjct: 183 LTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 224
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Query: 302 GTPEIVA-EPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKG 360
GT ++++ E R+ FVGT +Y++PE+++ + + D W LG I++L G PF+
Sbjct: 154 GTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 213
Query: 361 IDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSK--MGATAIKRHQFF 418
+ L ++ +FP E P A+DL+ +LLV D T+R+G + G +K H FF
Sbjct: 214 GNEYLIFQKIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 271
Query: 419 NGVNWALLRCAKPP 432
V W L PP
Sbjct: 272 ESVTWENLHQQTPP 285
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 96/171 (56%), Gaps = 11/171 (6%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
+T+++ ++ LG G G V LV+ K+ G ++A K++ K +V++++ + E
Sbjct: 145 VTMNEFEYLKLLGKGTFGKVILVKEKA----TGRYYAMKILKKEVIVAKDEVAHTLTENR 200
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYASE 196
+L+ HPFL L + C + E+ GG+L H+ R+R F E RFY +E
Sbjct: 201 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV----FSEDRARFYGAE 256
Query: 197 VVVALEFLHM-MGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
+V AL++LH ++YRDLK EN+++ DGHI +TDF L +G +T +
Sbjct: 257 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK 307
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 317 SFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALE 376
+F GT EYLAPE++ +G AVDWW LG+ ++E+ G PF DHE ++ +
Sbjct: 308 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 367
Query: 377 FPKEPSVPGP-AKDLIAQLLVKDPTRRM-GSKMGATAIKRHQFFNGVNWALLRCAK--PP 432
FP+ GP AK L++ LL KDP +R+ G A I +H+FF G+ W + K PP
Sbjct: 368 FPR---TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPP 424
Query: 433 FIPRPVTCRD 442
F P+ + D
Sbjct: 425 FKPQVTSETD 434
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 96/171 (56%), Gaps = 11/171 (6%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
+T+++ ++ LG G G V LV+ K+ G ++A K++ K +V++++ + E
Sbjct: 148 VTMNEFEYLKLLGKGTFGKVILVKEKA----TGRYYAMKILKKEVIVAKDEVAHTLTENR 203
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYASE 196
+L+ HPFL L + C + E+ GG+L H+ R+R F E RFY +E
Sbjct: 204 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV----FSEDRARFYGAE 259
Query: 197 VVVALEFLHM-MGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
+V AL++LH ++YRDLK EN+++ DGHI +TDF L +G +T +
Sbjct: 260 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK 310
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 317 SFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALE 376
+F GT EYLAPE++ +G AVDWW LG+ ++E+ G PF DHE ++ +
Sbjct: 311 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 370
Query: 377 FPKEPSVPGP-AKDLIAQLLVKDPTRRM-GSKMGATAIKRHQFFNGVNWALLRCAK--PP 432
FP+ GP AK L++ LL KDP +R+ G A I +H+FF G+ W + K PP
Sbjct: 371 FPR---TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPP 427
Query: 433 FIPRPVTCRD 442
F P+ + D
Sbjct: 428 FKPQVTSETD 437
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 103/221 (46%), Gaps = 28/221 (12%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
D +F LG G +V L + + S +A K+++KR ++ NK ER+++
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSRE----YAIKILEKRHIIKENKVPYVTRERDVMSR 88
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
LDHPF LY T + G L L+ + F E+ RFY +E+V ALE
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGCL--LKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS---------LKGDNSTSTAQLVSDQ-- 251
+LH GII+RDLKPEN+L+ D HI +TDF + + ++ TAQ VS +
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 206
Query: 252 ----SPPTGDQQPNDCAVDQ-----PPF--GNSSCIIPNCI 281
+ + D C + Q PPF GN I I
Sbjct: 207 TEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 247
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 5/134 (3%)
Query: 302 GTPEIVA-EPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKG 360
GT ++++ E R+ SFVGT +Y++PE+++ + + D W LG I++L G PF+
Sbjct: 177 GTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRA 236
Query: 361 IDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSK--MGATAIKRHQFF 418
+ L ++ +FP E P A+DL+ +LLV D T+R+G + G +K H FF
Sbjct: 237 GNEYLIFQKIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
Query: 419 NGVNWALLRCAKPP 432
V W L PP
Sbjct: 295 ESVTWENLHQQTPP 308
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 96/171 (56%), Gaps = 11/171 (6%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
+T+++ ++ LG G G V LV+ K+ G ++A K++ K +V++++ + E
Sbjct: 6 VTMNEFEYLKLLGKGTFGKVILVKEKA----TGRYYAMKILKKEVIVAKDEVAHTLTENR 61
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYASE 196
+L+ HPFL L + C + E+ GG+L H+ R+R F E RFY +E
Sbjct: 62 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV----FSEDRARFYGAE 117
Query: 197 VVVALEFLHM-MGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
+V AL++LH ++YRDLK EN+++ DGHI +TDF L +G +T +
Sbjct: 118 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK 168
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
F GT EYLAPE++ +G AVDWW LG+ ++E+ G PF DHE ++ + F
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 229
Query: 378 PKEPSVPGP-AKDLIAQLLVKDPTRRM-GSKMGATAIKRHQFFNGVNWALLRCAK--PPF 433
P+ GP AK L++ LL KDP +R+ G A I +H+FF G+ W + K PPF
Sbjct: 230 PR---TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPF 286
Query: 434 IPRPVTCRD 442
P+ + D
Sbjct: 287 KPQVTSETD 295
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 96/171 (56%), Gaps = 11/171 (6%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
+T+++ ++ LG G G V LV+ K+ G ++A K++ K +V++++ + E
Sbjct: 7 VTMNEFEYLKLLGKGTFGKVILVKEKA----TGRYYAMKILKKEVIVAKDEVAHTLTENR 62
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYASE 196
+L+ HPFL L + C + E+ GG+L H+ R+R F E RFY +E
Sbjct: 63 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV----FSEDRARFYGAE 118
Query: 197 VVVALEFLHM-MGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
+V AL++LH ++YRDLK EN+++ DGHI +TDF L +G +T +
Sbjct: 119 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK 169
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
F GT EYLAPE++ +G AVDWW LG+ ++E+ G PF DHE ++ + F
Sbjct: 171 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 230
Query: 378 PKEPSVPGP-AKDLIAQLLVKDPTRRM-GSKMGATAIKRHQFFNGVNWALLRCAK--PPF 433
P+ GP AK L++ LL KDP +R+ G A I +H+FF G+ W + K PPF
Sbjct: 231 PR---TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPF 287
Query: 434 IPRPVTCRD 442
P+ + D
Sbjct: 288 KPQVTSETD 296
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 96/171 (56%), Gaps = 11/171 (6%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
+T+++ ++ LG G G V LV+ K+ G ++A K++ K +V++++ + E
Sbjct: 5 VTMNEFEYLKLLGKGTFGKVILVKEKA----TGRYYAMKILKKEVIVAKDEVAHTLTENR 60
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYASE 196
+L+ HPFL L + C + E+ GG+L H+ R+R F E RFY +E
Sbjct: 61 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV----FSEDRARFYGAE 116
Query: 197 VVVALEFLHM-MGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
+V AL++LH ++YRDLK EN+++ DGHI +TDF L +G +T +
Sbjct: 117 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK 167
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
F GT EYLAPE++ +G AVDWW LG+ ++E+ G PF DHE ++ + F
Sbjct: 169 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 228
Query: 378 PKEPSVPGP-AKDLIAQLLVKDPTRRM-GSKMGATAIKRHQFFNGVNWALLRCAK--PPF 433
P+ GP AK L++ LL KDP +R+ G A I +H+FF G+ W + K PPF
Sbjct: 229 PR---TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPF 285
Query: 434 IPRPVTCRD 442
P+ + D
Sbjct: 286 KPQVTSETD 294
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 101/221 (45%), Gaps = 28/221 (12%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
D +F LG G + L + + S +A K+++KR ++ NK ER+++
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSRE----YAIKILEKRHIIKENKVPYVTRERDVMSR 86
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
LDHPF LY T + G+L L+ + F E+ RFY +E+V ALE
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALE 144
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS---------LKGDNSTSTAQLVS---- 249
+LH GII+RDLKPEN+L+ D HI +TDF + + + TAQ VS
Sbjct: 145 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 250 --DQSPPTGDQQPNDCAVDQ-----PPF--GNSSCIIPNCI 281
+ + D C + Q PPF GN I I
Sbjct: 205 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 245
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Query: 302 GTPEIVA-EPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKG 360
GT ++++ E R+ FVGT +Y++PE+++ + + D W LG I++L G PF+
Sbjct: 175 GTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 234
Query: 361 IDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSK--MGATAIKRHQFF 418
+ L ++ +FP E P A+DL+ +LLV D T+R+G + G +K H FF
Sbjct: 235 GNEYLIFQKIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 292
Query: 419 NGVNWALLRCAKPP 432
V W L PP
Sbjct: 293 ESVTWENLHQQTPP 306
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 102/221 (46%), Gaps = 28/221 (12%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
D +F LG G +V L + + S +A K+++KR ++ NK ER+++
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSRE----YAIKILEKRHIIKENKVPYVTRERDVMSR 93
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
LDHPF LY + G+L L+ + F E+ RFY +E+V ALE
Sbjct: 94 LDHPFFVKLYFCFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALE 151
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS---------LKGDNSTSTAQLVSDQ-- 251
+LH GII+RDLKPEN+L+ D HI +TDF + + + TAQ VS +
Sbjct: 152 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 211
Query: 252 ----SPPTGDQQPNDCAVDQ-----PPF--GNSSCIIPNCI 281
+ + D C + Q PPF GN I I
Sbjct: 212 TEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII 252
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Query: 302 GTPEIVA-EPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKG 360
GT ++++ E R+ FVGT +Y++PE+++ + + D W LG I++L G PF+
Sbjct: 182 GTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 241
Query: 361 IDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSK--MGATAIKRHQFF 418
+ L ++ +FP E P A+DL+ +LLV D T+R+G + G +K H FF
Sbjct: 242 GNEYLIFQKIIKLEYDFP-EKFFP-KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 299
Query: 419 NGVNWALLRCAKPP 432
V W L PP
Sbjct: 300 ESVTWENLHQQTPP 313
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 81/146 (55%), Gaps = 4/146 (2%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKES-RARIEREILEMLDHPFL 148
LG G G V+ V+ K +N G FA KV+ K +V K++ + ER ILE + HPF+
Sbjct: 25 LGKGGYGKVFQVR-KVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 149 PTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMG 208
L L+ E+ GG+L + Q + + F E FY +E+ +AL LH G
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFM--QLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 209 IIYRDLKPENVLVRSDGHIMLTDFDL 234
IIYRDLKPEN+++ GH+ LTDF L
Sbjct: 142 IIYRDLKPENIMLNHQGHVKLTDFGL 167
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 317 SFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALE 376
+F GT EY+APEI+ GH AVDWW+LG ++++ G PF G + + T+ ++ L
Sbjct: 180 TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN 239
Query: 377 FPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMG-ATAIKRHQFFNGVNWA--LLRCAKPPF 433
P P + A+DL+ +LL ++ R+G+ G A ++ H FF +NW L R +PPF
Sbjct: 240 LP--PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPF 297
Query: 434 IPRPVTCRDLTTTNSSI 450
P + D++ +S
Sbjct: 298 KPLLQSEEDVSQFDSKF 314
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 81/146 (55%), Gaps = 4/146 (2%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKES-RARIEREILEMLDHPFL 148
LG G G V+ V+ K +N G FA KV+ K +V K++ + ER ILE + HPF+
Sbjct: 25 LGKGGYGKVFQVR-KVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 149 PTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMG 208
L L+ E+ GG+L + Q + + F E FY +E+ +AL LH G
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFM--QLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 209 IIYRDLKPENVLVRSDGHIMLTDFDL 234
IIYRDLKPEN+++ GH+ LTDF L
Sbjct: 142 IIYRDLKPENIMLNHQGHVKLTDFGL 167
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 76/136 (55%), Gaps = 5/136 (3%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
F GT EY+APEI+ GH AVDWW+LG ++++ G PF G + + T+ ++ L
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL 240
Query: 378 PKEPSVPGPAKDLIAQLLVKDPTRRMGSKMG-ATAIKRHQFFNGVNWA--LLRCAKPPFI 434
P P + A+DL+ +LL ++ R+G+ G A ++ H FF +NW L R +PPF
Sbjct: 241 P--PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFK 298
Query: 435 PRPVTCRDLTTTNSSI 450
P + D++ +S
Sbjct: 299 PLLQSEEDVSQFDSKF 314
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G FA K++DK+++V + E+ IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLV----KHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 96 QAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLT 153
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G FA K++DK+++V + E+ IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLV----KHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 96 QAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLT 153
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G FA K++DK+++V + E+ IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLV----KHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 96 QAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLT 153
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 88/164 (53%), Gaps = 6/164 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 41 LDQFERIKTLGTGSFGRVMLV----KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLT 154
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTST 244
E+LH + +IYRDLKPEN+L+ G+I +TDF + + T T
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT 198
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ + GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 189 AKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 249 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 61 LDQFERIKTLGTGSFGRVMLV----KHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 116
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 117 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLT 174
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 175 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 209
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 209 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 268
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 269 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 326
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 327 YQRKVEAPFIPK 338
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 88/164 (53%), Gaps = 6/164 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 26 LDQFERIKTLGTGSFGRVMLV----KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 81
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 82 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLT 139
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTST 244
E+LH + +IYRDLKPEN+L+ G+I +TDF + + T T
Sbjct: 140 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT 183
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ + GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 174 AKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 233
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 234 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAI 291
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 292 YQRKVEAPFIPK 303
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 41 LDQFERIKTLGTGSFGRVMLV----KHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLT 154
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 249 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 41 LDQFERIKTLGTGSFGRVMLV----KHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLT 154
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 249 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 41 LDQFERIKTLGTGSFGRVMLV----KHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLT 154
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 69/132 (52%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G I H++F +W +
Sbjct: 249 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWFATTDWIAI 306
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLV----KHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRIL 95
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLT 153
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+++ G+I +TDF L+
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLA 188
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELT 366
+A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 367 LANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWAL 425
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W
Sbjct: 247 YEKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 426 L--RCAKPPFIPR 436
+ R + PFIP+
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 33 LDQFERIKTLGTGSFGRVMLV----KHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 88
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 89 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLT 146
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 147 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 181
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 181 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 240
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 241 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 298
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 299 YQRKVEAPFIPK 310
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLV----KHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRIL 95
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLT 153
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+++ G+I +TDF L+
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLA 188
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELT 366
+A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 367 LANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWAL 425
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W
Sbjct: 247 YEKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 426 L--RCAKPPFIPR 436
+ R + PFIP+
Sbjct: 305 IYQRKVEAPFIPK 317
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLV----KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLT 153
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 33 LDQFERIKTLGTGSFGRVMLV----KHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 88
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 89 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLT 146
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 147 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 181
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 181 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 240
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 241 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 298
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 299 YQRKVEAPFIPK 310
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLV----KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLT 153
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLV----KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLT 153
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLV----KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLT 153
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 41 LDQFERIKTLGTGSFGRVMLV----KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLT 154
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 249 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLV----KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLT 153
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 41 LDQFERIKTLGTGSFGRVMLV----KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLT 154
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 249 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 41 LDQFERIKTLGTGSFGRVMLV----KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 97 QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFXEPHARFYAAQIVLT 154
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+++ G+I +TDF +
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA 189
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 249 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 41 LDQFERIKTLGTGSFGRVMLV----KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 97 QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLT 154
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+++ G+I +TDF +
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA 189
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 249 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLV----KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLT 153
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+++ G+I +TDF +
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFA 188
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 88/158 (55%), Gaps = 6/158 (3%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ LG+G G V LV K +G +A K++DK+++V + E+ IL+ ++ P
Sbjct: 67 IKTLGTGSFGRVMLV----KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 122
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
FL L + ++ E+ GG++ +R RF E RFYA+++V+ E+LH
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHS 180
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTST 244
+ +IYRDLKPEN+L+ G+I +TDF + + +T T
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT 218
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 67/125 (53%), Gaps = 5/125 (4%)
Query: 315 SMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARA 374
+ + GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF +V+
Sbjct: 216 TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 275
Query: 375 LEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL--RCAKP 431
+ FP S KDL+ LL D T+R G+ K G IK H++F +W + R +
Sbjct: 276 VRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEA 333
Query: 432 PFIPR 436
PFIP+
Sbjct: 334 PFIPK 338
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 41 LDQFERIKTLGTGSFGRVMLV----KHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLT 154
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+++ G+I +TDF +
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA 189
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 249 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 41 LDQFERIKTLGTGSFGRVMLV----KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 97 QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLT 154
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+++ G+I +TDF +
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA 189
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 249 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLV----KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLT 153
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+++ G+I +TDF +
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA 188
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 85/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLV----KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFXEPHARFYAAQIVLT 153
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+++ G+I +TDF +
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFA 188
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L + D LG G G V+L + K + FFA K + K ++ + +E+
Sbjct: 15 LKIEDFELHKMLGKGSFGKVFLAEFKKTNQ----FFAIKALKKDVVLMDDDVECTMVEKR 70
Query: 139 ILEM-LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
+L + +HPFL ++ T + E+ GGDL + Q +F S FYA+E+
Sbjct: 71 VLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEI 128
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDL---SLKGDNSTSTAQLVSDQ-SP 253
++ L+FLH GI+YRDLK +N+L+ DGHI + DF + ++ GD T+ D +P
Sbjct: 129 ILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAP 188
Query: 254 PTGDQQPNDCAVDQPPFG 271
Q + +VD FG
Sbjct: 189 EILLGQKYNHSVDWWSFG 206
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 77/137 (56%), Gaps = 10/137 (7%)
Query: 312 DVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVV 371
D ++ F GT +Y+APEI+ G+ + ++VDWW+ G+ ++E+ G +PF G D E ++
Sbjct: 173 DAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR 232
Query: 372 ARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVNWALL--RCA 429
+P+ + AKDL+ +L V++P +R+G + I++H F +NW L +
Sbjct: 233 MDNPFYPR--WLEKEAKDLLVKLFVREPEKRLGVR---GDIRQHPLFREINWEELERKEI 287
Query: 430 KPPFIPR---PVTCRDL 443
PPF P+ P C +
Sbjct: 288 DPPFRPKVKSPFDCSNF 304
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 84/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + +G+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 40 LDQFERIKTIGTGSFGRVMLV----KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGGD+ +R RF E RFYA+++V+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIG--RFSEPHARFYAAQIVLT 153
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+L+ G+I + DF +
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA 188
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 84/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + +G+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 40 LDQFERIKTIGTGSFGRVMLV----KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGGD+ +R RF E RFYA+++V+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIG--RFSEPHARFYAAQIVLT 153
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+L+ G+I + DF +
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA 188
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ LG+G G V LV K +G +A K++DK+++V + E+ IL+ ++ P
Sbjct: 46 IKTLGTGSFGRVMLV----KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
FL L + ++ E+ GG++ +R RF E RFYA+++V+ E+LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHS 159
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ LG+G G V LV K +G +A K++DK+++V + E+ IL+ ++ P
Sbjct: 46 IKTLGTGSFGRVMLV----KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
FL L + ++ E+ GG++ +R RF E RFYA+++V+ E+LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHS 159
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 69/132 (52%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT E LAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ LG+G G V LV K +G +A K++DK+++V + E+ IL+ ++ P
Sbjct: 46 IKTLGTGSFGRVMLV----KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
FL L + ++ E+ GG++ +R RF E RFYA+++V+ E+LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHS 159
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 69/132 (52%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAP II +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ LG+G G V LV K +G +A K++DK+++V + E+ IL+ ++ P
Sbjct: 46 IKTLGTGSFGRVMLV----KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
FL L + ++ E+ GG++ +R RF E RFYA+++V+ E+LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHS 159
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 69/132 (52%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSK-MGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ LG+G G V LV K +G +A K++DK+++V + E+ IL+ ++ P
Sbjct: 46 IKTLGTGSFGRVMLV----KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
FL L + ++ E+ GG++ +R RF E RFYA+++V+ E+LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHS 159
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 69/132 (52%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+ G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ LG+G G V LV K +G +A K++DK+++V + E+ IL+ ++ P
Sbjct: 46 IKTLGTGSFGRVMLV----KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
FL L + ++ E+ GG++ +R RF E RFYA+++V+ E+LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHS 159
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ LG+G G V LV K +G +A K++DK+++V + E+ IL+ ++ P
Sbjct: 46 IKTLGTGSFGRVMLV----KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
FL L + ++ E+ GG++ +R RF E RFYA+++V+ E+LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHS 159
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ LG+G G V LV K +G +A K++DK+++V + E+ IL+ ++ P
Sbjct: 67 IKTLGTGSFGRVMLV----KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 122
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
FL L + ++ E+ GG++ +R RF E RFYA+++V+ E+LH
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHS 180
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFA 209
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 209 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 268
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 269 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 326
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 327 YQRKVEAPFIPK 338
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ LG+G G V LV K +G +A K++DK+++V + E+ IL+ ++ P
Sbjct: 46 IKTLGTGSFGRVMLV----KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
FL L + ++ E+ GG++ +R RF E RFYA+++V+ E+LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHS 159
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ LG+G G V LV K +G +A K++DK+++V + E+ IL+ ++ P
Sbjct: 46 IKTLGTGSFGRVMLV----KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
FL L + ++ E+ GG++ +R RF E RFYA+++V+ E+LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHS 159
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ LG+G G V LV K +G +A K++DK+++V + E+ IL+ ++ P
Sbjct: 46 IKTLGTGSFGRVMLV----KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
FL L + ++ E+ GG++ +R RF E RFYA+++V+ E+LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHS 159
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+++ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ LG+G G V LV K +G +A K++DK+++V + E+ IL+ ++ P
Sbjct: 46 IKTLGTGSFGRVMLV----KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
FL L + ++ E+ GG++ +R RF E RFYA+++V+ E+LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHS 159
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ LG+G G V LV K +G +A K++DK+++V + E+ IL+ ++ P
Sbjct: 46 IKTLGTGSFGRVMLV----KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
FL L + ++ E+ GG++ +R RF E RFYA+++V+ E+LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHS 159
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ LG+G G V LV K +G +A K++DK+++V + E+ IL+ ++ P
Sbjct: 47 IKTLGTGSFGRVMLV----KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
FL L + ++ E+ GG++ +R RF E RFYA+++V+ E+LH
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHS 160
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFA 189
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 249 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ LG+G G V LV K +G +A K++DK+++V + E+ IL+ ++ P
Sbjct: 46 IKTLGTGSFGRVMLV----KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
FL L + ++ E+ GG++ +R RF E RFYA+++V+ E+LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFAEPHARFYAAQIVLTFEYLHS 159
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L + D LG G G V+L + K + FFA K + K ++ + +E+
Sbjct: 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQ----FFAIKALKKDVVLMDDDVECTMVEKR 69
Query: 139 ILEM-LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
+L + +HPFL ++ T + E+ GGDL + Q +F S FYA+E+
Sbjct: 70 VLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEI 127
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDL---SLKGDNSTSTAQLVSDQ-SP 253
++ L+FLH GI+YRDLK +N+L+ DGHI + DF + ++ GD T+ D +P
Sbjct: 128 ILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAP 187
Query: 254 PTGDQQPNDCAVDQPPFG 271
Q + +VD FG
Sbjct: 188 EILLGQKYNHSVDWWSFG 205
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 77/137 (56%), Gaps = 10/137 (7%)
Query: 312 DVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVV 371
D ++ F GT +Y+APEI+ G+ + ++VDWW+ G+ ++E+ G +PF G D E ++
Sbjct: 172 DAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR 231
Query: 372 ARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVNWALL--RCA 429
+P+ + AKDL+ +L V++P +R+G + I++H F +NW L +
Sbjct: 232 MDNPFYPR--WLEKEAKDLLVKLFVREPEKRLGVR---GDIRQHPLFREINWEELERKEI 286
Query: 430 KPPFIPR---PVTCRDL 443
PPF P+ P C +
Sbjct: 287 DPPFRPKVKSPFDCSNF 303
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ LG+G G V LV K +G +A K++DK+++V + E+ IL+ ++ P
Sbjct: 46 IKTLGTGSFGRVMLV----KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
FL L + ++ E+ GG++ +R RF E RFYA+++V+ E+LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHS 159
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ LG+G G V LV K +G +A K++DK+++V + E+ IL+ ++ P
Sbjct: 41 IKTLGTGSFGRVMLV----KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 96
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
FL L + ++ E+ GG++ +R RF E RFYA+++V+ E+LH
Sbjct: 97 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHS 154
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 155 LDLIYRDLKPENLLIDQQGYIQVTDFGFA 183
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 183 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 242
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 243 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 300
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 301 YQRKVEAPFIPK 312
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ LG+G G V LV K +G +A K++DK+++V + E+ IL+ ++ P
Sbjct: 33 IKTLGTGSFGRVMLV----KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 88
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
FL L + ++ E+ GG++ +R RF E RFYA+++V+ E+LH
Sbjct: 89 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHS 146
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 147 LDLIYRDLKPENLLIDEQGYIQVTDFGFA 175
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 175 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 234
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 235 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 292
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 293 YQRKVEAPFIPK 304
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 84/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 40 LDQFERIKTLGTGSFGRVMLV----KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ GG++ +R RF E RFYA+++V+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLT 153
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+L+ G+I +TDF +
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ LG+G G V LV K +G +A K++DK+++V + E+ IL+ ++ P
Sbjct: 46 IKTLGTGSFGRVMLV----KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
FL L + ++ E+ GG++ +R RF E RFYA+++V+ E+LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHS 159
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +IYRDLKPEN+++ G+I +TDF +
Sbjct: 160 LDLIYRDLKPENLIIDQQGYIQVTDFGFA 188
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 84/155 (54%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + +G+G G V LV K G +A K++DK+++V + E+ IL
Sbjct: 40 LDQFERIKTIGTGSFGRVMLV----KHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLT 153
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+L+ G+I + DF +
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA 188
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 248 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 305
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 306 YQRKVEAPFIPK 317
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
L + LG+G G V LV K G +A K++DK+++V + E+ I
Sbjct: 41 LDQFERIRTLGTGSFGRVMLV----KHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQ 96
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ ++ PFL L + ++ E+ PGG++ +R RF E RFYA+++V+
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLT 154
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+LH + +IYRDLKPEN+L+ G+I + DF +
Sbjct: 155 FEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFA 189
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
A+ + R+ GT EYLAPEII +G+ AVDWW LG+ I+E+ G PF
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 368 ANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALL 426
+V+ + FP S KDL+ LL D T+R G+ K G IK H++F +W +
Sbjct: 249 EKIVSGKVRFPSHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI 306
Query: 427 --RCAKPPFIPR 436
R + PFIP+
Sbjct: 307 YQRKVEAPFIPK 318
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 131/323 (40%), Gaps = 86/323 (26%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKREL-VSRNKESRARIERE--ILEMLDHP 146
LGSG V+ V K + + G +AAK + KR SR SR IERE IL+ + HP
Sbjct: 19 LGSG----VFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ TL+ + L+ E GG+L + + E A F +++ + +LH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEF-LKQILNGVYYLHS 132
Query: 207 MGIIYRDLKPENVLVRSDG----HIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPND 262
+ I + DLKPEN+++ I + DF L+ K D
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------------------- 169
Query: 263 CAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTH 322
FGN N GTPE V
Sbjct: 170 -------FGNE---FKNIF--------------------GTPEFV--------------- 184
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKE-- 380
APEI++ E G D W++G+ + L G +PF G + TLANV A EF E
Sbjct: 185 ---APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 381 PSVPGPAKDLIAQLLVKDPTRRM 403
+ AKD I +LLVKDP +RM
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRM 264
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 129/323 (39%), Gaps = 86/323 (26%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKREL-VSRNKESRARIERE--ILEMLDHP 146
LGSG V K + + G +AAK + KR SR SR IERE IL+ + HP
Sbjct: 19 LGSGQFAVVK----KCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ TL+ + L+ E GG+L + + E A F +++ + +LH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEFL-KQILNGVYYLHS 132
Query: 207 MGIIYRDLKPENVLVRSDG----HIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPND 262
+ I + DLKPEN+++ I + DF L+ K D
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------------------- 169
Query: 263 CAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTH 322
FGN N GTPE V
Sbjct: 170 -------FGNE---FKNIF--------------------GTPEFV--------------- 184
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKE-- 380
APEI++ E G D W++G+ + L G +PF G + TLANV A EF E
Sbjct: 185 ---APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 381 PSVPGPAKDLIAQLLVKDPTRRM 403
+ AKD I +LLVKDP +RM
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRM 264
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 129/323 (39%), Gaps = 86/323 (26%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKREL-VSRNKESRARIERE--ILEMLDHP 146
LGSG V K + + G +AAK + KR SR SR IERE IL+ + HP
Sbjct: 19 LGSGQFAVVK----KCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ TL+ + L+ E GG+L + + E A F +++ + +LH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEFL-KQILNGVYYLHS 132
Query: 207 MGIIYRDLKPENVLVRSDG----HIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPND 262
+ I + DLKPEN+++ I + DF L+ K D
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------------------- 169
Query: 263 CAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTH 322
FGN N GTPE V
Sbjct: 170 -------FGNE---FKNIF--------------------GTPEFV--------------- 184
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKE-- 380
APEI++ E G D W++G+ + L G +PF G + TLANV A EF E
Sbjct: 185 ---APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 381 PSVPGPAKDLIAQLLVKDPTRRM 403
+ AKD I +LLVKDP +RM
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRM 264
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 7/159 (4%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
+ D V +G G G V LV+ KS +A K++ K E++ R+ + ER+
Sbjct: 71 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRK----VYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
I+ + P++ L+ R+ ++ E+ PGGDL L + E RFY +EVV
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL---MSNYDVPEKWARFYTAEVV 183
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLK 237
+AL+ +H MG I+RD+KP+N+L+ GH+ L DF +K
Sbjct: 184 LALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 222
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 81/159 (50%), Gaps = 12/159 (7%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEG----HGNAVDWWTLGIFIFELF 352
KL + GT + + VR + VGT +Y++PE++ +G +G DWW++G+F++E+
Sbjct: 213 KLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
Query: 353 YGTTPFKGIDHELTLANVV--ARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGAT 410
G TPF T + ++ +L FP + + AK+LI L D R+G + G
Sbjct: 273 VGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLG-RNGVE 330
Query: 411 AIKRHQFFNGVNWAL--LRCAKPPFIPRPVTCRDLTTTN 447
IKRH FF WA LR P +P D+ T+N
Sbjct: 331 EIKRHLFFKNDQWAWETLRDTVAPVVPD--LSSDIDTSN 367
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 7/159 (4%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
+ D V +G G G V LV+ KS +A K++ K E++ R+ + ER+
Sbjct: 66 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRK----VYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
I+ + P++ L+ R+ ++ E+ PGGDL L + E RFY +EVV
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL---MSNYDVPEKWARFYTAEVV 178
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLK 237
+AL+ +H MG I+RD+KP+N+L+ GH+ L DF +K
Sbjct: 179 LALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 217
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 81/159 (50%), Gaps = 12/159 (7%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEG----HGNAVDWWTLGIFIFELF 352
KL + GT + + VR + VGT +Y++PE++ +G +G DWW++G+F++E+
Sbjct: 208 KLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 267
Query: 353 YGTTPFKGIDHELTLANVV--ARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGAT 410
G TPF T + ++ +L FP + + AK+LI L D R+G + G
Sbjct: 268 VGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLG-RNGVE 325
Query: 411 AIKRHQFFNGVNWAL--LRCAKPPFIPRPVTCRDLTTTN 447
IKRH FF WA LR P +P D+ T+N
Sbjct: 326 EIKRHLFFKNDQWAWETLRDTVAPVVPD--LSSDIDTSN 362
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 129/323 (39%), Gaps = 86/323 (26%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKREL-VSRNKESRARIERE--ILEMLDHP 146
LGSG V K + + G +AAK + KR SR SR IERE IL+ + HP
Sbjct: 19 LGSGQFAVVK----KCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ TL+ + L+ E GG+L + + E A F +++ + +LH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEF-LKQILNGVYYLHS 132
Query: 207 MGIIYRDLKPENVLVRSDG----HIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPND 262
+ I + DLKPEN+++ I + DF L+ K D
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------------------- 169
Query: 263 CAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTH 322
FGN N GTPE V
Sbjct: 170 -------FGNE---FKNIF--------------------GTPEFV--------------- 184
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKE-- 380
APEI++ E G D W++G+ + L G +PF G + TLANV A EF E
Sbjct: 185 ---APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 381 PSVPGPAKDLIAQLLVKDPTRRM 403
+ AKD I +LLVKDP +RM
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRM 264
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 7/159 (4%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
+ D V +G G G V LV+ KS +A K++ K E++ R+ + ER+
Sbjct: 71 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRK----VYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
I+ + P++ L+ R+ ++ E+ PGGDL L + E RFY +EVV
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL---MSNYDVPEKWARFYTAEVV 183
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLK 237
+AL+ +H MG I+RD+KP+N+L+ GH+ L DF +K
Sbjct: 184 LALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 222
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 81/159 (50%), Gaps = 12/159 (7%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEG----HGNAVDWWTLGIFIFELF 352
KL + GT + + VR + VGT +Y++PE++ +G +G DWW++G+F++E+
Sbjct: 213 KLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
Query: 353 YGTTPFKGIDHELTLANVV--ARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGAT 410
G TPF T + ++ +L FP + + AK+LI L D R+G + G
Sbjct: 273 VGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLG-RNGVE 330
Query: 411 AIKRHQFFNGVNWAL--LRCAKPPFIPRPVTCRDLTTTN 447
IKRH FF WA LR P +P D+ T+N
Sbjct: 331 EIKRHLFFKNDQWAWETLRDTVAPVVPD--LSSDIDTSN 367
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 129/323 (39%), Gaps = 86/323 (26%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKREL-VSRNKESRARIERE--ILEMLDHP 146
LGSG V K + + G +AAK + KR SR SR IERE IL+ + HP
Sbjct: 19 LGSGQFAVVK----KCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ TL+ + L+ E GG+L + + E A F +++ + +LH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEFL-KQILNGVYYLHS 132
Query: 207 MGIIYRDLKPENVLVRSDG----HIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPND 262
+ I + DLKPEN+++ I + DF L+ K D
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------------------- 169
Query: 263 CAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTH 322
FGN N GTPE V
Sbjct: 170 -------FGNE---FKNIF--------------------GTPEFV--------------- 184
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKE-- 380
APEI++ E G D W++G+ + L G +PF G + TLANV A EF E
Sbjct: 185 ---APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 381 PSVPGPAKDLIAQLLVKDPTRRM 403
+ AKD I +LLVKDP +RM
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRM 264
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 129/323 (39%), Gaps = 86/323 (26%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKREL-VSRNKESRARIERE--ILEMLDHP 146
LGSG V K + + G +AAK + KR SR SR IERE IL+ + HP
Sbjct: 19 LGSGQFAVVK----KCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ TL+ + L+ E GG+L + + E A F +++ + +LH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEFL-KQILNGVYYLHS 132
Query: 207 MGIIYRDLKPENVLVRSDG----HIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPND 262
+ I + DLKPEN+++ I + DF L+ K D
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------------------- 169
Query: 263 CAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTH 322
FGN N GTPE V
Sbjct: 170 -------FGNE---FKNIF--------------------GTPEFV--------------- 184
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKE-- 380
APEI++ E G D W++G+ + L G +PF G + TLANV A EF E
Sbjct: 185 ---APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 381 PSVPGPAKDLIAQLLVKDPTRRM 403
+ AKD I +LLVKDP +RM
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRM 264
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 129/323 (39%), Gaps = 86/323 (26%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKREL-VSRNKESRARIERE--ILEMLDHP 146
LGSG V K + + G +AAK + KR SR SR IERE IL+ + HP
Sbjct: 18 LGSGQFAVVK----KCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ TL+ + L+ E GG+L + + E A F +++ + +LH
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEF-LKQILNGVYYLHS 131
Query: 207 MGIIYRDLKPENVLVRSDG----HIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPND 262
+ I + DLKPEN+++ I + DF L+ K D
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------------------- 168
Query: 263 CAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTH 322
FGN N GTPE V
Sbjct: 169 -------FGNE---FKNIF--------------------GTPEFV--------------- 183
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKE-- 380
APEI++ E G D W++G+ + L G +PF G + TLANV A EF E
Sbjct: 184 ---APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 240
Query: 381 PSVPGPAKDLIAQLLVKDPTRRM 403
+ AKD I +LLVKDP +RM
Sbjct: 241 SNTSALAKDFIRRLLVKDPKKRM 263
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 129/323 (39%), Gaps = 86/323 (26%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKREL-VSRNKESRARIERE--ILEMLDHP 146
LGSG V K + + G +AAK + KR SR SR IERE IL+ + HP
Sbjct: 19 LGSGQFAVVK----KCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ TL+ + L+ E GG+L + + E A F +++ + +LH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEF-LKQILNGVYYLHS 132
Query: 207 MGIIYRDLKPENVLVRSDG----HIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPND 262
+ I + DLKPEN+++ I + DF L+ K D
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------------------- 169
Query: 263 CAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTH 322
FGN N GTPE V
Sbjct: 170 -------FGNE---FKNIF--------------------GTPEFV--------------- 184
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKE-- 380
APEI++ E G D W++G+ + L G +PF G + TLANV A EF E
Sbjct: 185 ---APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 381 PSVPGPAKDLIAQLLVKDPTRRM 403
+ AKD I +LLVKDP +RM
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRM 264
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 129/323 (39%), Gaps = 86/323 (26%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKREL-VSRNKESRARIERE--ILEMLDHP 146
LGSG V K + + G +AAK + KR SR SR IERE IL+ + HP
Sbjct: 18 LGSGQFAVVK----KCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ TL+ + L+ E GG+L + + E A F +++ + +LH
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEF-LKQILNGVYYLHS 131
Query: 207 MGIIYRDLKPENVLVRSDG----HIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPND 262
+ I + DLKPEN+++ I + DF L+ K D
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------------------- 168
Query: 263 CAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTH 322
FGN N GTPE V
Sbjct: 169 -------FGNE---FKNIF--------------------GTPEFV--------------- 183
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKE-- 380
APEI++ E G D W++G+ + L G +PF G + TLANV A EF E
Sbjct: 184 ---APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 240
Query: 381 PSVPGPAKDLIAQLLVKDPTRRM 403
+ AKD I +LLVKDP +RM
Sbjct: 241 SNTSALAKDFIRRLLVKDPKKRM 263
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 129/323 (39%), Gaps = 86/323 (26%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKREL-VSRNKESRARIERE--ILEMLDHP 146
LGSG V K + + G +AAK + KR SR SR IERE IL+ + HP
Sbjct: 19 LGSGQFAVVK----KCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ TL+ + L+ E GG+L + + E A F +++ + +LH
Sbjct: 75 NVITLHEVYENKTDVILIGELVAGGELFDFLA-EKESLTEEEATEF-LKQILNGVYYLHS 132
Query: 207 MGIIYRDLKPENVLVRSDG----HIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPND 262
+ I + DLKPEN+++ I + DF L+ K D
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------------------- 169
Query: 263 CAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTH 322
FGN N GTPE V
Sbjct: 170 -------FGNE---FKNIF--------------------GTPEFV--------------- 184
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKE-- 380
APEI++ E G D W++G+ + L G +PF G + TLANV A EF E
Sbjct: 185 ---APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 381 PSVPGPAKDLIAQLLVKDPTRRM 403
+ AKD I +LLVKDP +RM
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRM 264
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 81/157 (51%), Gaps = 7/157 (4%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
+ L+D F+ LG G G V L K +A K++ K ++ + +E+
Sbjct: 16 VKLTDFNFLMVLGKGSFGKVMLADRKGTEE----LYAIKILKKDVVIQDDDVECTMVEKR 71
Query: 139 ILEMLDHP-FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
+L +LD P FL L++ + E+ GGDL + Q +F E FYA+E+
Sbjct: 72 VLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL--MYHIQQVGKFKEPQAVFYAAEI 129
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDL 234
+ L FLH GIIYRDLK +NV++ S+GHI + DF +
Sbjct: 130 SIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGM 166
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 70/127 (55%), Gaps = 5/127 (3%)
Query: 313 VRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVA 372
V + F GT +Y+APEII+ + +G +VDWW G+ ++E+ G PF G D + +++
Sbjct: 175 VTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME 234
Query: 373 RALEFPKEPSVPGPAKDLIAQLLVKDPTRRMG-SKMGATAIKRHQFFNGVNWALL--RCA 429
+ +PK S+ A + L+ K P +R+G G ++ H FF ++W L R
Sbjct: 235 HNVSYPK--SLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREI 292
Query: 430 KPPFIPR 436
+PPF P+
Sbjct: 293 QPPFKPK 299
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 129/323 (39%), Gaps = 86/323 (26%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKREL-VSRNKESRARIERE--ILEMLDHP 146
LGSG V K + + G +AAK + KR SR SR IERE IL+ + HP
Sbjct: 19 LGSGQFAVVK----KCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ TL+ + L+ E GG+L + + E A F +++ + +LH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEF-LKQILNGVYYLHS 132
Query: 207 MGIIYRDLKPENVLVRSDG----HIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPND 262
+ I + DLKPEN+++ I + DF L+ K D
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------------------- 169
Query: 263 CAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTH 322
FGN N GTPE V
Sbjct: 170 -------FGNE---FKNIF--------------------GTPEFV--------------- 184
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKE-- 380
APEI++ E G D W++G+ + L G +PF G + TLANV A EF E
Sbjct: 185 ---APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 381 PSVPGPAKDLIAQLLVKDPTRRM 403
+ AKD I +LLVKDP +RM
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRM 264
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 129/323 (39%), Gaps = 86/323 (26%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKREL-VSRNKESRARIERE--ILEMLDHP 146
LGSG V K + + G +AAK + KR SR SR IERE IL+ + HP
Sbjct: 19 LGSGKFAVVK----KCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ TL+ + L+ E GG+L + + E A F +++ + +LH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEF-LKQILNGVYYLHS 132
Query: 207 MGIIYRDLKPENVLVRSDG----HIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPND 262
+ I + DLKPEN+++ I + DF L+ K D
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------------------- 169
Query: 263 CAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTH 322
FGN N GTPE V
Sbjct: 170 -------FGNE---FKNIF--------------------GTPEFV--------------- 184
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKE-- 380
APEI++ E G D W++G+ + L G +PF G + TLANV A EF E
Sbjct: 185 ---APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 381 PSVPGPAKDLIAQLLVKDPTRRM 403
+ AKD I +LLVKDP +RM
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRM 264
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 129/323 (39%), Gaps = 86/323 (26%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKREL-VSRNKESRARIERE--ILEMLDHP 146
LGSG V K + + G +AAK + KR SR SR IERE IL+ + HP
Sbjct: 19 LGSGQFAVVK----KCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ TL+ + L+ E GG+L + + E A F +++ + +LH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEF-LKQILNGVYYLHS 132
Query: 207 MGIIYRDLKPENVLVRSDG----HIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPND 262
+ I + DLKPEN+++ I + DF L+ K D
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------------------- 169
Query: 263 CAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTH 322
FGN N GTPE V
Sbjct: 170 -------FGNE---FKNIF--------------------GTPEFV--------------- 184
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKE-- 380
APEI++ E G D W++G+ + L G +PF G + TLANV A EF E
Sbjct: 185 ---APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 381 PSVPGPAKDLIAQLLVKDPTRRM 403
+ AKD I +LLVKDP +RM
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRM 264
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
+ D V +G G G V LV+ K+ +A K++ K E++ R+ + ER+
Sbjct: 72 MKAEDYDVVKVIGRGAFGEVQLVRHKASQK----VYAMKLLSKFEMIKRSDSAFFWEERD 127
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
I+ + P++ L+ ++ ++ E+ PGGDL L + E +FY +EVV
Sbjct: 128 IMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNL---MSNYDVPEKWAKFYTAEVV 184
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNS 241
+AL+ +H MG+I+RD+KP+N+L+ GH+ L DF +K D +
Sbjct: 185 LALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET 227
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 12/159 (7%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEG----HGNAVDWWTLGIFIFELF 352
KL + GT + E V + VGT +Y++PE++ +G +G DWW++G+F+FE+
Sbjct: 214 KLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEML 273
Query: 353 YGTTPFKGIDHELTLANVV--ARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGAT 410
G TPF T + ++ +L FP++ + AK+LI L D R+G + G
Sbjct: 274 VGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLICAFLT-DREVRLG-RNGVE 331
Query: 411 AIKRHQFF--NGVNWALLRCAKPPFIPRPVTCRDLTTTN 447
IK+H FF + NW +R P +P D+ ++N
Sbjct: 332 EIKQHPFFKNDQWNWDNIRETAAPVVPE--LSSDIDSSN 368
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 128/323 (39%), Gaps = 86/323 (26%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKREL-VSRNKESRARIERE--ILEMLDHP 146
LGSG V K + + G +AAK + KR SR SR IERE IL+ + HP
Sbjct: 19 LGSGQFAVVK----KCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ TL+ + L+ E GG+L + + E A F +++ + +LH
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFLA-EKESLTEEEATEFL-KQILNGVYYLHS 132
Query: 207 MGIIYRDLKPENVLVRSDG----HIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPND 262
+ I + DLKPEN+++ I + DF L+ K D
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID----------------------- 169
Query: 263 CAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTH 322
FGN N GTP VA
Sbjct: 170 -------FGNE---FKNIF--------------------GTPAFVA-------------- 185
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKE-- 380
PEI++ E G D W++G+ + L G +PF G + TLANV A EF E
Sbjct: 186 ----PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYF 241
Query: 381 PSVPGPAKDLIAQLLVKDPTRRM 403
+ AKD I +LLVKDP +RM
Sbjct: 242 SNTSALAKDFIRRLLVKDPKKRM 264
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 82/146 (56%), Gaps = 6/146 (4%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+G G G V +VQ ++ +A K M+K++ V RN+ E +I++ L+HPFL
Sbjct: 23 IGKGSFGKVCIVQ----KNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLV 78
Query: 150 TLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGI 209
L+ + ++ + GGDL Q + F E V+ + E+V+AL++L I
Sbjct: 79 NLWYSFQDEEDMFMVVDLLLGGDLRY--HLQQNVHFKEETVKLFICELVMALDYLQNQRI 136
Query: 210 IYRDLKPENVLVRSDGHIMLTDFDLS 235
I+RD+KP+N+L+ GH+ +TDF+++
Sbjct: 137 IHRDMKPDNILLDEHGHVHITDFNIA 162
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 23/139 (16%)
Query: 310 PLDVRSMSFVGTHEYLAPEIIS---GEGHGNAVDWWTLGIFIFELFYGTTPF-------- 358
P + + + GT Y+APE+ S G G+ AVDWW+LG+ +EL G P+
Sbjct: 166 PRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS 225
Query: 359 KGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFF 418
K I H VV + +E L+ +LL +P +R + ++ +
Sbjct: 226 KEIVHTFE-TTVVTYPSAWSQE------MVSLLKKLLEPNPDQRFSQ---LSDVQNFPYM 275
Query: 419 NGVNW--ALLRCAKPPFIP 435
N +NW + P FIP
Sbjct: 276 NDINWDAVFQKRLIPGFIP 294
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 86/155 (55%), Gaps = 5/155 (3%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
D + +G G G V +V+LK N FA K+++K E++ R + + R ER++L
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLK----NADKVFAMKILNKWEMLKRAETACFREERDVLVN 130
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
D ++ TL+ L+ ++ GGDL L + D R E RFY +E+V+A++
Sbjct: 131 GDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFED-RLPEEMARFYLAEMVIAID 189
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLK 237
+H + ++RD+KP+N+L+ +GHI L DF LK
Sbjct: 190 SVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLK 224
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 88/164 (53%), Gaps = 12/164 (7%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIIS----GEG-HGNAVDWWTLGIFIFEL 351
+L + G+ + E V+S VGT +Y++PEI+ G+G +G DWW+LG+ ++E+
Sbjct: 215 RLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEM 274
Query: 352 FYGTTPFKGIDHELTLANVV--ARALEFPKEPS-VPGPAKDLIAQLLVKDPTRRMGSKMG 408
YG TPF T ++ +FP + + V AKDLI +L+ R+G G
Sbjct: 275 LYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICS-REHRLGQN-G 332
Query: 409 ATAIKRHQFFNGVNWALLRCAKPPFIPRPVTCRDLTTTNSSIDN 452
K+H FF+G++W +R + P+IP + D T+N +D+
Sbjct: 333 IEDFKKHPFFSGIDWDNIRNCEAPYIPEVSSPTD--TSNFDVDD 374
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 88/162 (54%), Gaps = 13/162 (8%)
Query: 79 LTLSDLRFVHRL-GSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER 137
LT++D VHR+ G G G VY + ++ G +A K +DK+ + + E+ A ER
Sbjct: 185 LTMNDFS-VHRIIGRGGFGEVY----GCRKADTGKMYAMKCLDKKRIKMKQGETLALNER 239
Query: 138 EILEML---DHPFLPTLYATLDCPRWSCLLTEFCPGGDLHV-LRQRQPDKRFHESAVRFY 193
+L ++ D PF+ + P + + GGDLH L Q F E+ +RFY
Sbjct: 240 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV---FSEADMRFY 296
Query: 194 ASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
A+E+++ LE +H ++YRDLKP N+L+ GH+ ++D L+
Sbjct: 297 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 338
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 11/125 (8%)
Query: 319 VGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFK----GIDHELTLANVVAR 373
VGTH Y+APE++ G + ++ DW++LG +F+L G +PF+ HE+ +
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM- 408
Query: 374 ALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALLRCAK-- 430
A+E P S + L+ LL +D RR+G GA +K FF ++W ++ K
Sbjct: 409 AVELP--DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYP 466
Query: 431 PPFIP 435
PP IP
Sbjct: 467 PPLIP 471
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 88/162 (54%), Gaps = 13/162 (8%)
Query: 79 LTLSDLRFVHRL-GSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER 137
LT++D VHR+ G G G VY + ++ G +A K +DK+ + + E+ A ER
Sbjct: 186 LTMNDFS-VHRIIGRGGFGEVY----GCRKADTGKMYAMKCLDKKRIKMKQGETLALNER 240
Query: 138 EILEML---DHPFLPTLYATLDCPRWSCLLTEFCPGGDLHV-LRQRQPDKRFHESAVRFY 193
+L ++ D PF+ + P + + GGDLH L Q F E+ +RFY
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV---FSEADMRFY 297
Query: 194 ASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
A+E+++ LE +H ++YRDLKP N+L+ GH+ ++D L+
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 11/125 (8%)
Query: 319 VGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFK----GIDHELTLANVVAR 373
VGTH Y+APE++ G + ++ DW++LG +F+L G +PF+ HE+ +
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM- 409
Query: 374 ALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALLRCAK-- 430
A+E P S + L+ LL +D RR+G GA +K FF ++W ++ K
Sbjct: 410 AVELP--DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYP 467
Query: 431 PPFIP 435
PP IP
Sbjct: 468 PPLIP 472
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 88/162 (54%), Gaps = 13/162 (8%)
Query: 79 LTLSDLRFVHRL-GSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER 137
LT++D VHR+ G G G VY + ++ G +A K +DK+ + + E+ A ER
Sbjct: 186 LTMNDFS-VHRIIGRGGFGEVY----GCRKADTGKMYAMKCLDKKRIKMKQGETLALNER 240
Query: 138 EILEML---DHPFLPTLYATLDCPRWSCLLTEFCPGGDLHV-LRQRQPDKRFHESAVRFY 193
+L ++ D PF+ + P + + GGDLH L Q F E+ +RFY
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV---FSEADMRFY 297
Query: 194 ASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
A+E+++ LE +H ++YRDLKP N+L+ GH+ ++D L+
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 11/125 (8%)
Query: 319 VGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFK----GIDHELTLANVVAR 373
VGTH Y+APE++ G + ++ DW++LG +F+L G +PF+ HE+ +
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM- 409
Query: 374 ALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALLRCAK-- 430
A+E P S + L+ LL +D RR+G GA +K FF ++W ++ K
Sbjct: 410 AVELP--DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYP 467
Query: 431 PPFIP 435
PP IP
Sbjct: 468 PPLIP 472
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 88/162 (54%), Gaps = 13/162 (8%)
Query: 79 LTLSDLRFVHRL-GSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER 137
LT++D VHR+ G G G VY + ++ G +A K +DK+ + + E+ A ER
Sbjct: 186 LTMNDFS-VHRIIGRGGFGEVY----GCRKADTGKMYAMKCLDKKRIKMKQGETLALNER 240
Query: 138 EILEML---DHPFLPTLYATLDCPRWSCLLTEFCPGGDLHV-LRQRQPDKRFHESAVRFY 193
+L ++ D PF+ + P + + GGDLH L Q F E+ +RFY
Sbjct: 241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV---FSEADMRFY 297
Query: 194 ASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
A+E+++ LE +H ++YRDLKP N+L+ GH+ ++D L+
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 11/125 (8%)
Query: 319 VGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFK----GIDHELTLANVVAR 373
VGTH Y+APE++ G + ++ DW++LG +F+L G +PF+ HE+ +
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM- 409
Query: 374 ALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGS-KMGATAIKRHQFFNGVNWALLRCAK-- 430
A+E P S + L+ LL +D RR+G GA +K FF ++W ++ K
Sbjct: 410 AVELP--DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYP 467
Query: 431 PPFIP 435
PP IP
Sbjct: 468 PPLIP 472
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 5/175 (2%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L D + +G G V +V++K G +A K+M+K +++ R + S R ER+
Sbjct: 58 LQRDDFEILKVIGRGAFSEVAVVKMK----QTGQVYAMKIMNKWDMLKRGEVSCFREERD 113
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
+L D ++ L+ + L+ E+ GGDL L + ++ E A RFY +E+V
Sbjct: 114 VLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMA-RFYLAEIV 172
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSP 253
+A++ +H +G ++RD+KP+N+L+ GHI L DF LK + LV+ +P
Sbjct: 173 MAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTP 227
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 70/133 (52%), Gaps = 12/133 (9%)
Query: 313 VRSMSFVGTHEYLAPEIISGEGHGNAV-------DWWTLGIFIFELFYGTTPFKGIDHEL 365
VRS+ VGT +YL+PEI+ G G DWW LG+F +E+FYG TPF
Sbjct: 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE 277
Query: 366 TLANVV--ARALEFP-KEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVN 422
T +V L P + VP A+D I +LL P R+G + GA + H FF G++
Sbjct: 278 TYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCP-PETRLG-RGGAGDFRTHPFFFGLD 335
Query: 423 WALLRCAKPPFIP 435
W LR + PPF P
Sbjct: 336 WDGLRDSVPPFTP 348
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 135/351 (38%), Gaps = 101/351 (28%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNK--------- 129
+ L+ +G G G V L + + N+ ++A KV+ K++L+ +
Sbjct: 10 VQLNQYTLKDEIGKGSYGVVKL----AYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRG 65
Query: 130 ---------ESRARIER-----EILEMLDHPFLPTLYATLDCPRWSCL--LTEFCPGGDL 173
+ R IE+ IL+ LDHP + L LD P L + E G +
Sbjct: 66 TRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV 125
Query: 174 HVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFD 233
+ +P E RFY +++ +E+LH II+RD+KP N+LV DGHI + DF
Sbjct: 126 MEVPTLKP---LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFG 182
Query: 234 LSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKRR 293
+S F S ++ N +
Sbjct: 183 VS--------------------------------NEFKGSDALLSNTV------------ 198
Query: 294 RKKKLGNPGTPEIVA-EPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELF 352
GTP +A E L F G A+D W +G+ ++
Sbjct: 199 --------GTPAFMAPESLSETRKIFSG----------------KALDVWAMGVTLYCFV 234
Query: 353 YGTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRM 403
+G PF + + ++ALEFP +P + KDLI ++L K+P R+
Sbjct: 235 FGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRI 285
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 91/171 (53%), Gaps = 5/171 (2%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
D + +G G G V +V++K N +A K+++K E++ R + + R ER++L
Sbjct: 91 DFEIIKVIGRGAFGEVAVVKMK----NTERIYAMKILNKWEMLKRAETACFREERDVLVN 146
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
D ++ L+ L+ ++ GGDL L + DK E RFY E+V+A++
Sbjct: 147 GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAID 205
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSP 253
+H + ++RD+KP+NVL+ +GHI L DF LK ++ + V+ +P
Sbjct: 206 SIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTP 256
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 80/150 (53%), Gaps = 12/150 (8%)
Query: 313 VRSMSFVGTHEYLAPEIIS----GEG-HGNAVDWWTLGIFIFELFYGTTPFKGIDHELTL 367
V+S VGT +Y++PEI+ G G +G DWW+LG+ ++E+ YG TPF T
Sbjct: 247 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 306
Query: 368 ANVV--ARALEFPKEPS-VPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVNWA 424
++ +FP + V AKDLI Q L+ RR+G G K+H FF G+NW
Sbjct: 307 GKIMNHEERFQFPSHVTDVSEEAKDLI-QRLICSRERRLGQN-GIEDFKKHAFFEGLNWE 364
Query: 425 LLRCAKPPFIPRPVTCRDLTTTNSSIDNSI 454
+R + P+IP + D T+N +D+ +
Sbjct: 365 NIRNLEAPYIPDVSSPSD--TSNFDVDDDV 392
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 154/370 (41%), Gaps = 94/370 (25%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKREL-VSRNKES----RARIEREILEMLD 144
LGSG G V L + K+ A K++ KR+ + +E+ E EIL+ L+
Sbjct: 18 LGSGACGEVKLA-FERKTCKK---VAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 145 HPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
HP + + D + +L E GG+L + +KR E+ + Y ++++A+++L
Sbjct: 74 HPCIIKIKNFFDAEDYYIVL-ELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYL 130
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCA 264
H GII+RDLKPENVL+ S Q DC
Sbjct: 131 HENGIIHRDLKPENVLLSS-----------------------------------QEEDCL 155
Query: 265 VDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEY 324
+ FG+S +I+ E +R++ GT Y
Sbjct: 156 IKITDFGHS-------------------------------KILGETSLMRTL--CGTPTY 182
Query: 325 LAPEI---ISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLAN-VVARALEFPKE 380
LAPE+ + G+ AVD W+LG+ +F G PF +++L + + + F E
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 242
Query: 381 --PSVPGPAKDLIAQLLVKDPTRRMGSK-------MGATAIKRHQFFNGVNWALLRCAKP 431
V A DL+ +LLV DP R ++ + +KR +F + ++ AKP
Sbjct: 243 VWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKR-KFQDLLSEENESTAKP 301
Query: 432 PFIPRPVTCR 441
+ +P T R
Sbjct: 302 QVLAQPSTSR 311
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
+ L+D F+ LG G G V L + K +A K++ K ++ + +E+
Sbjct: 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDE----LYAVKILKKDVVIQDDDVECTMVEKR 393
Query: 139 ILEMLDHP-FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
+L + P FL L++ + E+ GGDL + Q RF E FYA+E+
Sbjct: 394 VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPHAVFYAAEI 451
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDL 234
+ L FL GIIYRDLK +NV++ S+GHI + DF +
Sbjct: 452 AIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGM 488
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 71/127 (55%), Gaps = 5/127 (3%)
Query: 313 VRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVA 372
V + F GT +Y+APEII+ + +G +VDWW G+ ++E+ G PF+G D + +++
Sbjct: 497 VTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 556
Query: 373 RALEFPKEPSVPGPAKDLIAQLLVKDPTRRMG-SKMGATAIKRHQFFNGVNWALL--RCA 429
+ +PK S+ A + L+ K P +R+G G IK H FF ++W L +
Sbjct: 557 HNVAYPK--SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEI 614
Query: 430 KPPFIPR 436
+PP+ P+
Sbjct: 615 QPPYKPK 621
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
+ L+D F+ LG G G V L + K +A K++ K ++ + +E+
Sbjct: 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDE----LYAVKILKKDVVIQDDDVECTMVEKR 72
Query: 139 ILEMLDHP-FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
+L + P FL L++ + E+ GGDL + Q RF E FYA+E+
Sbjct: 73 VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPHAVFYAAEI 130
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDL 234
+ L FL GIIYRDLK +NV++ S+GHI + DF +
Sbjct: 131 AIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGM 167
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 71/127 (55%), Gaps = 5/127 (3%)
Query: 313 VRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVA 372
V + F GT +Y+APEII+ + +G +VDWW G+ ++E+ G PF+G D + +++
Sbjct: 176 VTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 235
Query: 373 RALEFPKEPSVPGPAKDLIAQLLVKDPTRRMG-SKMGATAIKRHQFFNGVNWALL--RCA 429
+ +PK S+ A + L+ K P +R+G G IK H FF ++W L +
Sbjct: 236 HNVAYPK--SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEI 293
Query: 430 KPPFIPR 436
+PP+ P+
Sbjct: 294 QPPYKPK 300
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 137/328 (41%), Gaps = 86/328 (26%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKREL-VSRNKES----RARIEREILEMLD 144
LGSG G V L + K+ A K++ KR+ + +E+ E EIL+ L+
Sbjct: 18 LGSGACGEVKLA-FERKTCKK---VAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 145 HPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
HP + + D + +L E GG+L + +KR E+ + Y ++++A+++L
Sbjct: 74 HPCIIKIKNFFDAEDYYIVL-ELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYL 130
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCA 264
H GII+RDLKPENVL+ S Q DC
Sbjct: 131 HENGIIHRDLKPENVLLSS-----------------------------------QEEDCL 155
Query: 265 VDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEY 324
+ FG+S +I+ E +R++ GT Y
Sbjct: 156 IKITDFGHS-------------------------------KILGETSLMRTL--CGTPTY 182
Query: 325 LAPEI---ISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLAN-VVARALEFPKE 380
LAPE+ + G+ AVD W+LG+ +F G PF +++L + + + F E
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 242
Query: 381 --PSVPGPAKDLIAQLLVKDPTRRMGSK 406
V A DL+ +LLV DP R ++
Sbjct: 243 VWAEVSEKALDLVKKLLVVDPKARFTTE 270
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 137/328 (41%), Gaps = 86/328 (26%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKREL-VSRNKES----RARIEREILEMLD 144
LGSG G V L + K+ A K++ KR+ + +E+ E EIL+ L+
Sbjct: 18 LGSGACGEVKLA-FERKTCKK---VAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 145 HPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
HP + + D + +L E GG+L + +KR E+ + Y ++++A+++L
Sbjct: 74 HPCIIKIKNFFDAEDYYIVL-ELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYL 130
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCA 264
H GII+RDLKPENVL+ S Q DC
Sbjct: 131 HENGIIHRDLKPENVLLSS-----------------------------------QEEDCL 155
Query: 265 VDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEY 324
+ FG+S +I+ E +R++ GT Y
Sbjct: 156 IKITDFGHS-------------------------------KILGETSLMRTL--CGTPTY 182
Query: 325 LAPEI---ISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLAN-VVARALEFPKE 380
LAPE+ + G+ AVD W+LG+ +F G PF +++L + + + F E
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 242
Query: 381 --PSVPGPAKDLIAQLLVKDPTRRMGSK 406
V A DL+ +LLV DP R ++
Sbjct: 243 VWAEVSEKALDLVKKLLVVDPKARFTTE 270
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 137/328 (41%), Gaps = 86/328 (26%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKREL-VSRNKES----RARIEREILEMLD 144
LGSG G V L + K+ A K++ KR+ + +E+ E EIL+ L+
Sbjct: 17 LGSGACGEVKLA-FERKTCKK---VAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 72
Query: 145 HPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
HP + + D + +L E GG+L + +KR E+ + Y ++++A+++L
Sbjct: 73 HPCIIKIKNFFDAEDYYIVL-ELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYL 129
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCA 264
H GII+RDLKPENVL+ S Q DC
Sbjct: 130 HENGIIHRDLKPENVLLSS-----------------------------------QEEDCL 154
Query: 265 VDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEY 324
+ FG+S +I+ E +R++ GT Y
Sbjct: 155 IKITDFGHS-------------------------------KILGETSLMRTL--CGTPTY 181
Query: 325 LAPEI---ISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLAN-VVARALEFPKE 380
LAPE+ + G+ AVD W+LG+ +F G PF +++L + + + F E
Sbjct: 182 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 241
Query: 381 --PSVPGPAKDLIAQLLVKDPTRRMGSK 406
V A DL+ +LLV DP R ++
Sbjct: 242 VWAEVSEKALDLVKKLLVVDPKARFTTE 269
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 137/328 (41%), Gaps = 86/328 (26%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKREL-VSRNKES----RARIEREILEMLD 144
LGSG G V L + K+ A K++ KR+ + +E+ E EIL+ L+
Sbjct: 24 LGSGACGEVKLA-FERKTCKK---VAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 79
Query: 145 HPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
HP + + D + +L E GG+L + +KR E+ + Y ++++A+++L
Sbjct: 80 HPCIIKIKNFFDAEDYYIVL-ELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYL 136
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCA 264
H GII+RDLKPENVL+ S Q DC
Sbjct: 137 HENGIIHRDLKPENVLLSS-----------------------------------QEEDCL 161
Query: 265 VDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEY 324
+ FG+S +I+ E +R++ GT Y
Sbjct: 162 IKITDFGHS-------------------------------KILGETSLMRTL--CGTPTY 188
Query: 325 LAPEI---ISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLAN-VVARALEFPKE 380
LAPE+ + G+ AVD W+LG+ +F G PF +++L + + + F E
Sbjct: 189 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 248
Query: 381 --PSVPGPAKDLIAQLLVKDPTRRMGSK 406
V A DL+ +LLV DP R ++
Sbjct: 249 VWAEVSEKALDLVKKLLVVDPKARFTTE 276
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 137/328 (41%), Gaps = 86/328 (26%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKREL-VSRNKES----RARIEREILEMLD 144
LGSG G V L + K+ A +++ KR+ + +E+ E EIL+ L+
Sbjct: 157 LGSGACGEVKLA-FERKTCKK---VAIRIISKRKFAIGSAREADPALNVETEIEILKKLN 212
Query: 145 HPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
HP + + D + +L E GG+L + +KR E+ + Y ++++A+++L
Sbjct: 213 HPCIIKIKNFFDAEDYYIVL-ELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYL 269
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCA 264
H GII+RDLKPENVL+ S Q DC
Sbjct: 270 HENGIIHRDLKPENVLLSS-----------------------------------QEEDCL 294
Query: 265 VDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEY 324
+ FG+S +I+ E +R++ GT Y
Sbjct: 295 IKITDFGHS-------------------------------KILGETSLMRTL--CGTPTY 321
Query: 325 LAPEI---ISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLAN-VVARALEFPKE 380
LAPE+ + G+ AVD W+LG+ +F G PF +++L + + + F E
Sbjct: 322 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 381
Query: 381 --PSVPGPAKDLIAQLLVKDPTRRMGSK 406
V A DL+ +LLV DP R ++
Sbjct: 382 VWAEVSEKALDLVKKLLVVDPKARFTTE 409
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 137/328 (41%), Gaps = 86/328 (26%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKREL-VSRNKES----RARIEREILEMLD 144
LGSG G V L + K+ A +++ KR+ + +E+ E EIL+ L+
Sbjct: 143 LGSGACGEVKLA-FERKTCKK---VAIRIISKRKFAIGSAREADPALNVETEIEILKKLN 198
Query: 145 HPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
HP + + D + +L E GG+L + +KR E+ + Y ++++A+++L
Sbjct: 199 HPCIIKIKNFFDAEDYYIVL-ELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQYL 255
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCA 264
H GII+RDLKPENVL+ S Q DC
Sbjct: 256 HENGIIHRDLKPENVLLSS-----------------------------------QEEDCL 280
Query: 265 VDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEY 324
+ FG+S +I+ E +R++ GT Y
Sbjct: 281 IKITDFGHS-------------------------------KILGETSLMRTL--CGTPTY 307
Query: 325 LAPEI---ISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLAN-VVARALEFPKE 380
LAPE+ + G+ AVD W+LG+ +F G PF +++L + + + F E
Sbjct: 308 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPE 367
Query: 381 --PSVPGPAKDLIAQLLVKDPTRRMGSK 406
V A DL+ +LLV DP R ++
Sbjct: 368 VWAEVSEKALDLVKKLLVVDPKARFTTE 395
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 130/319 (40%), Gaps = 84/319 (26%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARI-EREILEMLDHPFL 148
LG G G V LK K +A KV++K ++NK++ + E E+L+ LDHP +
Sbjct: 30 LGKGSFGEV----LKCKDRITQQEYAVKVINKAS--AKNKDTSTILREVELLKKLDHPNI 83
Query: 149 PTLYATLDCPRWSCLLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
L+ L+ ++ E GG+L ++++ KRF E +V + ++H
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYMHK 139
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVD 266
I++RDLKPEN+L+ S + DC +
Sbjct: 140 HNIVHRDLKPENILLES-----------------------------------KEKDCDIK 164
Query: 267 QPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLA 326
FG S+C N + K ++ GT Y+A
Sbjct: 165 IIDFGLSTCFQQNT------------KMKDRI---------------------GTAYYIA 191
Query: 327 PEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVA--RALEFPKEPSVP 384
PE++ G + D W+ G+ ++ L GT PF G + L V A + P+ ++
Sbjct: 192 PEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTIS 250
Query: 385 GPAKDLIAQLLVKDPTRRM 403
AKDLI ++L P+ R+
Sbjct: 251 DDAKDLIRKMLTFHPSLRI 269
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 8/232 (3%)
Query: 78 PLTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER 137
P+T + R LG G G V Q+++ G +A K ++K+ + R E+ A E+
Sbjct: 180 PVTKNTFRQYRVLGKGGFGEVCACQVRA----TGKMYACKKLEKKRIKKRKGEAMALNEK 235
Query: 138 EILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
+ILE ++ F+ +L + CL+ GGDL F E+ FYA+E+
Sbjct: 236 QILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEI 295
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGD 257
LE LH I+YRDLKPEN+L+ GHI ++D L++ Q + + G
Sbjct: 296 CCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAV----HVPEGQTIKGRVGTVGY 351
Query: 258 QQPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAE 309
P ++ F + + ++ P ++RKKK+ +V E
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE 403
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 7/132 (5%)
Query: 319 VGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFP 378
VGT Y+APE++ E + + DWW LG ++E+ G +PF+ ++ V E P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 379 KEPS--VPGPAKDLIAQLLVKDPTRRMGSKMG-ATAIKRHQFFNGVNWALLRCA--KPPF 433
+E S A+ L +QLL KDP R+G + G A +K H F +N+ L +PPF
Sbjct: 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPF 465
Query: 434 IPRP--VTCRDL 443
P P + C+D+
Sbjct: 466 KPDPQAIYCKDV 477
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 8/232 (3%)
Query: 78 PLTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER 137
P+T + R LG G G V Q+++ G +A K ++K+ + R E+ A E+
Sbjct: 180 PVTKNTFRQYRVLGKGGFGEVCACQVRA----TGKMYACKKLEKKRIKKRKGEAMALNEK 235
Query: 138 EILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
+ILE ++ F+ +L + CL+ GGDL F E+ FYA+E+
Sbjct: 236 QILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEI 295
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGD 257
LE LH I+YRDLKPEN+L+ GHI ++D L++ Q + + G
Sbjct: 296 CCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAV----HVPEGQTIKGRVGTVGY 351
Query: 258 QQPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAE 309
P ++ F + + ++ P ++RKKK+ +V E
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE 403
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 7/132 (5%)
Query: 319 VGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFP 378
VGT Y+APE++ E + + DWW LG ++E+ G +PF+ ++ V E P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 379 KEPS--VPGPAKDLIAQLLVKDPTRRMGSKMG-ATAIKRHQFFNGVNWALLRCA--KPPF 433
+E S A+ L +QLL KDP R+G + G A +K H F +N+ L +PPF
Sbjct: 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPF 465
Query: 434 IPRP--VTCRDL 443
P P + C+D+
Sbjct: 466 KPDPQAIYCKDV 477
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 128/318 (40%), Gaps = 82/318 (25%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
LG G G V LK K +A KV++K +++ + R E E+L+ LDHP +
Sbjct: 30 LGKGSFGEV----LKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIM 84
Query: 150 TLYATLDCPRWSCLLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYASEVVVALEFLHMM 207
L+ L+ ++ E GG+L ++++ KRF E +V + ++H
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYMHKH 140
Query: 208 GIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQ 267
I++RDLKPEN+L+ S + DC +
Sbjct: 141 NIVHRDLKPENILLES-----------------------------------KEKDCDIKI 165
Query: 268 PPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAP 327
FG S+C N + K ++G T Y+AP
Sbjct: 166 IDFGLSTCFQQNT------------KMKDRIG---------------------TAYYIAP 192
Query: 328 EIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVA--RALEFPKEPSVPG 385
E++ G + D W+ G+ ++ L GT PF G + L V A + P+ ++
Sbjct: 193 EVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISD 251
Query: 386 PAKDLIAQLLVKDPTRRM 403
AKDLI ++L P+ R+
Sbjct: 252 DAKDLIRKMLTFHPSLRI 269
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 125/316 (39%), Gaps = 78/316 (24%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
LG G G V LK K +A KV++K +++ + R E E+L+ LDHP +
Sbjct: 30 LGKGSFGEV----LKCKDRITQQEYAVKVINKASAKNKDTSTILR-EVELLKKLDHPNIM 84
Query: 150 TLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGI 209
L+ L+ ++ E GG+L + KRF E +V + ++H I
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGEL--FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 210 IYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQPP 269
++RDLKPEN+L+ S + DC +
Sbjct: 143 VHRDLKPENILLES-----------------------------------KEKDCDIKIID 167
Query: 270 FGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEI 329
FG S+C N + K ++G T Y+APE+
Sbjct: 168 FGLSTCFQQNT------------KMKDRIG---------------------TAYYIAPEV 194
Query: 330 ISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVA--RALEFPKEPSVPGPA 387
+ G + D W+ G+ ++ L GT PF G + L V A + P+ ++ A
Sbjct: 195 LRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 388 KDLIAQLLVKDPTRRM 403
KDLI ++L P+ R+
Sbjct: 254 KDLIRKMLTFHPSLRI 269
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 79/166 (47%), Gaps = 6/166 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
TL D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 10 TLEDFDIGRPLGKGKFGNVYL----ARERQSKFILALKVLFKTQLEKAGVEHQLRREVEI 65
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q RF E Y +E+
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSRFDEQRTATYITELAN 123
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTA 245
AL + H +I+RD+KPEN+L+ S+G + + DF S+ +S T
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTT 169
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
T+ D V LG G G+VYL ++ N A KV+ K +L E + R E E
Sbjct: 11 FTIDDFDIVRPLGKGKFGNVYL----AREKQNKFIMALKVLFKSQLEKEGVEHQLRREIE 66
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
I L HP + +Y + L+ EF P G+L+ ++ Q RF E + E+
Sbjct: 67 IQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELY--KELQKHGRFDEQRSATFMEELA 124
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSL 236
AL + H +I+RD+KPEN+L+ G + + DF S+
Sbjct: 125 DALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV 162
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 313 VRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVA 372
+R GT +YL PE+I G+ H VD W G+ +E G PF H T +V
Sbjct: 167 LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN 226
Query: 373 RALEFPKEPSVPGPAKDLIAQLLVKDPTRRM 403
L+FP P + +KDLI++LL P +R+
Sbjct: 227 VDLKFP--PFLSDGSKDLISKLLRYHPPQRL 255
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ N+ A KV+ K +L E + R E EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYL----AREKNSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 62 QSHLRHPNILRLYGYFHDSTRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 119
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTA 245
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S A
Sbjct: 120 ALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA 165
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 85 RFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLD 144
V LG G G VY K+K+ G AAKV++ + S + +E EIL D
Sbjct: 14 EIVGELGDGAFGKVY----KAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATCD 66
Query: 145 HPFLPTLYATL--DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
HP++ L D W ++ EFCPGG + + + D+ E ++ +++ AL
Sbjct: 67 HPYIVKLLGAYYHDGKLW--IMIEFCPGGAVDAI-MLELDRGLTEPQIQVVCRQMLEALN 123
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLK 237
FLH II+RDLK NVL+ +G I L DF +S K
Sbjct: 124 FLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK 158
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Query: 317 SFVGTHEYLAPEIISGEGHGNA-----VDWWTLGIFIFEL 351
SF+GT ++APE++ E + D W+LGI + E+
Sbjct: 168 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 6/162 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
TL D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 10 TLEDFDIGRPLGKGKFGNVYL----ARERQSKFILALKVLFKTQLEKAGVEHQLRREVEI 65
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q RF E Y +E+
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSRFDEQRTATYITELAN 123
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNS 241
AL + H +I+RD+KPEN+L+ S+G + + DF S+ +S
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS 165
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 78/154 (50%), Gaps = 12/154 (7%)
Query: 86 FVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDH 145
V LG G G VY K+K+ G AAKV++ + S + +E EIL DH
Sbjct: 23 IVGELGDGAFGKVY----KAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATCDH 75
Query: 146 PFLPTLYATL--DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEF 203
P++ L D W ++ EFCPGG + + + D+ E ++ +++ AL F
Sbjct: 76 PYIVKLLGAYYHDGKLW--IMIEFCPGGAVDAI-MLELDRGLTEPQIQVVCRQMLEALNF 132
Query: 204 LHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLK 237
LH II+RDLK NVL+ +G I L DF +S K
Sbjct: 133 LHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK 166
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Query: 317 SFVGTHEYLAPEIISGEG-----HGNAVDWWTLGIFIFEL 351
SF+GT ++APE++ E + D W+LGI + E+
Sbjct: 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 87
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 88 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 145
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTST 244
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S T
Sbjct: 146 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 190
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 66
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G+ V ++ Q +F E Y +E+
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPRGE--VYKELQKLSKFDEQRTATYITELAN 124
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTST 244
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S T
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 169
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 314 RSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVAR 373
R + GT +YL PE+I G H VD W+LG+ +E G PF+ ++ T +
Sbjct: 167 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 374 ALEFPKEPSVPGPAKDLIAQLLVKDPTRR 402
FP V A+DLI++LL +P++R
Sbjct: 227 EFTFPD--FVTEGARDLISRLLKHNPSQR 253
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 66
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 124
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTA 245
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S T
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 170
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 78
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 79 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 136
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTA 245
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S T
Sbjct: 137 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 182
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 119
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTA 245
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S T
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 165
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 119
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTST 244
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S T
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 164
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 66
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 124
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTST 244
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S T
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 169
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 122
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTA 245
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S T
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 168
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 122
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTA 245
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S A
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA 168
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 62
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 63 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 120
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTST 244
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S T
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 165
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 65
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 123
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTST 244
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S T
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 168
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL + K + A KV+ K +L E + R E EI
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRK----FILALKVLFKAQLEKAGVEHQLRREVEI 58
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 59 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 116
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTA 245
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S T
Sbjct: 117 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 162
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 119
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTST 244
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S T
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 164
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 119
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTST 244
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S T
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 164
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
T+ D LG G G+VYL ++ N A KV+ K +L E + R E E
Sbjct: 12 FTIDDFDIGRPLGKGKFGNVYL----AREKQNKFIMALKVLFKSQLEKEGVEHQLRREIE 67
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
I L HP + +Y + L+ EF P G+L+ ++ Q RF E + E+
Sbjct: 68 IQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELY--KELQKHGRFDEQRSATFMEELA 125
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSL 236
AL + H +I+RD+KPEN+L+ G + + DF S+
Sbjct: 126 DALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV 163
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 313 VRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVA 372
+R GT +YL PE+I G+ H VD W G+ +E G PF H T +V
Sbjct: 168 LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN 227
Query: 373 RALEFPKEPSVPGPAKDLIAQLLVKDPTRRM 403
L+FP P + +KDLI++LL P +R+
Sbjct: 228 VDLKFP--PFLSDGSKDLISKLLRYHPPQRL 256
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
T+ D LG G G+VYL ++ N A KV+ K +L E + R E E
Sbjct: 11 FTIDDFDIGRPLGKGKFGNVYL----AREKQNKFIMALKVLFKSQLEKEGVEHQLRREIE 66
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
I L HP + +Y + L+ EF P G+L+ ++ Q RF E + E+
Sbjct: 67 IQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELY--KELQKHGRFDEQRSATFMEELA 124
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSL 236
AL + H +I+RD+KPEN+L+ G + + DF S+
Sbjct: 125 DALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV 162
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 313 VRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVA 372
+R GT +YL PE+I G+ H VD W G+ +E G PF H T +V
Sbjct: 167 LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN 226
Query: 373 RALEFPKEPSVPGPAKDLIAQLLVKDPTRRM 403
L+FP P + +KDLI++LL P +R+
Sbjct: 227 VDLKFP--PFLSDGSKDLISKLLRYHPPQRL 255
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 66
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 124
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTST 244
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S T
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 169
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 119
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTST 244
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S T
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 164
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 60
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 61 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 118
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTA 245
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S T
Sbjct: 119 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 164
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 119
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTA 245
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S A
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA 165
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 76/162 (46%), Gaps = 6/162 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 87
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 88 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 145
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNS 241
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S
Sbjct: 146 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 187
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 122
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTA 245
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S T
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT 168
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 80/150 (53%), Gaps = 6/150 (4%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
LG G G V+ Q+K+ G +A K ++K+ L R A +E++IL + F+
Sbjct: 193 LGRGGFGEVFACQMKA----TGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIV 248
Query: 150 TLYATLDCPRWSCLLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYASEVVVALEFLHMM 207
+L + CL+ GGD+ H+ + + F E FY +++V LE LH
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 208 GIIYRDLKPENVLVRSDGHIMLTDFDLSLK 237
IIYRDLKPENVL+ DG++ ++D L+++
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVE 338
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 78/146 (53%), Gaps = 13/146 (8%)
Query: 313 VRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKG----IDHELTLA 368
++ + GT ++APE++ GE + +VD++ LG+ ++E+ PF+ ++++
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ 403
Query: 369 NVVARALEFPKEPSVPGPA-KDLIAQLLVKDPTRRMGSKMGA-TAIKRHQFFNGVNWALL 426
V+ +A+ +P + S PA KD LL KDP +R+G + G+ ++ H F ++W L
Sbjct: 404 RVLEQAVTYPDKFS---PASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQL 460
Query: 427 RCA--KPPFIP--RPVTCRDLTTTNS 448
PPF+P R V +++ +
Sbjct: 461 EAGMLTPPFVPDSRTVYAKNIQDVGA 486
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 80/150 (53%), Gaps = 6/150 (4%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
LG G G V+ Q+K+ G +A K ++K+ L R A +E++IL + F+
Sbjct: 193 LGRGGFGEVFACQMKA----TGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIV 248
Query: 150 TLYATLDCPRWSCLLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYASEVVVALEFLHMM 207
+L + CL+ GGD+ H+ + + F E FY +++V LE LH
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 208 GIIYRDLKPENVLVRSDGHIMLTDFDLSLK 237
IIYRDLKPENVL+ DG++ ++D L+++
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVE 338
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 78/146 (53%), Gaps = 13/146 (8%)
Query: 313 VRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKG----IDHELTLA 368
++ + GT ++APE++ GE + +VD++ LG+ ++E+ PF+ ++++
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ 403
Query: 369 NVVARALEFPKEPSVPGPA-KDLIAQLLVKDPTRRMGSKMGA-TAIKRHQFFNGVNWALL 426
V+ +A+ +P + S PA KD LL KDP +R+G + G+ ++ H F ++W L
Sbjct: 404 RVLEQAVTYPDKFS---PASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQL 460
Query: 427 RCA--KPPFIP--RPVTCRDLTTTNS 448
PPF+P R V +++ +
Sbjct: 461 EAGMLTPPFVPDSRTVYAKNIQDVGA 486
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 80/150 (53%), Gaps = 6/150 (4%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
LG G G V+ Q+K+ G +A K ++K+ L R A +E++IL + F+
Sbjct: 193 LGRGGFGEVFACQMKA----TGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIV 248
Query: 150 TLYATLDCPRWSCLLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYASEVVVALEFLHMM 207
+L + CL+ GGD+ H+ + + F E FY +++V LE LH
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 208 GIIYRDLKPENVLVRSDGHIMLTDFDLSLK 237
IIYRDLKPENVL+ DG++ ++D L+++
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVE 338
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 78/146 (53%), Gaps = 13/146 (8%)
Query: 313 VRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKG----IDHELTLA 368
++ + GT ++APE++ GE + +VD++ LG+ ++E+ PF+ ++++
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ 403
Query: 369 NVVARALEFPKEPSVPGPA-KDLIAQLLVKDPTRRMGSKMGA-TAIKRHQFFNGVNWALL 426
V+ +A+ +P + S PA KD LL KDP +R+G + G+ ++ H F ++W L
Sbjct: 404 RVLEQAVTYPDKFS---PASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQL 460
Query: 427 RCA--KPPFIP--RPVTCRDLTTTNS 448
PPF+P R V +++ +
Sbjct: 461 EAGMLTPPFVPDSRTVYAKNIQDVGA 486
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 122/299 (40%), Gaps = 78/299 (26%)
Query: 110 NGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCP 169
G +AAK+++ ++L +R+ + R E I +L H + L+ ++ + L+ +
Sbjct: 28 TGHEYAAKIINTKKLSARDHQKLER-EARICRLLKHSNIVRLHDSISEEGFHYLVFDLVT 86
Query: 170 GGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD---GH 226
GG+L + + E+ +++ A+ H MG+++RDLKPEN+L+ S
Sbjct: 87 GGEL--FEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAA 144
Query: 227 IMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIVPAVS 286
+ L DF L+++ GDQ Q FG +
Sbjct: 145 VKLADFGLAIE----------------VQGDQ--------QAWFGFA------------- 167
Query: 287 CLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGI 346
G PG YL+PE++ E +G VD W G+
Sbjct: 168 ------------GTPG---------------------YLSPEVLRKEAYGKPVDIWACGV 194
Query: 347 FIFELFYGTTPFKGIDHELTLANVVARALEF--PKEPSVPGPAKDLIAQLLVKDPTRRM 403
++ L G PF D + A A +F P+ +V AK+LI Q+L +P +R+
Sbjct: 195 ILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRI 253
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 80/150 (53%), Gaps = 6/150 (4%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
LG G G V+ Q+K+ G +A K ++K+ L R A +E++IL + F+
Sbjct: 193 LGRGGFGEVFACQMKA----TGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIV 248
Query: 150 TLYATLDCPRWSCLLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYASEVVVALEFLHMM 207
+L + CL+ GGD+ H+ + + F E FY +++V LE LH
Sbjct: 249 SLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308
Query: 208 GIIYRDLKPENVLVRSDGHIMLTDFDLSLK 237
IIYRDLKPENVL+ DG++ ++D L+++
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVE 338
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 72/131 (54%), Gaps = 11/131 (8%)
Query: 313 VRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKG----IDHELTLA 368
++ + GT ++APE++ GE + +VD++ LG+ ++E+ PF+ ++++
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ 403
Query: 369 NVVARALEFPKEPSVPGPA-KDLIAQLLVKDPTRRMGSKMGAT-AIKRHQFFNGVNWALL 426
V+ +A+ +P + S PA KD LL KDP +R+G + G+ ++ H F ++W L
Sbjct: 404 RVLEQAVTYPDKFS---PASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQL 460
Query: 427 RCA--KPPFIP 435
PPF+P
Sbjct: 461 EAGMLTPPFVP 471
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 6/162 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 66
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G+ V ++ Q +F E Y +E+
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPRGE--VYKELQKLSKFDEQRTATYITELAN 124
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNS 241
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 166
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 314 RSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVAR 373
R GT +YL PE+I G H VD W+LG+ +E G PF+ ++ T +
Sbjct: 167 RRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
Query: 374 ALEFPKEPSVPGPAKDLIAQLLVKDPTRR 402
FP V A+DLI++LL +P++R
Sbjct: 227 EFTFPD--FVTEGARDLISRLLKHNPSQR 253
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 76/162 (46%), Gaps = 6/162 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 63
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 64 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 121
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNS 241
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 163
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 76/165 (46%), Gaps = 6/165 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 62
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 63 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 120
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTST 244
AL + H +I+RD+KPEN+L+ S G + + DF S +S T
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRT 165
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 76/162 (46%), Gaps = 6/162 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 62
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 63 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 120
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNS 241
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 76/162 (46%), Gaps = 6/162 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 122
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNS 241
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 164
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 76/162 (46%), Gaps = 6/162 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 119
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNS 241
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 161
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 63
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 64 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 121
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTA 245
AL + H +I+RD+KPEN+L+ S G + + +F S+ +S T
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT 167
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 122
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTA 245
AL + H +I+RD+KPEN+L+ S G + + +F S+ +S T
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT 168
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 76/162 (46%), Gaps = 6/162 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
L D LG G G+VYL ++ + A KV+ K +L E + R E EI
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYL----AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY L+ E+ P G V R+ Q +F E Y +E+
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELAN 122
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNS 241
AL + H +I+RD+KPEN+L+ S G + + DF S+ +S
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 164
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 313 VRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVA 372
+R + GT +YL PE+I G H VD W +G+ +EL G PF+ H T +V
Sbjct: 176 LRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVK 235
Query: 373 RALEFPKEPSVPGPAKDLIAQLLVKDPTRRM 403
L+FP SVP A+DLI++LL +P+ R+
Sbjct: 236 VDLKFP--ASVPTGAQDLISKLLRHNPSERL 264
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
T+ D LG G G+VYL ++ + A KV+ K ++ E + R E E
Sbjct: 20 FTIDDFEIGRPLGKGKFGNVYL----AREKKSHFIVALKVLFKSQIEKEGVEHQLRREIE 75
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
I L HP + LY R L+ E+ P G+L+ ++ Q F E E+
Sbjct: 76 IQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELY--KELQKSCTFDEQRTATIMEELA 133
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSL 236
AL + H +I+RD+KPEN+L+ G + + DF S+
Sbjct: 134 DALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSV 171
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
F LG+G V L + K+ G FA K + K+ L + KES E +L +
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKA----TGKLFAVKCIPKKAL--KGKESSIENEIAVLRKI 77
Query: 144 DHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFH-ESAVRFYASEVVVALE 202
H + L + P L+ + GG+L R +K F+ E +V+ A+
Sbjct: 78 KHENIVALEDIYESPNHLYLVMQLVSGGELF---DRIVEKGFYTEKDASTLIRQVLDAVY 134
Query: 203 FLHMMGIIYRDLKPENVLVRS---DGHIMLTDFDLSL---KGDNSTSTAQLVSDQSPPTG 256
+LH MGI++RDLKPEN+L S + IM++DF LS KGD ++ +P
Sbjct: 135 YLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVL 194
Query: 257 DQQPNDCAVDQPPFGNSSCII 277
Q+P AVD G + I+
Sbjct: 195 AQKPYSKAVDCWSIGVIAYIL 215
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 320 GTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF-- 377
GT Y+APE+++ + + AVD W++G+ + L G PF + ++ EF
Sbjct: 184 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDS 243
Query: 378 PKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFNG 420
P + AKD I L+ KDP +R + A RH + G
Sbjct: 244 PYWDDISDSAKDFIRNLMEKDPNKRYTCEQAA----RHPWIAG 282
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 130/325 (40%), Gaps = 83/325 (25%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI- 139
+ + + V LG G G V L + + G A K+++K+ L + + RIEREI
Sbjct: 13 IGNYQIVKTLGEGSFGKVKL----AYHTTTGQKVALKIINKKVLAKSDMQ--GRIEREIS 66
Query: 140 -LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
L +L HP + LY + ++ E+ + QR DK + A RF+ +++
Sbjct: 67 YLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFF-QQII 123
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQ 258
A+E+ H I++RDLKPEN+L+ ++ + DF LS +++D +
Sbjct: 124 SAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS----------NIMTDGN------ 167
Query: 259 QPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSF 318
F +SC PN PE+++ L
Sbjct: 168 -----------FLKTSCGSPNY---------------------AAPEVISGKL------- 188
Query: 319 VGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFP 378
Y PE VD W+ G+ ++ + PF + N+ P
Sbjct: 189 -----YAGPE----------VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 233
Query: 379 KEPSVPGPAKDLIAQLLVKDPTRRM 403
K S PG A LI ++L+ +P R+
Sbjct: 234 KFLS-PGAA-GLIKRMLIVNPLNRI 256
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 130/325 (40%), Gaps = 83/325 (25%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI- 139
+ + + V LG G G V L + + G A K+++K+ L + + RIEREI
Sbjct: 12 IGNYQIVKTLGEGSFGKVKL----AYHTTTGQKVALKIINKKVLAKSDMQ--GRIEREIS 65
Query: 140 -LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
L +L HP + LY + ++ E+ + QR DK + A RF+ +++
Sbjct: 66 YLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFF-QQII 122
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQ 258
A+E+ H I++RDLKPEN+L+ ++ + DF LS +++D +
Sbjct: 123 SAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS----------NIMTDGN------ 166
Query: 259 QPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSF 318
F +SC PN PE+++ L
Sbjct: 167 -----------FLKTSCGSPNY---------------------AAPEVISGKL------- 187
Query: 319 VGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFP 378
Y PE VD W+ G+ ++ + PF + N+ P
Sbjct: 188 -----YAGPE----------VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 232
Query: 379 KEPSVPGPAKDLIAQLLVKDPTRRM 403
K S PG A LI ++L+ +P R+
Sbjct: 233 KFLS-PGAA-GLIKRMLIVNPLNRI 255
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 130/325 (40%), Gaps = 83/325 (25%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI- 139
+ + + V LG G G V L + + G A K+++K+ L + + RIEREI
Sbjct: 7 IGNYQIVKTLGEGSFGKVKL----AYHTTTGQKVALKIINKKVLAKSDMQ--GRIEREIS 60
Query: 140 -LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
L +L HP + LY + ++ E+ + QR DK + A RF+ +++
Sbjct: 61 YLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFF-QQII 117
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQ 258
A+E+ H I++RDLKPEN+L+ ++ + DF LS +++D +
Sbjct: 118 SAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS----------NIMTDGN------ 161
Query: 259 QPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSF 318
F +SC PN PE+++ L
Sbjct: 162 -----------FLKTSCGSPNY---------------------AAPEVISGKL------- 182
Query: 319 VGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFP 378
Y PE VD W+ G+ ++ + PF + N+ P
Sbjct: 183 -----YAGPE----------VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 227
Query: 379 KEPSVPGPAKDLIAQLLVKDPTRRM 403
K S PG A LI ++L+ +P R+
Sbjct: 228 KFLS-PGAA-GLIKRMLIVNPLNRI 250
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 130/325 (40%), Gaps = 83/325 (25%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI- 139
+ + + V LG G G V L + + G A K+++K+ L + + RIEREI
Sbjct: 3 IGNYQIVKTLGEGSFGKVKL----AYHTTTGQKVALKIINKKVLAKSDMQ--GRIEREIS 56
Query: 140 -LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
L +L HP + LY + ++ E+ + QR DK + A RF+ +++
Sbjct: 57 YLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFF-QQII 113
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQ 258
A+E+ H I++RDLKPEN+L+ ++ + DF LS +++D +
Sbjct: 114 SAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS----------NIMTDGN------ 157
Query: 259 QPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSF 318
F +SC PN PE+++ L
Sbjct: 158 -----------FLKTSCGSPNY---------------------AAPEVISGKL------- 178
Query: 319 VGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFP 378
Y PE VD W+ G+ ++ + PF + N+ P
Sbjct: 179 -----YAGPE----------VDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 223
Query: 379 KEPSVPGPAKDLIAQLLVKDPTRRM 403
K S PG A LI ++L+ +P R+
Sbjct: 224 KFLS-PGAA-GLIKRMLIVNPLNRI 246
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 11/150 (7%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSR-NKESRARIEREILEMLDHPFL 148
LG G G V L K K + C A KV+ KR++ + +KES R E ++L+ LDHP +
Sbjct: 57 LGKGSFGEVILC--KDKITGQEC--AVKVISKRQVKQKTDKESLLR-EVQLLKQLDHPNI 111
Query: 149 PTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMG 208
LY + + L+ E GG+L + KRF E +V+ + ++H
Sbjct: 112 MKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 169
Query: 209 IIYRDLKPENVLVRS---DGHIMLTDFDLS 235
I++RDLKPEN+L+ S D +I + DF LS
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLS 199
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 319 VGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVV--ARALE 376
+GT Y+APE++ G + D W+ G+ ++ L G PF G + L V E
Sbjct: 212 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 270
Query: 377 FPKEPSVPGPAKDLIAQLLVKDPTRRMGSK 406
P+ V AKDLI ++L P+ R+ ++
Sbjct: 271 LPQWKKVSESAKDLIRKMLTYVPSMRISAR 300
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 11/150 (7%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSR-NKESRARIEREILEMLDHPFL 148
LG G G V L K K + C A KV+ KR++ + +KES R E ++L+ LDHP +
Sbjct: 58 LGKGSFGEVILC--KDKITGQEC--AVKVISKRQVKQKTDKESLLR-EVQLLKQLDHPNI 112
Query: 149 PTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMG 208
LY + + L+ E GG+L + KRF E +V+ + ++H
Sbjct: 113 MKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 170
Query: 209 IIYRDLKPENVLVRS---DGHIMLTDFDLS 235
I++RDLKPEN+L+ S D +I + DF LS
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLS 200
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 319 VGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVV--ARALE 376
+GT Y+APE++ G + D W+ G+ ++ L G PF G + L V E
Sbjct: 213 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 271
Query: 377 FPKEPSVPGPAKDLIAQLLVKDPTRRMGSK 406
P+ V AKDLI ++L P+ R+ ++
Sbjct: 272 LPQWKKVSESAKDLIRKMLTYVPSMRISAR 301
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 11/150 (7%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSR-NKESRARIEREILEMLDHPFL 148
LG G G V L K K + C A KV+ KR++ + +KES R E ++L+ LDHP +
Sbjct: 40 LGKGSFGEVILC--KDKITGQEC--AVKVISKRQVKQKTDKESLLR-EVQLLKQLDHPNI 94
Query: 149 PTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMG 208
LY + + L+ E GG+L + KRF E +V+ + ++H
Sbjct: 95 MKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 152
Query: 209 IIYRDLKPENVLVRS---DGHIMLTDFDLS 235
I++RDLKPEN+L+ S D +I + DF LS
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRIIDFGLS 182
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 319 VGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVV--ARALE 376
+GT Y+APE++ G + D W+ G+ ++ L G PF G + L V E
Sbjct: 195 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 253
Query: 377 FPKEPSVPGPAKDLIAQLLVKDPTRRMGSK 406
P+ V AKDLI ++L P+ R+ ++
Sbjct: 254 LPQWKKVSESAKDLIRKMLTYVPSMRISAR 283
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 11/150 (7%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSR-NKESRARIEREILEMLDHPFL 148
LG G G V L K K + C A KV+ KR++ + +KES R E ++L+ LDHP +
Sbjct: 34 LGKGSFGEVILC--KDKITGQEC--AVKVISKRQVKQKTDKESLLR-EVQLLKQLDHPNI 88
Query: 149 PTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMG 208
LY + + L+ E GG+L + KRF E +V+ + ++H
Sbjct: 89 MKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 146
Query: 209 IIYRDLKPENVLVRS---DGHIMLTDFDLS 235
I++RDLKPEN+L+ S D +I + DF LS
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLS 176
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 319 VGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVV--ARALE 376
+GT Y+APE++ G + D W+ G+ ++ L G PF G + L V E
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 377 FPKEPSVPGPAKDLIAQLLVKDPTRRMGSK 406
P+ V AKDLI ++L P+ R+ ++
Sbjct: 248 LPQWKKVSESAKDLIRKMLTYVPSMRISAR 277
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 72/156 (46%), Gaps = 12/156 (7%)
Query: 85 RFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLD 144
+ LG G G VY K+++ AAKV+D + S + +E +IL D
Sbjct: 40 EIIGELGDGAFGKVY----KAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCD 92
Query: 145 HPFLPTLYATLDCPRWSCLLTEFCPGG--DLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
HP + L +L EFC GG D +L +P ES ++ + + AL
Sbjct: 93 HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALN 149
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKG 238
+LH II+RDLK N+L DG I L DF +S K
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKN 185
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 314 RSMSFVGTHEYLAPEIISGEG-----HGNAVDWWTLGIFIFEL 351
R SF+GT ++APE++ E + D W+LGI + E+
Sbjct: 191 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 72/156 (46%), Gaps = 12/156 (7%)
Query: 85 RFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLD 144
+ LG G G VY K+++ AAKV+D + S + +E +IL D
Sbjct: 40 EIIGELGDGAFGKVY----KAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCD 92
Query: 145 HPFLPTLYATLDCPRWSCLLTEFCPGG--DLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
HP + L +L EFC GG D +L +P ES ++ + + AL
Sbjct: 93 HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALN 149
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKG 238
+LH II+RDLK N+L DG I L DF +S K
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKN 185
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 314 RSMSFVGTHEYLAPEIISGEG-----HGNAVDWWTLGIFIFEL 351
R SF+GT ++APE++ E + D W+LGI + E+
Sbjct: 191 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 72/156 (46%), Gaps = 12/156 (7%)
Query: 85 RFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLD 144
+ LG G G VY K+++ AAKV+D + S + +E +IL D
Sbjct: 40 EIIGELGDGAFGKVY----KAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCD 92
Query: 145 HPFLPTLYATLDCPRWSCLLTEFCPGG--DLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
HP + L +L EFC GG D +L +P ES ++ + + AL
Sbjct: 93 HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALN 149
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKG 238
+LH II+RDLK N+L DG I L DF +S K
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKN 185
Score = 28.5 bits (62), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 314 RSMSFVGTHEYLAPEIISGEG-----HGNAVDWWTLGIFIFEL 351
R F+GT ++APE++ E + D W+LGI + E+
Sbjct: 191 RRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSR-NKESRARIEREILEMLDHPFL 148
LG G G V L K K + C A KV+ KR++ + +KES R E ++L+ LDHP +
Sbjct: 34 LGKGSFGEVILC--KDKITGQEC--AVKVISKRQVKQKTDKESLLR-EVQLLKQLDHPNI 88
Query: 149 PTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMG 208
LY + + L+ E GG+L + KRF E +V+ + + H
Sbjct: 89 XKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITYXHKNK 146
Query: 209 IIYRDLKPENVLVRS---DGHIMLTDFDLS 235
I++RDLKPEN+L+ S D +I + DF LS
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLS 176
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 319 VGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVV--ARALE 376
+GT Y+APE++ G + D W+ G+ ++ L G PF G + L V E
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 377 FPKEPSVPGPAKDLIAQLLVKDPTRRMGSK 406
P+ V AKDLI + L P+ R+ ++
Sbjct: 248 LPQWKKVSESAKDLIRKXLTYVPSXRISAR 277
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 135/335 (40%), Gaps = 93/335 (27%)
Query: 90 LGSGDIGSVYL-VQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI--LEMLDHP 146
LG G G V L K++ F + +++ K ++ R+EREI L++L HP
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDM-------HMRVEREISYLKLLRHP 69
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ LY + P ++ E+ G + ++ KR E R + +++ A+E+ H
Sbjct: 70 HIIKLYDVITTPTDIVMVIEYAGGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHR 126
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVD 266
I++RDLKPEN+L+ + ++ + DF LS +++D +
Sbjct: 127 HKIVHRDLKPENLLLDDNLNVKIADFGLS----------NIMTDGN-------------- 162
Query: 267 QPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLA 326
F +SC PN PE++ L Y
Sbjct: 163 ---FLKTSCGSPNY---------------------AAPEVINGKL------------YAG 186
Query: 327 PEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHEL--TLANVVARALEFPKEPSVP 384
PE VD W+ GI ++ + G PF D E L V + + P
Sbjct: 187 PE----------VDVWSCGIVLYVMLVGRLPF---DDEFIPNLFKKVNSCVYVMPDFLSP 233
Query: 385 GPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFN 419
G A+ LI +++V DP +R+ + I+R +FN
Sbjct: 234 G-AQSLIRRMIVADPMQRITIQ----EIRRDPWFN 263
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 7/156 (4%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ D + + LG G VY +++S + G A K++DK+ + R + E +I
Sbjct: 10 IEDFKVGNLLGKGSFAGVY----RAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLH-VLRQRQPDKRFHESAVRFYASEVVV 199
L HP + LY + + L+ E C G+++ L+ R K F E+ R + +++
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV--KPFSENEARHFMHQIIT 123
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +LH GI++RDL N+L+ + +I + DF L+
Sbjct: 124 GMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLA 159
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 284 AVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWT 343
+S L R K+ + G + P + + + GT Y++PEI + HG D W+
Sbjct: 139 TLSNLLLTRNMNIKIADFGLATQLKMPHE-KHYTLCGTPNYISPEIATRSAHGLESDVWS 197
Query: 344 LGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRM 403
LG + L G PF + TL VV E P S+ AKDLI QLL ++P R+
Sbjct: 198 LGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSI--EAKDLIHQLLRRNPADRL 255
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 112/300 (37%), Gaps = 72/300 (24%)
Query: 109 NNGCFFAAKVMDKRELVSRNKESRARIERE--ILEMLDHPFLPTLYATLDCPRWSCLLTE 166
G FA K++D + S S ++RE I ML HP + L T ++ E
Sbjct: 49 ETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFE 108
Query: 167 FCPGGDL--HVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD 224
F G DL ++++ + E+ Y +++ AL + H II+RD+KP VL+ S
Sbjct: 109 FMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLAS- 167
Query: 225 GHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIVPA 284
+ N V FG + + + +V
Sbjct: 168 ----------------------------------KENSAPVKLGGFGVAIQLGESGLVAG 193
Query: 285 VSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTL 344
G GTP +A PE++ E +G VD W
Sbjct: 194 --------------GRVGTPHFMA------------------PEVVKREPYGKPVDVWGC 221
Query: 345 GIFIFELFYGTTPFKGIDHELTLANVVARALEFPKEPS-VPGPAKDLIAQLLVKDPTRRM 403
G+ +F L G PF G L + + P++ S + AKDL+ ++L+ DP R+
Sbjct: 222 GVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERI 281
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 112/300 (37%), Gaps = 72/300 (24%)
Query: 109 NNGCFFAAKVMDKRELVSRNKESRARIERE--ILEMLDHPFLPTLYATLDCPRWSCLLTE 166
G FA K++D + S S ++RE I ML HP + L T ++ E
Sbjct: 47 ETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFE 106
Query: 167 FCPGGDL--HVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD 224
F G DL ++++ + E+ Y +++ AL + H II+RD+KP VL+ S
Sbjct: 107 FMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLAS- 165
Query: 225 GHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIVPA 284
+ N V FG + + + +V
Sbjct: 166 ----------------------------------KENSAPVKLGGFGVAIQLGESGLVAG 191
Query: 285 VSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTL 344
G GTP +A PE++ E +G VD W
Sbjct: 192 --------------GRVGTPHFMA------------------PEVVKREPYGKPVDVWGC 219
Query: 345 GIFIFELFYGTTPFKGIDHELTLANVVARALEFPKEPS-VPGPAKDLIAQLLVKDPTRRM 403
G+ +F L G PF G L + + P++ S + AKDL+ ++L+ DP R+
Sbjct: 220 GVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERI 279
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 70/148 (47%), Gaps = 12/148 (8%)
Query: 93 GDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLPTLY 152
GD G VY K+++ AAKV+D + S + +E +IL DHP + L
Sbjct: 21 GDFGKVY----KAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLL 73
Query: 153 ATLDCPRWSCLLTEFCPGG--DLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGII 210
+L EFC GG D +L +P ES ++ + + AL +LH II
Sbjct: 74 DAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLHDNKII 130
Query: 211 YRDLKPENVLVRSDGHIMLTDFDLSLKG 238
+RDLK N+L DG I L DF +S K
Sbjct: 131 HRDLKAGNILFTLDGDIKLADFGVSAKN 158
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 314 RSMSFVGTHEYLAPEIISGEG-----HGNAVDWWTLGIFIFEL 351
R SF+GT ++APE++ E + D W+LGI + E+
Sbjct: 165 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 127/330 (38%), Gaps = 82/330 (24%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
LG G G V + K G A K+++++++ S + + R E + L++ HP +
Sbjct: 24 LGVGTFGKVKV----GKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHII 79
Query: 150 TLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGI 209
LY + P ++ E+ GG+L + R E R +++ +++ H +
Sbjct: 80 KLYQVISTPSDIFMVMEYVSGGEL--FDYICKNGRLDEKESRRLFQQILSGVDYCHRHMV 137
Query: 210 IYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQPP 269
++RDLKPENVL+ + + + DF LS ++SD
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLS----------NMMSDGE----------------- 170
Query: 270 FGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEI 329
F SC PN PE+++ L Y PE
Sbjct: 171 FLRXSCGSPNY---------------------AAPEVISGRL------------YAGPE- 196
Query: 330 ISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKD 389
VD W+ G+ ++ L GT PF DH TL + + + + P
Sbjct: 197 ---------VDIWSSGVILYALLCGTLPFDD-DHVPTLFKKICDGIFYTPQYLNPS-VIS 245
Query: 390 LIAQLLVKDPTRRMGSKMGATAIKRHQFFN 419
L+ +L DP +R K I+ H++F
Sbjct: 246 LLKHMLQVDPMKRATIK----DIREHEWFK 271
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 73/155 (47%), Gaps = 15/155 (9%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
V +LGSG G V L K G A K++ K + + + E +L+ LDHP
Sbjct: 9 VKKLGSGAYGEVLLC----KDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHP 64
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLH---VLRQRQPDKRFHESAVRFYASEVVVALEF 203
+ LY + R L+ E GG+L +LRQ+ F E +V+ +
Sbjct: 65 NIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAVIMKQVLSGTTY 119
Query: 204 LHMMGIIYRDLKPENVLVRS---DGHIMLTDFDLS 235
LH I++RDLKPEN+L+ S D I + DF LS
Sbjct: 120 LHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 154
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 319 VGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF- 377
+GT Y+APE++ + + D W+ G+ ++ L G PF G + L V F
Sbjct: 167 LGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 225
Query: 378 -PKEPSVPGPAKDLIAQLLVKDPTRRMGSK 406
P V AK L+ +L +P++R+ ++
Sbjct: 226 PPDWTQVSDEAKQLVKLMLTYEPSKRISAE 255
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 73/155 (47%), Gaps = 15/155 (9%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
V +LGSG G V L K G A K++ K + + + E +L+ LDHP
Sbjct: 26 VKKLGSGAYGEVLLC----KDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHP 81
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLH---VLRQRQPDKRFHESAVRFYASEVVVALEF 203
+ LY + R L+ E GG+L +LRQ+ F E +V+ +
Sbjct: 82 NIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAVIMKQVLSGTTY 136
Query: 204 LHMMGIIYRDLKPENVLVRS---DGHIMLTDFDLS 235
LH I++RDLKPEN+L+ S D I + DF LS
Sbjct: 137 LHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 171
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 319 VGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF- 377
+GT Y+APE++ + + D W+ G+ ++ L G PF G + L V F
Sbjct: 184 LGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 242
Query: 378 -PKEPSVPGPAKDLIAQLLVKDPTRRMGSK 406
P V AK L+ +L +P++R+ ++
Sbjct: 243 PPDWTQVSDEAKQLVKLMLTYEPSKRISAE 272
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ + R + +G G+ V L ++ G A K++DK +L S + + R E I+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKL----ARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIM 67
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
++L+HP + L+ ++ + L+ E+ GG+ V R E R ++V A
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGE--VFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+++ H I++RDLK EN+L+ +D +I + DF S
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 317 SFVGTHEYLAPEIISGEGH-GNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARAL 375
+F G+ Y APE+ G+ + G VD W+LG+ ++ L G+ PF G + + V+
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 376 EFPKEPSVPGPAKDLIAQLLVKDPTRR 402
P S ++L+ + L+ +P++R
Sbjct: 231 RIPFYMST--DCENLLKKFLILNPSKR 255
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ + R + +G G+ V L ++ G A K++DK +L S + + R E I+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKL----ARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIM 67
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
++L+HP + L+ ++ + L+ E+ GG+ V R E R ++V A
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGE--VFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+++ H I++RDLK EN+L+ +D +I + DF S
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 317 SFVGTHEYLAPEIISGEGH-GNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARAL 375
+F G Y APE+ G+ + G VD W+LG+ ++ L G+ PF G + + V+
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 376 EFPKEPSVPGPAKDLIAQLLVKDPTRR 402
P S ++L+ + L+ +P++R
Sbjct: 231 RIPFYMST--DCENLLKKFLILNPSKR 255
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ + R + +G G+ V L ++ G A K++DK +L S + + R E I+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKL----ARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIM 67
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
++L+HP + L+ ++ + L+ E+ GG+ V R E R ++V A
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGE--VFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+++ H I++RDLK EN+L+ +D +I + DF S
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 317 SFVGTHEYLAPEIISGEGH-GNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARAL 375
+F G+ Y APE+ G+ + G VD W+LG+ ++ L G+ PF G + + V+
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 376 EFPKEPSVPGPAKDLIAQLLVKDPTRR 402
P S ++L+ + L+ +P++R
Sbjct: 231 RIPFYMST--DCENLLKKFLILNPSKR 255
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 317 SFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALE 376
+ GT E++APEI++ E G D W++G+ + L G +PF G + TL N+ A +
Sbjct: 170 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD 229
Query: 377 FPKE--PSVPGPAKDLIAQLLVKDPTRRM 403
F +E + AKD I +LLVKDP RRM
Sbjct: 230 FDEEYFSNTSELAKDFIRRLLVKDPKRRM 258
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVS-RNKESRARIERE--ILEMLDHP 146
LGSG V K + G +AAK + KR L S R SR IERE IL + HP
Sbjct: 13 LGSGQFAIVR----KCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHP 68
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLH-VLRQRQPDKRFHESAVRFYASEVVVALEFLH 205
+ TL+ + L+ E GG+L L +++ E + +++ + +LH
Sbjct: 69 NIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVHYLH 125
Query: 206 MMGIIYRDLKPENVLVRSDG----HIMLTDFDLSLK 237
I + DLKPEN+++ I L DF ++ K
Sbjct: 126 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 320 GTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPK 379
GT E++APEI++ E G D W++G+ + L G +PF G + TL N+ A +F +
Sbjct: 194 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 253
Query: 380 E--PSVPGPAKDLIAQLLVKDPTRRM 403
E + AKD I +LLVKDP RRM
Sbjct: 254 EYFSNTSELAKDFIRRLLVKDPKRRM 279
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVS-RNKESRARIERE--ILEMLDHP 146
LGSG V K + G +AAK + KR L S R SR IERE IL + HP
Sbjct: 34 LGSGQFAIVR----KCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHP 89
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLH-VLRQRQPDKRFHESAVRFYASEVVVALEFLH 205
+ TL+ + L+ E GG+L L +++ E + +++ + +LH
Sbjct: 90 NIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVHYLH 146
Query: 206 MMGIIYRDLKPENVLVRSDG----HIMLTDFDLSLK 237
I + DLKPEN+++ I L DF ++ K
Sbjct: 147 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 182
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 320 GTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPK 379
GT E++APEI++ E G D W++G+ + L G +PF G + TL N+ A +F +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 239
Query: 380 E--PSVPGPAKDLIAQLLVKDPTRRM 403
E + AKD I +LLVKDP RRM
Sbjct: 240 EYFSNTSELAKDFIRRLLVKDPKRRM 265
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVS-RNKESRARIERE--ILEMLDHP 146
LGSG V K + G +AAK + KR L S R SR IERE IL + HP
Sbjct: 20 LGSGQFAIVR----KCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHP 75
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLH-VLRQRQPDKRFHESAVRFYASEVVVALEFLH 205
+ TL+ + L+ E GG+L L +++ E + +++ + +LH
Sbjct: 76 NIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVHYLH 132
Query: 206 MMGIIYRDLKPENVLVRSDG----HIMLTDFDLSLK 237
I + DLKPEN+++ I L DF ++ K
Sbjct: 133 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 168
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ + R + +G G+ V L ++ G A +++DK +L S + + R E I+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKL----ARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIM 67
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
++L+HP + L+ ++ + L+ E+ GG+ V R E R ++V A
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGE--VFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+++ H I++RDLK EN+L+ +D +I + DF S
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 317 SFVGTHEYLAPEIISGEGH-GNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARAL 375
+F G+ Y APE+ G+ + G VD W+LG+ ++ L G+ PF G + + V+
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 376 EFPKEPSVPGPAKDLIAQLLVKDPTRR 402
P S ++L+ + L+ +P++R
Sbjct: 231 RIPFYMST--DCENLLKKFLILNPSKR 255
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 7/155 (4%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ + R + +G G+ V L ++ G A K++DK +L S + + R E I
Sbjct: 13 IGNYRLLKTIGKGNFAKVKL----ARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIX 67
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
++L+HP + L+ ++ + L+ E+ GG+ V R E R ++V A
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVXEYASGGE--VFDYLVAHGRXKEKEARAKFRQIVSA 125
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+++ H I++RDLK EN+L+ +D +I + DF S
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFS 160
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 317 SFVGTHEYLAPEIISGEGH-GNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARAL 375
+F G Y APE+ G+ + G VD W+LG+ ++ L G+ PF G + + V+
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 376 EFPKEPSVPGPAKDLIAQLLVKDPTRR 402
P S ++L+ + L+ +P++R
Sbjct: 231 RIPFYXST--DCENLLKKFLILNPSKR 255
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 11/157 (7%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE-- 138
+ + R + +G G+ V L ++ G A K++DK +L N S ++ RE
Sbjct: 14 IGNYRLLKTIGKGNFAKVKL----ARHILTGREVAIKIIDKTQL---NPTSLQKLFREVR 66
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
I+++L+HP + L+ ++ + L+ E+ GG+ V R E R ++V
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGE--VFDYLVAHGRMKEKEARSKFRQIV 124
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
A+++ H I++RDLK EN+L+ +D +I + DF S
Sbjct: 125 SAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS 161
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 317 SFVGTHEYLAPEIISGEGH-GNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARAL 375
+F G Y APE+ G+ + G VD W+LG+ ++ L G+ PF G + + V+
Sbjct: 172 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 231
Query: 376 EFPKEPSVPGPAKDLIAQLLVKDPTRR 402
P S ++L+ + LV +P +R
Sbjct: 232 RIPFYMST--DCENLLKRFLVLNPIKR 256
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ + R + +G G+ V L ++ G A +++DK +L S + + R E I+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKL----ARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIM 67
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
++L+HP + L+ ++ + L+ E+ GG+ V R E R ++V A
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGE--VFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+++ H I++RDLK EN+L+ +D +I + DF S
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 318 FVGTHEYLAPEIISGEGH-GNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALE 376
F G+ Y APE+ G+ + G VD W+LG+ ++ L G+ PF G + + V+
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 377 FPKEPSVPGPAKDLIAQLLVKDPTRR 402
P S ++L+ + L+ +P++R
Sbjct: 232 IPFYMST--DCENLLKKFLILNPSKR 255
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 11/157 (7%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE-- 138
+ + R + +G G+ V L ++ G A K++DK +L N S ++ RE
Sbjct: 11 IGNYRLLKTIGKGNFAKVKL----ARHILTGREVAIKIIDKTQL---NPTSLQKLFREVR 63
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
I+++L+HP + L+ ++ + L+ E+ GG+ V R E R ++V
Sbjct: 64 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGE--VFDYLVAHGRMKEKEARSKFRQIV 121
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
A+++ H I++RDLK EN+L+ +D +I + DF S
Sbjct: 122 SAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS 158
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 317 SFVGTHEYLAPEIISGEGH-GNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARAL 375
+F G+ Y APE+ G+ + G VD W+LG+ ++ L G+ PF G + + V+
Sbjct: 169 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 228
Query: 376 EFPKEPSVPGPAKDLIAQLLVKDPTRR 402
P S ++L+ + LV +P +R
Sbjct: 229 RIPFYMST--DCENLLKRFLVLNPIKR 253
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 116/299 (38%), Gaps = 78/299 (26%)
Query: 110 NGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCP 169
G +AAK+++ ++L +R+ + R E I +L HP + L+ ++ + L+ +
Sbjct: 28 TGQEYAAKIINTKKLSARDHQKLER-EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVT 86
Query: 170 GGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGH--- 226
GG+L + + E+ +++ ++ H+ GI++RDLKPEN+L+ S
Sbjct: 87 GGEL--FEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAA 144
Query: 227 IMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIVPAVS 286
+ L DF L+++ GDQQ P +
Sbjct: 145 VKLADFGLAIE----------------VQGDQQAWFGFAGTPGY---------------- 172
Query: 287 CLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGI 346
L P+ RK G P VD W G+
Sbjct: 173 -LSPEVLRKDPYGKP-------------------------------------VDMWACGV 194
Query: 347 FIFELFYGTTPFKGIDHELTLANVVARALEF--PKEPSVPGPAKDLIAQLLVKDPTRRM 403
++ L G PF D + A A +F P+ +V AKDLI ++L +P +R+
Sbjct: 195 ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRI 253
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 116/299 (38%), Gaps = 78/299 (26%)
Query: 110 NGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCP 169
G +AAK+++ ++L +R+ + R E I +L HP + L+ ++ + L+ +
Sbjct: 28 TGQEYAAKIINTKKLSARDHQKLER-EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVT 86
Query: 170 GGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGH--- 226
GG+L + + E+ +++ ++ H+ GI++RDLKPEN+L+ S
Sbjct: 87 GGEL--FEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAA 144
Query: 227 IMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIVPAVS 286
+ L DF L+++ GDQQ P +
Sbjct: 145 VKLADFGLAIE----------------VQGDQQAWFGFAGTPGY---------------- 172
Query: 287 CLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGI 346
L P+ RK G P VD W G+
Sbjct: 173 -LSPEVLRKDPYGKP-------------------------------------VDMWACGV 194
Query: 347 FIFELFYGTTPFKGIDHELTLANVVARALEF--PKEPSVPGPAKDLIAQLLVKDPTRRM 403
++ L G PF D + A A +F P+ +V AKDLI ++L +P +R+
Sbjct: 195 ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRI 253
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 130/332 (39%), Gaps = 86/332 (25%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI--LEMLDHPF 147
LG G G V + + G A K+++++++ R+ + +I+REI L++ HP
Sbjct: 19 LGVGTFGKVKI----GEHQLTGHKVAVKILNRQKI--RSLDVVGKIKREIQNLKLFRHPH 72
Query: 148 LPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMM 207
+ LY + P ++ E+ GG+L + R E R +++ A+++ H
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRH 130
Query: 208 GIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQ 267
+++RDLKPENVL+ + + + DF LS N S + + D
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRD----------------- 169
Query: 268 PPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAP 327
SC P N PE+++ L Y P
Sbjct: 170 ------------------SCGSP---------NYAAPEVISGRL------------YAGP 190
Query: 328 EIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKEPSVPGPA 387
E VD W+ G+ ++ L GT PF +H TL + R F +
Sbjct: 191 E----------VDIWSCGVILYALLCGTLPFDD-EHVPTLFKKI-RGGVFYIPEYLNRSV 238
Query: 388 KDLIAQLLVKDPTRRMGSKMGATAIKRHQFFN 419
L+ +L DP +R K I+ H++F
Sbjct: 239 ATLLMHMLQVDPLKRATIK----DIREHEWFK 266
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 111 GCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPG 170
G A K+MDK L S R + E E L+ L H + LY L+ ++ E+CPG
Sbjct: 35 GEMVAIKIMDKNTLGS--DLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPG 92
Query: 171 GDL--HVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIM 228
G+L +++ Q R E R ++V A+ ++H G +RDLKPEN+L +
Sbjct: 93 GELFDYIISQ----DRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLK 148
Query: 229 LTDFDLSLK 237
L DF L K
Sbjct: 149 LIDFGLCAK 157
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 8/125 (6%)
Query: 312 DVRSMSFVGTHEYLAPEIISGEGH-GNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D + G+ Y APE+I G+ + G+ D W++GI ++ L G PF D+ + L
Sbjct: 163 DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD-DNVMALYKK 221
Query: 371 VARA-LEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVNWALLRCA 429
+ R + PK S L+ Q+L DP +R+ K + N+ + +
Sbjct: 222 IMRGKYDVPKWLSPSSIL--LLQQMLQVDPKKRISMK---NLLNHPWIMQDYNYPVEWQS 276
Query: 430 KPPFI 434
K PFI
Sbjct: 277 KNPFI 281
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 117/298 (39%), Gaps = 78/298 (26%)
Query: 111 GCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPG 170
G +AAK+++ ++L +R+ + R E I +L HP + L+ ++ L+ + G
Sbjct: 47 GQEYAAKIINTKKLSARDHQKLER-EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTG 105
Query: 171 GDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD---GHI 227
G+L + + E+ +++ A+ H MG+++RDLKPEN+L+ S +
Sbjct: 106 GEL--FEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAV 163
Query: 228 MLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIVPAVSC 287
L DF L+++ + G+QQ P +
Sbjct: 164 KLADFGLAIEVE----------------GEQQAWFGFAGTPGY----------------- 190
Query: 288 LHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIF 347
L P+ RK G P VD W G+
Sbjct: 191 LSPEVLRKDPYGKP-------------------------------------VDLWACGVI 213
Query: 348 IFELFYGTTPFKGIDHELTLANVVARALEF--PKEPSVPGPAKDLIAQLLVKDPTRRM 403
++ L G PF D + A A +F P+ +V AKDLI ++L +P++R+
Sbjct: 214 LYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRI 271
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE-- 138
+ + R +G G+ V L ++ G A K++DK +L N S ++ RE
Sbjct: 14 IGNYRLQKTIGKGNFAKVKL----ARHVLTGREVAVKIIDKTQL---NPTSLQKLFREVR 66
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
I+++L+HP + L+ ++ + L+ E+ GG+ V R E R ++V
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLVMEYASGGE--VFDYLVAHGRMKEKEARAKFRQIV 124
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
A+++ H I++RDLK EN+L+ D +I + DF S
Sbjct: 125 SAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFS 161
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 317 SFVGTHEYLAPEIISGEGH-GNAVDWWTLGIFIFELFYGTTPFKG 360
+F G+ Y APE+ G+ + G VD W+LG+ ++ L G+ PF G
Sbjct: 172 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 216
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 132/332 (39%), Gaps = 86/332 (25%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI--LEMLDHPF 147
LG G G V + + G A K+++++++ R+ + +I+REI L++ HP
Sbjct: 19 LGVGTFGKVKI----GEHQLTGHKVAVKILNRQKI--RSLDVVGKIKREIQNLKLFRHPH 72
Query: 148 LPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMM 207
+ LY + P ++ E+ GG+L + R E R +++ A+++ H
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRH 130
Query: 208 GIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQ 267
+++RDLKPENVL+ + + + DF LS ++SD
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLS----------NMMSDGE--------------- 165
Query: 268 PPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAP 327
F +SC PN PE+++ L Y P
Sbjct: 166 --FLRTSCGSPNY---------------------AAPEVISGRL------------YAGP 190
Query: 328 EIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKEPSVPGPA 387
E VD W+ G+ ++ L GT PF +H TL + + + E +
Sbjct: 191 E----------VDIWSCGVILYALLCGTLPFDD-EHVPTLFKKIRGGVFYIPE-YLNRSV 238
Query: 388 KDLIAQLLVKDPTRRMGSKMGATAIKRHQFFN 419
L+ +L DP +R K I+ H++F
Sbjct: 239 ATLLMHMLQVDPLKRATIK----DIREHEWFK 266
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 82/157 (52%), Gaps = 7/157 (4%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L + + R + +G G+ V L ++ G A K++DK +L S + + R E
Sbjct: 4 LHIGNYRLLKTIGKGNFAKVKL----ARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVR 58
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
I+++L+HP + L+ ++ + L+ E+ GG++ + E+ +F ++V
Sbjct: 59 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKF--RQIV 116
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
A+++ H I++RDLK EN+L+ +D +I + DF S
Sbjct: 117 SAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS 153
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 317 SFVGTHEYLAPEIISGEGH-GNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARAL 375
+F G+ Y APE+ G+ + G VD W+LG+ ++ L G+ PF G + + V+
Sbjct: 164 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 223
Query: 376 EFPKEPSVPGPAKDLIAQLLVKDPTRR 402
P S ++L+ + L+ +P++R
Sbjct: 224 RIPFYMST--DCENLLKKFLILNPSKR 248
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 19/162 (11%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKREL-VSRNKESRARIER-------- 137
V +LGSG G V L + K+ S A KV+ K + R + IE+
Sbjct: 41 VRKLGSGAYGEVLLCKEKNGHSEK----AIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNE 96
Query: 138 -EILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASE 196
+L+ LDHP + L+ + ++ L+TEF GG+L Q +F E +
Sbjct: 97 ISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL--FEQIINRHKFDECDAANIMKQ 154
Query: 197 VVVALEFLHMMGIIYRDLKPENVLVRSDG---HIMLTDFDLS 235
++ + +LH I++RD+KPEN+L+ + +I + DF LS
Sbjct: 155 ILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLS 196
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 319 VGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVV--ARALE 376
+GT Y+APE++ + + D W+ G+ ++ L G PF G + + + V +
Sbjct: 209 LGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFD 267
Query: 377 FPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVN 422
F ++ AK+LI +L D +R ++ + ++ N +N
Sbjct: 268 FNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNIN 313
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 320 GTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPK 379
GT E++APEI++ E G D W++G+ + L G +PF G + TLAN+ A + +F +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 380 E--PSVPGPAKDLIAQLLVKDPTRRM 403
E AKD I +LLVK+ +R+
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRL 265
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 15/154 (9%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRE-LVSRNKESRARIERE--ILEMLDHP 146
LGSG V K + + G +AAK + KR+ SR R IERE IL + HP
Sbjct: 20 LGSGQFAIVK----KCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHP 75
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLH-VLRQRQPDKRFHESAVRFYASEVVVALEFLH 205
+ TL+ + L+ E GG+L L Q++ E + +++ + +LH
Sbjct: 76 NIITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLH 132
Query: 206 MMGIIYRDLKPENVLVRSDG----HIMLTDFDLS 235
I + DLKPEN+++ HI L DF L+
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTT 356
K+ + G + ++R + +GT EYLAPEI++ + A D W +GI + L T+
Sbjct: 174 KIVDFGMSRKIGHACELREI--MGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTS 231
Query: 357 PFKGIDHELTLANVVARALEFPKE--PSVPGPAKDLIAQLLVKDPTRR 402
PF G D++ T N+ +++ +E SV A D I LLVK+P +R
Sbjct: 232 PFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKR 279
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 89 RLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI--LEMLDH- 145
LG G V Q SKS+ G +AAK + KR R ++ RA I EI LE+
Sbjct: 36 ELGRGKFAVVR--QCISKST--GQEYAAKFLKKRR---RGQDCRAEILHEIAVLELAKSC 88
Query: 146 PFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLH 205
P + L+ + L+ E+ GG++ L + + E+ V +++ + +LH
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH 148
Query: 206 MMGIIYRDLKPENVLVRSD---GHIMLTDFDLSLK 237
I++ DLKP+N+L+ S G I + DF +S K
Sbjct: 149 QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRK 183
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 74/149 (49%), Gaps = 5/149 (3%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ ++G G G LV KS+ +G + K ++ + S+ +E +R E +L + HP
Sbjct: 29 LQKIGEGSFGKAILV----KSTEDGRQYVIKEINISRMSSKEREE-SRREVAVLANMKHP 83
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ + + ++ ++C GGDL Q F E + + ++ +AL+ +H
Sbjct: 84 NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD 143
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
I++RD+K +N+ + DG + L DF ++
Sbjct: 144 RKILHRDIKSQNIFLTKDGTVQLGDFGIA 172
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTT 356
+LG+ G ++ +++ + + +GT YL+PEI + + N D W LG ++EL
Sbjct: 165 QLGDFGIARVLNSTVEL-ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKH 223
Query: 357 PFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRR 402
F+ + + +++ + P + L++QL ++P R
Sbjct: 224 AFEAGSMKNLVLKIISGSFP-PVSLHYSYDLRSLVSQLFKRNPRDR 268
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 134/342 (39%), Gaps = 85/342 (24%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
SD + LG G G V +K++++ + ++A K + E K S E +L
Sbjct: 6 SDFEEIAVLGQGAFGQV----VKARNALDSRYYAIKKIRHTE----EKLSTILSEVMLLA 57
Query: 142 MLDHPFLPTLYAT-----------LDCPRWSCLLT--EFCPGGDLHVLRQRQPDKRFHES 188
L+H ++ YA + S L E+C G L+ L + + +
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE 117
Query: 189 AVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLV 248
R + +++ AL ++H GII+RDLKP N+ + ++ + DF L+ S +L
Sbjct: 118 YWRLF-RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 249 SDQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVA 308
S P + D +S I GT VA
Sbjct: 177 SQNLPGSSDNL-------------TSAI-------------------------GTAMYVA 198
Query: 309 EPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFK-GIDHELT 366
E++ G GH N +D ++LGI FE+ Y PF G++
Sbjct: 199 ------------------TEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNI 237
Query: 367 LANVVARALEFP--KEPSVPGPAKDLIAQLLVKDPTRRMGSK 406
L + + ++EFP + + K +I L+ DP +R G++
Sbjct: 238 LKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGAR 279
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 121/320 (37%), Gaps = 85/320 (26%)
Query: 110 NGCFFAAKVMD---KRELVSRNKESRARIERE---ILEMLDHPFLPTLYATLDCPRWSCL 163
G FA K+M+ +R + +E R RE + ++ HP + TL + + + L
Sbjct: 118 TGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFL 177
Query: 164 LTEFCPGGDLH-VLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVR 222
+ + G+L L ++ E R ++ A+ FLH I++RDLKPEN+L+
Sbjct: 178 VFDLMRKGELFDYLTEKVA---LSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD 234
Query: 223 SDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIV 282
+ I L+DF S
Sbjct: 235 DNMQIRLSDFGFSCH--------------------------------------------- 249
Query: 283 PAVSCLHPKRRRKKKLGNPG--TPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVD 340
L P + ++ G PG PEI+ +D TH G+G VD
Sbjct: 250 -----LEPGEKLRELCGTPGYLAPEILKCSMD-------ETH----------PGYGKEVD 287
Query: 341 WWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF--PKEPSVPGPAKDLIAQLLVKD 398
W G+ +F L G+ PF L L ++ +F P+ KDLI++LL D
Sbjct: 288 LWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVD 347
Query: 399 PTRRMGSKMGATAIKRHQFF 418
P R+ ++ +H FF
Sbjct: 348 PEARLTAEQAL----QHPFF 363
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 77/154 (50%), Gaps = 14/154 (9%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
V +LGSG G V L + K A K++ K VS + S+ E +L++LDHP
Sbjct: 42 VKKLGSGAYGEVLLCRDKVTHVER----AIKIIRKTS-VSTSSNSKLLEEVAVLKLLDHP 96
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
+ LY + R L+ E GG+L ++ + +F+E +V+ + +L
Sbjct: 97 NIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRM----KFNEVDAAVIIKQVLSGVTYL 152
Query: 205 HMMGIIYRDLKPENVLVRS---DGHIMLTDFDLS 235
H I++RDLKPEN+L+ S D I + DF LS
Sbjct: 153 HKHNIVHRDLKPENLLLESKEKDALIKIVDFGLS 186
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 319 VGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF- 377
+GT Y+APE++ + + D W++G+ +F L G PF G + L V F
Sbjct: 199 LGTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFD 257
Query: 378 -PKEPSVPGPAKDLIAQLLVKDPTRRMGSK 406
P+ +V AKDLI Q+L D RR+ ++
Sbjct: 258 SPEWKNVSEGAKDLIKQMLQFDSQRRISAQ 287
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 320 GTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPK 379
GT E++APEI++ E G D W++G+ + L G +PF G + TLAN+ A + +F +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 380 E--PSVPGPAKDLIAQLLVKDPTRRM 403
E AKD I +LLVK+ +R+
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRL 265
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 15/154 (9%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRE-LVSRNKESRARIERE--ILEMLDHP 146
LGSG V K + + G +AAK + KR+ SR SR IERE IL + H
Sbjct: 20 LGSGQFAIVK----KCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLH-VLRQRQPDKRFHESAVRFYASEVVVALEFLH 205
+ TL+ + L+ E GG+L L Q++ E + +++ + +LH
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLH 132
Query: 206 MMGIIYRDLKPENVLVRSDG----HIMLTDFDLS 235
I + DLKPEN+++ HI L DF L+
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 313 VRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVA 372
V + GT E++APEI++ E G D W++G+ + L G +PF G + TLAN+ A
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITA 232
Query: 373 RALEFPKE--PSVPGPAKDLIAQLLVKDPTRRM 403
+ +F +E AKD I +LLVK+ +R+
Sbjct: 233 VSYDFDEEFFSQTSELAKDFIRKLLVKETRKRL 265
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 15/154 (9%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRE-LVSRNKESRARIERE--ILEMLDHP 146
LGSG V K + + G +AAK + KR+ SR SR IERE IL + H
Sbjct: 20 LGSGQFAIVK----KCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLH-VLRQRQPDKRFHESAVRFYASEVVVALEFLH 205
+ TL+ + L+ E GG+L L Q++ E + +++ + +LH
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLH 132
Query: 206 MMGIIYRDLKPENVLVRSDG----HIMLTDFDLS 235
I + DLKPEN+++ HI L DF L+
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 6/154 (3%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
L+++ +LG G+ GSV L + N G A K + +++ + E +IL+ L
Sbjct: 13 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKAL 69
Query: 144 DHPFLPTLYATLDCP-RWSC-LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
F+ P R S L+ E+ P G L QR R S + Y+S++ +
Sbjct: 70 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGM 128
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+L ++RDL N+LV S+ H+ + DF L+
Sbjct: 129 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 162
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 116/298 (38%), Gaps = 78/298 (26%)
Query: 111 GCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPG 170
G +AA +++ ++L +R+ + R E I +L HP + L+ ++ L+ + G
Sbjct: 36 GQEYAAMIINTKKLSARDHQKLER-EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTG 94
Query: 171 GDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD---GHI 227
G+L + + E+ +++ A+ H MG+++R+LKPEN+L+ S +
Sbjct: 95 GEL--FEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAV 152
Query: 228 MLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIVPAVSC 287
L DF L+++ + G+QQ P +
Sbjct: 153 KLADFGLAIEVE----------------GEQQAWFGFAGTPGY----------------- 179
Query: 288 LHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIF 347
L P+ RK G P VD W G+
Sbjct: 180 LSPEVLRKDPYGKP-------------------------------------VDLWACGVI 202
Query: 348 IFELFYGTTPFKGIDHELTLANVVARALEF--PKEPSVPGPAKDLIAQLLVKDPTRRM 403
++ L G PF D + A A +F P+ +V AKDLI ++L +P++R+
Sbjct: 203 LYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRI 260
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 6/154 (3%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
L+++ +LG G+ GSV L + N G A K + +++ + E +IL+ L
Sbjct: 12 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKAL 68
Query: 144 DHPFLPTLYATLDCP-RWSC-LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
F+ P R S L+ E+ P G L QR R S + Y+S++ +
Sbjct: 69 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGM 127
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+L ++RDL N+LV S+ H+ + DF L+
Sbjct: 128 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 161
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 6/154 (3%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
L+++ +LG G+ GSV L + N G A K + +++ + E +IL+ L
Sbjct: 25 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKAL 81
Query: 144 DHPFLPTLYATLDCP-RWSC-LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
F+ P R S L+ E+ P G L QR R S + Y+S++ +
Sbjct: 82 HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGM 140
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+L ++RDL N+LV S+ H+ + DF L+
Sbjct: 141 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 174
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 110/302 (36%), Gaps = 101/302 (33%)
Query: 163 LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVR 222
L+ E GG +L + F+E +V AL+FLH GI +RDLKPEN+L
Sbjct: 88 LVFEKMRGGS--ILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCE 145
Query: 223 SDGHI---MLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQPPFGNSSCIIPN 279
+ + DFDL S +L D SP +
Sbjct: 146 HPNQVSPVKICDFDLG-------SGIKLNGDCSPIS------------------------ 174
Query: 280 CIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAV 339
TPE+ ++ G+ EY+APE++ ++
Sbjct: 175 -----------------------TPEL---------LTPCGSAEYMAPEVVEAFSEEASI 202
Query: 340 -----DWWTLGIFIFELFYGTTPFKG---------------IDHELTLANVVARALEFPK 379
D W+LG+ ++ L G PF G + ++ EFP
Sbjct: 203 YDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPD 262
Query: 380 E--PSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVNWALLRCAKPPFIPRP 437
+ + AKDLI++LLV+D +R + A + +H + G CA +P P
Sbjct: 263 KDWAHISCAAKDLISKLLVRDAKQR----LSAAQVLQHPWVQG-------CAPENTLPTP 311
Query: 438 VT 439
+
Sbjct: 312 MV 313
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 18/176 (10%)
Query: 80 TLSDLR-FVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
T+ DL F +LGSG G V+LV+ +S +G K ++K R++ +IE E
Sbjct: 19 TIDDLFIFKRKLGSGAFGDVHLVEERS----SGLERVIKTINK----DRSQVPMEQIEAE 70
Query: 139 I--LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYA 194
I L+ LDHP + ++ + ++ E C GG+L ++ + K E V
Sbjct: 71 IEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELM 130
Query: 195 SEVVVALEFLHMMGIIYRDLKPENVLVRSDG-H--IMLTDFDLS--LKGDNSTSTA 245
+++ AL + H ++++DLKPEN+L + H I + DF L+ K D ++ A
Sbjct: 131 KQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA 186
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 8/110 (7%)
Query: 312 DVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVV 371
D S + GT Y+APE+ + D W+ G+ ++ L G PF G E
Sbjct: 180 DEHSTNAAGTALYMAPEVFKRDVTFKC-DIWSAGVVMYFLLTGCLPFTGTSLEEVQQKAT 238
Query: 372 ARALEFPKE--PSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFN 419
+ + E P P A DL+ Q+L KDP RR A + H++F
Sbjct: 239 YKEPNYAVECRPLTP-QAVDLLKQMLTKDPERR----PSAAQVLHHEWFK 283
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 126/340 (37%), Gaps = 92/340 (27%)
Query: 86 FVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM--L 143
V +GSG+ G L ++ K SN A K +++ E + N ++REI+ L
Sbjct: 23 LVKDIGSGNFGVARL--MRDKQSNE--LVAVKYIERGEKIDEN------VKREIINHRSL 72
Query: 144 DHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEF 203
HP + + P ++ E+ GG+L + RF E RF+ +++ + +
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARFFFQQLISGVSY 130
Query: 204 LHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDC 263
H M + +RDLK EN L+ D SP + C
Sbjct: 131 CHAMQVCHRDLKLENTLL----------------------------DGSPAP---RLKIC 159
Query: 264 AVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHE 323
A FG S S LH + + GTP +A
Sbjct: 160 A-----FGYSKS----------SVLHSQPK-----STVGTPAYIA--------------- 184
Query: 324 YLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALE----FP 378
PE+ + E G D W+ G+ ++ + G PF+ + + R L P
Sbjct: 185 ---PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP 241
Query: 379 KEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFF 418
+ + LI+++ V DP +R + I+ H++F
Sbjct: 242 DYVHISPECRHLISRIFVADPAKR----ISIPEIRNHEWF 277
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 111/313 (35%), Gaps = 78/313 (24%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
LG G + + ++ FA K++ K L+ ++ + +E I L H +
Sbjct: 49 LGKGGFAKCFEIS----DADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVV 104
Query: 150 TLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGI 209
+ + + ++ E C L L +R+ K E R+Y ++V+ ++LH +
Sbjct: 105 GFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRV 162
Query: 210 IYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQPP 269
I+RDLK N+ + D + + DF L+ K + +++
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL--------------------- 201
Query: 270 FGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEI 329
C PN I P V
Sbjct: 202 -----CGTPNYIAPEV-------------------------------------------- 212
Query: 330 ISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKD 389
+S +GH VD W++G ++ L G PF+ + T + PK + A
Sbjct: 213 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH--INPVAAS 270
Query: 390 LIAQLLVKDPTRR 402
LI ++L DPT R
Sbjct: 271 LIQKMLQTDPTAR 283
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 320 GTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPK 379
GT E++APEI++ E G D W++G+ + L G +PF G + TLAN+ + + +F +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 380 E--PSVPGPAKDLIAQLLVKDPTRRM 403
E AKD I +LLVK+ +R+
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRL 265
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 15/154 (9%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRE-LVSRNKESRARIERE--ILEMLDHP 146
LGSG V K + + G +AAK + KR+ SR SR IERE IL + H
Sbjct: 20 LGSGQFAIVK----KCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLH-VLRQRQPDKRFHESAVRFYASEVVVALEFLH 205
+ TL+ + L+ E GG+L L Q++ E + +++ + +LH
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLH 132
Query: 206 MMGIIYRDLKPENVLVRSDG----HIMLTDFDLS 235
I + DLKPEN+++ HI L DF L+
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 19/168 (11%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
V +G+G G VY K + G A KVMD V+ ++E + E +L+
Sbjct: 26 FELVELVGNGTYGQVY----KGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINMLKKY 77
Query: 144 DHPF-LPTLYAT--------LDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYA 194
H + T Y +D W L+ EFC G + L + E + +
Sbjct: 78 SHHRNIATYYGAFIKKNPPGMDDQLW--LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYIC 135
Query: 195 SEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNST 242
E++ L LH +I+RD+K +NVL+ + + L DF +S + D +
Sbjct: 136 REILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV 183
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 314 RSMSFVGTHEYLAPEIISGEGHGNAV-----DWWTLGIFIFELFYGTTPF 358
R +F+GT ++APE+I+ + + +A D W+LGI E+ G P
Sbjct: 185 RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 111/313 (35%), Gaps = 78/313 (24%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
LG G + + ++ FA K++ K L+ ++ + +E I L H +
Sbjct: 47 LGKGGFAKCFEIS----DADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVV 102
Query: 150 TLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGI 209
+ + + ++ E C L L +R+ K E R+Y ++V+ ++LH +
Sbjct: 103 GFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRV 160
Query: 210 IYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQPP 269
I+RDLK N+ + D + + DF L+ K + +++
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL--------------------- 199
Query: 270 FGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEI 329
C PN I P V
Sbjct: 200 -----CGTPNYIAPEV-------------------------------------------- 210
Query: 330 ISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKD 389
+S +GH VD W++G ++ L G PF+ + T + PK + A
Sbjct: 211 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH--INPVAAS 268
Query: 390 LIAQLLVKDPTRR 402
LI ++L DPT R
Sbjct: 269 LIQKMLQTDPTAR 281
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 14/197 (7%)
Query: 86 FVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDH 145
F+ LGSG V+LV K G FA K + K ++S E +L+ + H
Sbjct: 13 FMEVLGSGAFSEVFLV----KQRLTGKLFALKCIKKSPAF---RDSSLENEIAVLKKIKH 65
Query: 146 PFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLH 205
+ TL + L+ + GG+L + + E +V+ A+++LH
Sbjct: 66 ENIVTLEDIYESTTHYYLVMQLVSGGEL--FDRILERGVYTEKDASLVIQQVLSAVKYLH 123
Query: 206 MMGIIYRDLKPENVLV---RSDGHIMLTDFDLSLKGDNSTSTAQLVS--DQSPPTGDQQP 260
GI++RDLKPEN+L + IM+TDF LS N + + +P Q+P
Sbjct: 124 ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKP 183
Query: 261 NDCAVDQPPFGNSSCII 277
AVD G + I+
Sbjct: 184 YSKAVDCWSIGVITYIL 200
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 320 GTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF-- 377
GT Y+APE+++ + + AVD W++G+ + L G PF + EF
Sbjct: 169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFES 228
Query: 378 PKEPSVPGPAKDLIAQLLVKDPTRR 402
P + AKD I LL KDP R
Sbjct: 229 PFWDDISESAKDFICHLLEKDPNER 253
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 313 VRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVA 372
V + GT E++APEI++ E G D W++G+ + L G +PF G + TLAN+ +
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITS 232
Query: 373 RALEFPKE--PSVPGPAKDLIAQLLVKDPTRRM 403
+ +F +E AKD I +LLVK+ +R+
Sbjct: 233 VSYDFDEEFFSHTSELAKDFIRKLLVKETRKRL 265
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 15/154 (9%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRE-LVSRNKESRARIERE--ILEMLDHP 146
LGSG V K + + G +AAK + KR+ SR SR IERE IL + H
Sbjct: 20 LGSGQFAIVK----KCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLH-VLRQRQPDKRFHESAVRFYASEVVVALEFLH 205
+ TL+ + L+ E GG+L L Q++ E + +++ + +LH
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLH 132
Query: 206 MMGIIYRDLKPENVLVRSDG----HIMLTDFDLS 235
I + DLKPEN+++ HI L DF L+
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 313 VRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVA 372
V + GT E++APEI++ E G D W++G+ + L G +PF G + TLAN+ +
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITS 232
Query: 373 RALEFPKE--PSVPGPAKDLIAQLLVKDPTRRM 403
+ +F +E AKD I +LLVK+ +R+
Sbjct: 233 VSYDFDEEFFSHTSELAKDFIRKLLVKETRKRL 265
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 15/154 (9%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRE-LVSRNKESRARIERE--ILEMLDHP 146
LGSG V K + + G +AAK + KR+ SR SR IERE IL + H
Sbjct: 20 LGSGQFAIVK----KCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHH 75
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLH-VLRQRQPDKRFHESAVRFYASEVVVALEFLH 205
+ TL+ + L+ E GG+L L Q++ E + +++ + +LH
Sbjct: 76 NVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNYLH 132
Query: 206 MMGIIYRDLKPENVLVRSDG----HIMLTDFDLS 235
I + DLKPEN+++ HI L DF L+
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 115/314 (36%), Gaps = 80/314 (25%)
Query: 90 LGSGDIGSVY-LVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFL 148
LG G Y + + +K FA KV+ K L+ +++ + E I + LD+P +
Sbjct: 50 LGKGGFAKCYEITDMDTKE-----VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHV 104
Query: 149 PTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMG 208
+ + + ++ E C L L +R+ K E R++ + + +++LH
Sbjct: 105 VGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 209 IIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQP 268
+I+RDLK N+ + D + + DF L+ K + G+++ + C
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD--------------GERKKDLCGT--- 205
Query: 269 PFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPE 328
PN I P V C
Sbjct: 206 ---------PNYIAPEVLC----------------------------------------- 215
Query: 329 IISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKEPSVPGPAK 388
+GH VD W+LG ++ L G PF+ + T + P+ + A
Sbjct: 216 ---KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH--INPVAS 270
Query: 389 DLIAQLLVKDPTRR 402
LI ++L DPT R
Sbjct: 271 ALIRRMLHADPTLR 284
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 133/342 (38%), Gaps = 85/342 (24%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
SD + LG G G V +K++++ + ++A K + E K S E +L
Sbjct: 6 SDFEEIAVLGQGAFGQV----VKARNALDSRYYAIKKIRHTE----EKLSTILSEVMLLA 57
Query: 142 MLDHPFLPTLYAT-----------LDCPRWSCLLT--EFCPGGDLHVLRQRQPDKRFHES 188
L+H ++ YA + S L E+C L+ L + + +
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE 117
Query: 189 AVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLV 248
R + +++ AL ++H GII+RDLKP N+ + ++ + DF L+ S +L
Sbjct: 118 YWRLF-RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 249 SDQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVA 308
S P + D +S I GT VA
Sbjct: 177 SQNLPGSSDNL-------------TSAI-------------------------GTAMYVA 198
Query: 309 EPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFK-GIDHELT 366
E++ G GH N +D ++LGI FE+ Y PF G++
Sbjct: 199 ------------------TEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNI 237
Query: 367 LANVVARALEFP--KEPSVPGPAKDLIAQLLVKDPTRRMGSK 406
L + + ++EFP + + K +I L+ DP +R G++
Sbjct: 238 LKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGAR 279
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
L+++ +LG G+ GSV L + N G A K + +++ + E +IL+ L
Sbjct: 9 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKAL 65
Query: 144 DHPFLPTLYATLDCPRWS--CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
F+ P L+ E+ P G L QR R S + Y+S++ +
Sbjct: 66 HSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGM 124
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+L ++RDL N+LV S+ H+ + DF L+
Sbjct: 125 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 158
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 115/314 (36%), Gaps = 80/314 (25%)
Query: 90 LGSGDIGSVY-LVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFL 148
LG G Y + + +K FA KV+ K L+ +++ + E I + LD+P +
Sbjct: 34 LGKGGFAKCYEITDMDTKE-----VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHV 88
Query: 149 PTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMG 208
+ + + ++ E C L L +R+ K E R++ + + +++LH
Sbjct: 89 VGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNR 146
Query: 209 IIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQP 268
+I+RDLK N+ + D + + DF L+ K + G+++ + C
Sbjct: 147 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD--------------GERKKDLCGT--- 189
Query: 269 PFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPE 328
PN I P V C
Sbjct: 190 ---------PNYIAPEVLC----------------------------------------- 199
Query: 329 IISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKEPSVPGPAK 388
+GH VD W+LG ++ L G PF+ + T + P+ + A
Sbjct: 200 ---KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH--INPVAS 254
Query: 389 DLIAQLLVKDPTRR 402
LI ++L DPT R
Sbjct: 255 ALIRRMLHADPTLR 268
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 114/314 (36%), Gaps = 80/314 (25%)
Query: 90 LGSGDIGSVY-LVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFL 148
LG G Y + + +K FA KV+ K L+ +++ + E I + LD+P +
Sbjct: 50 LGKGGFAKCYEITDMDTKE-----VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHV 104
Query: 149 PTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMG 208
+ + + ++ E C L L +R+ K E R++ + + +++LH
Sbjct: 105 VGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 209 IIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQP 268
+I+RDLK N+ + D + + DF L+ K + G+++ C
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD--------------GERKKTLCGT--- 205
Query: 269 PFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPE 328
PN I P V C
Sbjct: 206 ---------PNYIAPEVLC----------------------------------------- 215
Query: 329 IISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKEPSVPGPAK 388
+GH VD W+LG ++ L G PF+ + T + P+ + A
Sbjct: 216 ---KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH--INPVAS 270
Query: 389 DLIAQLLVKDPTRR 402
LI ++L DPT R
Sbjct: 271 ALIRRMLHADPTLR 284
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 110/272 (40%), Gaps = 68/272 (25%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
SDL LG G G V + +VM +EL+ ++E++ +E+
Sbjct: 10 SDLIHGEVLGKGCFGQAIKVTHRE---------TGEVMVMKELIRFDEETQRTFLKEVKV 60
Query: 142 M--LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
M L+HP + L + +TE+ GG L + + D ++ S +A ++
Sbjct: 61 MRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGI-IKSMDSQYPWSQRVSFAKDIAS 119
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQ 259
+ +LH M II+RDL N LVR + ++++ DF L A+L+ D+
Sbjct: 120 GMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGL----------ARLMVDEK------- 162
Query: 260 PNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFV 319
P G S P+ +++R +GNP
Sbjct: 163 -------TQPEGLRSLKKPD-----------RKKRYTVVGNP------------------ 186
Query: 320 GTHEYLAPEIISGEGHGNAVDWWTLGIFIFEL 351
++APE+I+G + VD ++ GI + E+
Sbjct: 187 ---YWMAPEMINGRSYDEKVDVFSFGIVLCEI 215
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 126/340 (37%), Gaps = 92/340 (27%)
Query: 86 FVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM--L 143
V +G+G+ G L ++ K +N A K +++ E + N ++REI+ L
Sbjct: 23 LVKDIGAGNFGVARL--MRDKQANE--LVAVKYIERGEKIDEN------VKREIINHRSL 72
Query: 144 DHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEF 203
HP + + P ++ E+ GG+L + RF E RF+ +++ + +
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARFFFQQLISGVSY 130
Query: 204 LHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDC 263
H M + +RDLK EN L+ D S + ++D
Sbjct: 131 AHAMQVAHRDLKLENTLL-----------------DGSPAPRLKIAD------------- 160
Query: 264 AVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHE 323
FG S S LH + + GTP +A
Sbjct: 161 ------FGYSKA----------SVLHSQPK-----SAVGTPAYIA--------------- 184
Query: 324 YLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALE----FP 378
PE+ + E G D W+ G+ ++ + G PF+ + + R L P
Sbjct: 185 ---PEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP 241
Query: 379 KEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFF 418
+ + LI+++ V DP +R + I+ H++F
Sbjct: 242 DYVHISPECRHLISRIFVADPAKR----ISIPEIRNHEWF 277
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 114/314 (36%), Gaps = 80/314 (25%)
Query: 90 LGSGDIGSVY-LVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFL 148
LG G Y + + +K FA KV+ K L+ +++ + E I + LD+P +
Sbjct: 50 LGKGGFAKCYEITDMDTKE-----VFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHV 104
Query: 149 PTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMG 208
+ + + ++ E C L L +R+ K E R++ + + +++LH
Sbjct: 105 VGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNR 162
Query: 209 IIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQP 268
+I+RDLK N+ + D + + DF L+ K + G+++ C
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD--------------GERKKXLCGT--- 205
Query: 269 PFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPE 328
PN I P V C
Sbjct: 206 ---------PNYIAPEVLC----------------------------------------- 215
Query: 329 IISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKEPSVPGPAK 388
+GH VD W+LG ++ L G PF+ + T + P+ + A
Sbjct: 216 ---KKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRH--INPVAS 270
Query: 389 DLIAQLLVKDPTRR 402
LI ++L DPT R
Sbjct: 271 ALIRRMLHADPTLR 284
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 109/302 (36%), Gaps = 101/302 (33%)
Query: 163 LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVR 222
L+ E GG +L + F+E +V AL+FLH GI +RDLKPEN+L
Sbjct: 88 LVFEKMRGGS--ILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCE 145
Query: 223 SDGHI---MLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQPPFGNSSCIIPN 279
+ + DF L S +L D SP +
Sbjct: 146 HPNQVSPVKICDFGLG-------SGIKLNGDCSPIS------------------------ 174
Query: 280 CIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAV 339
TPE+ ++ G+ EY+APE++ ++
Sbjct: 175 -----------------------TPEL---------LTPCGSAEYMAPEVVEAFSEEASI 202
Query: 340 -----DWWTLGIFIFELFYGTTPFKG---------------IDHELTLANVVARALEFPK 379
D W+LG+ ++ L G PF G + ++ EFP
Sbjct: 203 YDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPD 262
Query: 380 E--PSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVNWALLRCAKPPFIPRP 437
+ + AKDLI++LLV+D +R + A + +H + G CA +P P
Sbjct: 263 KDWAHISCAAKDLISKLLVRDAKQR----LSAAQVLQHPWVQG-------CAPENTLPTP 311
Query: 438 VT 439
+
Sbjct: 312 MV 313
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 131/338 (38%), Gaps = 73/338 (21%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAK-VMDKRELVSRNKESRARIERE 138
L V +LG G G V+ KS G A K + D +N R RE
Sbjct: 7 VLRKYELVKKLGKGAYGIVW----KSIDRRTGEVVAVKKIFD----AFQNSTDAQRTFRE 58
Query: 139 IL---EMLDHPFLPTLYATL--DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFY 193
I+ E+ H + L L D R L+ ++ DLH + + + H+ V +
Sbjct: 59 IMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRANILEPVHKQYVVY- 116
Query: 194 ASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSP 253
+++ +++LH G+++RD+KP N+L+ ++ H+ + DF LS S + V++ P
Sbjct: 117 --QLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLS----RSFVNIRRVTNNIP 170
Query: 254 PTGDQQPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDV 313
+ ++ + DQP +
Sbjct: 171 LSINENTENFDDDQPILTD----------------------------------------- 189
Query: 314 RSMSFVGTHEYLAPEIISGE-GHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVA 372
+V T Y APEI+ G + +D W+LG + E+ G F G L ++
Sbjct: 190 ----YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG 245
Query: 373 RALEFPKE---PSVPGP-AKDLIAQLLVKDPTRRMGSK 406
++FP S+ P AK +I L K R+ +
Sbjct: 246 -VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKR 282
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 128/340 (37%), Gaps = 92/340 (27%)
Query: 86 FVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL--EML 143
FV +GSG+ G L++ K A K +++ + N ++REI+ L
Sbjct: 24 FVKDIGSGNFGVARLMRDKLTKE----LVAVKYIERGAAIDEN------VQREIINHRSL 73
Query: 144 DHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDK-RFHESAVRFYASEVVVALE 202
HP + + P ++ E+ GG+L+ +R + RF E RF+ +++ +
Sbjct: 74 RHPNIVRFKEVILTPTHLAIIMEYASGGELY---ERICNAGRFSEDEARFFFQQLLSGVS 130
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPND 262
+ H M I +RDLK EN L+ D S + + D
Sbjct: 131 YCHSMQICHRDLKLENTLL-----------------DGSPAPRLKICD------------ 161
Query: 263 CAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTH 322
FG S S LH + + GTP +A + +R
Sbjct: 162 -------FGYSKS----------SVLHSQPK-----STVGTPAYIAPEVLLR-------Q 192
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKG----IDHELTLANVVARALEFP 378
EY G D W+ G+ ++ + G PF+ D+ T+ +++ P
Sbjct: 193 EY----------DGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIP 242
Query: 379 KEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFF 418
+ + LI+++ V DP +++ IK H +F
Sbjct: 243 DDIRISPECCHLISRIFVADP----ATRISIPEIKTHSWF 278
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ D V LG G G V L + A K++D + V + I++EI
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA----VAVKIVDMKRAV----DCPENIKKEIC 56
Query: 141 --EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
+ML+H + Y L E+C GG+L + +PD E + + +++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLM 114
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +LH +GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ D V LG G G V L + A K++D + V + I++EI
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA----VAVKIVDMKRAV----DCPENIKKEIC 57
Query: 141 --EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
+ML+H + Y L E+C GG+L + +PD E + + +++
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLM 115
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +LH +GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 7/144 (4%)
Query: 109 NNGCFFAAKVMDKRELVSRNKESRARIERE--ILEMLDHPFLPTLYATLDCPRWSCLLTE 166
G FA K++D + S S ++RE I ML HP + L T ++ E
Sbjct: 47 ETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFE 106
Query: 167 FCPGGDL--HVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD 224
F G DL ++++ + E+ Y +++ AL + H II+RD+KPENVL+ S
Sbjct: 107 FMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASK 166
Query: 225 GH---IMLTDFDLSLKGDNSTSTA 245
+ + L DF ++++ S A
Sbjct: 167 ENSAPVKLGDFGVAIQLGESGLVA 190
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTT 356
KLG+ G + E + + VGT ++APE++ E +G VD W G+ +F L G
Sbjct: 173 KLGDFGVAIQLGES-GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCL 231
Query: 357 PFKGIDHELTLANVVARALEFPKEPS-VPGPAKDLIAQLLVKDPTRRM 403
PF G L + + P++ S + AKDL+ ++L+ DP R+
Sbjct: 232 PFYGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERI 279
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ D V LG G G V L + A K++D + V + + I I
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA----VAVKIVDMKRAVDCPENIKKEIX--IN 58
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ML+H + Y L E+C GG+L + +PD E + + +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +LH +GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ D V LG G G V L + A K++D + V + + I I
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA----VAVKIVDMKRAVDCPENIKKEIX--IN 59
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ML+H + Y L E+C GG+L + +PD E + + +++
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +LH +GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ D V LG G G V L + A K++D + V + I++EI
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA----VAVKIVDMKRAV----DCPENIKKEIC 57
Query: 141 --EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
+ML+H + Y L E+C GG+L + +PD E + + +++
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLM 115
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +LH +GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ D V LG G G V L + A K++D + V + I++EI
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA----VAVKIVDMKRAV----DCPENIKKEIC 57
Query: 141 --EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
+ML+H + Y L E+C GG+L + +PD E + + +++
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLM 115
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +LH +GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ D V LG G G V L + A K++D + V + I++EI
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA----VAVKIVDMKRAV----DCPENIKKEIC 57
Query: 141 --EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
+ML+H + Y L E+C GG+L + +PD E + + +++
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLM 115
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +LH +GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ D V LG G G V L + A K++D + V + + I I
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA----VAVKIVDMKRAVDCPENIKKEIX--IN 58
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ML+H + Y L E+C GG+L + +PD E + + +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +LH +GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ D V LG G G V L + A K++D + V + I++EI
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA----VAVKIVDMKRAV----DCPENIKKEIC 55
Query: 141 --EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
+ML+H + Y L E+C GG+L + +PD E + + +++
Sbjct: 56 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLM 113
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +LH +GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 114 AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 150
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 131/342 (38%), Gaps = 85/342 (24%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
SD + LG G G V +K++++ + ++A K + E K S E +L
Sbjct: 6 SDFEEIAVLGQGAFGQV----VKARNALDSRYYAIKKIRHTE----EKLSTILSEVXLLA 57
Query: 142 MLDHPFLPTLYAT-----------LDCPRWSCLLT--EFCPGGDLHVLRQRQPDKRFHES 188
L+H ++ YA + S L E+C L+ L + + +
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDE 117
Query: 189 AVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLV 248
R + +++ AL ++H GII+R+LKP N+ + ++ + DF L+ S +L
Sbjct: 118 YWRLF-RQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 249 SDQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVA 308
S P + D + A+ GT VA
Sbjct: 177 SQNLPGSSDN----------------------LTSAI----------------GTAXYVA 198
Query: 309 EPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFK-GIDHELT 366
E++ G GH N +D ++LGI FE Y PF G +
Sbjct: 199 ------------------TEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNI 237
Query: 367 LANVVARALEFP--KEPSVPGPAKDLIAQLLVKDPTRRMGSK 406
L + + ++EFP + + K +I L+ DP +R G++
Sbjct: 238 LKKLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGAR 279
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ D V LG G G V L + A K++D + V + I++EI
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA----VAVKIVDMKRAV----DCPENIKKEIC 56
Query: 141 --EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
+ML+H + Y L E+C GG+L + +PD E + + +++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLM 114
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +LH +GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ D V LG G G V L + A K++D + V + I++EI
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA----VAVKIVDMKRAV----DCPENIKKEIC 56
Query: 141 --EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
+ML+H + Y L E+C GG+L + +PD E + + +++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLM 114
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +LH +GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ D V LG G G V L + A K++D + V + I++EI
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA----VAVKIVDMKRAV----DCPENIKKEIC 57
Query: 141 --EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
+ML+H + Y L E+C GG+L + +PD E + + +++
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLM 115
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +LH +GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ D V LG G G V L + A K++D + V + I++EI
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA----VAVKIVDMKRAV----DCPENIKKEIC 56
Query: 141 --EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
+ML+H + Y L E+C GG+L + +PD E + + +++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLM 114
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +LH +GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Query: 132 RARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKR-FHESAV 190
R + E EI++ LDHP + LY T + L+ E C GG+L +R KR F ES
Sbjct: 69 RFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELF---ERVVHKRVFRESDA 125
Query: 191 RFYASEVVVALEFLHMMGIIYRDLKPENVLVRS---DGHIMLTDFDLSLK 237
+V+ A+ + H + + +RDLKPEN L + D + L DF L+ +
Sbjct: 126 ARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 175
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 319 VGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFP 378
VGT Y++P+++ G +G D W+ G+ ++ L G PF + + FP
Sbjct: 186 VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 244
Query: 379 KEP--SVPGPAKDLIAQLLVKDPTRRMGS 405
++ +V A+ LI +LL K P +R+ S
Sbjct: 245 EKDWLNVSPQAESLIRRLLTKSPKQRITS 273
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Query: 132 RARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKR-FHESAV 190
R + E EI++ LDHP + LY T + L+ E C GG+L +R KR F ES
Sbjct: 52 RFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELF---ERVVHKRVFRESDA 108
Query: 191 RFYASEVVVALEFLHMMGIIYRDLKPENVLVRS---DGHIMLTDFDLSLK 237
+V+ A+ + H + + +RDLKPEN L + D + L DF L+ +
Sbjct: 109 ARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 158
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 319 VGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFP 378
VGT Y++P+++ G +G D W+ G+ ++ L G PF + + FP
Sbjct: 169 VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 227
Query: 379 KEP--SVPGPAKDLIAQLLVKDPTRRMGS 405
++ +V A+ LI +LL K P +R+ S
Sbjct: 228 EKDWLNVSPQAESLIRRLLTKSPKQRITS 256
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ D V LG G G V L + A K++D + V + I++EI
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA----VAVKIVDMKRAV----DCPENIKKEIC 56
Query: 141 --EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
+ML+H + Y L E+C GG+L + +PD E + + +++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLM 114
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +LH +GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ D V LG G G V L + A K++D + V + I++EI
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEA----VAVKIVDMKRAV----DCPENIKKEIC 56
Query: 141 --EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
+ML+H + Y L E+C GG+L + +PD E + + +++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLM 114
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +LH +GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ D V LG G G V L + A K++D + V + I++EI
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA----VAVKIVDMKRAV----DCPENIKKEIC 56
Query: 141 --EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
+ML+H + Y L E+C GG+L + +PD E + + +++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLM 114
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +LH +GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ D V LG G G V L + A K++D + V + I++EI
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA----VAVKIVDMKRAV----DCPENIKKEIC 56
Query: 141 --EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
+ML+H + Y L E+C GG+L + +PD E + + +++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLM 114
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +LH +GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ D V LG G G V L + A K++D + V + I++EI
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA----VAVKIVDMKRAV----DCPENIKKEIC 56
Query: 141 --EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
+ML+H + Y L E+C GG+L + +PD E + + +++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLM 114
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +LH +GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ D V LG G G V L + A K++D + V + I++EI
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA----VAVKIVDMKRAV----DCPENIKKEIC 57
Query: 141 --EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
+ML+H + Y L E+C GG+L + +PD E + + +++
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLM 115
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +LH +GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ D V LG G G V L + A K++D + V + I++EI
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA----VAVKIVDMKRAV----DCPENIKKEIC 56
Query: 141 --EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
+ML+H + Y L E+C GG+L + +PD E + + +++
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLM 114
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +LH +GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 115 AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 90/204 (44%), Gaps = 18/204 (8%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ D R V LG+G V L + K A K + K+ L KE E +L
Sbjct: 19 IYDFRDV--LGTGAFSEVILAEDKRTQK----LVAIKCIAKKAL--EGKEGSMENEIAVL 70
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFH-ESAVRFYASEVVV 199
+ HP + L + L+ + GG+L R +K F+ E +V+
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF---DRIVEKGFYTERDASRLIFQVLD 127
Query: 200 ALEFLHMMGIIYRDLKPENVLVRS---DGHIMLTDFDLSLKGDNSTSTAQLVSD---QSP 253
A+++LH +GI++RDLKPEN+L S D IM++DF LS D + + +P
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 254 PTGDQQPNDCAVDQPPFGNSSCII 277
Q+P AVD G + I+
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYIL 211
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 320 GTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF-- 377
GT Y+APE+++ + + AVD W++G+ + L G PF + ++ EF
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS 239
Query: 378 PKEPSVPGPAKDLIAQLLVKDPTRRM 403
P + AKD I L+ KDP +R
Sbjct: 240 PYWDDISDSAKDFIRHLMEKDPEKRF 265
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
TL++ R ++G G VY ++ +G A K + +L+ + E ++
Sbjct: 30 TLANFRIEKKIGRGQFSEVY----RAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDL 85
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL-HVLRQRQPDKRFH-ESAVRFYASEV 197
L+ L+HP + YA+ ++ E GDL +++ + KR E V Y ++
Sbjct: 86 LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL 145
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
ALE +H +++RD+KP NV + + G + L D L + T+ A
Sbjct: 146 CSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAH 194
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTT 356
KLG+ G + + S VGT Y++PE I G+ D W+LG ++E+ +
Sbjct: 176 KLGDLGLGRFFSSKTTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS 234
Query: 357 PFKGIDHELTLANVVARALEFPKEPS--VPGPAKDLIAQLLVKDPTRR 402
PF G L ++P PS + L+ + DP +R
Sbjct: 235 PFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKR 282
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 26/171 (15%)
Query: 114 FAAKVMDKRELVSRNKESRARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL 173
FA K++DK + R+ I +L HP + TL D ++ ++TE GG+L
Sbjct: 50 FAVKIIDKSK---RDPTEEIEI---LLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGEL 103
Query: 174 --HVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVL-VRSDGH---I 227
+LRQ+ +R SAV F ++ V E+LH G+++RDLKP N+L V G+ I
Sbjct: 104 LDKILRQKFFSER-EASAVLFTITKTV---EYLHAQGVVHRDLKPSNILYVDESGNPESI 159
Query: 228 MLTDFDLS--LKGDNST-----STAQLVSDQSPPTGDQQPNDCAVDQPPFG 271
+ DF + L+ +N TA V +P ++Q D A D G
Sbjct: 160 RICDFGFAKQLRAENGLLXTPCYTANFV---APEVLERQGYDAACDIWSLG 207
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 15/113 (13%)
Query: 321 THEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPF-KGIDHELTLANVVAR------ 373
T ++APE++ +G+ A D W+LG+ ++ G TPF G D T ++AR
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDD--TPEEILARIGSGKF 240
Query: 374 ALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVNWALL 426
+L SV AKDL+++ L DP +R+ + + + RH + V+W L
Sbjct: 241 SLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAAL----VLRHPWI--VHWDQL 287
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 26/171 (15%)
Query: 114 FAAKVMDKRELVSRNKESRARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL 173
FA K++DK + R+ I +L HP + TL D ++ ++TE GG+L
Sbjct: 50 FAVKIIDKSK---RDPTEEIEI---LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGEL 103
Query: 174 --HVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVL-VRSDGH---I 227
+LRQ+ +R SAV F ++ V E+LH G+++RDLKP N+L V G+ I
Sbjct: 104 LDKILRQKFFSER-EASAVLFTITKTV---EYLHAQGVVHRDLKPSNILYVDESGNPESI 159
Query: 228 MLTDFDLS--LKGDNST-----STAQLVSDQSPPTGDQQPNDCAVDQPPFG 271
+ DF + L+ +N TA V +P ++Q D A D G
Sbjct: 160 RICDFGFAKQLRAENGLLMTPCYTANFV---APEVLERQGYDAACDIWSLG 207
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 15/110 (13%)
Query: 321 THEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPF-KGIDHELTLANVVAR------ 373
T ++APE++ +G+ A D W+LG+ ++ + G TPF G D T ++AR
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD--TPEEILARIGSGKF 240
Query: 374 ALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVNW 423
+L SV AKDL++++L DP +R + A + RH + V+W
Sbjct: 241 SLSGGYWNSVSDTAKDLVSKMLHVDPHQR----LTAALVLRHPWI--VHW 284
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 12/157 (7%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ D V LG G G V L + A K++D + V + I++EI
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA----VAVKIVDMKRAV----DCPENIKKEIC 57
Query: 141 --EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
ML+H + Y L E+C GG+L + +PD E + + +++
Sbjct: 58 INAMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLM 115
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +LH +GI +RD+KPEN+L+ ++ ++DF L+
Sbjct: 116 AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 24/156 (15%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVM----DKRELVSRNKESRARIEREILEM 142
+ +LG G GSVY K+ G A K + D +E++ E I++
Sbjct: 34 LEKLGEGSYGSVY----KAIHKETGQIVAIKQVPVESDLQEIIK---------EISIMQQ 80
Query: 143 LDHPFLPTLYATL--DCPRWSCLLTEFCPGGDLH-VLRQRQPDKRFHESAVRFYASEVVV 199
D P + Y + + W ++ E+C G + ++R R +K E + +
Sbjct: 81 CDSPHVVKYYGSYFKNTDLW--IVMEYCGAGSVSDIIRLR--NKTLTEDEIATILQSTLK 136
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
LE+LH M I+RD+K N+L+ ++GH L DF ++
Sbjct: 137 GLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVA 172
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 25/110 (22%)
Query: 319 VGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFP 378
+GT ++APE+I G+ D W+LGI E+ G P+ I H + ++
Sbjct: 186 IGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI-HPMRAIFMI------- 237
Query: 379 KEPSVPGPA-----------KDLIAQLLVKDPTRRMGSKMGATAIKRHQF 417
P+ P P D + Q LVK P +R AT + +H F
Sbjct: 238 --PTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQR----ATATQLLQHPF 281
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 320 GTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPK 379
T E+ APEI+ E G D W +G+ + L G +PF G D TL NV EF +
Sbjct: 212 ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDE 271
Query: 380 EP--SVPGPAKDLIAQLLVKDPTRRM 403
+ SV AKD I LL K+P +R+
Sbjct: 272 DAFSSVSPEAKDFIKNLLQKEPRKRL 297
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 19/205 (9%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ LGSG G V+ K+ G F AK ++ + + + E I+ L HP
Sbjct: 56 LEELGSGAFGVVHRCVEKA----TGRVFVAKFINTPYPLDK---YTVKNEISIMNQLHHP 108
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
L L+ + L+ EF GG+L R D + E+ V Y + L+ +H
Sbjct: 109 KLINLHDAFEDKYEMVLILEFLSGGEL-FDRIAAEDYKMSEAEVINYMRQACEGLKHMHE 167
Query: 207 MGIIYRDLKPENVL--VRSDGHIMLTDFDLSLKGD------NSTSTAQLVSDQSPPTGDQ 258
I++ D+KPEN++ + + + DF L+ K + +T+TA+ +P D+
Sbjct: 168 HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFA---APEIVDR 224
Query: 259 QPNDCAVDQPPFGNSSCIIPNCIVP 283
+P D G ++ + + P
Sbjct: 225 EPVGFYTDMWAIGVLGYVLLSGLSP 249
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 14/150 (9%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
LG G G V+ K + + G AAK++ R + ++KE + E ++ LDH L
Sbjct: 97 LGGGRFGQVH----KCEETATGLKLAAKIIKTRGM--KDKE-EVKNEISVMNQLDHANLI 149
Query: 150 TLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFH--ESAVRFYASEVVVALEFLHMM 207
LY + L+ E+ GG+L R D+ ++ E + ++ + +H M
Sbjct: 150 QLYDAFESKNDIVLVMEYVDGGELF---DRIIDESYNLTELDTILFMKQICEGIRHMHQM 206
Query: 208 GIIYRDLKPENVLV--RSDGHIMLTDFDLS 235
I++ DLKPEN+L R I + DF L+
Sbjct: 207 YILHLDLKPENILCVNRDAKQIKIIDFGLA 236
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 320 GTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPK 379
GT E+LAPE+++ + D W++G+ + L G +PF G + TL N++A +
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED 309
Query: 380 EP--SVPGPAKDLIAQLLVKDPTRRMGS 405
E + AK+ I++LL+K+ + R+ +
Sbjct: 310 EEFQDISEEAKEFISKLLIKEKSWRISA 337
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 86 FVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDH 145
F LG+G V L + K A K + K L KE E +L + H
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQK----LVAIKCIAKEAL--EGKEGSMENEIAVLHKIKH 75
Query: 146 PFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFH-ESAVRFYASEVVVALEFL 204
P + L + L+ + GG+L R +K F+ E +V+ A+++L
Sbjct: 76 PNIVALDDIYESGGHLYLIMQLVSGGELF---DRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 205 HMMGIIYRDLKPENVLVRS---DGHIMLTDFDLSLKGDNSTSTAQLVSD---QSPPTGDQ 258
H +GI++RDLKPEN+L S D IM++DF LS D + + +P Q
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 259 QPNDCAVDQPPFGNSSCII 277
+P AVD G + I+
Sbjct: 193 KPYSKAVDCWSIGVIAYIL 211
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 320 GTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF-- 377
GT Y+APE+++ + + AVD W++G+ + L G PF + ++ EF
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS 239
Query: 378 PKEPSVPGPAKDLIAQLLVKDPTRRM 403
P + AKD I L+ KDP +R
Sbjct: 240 PYWDDISDSAKDFIRHLMEKDPEKRF 265
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 86/199 (43%), Gaps = 16/199 (8%)
Query: 86 FVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDH 145
F LG+G V L + K A K + K L KE E +L + H
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQK----LVAIKCIAKEAL--EGKEGSMENEIAVLHKIKH 75
Query: 146 PFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFH-ESAVRFYASEVVVALEFL 204
P + L + L+ + GG+L R +K F+ E +V+ A+++L
Sbjct: 76 PNIVALDDIYESGGHLYLIMQLVSGGELF---DRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 205 HMMGIIYRDLKPENVLVRS---DGHIMLTDFDLSLKGDNSTSTAQLVSD---QSPPTGDQ 258
H +GI++RDLKPEN+L S D IM++DF LS D + + +P Q
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 259 QPNDCAVDQPPFGNSSCII 277
+P AVD G + I+
Sbjct: 193 KPYSKAVDCWSIGVIAYIL 211
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 320 GTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF-- 377
GT Y+APE+++ + + AVD W++G+ + L G PF + ++ EF
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS 239
Query: 378 PKEPSVPGPAKDLIAQLLVKDPTRRM 403
P + AKD I L+ KDP +R
Sbjct: 240 PYWDDISDSAKDFIRHLMEKDPEKRF 265
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ D R V LG+G V L + K A K + K L KE E +L
Sbjct: 19 IYDFRDV--LGTGAFSEVILAEDKRTQK----LVAIKCIAKEAL--EGKEGSMENEIAVL 70
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFH-ESAVRFYASEVVV 199
+ HP + L + L+ + GG+L R +K F+ E +V+
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF---DRIVEKGFYTERDASRLIFQVLD 127
Query: 200 ALEFLHMMGIIYRDLKPENVLVRS---DGHIMLTDFDLSLKGDNSTSTAQLVSD---QSP 253
A+++LH +GI++RDLKPEN+L S D IM++DF LS D + + +P
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 254 PTGDQQPNDCAVDQPPFGNSSCII 277
Q+P AVD G + I+
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYIL 211
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 320 GTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF-- 377
GT Y+APE+++ + + AVD W++G+ + L G PF + ++ EF
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS 239
Query: 378 PKEPSVPGPAKDLIAQLLVKDPTRRM 403
P + AKD I L+ KDP +R
Sbjct: 240 PYWDDISDSAKDFIRHLMEKDPEKRF 265
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 14/146 (9%)
Query: 89 RLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLD--HP 146
++G G G V L ++ ++G A K+MD R+ ++ R + E++ M D H
Sbjct: 52 KIGEGSTGIVCL----AREKHSGRQVAVKMMDLRK-----QQRRELLFNEVVIMRDYQHF 102
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ +Y + +L EF GG L + + R +E + V+ AL +LH
Sbjct: 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHA 159
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDF 232
G+I+RD+K +++L+ DG + L+DF
Sbjct: 160 QGVIHRDIKSDSILLTLDGRVKLSDF 185
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
VGT ++APE+IS + VD W+LGI + E+ G P+ + + R +
Sbjct: 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPY----FSDSPVQAMKRLRDS 256
Query: 378 P-----KEPSVPGPAKDLIAQLLVKDPTRR 402
P V +D + ++LV+DP R
Sbjct: 257 PPPKLKNSHKVSPVLRDFLERMLVRDPQER 286
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 316 MSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARAL 375
F GT YL+PE++ + +G VD W G+ ++ L G PF D + A A
Sbjct: 191 FGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAY 250
Query: 376 EF--PKEPSVPGPAKDLIAQLLVKDPTRRM 403
+F P+ +V AK+LI Q+L +P +R+
Sbjct: 251 DFPSPEWDTVTPEAKNLINQMLTINPAKRI 280
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 28/167 (16%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
D + LG G V K+ + +AAK+++ ++L +R+ + R E I +
Sbjct: 32 DYQLFEELGKGAFSVVRRCVKKTPTQE----YAAKIINTKKLSARDHQKLER-EARICRL 86
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASE------ 196
L HP + L+ ++ + L+ + GG+L F + R Y SE
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGEL-----------FEDIVAREYYSEADASHC 135
Query: 197 ---VVVALEFLHMMGIIYRDLKPENVLVRSD---GHIMLTDFDLSLK 237
++ ++ +H I++RDLKPEN+L+ S + L DF L+++
Sbjct: 136 IHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIE 182
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAK-VMDKRELVSRNKESRARIEREILEMLDHPFL 148
LG+G G V+ V ++ +N FAAK VM E +KE+ R E + + +L HP L
Sbjct: 165 LGTGAFGVVHRVTERATGNN----FAAKFVMTPHE---SDKET-VRKEIQTMSVLRHPTL 216
Query: 149 PTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMG 208
L+ + ++ EF GG+L + +K + AV Y +V L +H
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE-YMRQVCKGLCHMHENN 275
Query: 209 IIYRDLKPENVL--VRSDGHIMLTDFDLSLKGD------NSTSTAQLVSDQSPPTGDQQP 260
++ DLKPEN++ + + L DF L+ D +T TA+ +P + +P
Sbjct: 276 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFA---APEVAEGKP 332
Query: 261 NDCAVDQPPFGNSSCIIPNCIVP 283
D G S I+ + + P
Sbjct: 333 VGYYTDMWSVGVLSYILLSGLSP 355
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 319 VGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFP 378
GT E+ APE+ G+ G D W++G+ + L G +PF G + + TL NV ++ ++
Sbjct: 317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV--KSCDWN 374
Query: 379 KEPS----VPGPAKDLIAQLLVKDPTRRM 403
+ S + KD I +LL+ DP RM
Sbjct: 375 MDDSAFSGISEDGKDFIRKLLLADPNTRM 403
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI--LE 141
L+F+ +LG G+ GSV + + N G A K +L +E EREI L+
Sbjct: 15 LKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILK 69
Query: 142 MLDHPFLPTLYATLDCP--RWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L H + R L+ EF P G L Q+ ++ H ++ Y S++
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQ-YTSQICK 128
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+E+L I+RDL N+LV ++ + + DF L+
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 72/136 (52%), Gaps = 6/136 (4%)
Query: 111 GCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPG 170
G FAAK+++ ++L +R+ + R E I L HP + L+ ++ + L+ + G
Sbjct: 54 GLEFAAKIINTKKLSARDFQKLER-EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTG 112
Query: 171 GDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGH---I 227
G+L + + E+ +++ ++ + H GI++R+LKPEN+L+ S +
Sbjct: 113 GEL--FEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAV 170
Query: 228 MLTDFDLSLKGDNSTS 243
L DF L+++ ++S +
Sbjct: 171 KLADFGLAIEVNDSEA 186
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
F GT YL+PE++ + + VD W G+ ++ L G PF D A + A A ++
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 249
Query: 378 --PKEPSVPGPAKDLIAQLLVKDPTRRM 403
P+ +V AK LI +L +P +R+
Sbjct: 250 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 277
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAK-VMDKRELVSRNKESRARIEREILEMLDHPFL 148
LG+G G V+ V ++ +N FAAK VM E +KE+ R E + + +L HP L
Sbjct: 59 LGTGAFGVVHRVTERATGNN----FAAKFVMTPHE---SDKET-VRKEIQTMSVLRHPTL 110
Query: 149 PTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMG 208
L+ + ++ EF GG+L + +K + AV Y +V L +H
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVE-YMRQVCKGLCHMHENN 169
Query: 209 IIYRDLKPENVL--VRSDGHIMLTDFDLSLKGD------NSTSTAQLVSDQSPPTGDQQP 260
++ DLKPEN++ + + L DF L+ D +T TA+ +P + +P
Sbjct: 170 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFA---APEVAEGKP 226
Query: 261 NDCAVDQPPFGNSSCIIPNCIVP 283
D G S I+ + + P
Sbjct: 227 VGYYTDMWSVGVLSYILLSGLSP 249
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 319 VGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFP 378
GT E+ APE+ G+ G D W++G+ + L G +PF G + + TL NV ++ ++
Sbjct: 211 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV--KSCDWN 268
Query: 379 KEPS----VPGPAKDLIAQLLVKDPTRRM 403
+ S + KD I +LL+ DP RM
Sbjct: 269 MDDSAFSGISEDGKDFIRKLLLADPNTRM 297
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 72/138 (52%), Gaps = 6/138 (4%)
Query: 109 NNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFC 168
G FAAK+++ ++L +R+ + R E I L HP + L+ ++ + L+ +
Sbjct: 29 TTGLEFAAKIINTKKLSARDFQKLER-EARICRKLQHPNIVRLHDSIQEESFHYLVFDLV 87
Query: 169 PGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGH-- 226
GG+L + + E+ +++ ++ + H GI++R+LKPEN+L+ S
Sbjct: 88 TGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 145
Query: 227 -IMLTDFDLSLKGDNSTS 243
+ L DF L+++ ++S +
Sbjct: 146 AVKLADFGLAIEVNDSEA 163
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
F GT YL+PE++ + + VD W G+ ++ L G PF D A + A A ++
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 378 --PKEPSVPGPAKDLIAQLLVKDPTRRM 403
P+ +V AK LI +L +P +R+
Sbjct: 227 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 254
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 111/313 (35%), Gaps = 78/313 (24%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
LG G + + ++ FA K++ K L+ ++ + +E I L H +
Sbjct: 29 LGKGGFAKCFEIS----DADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVV 84
Query: 150 TLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGI 209
+ + + ++ E C L L +R+ K E R+Y ++V+ ++LH +
Sbjct: 85 GFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRV 142
Query: 210 IYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQPP 269
I+RDLK N+ + D + + DF L+ K + G+++ C
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD--------------GERKKTLCGT---- 184
Query: 270 FGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEI 329
PN I P V L + SF
Sbjct: 185 --------PNYIAPEV-------------------------LSKKGHSF----------- 200
Query: 330 ISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKD 389
VD W++G ++ L G PF+ + T + PK + A
Sbjct: 201 --------EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH--INPVAAS 250
Query: 390 LIAQLLVKDPTRR 402
LI ++L DPT R
Sbjct: 251 LIQKMLQTDPTAR 263
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 72/138 (52%), Gaps = 6/138 (4%)
Query: 109 NNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFC 168
G FAAK+++ ++L +R+ + R E I L HP + L+ ++ + L+ +
Sbjct: 29 TTGLEFAAKIINTKKLSARDFQKLER-EARICRKLQHPNIVRLHDSIQEESFHYLVFDLV 87
Query: 169 PGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGH-- 226
GG+L + + E+ +++ ++ + H GI++R+LKPEN+L+ S
Sbjct: 88 TGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 145
Query: 227 -IMLTDFDLSLKGDNSTS 243
+ L DF L+++ ++S +
Sbjct: 146 AVKLADFGLAIEVNDSEA 163
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
F GT YL+PE++ + + VD W G+ ++ L G PF D A + A A ++
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 378 --PKEPSVPGPAKDLIAQLLVKDPTRRM 403
P+ +V AK LI +L +P +R+
Sbjct: 227 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 254
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 18/167 (10%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSS-NNGCFFAAKVMDKRELVSRNKESRARIEREILEML-- 143
+++L S +G +++ S NG +A K+++K+ SR+R+ RE+ +
Sbjct: 13 MYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQ-----AGHSRSRVFREVETLYQC 67
Query: 144 --DHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
+ L + D R+ L+ E GG +L Q K F+E +V AL
Sbjct: 68 QGNKNILELIEFFEDDTRFY-LVFEKLQGGS--ILAHIQKQKHFNEREASRVVRDVAAAL 124
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGH---IMLTDFDL--SLKGDNSTS 243
+FLH GI +RDLKPEN+L S + + DFDL +K +NS +
Sbjct: 125 DFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCT 171
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 26/123 (21%)
Query: 320 GTHEYLAPEII-----SGEGHGNAVDWWTLGIFIFELFYGTTPFKG-------------- 360
G+ EY+APE++ + D W+LG+ ++ + G PF G
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVC 242
Query: 361 -IDHELTLANVVARALEFPKE--PSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQF 417
+ ++ EFP + + AKDLI++LLV+D +R + A + +H +
Sbjct: 243 RVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQR----LSAAQVLQHPW 298
Query: 418 FNG 420
G
Sbjct: 299 VQG 301
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 72/138 (52%), Gaps = 6/138 (4%)
Query: 109 NNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFC 168
G FAAK+++ ++L +R+ + R E I L HP + L+ ++ + L+ +
Sbjct: 28 TTGLEFAAKIINTKKLSARDFQKLER-EARICRKLQHPNIVRLHDSIQEESFHYLVFDLV 86
Query: 169 PGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGH-- 226
GG+L + + E+ +++ ++ + H GI++R+LKPEN+L+ S
Sbjct: 87 TGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGA 144
Query: 227 -IMLTDFDLSLKGDNSTS 243
+ L DF L+++ ++S +
Sbjct: 145 AVKLADFGLAIEVNDSEA 162
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
F GT YL+PE++ + + VD W G+ ++ L G PF D A + A A ++
Sbjct: 166 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 225
Query: 378 --PKEPSVPGPAKDLIAQLLVKDPTRRM 403
P+ +V AK LI +L +P +R+
Sbjct: 226 PSPEWDTVTPEAKSLIDSMLTVNPKKRI 253
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 19/145 (13%)
Query: 88 HRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPF 147
RLG+G G V L+ + G A K ++EL +N+E R +E +I++ L+HP
Sbjct: 21 ERLGTGGFGYV----LRWIHQDTGEQVAIKQC-RQELSPKNRE-RWCLEIQIMKKLNHPN 74
Query: 148 LPTL---------YATLDCPRWSCLLTEFCPGGDLH-VLRQRQPDKRFHESAVRFYASEV 197
+ + A D P L E+C GGDL L Q + E +R S++
Sbjct: 75 VVSAREVPDGLQKLAPNDLP---LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI 131
Query: 198 VVALEFLHMMGIIYRDLKPENVLVR 222
AL +LH II+RDLKPEN++++
Sbjct: 132 SSALRYLHENRIIHRDLKPENIVLQ 156
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPF 358
FVGT +YLAPE++ + + VD+W+ G FE G PF
Sbjct: 184 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 321 THEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKE 380
T Y APE+++ G+ + D W+LG+ ++ + G PF+ D LT + V + K
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG 231
Query: 381 ---------PSVPGPAKDLIAQLLVKDPTRRM 403
+V AKDLI LL DP +R+
Sbjct: 232 DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRL 263
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 14/134 (10%)
Query: 106 KSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLD-HPFLPTLYATLDCPRWSCLL 164
K SN FA K++ KR + KE A L++ + HP + L+ + L+
Sbjct: 33 KKSNQA--FAVKIISKRMEANTQKEITA------LKLCEGHPNIVKLHEVFHDQLHTFLV 84
Query: 165 TEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD 224
E GG+L + + K F E+ + ++V A+ +H +G+++RDLKPEN+L +
Sbjct: 85 MELLNGGEL--FERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDE 142
Query: 225 G---HIMLTDFDLS 235
I + DF +
Sbjct: 143 NDNLEIKIIDFGFA 156
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 19/145 (13%)
Query: 88 HRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPF 147
RLG+G G V L+ + G A K ++EL +N+E R +E +I++ L+HP
Sbjct: 20 ERLGTGGFGYV----LRWIHQDTGEQVAIKQC-RQELSPKNRE-RWCLEIQIMKKLNHPN 73
Query: 148 LPTL---------YATLDCPRWSCLLTEFCPGGDLH-VLRQRQPDKRFHESAVRFYASEV 197
+ + A D P L E+C GGDL L Q + E +R S++
Sbjct: 74 VVSAREVPDGLQKLAPNDLP---LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI 130
Query: 198 VVALEFLHMMGIIYRDLKPENVLVR 222
AL +LH II+RDLKPEN++++
Sbjct: 131 SSALRYLHENRIIHRDLKPENIVLQ 155
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPF 358
FVGT +YLAPE++ + + VD+W+ G FE G PF
Sbjct: 183 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI--LE 141
L+F+ +LG G+ GSV + + N G A K +L +E EREI L+
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILK 66
Query: 142 MLDHPFLPTLYATLDCP--RWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L H + R L+ E+ P G L Q+ ++ H ++ Y S++
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 125
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+E+L I+RDL N+LV ++ + + DF L+
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI--LE 141
L+F+ +LG G+ GSV + + N G A K +L +E EREI L+
Sbjct: 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILK 97
Query: 142 MLDHPFLPTLYATLDCP--RWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L H + R L+ E+ P G L Q+ ++ H ++ Y S++
Sbjct: 98 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 156
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+E+L I+RDL N+LV ++ + + DF L+
Sbjct: 157 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 192
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI--LE 141
L+F+ +LG G+ GSV + + N G A K +L +E EREI L+
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILK 69
Query: 142 MLDHPFLPTLYATLDCP--RWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L H + R L+ E+ P G L Q+ ++ H ++ Y S++
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 128
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+E+L I+RDL N+LV ++ + + DF L+
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ ++G G G VY K+K S G A K + + + S A E +L+ L HP
Sbjct: 26 LEKVGEGTYGVVY----KAKDSQ-GRIVALKRI-RLDAEDEGIPSTAIREISLLKELHHP 79
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ +L + R L+ EF VL + + +S ++ Y +++ + H
Sbjct: 80 NIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTG--LQDSQIKIYLYQLLRGVAHCHQ 137
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
I++RDLKP+N+L+ SDG + L DF L+
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLA 166
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 32/140 (22%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSF-VGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYG 354
KL + G P VRS + V T Y AP+++ G + + +VD W++G E+ G
Sbjct: 159 KLADFGLARAFGIP--VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG 216
Query: 355 TTPFKGIDHELTLANVVA---------------------RALE-FPKEP---SVPGPAK- 388
F G+ + L + + R + F K+P +PG +
Sbjct: 217 KPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQE 276
Query: 389 --DLIAQLLVKDPTRRMGSK 406
DL++ +L DP +R+ ++
Sbjct: 277 GIDLLSNMLCFDPNKRISAR 296
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI--LE 141
L+F+ +LG G+ GSV + + N G A K +L +E EREI L+
Sbjct: 19 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILK 73
Query: 142 MLDHPFLPTLYATLDCP--RWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L H + R L+ E+ P G L Q+ ++ H ++ Y S++
Sbjct: 74 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 132
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+E+L I+RDL N+LV ++ + + DF L+
Sbjct: 133 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 168
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI--LE 141
L+F+ +LG G+ GSV + + N G A K +L +E EREI L+
Sbjct: 17 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILK 71
Query: 142 MLDHPFLPTLYATLDCP--RWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L H + R L+ E+ P G L Q+ ++ H ++ Y S++
Sbjct: 72 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 130
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+E+L I+RDL N+LV ++ + + DF L+
Sbjct: 131 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 166
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI--LE 141
L+F+ +LG G+ GSV + + N G A K +L +E EREI L+
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILK 66
Query: 142 MLDHPFLPTLYATLDCP--RWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L H + R L+ E+ P G L Q+ ++ H ++ Y S++
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 125
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+E+L I+RDL N+LV ++ + + DF L+
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI--LE 141
L+F+ +LG G+ GSV + + N G A K +L +E EREI L+
Sbjct: 10 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILK 64
Query: 142 MLDHPFLPTLYATLDCP--RWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L H + R L+ E+ P G L Q+ ++ H ++ Y S++
Sbjct: 65 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 123
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+E+L I+RDL N+LV ++ + + DF L+
Sbjct: 124 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 159
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI--LE 141
L+F+ +LG G+ GSV + + N G A K +L +E EREI L+
Sbjct: 18 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILK 72
Query: 142 MLDHPFLPTLYATLDCP--RWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L H + R L+ E+ P G L Q+ ++ H ++ Y S++
Sbjct: 73 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 131
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+E+L I+RDL N+LV ++ + + DF L+
Sbjct: 132 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 167
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI--LE 141
L+F+ +LG G+ GSV + + N G A K +L +E EREI L+
Sbjct: 11 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILK 65
Query: 142 MLDHPFLPTLYATLDCP--RWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L H + R L+ E+ P G L Q+ ++ H ++ Y S++
Sbjct: 66 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 124
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+E+L I+RDL N+LV ++ + + DF L+
Sbjct: 125 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 160
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
+D+ H+LG G G VY+ K S A K + + + A + +EI
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLT----VAVKTLKEDTMEVEEFLKEAAVMKEI-- 85
Query: 142 MLDHPFLPTLYA--TLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
HP L L TL+ P + ++TE+ P G+L + + + + A+++
Sbjct: 86 --KHPNLVQLLGVCTLEPPFY--IVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISS 141
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
A+E+L I+RDL N LV + + + DF LS + GD T+ A
Sbjct: 142 AMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHA 189
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ ++G G G VY K+K S ++ E S A E +L+ L HP
Sbjct: 26 LEKVGEGTYGVVY----KAKDSQGRIVALKRIRLDAE--DEGIPSTAIREISLLKELHHP 79
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ +L + R L+ EF VL + + +S ++ Y +++ + H
Sbjct: 80 NIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTG--LQDSQIKIYLYQLLRGVAHCHQ 137
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
I++RDLKP+N+L+ SDG + L DF L+
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLA 166
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 32/140 (22%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSF-VGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYG 354
KL + G P VRS + V T Y AP+++ G + + +VD W++G E+ G
Sbjct: 159 KLADFGLARAFGIP--VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG 216
Query: 355 TTPFKGIDHELTLANVVA---------------------RALE-FPKEP---SVPGPAK- 388
F G+ + L + + R + F K+P +PG +
Sbjct: 217 KPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQE 276
Query: 389 --DLIAQLLVKDPTRRMGSK 406
DL++ +L DP +R+ ++
Sbjct: 277 GIDLLSNMLCFDPNKRISAR 296
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI--LE 141
L+F+ +LG G+ GSV + + N G A K +L +E EREI L+
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILK 66
Query: 142 MLDHPFLPTLYATLDCP--RWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L H + R L+ E+ P G L Q+ ++ H ++ Y S++
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 125
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+E+L I+RDL N+LV ++ + + DF L+
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI--LE 141
L+F+ +LG G+ GSV + + N G A K +L +E EREI L+
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILK 84
Query: 142 MLDHPFLPTLYATLDCP--RWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L H + R L+ E+ P G L Q+ ++ H ++ Y S++
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 143
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+E+L I+RDL N+LV ++ + + DF L+
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI--LE 141
L+F+ +LG G+ GSV + + N G A K +L +E EREI L+
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILK 84
Query: 142 MLDHPFLPTLYATLDCP--RWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L H + R L+ E+ P G L Q+ ++ H ++ Y S++
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 143
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+E+L I+RDL N+LV ++ + + DF L+
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI--LE 141
L+F+ +LG G+ GSV + + N G A K +L +E EREI L+
Sbjct: 16 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILK 70
Query: 142 MLDHPFLPTLYATLDCP--RWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L H + R L+ E+ P G L Q+ ++ H ++ Y S++
Sbjct: 71 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 129
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+E+L I+RDL N+LV ++ + + DF L+
Sbjct: 130 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 165
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 14/138 (10%)
Query: 86 FVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM--L 143
V +GSG+ G L ++ K SN A K +++ E ++ N ++REI+ L
Sbjct: 23 LVKDIGSGNFGVARL--MRDKQSNE--LVAVKYIERGEKIAAN------VKREIINHRSL 72
Query: 144 DHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEF 203
HP + + P ++ E+ GG+L + RF E RF+ +++ + +
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARFFFQQLISGVSY 130
Query: 204 LHMMGIIYRDLKPENVLV 221
H M + +RDLK EN L+
Sbjct: 131 CHAMQVCHRDLKLENTLL 148
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 317 SFVGTHEYLAPEII-SGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARAL 375
S VGT Y+APE++ E G D W+ G+ ++ + G PF+ + + R L
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 376 E----FPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFF 418
P + + LI+++ V DP +R + I+ H++F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKR----ISIPEIRNHEWF 277
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Query: 86 FVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM--L 143
V +GSG+ G L ++ K SN A K +++ E + N ++REI+ L
Sbjct: 22 LVKDIGSGNFGVARL--MRDKQSNE--LVAVKYIERGEKIDEN------VKREIINHRSL 71
Query: 144 DHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEF 203
HP + + P ++ E+ GG+L + RF E RF+ +++ + +
Sbjct: 72 RHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARFFFQQLISGVSY 129
Query: 204 LHMMGIIYRDLKPENVLV 221
H M + +RDLK EN L+
Sbjct: 130 CHAMQVCHRDLKLENTLL 147
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 317 SFVGTHEYLAPEII-SGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARAL 375
S VGT Y+APE++ E G D W+ G+ ++ + G PF+ + + R L
Sbjct: 174 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 233
Query: 376 E----FPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFF 418
P + + LI+++ V DP +R + I+ H++F
Sbjct: 234 NVQYAIPDYVHISPECRHLISRIFVADPAKR----ISIPEIRNHEWF 276
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Query: 86 FVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM--L 143
V +GSG+ G L ++ K SN A K +++ E + N ++REI+ L
Sbjct: 23 LVKDIGSGNFGVARL--MRDKQSNE--LVAVKYIERGEKIDEN------VKREIINHRSL 72
Query: 144 DHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEF 203
HP + + P ++ E+ GG+L + RF E RF+ +++ + +
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARFFFQQLISGVSY 130
Query: 204 LHMMGIIYRDLKPENVLV 221
H M + +RDLK EN L+
Sbjct: 131 CHAMQVCHRDLKLENTLL 148
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 319 VGTHEYLAPEII-SGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALE- 376
VGT Y+APE++ E G D W+ G+ ++ + G PF+ + + R L
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV 236
Query: 377 ---FPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFF 418
P + + LI+++ V DP +R + I+ H++F
Sbjct: 237 QYAIPDYVHISPECRHLISRIFVADPAKR----ISIPEIRNHEWF 277
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 24/167 (14%)
Query: 78 PLTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER 137
P ++ + + V ++G G G VY K+++ G A K + + + + S A E
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREI 55
Query: 138 EILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA-------- 189
+L+ L+HP + L + L+ EF LH Q K+F +++
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLP 105
Query: 190 -VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
++ Y +++ L F H +++RDLKPEN+L+ ++G I L DF L+
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 152
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 34/133 (25%)
Query: 319 VGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
V T Y APEI+ G + + AVD W+LG E+ F G D E+ + R L
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 224
Query: 378 PKE-------------PSVPGPAKD---------------LIAQLLVKDPTRRMGSKMGA 409
P E PS P A+ L++Q+L DP +R+ +K
Sbjct: 225 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK--- 281
Query: 410 TAIKRHQFFNGVN 422
A H FF V
Sbjct: 282 -AALAHPFFQDVT 293
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 12/109 (11%)
Query: 114 FAAKVMDKRELVSRNKESRARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL 173
+A KV+DK + R+ I +L HP + TL D + L+TE GG+L
Sbjct: 55 YAVKVIDKSK---RDPSEEIEI---LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGEL 108
Query: 174 --HVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVL 220
+LRQ K F E F + +E+LH G+++RDLKP N+L
Sbjct: 109 LDKILRQ----KFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNIL 153
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 321 THEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGI-----DHELTLANVVARAL 375
T ++APE++ +G+ D W+LGI ++ + G TPF + LT L
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 376 EFPKEPSVPGPAKDLIAQLLVKDPTRRMGSK 406
+V AKDL++++L DP +R+ +K
Sbjct: 248 SGGNWNTVSETAKDLVSKMLHVDPHQRLTAK 278
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 89 RLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLD--HP 146
++G G G V + ++S +G A K MD R+ ++ R + E++ M D H
Sbjct: 158 KIGEGSTGIVCIATVRS----SGKLVAVKKMDLRK-----QQRRELLFNEVVIMRDYQHE 208
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ +Y + ++ EF GG L + R +E + V+ AL LH
Sbjct: 209 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHA 265
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDF 232
G+I+RD+K +++L+ DG + L+DF
Sbjct: 266 QGVIHRDIKSDSILLTHDGRVKLSDF 291
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 314 RSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFEL------FYGTTPFKGIDHELTL 367
R VGT ++APE+IS +G VD W+LGI + E+ ++ P K + ++
Sbjct: 303 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM--KMIR 360
Query: 368 ANVVARALEFPK-EPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFF 418
N+ R K PS+ G + +LLV+DP +R A + +H F
Sbjct: 361 DNLPPRLKNLHKVSPSLKG----FLDRLLVRDPAQR----ATAAELLKHPFL 404
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 12/109 (11%)
Query: 114 FAAKVMDKRELVSRNKESRARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL 173
+A KV+DK + R+ I +L HP + TL D + L+TE GG+L
Sbjct: 55 YAVKVIDKSK---RDPSEEIEI---LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGEL 108
Query: 174 --HVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVL 220
+LRQ K F E F + +E+LH G+++RDLKP N+L
Sbjct: 109 LDKILRQ----KFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNIL 153
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 321 THEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGI-----DHELTLANVVARAL 375
T ++APE++ +G+ D W+LGI ++ + G TPF + LT L
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 376 EFPKEPSVPGPAKDLIAQLLVKDPTRRMGSK 406
+V AKDL++++L DP +R+ +K
Sbjct: 248 SGGNWNTVSETAKDLVSKMLHVDPHQRLTAK 278
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 314 RSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVAR 373
R + GT Y+APE++S +GH VD W++G ++ L G PF+ + T +
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 374 ALEFPKEPSVPGPAKDLIAQLLVKDPTRR 402
PK + A LI ++L DPT R
Sbjct: 233 EYSIPKH--INPVAASLIQKMLQTDPTAR 259
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
LG G + + ++ FA K++ K L+ ++ + +E I L H +
Sbjct: 25 LGKGGFAKCFEIS----DADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVV 80
Query: 150 TLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGI 209
+ + + ++ E C L L +R+ K E R+Y ++V+ ++LH +
Sbjct: 81 GFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRV 138
Query: 210 IYRDLKPENVLVRSDGHIMLTDFDLSLK----GDNSTSTAQLVSDQSPPTGDQQPNDCAV 265
I+RDLK N+ + D + + DF L+ K G+ + + +P ++ + V
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 198
Query: 266 DQPPFGNSSCIIPNCIVPA----VSCLHPKRRRKKK 297
D G CI+ +V SCL R KK
Sbjct: 199 DVWSIG---CIMYTLLVGKPPFETSCLKETYLRIKK 231
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 130/341 (38%), Gaps = 92/341 (26%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMD--KRELVSRNKESRARIERE 138
L+D + LG G G V+ ++K+ + C +A K + REL +R ++ RE
Sbjct: 4 LTDFEPIQCLGRGGFGVVF----EAKNKVDDCNYAIKRIRLPNREL------AREKVMRE 53
Query: 139 I--LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQ-------------RQPDK 183
+ L L+HP + + + L P L++ Q R +
Sbjct: 54 VKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIE 113
Query: 184 RFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
S ++ A+EFLH G+++RDLKP N+ D D+ GD
Sbjct: 114 ERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMD--------DVVKVGDFGLV 165
Query: 244 TAQLVSDQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGT 303
TA DQ + V P +PA +
Sbjct: 166 TAM----------DQDEEEQTVLTP-------------MPAYA----------------- 185
Query: 304 PEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFK-GID 362
R VGT Y++PE I G + + VD ++LG+ +FEL Y PF ++
Sbjct: 186 ----------RHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME 232
Query: 363 HELTLANVVARALEFPKEPSVPGPAKDLIAQ-LLVKDPTRR 402
TL +V R L+FP + P + ++ Q +L P R
Sbjct: 233 RVRTLTDV--RNLKFPPLFTQKYPCEYVMVQDMLSPSPMER 271
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 314 RSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVAR 373
R + GT Y+APE++S +GH VD W++G ++ L G PF+ + T +
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 374 ALEFPKEPSVPGPAKDLIAQLLVKDPTRR 402
PK + A LI ++L DPT R
Sbjct: 233 EYSIPKH--INPVAASLIQKMLQTDPTAR 259
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
LG G + + ++ FA K++ K L+ ++ + +E I L H +
Sbjct: 25 LGKGGFAKCFEIS----DADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVV 80
Query: 150 TLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGI 209
+ + + ++ E C L L +R+ K E R+Y ++V+ ++LH +
Sbjct: 81 GFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRV 138
Query: 210 IYRDLKPENVLVRSDGHIMLTDFDLSLK----GDNSTSTAQLVSDQSPPTGDQQPNDCAV 265
I+RDLK N+ + D + + DF L+ K G+ + + +P ++ + V
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 198
Query: 266 DQPPFGNSSCIIPNCIVPA----VSCLHPKRRRKKK 297
D G CI+ +V SCL R KK
Sbjct: 199 DVWSIG---CIMYTLLVGKPPFETSCLKETYLRIKK 231
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI--LE 141
L+F+ +LG G+ GSV + + N G A K +L +E EREI L+
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILK 69
Query: 142 MLDHPFLPTLYATLDCP--RWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L H + R L+ E+ P G L Q ++ H ++ Y S++
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQ-YTSQICK 128
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+E+L I+RDL N+LV ++ + + DF L+
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
++ + + V ++G G G VY K+++ G A K + + + + S A E +
Sbjct: 2 SMENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREISL 56
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA---------V 190
L+ L+HP + L + L+ EF LH Q K+F +++ +
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLI 106
Query: 191 RFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ Y +++ L F H +++RDLKPEN+L+ ++G I L DF L+
Sbjct: 107 KSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 151
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 34/133 (25%)
Query: 319 VGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
V T Y APEI+ G + + AVD W+LG E+ F G D E+ + R L
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 223
Query: 378 PKE-------------PSVPGPAKD---------------LIAQLLVKDPTRRMGSKMGA 409
P E PS P A+ L++Q+L DP +R+ +K
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK--- 280
Query: 410 TAIKRHQFFNGVN 422
A H FF V
Sbjct: 281 -AALAHPFFQDVT 292
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 81 LSDLRFVH-RLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
LSD V LG G VY + K K +DK+ + R E +
Sbjct: 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIV---------RTEIGV 101
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYASEV 197
L L HP + L + P L+ E GG+L ++ + +R AV+ ++
Sbjct: 102 LLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK----QI 157
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRS---DGHIMLTDFDLS 235
+ A+ +LH GI++RDLKPEN+L + D + + DF LS
Sbjct: 158 LEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLS 198
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTT 356
K+ + G +IV + ++++ GT Y APEI+ G +G VD W++GI + L G
Sbjct: 191 KIADFGLSKIVEHQVLMKTVC--GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFE 248
Query: 357 PFKGIDHELTLANVVARALEFPKEP---SVPGPAKDLIAQLLVKDPTRRM 403
PF + + + + P V AKDL+ +L+V DP +R+
Sbjct: 249 PFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRL 298
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 24/167 (14%)
Query: 78 PLTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER 137
P ++ + + V ++G G G VY K+++ G A K + + + + S A E
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREI 55
Query: 138 EILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA-------- 189
+L+ L+HP + L + L+ EF LH Q K+F +++
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLP 105
Query: 190 -VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
++ Y +++ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 34/133 (25%)
Query: 319 VGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
V T Y APEI+ G + + AVD W+LG E+ F G D E+ + R L
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 224
Query: 378 PKE-------------PSVPGPAKD---------------LIAQLLVKDPTRRMGSKMGA 409
P E PS P A+ L++Q+L DP +R+ +K
Sbjct: 225 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK--- 281
Query: 410 TAIKRHQFFNGVN 422
A H FF V
Sbjct: 282 -AALAHPFFQDVT 293
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 24/167 (14%)
Query: 78 PLTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER 137
P ++ + + V ++G G G VY K+++ G A K + + + + S A E
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREI 56
Query: 138 EILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA-------- 189
+L+ L+HP + L + L+ EF LH Q K+F +++
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLP 106
Query: 190 -VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
++ Y +++ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 34/133 (25%)
Query: 319 VGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
V T Y APEI+ G + + AVD W+LG E+ F G D E+ + R L
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 225
Query: 378 PKE-------------PSVPGPAKD---------------LIAQLLVKDPTRRMGSKMGA 409
P E PS P A+ L++Q+L DP +R+ +K
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK--- 282
Query: 410 TAIKRHQFFNGVN 422
A H FF V
Sbjct: 283 -AALAHPFFQDVT 294
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 38/87 (43%)
Query: 316 MSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARAL 375
MS G + ++APE+I D W+ G+ ++EL G PF+GID V L
Sbjct: 172 MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKL 231
Query: 376 EFPKEPSVPGPAKDLIAQLLVKDPTRR 402
P + P P L+ DP R
Sbjct: 232 ALPIPSTCPEPFAKLMEDCWNPDPHSR 258
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 21/179 (11%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
+ ++L +G G G VY ++ + A D E +S+ E+ R E +
Sbjct: 4 IDFAELTLEEIIGIGGFGKVY----RAFWIGDEVAVKAARHDPDEDISQTIEN-VRQEAK 58
Query: 139 ILEMLDHPFLPTLYAT-LDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
+ ML HP + L L P CL+ EF GG L+ + KR + +A ++
Sbjct: 59 LFAMLKHPNIIALRGVCLKEPN-LCLVMEFARGGPLN---RVLSGKRIPPDILVNWAVQI 114
Query: 198 VVALEFLH---MMGIIYRDLKPENVLV--------RSDGHIMLTDFDLSLKGDNSTSTA 245
+ +LH ++ II+RDLK N+L+ S+ + +TDF L+ + +T +
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMS 173
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 24/167 (14%)
Query: 78 PLTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER 137
P ++ + + V ++G G G VY K+++ G A K + + + + S A E
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREI 55
Query: 138 EILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA-------- 189
+L+ L+HP + L + L+ EF LH Q K+F +++
Sbjct: 56 SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLP 105
Query: 190 -VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
++ Y +++ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 106 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 34/133 (25%)
Query: 319 VGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
V T Y APEI+ G + + AVD W+LG E+ F G D E+ + R L
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 224
Query: 378 PKE-------------PSVPGPAKD---------------LIAQLLVKDPTRRMGSKMGA 409
P E PS P A+ L++Q+L DP +R+ +K
Sbjct: 225 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK--- 281
Query: 410 TAIKRHQFFNGVN 422
A H FF V
Sbjct: 282 -AALAHPFFQDVT 293
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 89 RLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLD--HP 146
++G G G V + ++S +G A K MD R+ ++ R + E++ M D H
Sbjct: 36 KIGEGSTGIVCIATVRS----SGKLVAVKKMDLRK-----QQRRELLFNEVVIMRDYQHE 86
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ +Y + ++ EF GG L + R +E + V+ AL LH
Sbjct: 87 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHA 143
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDF 232
G+I+RD+K +++L+ DG + L+DF
Sbjct: 144 QGVIHRDIKSDSILLTHDGRVKLSDF 169
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 314 RSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFEL------FYGTTPFKGIDHELTL 367
R VGT ++APE+IS +G VD W+LGI + E+ ++ P K + ++
Sbjct: 181 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM--KMIR 238
Query: 368 ANVVARALEFPK-EPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFF 418
N+ R K PS+ G + +LLV+DP +R A + +H F
Sbjct: 239 DNLPPRLKNLHKVSPSLKG----FLDRLLVRDPAQR----ATAAELLKHPFL 282
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 14/146 (9%)
Query: 89 RLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLD--HP 146
++G G G V + + + G A K MD R+ ++ R + E++ M D H
Sbjct: 52 KIGEGSTGIVCI----ATEKHTGKQVAVKKMDLRK-----QQRRELLFNEVVIMRDYHHD 102
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ +Y++ ++ EF GG L + R +E + V+ AL +LH
Sbjct: 103 NVVDMYSSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIATVCLSVLRALSYLHN 159
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDF 232
G+I+RD+K +++L+ SDG I L+DF
Sbjct: 160 QGVIHRDIKSDSILLTSDGRIKLSDF 185
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPF 358
VGT ++APE+IS +G VD W+LGI + E+ G P+
Sbjct: 201 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPY 241
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 89 RLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLD--HP 146
++G G G V + ++S +G A K MD R+ ++ R + E++ M D H
Sbjct: 31 KIGEGSTGIVCIATVRS----SGKLVAVKKMDLRK-----QQRRELLFNEVVIMRDYQHE 81
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ +Y + ++ EF GG L + R +E + V+ AL LH
Sbjct: 82 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHA 138
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDF 232
G+I+RD+K +++L+ DG + L+DF
Sbjct: 139 QGVIHRDIKSDSILLTHDGRVKLSDF 164
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 314 RSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFEL------FYGTTPFKGIDHELTL 367
R VGT ++APE+IS +G VD W+LGI + E+ ++ P K + ++
Sbjct: 176 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM--KMIR 233
Query: 368 ANVVARALEFPK-EPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFF 418
N+ R K PS+ G + +LLV+DP +R A + +H F
Sbjct: 234 DNLPPRLKNLHKVSPSLKG----FLDRLLVRDPAQR----ATAAELLKHPFL 277
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 89 RLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLD--HP 146
++G G G V + ++S +G A K MD R+ ++ R + E++ M D H
Sbjct: 27 KIGEGSTGIVCIATVRS----SGKLVAVKKMDLRK-----QQRRELLFNEVVIMRDYQHE 77
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ +Y + ++ EF GG L + R +E + V+ AL LH
Sbjct: 78 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHA 134
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDF 232
G+I+RD+K +++L+ DG + L+DF
Sbjct: 135 QGVIHRDIKSDSILLTHDGRVKLSDF 160
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 314 RSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFEL------FYGTTPFKGIDHELTL 367
R VGT ++APE+IS +G VD W+LGI + E+ ++ P K + ++
Sbjct: 172 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM--KMIR 229
Query: 368 ANVVARALEFPK-EPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFF 418
N+ R K PS+ G + +LLV+DP +R A + +H F
Sbjct: 230 DNLPPRLKNLHKVSPSLKG----FLDRLLVRDPAQR----ATAAELLKHPFL 273
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 89 RLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLD--HP 146
++G G G V + ++S +G A K MD R+ ++ R + E++ M D H
Sbjct: 81 KIGEGSTGIVCIATVRS----SGKLVAVKKMDLRK-----QQRRELLFNEVVIMRDYQHE 131
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ +Y + ++ EF GG L + R +E + V+ AL LH
Sbjct: 132 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHA 188
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDF 232
G+I+RD+K +++L+ DG + L+DF
Sbjct: 189 QGVIHRDIKSDSILLTHDGRVKLSDF 214
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 314 RSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFEL------FYGTTPFKGIDHELTL 367
R VGT ++APE+IS +G VD W+LGI + E+ ++ P K + ++
Sbjct: 226 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM--KMIR 283
Query: 368 ANVVARALEFPK-EPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFF 418
N+ R K PS+ G + +LLV+DP +R A + +H F
Sbjct: 284 DNLPPRLKNLHKVSPSLKG----FLDRLLVRDPAQR----ATAAELLKHPFL 327
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 89 RLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLD--HP 146
++G G G V + ++S +G A K MD R+ ++ R + E++ M D H
Sbjct: 38 KIGEGSTGIVCIATVRS----SGKLVAVKKMDLRK-----QQRRELLFNEVVIMRDYQHE 88
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ +Y + ++ EF GG L + R +E + V+ AL LH
Sbjct: 89 NVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHA 145
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDF 232
G+I+RD+K +++L+ DG + L+DF
Sbjct: 146 QGVIHRDIKSDSILLTHDGRVKLSDF 171
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 314 RSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFEL------FYGTTPFKGIDHELTL 367
R VGT ++APE+IS +G VD W+LGI + E+ ++ P K + ++
Sbjct: 183 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM--KMIR 240
Query: 368 ANVVARALEFPK-EPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFF 418
N+ R K PS+ G + +LLV+DP +R A + +H F
Sbjct: 241 DNLPPRLKNLHKVSPSLKG----FLDRLLVRDPAQR----ATAAELLKHPFL 284
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI--LE 141
L+F+ +LG G+ GSV + + N G A K +L +E EREI L+
Sbjct: 13 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK-----KLQHSTEEHLRDFEREIEILK 67
Query: 142 MLDHPFLPTLYATLDCP--RWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L H + R L+ E+ P G L Q+ ++ H ++ Y S++
Sbjct: 68 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 126
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+E+L I+R+L N+LV ++ + + DF L+
Sbjct: 127 GMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLT 162
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 78 PLTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER 137
P ++ + + V ++G G G VY K+++ G A K + + + + S A E
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREI 56
Query: 138 EILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
+L+ L+HP + L + L+ EF DL ++ Y ++
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQL 115
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 34/133 (25%)
Query: 319 VGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
V T Y APEI+ G + + AVD W+LG E+ F G D E+ + R L
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 225
Query: 378 PKE-------------PSVPGPAKD---------------LIAQLLVKDPTRRMGSKMGA 409
P E PS P A+ L++Q+L DP +R+ +K
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK--- 282
Query: 410 TAIKRHQFFNGVN 422
A H FF V
Sbjct: 283 -AALAHPFFQDVT 294
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 66/164 (40%), Gaps = 44/164 (26%)
Query: 115 AAKVMDKRELVSRNKESRARIEREI--LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGD 172
A K+M+K ++ N + RI+ E+ ++ L HP + LY + ++ CL+ E C GG
Sbjct: 55 AIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGH 114
Query: 173 L---------------------------------------HVLRQRQPDKRFHESAVRFY 193
L H R+ D E +
Sbjct: 115 LLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRE-SLDFVQREKLISNI 173
Query: 194 ASEVVVALEFLHMMGIIYRDLKPENVLVRSDG--HIMLTDFDLS 235
++ AL +LH GI +RD+KPEN L ++ I L DF LS
Sbjct: 174 MRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLS 217
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 320 GTHEYLAPEII--SGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
GT ++APE++ + E +G D W+ G+ + L G PF G++ T++ V+ + L F
Sbjct: 236 GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCF 295
Query: 378 --PKEPSVPGPAKDLIAQLLVKDPTRRM 403
P + A+DL++ LL ++ R
Sbjct: 296 ENPNYNVLSPLARDLLSNLLNRNVDERF 323
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 90/216 (41%), Gaps = 17/216 (7%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
LG G + + ++ FA K++ K L+ ++ + +E I L H +
Sbjct: 23 LGKGGFAKCFEIS----DADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVV 78
Query: 150 TLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGI 209
+ + + ++ E C L L +R+ K E R+Y ++V+ ++LH +
Sbjct: 79 GFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRV 136
Query: 210 IYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQ----SPPTGDQQPNDCAV 265
I+RDLK N+ + D + + DF L+ K + +++ +P ++ + V
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 196
Query: 266 DQPPFGNSSCIIPNCIVPA----VSCLHPKRRRKKK 297
D G CI+ +V SCL R KK
Sbjct: 197 DVWSIG---CIMYTLLVGKPPFETSCLKETYLRIKK 229
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 314 RSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVAR 373
R GT Y+APE++S +GH VD W++G ++ L G PF+ + T +
Sbjct: 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 230
Query: 374 ALEFPKEPSVPGPAKDLIAQLLVKDPTRR 402
PK + A LI ++L DPT R
Sbjct: 231 EYSIPKH--INPVAASLIQKMLQTDPTAR 257
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
++ + + V ++G G G VY K+++ G A K + + + + S A E +
Sbjct: 4 SMENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREISL 58
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L+ L+HP + L + L+ EF DL ++ Y +++
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
L F H +++RDLKPEN+L+ ++G I L DF L+
Sbjct: 118 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 153
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 34/133 (25%)
Query: 319 VGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
V T Y APEI+ G + + AVD W+LG E+ F G D E+ + R L
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 225
Query: 378 PKE-------------PSVPGPAKD---------------LIAQLLVKDPTRRMGSKMGA 409
P E PS P A+ L++Q+L DP +R+ +K
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK--- 282
Query: 410 TAIKRHQFFNGVN 422
A H FF V
Sbjct: 283 -AALAHPFFQDVT 294
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
++ + + V ++G G G VY K+++ G A K + + + + S A E +
Sbjct: 5 SMENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREISL 59
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA---------V 190
L+ L+HP + L + L+ EF LH Q K+F +++ +
Sbjct: 60 LKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLI 109
Query: 191 RFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ Y +++ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 110 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 154
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 34/133 (25%)
Query: 319 VGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
V T Y APEI+ G + + AVD W+LG E+ F G D E+ + R L
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 226
Query: 378 PKE-------------PSVPGPAKD---------------LIAQLLVKDPTRRMGSKMGA 409
P E PS P A+ L++Q+L DP +R+ +K
Sbjct: 227 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK--- 283
Query: 410 TAIKRHQFFNGVN 422
A H FF V
Sbjct: 284 -AALAHPFFQDVT 295
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
++ + + V ++G G G VY K+++ G A K + + + + S A E +
Sbjct: 2 SMENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREISL 56
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L+ L+HP + L + L+ EF DL ++ Y +++
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
L F H +++RDLKPEN+L+ ++G I L DF L+
Sbjct: 116 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 151
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 34/133 (25%)
Query: 319 VGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
V T Y APEI+ G + + AVD W+LG E+ F G D E+ + R L
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 223
Query: 378 PKE-------------PSVPGPAKD---------------LIAQLLVKDPTRRMGSKMGA 409
P E PS P A+ L++Q+L DP +R+ +K
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK--- 280
Query: 410 TAIKRHQFFNGVN 422
A H FF V
Sbjct: 281 -AALAHPFFQDVT 292
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 80/167 (47%), Gaps = 24/167 (14%)
Query: 78 PLTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER 137
P + + + V ++G G G VY K+++ G A K + + + + S A E
Sbjct: 6 PEFMENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREI 60
Query: 138 EILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA-------- 189
+L+ L+HP + L + L+ EF LH Q K+F +++
Sbjct: 61 SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLP 110
Query: 190 -VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
++ Y +++ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 111 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 60/155 (38%), Gaps = 35/155 (22%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGT 355
KL + G P+ + V T Y APEI+ G + + AVD W+LG E+
Sbjct: 150 KLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
Query: 356 TPFKGIDHELTLANVVARALEFPKE-------------PSVPGPAKD------------- 389
F G D E+ + R L P E PS P A+
Sbjct: 209 ALFPG-DSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 267
Query: 390 --LIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVN 422
L++Q+L DP +R+ +K A H FF V
Sbjct: 268 RSLLSQMLHYDPNKRISAK----AALAHPFFQDVT 298
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 80/167 (47%), Gaps = 24/167 (14%)
Query: 78 PLTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER 137
P + + + V ++G G G VY K+++ G A K + + + + S A E
Sbjct: 6 PEFMENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREI 60
Query: 138 EILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA-------- 189
+L+ L+HP + L + L+ EF LH Q K+F +++
Sbjct: 61 SLLKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLP 110
Query: 190 -VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
++ Y +++ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 111 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 60/155 (38%), Gaps = 35/155 (22%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGT 355
KL + G P+ + V T Y APEI+ G + + AVD W+LG E+
Sbjct: 150 KLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
Query: 356 TPFKGIDHELTLANVVARALEFPKE-------------PSVPGPAKD------------- 389
F G D E+ + R L P E PS P A+
Sbjct: 209 ALFPG-DSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 267
Query: 390 --LIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVN 422
L++Q+L DP +R+ +K A H FF V
Sbjct: 268 RSLLSQMLHYDPNKRISAK----AALAHPFFQDVT 298
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
++ + + V ++G G G VY K+++ G A K + + + + S A E +
Sbjct: 4 SMENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREISL 58
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA---------V 190
L+ L+HP + L + L+ EF LH Q K+F +++ +
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLI 108
Query: 191 RFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ Y +++ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 34/133 (25%)
Query: 319 VGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
V T Y APEI+ G + + AVD W+LG E+ F G D E+ + R L
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 225
Query: 378 PKE-------------PSVPGPAKD---------------LIAQLLVKDPTRRMGSKMGA 409
P E PS P A+ L++Q+L DP +R+ +K
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK--- 282
Query: 410 TAIKRHQFFNGVN 422
A H FF V
Sbjct: 283 -AALAHPFFQDVT 294
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
++ + + V ++G G G VY K+++ G A K + + + + S A E +
Sbjct: 2 SMENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREISL 56
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA---------V 190
L+ L+HP + L + L+ EF LH Q K+F +++ +
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLI 106
Query: 191 RFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ Y +++ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 107 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 60/155 (38%), Gaps = 35/155 (22%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGT 355
KL + G P+ + V T Y APEI+ G + + AVD W+LG E+
Sbjct: 144 KLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
Query: 356 TPFKGIDHELTLANVVARALEFPKE-------------PSVPGPAKD------------- 389
F G D E+ + R L P E PS P A+
Sbjct: 203 ALFPG-DSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 261
Query: 390 --LIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVN 422
L++Q+L DP +R+ +K A H FF V
Sbjct: 262 RSLLSQMLHYDPNKRISAK----AALAHPFFQDVT 292
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
++ + + V ++G G G VY K+++ G A K + + + + S A E +
Sbjct: 1 SMENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREISL 55
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA---------V 190
L+ L+HP + L + L+ EF LH Q K+F +++ +
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLI 105
Query: 191 RFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ Y +++ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 34/133 (25%)
Query: 319 VGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
V T Y APEI+ G + + AVD W+LG E+ F G D E+ + R L
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 222
Query: 378 PKE-------------PSVPGPAKD---------------LIAQLLVKDPTRRMGSKMGA 409
P E PS P A+ L++Q+L DP +R+ +K
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK--- 279
Query: 410 TAIKRHQFFNGVN 422
A H FF V
Sbjct: 280 -AALAHPFFQDVT 291
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Query: 317 SFVGTHEYLAPEIISGE------GHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
S GT YLAPEII G+G VD W+ G+ ++ L G+ PF L L +
Sbjct: 182 SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI 241
Query: 371 VARALEF--PKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFN 419
++ +F P+ KDL+++ LV P +R ++ H FF
Sbjct: 242 MSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA----HPFFQ 288
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Query: 108 SNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLD-HPFLPTLYATLDCPRWSCLLTE 166
+ G F A +V + RE + E +IL + HP + L T + + L+ +
Sbjct: 53 TGGGSFSAEEVQELREATLK--------EVDILRKVSGHPNIIQLKDTYETNTFFFLVFD 104
Query: 167 FCPGGDLH-VLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDG 225
G+L L ++ + EV+ AL H + I++RDLKPEN+L+ D
Sbjct: 105 LMKKGELFDYLTEKVTLSEKETRKIMRALLEVICAL---HKLNIVHRDLKPENILLDDDM 161
Query: 226 HIMLTDFDLSLKGD 239
+I LTDF S + D
Sbjct: 162 NIKLTDFGFSCQLD 175
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
++ + + V ++G G G VY K+++ G A K + + + + S A E +
Sbjct: 1 SMENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREISL 55
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA---------V 190
L+ L+HP + L + L+ EF LH Q K+F +++ +
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLI 105
Query: 191 RFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ Y +++ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 34/133 (25%)
Query: 319 VGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
V T Y APEI+ G + + AVD W+LG E+ F G D E+ + R L
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 222
Query: 378 PKE-------------PSVPGPAKD---------------LIAQLLVKDPTRRMGSKMGA 409
P E PS P A+ L++Q+L DP +R+ +K
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK--- 279
Query: 410 TAIKRHQFFNGVN 422
A H FF V
Sbjct: 280 -AALAHPFFQDVT 291
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
++ + + V ++G G G VY K+++ G A K + + + + S A E +
Sbjct: 2 SMENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREISL 56
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA---------V 190
L+ L+HP + L + L+ EF LH Q K+F +++ +
Sbjct: 57 LKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLI 106
Query: 191 RFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ Y +++ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 107 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 34/133 (25%)
Query: 319 VGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
V T Y APEI+ G + + AVD W+LG E+ F G D E+ + R L
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 223
Query: 378 PKE-------------PSVPGPAKD---------------LIAQLLVKDPTRRMGSKMGA 409
P E PS P A+ L++Q+L DP +R+ +K
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK--- 280
Query: 410 TAIKRHQFFNGVN 422
A H FF V
Sbjct: 281 -AALAHPFFQDVT 292
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 7/149 (4%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ ++G G G V+ K ++ + G A K + E K+ R E +L+ L HP
Sbjct: 8 IGKIGEGSYGVVF----KCRNRDTGQIVAIKKFLESEDDPVIKKIALR-EIRMLKQLKHP 62
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
L L R L+ E+C LH L + Q + E V+ + + A+ F H
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHK 120
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
I+RD+KPEN+L+ I L DF +
Sbjct: 121 HNCIHRDVKPENILITKHSVIKLCDFGFA 149
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
++ + + V ++G G G VY K+++ G A K + + + + S A E +
Sbjct: 1 SMENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREISL 55
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA---------V 190
L+ L+HP + L + L+ EF LH Q K+F +++ +
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLI 105
Query: 191 RFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ Y +++ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 52/130 (40%), Gaps = 34/130 (26%)
Query: 319 VGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
V T Y APEI+ G + + AVD W+LG E+ F G D E+ + R L
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 222
Query: 378 PKE-------------PSVPGPAKD---------------LIAQLLVKDPTRRMGSKMGA 409
P E PS P A+ L++Q+L DP +R+ +K
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK--- 279
Query: 410 TAIKRHQFFN 419
A H FF
Sbjct: 280 -AALAHPFFQ 288
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
++ + + V ++G G G VY K+++ G A K + + + + S A E +
Sbjct: 1 SMENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREISL 55
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA---------V 190
L+ L+HP + L + L+ EF LH Q K+F +++ +
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLI 105
Query: 191 RFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ Y +++ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 34/133 (25%)
Query: 319 VGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
V T Y APEI+ G + + AVD W+LG E+ F G D E+ + R L
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 222
Query: 378 PKE-------------PSVPGPAKD---------------LIAQLLVKDPTRRMGSKMGA 409
P E PS P A+ L++Q+L DP +R+ +K
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK--- 279
Query: 410 TAIKRHQFFNGVN 422
A H FF V
Sbjct: 280 -AALAHPFFQDVT 291
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 6/169 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++L+ V LGSG G+VY + A K++++ N E E
Sbjct: 35 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMD--EAL 92
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
I+ +DHP L L P L+T+ P G L D + + ++
Sbjct: 93 IMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDN-IGSQLLLNWCVQIA 150
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
+ +L +++RDL NVLV+S H+ +TDF L+ L+GD A
Sbjct: 151 KGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 199
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 20/160 (12%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
LSD+ LG G +V+ + + G FA KV + + R + + R E E+L
Sbjct: 13 LSDI-----LGQGATANVF----RGRHKKTGDLFAIKVFNNISFL-RPVDVQMR-EFEVL 61
Query: 141 EMLDHPFLPTLYATLD--CPRWSCLLTEFCPGGDLHVLRQRQPDKRFH--ESAVRFYASE 196
+ L+H + L+A + R L+ EFCP G L+ + + +P + ES +
Sbjct: 62 KKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLE-EPSNAYGLPESEFLIVLRD 120
Query: 197 VVVALEFLHMMGIIYRDLKPENVL--VRSDGHIM--LTDF 232
VV + L GI++R++KP N++ + DG + LTDF
Sbjct: 121 VVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Query: 312 DVRSMSFVGTHEYLAPEIIS--------GEGHGNAVDWWTLGIFIFELFYGTTPFK 359
D + +S GT EYL P++ + +G VD W++G+ + G+ PF+
Sbjct: 169 DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 24/164 (14%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ + + V ++G G G VY K+++ G A K + + + + S A E +L
Sbjct: 2 MENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLL 56
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA---------VR 191
+ L+HP + L + L+ EF LH Q K+F +++ ++
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIK 106
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
Y +++ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 107 SYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 60/155 (38%), Gaps = 35/155 (22%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGT 355
KL + G P+ + V T Y APEI+ G + + AVD W+LG E+
Sbjct: 143 KLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 356 TPFKGIDHELTLANVVARALEFPKE-------------PSVPGPAKD------------- 389
F G D E+ + R L P E PS P A+
Sbjct: 202 ALFPG-DSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 260
Query: 390 --LIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVN 422
L++Q+L DP +R+ +K A H FF V
Sbjct: 261 RSLLSQMLHYDPNKRISAK----AALAHPFFQDVT 291
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 15/151 (9%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
LG G +V+ + + G FA KV + + R + + R E E+L+ L+H +
Sbjct: 17 LGQGATANVF----RGRHKKTGDLFAIKVFNNISFL-RPVDVQMR-EFEVLKKLNHKNIV 70
Query: 150 TLYATLD--CPRWSCLLTEFCPGGDLHVLRQRQPDKRFH--ESAVRFYASEVVVALEFLH 205
L+A + R L+ EFCP G L+ + + +P + ES +VV + L
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLE-EPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 206 MMGIIYRDLKPENVL--VRSDGHIM--LTDF 232
GI++R++KP N++ + DG + LTDF
Sbjct: 130 ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 8/56 (14%)
Query: 312 DVRSMSFVGTHEYLAPEIIS--------GEGHGNAVDWWTLGIFIFELFYGTTPFK 359
D + + GT EYL P++ + +G VD W++G+ + G+ PF+
Sbjct: 169 DEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 24/164 (14%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ + + V ++G G G VY K+++ G A K + + + + S A E +L
Sbjct: 6 MENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLL 60
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA---------VR 191
+ L+HP + L + L+ EF LH Q K+F +++ ++
Sbjct: 61 KELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIK 110
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
Y +++ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 111 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 154
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 65/166 (39%), Gaps = 37/166 (22%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGT 355
KL + G P+ + V T Y APEI+ G + + AVD W+LG E+
Sbjct: 147 KLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
Query: 356 TPFKGIDHELTLANVVARALEFPKE-------------PSVPGPAKD------------- 389
F G D E+ + R L P E PS P A+
Sbjct: 206 ALFPG-DSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 264
Query: 390 --LIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVNWAL--LRCAKP 431
L++Q+L DP +R+ +K A H FF V + LR +P
Sbjct: 265 RSLLSQMLHYDPNKRISAK----AALAHPFFQDVTKPVPHLRLERP 306
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 24/164 (14%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ + + V ++G G G VY K+++ G A K + + + + S A E +L
Sbjct: 2 MENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLL 56
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA---------VR 191
+ L+HP + L + L+ EF LH Q K+F +++ ++
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIK 106
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
Y +++ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 107 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 60/155 (38%), Gaps = 35/155 (22%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGT 355
KL + G P+ + V T Y APEI+ G + + AVD W+LG E+
Sbjct: 143 KLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 356 TPFKGIDHELTLANVVARALEFPKE-------------PSVPGPAKD------------- 389
F G D E+ + R L P E PS P A+
Sbjct: 202 ALFPG-DSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 260
Query: 390 --LIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVN 422
L++Q+L DP +R+ +K A H FF V
Sbjct: 261 RSLLSQMLHYDPNKRISAK----AALAHPFFQDVT 291
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 24/164 (14%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ + + V ++G G G VY K+++ G A K + + + + S A E +L
Sbjct: 1 MENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLL 55
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA---------VR 191
+ L+HP + L + L+ EF LH Q K+F +++ ++
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIK 105
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
Y +++ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 106 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 34/133 (25%)
Query: 319 VGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
V T Y APEI+ G + + AVD W+LG E+ F G D E+ + R L
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 221
Query: 378 PKE-------------PSVPGPAKD---------------LIAQLLVKDPTRRMGSKMGA 409
P E PS P A+ L++Q+L DP +R+ +K
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK--- 278
Query: 410 TAIKRHQFFNGVN 422
A H FF V
Sbjct: 279 -AALAHPFFQDVT 290
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 24/164 (14%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ + + V ++G G G VY K+++ G A K + + + + S A E +L
Sbjct: 3 MENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLL 57
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA---------VR 191
+ L+HP + L + L+ EF LH Q K+F +++ ++
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIK 107
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
Y +++ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 108 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 34/133 (25%)
Query: 319 VGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
V T Y APEI+ G + + AVD W+LG E+ F G D E+ + R L
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 223
Query: 378 PKE-------------PSVPGPAKD---------------LIAQLLVKDPTRRMGSKMGA 409
P E PS P A+ L++Q+L DP +R+ +K
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK--- 280
Query: 410 TAIKRHQFFNGVN 422
A H FF V
Sbjct: 281 -AALAHPFFQDVT 292
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 24/164 (14%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ + + V ++G G G VY K+++ G A K + + + + S A E +L
Sbjct: 2 MENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLL 56
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA---------VR 191
+ L+HP + L + L+ EF LH Q K+F +++ ++
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIK 106
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
Y +++ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 107 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 60/155 (38%), Gaps = 35/155 (22%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGT 355
KL + G P+ + V T Y APEI+ G + + AVD W+LG E+
Sbjct: 143 KLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 356 TPFKGIDHELTLANVVARALEFPKE-------------PSVPGPAKD------------- 389
F G D E+ + R L P E PS P A+
Sbjct: 202 ALFPG-DSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 260
Query: 390 --LIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVN 422
L++Q+L DP +R+ +K A H FF V
Sbjct: 261 RSLLSQMLHYDPNKRISAK----AALAHPFFQDVT 291
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 24/164 (14%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ + + V ++G G G VY K+++ G A K + + + + S A E +L
Sbjct: 1 MENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLL 55
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA---------VR 191
+ L+HP + L + L+ EF LH Q K+F +++ ++
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIK 105
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
Y +++ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 106 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 60/155 (38%), Gaps = 35/155 (22%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGT 355
KL + G P+ + V T Y APEI+ G + + AVD W+LG E+
Sbjct: 142 KLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 356 TPFKGIDHELTLANVVARALEFPKE-------------PSVPGPAKD------------- 389
F G D E+ + R L P E PS P A+
Sbjct: 201 ALFPG-DSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 259
Query: 390 --LIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVN 422
L++Q+L DP +R+ +K A H FF V
Sbjct: 260 RSLLSQMLHYDPNKRISAK----AALAHPFFQDVT 290
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 63/148 (42%), Gaps = 21/148 (14%)
Query: 89 RLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFL 148
RLG G G V+ ++ K F V R V R +E A L P +
Sbjct: 100 RLGRGSFGEVHRMEDKQTG------FQCAVKKVRLEVFRAEELMA------CAGLTSPRI 147
Query: 149 PTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQ---PDKRFHESAVRFYASEVVVALEFLH 205
LY + W + E GG L L + Q P+ R +Y + + LE+LH
Sbjct: 148 VPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDR-----ALYYLGQALEGLEYLH 202
Query: 206 MMGIIYRDLKPENVLVRSDG-HIMLTDF 232
I++ D+K +NVL+ SDG H L DF
Sbjct: 203 SRRILHGDVKADNVLLSSDGSHAALCDF 230
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
++ + + V ++G G G VY K+++ G A K + + + + S A E +
Sbjct: 1 SMENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREISL 55
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA---------V 190
L+ L+HP + L + L+ EF LH Q K F +++ +
Sbjct: 56 LKELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKDFMDASALTGIPLPLI 105
Query: 191 RFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ Y +++ L F H +++RDLKPEN+L+ ++G I L DF L+
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 150
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 34/133 (25%)
Query: 319 VGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
V T Y APEI+ G + + AVD W+LG E+ F G D E+ + R L
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 222
Query: 378 PKE-------------PSVPGPAKD---------------LIAQLLVKDPTRRMGSKMGA 409
P E PS P A+ L++Q+L DP +R+ +K
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK--- 279
Query: 410 TAIKRHQFFNGVN 422
A H FF V
Sbjct: 280 -AALAHPFFQDVT 291
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 24/164 (14%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ + + V ++G G G VY K+++ G A K + + + + S A E +L
Sbjct: 2 MENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLL 56
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA---------VR 191
+ L+HP + L + L+ EF LH Q K+F +++ ++
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIK 106
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
Y +++ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 107 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 60/155 (38%), Gaps = 35/155 (22%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGT 355
KL + G P+ + V T Y APEI+ G + + AVD W+LG E+
Sbjct: 143 KLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 356 TPFKGIDHELTLANVVARALEFPKE-------------PSVPGPAKD------------- 389
F G D E+ + R L P E PS P A+
Sbjct: 202 ALFPG-DSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 260
Query: 390 --LIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVN 422
L++Q+L DP +R+ +K A H FF V
Sbjct: 261 RSLLSQMLHYDPNKRISAK----AALAHPFFQDVT 291
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 98/266 (36%), Gaps = 94/266 (35%)
Query: 172 DLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTD 231
DLH + Q + ++++ + + A++ LH +I+RDLKP N+L+ S+ + + D
Sbjct: 99 DLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCD 155
Query: 232 FDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPK 291
F L+ D S +D S PTG Q
Sbjct: 156 FGLARIIDESA------ADNSEPTGQQS-------------------------------- 177
Query: 292 RRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFE 350
G E VA T Y APE+ ++ + A+D W+ G + E
Sbjct: 178 ----------GMTEYVA------------TRWYRAPEVMLTSAKYSRAMDVWSCGCILAE 215
Query: 351 LFYGTTPFKGID--HELTLANVVA---------------RALEFPKE------------- 380
LF F G D H+L L + RA E+ K
Sbjct: 216 LFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMF 275
Query: 381 PSVPGPAKDLIAQLLVKDPTRRMGSK 406
P V DL+ ++LV DP +R+ +K
Sbjct: 276 PRVNPKGIDLLQRMLVFDPAKRITAK 301
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 24/164 (14%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ + + V ++G G G VY K+++ G A K + + + + S A E +L
Sbjct: 1 MENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLL 55
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA---------VR 191
+ L+HP + L + L+ EF LH Q K+F +++ ++
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIK 105
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
Y +++ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 106 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 34/133 (25%)
Query: 319 VGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
V T Y APEI+ G + + AVD W+LG E+ F G D E+ + R L
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 221
Query: 378 PKE-------------PSVPGPAKD---------------LIAQLLVKDPTRRMGSKMGA 409
P E PS P A+ L++Q+L DP +R+ +K
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK--- 278
Query: 410 TAIKRHQFFNGVN 422
A H FF V
Sbjct: 279 -AALAHPFFQDVT 290
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 98/266 (36%), Gaps = 94/266 (35%)
Query: 172 DLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTD 231
DLH + Q + ++++ + + A++ LH +I+RDLKP N+L+ S+ + + D
Sbjct: 99 DLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCD 155
Query: 232 FDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPK 291
F L+ D S +D S PTG Q
Sbjct: 156 FGLARIIDESA------ADNSEPTGQQS-------------------------------- 177
Query: 292 RRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFE 350
G E VA T Y APE+ ++ + A+D W+ G + E
Sbjct: 178 ----------GMTEXVA------------TRWYRAPEVMLTSAKYSRAMDVWSCGCILAE 215
Query: 351 LFYGTTPFKGID--HELTLANVVA---------------RALEFPKE------------- 380
LF F G D H+L L + RA E+ K
Sbjct: 216 LFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMF 275
Query: 381 PSVPGPAKDLIAQLLVKDPTRRMGSK 406
P V DL+ ++LV DP +R+ +K
Sbjct: 276 PRVNPKGIDLLQRMLVFDPAKRITAK 301
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 98/266 (36%), Gaps = 94/266 (35%)
Query: 172 DLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTD 231
DLH + Q + ++++ + + A++ LH +I+RDLKP N+L+ S+ + + D
Sbjct: 99 DLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCD 155
Query: 232 FDLSLKGDNSTSTAQLVSDQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPK 291
F L+ D S +D S PTG Q
Sbjct: 156 FGLARIIDESA------ADNSEPTGQQS-------------------------------- 177
Query: 292 RRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFE 350
G E VA T Y APE+ ++ + A+D W+ G + E
Sbjct: 178 ----------GMVEFVA------------TRWYRAPEVMLTSAKYSRAMDVWSCGCILAE 215
Query: 351 LFYGTTPFKGID--HELTLANVVA---------------RALEFPKE------------- 380
LF F G D H+L L + RA E+ K
Sbjct: 216 LFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMF 275
Query: 381 PSVPGPAKDLIAQLLVKDPTRRMGSK 406
P V DL+ ++LV DP +R+ +K
Sbjct: 276 PRVNPKGIDLLQRMLVFDPAKRITAK 301
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 12/108 (11%)
Query: 320 GTHEYLAPEIISGE------GHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVAR 373
GT YLAPEII G+G VD W+ G+ ++ L G+ PF L L +++
Sbjct: 172 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG 231
Query: 374 ALEF--PKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFN 419
+F P+ KDL+++ LV P +R ++ H FF
Sbjct: 232 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA----HPFFQ 275
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Query: 108 SNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLD-HPFLPTLYATLDCPRWSCLLTE 166
+ G F A +V + RE + E +IL + HP + L T + + L+ +
Sbjct: 40 TGGGSFSAEEVQELREATLK--------EVDILRKVSGHPNIIQLKDTYETNTFFFLVFD 91
Query: 167 FCPGGDLH-VLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDG 225
G+L L ++ + EV+ AL H + I++RDLKPEN+L+ D
Sbjct: 92 LMKKGELFDYLTEKVTLSEKETRKIMRALLEVICAL---HKLNIVHRDLKPENILLDDDM 148
Query: 226 HIMLTDFDLSLKGD 239
+I LTDF S + D
Sbjct: 149 NIKLTDFGFSCQLD 162
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 63/148 (42%), Gaps = 21/148 (14%)
Query: 89 RLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFL 148
RLG G G V+ ++ K F V R V R +E A L P +
Sbjct: 81 RLGRGSFGEVHRMEDKQTG------FQCAVKKVRLEVFRAEELMA------CAGLTSPRI 128
Query: 149 PTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQ---PDKRFHESAVRFYASEVVVALEFLH 205
LY + W + E GG L L + Q P+ R +Y + + LE+LH
Sbjct: 129 VPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDR-----ALYYLGQALEGLEYLH 183
Query: 206 MMGIIYRDLKPENVLVRSDG-HIMLTDF 232
I++ D+K +NVL+ SDG H L DF
Sbjct: 184 SRRILHGDVKADNVLLSSDGSHAALCDF 211
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 12/108 (11%)
Query: 320 GTHEYLAPEIISGE------GHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVAR 373
GT YLAPEII G+G VD W+ G+ ++ L G+ PF L L +++
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG 244
Query: 374 ALEF--PKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFN 419
+F P+ KDL+++ LV P +R ++ H FF
Sbjct: 245 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA----HPFFQ 288
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Query: 108 SNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLD-HPFLPTLYATLDCPRWSCLLTE 166
+ G F A +V + RE + E +IL + HP + L T + + L+ +
Sbjct: 53 TGGGSFSAEEVQELREATLK--------EVDILRKVSGHPNIIQLKDTYETNTFFFLVFD 104
Query: 167 FCPGGDLH-VLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDG 225
G+L L ++ + EV+ AL H + I++RDLKPEN+L+ D
Sbjct: 105 LMKKGELFDYLTEKVTLSEKETRKIMRALLEVICAL---HKLNIVHRDLKPENILLDDDM 161
Query: 226 HIMLTDFDLSLKGD 239
+I LTDF S + D
Sbjct: 162 NIKLTDFGFSCQLD 175
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 24/158 (15%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
V ++G G G VY K+++ G A K + + + + S A E +L+ L+HP
Sbjct: 7 VEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLLKELNHP 61
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA---------VRFYASEV 197
+ L + L+ EF LH Q K+F +++ ++ Y ++
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 60/155 (38%), Gaps = 35/155 (22%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGT 355
KL + G P+ + V T Y APEI+ G + + AVD W+LG E+
Sbjct: 142 KLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 356 TPFKGIDHELTLANVVARALEFPKE-------------PSVPGPAKD------------- 389
F G D E+ + R L P E PS P A+
Sbjct: 201 ALFPG-DSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 259
Query: 390 --LIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVN 422
L++Q+L DP +R+ +K A H FF V
Sbjct: 260 RSLLSQMLHYDPNKRISAK----AALAHPFFQDVT 290
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 6/169 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++L+ V LGSG G+VY + A K++++ N E E
Sbjct: 12 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMD--EAL 69
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
I+ +DHP L L P L+T+ P G L D + + ++
Sbjct: 70 IMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDN-IGSQLLLNWCVQIA 127
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
+ +L +++RDL NVLV+S H+ +TDF L+ L+GD A
Sbjct: 128 KGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 176
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
++ + + V ++G G G VY K+++ G A K + + + + S A E +
Sbjct: 4 SMENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREISL 58
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L+ L+HP + L + L+ EF DL ++ Y +++
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 34/133 (25%)
Query: 319 VGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
V T Y APEI+ G + + AVD W+LG E+ F G D E+ + R L
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 225
Query: 378 PKE-------------PSVPGPAKD---------------LIAQLLVKDPTRRMGSKMGA 409
P E PS P A+ L++Q+L DP +R+ +K
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK--- 282
Query: 410 TAIKRHQFFNGVN 422
A H FF V
Sbjct: 283 -AALAHPFFQDVT 294
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
+D+ H+LG G G VY K S A K + + + A + +EI
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLT----VAVKTLKEDTMEVEEFLKEAAVMKEI-- 71
Query: 142 MLDHPFLPTLYATLDCPRW--SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
HP L L C R ++TEF G+L + + + + + A+++
Sbjct: 72 --KHPNLVQLLGV--CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
A+E+L I+RDL N LV + + + DF LS + GD T+ A
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 175
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 13/159 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAK--VMDKRELVSRNKESRARIEREI 139
S + + +LG+G +VY K + G + A K +D E S A E +
Sbjct: 5 SQFKQLEKLGNGTYATVY----KGLNKTTGVYVALKEVKLDSEE----GTPSTAIREISL 56
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQR---QPDKRFHESAVRFYASE 196
++ L H + LY + L+ EF + R + + V+++ +
Sbjct: 57 MKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ 116
Query: 197 VVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
++ L F H I++RDLKP+N+L+ G + L DF L+
Sbjct: 117 LLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLA 155
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 292 RRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFE 350
+R + KLG+ G P++ S S V T Y AP+++ G + ++D W+ G + E
Sbjct: 143 KRGQLKLGDFGLARAFGIPVNTFS-SEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAE 201
Query: 351 LFYGTTPFKGIDHELTLANVVARALEFPKEPSVPGPAK 388
+ G F G + E L ++ + P E P K
Sbjct: 202 MITGKPLFPGTNDEEQL-KLIFDIMGTPNESLWPSVTK 238
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 80 TLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI 139
++ + + V ++G G G VY K+++ G A K + + + + S A E +
Sbjct: 3 SMENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREISL 57
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L+ L+HP + L + L+ EF DL ++ Y +++
Sbjct: 58 LKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 34/133 (25%)
Query: 319 VGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
V T Y APEI+ G + + AVD W+LG E+ F G D E+ + R L
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 224
Query: 378 PKE-------------PSVPGPAKD---------------LIAQLLVKDPTRRMGSKMGA 409
P E PS P A+ L++Q+L DP +R+ +K
Sbjct: 225 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK--- 281
Query: 410 TAIKRHQFFNGVN 422
A H FF V
Sbjct: 282 -AALAHPFFQDVT 293
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
+D+ H+LG G G VY K S A K + + + A + +EI
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLT----VAVKTLKEDTMEVEEFLKEAAVMKEI-- 70
Query: 142 MLDHPFLPTLYATLDCPRW--SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
HP L L C R ++TEF G+L + + + + + A+++
Sbjct: 71 --KHPNLVQLLGV--CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 126
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
A+E+L I+RDL N LV + + + DF LS + GD T+ A
Sbjct: 127 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 174
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
+D+ H+LG G G VY K S A K + + + A + +EI
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLT----VAVKTLKEDTMEVEEFLKEAAVMKEI-- 71
Query: 142 MLDHPFLPTLYATLDCPRW--SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
HP L L C R ++TEF G+L + + + + + A+++
Sbjct: 72 --KHPNLVQLLGV--CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
A+E+L I+RDL N LV + + + DF LS + GD T+ A
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 175
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
+D+ H+LG G G VY K S A K + + + A + +EI
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLT----VAVKTLKEDTMEVEEFLKEAAVMKEI-- 71
Query: 142 MLDHPFLPTLYATLDCPRW--SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
HP L L C R ++TEF G+L + + + + + A+++
Sbjct: 72 --KHPNLVQLLGV--CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
A+E+L I+RDL N LV + + + DF LS + GD T+ A
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 175
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
+D+ H+LG G G VY K S A K + + + A + +EI
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLT----VAVKTLKEDTMEVEEFLKEAAVMKEI-- 66
Query: 142 MLDHPFLPTLYATLDCPRW--SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
HP L L C R ++TEF G+L + + + + + A+++
Sbjct: 67 --KHPNLVQLLGV--CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
A+E+L I+RDL N LV + + + DF LS + GD T+ A
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
+D+ H+LG G G VY K S A K + + + A + +EI
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLT----VAVKTLKEDTMEVEEFLKEAAVMKEI-- 66
Query: 142 MLDHPFLPTLYATLDCPRW--SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
HP L L C R ++TEF G+L + + + + + A+++
Sbjct: 67 --KHPNLVQLLGV--CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
A+E+L I+RDL N LV + + + DF LS + GD T+ A
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
+D+ H+LG G G VY K S A K + + + A + +EI
Sbjct: 26 TDITMKHKLGGGQYGEVYEGVWKKYSLT----VAVKTLKEDTMEVEEFLKEAAVMKEI-- 79
Query: 142 MLDHPFLPTLYATLDCPRW--SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
HP L L C R ++TEF G+L + + + + + A+++
Sbjct: 80 --KHPNLVQLLGV--CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 135
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
A+E+L I+RDL N LV + + + DF LS + GD T+ A
Sbjct: 136 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 183
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
+D+ H+LG G G VY K S A K + + + A + +EI
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLT----VAVKTLKEDTMEVEEFLKEAAVMKEI-- 68
Query: 142 MLDHPFLPTLYATLDCPRW--SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
HP L L C R ++TEF G+L + + + + + A+++
Sbjct: 69 --KHPNLVQLLGV--CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
A+E+L I+RDL N LV + + + DF LS + GD T+ A
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 172
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 24/167 (14%)
Query: 78 PLTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER 137
P ++ + + V ++G G G VY K+++ G A K + + + + S A E
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREI 56
Query: 138 EILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA-------- 189
+L+ L+HP + L + L+ E HV Q K+F +++
Sbjct: 57 SLLKELNHPNIVKLLDVIHTENKLYLVFE-------HV---DQDLKKFMDASALTGIPLP 106
Query: 190 -VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
++ Y +++ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 107 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 34/133 (25%)
Query: 319 VGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
V T Y APEI+ G + + AVD W+LG E+ F G D E+ + R L
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG-DSEIDQLFRIFRTLGT 225
Query: 378 PKE-------------PSVPGPAKD---------------LIAQLLVKDPTRRMGSKMGA 409
P E PS P A+ L++Q+L DP +R+ +K
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK--- 282
Query: 410 TAIKRHQFFNGVN 422
A H FF V
Sbjct: 283 -AALAHPFFQDVT 294
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
+D+ H+LG G G VY K S A K + + + A + +EI
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLT----VAVKTLKEDTMEVEEFLKEAAVMKEI-- 68
Query: 142 MLDHPFLPTLYATLDCPRW--SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
HP L L C R ++TEF G+L + + + + + A+++
Sbjct: 69 --KHPNLVQLLGV--CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
A+E+L I+RDL N LV + + + DF LS + GD T+ A
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 172
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
+D+ H+LG G G VY K S A K + + + A + +EI
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLT----VAVKTLKEDTMEVEEFLKEAAVMKEI-- 68
Query: 142 MLDHPFLPTLYATLDCPRW--SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
HP L L C R ++TEF G+L + + + + + A+++
Sbjct: 69 --KHPNLVQLLGV--CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
A+E+L I+RDL N LV + + + DF LS + GD T+ A
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPA 172
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 14/168 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
+D+ H+LG G G VY K S A K + + + A + +EI
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLT----VAVKTLKEDTMEVEEFLKEAAVMKEI-- 64
Query: 142 MLDHPFLPTLYATLDCPRW--SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
HP L L C R ++TEF G+L + + + + A+++
Sbjct: 65 --KHPNLVQLLGV--CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
A+E+L I+RDL N LV + + + DF LS + GD T+ A
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 168
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
+D+ H+LG G G VY K S A K + + + A + +EI
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLT----VAVKTLKEDTMEVEEFLKEAAVMKEI-- 67
Query: 142 MLDHPFLPTLYATLDCPRW--SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
HP L L C R ++TEF G+L + + + + + A+++
Sbjct: 68 --KHPNLVQLLGV--CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
A+E+L I+RDL N LV + + + DF LS + GD T+ A
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPA 171
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 66/159 (41%), Gaps = 15/159 (9%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI-----LE 141
V +G G G+VY K++ ++G F A K + RE+ LE
Sbjct: 14 VAEIGVGAYGTVY----KARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLE 69
Query: 142 MLDHPFLPTLYATLDCPRWS-----CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASE 196
+HP + L R L+ E DL + P ++ +
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 128
Query: 197 VVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ L+FLH I++RDLKPEN+LV S G + L DF L+
Sbjct: 129 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 167
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESR-ARIEREI-----L 140
V +G G G V+ K++ NG F A KR V +E RE+ L
Sbjct: 16 VAEIGEGAYGKVF----KARDLKNGGRFVAL---KRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 141 EMLDHPFLPTLYATLDCPRWS-----CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYAS 195
E +HP + L+ R L+ E DL + P+ ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+++ L+FLH +++RDLKP+N+LV S G I L DF L+
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 27/134 (20%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTT 356
KL + G I + + + S+ V T Y APE++ + VD W++G E+F
Sbjct: 160 KLADFGLARIYSFQMALTSV--VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP 217
Query: 357 PFKG---IDHELTLANVVARALE--FPKEPSVPGPA--------------------KDLI 391
F+G +D + +V+ E +P++ ++P A KDL+
Sbjct: 218 LFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLL 277
Query: 392 AQLLVKDPTRRMGS 405
+ L +P +R+ +
Sbjct: 278 LKCLTFNPAKRISA 291
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 128 NKESRARIEREILEMLDHPFLPTLYATL--DCPRWSCLLTEFCPGGDLHVLRQRQPDKRF 185
N E+ + E ++L L H + L L + + ++ E+C G + + P+KRF
Sbjct: 48 NGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRF 106
Query: 186 HESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS-----LKGDN 240
Y +++ LE+LH GI+++D+KP N+L+ + G + ++ ++ D+
Sbjct: 107 PVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADD 166
Query: 241 STSTAQLVSDQSPP 254
+ T+Q PP
Sbjct: 167 TCRTSQGSPAFQPP 180
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 320 GTHEYLAPEIISG--EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
G+ + PEI +G G VD W+ G+ ++ + G PF+G + N+ +
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAI 232
Query: 378 PKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFF 418
P + P DL+ +L +P +R + I++H +F
Sbjct: 233 PGDCGP--PLSDLLKGMLEYEPAKRFSIRQ----IRQHSWF 267
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 14/168 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
+D+ H+LG G G VY K S A K + + + A + +EI
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLT----VAVKTLKEDTMEVEEFLKEAAVMKEI-- 71
Query: 142 MLDHPFLPTLYATLDCPRW--SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
HP L L C R ++TEF G+L + + + + A+++
Sbjct: 72 --KHPNLVQLLGV--CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 127
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
A+E+L I+RDL N LV + + + DF LS + GD T+ A
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 175
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
+D+ H+LG G G VY K S A K + + + A + +EI
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLT----VAVKTLKEDTMEVEEFLKEAAVMKEI-- 66
Query: 142 MLDHPFLPTLYATLDCPRW--SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFY-ASEVV 198
HP L L C R ++TEF G+L + R+ +++ + V Y A+++
Sbjct: 67 --KHPNLVQLLGV--CTREPPFYIITEFMTYGNL-LDYLRECNRQEVSAVVLLYMATQIS 121
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
A+E+L I+RDL N LV + + + DF LS + GD T+ A
Sbjct: 122 SAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESR-ARIEREI-----L 140
V +G G G V+ K++ NG F A KR V +E RE+ L
Sbjct: 16 VAEIGEGAYGKVF----KARDLKNGGRFVAL---KRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 141 EMLDHPFLPTLYATLDCPRWS-----CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYAS 195
E +HP + L+ R L+ E DL + P+ ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+++ L+FLH +++RDLKP+N+LV S G I L DF L+
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 27/134 (20%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTT 356
KL + G I + + + S+ V T Y APE++ + VD W++G E+F
Sbjct: 160 KLADFGLARIYSFQMALTSV--VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP 217
Query: 357 PFKG---IDHELTLANVVARALE--FPKEPSVPGPA--------------------KDLI 391
F+G +D + +V+ E +P++ ++P A KDL+
Sbjct: 218 LFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLL 277
Query: 392 AQLLVKDPTRRMGS 405
+ L +P +R+ +
Sbjct: 278 LKCLTFNPAKRISA 291
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 14/168 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
+D+ H+LG G G VY K S A K + + + A + +EI
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLT----VAVKTLKEDTMEVEEFLKEAAVMKEI-- 66
Query: 142 MLDHPFLPTLYATLDCPRW--SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
HP L L C R ++TEF G+L + + + + A+++
Sbjct: 67 --KHPNLVQLLGV--CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
A+E+L I+RDL N LV + + + DF LS + GD T+ A
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 71/174 (40%), Gaps = 5/174 (2%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
L+ + LG G G V L + + N G A K + N + + E EIL L
Sbjct: 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNL 80
Query: 144 DHPFLPTLYA--TLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
H + T D L+ EF P G L + +K + ++ YA ++ +
Sbjct: 81 YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLK-YAVQICKGM 139
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPT 255
++L ++RDL NVLV S+ + + DF L+ + + D+ P
Sbjct: 140 DYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV 193
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAK---VMDKRELVSRNKESRARIEREILEML 143
V +G G G+VY K++ ++G F A K V + E + + + R LE
Sbjct: 9 VAEIGVGAYGTVY----KARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRR-LEAF 63
Query: 144 DHPFLPTLYATLDCPRWS-----CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
+HP + L R L+ E DL + P ++ + +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
L+FLH I++RDLKPEN+LV S G + L DF L+
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAK---VMDKRELVSRNKESRARIEREILEML 143
V +G G G+VY K++ ++G F A K V + E + + + R LE
Sbjct: 9 VAEIGVGAYGTVY----KARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRR-LEAF 63
Query: 144 DHPFLPTLYATLDCPRWS-----CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
+HP + L R L+ E DL + P ++ + +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
L+FLH I++RDLKPEN+LV S G + L DF L+
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESR-ARIEREI-----L 140
V +G G G V+ K++ NG F A KR V +E RE+ L
Sbjct: 16 VAEIGEGAYGKVF----KARDLKNGGRFVAL---KRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 141 EMLDHPFLPTLYATLDCPRWS-----CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYAS 195
E +HP + L+ R L+ E DL + P+ ++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+++ L+FLH +++RDLKP+N+LV S G I L DF L+
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 27/134 (20%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTT 356
KL + G I + + + S+ V T Y APE++ + VD W++G E+F
Sbjct: 160 KLADFGLARIYSFQMALTSV--VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP 217
Query: 357 PFKG---IDHELTLANVVARALE--FPKEPSVPGPA--------------------KDLI 391
F+G +D + +V+ E +P++ ++P A KDL+
Sbjct: 218 LFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLL 277
Query: 392 AQLLVKDPTRRMGS 405
+ L +P +R+ +
Sbjct: 278 LKCLTFNPAKRISA 291
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 14/157 (8%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAK---VMDKRELVSRNKESRARIEREILEML 143
V +G G G+VY K++ ++G F A K V + E + + + R LE
Sbjct: 9 VAEIGVGAYGTVY----KARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRR-LEAF 63
Query: 144 DHPFLPTLYATLDCPRWS-----CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
+HP + L R L+ E DL + P ++ + +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
L+FLH I++RDLKPEN+LV S G + L DF L+
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 24/164 (14%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ + + V ++G G G VY K+++ G A + + + + S A E +L
Sbjct: 2 MENFQKVEKIGEGTYGVVY----KARNKLTGEVVALXKI-RLDTETEGVPSTAIREISLL 56
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA---------VR 191
+ L+HP + L + L+ EF LH Q K+F +++ ++
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIK 106
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
Y +++ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 107 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 60/155 (38%), Gaps = 35/155 (22%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGT 355
KL + G P+ + V T Y APEI+ G + + AVD W+LG E+
Sbjct: 143 KLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
Query: 356 TPFKGIDHELTLANVVARALEFPKE-------------PSVPGPAKD------------- 389
F G D E+ + R L P E PS P A+
Sbjct: 202 ALFPG-DSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 260
Query: 390 --LIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVN 422
L++Q+L DP +R+ +K A H FF V
Sbjct: 261 RSLLSQMLHYDPNKRISAK----AALAHPFFQDVT 291
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 24/164 (14%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ + + V ++G G G VY K+++ G A + + + + S A E +L
Sbjct: 1 MENFQKVEKIGEGTYGVVY----KARNKLTGEVVALXKI-RLDTETEGVPSTAIREISLL 55
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA---------VR 191
+ L+HP + L + L+ EF LH Q K+F +++ ++
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEF-----LH-----QDLKKFMDASALTGIPLPLIK 105
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
Y +++ L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 106 SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 60/155 (38%), Gaps = 35/155 (22%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGT 355
KL + G P+ + V T Y APEI+ G + + AVD W+LG E+
Sbjct: 142 KLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 356 TPFKGIDHELTLANVVARALEFPKE-------------PSVPGPAKD------------- 389
F G D E+ + R L P E PS P A+
Sbjct: 201 ALFPG-DSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 259
Query: 390 --LIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVN 422
L++Q+L DP +R+ +K A H FF V
Sbjct: 260 RSLLSQMLHYDPNKRISAK----AALAHPFFQDVT 290
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 73/186 (39%), Gaps = 47/186 (25%)
Query: 190 VRFYASEVVVALEFLHMMGIIYRDLKPENVLV-RSDGHIMLTDFDLSLKGDNSTSTAQLV 248
VR Y + AL+ +H GI++RD+KP N L R L DF L+ +G + T L
Sbjct: 119 VREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLA-QGTHDTKIELLK 177
Query: 249 SDQSPPTGDQ-QPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIV 307
QS ++ N C++ CL +++ + G PG
Sbjct: 178 FVQSEAQQERCSQNKCSI---------------------CLSRRQQVAPRAGTPG----- 211
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELT 366
+ APE+++ A+D W+ G+ L G PF +LT
Sbjct: 212 ----------------FRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLT 255
Query: 367 -LANVV 371
LA ++
Sbjct: 256 ALAQIM 261
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 14/168 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
+D+ H+LG G G VY K S A K + + + A + +EI
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLT----VAVKTLKEDTMEVEEFLKEAAVMKEI-- 64
Query: 142 MLDHPFLPTLYATLDCPRW--SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
HP L L C R ++TEF G+L + + + + A+++
Sbjct: 65 --KHPNLVQLLGV--CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
A+E+L I+RDL N LV + + + DF LS + GD T+ A
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHA 168
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 117 KVMDKRELVSRNKESRARIEREILEMLD--HPFLPTLYATLDCPRWSCLLTEFCPGGDL- 173
KV KR + + + S + +EI M HP + + Y + L+ + GG +
Sbjct: 42 KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 101
Query: 174 ----HVL-RQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIM 228
H++ + ES + EV+ LE+LH G I+RD+K N+L+ DG +
Sbjct: 102 DIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQ 161
Query: 229 LTDFDLS 235
+ DF +S
Sbjct: 162 IADFGVS 168
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 117 KVMDKRELVSRNKESRARIEREILEMLD--HPFLPTLYATLDCPRWSCLLTEFCPGGDL- 173
KV KR + + + S + +EI M HP + + Y + L+ + GG +
Sbjct: 37 KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 96
Query: 174 ----HVL-RQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIM 228
H++ + ES + EV+ LE+LH G I+RD+K N+L+ DG +
Sbjct: 97 DIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQ 156
Query: 229 LTDFDLS 235
+ DF +S
Sbjct: 157 IADFGVS 163
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 71/174 (40%), Gaps = 5/174 (2%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
L+ + LG G G V L + + N G A K + N + + E EIL L
Sbjct: 11 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNL 68
Query: 144 DHPFLPTLYA--TLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
H + T D L+ EF P G L + +K + ++ YA ++ +
Sbjct: 69 YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLK-YAVQICKGM 127
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPT 255
++L ++RDL NVLV S+ + + DF L+ + + D+ P
Sbjct: 128 DYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV 181
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++LR V LGSG G+VY N A KV+ RE S E
Sbjct: 14 LKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVL--RENTSPKANKEILDEAY 71
Query: 139 ILEMLDHPFLPTLYATLDCPRWSC-LLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYAS 195
++ + P++ L C + L+T+ P G L HV R+ R + +
Sbjct: 72 VMAGVGSPYVSRLLGI--CLTSTVQLVTQLMPYGCLLDHV---RENRGRLGSQDLLNWCM 126
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
++ + +L + +++RDL NVLV+S H+ +TDF L+
Sbjct: 127 QIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLA 166
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
+D+ H+LG G G VY K S A K + + + A + +EI
Sbjct: 259 TDITMKHKLGGGQYGEVYEGVWKKYS----LTVAVKTLKEDTMEVEEFLKEAAVMKEI-- 312
Query: 142 MLDHPFLPTLYA--TLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
HP L L T + P + ++TEF G+L + + + + + A+++
Sbjct: 313 --KHPNLVQLLGVCTREPPFY--IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 368
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
A+E+L I+R+L N LV + + + DF LS + GD T+ A
Sbjct: 369 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 416
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 15/159 (9%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI-LE 141
DL + LG G G V K + +G A K + R V+ ++ R ++ +I +
Sbjct: 52 DLEPIMELGRGAYGVVE----KMRHVPSGQIMAVKRI--RATVNSQEQKRLLMDLDISMR 105
Query: 142 MLDHPFLPTLYATL--DCPRWSCLLTEFCPGGDLHVLRQRQPDK--RFHESAVRFYASEV 197
+D PF T Y L + W C+ E L ++ DK E + A +
Sbjct: 106 TVDCPFTVTFYGALFREGDVWICM--ELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSI 162
Query: 198 VVALEFLH-MMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
V ALE LH + +I+RD+KP NVL+ + G + + DF +S
Sbjct: 163 VKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS 201
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
+D+ H+LG G G VY K S A K + + + A + +EI
Sbjct: 217 TDITMKHKLGGGQYGEVYEGVWKKYS----LTVAVKTLKEDTMEVEEFLKEAAVMKEI-- 270
Query: 142 MLDHPFLPTLYATLDCPRWS--CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
HP L L C R ++TEF G+L + + + + + A+++
Sbjct: 271 --KHPNLVQLLGV--CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 326
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
A+E+L I+R+L N LV + + + DF LS + GD T+ A
Sbjct: 327 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 374
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 14/168 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
+D+ H+LG G G VY K S A K + + + A + +EI
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLT----VAVKTLKEDTMEVEEFLKEAAVMKEI-- 67
Query: 142 MLDHPFLPTLYATLDCPRW--SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
HP L L C R ++ EF G+L + + + + + A+++
Sbjct: 68 --KHPNLVQLLGV--CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
A+E+L I+RDL N LV + + + DF LS + GD T+ A
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 171
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
D + V +LG G V+ ++ + N K++ V +NK R E +ILE
Sbjct: 38 DYQLVRKLGRGKYSEVF----EAINITNNEKVVVKILKP---VKKNKIKR---EIKILEN 87
Query: 143 L-DHPFLPTLYATLDCP--RWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
L P + TL + P R L+ E D L Q D +RFY E++
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTD-----YDIRFYMYEILK 142
Query: 200 ALEFLHMMGIIYRDLKPENVLV 221
AL++ H MGI++RD+KP NV++
Sbjct: 143 ALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 170 GGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIML 229
G DL+ + + Q H V+F +++ L+++H GII+RDLKP NV V D + +
Sbjct: 116 GADLNNIVKSQALSDEH---VQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRI 172
Query: 230 TDFDLSLKGDNSTS 243
DF L+ + D +
Sbjct: 173 LDFGLARQADEEMT 186
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDHEL 365
+A D +V T Y APEI+ H N VD W++G + EL G F G D+
Sbjct: 177 LARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY-- 234
Query: 366 TLANVVARALEFPKEPS 382
+ + R +E PS
Sbjct: 235 --IDQLKRIMEVVGTPS 249
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 6/155 (3%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
+ + + V ++G G G VY K+++ G A K + + + + S A E +L
Sbjct: 1 MENFQKVEKIGEGTYGVVY----KARNKLTGEVVALKKI-RLDTETEGVPSTAIREISLL 55
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
+ L+HP + L + L+ E DL ++ Y +++
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
L F H +++RDLKP+N+L+ ++G I L DF L+
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 60/155 (38%), Gaps = 35/155 (22%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISG-EGHGNAVDWWTLGIFIFELFYGT 355
KL + G P+ + V T Y APEI+ G + + AVD W+LG E+
Sbjct: 142 KLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
Query: 356 TPFKGIDHELTLANVVARALEFPKE-------------PSVPGPAKD------------- 389
F G D E+ + R L P E PS P A+
Sbjct: 201 ALFPG-DSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDG 259
Query: 390 --LIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVN 422
L++Q+L DP +R+ +K A H FF V
Sbjct: 260 RSLLSQMLHYDPNKRISAK----AALAHPFFQDVT 290
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 13/151 (8%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ ++G G G V+ K + A K++D E ++ + I +L D P
Sbjct: 27 LEKIGKGSFGEVF----KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEIT--VLSQCDSP 80
Query: 147 FLPTLYATL--DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
++ Y + D W ++ E+ GG L + P E+ + E++ L++L
Sbjct: 81 YVTKYYGSYLKDTKLW--IIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYL 135
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
H I+RD+K NVL+ G + L DF ++
Sbjct: 136 HSEKKIHRDIKAANVLLSEHGEVKLADFGVA 166
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 12/118 (10%)
Query: 313 VRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVA 372
++ FVGT ++APE+I + + D W+LGI EL G P + H + + ++
Sbjct: 174 IKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL-HPMKVLFLIP 232
Query: 373 RALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVNWALLRCAK 430
+ E + P K+ + L K+P+ R +K + +H+F +LR AK
Sbjct: 233 KNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAK----ELLKHKF-------ILRNAK 279
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 14/168 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
+D+ H+LG G G VY K S A K + + + A + +EI
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLT----VAVKTLKEDTMEVEEFLKEAAVMKEI-- 71
Query: 142 MLDHPFLPTLYATLDCPRW--SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
HP L L C R ++ EF G+L + + + + + A+++
Sbjct: 72 --KHPNLVQLLGV--CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
A+E+L I+RDL N LV + + + DF LS + GD T+ A
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 175
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 12/154 (7%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
DL F+ LG+G G V + + + M + E + E +++
Sbjct: 25 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE---------EAKVMMN 75
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGG-DLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
L H L LY R ++TE+ G L+ LR+ + RF + +V A+
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAM 133
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+L ++RDL N LV G + ++DF LS
Sbjct: 134 EYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 12/154 (7%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
DL F+ LG+G G V + + + M + E + E +++
Sbjct: 25 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE---------EAKVMMN 75
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGG-DLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
L H L LY R ++TE+ G L+ LR+ + RF + +V A+
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAM 133
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+L ++RDL N LV G + ++DF LS
Sbjct: 134 EYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 13/151 (8%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ ++G G G V+ K + A K++D E ++ + I +L D P
Sbjct: 12 LEKIGKGSFGEVF----KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEIT--VLSQCDSP 65
Query: 147 FLPTLYATL--DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
++ Y + D W ++ E+ GG L + P E+ + E++ L++L
Sbjct: 66 YVTKYYGSYLKDTKLW--IIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYL 120
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
H I+RD+K NVL+ G + L DF ++
Sbjct: 121 HSEKKIHRDIKAANVLLSEHGEVKLADFGVA 151
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 12/118 (10%)
Query: 313 VRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVA 372
++ FVGT ++APE+I + + D W+LGI EL G P + H + + ++
Sbjct: 159 IKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL-HPMKVLFLIP 217
Query: 373 RALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVNWALLRCAK 430
+ E + P K+ + L K+P+ R +K + +H+F +LR AK
Sbjct: 218 KNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAK----ELLKHKF-------ILRNAK 264
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 13/151 (8%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ ++G G G V+ K + A K++D E ++ + I +L D P
Sbjct: 12 LEKIGKGSFGEVF----KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEIT--VLSQCDSP 65
Query: 147 FLPTLYATL--DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
++ Y + D W ++ E+ GG L + P E+ + E++ L++L
Sbjct: 66 YVTKYYGSYLKDTKLW--IIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYL 120
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
H I+RD+K NVL+ G + L DF ++
Sbjct: 121 HSEKKIHRDIKAANVLLSEHGEVKLADFGVA 151
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 313 VRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVA 372
++ +FVGT ++APE+I + + D W+LGI EL G P + H + + ++
Sbjct: 159 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL-HPMKVLFLIP 217
Query: 373 RALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVNWALLRCAK 430
+ E + P K+ + L K+P+ R +K + +H+F +LR AK
Sbjct: 218 KNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAK----ELLKHKF-------ILRNAK 264
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
+D+ H+LG G G VY K S A K + + + A + +EI
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYS----LTVAVKTLKEDTMEVEEFLKEAAVMKEI-- 273
Query: 142 MLDHPFLPTLYATLDCPRWS--CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFY-ASEVV 198
HP L L C R ++TEF G+L + R+ +++ + V Y A+++
Sbjct: 274 --KHPNLVQLLGV--CTREPPFYIITEFMTYGNL-LDYLRECNRQEVSAVVLLYMATQIS 328
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
A+E+L I+R+L N LV + + + DF LS + GD T+ A
Sbjct: 329 SAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 377
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 13/151 (8%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ ++G G G V+ K + A K++D E ++ + I +L D P
Sbjct: 32 LEKIGKGSFGEVF----KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEIT--VLSQCDSP 85
Query: 147 FLPTLYATL--DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
++ Y + D W ++ E+ GG L + P E+ + E++ L++L
Sbjct: 86 YVTKYYGSYLKDTKLW--IIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYL 140
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
H I+RD+K NVL+ G + L DF ++
Sbjct: 141 HSEKKIHRDIKAANVLLSEHGEVKLADFGVA 171
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 313 VRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVA 372
++ +FVGT ++APE+I + + D W+LGI EL G P + H + + ++
Sbjct: 179 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL-HPMKVLFLIP 237
Query: 373 RALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVNWALLRCAK 430
+ E + P K+ + L K+P+ R +K + +H+F +LR AK
Sbjct: 238 KNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAK----ELLKHKF-------ILRNAK 284
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 14/168 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
+D+ H+LG G G VY K S A K + + + A + +EI
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLT----VAVKTLKEDTMEVEEFLKEAAVMKEI-- 64
Query: 142 MLDHPFLPTLYATLDCPRW--SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
HP L L C R ++ EF G+L + + + + A+++
Sbjct: 65 --KHPNLVQLLGV--CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
A+E+L I+RDL N LV + + + DF LS + GD T+ A
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 168
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 15/159 (9%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI-LE 141
DL + LG G G V K + +G A K + R V+ ++ R ++ +I +
Sbjct: 8 DLEPIMELGRGAYGVVE----KMRHVPSGQIMAVKRI--RATVNSQEQKRLLMDLDISMR 61
Query: 142 MLDHPFLPTLYATL--DCPRWSCLLTEFCPGGDLHVLRQRQPDK--RFHESAVRFYASEV 197
+D PF T Y L + W C+ E L ++ DK E + A +
Sbjct: 62 TVDCPFTVTFYGALFREGDVWICM--ELMDTS-LDKFYKQVIDKGQTIPEDILGKIAVSI 118
Query: 198 VVALEFLH-MMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
V ALE LH + +I+RD+KP NVL+ + G + + DF +S
Sbjct: 119 VKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 82/208 (39%), Gaps = 63/208 (30%)
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPT 255
++ A+EFLH G+++RDLKP N+ D D+ GD TA
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMD--------DVVKVGDFGLVTAM--------- 214
Query: 256 GDQQPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRS 315
DQ + V P +PA + +
Sbjct: 215 -DQDEEEQTVLTP-------------MPAYATHXGQ------------------------ 236
Query: 316 MSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARAL 375
VGT Y++PE I G + + VD ++LG+ +FEL Y + ++ + +V R L
Sbjct: 237 ---VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFS--TQMERVRIITDV--RNL 289
Query: 376 EFPKEPSVPGPAKDLIAQ-LLVKDPTRR 402
+FP + P + ++ Q +L PT R
Sbjct: 290 KFPLLFTQKYPQEHMMVQDMLSPSPTER 317
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 132 RARIEREILEM--LDHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHES 188
R + +E L M DHP + L + + P W ++ E C G+L Q + +
Sbjct: 60 REKFLQEALTMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVR-KYSLDLA 116
Query: 189 AVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNST 242
++ YA ++ AL +L ++RD+ NVLV S+ + L DF LS ++ST
Sbjct: 117 SLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFE-LFYGT 355
KLG+ G + + ++ +++APE I+ +A D W G+ ++E L +G
Sbjct: 156 KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 215
Query: 356 TPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRR 402
PF+G+ + + + P P+ P L+ + DP+RR
Sbjct: 216 KPFQGVKNNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 261
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 132 RARIEREILEM--LDHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHES 188
R + +E L M DHP + L + + P W ++ E C G+L Q + +
Sbjct: 83 REKFLQEALTMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVR-KYSLDLA 139
Query: 189 AVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNST 242
++ YA ++ AL +L ++RD+ NVLV S+ + L DF LS ++ST
Sbjct: 140 SLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 193
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFE-LFYGTTPFKGIDHELTLANVVARALEFPKEP 381
+++APE I+ +A D W G+ ++E L +G PF+G+ + + + P P
Sbjct: 205 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR-IENGERLPMPP 263
Query: 382 SVPGPAKDLIAQLLVKDPTRR 402
+ P L+ + DP+RR
Sbjct: 264 NCPPTLYSLMTKCWAYDPSRR 284
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 132 RARIEREILEM--LDHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHES 188
R + +E L M DHP + L + + P W ++ E C G+L Q + +
Sbjct: 58 REKFLQEALTMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVR-KYSLDLA 114
Query: 189 AVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNST 242
++ YA ++ AL +L ++RD+ NVLV S+ + L DF LS ++ST
Sbjct: 115 SLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 168
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFE-LFYGT 355
KLG+ G + + ++ +++APE I+ +A D W G+ ++E L +G
Sbjct: 154 KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 213
Query: 356 TPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRR 402
PF+G+ + + + P P+ P L+ + DP+RR
Sbjct: 214 KPFQGVKNNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 259
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 132 RARIEREILEM--LDHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHES 188
R + +E L M DHP + L + + P W ++ E C G+L Q + +
Sbjct: 57 REKFLQEALTMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVR-KYSLDLA 113
Query: 189 AVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNST 242
++ YA ++ AL +L ++RD+ NVLV S+ + L DF LS ++ST
Sbjct: 114 SLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 167
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFE-LFYGT 355
KLG+ G + + ++ +++APE I+ +A D W G+ ++E L +G
Sbjct: 153 KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 212
Query: 356 TPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRR 402
PF+G+ + + + P P+ P L+ + DP+RR
Sbjct: 213 KPFQGVKNNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 258
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 83/208 (39%), Gaps = 14/208 (6%)
Query: 89 RLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFL 148
R+G G G VY K ++ A K++D E ++ + I +L D P++
Sbjct: 26 RIGKGSFGEVY----KGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEIT--VLSQCDSPYI 79
Query: 149 PTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMG 208
+ + ++ E+ GG L + P E+ + E++ L++LH
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP---LEETYIATILREILKGLDYLHSER 136
Query: 209 IIYRDLKPENVLVRSDGHIMLTDFDLSLK-GDNSTSTAQLVSD---QSPPTGDQQPNDCA 264
I+RD+K NVL+ G + L DF ++ + D V +P Q D
Sbjct: 137 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFK 196
Query: 265 VDQPPFGNSSCIIPNCIVPAVSCLHPKR 292
D G ++ + P S LHP R
Sbjct: 197 ADIWSLGITAIELAKG-EPPNSDLHPMR 223
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 5/107 (4%)
Query: 313 VRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVA 372
++ FVGT ++APE+I + D W+LGI EL G P + H + + ++
Sbjct: 171 IKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL-HPMRVLFLIP 229
Query: 373 RALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFN 419
+ E P K+ + L KDP R +K + +H+F
Sbjct: 230 KNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAK----ELLKHKFIT 272
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 70/145 (48%), Gaps = 11/145 (7%)
Query: 114 FAAKVMDKRELVSRNKESRARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL 173
+ AK + +++ S ++ +E L ++HP + LY C CL+ E+ GG L
Sbjct: 30 WRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGA--CLNPVCLVMEYAEGGSL 87
Query: 174 H-VLRQRQPDKRFHESAVRFYASEVVVALEFLHMM---GIIYRDLKPENVLVRSDGHIM- 228
+ VL +P + + + + + +LH M +I+RDLKP N+L+ + G ++
Sbjct: 88 YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLK 147
Query: 229 LTDF----DLSLKGDNSTSTAQLVS 249
+ DF D+ N+ +A ++
Sbjct: 148 ICDFGTACDIQTHMTNNKGSAAWMA 172
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 320 GTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH-ELTLANVVARALEFP 378
G+ ++APE+ G + D ++ GI ++E+ PF I + V P
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP 225
Query: 379 KEPSVPGPAKDLIAQLLVKDPTRR 402
++P P + L+ + KDP++R
Sbjct: 226 LIKNLPKPIESLMTRCWSKDPSQR 249
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 14/168 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
+D+ H+LG G G VY K S A K + + + A + +EI
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLT----VAVKTLKEDTMEVEEFLKEAAVMKEI-- 66
Query: 142 MLDHPFLPTLYATLDCPRW--SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
HP L L C R ++ EF G+L + + + + A+++
Sbjct: 67 --KHPNLVQLLGV--CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
A+E+L I+RDL N LV + + + DF LS + GD T+ A
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 190 VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
V+F +++ L+++H GII+RDLKP NV V D + + DF L+ + D +
Sbjct: 133 VQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT 186
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDHEL 365
+A D +V T Y APEI+ H N VD W++G + EL G F G D+
Sbjct: 177 LARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY-- 234
Query: 366 TLANVVARALEFPKEPS 382
+ + R +E PS
Sbjct: 235 --IDQLKRIMEVVGTPS 249
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 14/168 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
+D+ H+LG G G VY K S A K + + + A + +EI
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLT----VAVKTLKEDTMEVEEFLKEAAVMKEI-- 66
Query: 142 MLDHPFLPTLYATLDCPRW--SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
HP L L C R ++ EF G+L + + + + A+++
Sbjct: 67 --KHPNLVQLLGV--CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTA 245
A+E+L I+RDL N LV + + + DF LS + GD T+ A
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 132 RARIEREILEM--LDHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHES 188
R + +E L M DHP + L + + P W ++ E C G+L Q + +
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVR-KYSLDLA 111
Query: 189 AVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNST 242
++ YA ++ AL +L ++RD+ NVLV S+ + L DF LS ++ST
Sbjct: 112 SLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 165
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFE-LFYGT 355
KLG+ G + + ++ +++APE I+ +A D W G+ ++E L +G
Sbjct: 151 KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 210
Query: 356 TPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRR 402
PF+G+ + + + P P+ P L+ + DP+RR
Sbjct: 211 KPFQGVKNNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 256
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 132 RARIEREILEM--LDHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHES 188
R + +E L M DHP + L + + P W ++ E C G+L Q + +
Sbjct: 52 REKFLQEALTMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVR-KYSLDLA 108
Query: 189 AVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNST 242
++ YA ++ AL +L ++RD+ NVLV S+ + L DF LS ++ST
Sbjct: 109 SLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 162
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFE-LFYGT 355
KLG+ G + + ++ +++APE I+ +A D W G+ ++E L +G
Sbjct: 148 KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 207
Query: 356 TPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRR 402
PF+G+ + + + P P+ P L+ + DP+RR
Sbjct: 208 KPFQGVKNNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 253
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEFPKEP- 381
EY APE+ + A D W+LG ++ L G PF ++ + N++ F +E
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAF 227
Query: 382 -SVPGPAKDLIAQLLVKDPTRRMGS 405
+ A D + +LLVK+ RM +
Sbjct: 228 KEISIEAMDFVDRLLVKERKSRMTA 252
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 90 LGSGDIGSVY-LVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFL 148
LG G+ G V+ V+ SK + F K D+ LV + E IL + H +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQV-LVKK--------EISILNIARHRNI 63
Query: 149 PTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMG 208
L+ + + ++ EF G D+ R +E + Y +V AL+FLH
Sbjct: 64 LHLHESFESMEELVMIFEFISGLDI-FERINTSAFELNEREIVSYVHQVCEALQFLHSHN 122
Query: 209 IIYRDLKPENVL--VRSDGHIMLTDFDLSLK---GDN 240
I + D++PEN++ R I + +F + + GDN
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 12/154 (7%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
DL F+ LG+G G V + + + M + E + E +++
Sbjct: 16 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE---------EAKVMMN 66
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGG-DLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
L H L LY R ++TE+ G L+ LR+ + RF + +V A+
Sbjct: 67 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAM 124
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+L ++RDL N LV G + ++DF LS
Sbjct: 125 EYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 158
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 17/237 (7%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
L+F +G G +VY K + A + R+L ++++ R + E E L+ L
Sbjct: 28 LKFDIEIGRGSFKTVY----KGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEXLKGL 82
Query: 144 DHPFLPTLY----ATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
HP + Y +T+ + L+TE G L +R + +R + +++
Sbjct: 83 QHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKI--KVLRSWCRQILK 140
Query: 200 ALEFLHMMG--IIYRDLKPENVLVRS-DGHIMLTDFDLSLKGDNSTSTAQLVSDQ-SPPT 255
L+FLH II+RDLK +N+ + G + + D L+ S + A + + + P
Sbjct: 141 GLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPE 200
Query: 256 GDQQPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKR--RRKKKLGNPGTPEIVAEP 310
++ D +VD FG P C + + RR P + + VA P
Sbjct: 201 XYEEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIP 257
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 12/154 (7%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
DL F+ LG+G G V + + + M + E + E +++
Sbjct: 10 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE---------EAKVMMN 60
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGG-DLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
L H L LY R ++TE+ G L+ LR+ + RF + +V A+
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAM 118
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+L ++RDL N LV G + ++DF LS
Sbjct: 119 EYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 152
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 132 RARIEREILEM--LDHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHES 188
R + +E L M DHP + L + + P W ++ E C G+L Q + +
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVR-KYSLDLA 111
Query: 189 AVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNST 242
++ YA ++ AL +L ++RD+ NVLV S+ + L DF LS ++ST
Sbjct: 112 SLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 165
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFE-LFYGT 355
KLG+ G + + ++ +++APE I+ +A D W G+ ++E L +G
Sbjct: 151 KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 210
Query: 356 TPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRR 402
PF+G+ + + + P P+ P L+ + DP+RR
Sbjct: 211 KPFQGVKNNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 256
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
LG G +VY + + K++N + R A E ++L+ L HP +
Sbjct: 18 LGEGQFATVY--KARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 150 TLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGI 209
L L+ +F DL V+ + S ++ Y + LE+LH I
Sbjct: 76 GLLDAFGHKSNISLVFDFMET-DLEVI-IKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWI 133
Query: 210 IYRDLKPENVLVRSDGHIMLTDFDLS 235
++RDLKP N+L+ +G + L DF L+
Sbjct: 134 LHRDLKPNNLLLDENGVLKLADFGLA 159
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 9/149 (6%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ R+G G G V+ K + A K++D E ++ + I +L D
Sbjct: 28 LERIGKGSFGEVF----KGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEIT--VLSQCDSS 81
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
++ Y + ++ E+ GG L + P F E + E++ L++LH
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP---FDEFQIATMLKEILKGLDYLHS 138
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
I+RD+K NVL+ G + L DF ++
Sbjct: 139 EKKIHRDIKAANVLLSEQGDVKLADFGVA 167
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 313 VRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTP 357
++ +FVGT ++APE+I + + D W+LGI EL G P
Sbjct: 175 IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 12/154 (7%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
DL F+ LG+G G V + + + M + E + E +++
Sbjct: 9 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE---------EAKVMMN 59
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGG-DLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
L H L LY R ++TE+ G L+ LR+ + RF + +V A+
Sbjct: 60 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAM 117
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+L ++RDL N LV G + ++DF LS
Sbjct: 118 EYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 151
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 70/145 (48%), Gaps = 11/145 (7%)
Query: 114 FAAKVMDKRELVSRNKESRARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL 173
+ AK + +++ S ++ +E L ++HP + LY P CL+ E+ GG L
Sbjct: 29 WRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSL 86
Query: 174 H-VLRQRQPDKRFHESAVRFYASEVVVALEFLHMM---GIIYRDLKPENVLVRSDGHIM- 228
+ VL +P + + + + + +LH M +I+RDLKP N+L+ + G ++
Sbjct: 87 YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLK 146
Query: 229 LTDF----DLSLKGDNSTSTAQLVS 249
+ DF D+ N+ +A ++
Sbjct: 147 ICDFGTACDIQTHMTNNKGSAAWMA 171
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 320 GTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH-ELTLANVVARALEFP 378
G+ ++APE+ G + D ++ GI ++E+ PF I + V P
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP 224
Query: 379 KEPSVPGPAKDLIAQLLVKDPTRR 402
++P P + L+ + KDP++R
Sbjct: 225 LIKNLPKPIESLMTRCWSKDPSQR 248
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 317 SFVGTHEYLAPEIISG--EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARA 374
+F GT +Y+APEII G+G A D W+LG I E+ G PF + V
Sbjct: 182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMF 241
Query: 375 LEFPKEP-SVPGPAKDLIAQLLVKDPTRR 402
P+ P S+ AK I + DP +R
Sbjct: 242 KVHPEIPESMSAEAKAFILKCFEPDPDKR 270
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 13/150 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL--EMLDHPF 147
LG G G VY + +N A K E+ R+ + EI + L H
Sbjct: 30 LGKGTYGIVY----AGRDLSNQVRIAIK-----EIPERDSRYSQPLHEEIALHKHLKHKN 80
Query: 148 LPTLYATLDCPRWSCLLTEFCPGGDLH-VLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ + + + E PGG L +LR + + +E + FY +++ L++LH
Sbjct: 81 IVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 140
Query: 207 MGIIYRDLKPENVLVRS-DGHIMLTDFDLS 235
I++RD+K +NVL+ + G + ++DF S
Sbjct: 141 NQIVHRDIKGDNVLINTYSGVLKISDFGTS 170
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 132 RARIEREILEM--LDHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHES 188
R + +E L M DHP + L + + P W ++ E C G+L Q + +
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKFS-LDLA 111
Query: 189 AVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNST 242
++ YA ++ AL +L ++RD+ NVLV S+ + L DF LS ++ST
Sbjct: 112 SLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 165
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFE-LFYGT 355
KLG+ G + + ++ +++APE I+ +A D W G+ ++E L +G
Sbjct: 151 KLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 210
Query: 356 TPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRR 402
PF+G+ + + + P P+ P L+ + DP+RR
Sbjct: 211 KPFQGVKNNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRR 256
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 12/154 (7%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
DL F+ LG+G G V + + + M + E + E +++
Sbjct: 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE---------EAKVMMN 55
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGG-DLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
L H L LY R ++TE+ G L+ LR+ + RF + +V A+
Sbjct: 56 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAM 113
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+L ++RDL N LV G + ++DF LS
Sbjct: 114 EYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 147
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 12/154 (7%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
DL F+ LG+G G V + + + M + E + E +++
Sbjct: 10 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE---------EAKVMMN 60
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGG-DLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
L H L LY R ++TE+ G L+ LR+ + RF + +V A+
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAM 118
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
E+L ++RDL N LV G + ++DF LS
Sbjct: 119 EYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 152
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 28/166 (16%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
++DL + +GSG G V+ ++ + G A K M + S NKE RI
Sbjct: 24 INDLENLGEMGSGTCGQVWKMRFR----KTGHVIAVKQMRR----SGNKEENKRI----- 70
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQ------RQPDKRFH----ESAV 190
++D L + + DCP F D+ + + + KR E +
Sbjct: 71 -LMD---LDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERIL 126
Query: 191 RFYASEVVVALEFL-HMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+V AL +L G+I+RD+KP N+L+ G I L DF +S
Sbjct: 127 GKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGIS 172
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 13/94 (13%)
Query: 319 VGTHEYLAPEII-----SGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVAR 373
G Y+APE I + + D W+LGI + EL G P+K + V+ +
Sbjct: 185 AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF---EVLTK 241
Query: 374 ALE-----FPKEPSVPGPAKDLIAQLLVKDPTRR 402
L+ P G + + L KD +R
Sbjct: 242 VLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKR 275
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 132 RARIEREILEM--LDHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHES 188
R + +E L M DHP + L + + P W ++ E C G+L Q + +
Sbjct: 435 REKFLQEALTMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKFS-LDLA 491
Query: 189 AVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNST 242
++ YA ++ AL +L ++RD+ NVLV S+ + L DF LS ++ST
Sbjct: 492 SLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 545
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query: 279 NCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNA 338
N +V + C+ KLG+ G + + ++ +++APE I+ +A
Sbjct: 521 NVLVSSNDCV--------KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 572
Query: 339 VDWWTLGIFIFE-LFYGTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVK 397
D W G+ ++E L +G PF+G+ + + + P P+ P L+ +
Sbjct: 573 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAY 631
Query: 398 DPTRR 402
DP+RR
Sbjct: 632 DPSRR 636
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 77/186 (41%), Gaps = 24/186 (12%)
Query: 89 RLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFL 148
RLG G G V+ ++K K + F V R V R +E A L P +
Sbjct: 79 RLGRGSFGEVH--RMKDKQTG----FQCAVKKVRLEVFRVEELVA------CAGLSSPRI 126
Query: 149 PTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQ---PDKRFHESAVRFYASEVVVALEFLH 205
LY + W + E GG L L ++ P+ R +Y + + LE+LH
Sbjct: 127 VPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR-----ALYYLGQALEGLEYLH 181
Query: 206 MMGIIYRDLKPENVLVRSDG-HIMLTDFD--LSLKGDNSTSTAQLVSDQSPPTGDQQPND 262
I++ D+K +NVL+ SDG L DF L L+ D + L D P T +
Sbjct: 182 TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG-LGKSLLTGDYIPGTETHMAPE 240
Query: 263 CAVDQP 268
+ +P
Sbjct: 241 VVMGKP 246
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
DL ++G+G G+V+ ++ +G A K++ +++ + R E I++
Sbjct: 38 DLNIKEKIGAGSFGTVH------RAEWHGSDVAVKILMEQDFHAERVNEFLR-EVAIMKR 90
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLH-VLRQRQPDKRFHESAVRFYASEVVVAL 201
L HP + + P ++TE+ G L+ +L + ++ E A +V +
Sbjct: 91 LRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGM 150
Query: 202 EFLHMMG--IIYRDLKPENVLVRSDGHIMLTDFDLS 235
+LH I++RDLK N+LV + + DF LS
Sbjct: 151 NYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLS 186
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 320 GTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV--VARALEF 377
GT E++APE++ E D ++ G+ ++EL P+ ++ +A V + LE
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEI 260
Query: 378 PK 379
P+
Sbjct: 261 PR 262
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 13/150 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL--EMLDHPF 147
LG G G VY + +N A K E+ R+ + EI + L H
Sbjct: 16 LGKGTYGIVY----AGRDLSNQVRIAIK-----EIPERDSRYSQPLHEEIALHKHLKHKN 66
Query: 148 LPTLYATLDCPRWSCLLTEFCPGGDLH-VLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ + + + E PGG L +LR + + +E + FY +++ L++LH
Sbjct: 67 IVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 126
Query: 207 MGIIYRDLKPENVLVRS-DGHIMLTDFDLS 235
I++RD+K +NVL+ + G + ++DF S
Sbjct: 127 NQIVHRDIKGDNVLINTYSGVLKISDFGTS 156
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 317 SFVGTHEYLAPEIISG--EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARA 374
+F GT +Y+APEII G+G A D W+LG I E+ G PF + V
Sbjct: 168 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMF 227
Query: 375 LEFPKEP-SVPGPAKDLIAQLLVKDPTRR 402
P+ P S+ AK I + DP +R
Sbjct: 228 KVHPEIPESMSAEAKAFILKCFEPDPDKR 256
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 14/196 (7%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
DL ++G+G G+V+ ++ +G A K++ +++ + R E I++
Sbjct: 38 DLNIKEKIGAGSFGTVH------RAEWHGSDVAVKILMEQDFHAERVNEFLR-EVAIMKR 90
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLH-VLRQRQPDKRFHESAVRFYASEVVVAL 201
L HP + + P ++TE+ G L+ +L + ++ E A +V +
Sbjct: 91 LRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGM 150
Query: 202 EFLHMMG--IIYRDLKPENVLVRSDGHIMLTDFDLS-LKGD---NSTSTAQLVSDQSPPT 255
+LH I++R+LK N+LV + + DF LS LK +S S A +P
Sbjct: 151 NYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEV 210
Query: 256 GDQQPNDCAVDQPPFG 271
+P++ D FG
Sbjct: 211 LRDEPSNEKSDVYSFG 226
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 315 SMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV--VA 372
S S GT E++APE++ E D ++ G+ ++EL P+ ++ +A V
Sbjct: 196 SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC 255
Query: 373 RALEFPK 379
+ LE P+
Sbjct: 256 KRLEIPR 262
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMD-KRELVSRNKESRARIEREILE 141
D + LG+G+ G V VQ + +G A K++ + + RN+ R E ++L
Sbjct: 17 DFERISELGAGNGGVVTKVQHRP----SGLIMARKLIHLEIKPAIRNQIIR---ELQVLH 69
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL-HVLRQRQPDKRFHESAVRFYASEVVVA 200
+ P++ Y + E GG L VL++ KR E + + V+
Sbjct: 70 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEA---KRIPEEILGKVSIAVLRG 126
Query: 201 LEFL-HMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
L +L I++RD+KP N+LV S G I L DF +S
Sbjct: 127 LAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVS 162
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 306 IVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPF 358
+ + +D + SFVGT Y+APE + G + D W++G+ + EL G P
Sbjct: 161 VSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMD-KRELVSRNKESRARIEREILE 141
D + LG+G+ G V+ V K +G A K++ + + RN+ R E ++L
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKP----SGLVMARKLIHLEIKPAIRNQIIR---ELQVLH 121
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL-HVLRQRQPDKRFHESAVRFYASEVVVA 200
+ P++ Y + E GG L VL++ R E + + V+
Sbjct: 122 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKG 178
Query: 201 LEFL-HMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
L +L I++RD+KP N+LV S G I L DF +S
Sbjct: 179 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 214
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 306 IVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPF 358
+ + +D + SFVGT Y++PE + G + D W++G+ + E+ G P
Sbjct: 213 VSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 16/160 (10%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKV-MDKRELVSRNKESRARIEREILEMLDHPFL 148
LG G+ GSV QLK + +G F V M K ++++ + E ++ DHP +
Sbjct: 31 LGKGEFGSVREAQLKQE---DGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHV 87
Query: 149 PTLYATLDCPRWS------CLLTEFCPGGDLH--VLRQRQPDKRFH---ESAVRFYASEV 197
L R ++ F GDLH +L R + F+ ++ VRF ++
Sbjct: 88 AKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV-DI 146
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLK 237
+E+L I+RDL N ++ D + + DF LS K
Sbjct: 147 ACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRK 186
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ ++G G G V L Q +N ++A KV+ + +R+ + A I ++I +
Sbjct: 40 IRKMGDGTFGRVLLCQ----HIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINN 95
Query: 147 FLPTLY-ATLDCPRWSCLLTEFCPGG-DLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
Y CL+ E P G L+ + R FH ++ Y E++ AL +L
Sbjct: 96 NNIVKYHGKFMYYDHMCLIFE--PLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYL 153
Query: 205 HMMGIIYRDLKPENVLV 221
M + + DLKPEN+L+
Sbjct: 154 RKMSLTHTDLKPENILL 170
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 162 CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV 221
L+ E D LRQ D +RFY E++ AL++ H MGI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLRQTLTD-----YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 190 VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
V+F +++ L+++H GII+RDLKP NV V D + + DF L+ + D +
Sbjct: 125 VQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMT 178
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDHEL 365
+A D +V T Y APEI+ H N VD W++G + EL G F G D+
Sbjct: 169 LARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY-- 226
Query: 366 TLANVVARALEFPKEPS 382
+ + R +E PS
Sbjct: 227 --IDQLKRIMEVVGTPS 241
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 30/134 (22%)
Query: 272 NSSCIIP----NCIVPAV----SCLHPKRR----------------RKKKLGNPGTPEIV 307
N +C IP CI+ +V S +H ++ + KL + G E +
Sbjct: 143 NYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYM 202
Query: 308 AEPLDVRSMSFVGTHEYLAPEIISGEG--HGNAVDWWTLGIFIFELFYGTTPFK-GIDHE 364
+D + GT+E++ PE S E +G VD W+LGI ++ +FY PF I
Sbjct: 203 ---VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV 259
Query: 365 LTLANVVARALEFP 378
N+ + +E+P
Sbjct: 260 ELFNNIRTKNIEYP 273
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 39/207 (18%), Positives = 80/207 (38%), Gaps = 37/207 (17%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
++D R + L G + L + +K F+A K +K L + +++ ++ +
Sbjct: 30 INDYRIIRTLNQGKFNKIILCEKDNK------FYALKKYEKSLLEKKRDFTKSNNDKISI 83
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTE--FCPGGDLHVLRQRQPDK---RFHE-------- 187
+ F L D CL E +++++ + + +F E
Sbjct: 84 KSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN 143
Query: 188 -------SAVRFYASEVVVALEFLHM-MGIIYRDLKPENVLVRSDGHIMLTDF------- 232
++ V+ + ++H I +RD+KP N+L+ +G + L+DF
Sbjct: 144 YTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMV 203
Query: 233 DLSLKGDNSTSTA---QLVSDQSPPTG 256
D +KG T + S++S G
Sbjct: 204 DKKIKGSRGTYEFMPPEFFSNESSYNG 230
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 40/127 (31%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVAR---- 373
+V T Y APE+I G G+ VD W++G + EL G+ F+G DH V+ +
Sbjct: 183 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTP 242
Query: 374 ALEF------------PKEPSVPG------------------------PAKDLIAQLLVK 397
+ EF P+ PG A+DL++++LV
Sbjct: 243 SAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVI 302
Query: 398 DPTRRMG 404
DP +R+
Sbjct: 303 DPDKRIS 309
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 128 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 171
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 19/172 (11%)
Query: 80 TLSDLRFVHR----LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARI 135
T ++R V+R +GSG G+V + G A K + R S RA
Sbjct: 19 TAWEVRAVYRDLQPVGSGAYGAV----CSAVDGRTGAKVAIKKL-YRPFQSELFAKRAYR 73
Query: 136 EREILEMLDHPFLPTLY------ATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA 189
E +L+ + H + L TLD L+ F G DL L + + + E
Sbjct: 74 ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHE---KLGEDR 129
Query: 190 VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNS 241
++F +++ L ++H GII+RDLKP N+ V D + + DF L+ + D+
Sbjct: 130 IQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE 181
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEII-SGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHEL 365
+A D V T Y APE+I + + VD W++G + E+ G T FKG DH
Sbjct: 174 LARQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD 233
Query: 366 TLANVV 371
L ++
Sbjct: 234 QLKEIM 239
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 23/154 (14%)
Query: 85 RFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLD 144
RF ++G G G+VY + G A + M+ ++ + + I EIL M +
Sbjct: 24 RF-EKIGQGASGTVY----TAMDVATGQEVAIRQMNLQQ-----QPKKELIINEILVMRE 73
Query: 145 HPFLPTLYATLDC-----PRWSCLLTEFCPGGDL-HVLRQRQPDKRFHESAVRFYASEVV 198
+ P + LD W ++ E+ GG L V+ + D E + E +
Sbjct: 74 NKN-PNIVNYLDSYLVGDELW--VVMEYLAGGSLTDVVTETCMD----EGQIAAVCRECL 126
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDF 232
ALEFLH +I+RD+K +N+L+ DG + LTDF
Sbjct: 127 QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDF 160
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 15/141 (10%)
Query: 310 PLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLAN 369
P + + VGT ++APE+++ + +G VD W+LGI E+ G P+ + L
Sbjct: 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 370 VVARAL-EFPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVNWALLRC 428
+ E + +D + + L D +R GS A + +HQF L+
Sbjct: 228 IATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR-GS---AKELLQHQF--------LKI 275
Query: 429 AKP--PFIPRPVTCRDLTTTN 447
AKP P ++ T N
Sbjct: 276 AKPLSSLTPLIAAAKEATKNN 296
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 23/154 (14%)
Query: 85 RFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLD 144
RF ++G G G+VY + G A + M+ ++ + + I EIL M +
Sbjct: 24 RF-EKIGQGASGTVY----TAMDVATGQEVAIRQMNLQQ-----QPKKELIINEILVMRE 73
Query: 145 HPFLPTLYATLDC-----PRWSCLLTEFCPGGDL-HVLRQRQPDKRFHESAVRFYASEVV 198
+ P + LD W ++ E+ GG L V+ + D E + E +
Sbjct: 74 NKN-PNIVNYLDSYLVGDELW--VVMEYLAGGSLTDVVTETCMD----EGQIAAVCRECL 126
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDF 232
ALEFLH +I+RD+K +N+L+ DG + LTDF
Sbjct: 127 QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDF 160
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 15/141 (10%)
Query: 310 PLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLAN 369
P + VGT ++APE+++ + +G VD W+LGI E+ G P+ + L
Sbjct: 168 PEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 370 VVARAL-EFPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVNWALLRC 428
+ E + +D + + L D +R GS A + +HQF L+
Sbjct: 228 IATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR-GS---AKELLQHQF--------LKI 275
Query: 429 AKP--PFIPRPVTCRDLTTTN 447
AKP P ++ T N
Sbjct: 276 AKPLSSLTPLIAAAKEATKNN 296
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 23/154 (14%)
Query: 85 RFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLD 144
RF ++G G G+VY + G A + M+ ++ + + I EIL M +
Sbjct: 24 RF-EKIGQGASGTVY----TAMDVATGQEVAIRQMNLQQ-----QPKKELIINEILVMRE 73
Query: 145 HPFLPTLYATLDC-----PRWSCLLTEFCPGGDL-HVLRQRQPDKRFHESAVRFYASEVV 198
+ P + LD W ++ E+ GG L V+ + D E + E +
Sbjct: 74 NKN-PNIVNYLDSYLVGDELW--VVMEYLAGGSLTDVVTETCMD----EGQIAAVCRECL 126
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDF 232
ALEFLH +I+RD+K +N+L+ DG + LTDF
Sbjct: 127 QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDF 160
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 15/141 (10%)
Query: 310 PLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLAN 369
P + VGT ++APE+++ + +G VD W+LGI E+ G P+ + L
Sbjct: 168 PEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 370 VVARAL-EFPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVNWALLRC 428
+ E + +D + + L D +R GS A + +HQF L+
Sbjct: 228 IATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR-GS---AKELLQHQF--------LKI 275
Query: 429 AKP--PFIPRPVTCRDLTTTN 447
AKP P ++ T N
Sbjct: 276 AKPLSSLTPLIAAAKEATKNN 296
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 19/172 (11%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L +D++F +G G+ G V LK++ +G A + +E S++ E E
Sbjct: 12 LDWNDIKFQDVIGEGNFGQV----LKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELE 67
Query: 139 IL-EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL-HVLRQR---QPDKRF-------- 185
+L ++ HP + L + + L E+ P G+L LR+ + D F
Sbjct: 68 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 127
Query: 186 --HESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +A++V +++L I+RDL N+LV + + DF LS
Sbjct: 128 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 179
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 23/154 (14%)
Query: 85 RFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLD 144
RF ++G G G+VY + G A + M+ ++ + + I EIL M +
Sbjct: 25 RF-EKIGQGASGTVY----TAMDVATGQEVAIRQMNLQQ-----QPKKELIINEILVMRE 74
Query: 145 HPFLPTLYATLDC-----PRWSCLLTEFCPGGDL-HVLRQRQPDKRFHESAVRFYASEVV 198
+ P + LD W ++ E+ GG L V+ + D E + E +
Sbjct: 75 NKN-PNIVNYLDSYLVGDELW--VVMEYLAGGSLTDVVTETCMD----EGQIAAVCRECL 127
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDF 232
ALEFLH +I+RD+K +N+L+ DG + LTDF
Sbjct: 128 QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDF 161
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 15/141 (10%)
Query: 310 PLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLAN 369
P + VGT ++APE+++ + +G VD W+LGI E+ G P+ + L
Sbjct: 169 PEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 228
Query: 370 VVARAL-EFPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVNWALLRC 428
+ E + +D + + L D +R GS A + +HQF L+
Sbjct: 229 IATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR-GS---AKELIQHQF--------LKI 276
Query: 429 AKP--PFIPRPVTCRDLTTTN 447
AKP P ++ T N
Sbjct: 277 AKPLSSLTPLIAAAKEATKNN 297
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 19/172 (11%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L +D++F +G G+ G V LK++ +G A + +E S++ E E
Sbjct: 22 LDWNDIKFQDVIGEGNFGQV----LKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELE 77
Query: 139 IL-EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL-HVLRQR---QPDKRF-------- 185
+L ++ HP + L + + L E+ P G+L LR+ + D F
Sbjct: 78 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 137
Query: 186 --HESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +A++V +++L I+RDL N+LV + + DF LS
Sbjct: 138 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 189
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 83/208 (39%), Gaps = 22/208 (10%)
Query: 56 DDPCWKAIKEATSEGXXXXXXX------PLTLSDLRFVHRLGSGDIGSVYLVQLKSKSSN 109
D C + IK EG L + +L+ + +G G+ G V L +
Sbjct: 161 DGLCTRLIKPKVMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVA 220
Query: 110 NGCFFAAKVMDKRELVSRNKESRARI-EREILEMLDHPFLPTLYATLDCPRWSC-LLTEF 167
C + + ++A + E ++ L H L L + + ++TE+
Sbjct: 221 VKC------------IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268
Query: 168 CPGGDL-HVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGH 226
G L LR R + ++F + +V A+E+L ++RDL NVLV D
Sbjct: 269 MAKGSLVDYLRSRGRSVLGGDCLLKF-SLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV 327
Query: 227 IMLTDFDLSLKGDNSTSTAQLVSDQSPP 254
++DF L+ + ++ T +L + P
Sbjct: 328 AKVSDFGLTKEASSTQDTGKLPVKWTAP 355
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 162 CLLT--EFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENV 219
CLL E GG+L Q + D+ F E ++ A++FLH I +RD+KPEN+
Sbjct: 100 CLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENL 159
Query: 220 LVRS---DGHIMLTDFDLS 235
L S D + LTDF +
Sbjct: 160 LYTSKEKDAVLKLTDFGFA 178
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFK---------GIDHELTLANVVARA 374
Y+APE++ E + + D W+LG+ ++ L G PF G+ + L
Sbjct: 195 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQY---G 251
Query: 375 LEFPKEPSVPGPAKDLIAQLLVKDPTRRM 403
P+ V AK LI LL DPT R+
Sbjct: 252 FPNPEWSEVSEDAKQLIRLLLKTDPTERL 280
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 77/186 (41%), Gaps = 24/186 (12%)
Query: 89 RLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFL 148
R+G G G V+ ++K K + F V R V R +E A L P +
Sbjct: 65 RVGRGSFGEVH--RMKDKQTG----FQCAVKKVRLEVFRVEELVA------CAGLSSPRI 112
Query: 149 PTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQ---PDKRFHESAVRFYASEVVVALEFLH 205
LY + W + E GG L L ++ P+ R +Y + + LE+LH
Sbjct: 113 VPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR-----ALYYLGQALEGLEYLH 167
Query: 206 MMGIIYRDLKPENVLVRSDG-HIMLTDFD--LSLKGDNSTSTAQLVSDQSPPTGDQQPND 262
I++ D+K +NVL+ SDG L DF L L+ D + L D P T +
Sbjct: 168 TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG-LGKSLLTGDYIPGTETHMAPE 226
Query: 263 CAVDQP 268
+ +P
Sbjct: 227 VVMGKP 232
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 162 CLLT--EFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENV 219
CLL E GG+L Q + D+ F E ++ A++FLH I +RD+KPEN+
Sbjct: 81 CLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENL 140
Query: 220 LVRS---DGHIMLTDFDLS 235
L S D + LTDF +
Sbjct: 141 LYTSKEKDAVLKLTDFGFA 159
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFK---------GIDHELTLANVVARA 374
Y+APE++ E + + D W+LG+ ++ L G PF G+ + L
Sbjct: 176 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQY---G 232
Query: 375 LEFPKEPSVPGPAKDLIAQLLVKDPTRRM 403
P+ V AK LI LL DPT R+
Sbjct: 233 FPNPEWSEVSEDAKQLIRLLLKTDPTERL 261
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 10/154 (6%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
S+L FV +GSG G V+L +K M + + + E E++
Sbjct: 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---------EAEVMM 58
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
L HP L LY CL+TEF G L + Q F + +V +
Sbjct: 59 KLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGM 117
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+L +I+RDL N LV + I ++DF ++
Sbjct: 118 AYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT 151
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 77/186 (41%), Gaps = 24/186 (12%)
Query: 89 RLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFL 148
R+G G G V+ ++K K + F V R V R +E A L P +
Sbjct: 81 RVGRGSFGEVH--RMKDKQTG----FQCAVKKVRLEVFRVEELVA------CAGLSSPRI 128
Query: 149 PTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQ---PDKRFHESAVRFYASEVVVALEFLH 205
LY + W + E GG L L ++ P+ R +Y + + LE+LH
Sbjct: 129 VPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR-----ALYYLGQALEGLEYLH 183
Query: 206 MMGIIYRDLKPENVLVRSDG-HIMLTDFD--LSLKGDNSTSTAQLVSDQSPPTGDQQPND 262
I++ D+K +NVL+ SDG L DF L L+ D + L D P T +
Sbjct: 184 TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG-LGKSLLTGDYIPGTETHMAPE 242
Query: 263 CAVDQP 268
+ +P
Sbjct: 243 VVMGKP 248
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 40/127 (31%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVAR---- 373
+V T Y APE+I G G+ VD W++G + EL G F+G DH V+ +
Sbjct: 185 YVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTP 244
Query: 374 ALEF---------------PKEPSVP---------------------GPAKDLIAQLLVK 397
+ EF PK P + A+DL++++LV
Sbjct: 245 SAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVI 304
Query: 398 DPTRRMG 404
DP +R+
Sbjct: 305 DPDKRIS 311
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 11/155 (7%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMD-KRELVSRNKESRARIEREILE 141
D + LG+G+ G V+ V K +G A K++ + + RN+ R E ++L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKP----SGLVMARKLIHLEIKPAIRNQIIR---ELQVLH 59
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
+ P++ Y + E GG L + ++ R E + + V+ L
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGL 117
Query: 202 EFL-HMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+L I++RD+KP N+LV S G I L DF +S
Sbjct: 118 TYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 306 IVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPF 358
+ + +D + SFVGT Y++PE + G + D W++G+ + E+ G P
Sbjct: 151 VSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 28/143 (19%)
Query: 111 GCFFAAKVMDKRELVSRNK----------ESRARIEREILEMLDHPFLPTLYATLDCPRW 160
G F AK + E+V+ + S A E +L+ L H + L+ L +
Sbjct: 16 GTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK 75
Query: 161 SCLLTEFCPGGDLHVLRQRQPDKRFHESA--------VRFYASEVVVALEFLHMMGIIYR 212
L+ EFC Q K++ +S V+ + +++ L F H +++R
Sbjct: 76 LTLVFEFCD----------QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHR 125
Query: 213 DLKPENVLVRSDGHIMLTDFDLS 235
DLKP+N+L+ +G + L DF L+
Sbjct: 126 DLKPQNLLINRNGELKLADFGLA 148
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 17/155 (10%)
Query: 86 FVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDH 145
F+ +LG G V LV+ ++G F+A K + E R + R E ++ + +H
Sbjct: 33 FIQKLGEGGFSYVDLVE----GLHDGHFYALKRILCHEQQDREEAQR---EADMHRLFNH 85
Query: 146 PFLPTLYATLDCPRW------SCLLTEFCPGGDLHVLRQRQPDKR--FHESAVRFYASEV 197
P + L A C R + LL F G L +R DK E + + +
Sbjct: 86 PNILRLVAY--CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGI 143
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDF 232
LE +H G +RDLKP N+L+ +G +L D
Sbjct: 144 CRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDL 178
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 321 THEYLAPEIISGEGH---GNAVDWWTLGIFIFELFYGTTPFKGIDHEL-TLANVVARALE 376
T Y APE+ S + H D W+LG ++ + +G P+ + + ++A V L
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLS 265
Query: 377 FPKEPSVPGPAKDLIAQLLVKDPTRR 402
P+ P L+ ++ DP +R
Sbjct: 266 IPQSPRHSSALWQLLNSMMTVDPHQR 291
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 11/155 (7%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMD-KRELVSRNKESRARIEREILE 141
D + LG+G+ G V+ V K +G A K++ + + RN+ R E ++L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKP----SGLVMARKLIHLEIKPAIRNQIIR---ELQVLH 59
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
+ P++ Y + E GG L + ++ R E + + V+ L
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGL 117
Query: 202 EFL-HMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+L I++RD+KP N+LV S G I L DF +S
Sbjct: 118 TYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 306 IVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPF 358
+ + +D + SFVGT Y++PE + G + D W++G+ + E+ G P
Sbjct: 151 VSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 4/165 (2%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
+ +S ++ +G+G+ G V LK F A K + + ++ + E
Sbjct: 30 IDISCVKIEQVIGAGEFGEVCSGHLKLPGKRE-IFVAIKTLKSGYTEKQRRDFLS--EAS 86
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
I+ DHP + L + ++TEF G L RQ D +F + +
Sbjct: 87 IMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL-RQNDGQFTVIQLVGMLRGIA 145
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
+++L M ++RDL N+LV S+ ++DF LS ++ TS
Sbjct: 146 AGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 190
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGIDHELTLANVVARALEFPKEPS 382
+ APE I +A D W+ GI ++E+ YG P+ + ++ + N + + P
Sbjct: 206 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ-DVINAIEQDYRLPPPMD 264
Query: 383 VPGPAKDLIAQLLVKDPTRR 402
P L+ KD R
Sbjct: 265 CPSALHQLMLDCWQKDRNHR 284
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 11/155 (7%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMD-KRELVSRNKESRARIEREILE 141
D + LG+G+ G V+ V K +G A K++ + + RN+ R E ++L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKP----SGLVMARKLIHLEIKPAIRNQIIR---ELQVLH 59
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
+ P++ Y + E GG L + ++ R E + + V+ L
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGL 117
Query: 202 EFL-HMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+L I++RD+KP N+LV S G I L DF +S
Sbjct: 118 TYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 306 IVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPF 358
+ + +D + SFVGT Y++PE + G + D W++G+ + E+ G P
Sbjct: 151 VSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLA-----NVVARALEF- 377
Y+APE++ E + + D W+LG+ ++ L G PF +H L ++ + EF
Sbjct: 235 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 293
Query: 378 -PKEPSVPGPAKDLIAQLLVKDPTRRM 403
P+ V K LI LL +PT+RM
Sbjct: 294 NPEWSEVSEEVKMLIRNLLKTEPTQRM 320
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 14/151 (9%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER--EILEMLDHPF 147
LG G G V +Q+ +K + FA K++ R E R + I+ ++D
Sbjct: 76 LGLGINGKV--LQIFNKRTQEK--FALKMLQDCPKARREVELHWRASQCPHIVRIVD--V 129
Query: 148 LPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMM 207
LYA C ++ E GG+L Q + D+ F E + A+++LH +
Sbjct: 130 YENLYAGRKC---LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 186
Query: 208 GIIYRDLKPENVLV---RSDGHIMLTDFDLS 235
I +RD+KPEN+L R + + LTDF +
Sbjct: 187 NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 217
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 78 PLTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER 137
P D ++ +G+G G ++ KS +G K +D + K+ E
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKS----DGKILVWKELDYGSMTEAEKQMLVS-EV 56
Query: 138 EILEMLDHPFLPTLY-ATLDCPRWSC-LLTEFCPGGDLHVLRQRQPDKR--FHESAVRFY 193
+L L HP + Y +D + ++ E+C GGDL + + +R E V
Sbjct: 57 NLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV 116
Query: 194 ASEVVVALEFLHMMG-----IIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
+++ +AL+ H +++RDLKP NV + ++ L DF L+ ++ TS A+
Sbjct: 117 MTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK 174
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTT 356
KLG+ G I+ + +FVGT Y++PE ++ + D W+LG ++EL
Sbjct: 156 KLGDFGLARILNHDTSF-AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMP 214
Query: 357 PFKGIDHE 364
PF +
Sbjct: 215 PFTAFSQK 222
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 78 PLTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER 137
P D ++ +G+G G ++ KS +G K +D + K+ E
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKS----DGKILVWKELDYGSMTEAEKQMLVS-EV 56
Query: 138 EILEMLDHPFLPTLY-ATLDCPRWSC-LLTEFCPGGDLHVLRQRQPDKR--FHESAVRFY 193
+L L HP + Y +D + ++ E+C GGDL + + +R E V
Sbjct: 57 NLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV 116
Query: 194 ASEVVVALEFLHMMG-----IIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
+++ +AL+ H +++RDLKP NV + ++ L DF L+ ++ TS A+
Sbjct: 117 MTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK 174
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTT 356
KLG+ G I+ + +FVGT Y++PE ++ + D W+LG ++EL
Sbjct: 156 KLGDFGLARILNHDTSF-AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMP 214
Query: 357 PFKGIDHE 364
PF +
Sbjct: 215 PFTAFSQK 222
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLA-----NVVARALEF- 377
Y+APE++ E + + D W+LG+ ++ L G PF +H L ++ + EF
Sbjct: 229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 287
Query: 378 -PKEPSVPGPAKDLIAQLLVKDPTRRM 403
P+ V K LI LL +PT+RM
Sbjct: 288 NPEWSEVSEEVKMLIRNLLKTEPTQRM 314
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 14/151 (9%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER--EILEMLDHPF 147
LG G G V +Q+ +K + FA K++ R E R + I+ ++D
Sbjct: 70 LGLGINGKV--LQIFNKRTQEK--FALKMLQDCPKARREVELHWRASQCPHIVRIVD--V 123
Query: 148 LPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMM 207
LYA C ++ E GG+L Q + D+ F E + A+++LH +
Sbjct: 124 YENLYAGRKC---LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 180
Query: 208 GIIYRDLKPENVLV---RSDGHIMLTDFDLS 235
I +RD+KPEN+L R + + LTDF +
Sbjct: 181 NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 132 RARIEREILEM--LDHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHES 188
R + +E L M DHP + L + + P W ++ E C G+L Q + +
Sbjct: 435 REKFLQEALTMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKFS-LDLA 491
Query: 189 AVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNST 242
++ YA ++ AL +L ++RD+ NVLV + + L DF LS ++ST
Sbjct: 492 SLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDST 545
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query: 279 NCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNA 338
N +V A C+ KLG+ G + + ++ +++APE I+ +A
Sbjct: 521 NVLVSATDCV--------KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 572
Query: 339 VDWWTLGIFIFE-LFYGTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVK 397
D W G+ ++E L +G PF+G+ + + + P P+ P L+ +
Sbjct: 573 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAY 631
Query: 398 DPTRR 402
DP+RR
Sbjct: 632 DPSRR 636
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 7/154 (4%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
DLR + +LG G G V + + S A K + K +++S+ E+ RE+ M
Sbjct: 13 DLRLLEKLGDGSFGVVRRGEWDAPSGKT-VSVAVKCL-KPDVLSQ-PEAMDDFIREVNAM 69
Query: 143 --LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
LDH L LY + P ++TE P G L + R R+ F + YA +V
Sbjct: 70 HSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSL-LDRLRKHQGHFLLGTLSRYAVQVAEG 127
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDL 234
+ +L I+RDL N+L+ + + + DF L
Sbjct: 128 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGIDHELTLANVVARALEFPKEPS 382
+ APE + +A D W G+ ++E+F YG P+ G++ L + P+
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 243
Query: 383 VPGPAKDLIAQLLVKDPTRR 402
P +++ Q P R
Sbjct: 244 CPQDIYNVMVQCWAHKPEDR 263
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 132 RARIEREILEM--LDHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHES 188
R + +E L M DHP + L + + P W ++ E C G+L Q + +
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITENPVW--IIMELCTLGELRSFLQVRKFS-LDLA 111
Query: 189 AVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNST 242
++ YA ++ AL +L ++RD+ NVLV + + L DF LS ++ST
Sbjct: 112 SLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDST 165
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query: 279 NCIVPAVSCLHPKRRRKKKLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNA 338
N +V A C+ KLG+ G + + ++ +++APE I+ +A
Sbjct: 141 NVLVSATDCV--------KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 192
Query: 339 VDWWTLGIFIFE-LFYGTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVK 397
D W G+ ++E L +G PF+G+ + + + P P+ P L+ +
Sbjct: 193 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAY 251
Query: 398 DPTRR 402
DP+RR
Sbjct: 252 DPSRR 256
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 7/154 (4%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
DLR + +LG G G V + + S A K + K +++S+ E+ RE+ M
Sbjct: 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKT-VSVAVKCL-KPDVLSQ-PEAMDDFIREVNAM 75
Query: 143 --LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
LDH L LY + P ++TE P G L + R R+ F + YA +V
Sbjct: 76 HSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSL-LDRLRKHQGHFLLGTLSRYAVQVAEG 133
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDL 234
+ +L I+RDL N+L+ + + + DF L
Sbjct: 134 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGIDHELTLANVVARALEFPKEPS 382
+ APE + +A D W G+ ++E+F YG P+ G++ L + P+
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 249
Query: 383 VPGPAKDLIAQLLVKDPTRR 402
P +++ Q P R
Sbjct: 250 CPQDIYNVMVQCWAHKPEDR 269
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLA-----NVVARALEF- 377
Y+APE++ E + + D W+LG+ ++ L G PF +H L ++ + EF
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 241
Query: 378 -PKEPSVPGPAKDLIAQLLVKDPTRRM 403
P+ V K LI LL +PT+RM
Sbjct: 242 NPEWSEVSEEVKMLIRNLLKTEPTQRM 268
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 14/151 (9%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER--EILEMLDHPF 147
LG G G V +Q+ +K + FA K++ R E R + I+ ++D
Sbjct: 24 LGLGINGKV--LQIFNKRTQEK--FALKMLQDCPKARREVELHWRASQCPHIVRIVD--V 77
Query: 148 LPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMM 207
LYA C ++ E GG+L Q + D+ F E + A+++LH +
Sbjct: 78 YENLYAGRKC---LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 134
Query: 208 GIIYRDLKPENVLV---RSDGHIMLTDFDLS 235
I +RD+KPEN+L R + + LTDF +
Sbjct: 135 NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 165
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLA-----NVVARALEF- 377
Y+APE++ E + + D W+LG+ ++ L G PF +H L ++ + EF
Sbjct: 184 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 242
Query: 378 -PKEPSVPGPAKDLIAQLLVKDPTRRM 403
P+ V K LI LL +PT+RM
Sbjct: 243 NPEWSEVSEEVKMLIRNLLKTEPTQRM 269
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 14/151 (9%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER--EILEMLDHPF 147
LG G G V +Q+ +K + FA K++ R E R + I+ ++D
Sbjct: 25 LGLGINGKV--LQIFNKRTQEK--FALKMLQDCPKARREVELHWRASQCPHIVRIVD--V 78
Query: 148 LPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMM 207
LYA C ++ E GG+L Q + D+ F E + A+++LH +
Sbjct: 79 YENLYAGRKC---LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 135
Query: 208 GIIYRDLKPENVLV---RSDGHIMLTDFDLS 235
I +RD+KPEN+L R + + LTDF +
Sbjct: 136 NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 166
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLA-----NVVARALEF- 377
Y+APE++ E + + D W+LG+ ++ L G PF +H L ++ + EF
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 241
Query: 378 -PKEPSVPGPAKDLIAQLLVKDPTRRM 403
P+ V K LI LL +PT+RM
Sbjct: 242 NPEWSEVSEEVKMLIRNLLKTEPTQRM 268
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 73/162 (45%), Gaps = 14/162 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER--EILEMLDHPF 147
LG G G V +Q+ +K + FA K++ R E R + I+ ++D
Sbjct: 24 LGLGINGKV--LQIFNKRTQEK--FALKMLQDCPKARREVELHWRASQCPHIVRIVD--V 77
Query: 148 LPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMM 207
LYA C ++ E GG+L Q + D+ F E + A+++LH +
Sbjct: 78 YENLYAGRKC---LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 134
Query: 208 GIIYRDLKPENVLV---RSDGHIMLTDFDLSLKGDNSTSTAQ 246
I +RD+KPEN+L R + + LTDF + + + S +
Sbjct: 135 NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTE 176
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLA-----NVVARALEF- 377
Y+APE++ E + + D W+LG+ ++ L G PF +H L ++ + EF
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 243
Query: 378 -PKEPSVPGPAKDLIAQLLVKDPTRRM 403
P+ V K LI LL +PT+RM
Sbjct: 244 NPEWSEVSEEVKMLIRNLLKTEPTQRM 270
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 14/151 (9%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER--EILEMLDHPF 147
LG G G V +Q+ +K + FA K++ R E R + I+ ++D
Sbjct: 26 LGLGINGKV--LQIFNKRTQEK--FALKMLQDCPKARREVELHWRASQCPHIVRIVD--V 79
Query: 148 LPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMM 207
LYA C ++ E GG+L Q + D+ F E + A+++LH +
Sbjct: 80 YENLYAGRKC---LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 136
Query: 208 GIIYRDLKPENVLV---RSDGHIMLTDFDLS 235
I +RD+KPEN+L R + + LTDF +
Sbjct: 137 NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLA-----NVVARALEF- 377
Y+APE++ E + + D W+LG+ ++ L G PF +H L ++ + EF
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 243
Query: 378 -PKEPSVPGPAKDLIAQLLVKDPTRRM 403
P+ V K LI LL +PT+RM
Sbjct: 244 NPEWSEVSEEVKMLIRNLLKTEPTQRM 270
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 14/151 (9%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER--EILEMLDHPF 147
LG G G V +Q+ +K + FA K++ R E R + I+ ++D
Sbjct: 26 LGLGINGKV--LQIFNKRTQEK--FALKMLQDCPKARREVELHWRASQCPHIVRIVD--V 79
Query: 148 LPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMM 207
LYA C ++ E GG+L Q + D+ F E + A+++LH +
Sbjct: 80 YENLYAGRKC---LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 136
Query: 208 GIIYRDLKPENVLV---RSDGHIMLTDFDLS 235
I +RD+KPEN+L R + + LTDF +
Sbjct: 137 NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLA-----NVVARALEF- 377
Y+APE++ E + + D W+LG+ ++ L G PF +H L ++ + EF
Sbjct: 189 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 247
Query: 378 -PKEPSVPGPAKDLIAQLLVKDPTRRM 403
P+ V K LI LL +PT+RM
Sbjct: 248 NPEWSEVSEEVKMLIRNLLKTEPTQRM 274
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 14/151 (9%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER--EILEMLDHPF 147
LG G G V +Q+ +K + FA K++ R E R + I+ ++D
Sbjct: 30 LGLGINGKV--LQIFNKRTQEK--FALKMLQDCPKARREVELHWRASQCPHIVRIVD--V 83
Query: 148 LPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMM 207
LYA C ++ E GG+L Q + D+ F E + A+++LH +
Sbjct: 84 YENLYAGRKC---LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 140
Query: 208 GIIYRDLKPENVLV---RSDGHIMLTDFDLS 235
I +RD+KPEN+L R + + LTDF +
Sbjct: 141 NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 171
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 7/154 (4%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
DLR + +LG G G V + + S A K + K +++S+ E+ RE+ M
Sbjct: 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKT-VSVAVKCL-KPDVLSQ-PEAMDDFIREVNAM 75
Query: 143 --LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
LDH L LY + P ++TE P G L + R R+ F + YA +V
Sbjct: 76 HSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSL-LDRLRKHQGHFLLGTLSRYAVQVAEG 133
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDL 234
+ +L I+RDL N+L+ + + + DF L
Sbjct: 134 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGIDHELTLANVVARALEFPKEPS 382
+ APE + +A D W G+ ++E+F YG P+ G++ L + P+
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 249
Query: 383 VPGPAKDLIAQLLVKDPTRR 402
P +++ Q P R
Sbjct: 250 CPQDIYNVMVQCWAHKPEDR 269
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLA-----NVVARALEF- 377
Y+APE++ E + + D W+LG+ ++ L G PF +H L ++ + EF
Sbjct: 190 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 248
Query: 378 -PKEPSVPGPAKDLIAQLLVKDPTRRM 403
P+ V K LI LL +PT+RM
Sbjct: 249 NPEWSEVSEEVKMLIRNLLKTEPTQRM 275
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 14/151 (9%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER--EILEMLDHPF 147
LG G G V +Q+ +K + FA K++ R E R + I+ ++D
Sbjct: 31 LGLGINGKV--LQIFNKRTQEK--FALKMLQDCPKARREVELHWRASQCPHIVRIVD--V 84
Query: 148 LPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMM 207
LYA C ++ E GG+L Q + D+ F E + A+++LH +
Sbjct: 85 YENLYAGRKC---LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 141
Query: 208 GIIYRDLKPENVLV---RSDGHIMLTDFDLS 235
I +RD+KPEN+L R + + LTDF +
Sbjct: 142 NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 172
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMD-KRELVSRNKESRARIEREILE 141
D + LG+G+ G V+ V K +G A K++ + + RN+ R E ++L
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKP----SGLVMARKLIHLEIKPAIRNQIIR---ELQVLH 62
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL-HVLRQRQPDKRFHESAVRFYASEVVVA 200
+ P++ Y + E GG L VL++ R E + + V+
Sbjct: 63 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKG 119
Query: 201 LEFL-HMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
L +L I++RD+KP N+LV S G I L DF +S
Sbjct: 120 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 155
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 24/122 (19%)
Query: 306 IVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTP------FK 359
+ + +D + FVGT Y++PE + G + D W++G+ + E+ G P F+
Sbjct: 154 VSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFE 213
Query: 360 GIDHELT-----LANVVARALEFPKEPSVPGPAKDLIAQLLVKDPTRRMGSK--MGATAI 412
+D+ + L + V +LEF +D + + L+K+P R K M I
Sbjct: 214 LLDYIVNEPPPKLPSAVF-SLEF----------QDFVNKCLIKNPAERADLKQLMVHAFI 262
Query: 413 KR 414
KR
Sbjct: 263 KR 264
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMD-KRELVSRNKESRARIEREILE 141
D + LG+G+ G V+ V K +G A K++ + + RN+ R E ++L
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKP----SGLVMARKLIHLEIKPAIRNQIIR---ELQVLH 86
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL-HVLRQRQPDKRFHESAVRFYASEVVVA 200
+ P++ Y + E GG L VL++ R E + + V+
Sbjct: 87 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKG 143
Query: 201 LEFL-HMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
L +L I++RD+KP N+LV S G I L DF +S
Sbjct: 144 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 179
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 306 IVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPF 358
+ + +D + SFVGT Y++PE + G + D W++G+ + E+ G P
Sbjct: 178 VSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLA-----NVVARALEF- 377
Y+APE++ E + + D W+LG+ ++ L G PF +H L ++ + EF
Sbjct: 191 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 249
Query: 378 -PKEPSVPGPAKDLIAQLLVKDPTRRM 403
P+ V K LI LL +PT+RM
Sbjct: 250 NPEWSEVSEEVKMLIRNLLKTEPTQRM 276
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 14/151 (9%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER--EILEMLDHPF 147
LG G G V +Q+ +K + FA K++ R E R + I+ ++D
Sbjct: 32 LGLGINGKV--LQIFNKRTQEK--FALKMLQDCPKARREVELHWRASQCPHIVRIVD--V 85
Query: 148 LPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMM 207
LYA C ++ E GG+L Q + D+ F E + A+++LH +
Sbjct: 86 YENLYAGRKC---LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 142
Query: 208 GIIYRDLKPENVLV---RSDGHIMLTDFDLS 235
I +RD+KPEN+L R + + LTDF +
Sbjct: 143 NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 173
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 11/153 (7%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
SDLR +G G G+VY ++ N A K M S K E L
Sbjct: 56 FSDLR---EIGHGSFGAVYF----ARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFL 108
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLR-QRQPDKRFHESAVRFYASEVVV 199
+ L HP + L+ E+C G +L ++P + +AV A +
Sbjct: 109 QKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQ--- 165
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDF 232
L +LH +I+RD+K N+L+ G + L DF
Sbjct: 166 GLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDF 198
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGN---AVDWWTLGIFIFEL 351
KLG+ G+ I+A + FVGT ++APE+I G VD W+LGI EL
Sbjct: 194 KLGDFGSASIMAP-----ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 34/56 (60%)
Query: 184 RFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGD 239
+F E +++ +++ L+++H G+++RDLKP N+ V D + + DF L+ D
Sbjct: 122 KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDHEL 365
+A D +V T Y APE+I H N VD W++G + E+ G T FKG D+
Sbjct: 172 LARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD 231
Query: 366 TLANVVARALEFPKEPSVPG 385
L ++ K VPG
Sbjct: 232 QLTQIL-------KVTGVPG 244
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 7/155 (4%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
DLR + +LG G G V + + S A K + K +++S+ E+ RE+
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKT-VSVAVKCL-KPDVLSQ-PEAMDDFIREVNA 64
Query: 142 M--LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
M LDH L LY + P ++TE P G L + R R+ F + YA +V
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSL-LDRLRKHQGHFLLGTLSRYAVQVAE 122
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDL 234
+ +L I+RDL N+L+ + + + DF L
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGIDHELTLANVVARALEFPKEPS 382
+ APE + +A D W G+ ++E+F YG P+ G++ L + P+
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
Query: 383 VPGPAKDLIAQLLVKDPTRR 402
P +++ Q P R
Sbjct: 240 CPQDIYNVMVQCWAHKPEDR 259
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH 363
+V T Y APE+I G G+ VD W++G+ + E+ G F G DH
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDH 230
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+++V ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 134 QMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLA-----NVVARALEF- 377
Y+APE++ E + + D W+LG+ ++ L G PF +H L ++ + EF
Sbjct: 199 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFP 257
Query: 378 -PKEPSVPGPAKDLIAQLLVKDPTRRM 403
P+ V K LI LL +PT+RM
Sbjct: 258 NPEWSEVSEEVKMLIRNLLKTEPTQRM 284
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 14/151 (9%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER--EILEMLDHPF 147
LG G G V +Q+ +K + FA K++ R E R + I+ ++D
Sbjct: 40 LGLGINGKV--LQIFNKRTQEK--FALKMLQDCPKARREVELHWRASQCPHIVRIVD--V 93
Query: 148 LPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMM 207
LYA C ++ E GG+L Q + D+ F E + A+++LH +
Sbjct: 94 YENLYAGRKC---LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 150
Query: 208 GIIYRDLKPENVLV---RSDGHIMLTDFDLS 235
I +RD+KPEN+L R + + LTDF +
Sbjct: 151 NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 181
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH 363
+V T Y APE+I G G+ VD W++G+ + E+ G F G DH
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDH 230
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++V ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 162 CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV 221
L+ E D L Q D +RFY E++ AL++ H MGI++RD+KP NVL+
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTD-----YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLI 164
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++V ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH 363
+V T Y APE+I G G+ VD W++G + E+ G F G DH
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 230
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 11/155 (7%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMD-KRELVSRNKESRARIEREILE 141
D + LG+G+ G V+ V K +G A K++ + + RN+ R E ++L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKP----SGLVMARKLIHLEIKPAIRNQIIR---ELQVLH 59
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
+ P++ Y + E GG L + ++ R E + + V+ L
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGL 117
Query: 202 EFL-HMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+L I++RD+KP N+LV S G I L DF +S
Sbjct: 118 TYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 306 IVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPF 358
+ + +D + SFVGT Y++PE + G + D W++G+ + E+ G P
Sbjct: 151 VSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 11/155 (7%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMD-KRELVSRNKESRARIEREILE 141
D + LG+G+ G V+ V K +G A K++ + + RN+ R E ++L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKP----SGLVMARKLIHLEIKPAIRNQIIR---ELQVLH 59
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
+ P++ Y + E GG L + ++ R E + + V+ L
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGL 117
Query: 202 EFL-HMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+L I++RD+KP N+LV S G I L DF +S
Sbjct: 118 TYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 306 IVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPF 358
+ + +D + SFVGT Y++PE + G + D W++G+ + E+ G P
Sbjct: 151 VSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 7/155 (4%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
DLR + +LG G G V + + S A K + K +++S+ E+ RE+
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKT-VSVAVKCL-KPDVLSQ-PEAMDDFIREVNA 64
Query: 142 M--LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
M LDH L LY + P ++TE P G L + R R+ F + YA +V
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSL-LDRLRKHQGHFLLGTLSRYAVQVAE 122
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDL 234
+ +L I+RDL N+L+ + + + DF L
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGIDHELTLANVVARALEFPKEPS 382
+ APE + +A D W G+ ++E+F YG P+ G++ L + P+
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
Query: 383 VPGPAKDLIAQLLVKDPTRR 402
P +++ Q P R
Sbjct: 240 CPQDIYNVMVQCWAHKPEDR 259
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 76/179 (42%), Gaps = 16/179 (8%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARI-ER 137
L + +L+ + +G G+ G V L + C + + ++A + E
Sbjct: 9 LNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKC------------IKNDATAQAFLAEA 56
Query: 138 EILEMLDHPFLPTLYATLDCPRWSC-LLTEFCPGGDL-HVLRQRQPDKRFHESAVRFYAS 195
++ L H L L + + ++TE+ G L LR R + ++F +
Sbjct: 57 SVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF-SL 115
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPP 254
+V A+E+L ++RDL NVLV D ++DF L+ + ++ T +L + P
Sbjct: 116 DVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP 174
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 76/178 (42%), Gaps = 20/178 (11%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMD---KRELVSRNKESRARIERE 138
S++ R+GSG G+VY K K + KV+D ++ RN+ + R R
Sbjct: 36 SEVMLSTRIGSGSFGTVY----KGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRH 91
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
+ + L Y T D ++T++C G L+ Q K F + A +
Sbjct: 92 V-----NILLFMGYMTKDNL---AIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTA 142
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTG 256
+++LH II+RD+K N+ + + + DF L+ + + Q+ PTG
Sbjct: 143 QGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV----EQPTG 196
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH 363
FV T Y APE+I G G+ VD W++G + E+ G F G DH
Sbjct: 187 FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 232
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 132 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 175
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 23/154 (14%)
Query: 85 RFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLD 144
RF ++G G G+VY + G A + M+ ++ + + I EIL M +
Sbjct: 25 RF-EKIGQGASGTVY----TAMDVATGQEVAIRQMNLQQ-----QPKKELIINEILVMRE 74
Query: 145 HPFLPTLYATLDC-----PRWSCLLTEFCPGGDL-HVLRQRQPDKRFHESAVRFYASEVV 198
+ P + LD W ++ E+ GG L V+ + D E + E +
Sbjct: 75 NKN-PNIVNYLDSYLVGDELW--VVMEYLAGGSLTDVVTETCMD----EGQIAAVCRECL 127
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDF 232
ALEFLH +I+R++K +N+L+ DG + LTDF
Sbjct: 128 QALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDF 161
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 15/141 (10%)
Query: 310 PLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLAN 369
P + + VGT ++APE+++ + +G VD W+LGI E+ G P+ + L
Sbjct: 169 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 228
Query: 370 VVARAL-EFPKEPSVPGPAKDLIAQLLVKDPTRRMGSKMGATAIKRHQFFNGVNWALLRC 428
+ E + +D + + L D +R GS A + +HQF L+
Sbjct: 229 IATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR-GS---AKELIQHQF--------LKI 276
Query: 429 AKP--PFIPRPVTCRDLTTTN 447
AKP P ++ T N
Sbjct: 277 AKPLSSLTPLIAAAKEATKNN 297
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 76/179 (42%), Gaps = 16/179 (8%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARI-ER 137
L + +L+ + +G G+ G V L + C + + ++A + E
Sbjct: 18 LNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKC------------IKNDATAQAFLAEA 65
Query: 138 EILEMLDHPFLPTLYATLDCPRWSC-LLTEFCPGGDL-HVLRQRQPDKRFHESAVRFYAS 195
++ L H L L + + ++TE+ G L LR R + ++F +
Sbjct: 66 SVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF-SL 124
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPP 254
+V A+E+L ++RDL NVLV D ++DF L+ + ++ T +L + P
Sbjct: 125 DVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP 183
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 7/154 (4%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
DLR + +LG G G V + + S A K + K +++S+ E+ RE+ M
Sbjct: 13 DLRLLEKLGDGSFGVVRRGEWDAPSGKT-VSVAVKCL-KPDVLSQ-PEAMDDFIREVNAM 69
Query: 143 --LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
LDH L LY + P ++TE P G L + R R+ F + YA +V
Sbjct: 70 HSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSL-LDRLRKHQGHFLLGTLSRYAVQVAEG 127
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDL 234
+ +L I+RDL N+L+ + + + DF L
Sbjct: 128 MGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGIDHELTLANVVARALEFPKEPS 382
+ APE + +A D W G+ ++E+F YG P+ G++ L + P+
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 243
Query: 383 VPGPAKDLIAQLLVKDPTRR 402
P +++ Q P R
Sbjct: 244 CPQDIYNVMVQCWAHKPEDR 263
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 17/197 (8%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARI-ER 137
L + +L+ + +G G+ G V L + C + + ++A + E
Sbjct: 3 LNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKC------------IKNDATAQAFLAEA 50
Query: 138 EILEMLDHPFLPTLYATLDCPRWSC-LLTEFCPGGDL-HVLRQRQPDKRFHESAVRFYAS 195
++ L H L L + + ++TE+ G L LR R + ++F +
Sbjct: 51 SVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF-SL 109
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQL-VSDQSPP 254
+V A+E+L ++RDL NVLV D ++DF L+ + ++ T +L V +P
Sbjct: 110 DVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPE 169
Query: 255 TGDQQPNDCAVDQPPFG 271
++ D FG
Sbjct: 170 ALREKKFSTKSDVWSFG 186
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 11/153 (7%)
Query: 81 LSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREIL 140
SDLR +G G G+VY ++ N A K M S K E L
Sbjct: 17 FSDLR---EIGHGSFGAVYF----ARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFL 69
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLR-QRQPDKRFHESAVRFYASEVVV 199
+ L HP + L+ E+C G +L ++P + +AV A +
Sbjct: 70 QKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQ--- 126
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDF 232
L +LH +I+RD+K N+L+ G + L DF
Sbjct: 127 GLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDF 159
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGN---AVDWWTLGIFIFEL 351
KLG+ G+ I+A + FVGT ++APE+I G VD W+LGI EL
Sbjct: 155 KLGDFGSASIMAP-----ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 7/155 (4%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
DLR + +LG G G +V+ + +G + V + V E+ RE+
Sbjct: 8 KDLRLLEKLGDGSFG---VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 142 M--LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
M LDH L LY + P ++TE P G L + R R+ F + YA +V
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSL-LDRLRKHQGHFLLGTLSRYAVQVAE 122
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDL 234
+ +L I+RDL N+L+ + + + DF L
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGIDHELTLANVVARALEFPKEPS 382
+ APE + +A D W G+ ++E+F YG P+ G++ L + P+
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
Query: 383 VPGPAKDLIAQLLVKDPTRR 402
P +++ Q P R
Sbjct: 240 CPQDIYNVMVQCWAHKPEDR 259
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 19/172 (11%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L +D++F +G G+ G V LK++ +G A + +E S++ E E
Sbjct: 19 LDWNDIKFQDVIGEGNFGQV----LKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELE 74
Query: 139 IL-EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL-HVLRQR---QPDKRF-------- 185
+L ++ HP + L + + L E+ P G+L LR+ + D F
Sbjct: 75 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 134
Query: 186 --HESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +A++V +++L I+R+L N+LV + + DF LS
Sbjct: 135 TLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLS 186
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 151 LYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGII 210
LYA C ++ E GG+L Q + D+ F E + A+++LH + I
Sbjct: 127 LYAGRKC---LLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIA 183
Query: 211 YRDLKPENVLV---RSDGHIMLTDFDLS 235
+RD+KPEN+L R + + LTDF +
Sbjct: 184 HRDVKPENLLYTSKRPNAILKLTDFGFA 211
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLA-----NVVARALEF- 377
Y+APE++ E + + D W+LG+ + L G PF +H L ++ + EF
Sbjct: 229 YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYS-NHGLAISPGXKTRIRXGQYEFP 287
Query: 378 -PKEPSVPGPAKDLIAQLLVKDPTRR 402
P+ V K LI LL +PT+R
Sbjct: 288 NPEWSEVSEEVKXLIRNLLKTEPTQR 313
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 11/164 (6%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
++ V +LG+G G V++ NN A K + + + A + ++ L
Sbjct: 14 IKLVKKLGAGQFGEVWM-----GYYNNSTKVAVKTLKPGTMSVQAFLEEANL----MKTL 64
Query: 144 DHPFLPTLYATLDCPRWSCLLTEFCPGGDL-HVLRQRQPDKRFHESAVRFYASEVVVALE 202
H L LYA + ++TEF G L L+ + K + F ++++ +
Sbjct: 65 QHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDF-SAQIAEGMA 123
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
++ I+RDL+ NVLV + DF L+ +++ TA+
Sbjct: 124 YIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR 167
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 12/149 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKREL-----VSRNKESRARIEREILEMLD 144
LGSG G V+ K K+ K + K ++ + K + +E IL ++
Sbjct: 32 LGSGAFGFVWTAVDKEKNKE----VVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVE 87
Query: 145 HPFLPTLYATLDCPRWSCLLTE-FCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEF 203
H + + + + L+ E G DL R P R E + ++V A+ +
Sbjct: 88 HANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGY 145
Query: 204 LHMMGIIYRDLKPENVLVRSDGHIMLTDF 232
L + II+RD+K EN+++ D I L DF
Sbjct: 146 LRLKDIIHRDIKDENIVIAEDFTIKLIDF 174
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 317 SFVGTHEYLAPEIISGEGH-GNAVDWWTLGIFIFELFYGTTPF 358
+F GT EY APE++ G + G ++ W+LG+ ++ L + PF
Sbjct: 188 TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 19/162 (11%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV S +G A K + R S R E +L+ + H
Sbjct: 59 VGSGAYGSV----CSSYDVKSGLKIAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHE--- 110
Query: 150 TLYATLDCPRWSCLLTEF--------CPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
+ LD + L EF G DL+ + + Q + + V+F +++ L
Sbjct: 111 NVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGL 167
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
+++H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 168 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 209
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDHEL 365
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 200 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHIN 259
Query: 366 TLANVV 371
L ++
Sbjct: 260 QLQQIM 265
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 72/177 (40%), Gaps = 33/177 (18%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI--L 140
D + + +GSG G V+ K+K +G K ++ R K + + ERE+ L
Sbjct: 12 DFKEIELIGSGGFGQVF----KAKHRIDG---------KTYVIKRVKYNNEKAEREVKAL 58
Query: 141 EMLDHPFLPTLYATLDC--------------PRWSCLLT--EFCPGGDLHVLRQRQPDKR 184
LDH + D + CL EFC G L +++ ++
Sbjct: 59 AKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 118
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDL--SLKGD 239
+ ++ ++++H +I RDLKP N+ + + + DF L SLK D
Sbjct: 119 LDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 175
Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 320 GTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFY 353
GT Y++PE IS + +G VD + LG+ + EL +
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLH 216
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 314 RSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVAR 373
++ + +GT +YL+PE G+ D ++LG ++E+ G PF G D +++A R
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQHVR 233
Query: 374 ALEFPKEPSVPGPAKDL---IAQLLVKDPTRR--MGSKMGATAIKRHQFFNGVNWALLRC 428
P G + DL + + L K+P R ++M A ++ H NG
Sbjct: 234 EDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH---NG-------- 282
Query: 429 AKPPFIPRPVTCRDLTTTNSS 449
+PP P+ +T + T+ SS
Sbjct: 283 -EPPEAPKVLTDAERTSLLSS 302
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSL----KGDNSTSTAQLV 248
AL F H GII+RD+KP N+++ + + + DF ++ G++ T TA ++
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 314 RSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVAR 373
++ + +GT +YL+PE G+ D ++LG ++E+ G PF G D +++A R
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQHVR 233
Query: 374 ALEFPKEPSVPGPAKDL---IAQLLVKDPTRR--MGSKMGATAIKRHQFFNGVNWALLRC 428
P G + DL + + L K+P R ++M A ++ H NG
Sbjct: 234 EDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH---NG-------- 282
Query: 429 AKPPFIPRPVTCRDLTTTNSS 449
+PP P+ +T + T+ SS
Sbjct: 283 -EPPEAPKVLTDAERTSLLSS 302
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLK-GDNSTSTAQ 246
AL F H GII+RD+KP N+L+ + + + DF ++ D+ S Q
Sbjct: 128 ALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQ 175
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 314 RSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVAR 373
++ + +GT +YL+PE G+ D ++LG ++E+ G PF G D +++A R
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQHVR 233
Query: 374 ALEFPKEPSVPGPAKDL---IAQLLVKDPTRR--MGSKMGATAIKRHQFFNGVNWALLRC 428
P G + DL + + L K+P R ++M A ++ H NG
Sbjct: 234 EDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH---NG-------- 282
Query: 429 AKPPFIPRPVTCRDLTTTNSS 449
+PP P+ +T + T+ SS
Sbjct: 283 -EPPEAPKVLTDAERTSLLSS 302
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSL----KGDNSTSTAQLV 248
AL F H GII+RD+KP N+++ + + + DF ++ G++ T TA ++
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 18/164 (10%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVM-------DKRELVSRNKES 131
+ +S ++ +G+G+ G V +LK+ C A K + +RE +S
Sbjct: 13 IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCV-AIKTLKGGYTERQRREFLS----- 66
Query: 132 RARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVR 191
E I+ +HP + L + +LTEF G L R D +F +
Sbjct: 67 ----EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSF-LRLNDGQFTVIQLV 121
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ + +L M ++RDL N+LV S+ ++DF LS
Sbjct: 122 GMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLS 165
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGIDHELTLANVVARALEFPKEPS 382
+ APE I+ +A D W+ GI ++E+ +G P+ + ++ + N + + P P
Sbjct: 189 WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQ-DVINAIEQDYRLPPPPD 247
Query: 383 VPGPAKDLIAQLLVKDPTRR 402
P L+ KD R
Sbjct: 248 CPTSLHQLMLDCWQKDRNAR 267
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 105 SKSSNNGCF---FAAKVMDKRELVSRNKESRARI----EREILEMLDHPFLPTL----YA 153
+K NG F + AK+ D ELV+ K + + E +I+ LDH + L Y+
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYS 84
Query: 154 TLDCPR--WSCLLTEFCPGGDLHVLRQRQPDKR-FHESAVRFYASEVVVALEFLHMMGII 210
+ + + L+ ++ P V R K+ V+ Y ++ +L ++H GI
Sbjct: 85 SGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 144
Query: 211 YRDLKPENVLVRSDGHIM-LTDF 232
+RD+KP+N+L+ D ++ L DF
Sbjct: 145 HRDIKPQNLLLDPDTAVLKLCDF 167
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 32/133 (24%)
Query: 315 SMSFVGTHEYLAPEIISGEG-HGNAVDWWTLGIFIFELFYGTTPF---KGIDHELTLANV 370
++S + + Y APE+I G + +++D W+ G + EL G F G+D + + V
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 371 VA--------------RALEFPK----------EPSVPGPAKDLIAQLLVKDPTRRMGSK 406
+ FP+ P P A L ++LL PT R+ +
Sbjct: 239 LGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL-TP 297
Query: 407 MGATAIKRHQFFN 419
+ A A H FF+
Sbjct: 298 LEACA---HSFFD 307
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 33/55 (60%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGD 239
F E +++ +++ L+++H G+++RDLKP N+ V D + + DF L+ D
Sbjct: 141 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDHEL 365
+A D +V T Y APE+I H N VD W++G + E+ G T FKG D+
Sbjct: 190 LARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD 249
Query: 366 TLANVVARALEFPKEPSVPG 385
L ++ K VPG
Sbjct: 250 QLTQIL-------KVTGVPG 262
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 66/169 (39%), Gaps = 48/169 (28%)
Query: 187 ESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
E ++ ++V ++++H GI++RDLKP N LV D + + DF L+
Sbjct: 155 ELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLAR---------- 204
Query: 247 LVSDQSPPTGDQQPNDCAVDQPPFGNSSCIIP--NCIVPAVSCLHPKRRRKKKLGNPGTP 304
VD P GNS I + V+ H K +++ G+
Sbjct: 205 -----------------TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGH---- 243
Query: 305 EIVAEPLDVRSMSFVGTHEYLAPE-IISGEGHGNAVDWWTLGIFIFELF 352
V T Y APE I+ E + A+D W++G EL
Sbjct: 244 --------------VVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 314 RSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVAR 373
++ + +GT +YL+PE G+ D ++LG ++E+ G PF G D +++A R
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQHVR 233
Query: 374 ALEFPKEPSVPGPAKDL---IAQLLVKDPTRR--MGSKMGATAIKRHQFFNGVNWALLRC 428
P G + DL + + L K+P R ++M A ++ H NG
Sbjct: 234 EDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH---NG-------- 282
Query: 429 AKPPFIPRPVTCRDLTTTNSS 449
+PP P+ +T + T+ SS
Sbjct: 283 -EPPEAPKVLTDAERTSLLSS 302
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 16/128 (12%)
Query: 132 RARIEREILEMLDHPFLPTLYATLDCPRWSC----LLTEFCPGGDLH-VLRQRQP--DKR 184
R R E + L+HP + +YAT + + ++ E+ G L ++ P KR
Sbjct: 58 RFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSL----KGDN 240
E ++ AL F H GII+RD+KP N+++ + + + DF ++ G++
Sbjct: 118 AIE-----VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 241 STSTAQLV 248
T TA ++
Sbjct: 173 VTQTAAVI 180
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 162 CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV 221
L+ E D L Q D +RFY E++ AL++ H MGI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTD-----YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 11/164 (6%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
++ V RLG+G G V++ NN A K + + + A + ++ L
Sbjct: 15 IKLVKRLGAGQFGEVWM-----GYYNNSTKVAVKTLKPGTMSVQAFLEEANL----MKTL 65
Query: 144 DHPFLPTLYATLDCPRWSCLLTEFCPGGDL-HVLRQRQPDKRFHESAVRFYASEVVVALE 202
H L LYA + ++TE+ G L L+ + K + F ++++ +
Sbjct: 66 QHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDF-SAQIAEGMA 124
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
++ I+RDL+ NVLV + DF L+ +++ TA+
Sbjct: 125 YIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR 168
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 26/32 (81%)
Query: 190 VRFYASEVVVALEFLHMMGIIYRDLKPENVLV 221
+RFY E++ AL++ H MGI++RD+KP NV++
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 162 CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV 221
L+ E D L Q D +RFY E++ AL++ H MGI++RD+KP NV++
Sbjct: 109 ALVFEHVNNTDFKQLYQTLTD-----YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 162 CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV 221
L+ E D L Q D +RFY E++ AL++ H MGI++RD+KP NV++
Sbjct: 109 ALVFEHVNNTDFKQLYQTLTD-----YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 162 CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV 221
L+ E D L Q D +RFY E++ AL++ H MGI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTD-----YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 4/146 (2%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSGD G V +L+ + A K + K R + E I+ DHP +
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRD-VPVAIKAL-KAGYTERQRRDFLS-EASIMGQFDHPNII 113
Query: 150 TLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGI 209
L + R + ++TE+ G L R D +F + V + +L +G
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTF-LRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY 172
Query: 210 IYRDLKPENVLVRSDGHIMLTDFDLS 235
++RDL NVLV S+ ++DF LS
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLS 198
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFE-LFYGTTPFKGIDHELTLANVVARALEFPKEPS 382
+ APE I+ +A D W+ G+ ++E L YG P+ + + +++ V P
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISS-VEEGYRLPAPMG 278
Query: 383 VPGPAKDLIAQLLVKDPTRR 402
P L+ KD +R
Sbjct: 279 CPHALHQLMLDCWHKDRAQR 298
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 162 CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV 221
L+ E D L Q D +RFY E++ AL++ H MGI++RD+KP NV++
Sbjct: 108 ALVFEHVNNTDFKQLYQTLTD-----YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 162
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 17/158 (10%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMD-KRELVSRNKESRARIEREILE 141
D + LG+G+ G V+ V K +G A K++ + + RN+ R E ++L
Sbjct: 26 DFEKISELGAGNGGVVFKVSHKP----SGLVMARKLIHLEIKPAIRNQIIR---ELQVLH 78
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL-HVLRQ--RQPDKRFHESAVRFYASEVV 198
+ P++ Y + E GG L VL++ R P++ + ++ V+
Sbjct: 79 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI-----AVI 133
Query: 199 VALEFL-HMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
L +L I++RD+KP N+LV S G I L DF +S
Sbjct: 134 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 171
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 306 IVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHEL 365
+ + +D + SFVGT Y++PE + G + D W++G+ + E+ G P +
Sbjct: 170 VSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSM 229
Query: 366 TLANVVARALEFPKEPSVPGPA-----KDLIAQLLVKDPTRR 402
+ ++ + P P +P +D + + L+K+P R
Sbjct: 230 AIFELLDYIVNEPP-PKLPSGVFSLEFQDFVNKCLIKNPAER 270
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 4/146 (2%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSGD G V +L+ + A K + K R + E I+ DHP +
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRD-VPVAIKAL-KAGYTERQRRDFLS-EASIMGQFDHPNII 113
Query: 150 TLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGI 209
L + R + ++TE+ G L R D +F + V + +L +G
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTF-LRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY 172
Query: 210 IYRDLKPENVLVRSDGHIMLTDFDLS 235
++RDL NVLV S+ ++DF LS
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLS 198
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFE-LFYGTTPFKGIDHELTLANVVARALEFPKEPS 382
+ APE I+ +A D W+ G+ ++E L YG P+ + + +++ V P
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISS-VEEGYRLPAPMG 278
Query: 383 VPGPAKDLIAQLLVKDPTRR 402
P L+ KD +R
Sbjct: 279 CPHALHQLMLDCWHKDRAQR 298
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 162 CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV 221
L+ E D L Q D +RFY E++ AL++ H MGI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTD-----YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 162 CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV 221
L+ E D L Q D +RFY E++ AL++ H MGI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTD-----YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 28/143 (19%)
Query: 111 GCFFAAKVMDKRELVSRNK----------ESRARIEREILEMLDHPFLPTLYATLDCPRW 160
G F AK + E+V+ + S A E +L+ L H + L+ L +
Sbjct: 16 GTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK 75
Query: 161 SCLLTEFCPGGDLHVLRQRQPDKRFHESA--------VRFYASEVVVALEFLHMMGIIYR 212
L+ EFC Q K++ +S V+ + +++ L F H +++R
Sbjct: 76 LTLVFEFCD----------QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHR 125
Query: 213 DLKPENVLVRSDGHIMLTDFDLS 235
DLKP+N+L+ +G + L +F L+
Sbjct: 126 DLKPQNLLINRNGELKLANFGLA 148
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 24/176 (13%)
Query: 79 LTLSDLRFVHRLGSGDIGSV---YLVQLKSKSSNNGCFFAAKVMD---KRELVSRNKESR 132
LTL D LGSG+ G+V Y K + + D K EL++
Sbjct: 370 LTLED----KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA------ 419
Query: 133 ARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRF 192
E +++ LD+P++ + + W L+ E G L+ + Q ++ + +
Sbjct: 420 ---EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIE 473
Query: 193 YASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTAQ 246
+V + +++L ++RDL NVL+ + + ++DF LS L+ D + AQ
Sbjct: 474 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
++ APE I+ + D W+ G+ ++E F YG P++G+
Sbjct: 537 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 576
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 162 CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV 221
L+ E D L Q D +RFY E++ AL++ H MGI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTD-----YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 162 CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV 221
L+ E D L Q D +RFY E++ AL++ H MGI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTD-----YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 30 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQ---KLTDDHVQFLIYQILRGLKYI 141
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT 180
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 162 CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV 221
L+ E D L Q D +RFY E++ AL++ H MGI++RD+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTD-----YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 62/154 (40%), Gaps = 10/154 (6%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
S+L FV +GSG G V+L +K M + + + E E++
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---------EAEVMM 57
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
L HP L LY CL+ EF G L + Q F + +V +
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGM 116
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+L +I+RDL N LV + I ++DF ++
Sbjct: 117 AYLEEASVIHRDLAARNCLVGENQVIKVSDFGMT 150
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 24/176 (13%)
Query: 79 LTLSDLRFVHRLGSGDIGSV---YLVQLKSKSSNNGCFFAAKVMD---KRELVSRNKESR 132
LTL D LGSG+ G+V Y K + + D K EL++
Sbjct: 371 LTLED----KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA------ 420
Query: 133 ARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRF 192
E +++ LD+P++ + + W L+ E G L+ + Q ++ + +
Sbjct: 421 ---EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIE 474
Query: 193 YASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTAQ 246
+V + +++L ++RDL NVL+ + + ++DF LS L+ D + AQ
Sbjct: 475 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 530
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
++ APE I+ + D W+ G+ ++E F YG P++G+
Sbjct: 538 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 577
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 4/157 (2%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
+ +S ++ +G+G+ G V +LK+ C A K + + +E + E
Sbjct: 11 IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCV-AIKTLKGGYTERQRREFLS--EAS 67
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
I+ +HP + L + +LTEF G L R D +F + +
Sbjct: 68 IMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSF-LRLNDGQFTVIQLVGMLRGIA 126
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +L M ++RDL N+LV S+ ++DF LS
Sbjct: 127 SGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLS 163
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGIDHELTLANVVARALEFPKEPS 382
+ APE I+ +A D W+ GI ++E+ +G P+ + ++ + N + + P P
Sbjct: 187 WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQ-DVINAIEQDYRLPPPPD 245
Query: 383 VPGPAKDLIAQLLVKDPTRR 402
P L+ KD R
Sbjct: 246 CPTSLHQLMLDCWQKDRNAR 265
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 7/147 (4%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
LG G G VY + + A K K++ NKE + E I++ LDHP +
Sbjct: 32 LGEGFFGEVY-EGVYTNHKGEKINVAVKTC-KKDCTLDNKE-KFMSEAVIMKNLDHPHIV 88
Query: 150 TLYATLDC-PRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMG 208
L ++ P W ++ E P G+L +R + + Y+ ++ A+ +L +
Sbjct: 89 KLIGIIEEEPTW--IIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKAMAYLESIN 145
Query: 209 IIYRDLKPENVLVRSDGHIMLTDFDLS 235
++RD+ N+LV S + L DF LS
Sbjct: 146 CVHRDIAVRNILVASPECVKLGDFGLS 172
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 14/151 (9%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER--EILEMLDHPF 147
LG G G V +Q+ +K + FA K++ R E R + I+ ++D
Sbjct: 26 LGLGINGKV--LQIFNKRTQEK--FALKMLQDCPKARREVELHWRASQCPHIVRIVD--V 79
Query: 148 LPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMM 207
LYA C ++ E GG+L Q + D+ F E + A+++LH +
Sbjct: 80 YENLYAGRKC---LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 136
Query: 208 GIIYRDLKPENVLV---RSDGHIMLTDFDLS 235
I +RD+KPEN+L R + + LTDF +
Sbjct: 137 NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 331 SGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLA-----NVVARALEF--PKEPSV 383
+GE + + D W+LG+ ++ L G PF +H L ++ + EF P+ V
Sbjct: 171 TGEKYDKSCDMWSLGVIMYILLCGYPPFYS-NHGLAISPGMKTRIRMGQYEFPNPEWSEV 229
Query: 384 PGPAKDLIAQLLVKDPTRRM 403
K LI LL +PT+RM
Sbjct: 230 SEEVKMLIRNLLKTEPTQRM 249
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 157 CPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKP 216
R L+ E D L Q D +RFY E++ AL++ H MGI++RD+KP
Sbjct: 110 VSRTPALVFEHVNNTDFKQLYQTLTD-----YDIRFYMYEILKALDYCHSMGIMHRDVKP 164
Query: 217 ENVLV 221
NV++
Sbjct: 165 HNVMI 169
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 7/147 (4%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
LG G G VY + + A K K++ NKE + E I++ LDHP +
Sbjct: 20 LGEGFFGEVY-EGVYTNHKGEKINVAVKTC-KKDCTLDNKE-KFMSEAVIMKNLDHPHIV 76
Query: 150 TLYATLDC-PRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMG 208
L ++ P W ++ E P G+L +R + + Y+ ++ A+ +L +
Sbjct: 77 KLIGIIEEEPTW--IIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKAMAYLESIN 133
Query: 209 IIYRDLKPENVLVRSDGHIMLTDFDLS 235
++RD+ N+LV S + L DF LS
Sbjct: 134 CVHRDIAVRNILVASPECVKLGDFGLS 160
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 7/147 (4%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
LG G G VY + + A K K++ NKE + E I++ LDHP +
Sbjct: 16 LGEGFFGEVY-EGVYTNHKGEKINVAVKTC-KKDCTLDNKE-KFMSEAVIMKNLDHPHIV 72
Query: 150 TLYATLDC-PRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMG 208
L ++ P W ++ E P G+L +R + + Y+ ++ A+ +L +
Sbjct: 73 KLIGIIEEEPTW--IIMELYPYGELGHYLERNKNS-LKVLTLVLYSLQICKAMAYLESIN 129
Query: 209 IIYRDLKPENVLVRSDGHIMLTDFDLS 235
++RD+ N+LV S + L DF LS
Sbjct: 130 CVHRDIAVRNILVASPECVKLGDFGLS 156
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 15/159 (9%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI-LE 141
DL + LG G G V K + +G A K + R V+ ++ R + +I
Sbjct: 35 DLEPIXELGRGAYGVVE----KXRHVPSGQIXAVKRI--RATVNSQEQKRLLXDLDISXR 88
Query: 142 MLDHPFLPTLYATL--DCPRWSCLLTEFCPGGDLHVLRQRQPDK--RFHESAVRFYASEV 197
+D PF T Y L + W C L ++ DK E + A +
Sbjct: 89 TVDCPFTVTFYGALFREGDVWICXE---LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSI 145
Query: 198 VVALEFLH-MMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
V ALE LH + +I+RD+KP NVL+ + G + DF +S
Sbjct: 146 VKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 21/158 (13%)
Query: 89 RLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKES---RARIEREILEMLDH 145
++G G G V+ K++ G KV K+ L+ KE A E +IL++L H
Sbjct: 25 KIGQGTFGEVF----KARHRKTG----QKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 146 PFLPTLYA---TLDCPRWSC-----LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
+ L T P C L+ +FC DL L K F S ++ +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVK-FTLSEIKRVMQML 134
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ L ++H I++RD+K NVL+ DG + L DF L+
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 12/149 (8%)
Query: 89 RLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFL 148
+LG G +VY + KSK ++N ++ E A E +L+ L H +
Sbjct: 9 KLGEGTYATVY--KGKSKLTDNLVALKEIRLEHEE----GAPCTAIREVSLLKDLKHANI 62
Query: 149 PTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPD--KRFHESAVRFYASEVVVALEFLHM 206
TL+ + + L+ E+ L+Q D + V+ + +++ L + H
Sbjct: 63 VTLHDIIHTEKSLTLVFEYLDKD----LKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR 118
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+++RDLKP+N+L+ G + L DF L+
Sbjct: 119 QKVLHRDLKPQNLLINERGELKLADFGLA 147
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 164 LTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRS 223
L G DL+ + + Q + + V+F +++ L+++H II+RDLKP N+ V
Sbjct: 104 LVTHLMGADLNNIVKSQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 224 DGHIMLTDFDLSLKGDNSTS 243
D + + DF L D+ +
Sbjct: 161 DSELKILDFGLCRHTDDEMT 180
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 318 FVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 30 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQ---KLTDDHVQFLIYQILRGLKYI 141
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 21/158 (13%)
Query: 89 RLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKES---RARIEREILEMLDH 145
++G G G V+ K++ G KV K+ L+ KE A E +IL++L H
Sbjct: 25 KIGQGTFGEVF----KARHRKTG----QKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 146 PFLPTLYA---TLDCPRWSC-----LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
+ L T P C L+ +FC DL L K F S ++ +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVK-FTLSEIKRVMQML 134
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ L ++H I++RD+K NVL+ DG + L DF L+
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 24/176 (13%)
Query: 79 LTLSDLRFVHRLGSGDIGSV---YLVQLKSKSSNNGCFFAAKVMD---KRELVSRNKESR 132
LTL D LGSG+ G+V Y K + + D K EL++
Sbjct: 28 LTLED----KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA------ 77
Query: 133 ARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRF 192
E +++ LD+P++ + + W L+ E G L+ + Q ++ + +
Sbjct: 78 ---EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIE 131
Query: 193 YASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTAQ 246
+V + +++L ++RDL NVL+ + + ++DF LS L+ D + AQ
Sbjct: 132 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 187
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
++ APE I+ + D W+ G+ ++E F YG P++G+
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 234
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 24/176 (13%)
Query: 79 LTLSDLRFVHRLGSGDIGSV---YLVQLKSKSSNNGCFFAAKVMD---KRELVSRNKESR 132
LTL D LGSG+ G+V Y K + + D K EL++
Sbjct: 28 LTLED----KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA------ 77
Query: 133 ARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRF 192
E +++ LD+P++ + + W L+ E G L+ + Q ++ + +
Sbjct: 78 ---EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIE 131
Query: 193 YASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTAQ 246
+V + +++L ++RDL NVL+ + + ++DF LS L+ D + AQ
Sbjct: 132 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 187
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
++ APE I+ + D W+ G+ ++E F YG P++G+
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 234
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 24/176 (13%)
Query: 79 LTLSDLRFVHRLGSGDIGSV---YLVQLKSKSSNNGCFFAAKVMD---KRELVSRNKESR 132
LTL D LGSG+ G+V Y K + + D K EL++
Sbjct: 26 LTLED----KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA------ 75
Query: 133 ARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRF 192
E +++ LD+P++ + + W L+ E G L+ + Q ++ + +
Sbjct: 76 ---EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIE 129
Query: 193 YASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTAQ 246
+V + +++L ++RDL NVL+ + + ++DF LS L+ D + AQ
Sbjct: 130 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 185
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
++ APE I+ + D W+ G+ ++E F YG P++G+
Sbjct: 193 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 232
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH 363
+V T Y APE+I G G+ VD W++G + E+ G F G DH
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 230
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH 363
+V T Y APE+I G G+ VD W++G + E+ G F G DH
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 230
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 21/158 (13%)
Query: 89 RLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKES---RARIEREILEMLDH 145
++G G G V+ K++ G KV K+ L+ KE A E +IL++L H
Sbjct: 25 KIGQGTFGEVF----KARHRKTG----QKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 146 PFLPTLYA---TLDCPRWSC-----LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
+ L T P C L+ +FC DL L K F S ++ +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVK-FTLSEIKRVMQML 134
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ L ++H I++RD+K NVL+ DG + L DF L+
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 62/154 (40%), Gaps = 10/154 (6%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
S+L FV +GSG G V+L +K M + + + E E++
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---------EAEVMM 57
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
L HP L LY CL+ EF G L + Q F + +V +
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGM 116
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+L +I+RDL N LV + I ++DF ++
Sbjct: 117 AYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT 150
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH 363
+V T Y APE+I G G+ VD W++G + E+ G F G DH
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 231
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 136 EREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYAS 195
E I+ DHP + L + + ++TE+ G L R+ D +F +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF-LRKHDAQFTVIQLVGMLR 154
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++L MG ++RDL N+L+ S+ ++DF LS
Sbjct: 155 GIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 62/154 (40%), Gaps = 10/154 (6%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
S+L FV +GSG G V+L +K M + + + E E++
Sbjct: 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---------EAEVMM 60
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
L HP L LY CL+ EF G L + Q F + +V +
Sbjct: 61 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGM 119
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+L +I+RDL N LV + I ++DF ++
Sbjct: 120 AYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT 153
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 32 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 86
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 87 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 143
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 144 HSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT 182
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 36 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 90
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 91 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 147
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 148 HSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMT 186
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH 363
+V T Y APE+I G G+ VD W++G + E+ G F G DH
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 230
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 24/176 (13%)
Query: 79 LTLSDLRFVHRLGSGDIGSV---YLVQLKSKSSNNGCFFAAKVMD---KRELVSRNKESR 132
LTL D LGSG+ G+V Y K + + D K EL++
Sbjct: 12 LTLED----KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA------ 61
Query: 133 ARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRF 192
E +++ LD+P++ + + W L+ E G L+ + Q ++ + +
Sbjct: 62 ---EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIE 115
Query: 193 YASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTAQ 246
+V + +++L ++RDL NVL+ + + ++DF LS L+ D + AQ
Sbjct: 116 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQ 171
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
++ APE I+ + D W+ G+ ++E F YG P++G+
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 218
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 35 IGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 89
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 146
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 147 HSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT 185
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 62/154 (40%), Gaps = 10/154 (6%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
S+L FV +GSG G V+L +K M + + + E E++
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---------EAEVMM 55
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
L HP L LY CL+ EF G L + Q F + +V +
Sbjct: 56 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGM 114
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+L +I+RDL N LV + I ++DF ++
Sbjct: 115 AYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT 148
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH 363
+V T Y APE+I G G+ VD W++G + E+ G F G DH
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 230
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
L+ + RLG+G G V++ + N A K + + + ES E +I++ L
Sbjct: 11 LQLIKRLGNGQFGEVWM-----GTWNGNTKVAIKTLKPGTM---SPESFLE-EAQIMKKL 61
Query: 144 DHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
H L LYA + + P + ++TE+ G L + + + A++V +
Sbjct: 62 KHDKLVQLYAVVSEEPIY--IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMA 119
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS-LKGDNSTSTAQ 246
++ M I+RDL+ N+LV + + DF L+ L DN + Q
Sbjct: 120 YIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQ 164
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 136 EREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYAS 195
E I+ DHP + L + + ++TE+ G L R+ D +F +
Sbjct: 84 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF-LRKHDAQFTVIQLVGMLR 142
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++L MG ++RDL N+L+ S+ ++DF LS
Sbjct: 143 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 182
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 105 SKSSNNGCF---FAAKVMDKRELVSRNKESRARI----EREILEMLDHPFLPTL----YA 153
+K NG F + AK+ D ELV+ K + + E +I+ LDH + L Y+
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYS 84
Query: 154 TLDCPR--WSCLLTEFCPGGDLHVLRQRQPDKR-FHESAVRFYASEVVVALEFLHMMGII 210
+ + + L+ ++ P V R K+ V+ Y ++ +L ++H GI
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 144
Query: 211 YRDLKPENVLVRSDGHIM-LTDF 232
+RD+KP+N+L+ D ++ L DF
Sbjct: 145 HRDIKPQNLLLDPDTAVLKLCDF 167
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 32/133 (24%)
Query: 315 SMSFVGTHEYLAPEIISGEG-HGNAVDWWTLGIFIFELFYGTTPF---KGIDHELTLANV 370
++S++ + Y APE+I G + +++D W+ G + EL G F G+D + + V
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 371 VA--------------RALEFPK----------EPSVPGPAKDLIAQLLVKDPTRRMGSK 406
+ FP+ P P A L ++LL PT R+ +
Sbjct: 239 LGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL-TP 297
Query: 407 MGATAIKRHQFFN 419
+ A A H FF+
Sbjct: 298 LEACA---HSFFD 307
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH 363
+V T Y APE+I G G+ VD W++G + E+ G F G DH
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 230
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 105 SKSSNNGCF---FAAKVMDKRELVSRNKESRARI----EREILEMLDHPFLPTL----YA 153
+K NG F + AK+ D ELV+ K + + E +I+ LDH + L Y+
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYS 84
Query: 154 TLDCPR--WSCLLTEFCPGGDLHVLRQRQPDKR-FHESAVRFYASEVVVALEFLHMMGII 210
+ + + L+ ++ P V R K+ V+ Y ++ +L ++H GI
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGIC 144
Query: 211 YRDLKPENVLVRSDGHIM-LTDF 232
+RD+KP+N+L+ D ++ L DF
Sbjct: 145 HRDIKPQNLLLDPDTAVLKLCDF 167
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 32/133 (24%)
Query: 315 SMSFVGTHEYLAPEIISGEG-HGNAVDWWTLGIFIFELFYGTTPF---KGIDHELTLANV 370
++S++ + Y APE+I G + +++D W+ G + EL G F G+D + + V
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 371 VA--------------RALEFPK----------EPSVPGPAKDLIAQLLVKDPTRRMGSK 406
+ +FP+ P P A L ++LL PT R+ +
Sbjct: 239 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL-TP 297
Query: 407 MGATAIKRHQFFN 419
+ A A H FF+
Sbjct: 298 LEACA---HSFFD 307
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 13/161 (8%)
Query: 136 EREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYAS 195
E + ++ +HP + AT ++T F G L +E A+ +
Sbjct: 76 ELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQ 135
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSD----- 250
V+ AL+++H MG ++R +K ++L+ DG + L+ +L + ++V D
Sbjct: 136 GVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYS 195
Query: 251 ------QSPPTGDQ--QPNDCAVDQPPFGNSSCIIPNCIVP 283
SP Q Q D D G ++C + N VP
Sbjct: 196 VKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 236
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 136 EREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYAS 195
E I+ DHP + L + + ++TE+ G L R+ D +F +
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF-LRKHDAQFTVIQLVGMLR 125
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++L MG ++RDL N+L+ S+ ++DF LS
Sbjct: 126 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 21/158 (13%)
Query: 89 RLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKES---RARIEREILEMLDH 145
++G G G V+ K++ G KV K+ L+ KE A E +IL++L H
Sbjct: 24 KIGQGTFGEVF----KARHRKTG----QKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 146 PFLPTLYA---TLDCPRWSC-----LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
+ L T P C L+ +FC DL L K F S ++ +
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVK-FTLSEIKRVMQML 133
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ L ++H I++RD+K NVL+ DG + L DF L+
Sbjct: 134 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 171
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 24/176 (13%)
Query: 79 LTLSDLRFVHRLGSGDIGSV---YLVQLKSKSSNNGCFFAAKVMD---KRELVSRNKESR 132
LTL D LGSG+ G+V Y K + + D K EL++
Sbjct: 12 LTLED----KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA------ 61
Query: 133 ARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRF 192
E +++ LD+P++ + + W L+ E G L+ + Q ++ + +
Sbjct: 62 ---EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIE 115
Query: 193 YASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTAQ 246
+V + +++L ++RDL NVL+ + + ++DF LS L+ D + AQ
Sbjct: 116 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 171
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
++ APE I+ + D W+ G+ ++E F YG P++G+
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 218
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 172 DLH-VLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLT 230
DLH ++ QP H VR++ +++ L+++H +I+RDLKP N+LV + + +
Sbjct: 145 DLHQIIHSSQPLTLEH---VRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIG 201
Query: 231 DFDLS 235
DF ++
Sbjct: 202 DFGMA 206
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 136 EREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYAS 195
E I+ DHP + L + + ++TE+ G L R+ D +F +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF-LRKHDAQFTVIQLVGMLR 154
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++L MG ++RDL N+L+ S+ ++DF LS
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 13/161 (8%)
Query: 136 EREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYAS 195
E + ++ +HP + AT ++T F G L +E A+ +
Sbjct: 60 ELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQ 119
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSD----- 250
V+ AL+++H MG ++R +K ++L+ DG + L+ +L + ++V D
Sbjct: 120 GVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYS 179
Query: 251 ------QSPPTGDQ--QPNDCAVDQPPFGNSSCIIPNCIVP 283
SP Q Q D D G ++C + N VP
Sbjct: 180 VKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 220
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 24/176 (13%)
Query: 79 LTLSDLRFVHRLGSGDIGSV---YLVQLKSKSSNNGCFFAAKVMD---KRELVSRNKESR 132
LTL D LGSG+ G+V Y K + + D K EL++
Sbjct: 18 LTLED----KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA------ 67
Query: 133 ARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRF 192
E +++ LD+P++ + + W L+ E G L+ + Q ++ + +
Sbjct: 68 ---EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIE 121
Query: 193 YASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTAQ 246
+V + +++L ++RDL NVL+ + + ++DF LS L+ D + AQ
Sbjct: 122 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 177
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
++ APE I+ + D W+ G+ ++E F YG P++G+
Sbjct: 185 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 224
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 136 EREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYAS 195
E I+ DHP + L + + ++TE+ G L R+ D +F +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF-LRKHDAQFTVIQLVGMLR 154
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++L MG ++RDL N+L+ S+ ++DF LS
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 136 EREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYAS 195
E I+ DHP + L + + ++TE+ G L R+ D +F +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF-LRKHDAQFTVIQLVGMLR 154
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++L MG ++RDL N+L+ S+ ++DF LS
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 78/168 (46%), Gaps = 19/168 (11%)
Query: 85 RFVHRLGSGDIGSVYLVQ---LKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI-- 139
+ V +LG G + +VYL + L K + F + +E+ R ERE+
Sbjct: 14 KIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPR---------EKEETLKRFEREVHN 64
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL-HVLRQRQPDKRFHESAVRFYASEVV 198
L H + ++ + L+ E+ G L + P ++A+ F ++++
Sbjct: 65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSV--DTAINF-TNQIL 121
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
++ H M I++RD+KP+N+L+ S+ + + DF ++ K + TS Q
Sbjct: 122 DGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIA-KALSETSLTQ 168
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTT 356
K+ + G + ++E ++ +GT +Y +PE GE D +++GI ++E+ G
Sbjct: 151 KIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEP 210
Query: 357 PFKG 360
PF G
Sbjct: 211 PFNG 214
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 14/167 (8%)
Query: 78 PLTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIER 137
P D ++ +G+G G ++ KS +G K +D + K+ E
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKS----DGKILVWKELDYGSMTEAEKQMLVS-EV 56
Query: 138 EILEMLDHPFLPTLY-ATLDCPRWSC-LLTEFCPGGDLHVLRQRQPDKR--FHESAVRFY 193
+L L HP + Y +D + ++ E+C GGDL + + +R E V
Sbjct: 57 NLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV 116
Query: 194 ASEVVVALEFLHMMG-----IIYRDLKPENVLVRSDGHIMLTDFDLS 235
+++ +AL+ H +++RDLKP NV + ++ L DF L+
Sbjct: 117 MTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTT 356
KLG+ G I+ D + FVGT Y++PE ++ + D W+LG ++EL
Sbjct: 156 KLGDFGLARILNHDEDF-AKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMP 214
Query: 357 PF 358
PF
Sbjct: 215 PF 216
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 136 EREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYAS 195
E I+ DHP + L + + ++TE+ G L R+ D +F +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF-LRKHDAQFTVIQLVGMLR 154
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++L MG ++RDL N+L+ S+ ++DF LS
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 24/176 (13%)
Query: 79 LTLSDLRFVHRLGSGDIGSV---YLVQLKSKSSNNGCFFAAKVMD---KRELVSRNKESR 132
LTL D LGSG+ G+V Y K + + D K EL++
Sbjct: 6 LTLED----KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA------ 55
Query: 133 ARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRF 192
E +++ LD+P++ + + W L+ E G L+ + Q ++ + +
Sbjct: 56 ---EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIE 109
Query: 193 YASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTAQ 246
+V + +++L ++RDL NVL+ + + ++DF LS L+ D + AQ
Sbjct: 110 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 165
Score = 32.0 bits (71), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
++ APE I+ + D W+ G+ ++E F YG P++G+
Sbjct: 173 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 212
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 136 EREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYAS 195
E I+ DHP + L + + ++TE+ G L R+ D +F +
Sbjct: 94 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF-LRKHDAQFTVIQLVGMLR 152
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++L MG ++RDL N+L+ S+ ++DF LS
Sbjct: 153 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 192
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 35 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 89
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 146
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 147 HSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT 185
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 41 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 95
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 96 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 152
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 153 HSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT 191
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 182 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 239
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 105 SKSSNNGCF---FAAKVMDKRELVS-----RNKESRARIEREILEMLDHPFLPTL----Y 152
+K NG F + AK+ D ELV+ ++K + R E +I+ LDH + L Y
Sbjct: 53 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-ELQIMRKLDHCNIVRLRYFFY 111
Query: 153 ATLDCPR--WSCLLTEFCPGGDLHVLRQRQPDKR-FHESAVRFYASEVVVALEFLHMMGI 209
++ + + L+ ++ P V R K+ V+ Y ++ +L ++H GI
Sbjct: 112 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 171
Query: 210 IYRDLKPENVLVRSDGHIM-LTDF 232
+RD+KP+N+L+ D ++ L DF
Sbjct: 172 CHRDIKPQNLLLDPDTAVLKLCDF 195
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 32/133 (24%)
Query: 315 SMSFVGTHEYLAPEIISGEG-HGNAVDWWTLGIFIFELFYGTTPF---KGIDHELTLANV 370
++S++ + Y APE+I G + +++D W+ G + EL G F G+D + + V
Sbjct: 207 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 266
Query: 371 VA--------------RALEFPK----------EPSVPGPAKDLIAQLLVKDPTRRMGSK 406
+ +FP+ P P A L ++LL PT R+ +
Sbjct: 267 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL-TP 325
Query: 407 MGATAIKRHQFFN 419
+ A A H FF+
Sbjct: 326 LEACA---HSFFD 335
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 105 SKSSNNGCF---FAAKVMDKRELVS-----RNKESRARIEREILEMLDHPFLPTL----Y 152
+K NG F + AK+ D ELV+ ++K + R E +I+ LDH + L Y
Sbjct: 63 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-ELQIMRKLDHCNIVRLRYFFY 121
Query: 153 ATLDCPR--WSCLLTEFCPGGDLHVLRQRQPDKR-FHESAVRFYASEVVVALEFLHMMGI 209
++ + + L+ ++ P V R K+ V+ Y ++ +L ++H GI
Sbjct: 122 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 181
Query: 210 IYRDLKPENVLVRSDGHIM-LTDF 232
+RD+KP+N+L+ D ++ L DF
Sbjct: 182 CHRDIKPQNLLLDPDTAVLKLCDF 205
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 32/133 (24%)
Query: 315 SMSFVGTHEYLAPEIISGEG-HGNAVDWWTLGIFIFELFYGTTPF---KGIDHELTLANV 370
++S++ + Y APE+I G + +++D W+ G + EL G F G+D + + V
Sbjct: 217 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 276
Query: 371 VA--------------RALEFPK----------EPSVPGPAKDLIAQLLVKDPTRRMGSK 406
+ +FP+ P P A L ++LL PT R+ +
Sbjct: 277 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL-TP 335
Query: 407 MGATAIKRHQFFN 419
+ A A H FF+
Sbjct: 336 LEACA---HSFFD 345
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 88 HRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPF 147
R+GSG G+VY K K + A K+++ + ++ + E +L H
Sbjct: 30 QRIGSGSFGTVY----KGKWHGD---VAVKMLNVTAPTPQQLQA-FKNEVGVLRKTRHVN 81
Query: 148 LPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRF-------YASEVVVA 200
+ P+ + ++T++C G L+ H S +F A +
Sbjct: 82 ILLFMGYSTAPQLA-IVTQWCEGSSLY--------HHLHASETKFEMKKLIDIARQTARG 132
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQL 247
+++LH II+RDLK N+ + D + + DF L+ + + + Q
Sbjct: 133 MDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 105 SKSSNNGCF---FAAKVMDKRELVS-----RNKESRARIEREILEMLDHPFLPTL----Y 152
+K NG F + AK+ D ELV+ ++K + R E +I+ LDH + L Y
Sbjct: 61 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-ELQIMRKLDHCNIVRLRYFFY 119
Query: 153 ATLDCPR--WSCLLTEFCPGGDLHVLRQRQPDKR-FHESAVRFYASEVVVALEFLHMMGI 209
++ + + L+ ++ P V R K+ V+ Y ++ +L ++H GI
Sbjct: 120 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 179
Query: 210 IYRDLKPENVLVRSDGHIM-LTDF 232
+RD+KP+N+L+ D ++ L DF
Sbjct: 180 CHRDIKPQNLLLDPDTAVLKLCDF 203
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 32/133 (24%)
Query: 315 SMSFVGTHEYLAPEIISGEG-HGNAVDWWTLGIFIFELFYGTTPF---KGIDHELTLANV 370
++S++ + Y APE+I G + +++D W+ G + EL G F G+D + + V
Sbjct: 215 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 274
Query: 371 VA--------------RALEFPK----------EPSVPGPAKDLIAQLLVKDPTRRMGSK 406
+ +FP+ P P A L ++LL PT R+ +
Sbjct: 275 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL-TP 333
Query: 407 MGATAIKRHQFFN 419
+ A A H FF+
Sbjct: 334 LEACA---HSFFD 343
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 105 SKSSNNGCF---FAAKVMDKRELVS-----RNKESRARIEREILEMLDHPFLPTL----Y 152
+K NG F + AK+ D ELV+ ++K + R E +I+ LDH + L Y
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-ELQIMRKLDHCNIVRLRYFFY 117
Query: 153 ATLDCPR--WSCLLTEFCPGGDLHVLRQRQPDKR-FHESAVRFYASEVVVALEFLHMMGI 209
++ + + L+ ++ P V R K+ V+ Y ++ +L ++H GI
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 177
Query: 210 IYRDLKPENVLVRSDGHIM-LTDF 232
+RD+KP+N+L+ D ++ L DF
Sbjct: 178 CHRDIKPQNLLLDPDTAVLKLCDF 201
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 32/133 (24%)
Query: 315 SMSFVGTHEYLAPEIISGEG-HGNAVDWWTLGIFIFELFYGTTPF---KGIDHELTLANV 370
++S++ + Y APE+I G + +++D W+ G + EL G F G+D + + V
Sbjct: 213 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 272
Query: 371 VA--------------RALEFPK----------EPSVPGPAKDLIAQLLVKDPTRRMGSK 406
+ +FP+ P P A L ++LL PT R+ +
Sbjct: 273 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL-TP 331
Query: 407 MGATAIKRHQFFN 419
+ A A H FF+
Sbjct: 332 LEACA---HSFFD 341
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 105 SKSSNNGCF---FAAKVMDKRELVS-----RNKESRARIEREILEMLDHPFLPTL----Y 152
+K NG F + AK+ D ELV+ ++K + R E +I+ LDH + L Y
Sbjct: 104 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-ELQIMRKLDHCNIVRLRYFFY 162
Query: 153 ATLDCPR--WSCLLTEFCPGGDLHVLRQRQPDKR-FHESAVRFYASEVVVALEFLHMMGI 209
++ + + L+ ++ P V R K+ V+ Y ++ +L ++H GI
Sbjct: 163 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 222
Query: 210 IYRDLKPENVLVRSDGHIM-LTDF 232
+RD+KP+N+L+ D ++ L DF
Sbjct: 223 CHRDIKPQNLLLDPDTAVLKLCDF 246
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 32/133 (24%)
Query: 315 SMSFVGTHEYLAPEIISGEG-HGNAVDWWTLGIFIFELFYGTTPF---KGIDHELTLANV 370
++S++ + Y APE+I G + +++D W+ G + EL G F G+D + + V
Sbjct: 258 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 317
Query: 371 VA--------------RALEFPK----------EPSVPGPAKDLIAQLLVKDPTRRMGSK 406
+ +FP+ P P A L ++LL PT R+ +
Sbjct: 318 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL-TP 376
Query: 407 MGATAIKRHQFFN 419
+ A A H FF+
Sbjct: 377 LEACA---HSFFD 386
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 105 SKSSNNGCF---FAAKVMDKRELVS-----RNKESRARIEREILEMLDHPFLPTL----Y 152
+K NG F + AK+ D ELV+ ++K + R E +I+ LDH + L Y
Sbjct: 30 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-ELQIMRKLDHCNIVRLRYFFY 88
Query: 153 ATLDCPR--WSCLLTEFCPGGDLHVLRQRQPDKR-FHESAVRFYASEVVVALEFLHMMGI 209
++ + + L+ ++ P V R K+ V+ Y ++ +L ++H GI
Sbjct: 89 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 148
Query: 210 IYRDLKPENVLVRSDGHIM-LTDF 232
+RD+KP+N+L+ D ++ L DF
Sbjct: 149 CHRDIKPQNLLLDPDTAVLKLCDF 172
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 32/133 (24%)
Query: 315 SMSFVGTHEYLAPEIISGEG-HGNAVDWWTLGIFIFELFYGTTPF---KGIDHELTLANV 370
++S++ + Y APE+I G + +++D W+ G + EL G F G+D + + V
Sbjct: 184 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 243
Query: 371 VA--------------RALEFPK----------EPSVPGPAKDLIAQLLVKDPTRRMGSK 406
+ +FP+ P P A L ++LL PT R+ +
Sbjct: 244 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL-TP 302
Query: 407 MGATAIKRHQFFN 419
+ A A H FF+
Sbjct: 303 LEACA---HSFFD 312
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 27 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 81
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 82 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 138
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 139 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 177
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 168 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 225
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 62/154 (40%), Gaps = 10/154 (6%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
S+L FV +GSG G V+L +K KV K E E E++
Sbjct: 27 SELTFVQEIGSGQFGLVHLGYWLNKD---------KVAIKTIKEGSMSEDDFIEEAEVMM 77
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
L HP L LY CL+ EF G L + Q F + +V +
Sbjct: 78 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGM 136
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+L +I+RDL N LV + I ++DF ++
Sbjct: 137 AYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT 170
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 24/176 (13%)
Query: 79 LTLSDLRFVHRLGSGDIGSV---YLVQLKSKSSNNGCFFAAKVMD---KRELVSRNKESR 132
LTL D LGSG+ G+V Y K + + D K EL++
Sbjct: 8 LTLED----KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLA------ 57
Query: 133 ARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRF 192
E +++ LD+P++ + + W L+ E G L+ + Q ++ + +
Sbjct: 58 ---EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIE 111
Query: 193 YASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTAQ 246
+V + +++L ++RDL NVL+ + + ++DF LS L+ D + AQ
Sbjct: 112 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 167
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
++ APE I+ + D W+ G+ ++E F YG P++G+
Sbjct: 175 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 214
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 13/125 (10%)
Query: 297 KLGNPGTPEIVAEPLDVRSMSFVGTHEYLAPEIISGE-GHGNAVDWWTLGIFIFELFYGT 355
KL + G +A P +V V T Y APE++ G+ +G AVD W +G + E+F G
Sbjct: 164 KLCDFGFARTLAAPGEVYDDE-VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
Query: 356 TPFKG---IDH----ELTLANVVARALE-FPKEPSVPGPAKDLIAQLLVKDPTRRMGSKM 407
F G ID + L N++ R E F K P G + ++ ++P R K+
Sbjct: 223 PLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVR---LPEIKEREPLERRYPKL 279
Query: 408 GATAI 412
I
Sbjct: 280 SEVVI 284
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 7/146 (4%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+G G G V +K ++ + G A K + + K+ R E ++L+ L H L
Sbjct: 33 VGEGSYGMV----MKCRNKDTGRIVAIKKFLESDDDKMVKKIAMR-EIKLLKQLRHENLV 87
Query: 150 TLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGI 209
L + L+ EF L L + P+ ++ V+ Y +++ + F H I
Sbjct: 88 NLLEVCKKKKRWYLVFEFVDHTILDDL-ELFPNGLDYQ-VVQKYLFQIINGIGFCHSHNI 145
Query: 210 IYRDLKPENVLVRSDGHIMLTDFDLS 235
I+RD+KPEN+LV G + L DF +
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFA 171
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 105 SKSSNNGCF---FAAKVMDKRELVS-----RNKESRARIEREILEMLDHPFLPTL----Y 152
+K NG F + AK+ D ELV+ ++K + R E +I+ LDH + L Y
Sbjct: 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-ELQIMRKLDHCNIVRLRYFFY 117
Query: 153 ATLDCPR--WSCLLTEFCPGGDLHVLRQRQPDKR-FHESAVRFYASEVVVALEFLHMMGI 209
++ + + L+ ++ P V R K+ V+ Y ++ +L ++H GI
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 177
Query: 210 IYRDLKPENVLVRSDGHIM-LTDF 232
+RD+KP+N+L+ D ++ L DF
Sbjct: 178 CHRDIKPQNLLLDPDTAVLKLCDF 201
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 32/133 (24%)
Query: 315 SMSFVGTHEYLAPEIISGEG-HGNAVDWWTLGIFIFELFYGTTPF---KGIDHELTLANV 370
++S + + Y APE+I G + +++D W+ G + EL G F G+D + + V
Sbjct: 213 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 272
Query: 371 VA--------------RALEFPK----------EPSVPGPAKDLIAQLLVKDPTRRMGSK 406
+ +FP+ P P A L ++LL PT R+ +
Sbjct: 273 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL-TP 331
Query: 407 MGATAIKRHQFFN 419
+ A A H FF+
Sbjct: 332 LEACA---HSFFD 341
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 28 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 82
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 83 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 139
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 140 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 178
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 169 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 226
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 26 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 80
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 137
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 176
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 66/167 (39%), Gaps = 7/167 (4%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L DL ++G G+ G V+ +L++ ++ V RE + + +++ E
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNT------LVAVKSCRETLPPDLKAKFLQEAR 164
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
IL+ HP + L + ++ E GGD R R + +
Sbjct: 165 ILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAA 223
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTA 245
+E+L I+RDL N LV + ++DF +S + + A
Sbjct: 224 AGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAA 270
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGIDHELTLANVVARALEFPKEP 381
++ APE ++ + + D W+ GI ++E F G +P+ + ++ T V + P
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT-REFVEKGGRLPCPE 338
Query: 382 SVPGPAKDLIAQLLVKDPTRR 402
P L+ Q +P +R
Sbjct: 339 LCPDAVFRLMEQCWAYEPGQR 359
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 30 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 141
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 314 RSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVAR 373
++ + +GT +YL+PE G+ D ++LG ++E+ G PF G D ++A R
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPDSVAYQHVR 233
Query: 374 ALEFPKEPSVPGPAKDL---IAQLLVKDPTRR--MGSKMGATAIKRHQFFNGVNWALLRC 428
P G + DL + + L K+P R ++M A ++ H NG
Sbjct: 234 EDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH---NG-------- 282
Query: 429 AKPPFIPRPVTCRDLTTTNSS 449
+PP P+ +T + T+ SS
Sbjct: 283 -EPPEAPKVLTDAERTSLLSS 302
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSL----KGDNSTSTAQLV 248
AL F H GII+RD+KP N+++ + + + DF ++ G++ T TA ++
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 105 SKSSNNGCF---FAAKVMDKRELVS-----RNKESRARIEREILEMLDHPFLPTL----Y 152
+K NG F + AK+ D ELV+ ++K + R E +I+ LDH + L Y
Sbjct: 38 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-ELQIMRKLDHCNIVRLRYFFY 96
Query: 153 ATLDCPR--WSCLLTEFCPGGDLHVLRQRQPDKR-FHESAVRFYASEVVVALEFLHMMGI 209
++ + + L+ ++ P V R K+ V+ Y ++ +L ++H GI
Sbjct: 97 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 156
Query: 210 IYRDLKPENVLVRSDGHIM-LTDF 232
+RD+KP+N+L+ D ++ L DF
Sbjct: 157 CHRDIKPQNLLLDPDTAVLKLCDF 180
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 32/133 (24%)
Query: 315 SMSFVGTHEYLAPEIISGEG-HGNAVDWWTLGIFIFELFYGTTPF---KGIDHELTLANV 370
++S++ + Y APE+I G + +++D W+ G + EL G F G+D + + V
Sbjct: 192 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 251
Query: 371 VA--------------RALEFPK----------EPSVPGPAKDLIAQLLVKDPTRRMGSK 406
+ +FP+ P P A L ++LL PT R+ +
Sbjct: 252 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL-TP 310
Query: 407 MGATAIKRHQFFN 419
+ A A H FF+
Sbjct: 311 LEACA---HSFFD 320
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 32 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 86
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 87 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 143
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 144 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 182
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRAR-IEREIL--EMLDHP 146
+G G G VY + + A +++D + R+ E + + +RE++ H
Sbjct: 41 IGKGRFGQVYHGRWHGE-------VAIRLID----IERDNEDQLKAFKREVMAYRQTRHE 89
Query: 147 FLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHM 206
+ P ++T C G L+ + R + R A E+V + +LH
Sbjct: 90 NVVLFMGACMSPPHLAIITSLCKGRTLYSV-VRDAKIVLDVNKTRQIAQEIVKGMGYLHA 148
Query: 207 MGIIYRDLKPENVLVRSDGHIMLTDFDL 234
GI+++DLK +NV +G +++TDF L
Sbjct: 149 KGILHKDLKSKNVFY-DNGKVVITDFGL 175
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 105 SKSSNNGCF---FAAKVMDKRELVS-----RNKESRARIEREILEMLDHPFLPTL----Y 152
+K NG F + AK+ D ELV+ ++K + R E +I+ LDH + L Y
Sbjct: 33 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-ELQIMRKLDHCNIVRLRYFFY 91
Query: 153 ATLDCPR--WSCLLTEFCPGGDLHVLRQRQPDKR-FHESAVRFYASEVVVALEFLHMMGI 209
++ + + L+ ++ P V R K+ V+ Y ++ +L ++H GI
Sbjct: 92 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 151
Query: 210 IYRDLKPENVLVRSDGHIM-LTDF 232
+RD+KP+N+L+ D ++ L DF
Sbjct: 152 CHRDIKPQNLLLDPDTAVLKLCDF 175
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 32/133 (24%)
Query: 315 SMSFVGTHEYLAPEIISGEG-HGNAVDWWTLGIFIFELFYGTTPF---KGIDHELTLANV 370
++S + + Y APE+I G + +++D W+ G + EL G F G+D + + V
Sbjct: 187 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 246
Query: 371 VA--------------RALEFPK----------EPSVPGPAKDLIAQLLVKDPTRRMGSK 406
+ +FP+ P P A L ++LL PT R+ +
Sbjct: 247 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL-TP 305
Query: 407 MGATAIKRHQFFN 419
+ A A H FF+
Sbjct: 306 LEACA---HSFFD 315
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 105 SKSSNNGCF---FAAKVMDKRELVS-----RNKESRARIEREILEMLDHPFLPTL----Y 152
+K NG F + AK+ D ELV+ ++K + R E +I+ LDH + L Y
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-ELQIMRKLDHCNIVRLRYFFY 95
Query: 153 ATLDCPR--WSCLLTEFCPGGDLHVLRQRQPDKR-FHESAVRFYASEVVVALEFLHMMGI 209
++ + + L+ ++ P V R K+ V+ Y ++ +L ++H GI
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 155
Query: 210 IYRDLKPENVLVRSDGHIM-LTDF 232
+RD+KP+N+L+ D ++ L DF
Sbjct: 156 CHRDIKPQNLLLDPDTAVLKLCDF 179
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 32/133 (24%)
Query: 315 SMSFVGTHEYLAPEIISGEG-HGNAVDWWTLGIFIFELFYGTTPF---KGIDHELTLANV 370
++S + + Y APE+I G + +++D W+ G + EL G F G+D + + V
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 250
Query: 371 VA--------------RALEFPK----------EPSVPGPAKDLIAQLLVKDPTRRMGSK 406
+ +FP+ P P A L ++LL PT R+ +
Sbjct: 251 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL-TP 309
Query: 407 MGATAIKRHQFFN 419
+ A A H FF+
Sbjct: 310 LEACA---HSFFD 319
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 27 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 81
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 82 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 138
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 139 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 177
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 168 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 30 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 141
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 105 SKSSNNGCF---FAAKVMDKRELVS-----RNKESRARIEREILEMLDHPFLPTL----Y 152
+K NG F + AK+ D ELV+ ++K + R E +I+ LDH + L Y
Sbjct: 44 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-ELQIMRKLDHCNIVRLRYFFY 102
Query: 153 ATLDCPR--WSCLLTEFCPGGDLHVLRQRQPDKR-FHESAVRFYASEVVVALEFLHMMGI 209
++ + + L+ ++ P V R K+ V+ Y ++ +L ++H GI
Sbjct: 103 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 162
Query: 210 IYRDLKPENVLVRSDGHIM-LTDF 232
+RD+KP+N+L+ D ++ L DF
Sbjct: 163 CHRDIKPQNLLLDPDTAVLKLCDF 186
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 32/133 (24%)
Query: 315 SMSFVGTHEYLAPEIISGEG-HGNAVDWWTLGIFIFELFYGTTPF---KGIDHELTLANV 370
++S + + Y APE+I G + +++D W+ G + EL G F G+D + + V
Sbjct: 198 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 257
Query: 371 VA--------------RALEFPK----------EPSVPGPAKDLIAQLLVKDPTRRMGSK 406
+ +FP+ P P A L ++LL PT R+ +
Sbjct: 258 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL-TP 316
Query: 407 MGATAIKRHQFFN 419
+ A A H FF+
Sbjct: 317 LEACA---HSFFD 326
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 32 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 86
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 87 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 143
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 144 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 182
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 105 SKSSNNGCF---FAAKVMDKRELVS-----RNKESRARIEREILEMLDHPFLPTL----Y 152
+K NG F + AK+ D ELV+ ++K + R E +I+ LDH + L Y
Sbjct: 37 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-ELQIMRKLDHCNIVRLRYFFY 95
Query: 153 ATLDCPR--WSCLLTEFCPGGDLHVLRQRQPDKR-FHESAVRFYASEVVVALEFLHMMGI 209
++ + + L+ ++ P V R K+ V+ Y ++ +L ++H GI
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 155
Query: 210 IYRDLKPENVLVRSDGHIM-LTDF 232
+RD+KP+N+L+ D ++ L DF
Sbjct: 156 CHRDIKPQNLLLDPDTAVLKLCDF 179
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 32/133 (24%)
Query: 315 SMSFVGTHEYLAPEIISGEG-HGNAVDWWTLGIFIFELFYGTTPF---KGIDHELTLANV 370
++S + + Y APE+I G + +++D W+ G + EL G F G+D + + V
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 250
Query: 371 VA--------------RALEFPK----------EPSVPGPAKDLIAQLLVKDPTRRMGSK 406
+ +FP+ P P A L ++LL PT R+ +
Sbjct: 251 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL-TP 309
Query: 407 MGATAIKRHQFFN 419
+ A A H FF+
Sbjct: 310 LEACA---HSFFD 319
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 50 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 104
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 105 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 161
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 162 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 200
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 191 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 49 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 103
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 104 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 160
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 161 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 199
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 190 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 247
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 7/148 (4%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARI--EREILEMLDHPF 147
+G+G+ G VY LK+ S A K + ++ R E I+ H
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLK----AGYTEKQRVDFLGEAGIMGQFSHHN 107
Query: 148 LPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMM 207
+ L + + ++TE+ G L R+ D F + + +++L M
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKF-LREKDGEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 208 GIIYRDLKPENVLVRSDGHIMLTDFDLS 235
++RDL N+LV S+ ++DF LS
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLS 194
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI-DHELTLANVVARALEFPKEP 381
+ APE IS +A D W+ GI ++E+ YG P+ + +HE+ A + P
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKA--INDGFRLPTPM 273
Query: 382 SVPGPAKDLIAQLLVKDPTRR 402
P L+ Q ++ RR
Sbjct: 274 DCPSAIYQLMMQCWQQERARR 294
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 35 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 89
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 146
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 147 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 185
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 23/164 (14%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDK--RELVSRNKESRARIEREILEMLDHPF 147
+GSG GSV + + G A K + K + ++ + R L +L H
Sbjct: 42 VGSGAYGSV----CAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRE------LRLLKHMK 91
Query: 148 LPTLYATLDCPRWSCLLTEF--------CPGGDLHVLRQRQPDKRFHESAVRFYASEVVV 199
+ LD + L EF G DL+ + + Q + + V+F +++
Sbjct: 92 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILR 148
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
L+++H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 149 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 192
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 240
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 29 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 83
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 84 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 140
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 141 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 179
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 170 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 227
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 30 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 141
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 65/167 (38%), Gaps = 46/167 (27%)
Query: 187 ESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
E V+ +++ +F+H GII+RDLKP N L+ D + + DF L+ + NS
Sbjct: 130 EQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLA-RTINSDKDIH 188
Query: 247 LVSDQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEI 306
+V+D +++P P + KK
Sbjct: 189 IVNDLEEKEENEEPG----------------------------PHNKNLKK--------- 211
Query: 307 VAEPLDVRSMSFVGTHEYLAPE-IISGEGHGNAVDWWTLGIFIFELF 352
+ S V T Y APE I+ E + N++D W+ G EL
Sbjct: 212 -------QLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 172 DLH-VLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLT 230
DLH ++ QP H VR++ +++ L+++H +I+RDLKP N+LV + + +
Sbjct: 144 DLHQIIHSSQPLTLEH---VRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIG 200
Query: 231 DFDLS 235
DF ++
Sbjct: 201 DFGMA 205
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 30 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 141
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 105 SKSSNNGCF---FAAKVMDKRELVS-----RNKESRARIEREILEMLDHPFLPTL----Y 152
+K NG F + AK+ D ELV+ ++K + R E +I+ LDH + L Y
Sbjct: 29 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-ELQIMRKLDHCNIVRLRYFFY 87
Query: 153 ATLDCPR--WSCLLTEFCPGGDLHVLRQRQPDKR-FHESAVRFYASEVVVALEFLHMMGI 209
++ + + L+ ++ P V R K+ V+ Y ++ +L ++H GI
Sbjct: 88 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 147
Query: 210 IYRDLKPENVLVRSDGHIM-LTDF 232
+RD+KP+N+L+ D ++ L DF
Sbjct: 148 CHRDIKPQNLLLDPDTAVLKLCDF 171
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 32/133 (24%)
Query: 315 SMSFVGTHEYLAPEIISGEG-HGNAVDWWTLGIFIFELFYGTTPF---KGIDHELTLANV 370
++S + + Y APE+I G + +++D W+ G + EL G F G+D + + V
Sbjct: 183 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 242
Query: 371 VA--------------RALEFPK----------EPSVPGPAKDLIAQLLVKDPTRRMGSK 406
+ +FP+ P P A L ++LL PT R+ +
Sbjct: 243 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL-TP 301
Query: 407 MGATAIKRHQFFN 419
+ A A H FF+
Sbjct: 302 LEACA---HSFFD 311
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 30 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 141
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 30 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 141
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 170 GGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIML 229
G DL+ + + Q + + V+F +++ L+++H II+RDLKP N+ V D + +
Sbjct: 120 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 176
Query: 230 TDFDLSLKGDNSTS 243
DF L+ D+ +
Sbjct: 177 LDFGLARHTDDEMT 190
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 181 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 238
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 30 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 141
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 30 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 141
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 319 VGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 63/157 (40%), Gaps = 7/157 (4%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L DL ++G G+ G V+ +L++ ++ V RE + + +++ E
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNT------LVAVKSCRETLPPDLKAKFLQEAR 164
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
IL+ HP + L + ++ E GGD R R + +
Sbjct: 165 ILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAA 223
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+E+L I+RDL N LV + ++DF +S
Sbjct: 224 AGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGIDHELTLANVVARALEFPKEP 381
++ APE ++ + + D W+ GI ++E F G +P+ + ++ T V + P
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT-REFVEKGGRLPCPE 338
Query: 382 SVPGPAKDLIAQLLVKDPTRR 402
P L+ Q +P +R
Sbjct: 339 LCPDAVFRLMEQCWAYEPGQR 359
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 37 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 91
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 92 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 148
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 187
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 178 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 105 SKSSNNGCF---FAAKVMDKRELVS-----RNKESRARIEREILEMLDHPFLPTL----Y 152
+K NG F + AK+ D ELV+ ++K + R E +I+ LDH + L Y
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-ELQIMRKLDHCNIVRLRYFFY 83
Query: 153 ATLDCPR--WSCLLTEFCPGGDLHVLRQRQPDKR-FHESAVRFYASEVVVALEFLHMMGI 209
++ + + L+ ++ P V R K+ V+ Y ++ +L ++H GI
Sbjct: 84 SSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 143
Query: 210 IYRDLKPENVLVRSDGHIM-LTDF 232
+RD+KP+N+L+ D ++ L DF
Sbjct: 144 CHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 32/133 (24%)
Query: 315 SMSFVGTHEYLAPEIISGEG-HGNAVDWWTLGIFIFELFYGTTPF---KGIDHELTLANV 370
++S + + Y APE+I G + +++D W+ G + EL G F G+D + + V
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 371 VA--------------RALEFPK----------EPSVPGPAKDLIAQLLVKDPTRRMGSK 406
+ +FP+ P P A L ++LL PT R+ +
Sbjct: 239 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL-TP 297
Query: 407 MGATAIKRHQFFN 419
+ A A H FF+
Sbjct: 298 LEACA---HSFFD 307
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 36 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 90
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 91 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 147
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 148 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 186
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 30 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 141
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 180
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 71/175 (40%), Gaps = 40/175 (22%)
Query: 88 HRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMD------KRELVSRNKESRARIERE--I 139
R+GSG G+VY K K + A K+++ ++ +N+ R R I
Sbjct: 30 QRIGSGSFGTVY----KGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 82
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRF------- 192
L + + P L ++T++C G L+ H S +F
Sbjct: 83 LLFMGYSTKPQL----------AIVTQWCEGSSLY--------HHLHASETKFEMKKLID 124
Query: 193 YASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQL 247
A + +++LH II+RDLK N+ + D + + DF L+ + + + Q
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQF 179
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 105 SKSSNNGCF---FAAKVMDKRELVS-----RNKESRARIEREILEMLDHPFLPTL----Y 152
+K NG F + AK+ D ELV+ ++K + R E +I+ LDH + L Y
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-ELQIMRKLDHCNIVRLRYFFY 83
Query: 153 ATLDCPR--WSCLLTEFCPGGDLHVLRQRQPDKR-FHESAVRFYASEVVVALEFLHMMGI 209
++ + + L+ ++ P V R K+ V+ Y ++ +L ++H GI
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 143
Query: 210 IYRDLKPENVLVRSDGHIM-LTDF 232
+RD+KP+N+L+ D ++ L DF
Sbjct: 144 CHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 32/133 (24%)
Query: 315 SMSFVGTHEYLAPEIISGEG-HGNAVDWWTLGIFIFELFYGTTPF---KGIDHELTLANV 370
++S + + Y APE+I G + +++D W+ G + EL G F G+D + + V
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 371 VA--------------RALEFPK----------EPSVPGPAKDLIAQLLVKDPTRRMGSK 406
+ +FP+ P P A L ++LL PT R+ +
Sbjct: 239 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL-TP 297
Query: 407 MGATAIKRHQFFN 419
+ A A H FF+
Sbjct: 298 LEACA---HSFFD 307
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 105 SKSSNNGCF---FAAKVMDKRELVS-----RNKESRARIEREILEMLDHPFLPTL----Y 152
+K NG F + AK+ D ELV+ ++K + R E +I+ LDH + L Y
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-ELQIMRKLDHCNIVRLRYFFY 83
Query: 153 ATLDCPR--WSCLLTEFCPGGDLHVLRQRQPDKR-FHESAVRFYASEVVVALEFLHMMGI 209
++ + + L+ ++ P V R K+ V+ Y ++ +L ++H GI
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 143
Query: 210 IYRDLKPENVLVRSDGHIM-LTDF 232
+RD+KP+N+L+ D ++ L DF
Sbjct: 144 CHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 32/133 (24%)
Query: 315 SMSFVGTHEYLAPEIISGEG-HGNAVDWWTLGIFIFELFYGTTPF---KGIDHELTLANV 370
++S++ + Y APE+I G + +++D W+ G + EL G F G+D + + V
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 371 VA--------------RALEFPK----------EPSVPGPAKDLIAQLLVKDPTRRMGSK 406
+ +FP+ P P A L ++LL PT R+ +
Sbjct: 239 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL-TP 297
Query: 407 MGATAIKRHQFFN 419
+ A A H FF+
Sbjct: 298 LEACA---HSFFD 307
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 32 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 86
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 87 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 143
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 144 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 182
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 230
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 164 LTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRS 223
L G DL+ + + Q + + V+F +++ L+++H II+RDLKP N+ V
Sbjct: 100 LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 156
Query: 224 DGHIMLTDFDLSLKGDNSTS 243
D + + DF L+ D+ +
Sbjct: 157 DCELKILDFGLARHTDDEMT 176
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 105 SKSSNNGCF---FAAKVMDKRELVS-----RNKESRARIEREILEMLDHPFLPTL----Y 152
+K NG F + AK+ D ELV+ ++K + R E +I+ LDH + L Y
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-ELQIMRKLDHCNIVRLRYFFY 83
Query: 153 ATLDCPR--WSCLLTEFCPGGDLHVLRQRQPDKR-FHESAVRFYASEVVVALEFLHMMGI 209
++ + + L+ ++ P V R K+ V+ Y ++ +L ++H GI
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 143
Query: 210 IYRDLKPENVLVRSDGHIM-LTDF 232
+RD+KP+N+L+ D ++ L DF
Sbjct: 144 CHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 32/133 (24%)
Query: 315 SMSFVGTHEYLAPEIISGEG-HGNAVDWWTLGIFIFELFYGTTPF---KGIDHELTLANV 370
++S + + Y APE+I G + +++D W+ G + EL G F G+D + + V
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 238
Query: 371 VA--------------RALEFPK----------EPSVPGPAKDLIAQLLVKDPTRRMGSK 406
+ +FP+ P P A L ++LL PT R+ +
Sbjct: 239 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL-TP 297
Query: 407 MGATAIKRHQFFN 419
+ A A H FF+
Sbjct: 298 LEACA---HSFFD 307
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 170 GGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIML 229
G DL+ + + Q + + V+F +++ L+++H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 230 TDFDLSLKGDNSTS 243
DF L+ D+ +
Sbjct: 167 LDFGLARHTDDEMT 180
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 35 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 89
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 146
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 147 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 185
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 233
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 170 GGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIML 229
G DL+ + + Q + + V+F +++ L+++H II+RDLKP N+ V D + +
Sbjct: 121 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 177
Query: 230 TDFDLSLKGDNSTS 243
DF L+ D+ +
Sbjct: 178 LDFGLARHTDDEMT 191
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 182 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 239
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 42 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 96
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 97 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 153
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 154 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 192
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 240
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 65/167 (38%), Gaps = 17/167 (10%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSK-SSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
D+ LG G G V+L + + + A K + + +R R E E+L
Sbjct: 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR---EAELLT 98
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLH-VLRQRQPDKRFHESA----------- 189
ML H + + R ++ E+ GDL+ LR PD +
Sbjct: 99 MLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 158
Query: 190 -VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ AS+V + +L + ++RDL N LV + + DF +S
Sbjct: 159 QLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 205
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 53 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 107
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 108 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 164
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 165 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 203
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 194 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 251
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 42 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 96
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 97 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 153
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 154 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 192
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 240
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 164 LTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRS 223
L G DL+ + + Q + + V+F +++ L+++H II+RDLKP N+ V
Sbjct: 100 LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 156
Query: 224 DGHIMLTDFDLSLKGDNSTS 243
D + + DF L+ D+ +
Sbjct: 157 DCELKILDFGLARHTDDEMA 176
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D FV T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 167 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 170 GGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIML 229
G DL+ + + Q + + V+F +++ L+++H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 230 TDFDLSLKGDNSTS 243
DF L+ D+ +
Sbjct: 167 LDFGLARHTDDEMA 180
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D FV T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 171 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 36 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 90
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 91 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 147
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 148 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 186
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
++ + ++GSG+ GSV+ K +GC +A K K+ L E A E
Sbjct: 9 TEFHELEKIGSGEFGSVF----KCVKRLDGCIYAIK-RSKKPLAGSVDEQNALREVYAHA 63
Query: 142 ML-DHPFLPTLYATLDCPRWSCLLTEFCPGGDLH--VLRQRQPDKRFHESAVRFYASEVV 198
+L H + ++ + E+C GG L + + F E+ ++ +V
Sbjct: 64 VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 123
Query: 199 VALEFLHMMGIIYRDLKPENVLV 221
L ++H M +++ D+KP N+ +
Sbjct: 124 RGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 164 LTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRS 223
L G DL+ + + Q + + V+F +++ L+++H II+RDLKP N+ V
Sbjct: 123 LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 179
Query: 224 DGHIMLTDFDLSLKGDNSTS 243
D + + DF L+ D+ +
Sbjct: 180 DCELKILDFGLARHTDDEMT 199
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 190 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 247
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%), Gaps = 17/144 (11%)
Query: 105 SKSSNNGCF---FAAKVMDKRELVS-----RNKESRARIEREILEMLDHPFLPTL----Y 152
+K NG F + AK+ D ELV+ ++K + R E +I+ LDH + L Y
Sbjct: 26 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-ELQIMRKLDHCNIVRLRYFFY 84
Query: 153 ATLDCPR--WSCLLTEFCPGGDLHVLRQRQPDKR-FHESAVRFYASEVVVALEFLHMMGI 209
++ + + L+ ++ P V R K+ V+ Y ++ +L ++H GI
Sbjct: 85 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI 144
Query: 210 IYRDLKPENVLVRSDGHIM-LTDF 232
+RD+KP+N+L+ D ++ L DF
Sbjct: 145 CHRDIKPQNLLLDPDTAVLKLCDF 168
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 32/133 (24%)
Query: 315 SMSFVGTHEYLAPEIISGEG-HGNAVDWWTLGIFIFELFYGTTPF---KGIDHELTLANV 370
++S + + Y APE+I G + +++D W+ G + EL G F G+D + + V
Sbjct: 180 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 239
Query: 371 VA--------------RALEFPK----------EPSVPGPAKDLIAQLLVKDPTRRMGSK 406
+ +FP+ P P A L ++LL PT R+ +
Sbjct: 240 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL-TP 298
Query: 407 MGATAIKRHQFFN 419
+ A A H FF+
Sbjct: 299 LEACA---HSFFD 308
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 4/165 (2%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
+ +S ++ +G+G+ G V LK F A K + + ++ + E
Sbjct: 4 IDISCVKIEQVIGAGEFGEVCSGHLKLPGKRE-IFVAIKTLKSGYTEKQRRDFLS--EAS 60
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
I+ DHP + L + ++TEF G L RQ D +F + +
Sbjct: 61 IMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL-RQNDGQFTVIQLVGMLRGIA 119
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
+++L M ++R L N+LV S+ ++DF LS ++ TS
Sbjct: 120 AGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTS 164
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGIDHELTLANVVARALEFPKEPS 382
+ APE I +A D W+ GI ++E+ YG P+ + ++ + N + + P
Sbjct: 180 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ-DVINAIEQDYRLPPPMD 238
Query: 383 VPGPAKDLIAQLLVKDPTRR 402
P L+ KD R
Sbjct: 239 CPSALHQLMLDCWQKDRNHR 258
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 170 GGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIML 229
G DL+ + + Q + + V+F +++ L+++H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 230 TDFDLSLKGDNSTS 243
DF L+ D+ +
Sbjct: 167 LDFGLARHTDDEMA 180
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D FV T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 171 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 90 LGSGDIGSVY--LVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPF 147
LG G+ GSV + +++ K + A KV+ K+ + E R E +I+ LD+P+
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQID----VAIKVL-KQGTEKADTEEMMR-EAQIMHQLDNPY 71
Query: 148 LPTLYATLDCPRWSCLLTEFCPGGDLHVL----RQRQPDKRFHESAVRFYASEVVVALEF 203
+ L L+ E GG LH R+ P S V +V + +++
Sbjct: 72 IVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIP-----VSNVAELLHQVSMGMKY 125
Query: 204 LHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTAQ 246
L ++RDL NVL+ + + ++DF LS L D+S TA+
Sbjct: 126 LEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 170
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 164 LTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRS 223
L G DL+ + + Q + + V+F +++ L+++H II+RDLKP N+ V
Sbjct: 124 LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 180
Query: 224 DGHIMLTDFDLSLKGDNSTS 243
D + + DF L+ D+ +
Sbjct: 181 DCELKILDFGLARHTDDEMT 200
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 191 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 61/138 (44%), Gaps = 8/138 (5%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML-DH 145
+ ++GSG+ GSV+ K +GC +A K K+ L E A E +L H
Sbjct: 16 LEKIGSGEFGSVF----KCVKRLDGCIYAIK-RSKKPLAGSVDEQNALREVYAHAVLGQH 70
Query: 146 PFLPTLYATLDCPRWSCLLTEFCPGGDLH--VLRQRQPDKRFHESAVRFYASEVVVALEF 203
+ ++ + E+C GG L + + F E+ ++ +V L +
Sbjct: 71 SHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRY 130
Query: 204 LHMMGIIYRDLKPENVLV 221
+H M +++ D+KP N+ +
Sbjct: 131 IHSMSLVHMDIKPSNIFI 148
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 136 EREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYAS 195
E I+ DHP + L + + ++TE+ G L ++ D +F +
Sbjct: 73 EASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKN-DGQFTVIQLVGMLR 131
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++L MG ++RDL N+L+ S+ ++DF LS
Sbjct: 132 GISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 171
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 319 VGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH 363
V T Y APE+I G G+ VD W++G + E+ G F G DH
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 230
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNS 241
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+ S
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 65/160 (40%), Gaps = 30/160 (18%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ ++G G G VY Q +N G FA K + + E S E IL+ L H
Sbjct: 7 LEKIGEGTYGVVYKAQ-----NNYGETFALKKI-RLEKEDEGIPSTTIREISILKELKHS 60
Query: 147 FLPTLYATLDCPRWSCL-----------LTEFCPGGDLHVLRQRQPDKRFHESAVRFYAS 195
+ LY + + L L + C GG + +
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-------------LESVTAKSFLL 107
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+++ + + H +++RDLKP+N+L+ +G + + DF L+
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 51/136 (37%), Gaps = 39/136 (28%)
Query: 321 THE-----YLAPEIISG-EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARA 374
THE Y AP+++ G + + +D W++G E+ GT F G+ L + R
Sbjct: 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIF-RI 216
Query: 375 LEFPKEPSVPGPAK----------------------------DLIAQLLVKDPTRRMGSK 406
L P + P + DL++++L DP +R+ +K
Sbjct: 217 LGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAK 276
Query: 407 MGATAIKRHQFFNGVN 422
H +F N
Sbjct: 277 QAL----EHAYFKENN 288
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 65/160 (40%), Gaps = 30/160 (18%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ ++G G G VY Q +N G FA K + + E S E IL+ L H
Sbjct: 7 LEKIGEGTYGVVYKAQ-----NNYGETFALKKI-RLEKEDEGIPSTTIREISILKELKHS 60
Query: 147 FLPTLYATLDCPRWSCL-----------LTEFCPGGDLHVLRQRQPDKRFHESAVRFYAS 195
+ LY + + L L + C GG + +
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-------------LESVTAKSFLL 107
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+++ + + H +++RDLKP+N+L+ +G + + DF L+
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 65/160 (40%), Gaps = 30/160 (18%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHP 146
+ ++G G G VY Q +N G FA K + + E S E IL+ L H
Sbjct: 7 LEKIGEGTYGVVYKAQ-----NNYGETFALKKI-RLEKEDEGIPSTTIREISILKELKHS 60
Query: 147 FLPTLYATLDCPRWSCL-----------LTEFCPGGDLHVLRQRQPDKRFHESAVRFYAS 195
+ LY + + L L + C GG + +
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG-------------LESVTAKSFLL 107
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+++ + + H +++RDLKP+N+L+ +G + + DF L+
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 51/136 (37%), Gaps = 39/136 (28%)
Query: 321 THE-----YLAPEIISG-EGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARA 374
THE Y AP+++ G + + +D W++G E+ GT F G+ L + R
Sbjct: 158 THEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIF-RI 216
Query: 375 LEFPKEPSVPGPAK----------------------------DLIAQLLVKDPTRRMGSK 406
L P + P + DL++++L DP +R+ +K
Sbjct: 217 LGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAK 276
Query: 407 MGATAIKRHQFFNGVN 422
H +F N
Sbjct: 277 QAL----EHAYFKENN 288
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
++ + ++GSG+ GSV+ K +GC +A K K+ L E A E
Sbjct: 9 TEFHELEKIGSGEFGSVF----KCVKRLDGCIYAIK-RSKKPLAGSVDEQNALREVYAHA 63
Query: 142 ML-DHPFLPTLYATLDCPRWSCLLTEFCPGGDLH--VLRQRQPDKRFHESAVRFYASEVV 198
+L H + ++ + E+C GG L + + F E+ ++ +V
Sbjct: 64 VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 123
Query: 199 VALEFLHMMGIIYRDLKPENVLV 221
L ++H M +++ D+KP N+ +
Sbjct: 124 RGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 164 LTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRS 223
L G DL+ + + Q + + V+F +++ L+++H II+RDLKP N+ V
Sbjct: 110 LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 166
Query: 224 DGHIMLTDFDLSLKGDNSTS 243
D + + DF L+ D+ +
Sbjct: 167 DCELKILDFGLARHTDDEMT 186
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 234
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 136 EREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYAS 195
E I+ DHP + L + + ++TE+ G L R+ D +F +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF-LRKHDAQFTVIQLVGMLR 154
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++L MG ++RDL N+L+ S+ ++DF L+
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLA 194
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+++ ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 40/127 (31%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH-------------- 363
+V T Y APE+I G G+ VD W++G + E+ F G D+
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 282
Query: 364 --------ELTLANVVAR-----ALEFPK---EPSVPG----------PAKDLIAQLLVK 397
+ T+ N V L FPK + P A+DL++++LV
Sbjct: 283 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 342
Query: 398 DPTRRMG 404
DP +R+
Sbjct: 343 DPAKRIS 349
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 61/138 (44%), Gaps = 8/138 (5%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML-DH 145
+ ++GSG+ GSV+ K +GC +A K K+ L E A E +L H
Sbjct: 12 LEKIGSGEFGSVF----KCVKRLDGCIYAIK-RSKKPLAGSVDEQNALREVYAHAVLGQH 66
Query: 146 PFLPTLYATLDCPRWSCLLTEFCPGGDLH--VLRQRQPDKRFHESAVRFYASEVVVALEF 203
+ ++ + E+C GG L + + F E+ ++ +V L +
Sbjct: 67 SHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRY 126
Query: 204 LHMMGIIYRDLKPENVLV 221
+H M +++ D+KP N+ +
Sbjct: 127 IHSMSLVHMDIKPSNIFI 144
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 7/154 (4%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
L+ + LG G G V L + G A K + + S + E +IL L
Sbjct: 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--KADAGPQHRSGWKQEIDILRTL 90
Query: 144 DHPFLPTLYATLDCPRWSCL--LTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
H + + + L + E+ P G L R P + + +A ++ +
Sbjct: 91 YHEHIIKYKGCCEDAGAASLQLVMEYVPLGSL---RDYLPRHSIGLAQLLLFAQQICEGM 147
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+LH I+RDL NVL+ +D + + DF L+
Sbjct: 148 AYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLA 181
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 123 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 166
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 40/127 (31%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH-------------- 363
+V T Y APE+I G G+ VD W++G + E+ F G D+
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237
Query: 364 --------ELTLANVVAR-----ALEFPK---EPSVPG----------PAKDLIAQLLVK 397
+ T+ N V L FPK + P A+DL++++LV
Sbjct: 238 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 297
Query: 398 DPTRRMG 404
DP +R+
Sbjct: 298 DPAKRIS 304
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 170 GGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIML 229
G DL+ + + Q + + V+F +++ L+++H II+RDLKP N+ V D + +
Sbjct: 133 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 189
Query: 230 TDFDLSLKGDN 240
DF L+ D+
Sbjct: 190 LDFGLARHTDD 200
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 194 LARHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 251
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 314 RSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVAR 373
++ + +GT +YL+PE G+ D ++LG ++E+ G PF G D +++A R
Sbjct: 192 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG-DSPVSVAYQHVR 250
Query: 374 ALEFPKEPSVPGPAKDL---IAQLLVKDPTRR--MGSKMGATAIKRHQ 416
P G + DL + + L K+P R ++M A ++ H
Sbjct: 251 EDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 298
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 200 ALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSL----KGDNSTSTAQLVSDQSPPT 255
AL F H GII+RD+KP N+++ + + + DF ++ G++ T TA ++ +
Sbjct: 145 ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 204
Query: 256 GDQQPNDCAVDQPPFGNSSCII 277
+Q D + + C++
Sbjct: 205 PEQARGDSVDARSDVYSLGCVL 226
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 40/127 (31%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH-------------- 363
+V T Y APE+I G G+ VD W++G + E+ F G D+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 364 --------ELTLANVVAR-----ALEFPK---EPSVPG----------PAKDLIAQLLVK 397
+ T+ N V L FPK + P A+DL++++LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 398 DPTRRMG 404
DP +R+
Sbjct: 305 DPAKRIS 311
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 40/127 (31%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH-------------- 363
+V T Y APE+I G G+ VD W++G + E+ F G D+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 364 --------ELTLANVVAR-----ALEFPK---EPSVPG----------PAKDLIAQLLVK 397
+ T+ N V L FPK + P A+DL++++LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 398 DPTRRMG 404
DP +R+
Sbjct: 305 DPAKRIS 311
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARI-ER 137
L S ++ +G+G+ G V +LK + A + ++ K+ R + E
Sbjct: 40 LDASCIKIERVIGAGEFGEVCSGRLKLPGKRD----VAVAIKTLKVGYTEKQRRDFLCEA 95
Query: 138 EILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
I+ DHP + L + + ++ EF G L R+ D +F + +
Sbjct: 96 SIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAF-LRKHDGQFTVIQLVGMLRGI 154
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +L MG ++RDL N+LV S+ ++DF LS
Sbjct: 155 AAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLS 192
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 164 LTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRS 223
L G DL+ + + Q + + V+F +++ L+++H II+RDLKP N+ V
Sbjct: 124 LVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 180
Query: 224 DGHIMLTDFDLSLKGDN 240
D + + DF L+ D+
Sbjct: 181 DCELKILDFGLARHTDD 197
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 319 VGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 170 GGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIML 229
G DL+ + + Q + + V+F +++ L+++H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 230 TDFDLSLKGDNSTS 243
DF L+ D+ +
Sbjct: 167 LDFYLARHTDDEMT 180
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+++ ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 40/127 (31%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH-------------- 363
+V T Y APE+I G G+ VD W++G + E+ F G D+
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 282
Query: 364 --------ELTLANVVAR-----ALEFPK---EPSVPG----------PAKDLIAQLLVK 397
+ T+ N V L FPK + P A+DL++++LV
Sbjct: 283 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 342
Query: 398 DPTRRMG 404
DP +R+
Sbjct: 343 DPAKRIS 349
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 40/163 (24%)
Query: 88 HRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMD------KRELVSRNKESRARIERE--I 139
R+GSG G+VY K K + A K+++ ++ +N+ R R I
Sbjct: 18 QRIGSGSFGTVY----KGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 70
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRF------- 192
L + + P L ++T++C G L+ H S +F
Sbjct: 71 LLFMGYSTKPQL----------AIVTQWCEGSSLY--------HHLHASETKFEMKKLID 112
Query: 193 YASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
A + +++LH II+RDLK N+ + D + + DF L+
Sbjct: 113 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 155
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 14/152 (9%)
Query: 87 VHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI---LEML 143
+ RLG G G V+ K +S +G +A K + R + RAR E+ ++
Sbjct: 62 LSRLGHGSYGEVF----KVRSKEDGRLYAVK---RSMSPFRGPKDRARKLAEVGSHEKVG 114
Query: 144 DHPFLPTLYATLDCPRWSCLLTEFC-PGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
HP L + L TE C P H E+ V Y + ++AL
Sbjct: 115 QHPCCVRLEQAWEEGGILYLQTELCGPSLQQHC---EAWGASLPEAQVWGYLRDTLLALA 171
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDL 234
LH G+++ D+KP N+ + G L DF L
Sbjct: 172 HLHSQGLVHLDVKPANIFLGPRGRCKLGDFGL 203
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 65/167 (38%), Gaps = 17/167 (10%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSK-SSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
D+ LG G G V+L + + + A K + + +R R E E+L
Sbjct: 13 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR---EAELLT 69
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLH-VLRQRQPDKRFHESA----------- 189
ML H + + R ++ E+ GDL+ LR PD +
Sbjct: 70 MLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 129
Query: 190 -VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ AS+V + +L + ++RDL N LV + + DF +S
Sbjct: 130 QLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 176
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 19/172 (11%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQL--KSKSSNNGCFFAAKVMDKRELVSRNKESRARIE 136
++LS +RF+ LG G VY L + + DK E R + R E
Sbjct: 6 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREE---FRHE 62
Query: 137 REILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLH-VLRQRQP--------DKRFHE 187
+ L HP + L + + ++ +C GDLH L R P D R +
Sbjct: 63 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 122
Query: 188 SAVR-----FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDL 234
SA+ +++ +E+L ++++DL NVLV ++ ++D L
Sbjct: 123 SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL 174
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 40/127 (31%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH-------------- 363
+V T Y APE+I G G+ VD W++G + E+ F G D+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 364 --------ELTLANVVAR-----ALEFPK---EPSVPG----------PAKDLIAQLLVK 397
+ T+ N V L FPK + P A+DL++++LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 398 DPTRRMG 404
DP +R+
Sbjct: 305 DPAKRIS 311
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 135 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 178
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH 363
+V T Y APE+I G G+ VD W++G + E+ F G D+
Sbjct: 190 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDY 235
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 319 VGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH 363
V T Y APE+I G G+ VD W++G + E+ F G D+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDY 230
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 40/127 (31%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH-------------- 363
+V T Y APE+I G G+ VD W++G + E+ F G D+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 364 --------ELTLANVVAR-----ALEFPK---EPSVPG----------PAKDLIAQLLVK 397
+ T+ N V L FPK + P A+DL++++LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 398 DPTRRMG 404
DP +R+
Sbjct: 305 DPAKRIS 311
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 319 VGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH 363
V T Y APE+I G G+ VD W++G + E+ F G D+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDY 230
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 19/172 (11%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQL--KSKSSNNGCFFAAKVMDKRELVSRNKESRARIE 136
++LS +RF+ LG G VY L + + DK E R + R E
Sbjct: 23 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREE---FRHE 79
Query: 137 REILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLH-VLRQRQP--------DKRFHE 187
+ L HP + L + + ++ +C GDLH L R P D R +
Sbjct: 80 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 139
Query: 188 SAVR-----FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDL 234
SA+ +++ +E+L ++++DL NVLV ++ ++D L
Sbjct: 140 SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL 191
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 129 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 172
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 40/127 (31%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH-------------- 363
+V T Y APE+I G G+ VD W++G + E+ F G D+
Sbjct: 184 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 243
Query: 364 --------ELTLANVVAR-----ALEFPK---EPSVPG----------PAKDLIAQLLVK 397
+ T+ N V L FPK + P A+DL++++LV
Sbjct: 244 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 303
Query: 398 DPTRRMG 404
DP +R+
Sbjct: 304 DPAKRIS 310
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNS 241
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+ S
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 173
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 40/127 (31%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH-------------- 363
+V T Y APE+I G G+ VD W++G + E+ F G D+
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 238
Query: 364 --------ELTLANVVAR-----ALEFPK---EPSVPG----------PAKDLIAQLLVK 397
+ T+ N V L FPK + P A+DL++++LV
Sbjct: 239 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 298
Query: 398 DPTRRMG 404
DP +R+
Sbjct: 299 DPAKRIS 305
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 40/127 (31%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH-------------- 363
+V T Y APE+I G G+ VD W++G + E+ F G D+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 364 --------ELTLANVVAR-----ALEFPK---EPSVPG----------PAKDLIAQLLVK 397
+ T+ N V L FPK + P A+DL++++LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 398 DPTRRMG 404
DP +R+
Sbjct: 305 DPAKRIS 311
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 136 EREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYAS 195
E I+ DHP + L + + ++TE+ G L R+ D +F +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF-LRKHDAQFTVIQLVGMLR 154
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDL 234
+ +++L MG ++RDL N+L+ S+ ++DF L
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 40/127 (31%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH-------------- 363
+V T Y APE+I G G+ VD W++G + E+ F G D+
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 245
Query: 364 --------ELTLANVVAR-----ALEFPK---EPSVPG----------PAKDLIAQLLVK 397
+ T+ N V L FPK + P A+DL++++LV
Sbjct: 246 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 305
Query: 398 DPTRRMG 404
DP +R+
Sbjct: 306 DPAKRIS 312
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 65/167 (38%), Gaps = 17/167 (10%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSK-SSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
D+ LG G G V+L + + + A K + + +R R E E+L
Sbjct: 19 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR---EAELLT 75
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLH-VLRQRQPDKRFHESA----------- 189
ML H + + R ++ E+ GDL+ LR PD +
Sbjct: 76 MLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLG 135
Query: 190 -VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ AS+V + +L + ++RDL N LV + + DF +S
Sbjct: 136 QLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 182
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNS 241
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+ S
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 173
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH 363
+V T Y APE+I G G+ VD W++G + E+ F G D+
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDY 224
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 40/127 (31%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH-------------- 363
+V T Y APE+I G G+ VD W++G + E+ F G D+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 364 --------ELTLANVVAR-----ALEFPK---EPSVPG----------PAKDLIAQLLVK 397
+ T+ N V L FPK + P A+DL++++LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 398 DPTRRMG 404
DP +R+
Sbjct: 305 DPAKRIS 311
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 40/127 (31%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH-------------- 363
+V T Y APE+I G G+ VD W++G + E+ F G D+
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 245
Query: 364 --------ELTLANVVAR-----ALEFPK---EPSVPG----------PAKDLIAQLLVK 397
+ T+ N V L FPK + P A+DL++++LV
Sbjct: 246 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 305
Query: 398 DPTRRMG 404
DP +R+
Sbjct: 306 DPAKRIS 312
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 162 CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV 221
L+ E+ D L Q D +RFY E++ AL++ H GI++RD+KP NV++
Sbjct: 111 ALVFEYINNTDFKQLYQILTD-----FDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 165
Query: 222 -RSDGHIMLTDFDLS 235
+ L D+ L+
Sbjct: 166 DHQQKKLRLIDWGLA 180
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNS 241
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+ S
Sbjct: 123 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 172
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 40/127 (31%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH-------------- 363
+V T Y APE+I G G+ VD W++G + E+ F G D+
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237
Query: 364 --------ELTLANVVAR-----ALEFPK---EPSVPG----------PAKDLIAQLLVK 397
+ T+ N V L FPK + P A+DL++++LV
Sbjct: 238 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 297
Query: 398 DPTRRMG 404
DP +R+
Sbjct: 298 DPAKRIS 304
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++ ++ LH GII+RDLKP N++V+SD + + DF L+
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 40/127 (31%)
Query: 318 FVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDH-------------- 363
+V T Y APE+I G G+ VD W++G + E+ F G D+
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 238
Query: 364 --------ELTLANVVAR-----ALEFPK---EPSVPG----------PAKDLIAQLLVK 397
+ T+ N V L FPK + P A+DL++++LV
Sbjct: 239 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 298
Query: 398 DPTRRMG 404
DP +R+
Sbjct: 299 DPAKRIS 305
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 16/152 (10%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCF----FAAKVMDK--RELVSRNKESRARIEREILEML 143
+G G+ G V +LK C A DK R+ +S E I+
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS---------EASIMGQF 87
Query: 144 DHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEF 203
DHP + L + + ++TE+ G L R+ D RF + + +++
Sbjct: 88 DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAF-LRKNDGRFTVIQLVGMLRGIGSGMKY 146
Query: 204 LHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
L M ++RDL N+LV S+ ++DF +S
Sbjct: 147 LSDMSAVHRDLAARNILVNSNLVCKVSDFGMS 178
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 184 RFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
+ + V+F +++ L+++H II+RDLKP N+ V D + + DF L+ D+ +
Sbjct: 117 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT 176
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 162 CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV 221
L+ E+ D L Q D +RFY E++ AL++ H GI++RD+KP NV++
Sbjct: 116 ALVFEYINNTDFKQLYQILTD-----FDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 170
Query: 222 -RSDGHIMLTDFDLS 235
+ L D+ L+
Sbjct: 171 DHQQKKLRLIDWGLA 185
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 16/152 (10%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCF----FAAKVMDK--RELVSRNKESRARIEREILEML 143
+G G+ G V +LK C A DK R+ +S E I+
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS---------EASIMGQF 72
Query: 144 DHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEF 203
DHP + L + + ++TE+ G L R+ D RF + + +++
Sbjct: 73 DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAF-LRKNDGRFTVIQLVGMLRGIGSGMKY 131
Query: 204 LHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
L M ++RDL N+LV S+ ++DF +S
Sbjct: 132 LSDMSYVHRDLAARNILVNSNLVCKVSDFGMS 163
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 82/223 (36%), Gaps = 47/223 (21%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI--L 140
D + + +GSG G V+ K+K +G K ++ R K + + ERE+ L
Sbjct: 13 DFKEIELIGSGGFGQVF----KAKHRIDG---------KTYVIRRVKYNNEKAEREVKAL 59
Query: 141 EMLDH---------------------------PFLPTLYATLDCPRWSCLLT--EFCPGG 171
LDH + P + CL EFC G
Sbjct: 60 AKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKG 119
Query: 172 DLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTD 231
L +++ ++ + ++ ++++H +I+RDLKP N+ + + + D
Sbjct: 120 TLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGD 179
Query: 232 FDL--SLKGDNS-TSTAQLVSDQSPPTGDQQPNDCAVDQPPFG 271
F L SLK D T + + SP Q VD G
Sbjct: 180 FGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALG 222
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 320 GTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFY 353
GT Y++PE IS + +G VD + LG+ + EL +
Sbjct: 197 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLH 230
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 30 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 141
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + D+ L+ D+ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMT 180
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 88 HRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREI--LEMLDH 145
H +G G G VYL K+ N ++ + +L+ RI REI L L
Sbjct: 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFE--DLIDC-----KRILREITILNRLKS 84
Query: 146 PFLPTLYATL---DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
++ LY + D ++ L D + + + E ++ +++
Sbjct: 85 DYIIRLYDLIIPDDLLKFDELYI-VLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGEN 143
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSD 250
F+H GII+RDLKP N L+ D + + DF L+ + NS +V+D
Sbjct: 144 FIHESGIIHRDLKPANCLLNQDCSVKVCDFGLA-RTINSEKDTNIVND 190
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 136 EREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYAS 195
E I+ DHP + L + + ++TE G L R+ D +F +
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSF-LRKHDAQFTVIQLVGMLR 125
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++L MG ++RDL N+L+ S+ ++DF LS
Sbjct: 126 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 170 GGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIML 229
G DL+ + + Q + + V+F +++ L+++H II+RDLKP N+ V D + +
Sbjct: 110 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 166
Query: 230 TDFDLSLKGDNSTS 243
D L+ D+ +
Sbjct: 167 LDRGLARHTDDEMT 180
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 18/168 (10%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKS-SNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
D+ LG G G V+L + + S + + A K + L +R R E E+L
Sbjct: 16 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQR---EAELLT 72
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLH-VLRQRQPDK-------------RFHE 187
L H + Y ++ E+ GDL+ LR PD
Sbjct: 73 NLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGL 132
Query: 188 SAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
S + AS++ + +L ++RDL N LV ++ + + DF +S
Sbjct: 133 SQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMS 180
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 90 LGSGDIGSVY--LVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPF 147
LG G+ GSV + +++ K + A KV+ K+ + E R E +I+ LD+P+
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQID----VAIKVL-KQGTEKADTEEMMR-EAQIMHQLDNPY 397
Query: 148 LPTLYATLDCPRWSCLLTEFCPGGDLHVL----RQRQPDKRFHESAVRFYASEVVVALEF 203
+ L L+ E GG LH R+ P S V +V + +++
Sbjct: 398 IVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIP-----VSNVAELLHQVSMGMKY 451
Query: 204 LHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS--LKGDNSTSTAQ 246
L ++R+L NVL+ + + ++DF LS L D+S TA+
Sbjct: 452 LEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 496
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 16/152 (10%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCF----FAAKVMDK--RELVSRNKESRARIEREILEML 143
+G G+ G V +LK C A DK R+ +S E I+
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLS---------EASIMGQF 66
Query: 144 DHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEF 203
DHP + L + + ++TE+ G L R+ D RF + + +++
Sbjct: 67 DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAF-LRKNDGRFTVIQLVGMLRGIGSGMKY 125
Query: 204 LHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
L M ++RDL N+LV S+ ++DF +S
Sbjct: 126 LSDMSYVHRDLAARNILVNSNLVCKVSDFGMS 157
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 30 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 141
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + D L+ D+ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMT 180
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 136 EREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYAS 195
E I+ DHP + L + + ++TE G L R+ D +F +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSF-LRKHDAQFTVIQLVGMLR 154
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++L MG ++RDL N+L+ S+ ++DF LS
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 317 SFVGTHEYLAPEII----SGEGHGNAV-------DWWTLGIFIFELFYGTTPFKGIDHEL 365
S VGT Y+ PE I S +G + D W+LG ++ + YG TPF+ I +++
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 274
Query: 366 TLANVVA---RALEFPKEPSVPGPAKDLIAQLLVKDPTRRM 403
+ + + +EFP P +D++ L +DP +R+
Sbjct: 275 SKLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRI 313
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 191 RFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ Y ++ A+ +H GI++ DLKP N L+ DG + L DF ++
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIA 201
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 30 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 141
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + D L+ D+ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMT 180
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 136 EREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYAS 195
E I+ DHP + L + + ++TE G L R+ D +F +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSF-LRKHDAQFTVIQLVGMLR 154
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++L MG ++RDL N+L+ S+ ++DF LS
Sbjct: 155 GIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 170 GGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIML 229
G DL+ + + Q + + V+F +++ L+++H II+RDLKP N+ V D + +
Sbjct: 117 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173
Query: 230 TDFDLS 235
DF L+
Sbjct: 174 LDFGLA 179
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 318 FVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 170 GGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIML 229
G DL+ + + Q + + V+F +++ L+++H II+RDLKP N+ V D + +
Sbjct: 117 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173
Query: 230 TDFDLS 235
DF L+
Sbjct: 174 LDFGLA 179
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 318 FVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 170 GGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIML 229
G DL+ + + Q + + V+F +++ L+++H II+RDLKP N+ V D + +
Sbjct: 117 GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 173
Query: 230 TDFDLS 235
DF L+
Sbjct: 174 LDFGLA 179
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 318 FVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 235
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 317 SFVGTHEYLAPEII----SGEGHGNAV-------DWWTLGIFIFELFYGTTPFKGIDHEL 365
S VGT Y+ PE I S +G + D W+LG ++ + YG TPF+ I +++
Sbjct: 171 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 230
Query: 366 TLANVVA---RALEFPKEPSVPGPAKDLIAQLLVKDPTRRM 403
+ + + +EFP P +D++ L +DP +R+
Sbjct: 231 SKLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRI 269
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 191 RFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSD 250
+ Y ++ A+ +H GI++ DLKP N L+ DG + L DF ++ T +V D
Sbjct: 114 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIA--NQMQPDTTSVVKD 170
Query: 251 QSPPTGDQQPNDCAVD 266
T + P + D
Sbjct: 171 SQVGTVNYMPPEAIKD 186
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGN-AVDWWTLGIFIFELFYGTTPFKGIDH 363
+A D +V T Y APEI+ H N VD W++G + EL G T F G DH
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 228
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 13/159 (8%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
+GSG GSV + + G A K + R S R E +L+ + H +
Sbjct: 30 VGSGAYGSV----CAAFDTKTGLRVAVKKL-SRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 150 TLYATLDCPRW-----SCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFL 204
L R L G DL+ + + Q + + V+F +++ L+++
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYI 141
Query: 205 HMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTS 243
H II+RDLKP N+ V D + + F L+ D+ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMT 180
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 317 SFVGTHEYLAPEII----SGEGHGNAV-------DWWTLGIFIFELFYGTTPFKGIDHEL 365
S VGT Y+ PE I S +G + D W+LG ++ + YG TPF+ I +++
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 274
Query: 366 TLANVVA---RALEFPKEPSVPGPAKDLIAQLLVKDPTRRM 403
+ + + +EFP P +D++ L +DP +R+
Sbjct: 275 SKLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRI 313
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 191 RFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ Y ++ A+ +H GI++ DLKP N L+ DG + L DF ++
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIA 201
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 317 SFVGTHEYLAPEII----SGEGHGNAV-------DWWTLGIFIFELFYGTTPFKGIDHEL 365
S VGT Y+ PE I S +G + D W+LG ++ + YG TPF+ I +++
Sbjct: 168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 227
Query: 366 TLANVVA---RALEFPKEPSVPGPAKDLIAQLLVKDPTRRM 403
+ + + +EFP P +D++ L +DP +R+
Sbjct: 228 SKLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRI 266
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 191 RFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSD 250
+ Y ++ A+ +H GI++ DLKP N L+ DG + L DF ++ T +V D
Sbjct: 111 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIA--NQMQPDTTSVVKD 167
Query: 251 QSPPTGDQQPNDCAVD 266
T + P + D
Sbjct: 168 SQVGTVNYMPPEAIKD 183
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 317 SFVGTHEYLAPEII----SGEGHGNAV-------DWWTLGIFIFELFYGTTPFKGIDHEL 365
S VGT Y+ PE I S +G + D W+LG ++ + YG TPF+ I +++
Sbjct: 167 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 226
Query: 366 TLANVVA---RALEFPKEPSVPGPAKDLIAQLLVKDPTRRM 403
+ + + +EFP P +D++ L +DP +R+
Sbjct: 227 SKLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRI 265
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 191 RFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSD 250
+ Y ++ A+ +H GI++ DLKP N L+ DG + L DF ++ T +V D
Sbjct: 110 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIA--NQMQPDTTSVVKD 166
Query: 251 QSPPTGDQQPNDCAVD 266
T + P + D
Sbjct: 167 SQVGTVNYMPPEAIKD 182
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 317 SFVGTHEYLAPEII----SGEGHGNAV-------DWWTLGIFIFELFYGTTPFKGIDHEL 365
S VGT Y+ PE I S +G + D W+LG ++ + YG TPF+ I +++
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 246
Query: 366 TLANVVA---RALEFPKEPSVPGPAKDLIAQLLVKDPTRRM 403
+ + + +EFP P +D++ L +DP +R+
Sbjct: 247 SKLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRI 285
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 191 RFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ Y ++ A+ +H GI++ DLKP N L+ DG + L DF ++
Sbjct: 130 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIA 173
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 16/102 (15%)
Query: 317 SFVGTHEYLAPEII----SGEGHGNAV-------DWWTLGIFIFELFYGTTPFKGIDHEL 365
S VGT Y+ PE I S +G + D W+LG ++ + YG TPF+ I +++
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 246
Query: 366 TLANVVA---RALEFPKEPSVPGPAKDLIAQLLVKDPTRRMG 404
+ + + +EFP P +D++ L +DP +R+
Sbjct: 247 SKLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRIS 286
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 191 RFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSD 250
+ Y ++ A+ +H GI++ DLKP N L+ DG + L DF ++ T +V D
Sbjct: 130 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIA--NQMQPDTTSVVKD 186
Query: 251 QSPPTGDQQPNDCAVD 266
T + P + D
Sbjct: 187 SQVGTVNYMPPEAIKD 202
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 163 LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV 221
L+ E+ D VL D +R+Y E++ AL++ H GI++RD+KP NV++
Sbjct: 107 LIFEYVNNTDFKVLYPTLTD-----YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 160
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 163 LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV 221
L+ E+ D VL D +R+Y E++ AL++ H GI++RD+KP NV++
Sbjct: 105 LIFEYVNNTDFKVLYPTLTD-----YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 162 CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV 221
L+ E+ D VL D +R+Y E++ AL++ H GI++RD+KP NV++
Sbjct: 104 SLIFEYVNNTDFKVLYPTLTD-----YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 162 CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV 221
L+ E+ D VL D +R+Y E++ AL++ H GI++RD+KP NV++
Sbjct: 104 SLIFEYVNNTDFKVLYPTLTD-----YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 12/164 (7%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARI-EREILEM 142
L+ V RLG+G G V++ G + + + L + A + E +++
Sbjct: 23 LKLVERLGAGQFGEVWM----------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 72
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
L H L LYA + ++TE+ G L + + + + A+++ +
Sbjct: 73 LQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 131
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
F+ I+RDL+ N+LV + DF L+ +++ TA+
Sbjct: 132 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR 175
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 162 CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV 221
L+ E+ D VL D +R+Y E++ AL++ H GI++RD+KP NV++
Sbjct: 104 SLIFEYVNNTDFKVLYPTLTD-----YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 162 CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV 221
L+ E+ D VL D +R+Y E++ AL++ H GI++RD+KP NV++
Sbjct: 105 SLIFEYVNNTDFKVLYPTLTD-----YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 159
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 162 CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV 221
L+ E+ D VL D +R+Y E++ AL++ H GI++RD+KP NV++
Sbjct: 104 SLIFEYVNNTDFKVLYPTLTD-----YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 71/178 (39%), Gaps = 29/178 (16%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
+L F LGSG G V S A M K + S +E+ + + ++
Sbjct: 46 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 105
Query: 143 LDHPFLPTLYA--TLDCPRWSCLLTEFCPGGDL-HVLRQRQPDKRFHESAVRF------- 192
H + L TL P + L+ E+C GDL + LR ++ ++F E + +
Sbjct: 106 GSHENIVNLLGACTLSGPIY--LIFEYCCYGDLLNYLRSKR--EKFSEDEIEYENQKRLE 161
Query: 193 ---------------YASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+A +V +EFL ++RDL NVLV + + DF L+
Sbjct: 162 EEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLA 219
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 163 LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV 221
L+ E+ D VL D +R+Y E++ AL++ H GI++RD+KP NV++
Sbjct: 105 LIFEYVNNTDFKVLYPTLTD-----YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 163 LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV 221
L+ E+ D VL D +R+Y E++ AL++ H GI++RD+KP NV++
Sbjct: 106 LIFEYVNNTDFKVLYPTLTD-----YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 159
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 162 CLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV 221
L+ E+ D VL D +R+Y E++ AL++ H GI++RD+KP NV++
Sbjct: 125 SLIFEYVNNTDFKVLYPTLTD-----YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 179
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 14/159 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
++LR + LGSG G+V+ + + KV++ + ++S + +L
Sbjct: 31 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS----GRQSFQAVTDHMLA 86
Query: 142 M--LDHPFLPTLYATLDCPRWSC-LLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYASE 196
+ LDH + L CP S L+T++ P G L HV RQ + + +
Sbjct: 87 IGSLDHAHIVRLLGL--CPGSSLQLVTQYLPLGSLLDHV---RQHRGALGPQLLLNWGVQ 141
Query: 197 VVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ + +L G+++R+L NVL++S + + DF ++
Sbjct: 142 IAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA 180
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 12/164 (7%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARI-EREILEM 142
L+ V RLG+G G V++ G + + + L + A + E +++
Sbjct: 21 LKLVERLGAGQFGEVWM----------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 70
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
L H L LYA + ++TE+ G L + + + + A+++ +
Sbjct: 71 LQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 129
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
F+ I+RDL+ N+LV + DF L+ +++ TA+
Sbjct: 130 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR 173
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 68/137 (49%), Gaps = 19/137 (13%)
Query: 111 GCFFAAKVMDKREL----VSRNKESRARIEREILEMLDHPFLPTLYATLDC------PRW 160
G F AK+++ E+ V ++K + R E +I+ ++ HP + L A +
Sbjct: 54 GVVFQAKLVESDEVAIKKVLQDKRFKNR-ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112
Query: 161 SCLLTEFCPGGDLHVLRQRQPDKRFHESA----VRFYASEVVVALEFLHMMGIIYRDLKP 216
L+ E+ P V R + + ++ ++ Y +++ +L ++H +GI +RD+KP
Sbjct: 113 LNLVLEYVPET---VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKP 169
Query: 217 ENVLVR-SDGHIMLTDF 232
+N+L+ G + L DF
Sbjct: 170 QNLLLDPPSGVLKLIDF 186
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 59/144 (40%), Gaps = 40/144 (27%)
Query: 306 IVAEPLDVRSMSFVGTHEYLAPEIISGE-GHGNAVDWWTLGIFIFELFYGTTPF---KGI 361
I EP ++S + + Y APE+I G + +D W+ G + EL G F GI
Sbjct: 193 IAGEP----NVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI 248
Query: 362 DHELTLANVVA--------------RALEFPK----------EPSVPGPAKDLIAQLLVK 397
D + + V+ +FP+ P P A DLI++LL
Sbjct: 249 DQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEY 308
Query: 398 DPTRRMGSKMGATAIKR--HQFFN 419
P+ R+ TAI+ H FF+
Sbjct: 309 TPSARL------TAIEALCHPFFD 326
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 34/172 (19%)
Query: 88 HRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMD------KRELVSRNKESRARIERE--I 139
R+GSG G+VY K K + A K+++ ++ +N+ R R I
Sbjct: 14 QRIGSGSFGTVY----KGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL----HVLRQRQPDKRFHESAVRFYAS 195
L + + P L ++T++C G L H++ + +F + A
Sbjct: 67 LLFMGYSTKPQL----------AIVTQWCEGSSLYHHLHII-----ETKFEMIKLIDIAR 111
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQL 247
+ +++LH II+RDLK N+ + D + + DF L+ + + + Q
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 163
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 12/164 (7%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARI-EREILEM 142
L+ V RLG+G G V++ G + + + L + A + E +++
Sbjct: 24 LKLVERLGAGQFGEVWM----------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 73
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
L H L LYA + ++TE+ G L + + + + A+++ +
Sbjct: 74 LQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 132
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
F+ I+RDL+ N+LV + DF L+ +++ TA+
Sbjct: 133 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR 176
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 148 LPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMM 207
+P +Y C +++ ++ E G L L D+ F V A +++ +E++H
Sbjct: 67 IPQVYYFGPCGKYNAMVLELL-GPSLEDLFD-LCDRTFSLKTVLMIAIQLISRMEYVHSK 124
Query: 208 GIIYRDLKPENVLVRSDGH-----IMLTDFDLS 235
+IYRD+KPEN L+ G+ I + DF L+
Sbjct: 125 NLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA 157
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 14/159 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
++LR + LGSG G+V+ + + KV++ + ++S + +L
Sbjct: 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS----GRQSFQAVTDHMLA 68
Query: 142 M--LDHPFLPTLYATLDCPRWSC-LLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYASE 196
+ LDH + L CP S L+T++ P G L HV RQ + + +
Sbjct: 69 IGSLDHAHIVRLLGL--CPGSSLQLVTQYLPLGSLLDHV---RQHRGALGPQLLLNWGVQ 123
Query: 197 VVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ + +L G+++R+L NVL++S + + DF ++
Sbjct: 124 IAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA 162
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 34/160 (21%)
Query: 88 HRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMD------KRELVSRNKESRARIERE--I 139
R+GSG G+VY K K + A K+++ ++ +N+ R R I
Sbjct: 14 QRIGSGSFGTVY----KGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL----HVLRQRQPDKRFHESAVRFYAS 195
L + + P L ++T++C G L H++ + +F + A
Sbjct: 67 LLFMGYSTAPQL----------AIVTQWCEGSSLYHHLHII-----ETKFEMIKLIDIAR 111
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++LH II+RDLK N+ + D + + DF L+
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 12/164 (7%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARI-EREILEM 142
L+ V RLG+G G V++ G + + + L + A + E +++
Sbjct: 15 LKLVERLGAGQFGEVWM----------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 64
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
L H L LYA + ++TE+ G L + + + + A+++ +
Sbjct: 65 LQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
F+ I+RDL+ N+LV + DF L+ +++ TA+
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR 167
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 190 VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
++++ +++ L LH G+++RDL P N+L+ + I + DF+L+
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 12/164 (7%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARI-EREILEM 142
L+ V RLG+G G V++ G + + + L + A + E +++
Sbjct: 25 LKLVERLGAGQFGEVWM----------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 74
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
L H L LYA + ++TE+ G L + + + + A+++ +
Sbjct: 75 LQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 133
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
F+ I+RDL+ N+LV + DF L+ +++ TA+
Sbjct: 134 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR 177
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 163 LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVR 222
++ E+ G L +R ++ + Y E++ AL +LH +G++Y DLKPEN
Sbjct: 161 IVMEYVGGQSL----KRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPEN---- 212
Query: 223 SDGHIMLTDFDLSL 236
IMLT+ L L
Sbjct: 213 ----IMLTEEQLKL 222
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 12/164 (7%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARI-EREILEM 142
L+ V RLG+G G V++ G + + + L + A + E +++
Sbjct: 17 LKLVERLGAGQFGEVWM----------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 66
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
L H L LYA + ++TE+ G L + + + + A+++ +
Sbjct: 67 LQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 125
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
F+ I+RDL+ N+LV + DF L+ +++ TA+
Sbjct: 126 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR 169
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%)
Query: 190 VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
++++ +++ L LH G+++RDL P N+L+ + I + DF+L+
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 67/163 (41%), Gaps = 14/163 (8%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
T DL+ + +G G GSV K +G A K + R V ++ + ++ +
Sbjct: 19 FTAEDLKDLGEIGRGAYGSVN----KMVHKPSGQIMAVKRI--RSTVDEKEQKQLLMDLD 72
Query: 139 I-LEMLDHPFLPTLYATL----DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFY 193
+ + D P++ Y L DC W C+ + D E +
Sbjct: 73 VVMRSSDCPYIVQFYGALFREGDC--WICMELMSTSFDKFYKYVYSVLDDVIPEEILGKI 130
Query: 194 ASEVVVALEFL-HMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
V AL L + II+RD+KP N+L+ G+I L DF +S
Sbjct: 131 TLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS 173
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 320 GTHEYLAPEII----SGEGHGNAVDWWTLGIFIFELFYGTTPF 358
G Y+APE I S +G+ D W+LGI ++EL G P+
Sbjct: 187 GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY 229
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 12/164 (7%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARI-EREILEM 142
L+ V RLG+G G V++ G + + + L + A + E +++
Sbjct: 15 LKLVERLGAGQAGEVWM----------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 64
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
L H L LYA + ++TE+ G L + + + + A+++ +
Sbjct: 65 LQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
F+ I+RDL+ N+LV + DF L+ +++ TA+
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAR 167
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 148 LPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMM 207
+P +Y C +++ ++ E G L L D+ F V A +++ +E++H
Sbjct: 67 IPQVYYFGPCGKYNAMVLELL-GPSLEDLFD-LCDRTFSLKTVLMIAIQLISRMEYVHSK 124
Query: 208 GIIYRDLKPENVLVRSDGH-----IMLTDFDLS 235
+IYRD+KPEN L+ G+ I + DF L+
Sbjct: 125 NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 34/172 (19%)
Query: 88 HRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMD------KRELVSRNKESRARIERE--I 139
R+GSG G+VY K K + A K+++ ++ +N+ R R I
Sbjct: 34 QRIGSGSFGTVY----KGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 86
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL----HVLRQRQPDKRFHESAVRFYAS 195
L + + P L ++T++C G L H++ + +F + A
Sbjct: 87 LLFMGYSTKPQL----------AIVTQWCEGSSLYHHLHII-----ETKFEMIKLIDIAR 131
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQL 247
+ +++LH II+RDLK N+ + D + + DF L+ + + + Q
Sbjct: 132 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 183
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 148 LPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMM 207
+P +Y C +++ ++ E G L L D+ F V A +++ +E++H
Sbjct: 88 IPQVYYFGPCGKYNAMVLELL-GPSLEDLFDL-CDRTFSLKTVLMIAIQLISRMEYVHSK 145
Query: 208 GIIYRDLKPENVLVRSDGH-----IMLTDFDLS 235
+IYRD+KPEN L+ G+ I + DF L+
Sbjct: 146 NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 178
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 182 DKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDG-----HIMLTDFDLS 235
D+ F V A +++ +E++H +IYRD+KPEN LV G I + DF L+
Sbjct: 94 DRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLA 152
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 34/172 (19%)
Query: 88 HRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMD------KRELVSRNKESRARIERE--I 139
R+GSG G+VY K K + A K+++ ++ +N+ R R I
Sbjct: 42 QRIGSGSFGTVY----KGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 94
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL----HVLRQRQPDKRFHESAVRFYAS 195
L + + P L ++T++C G L H++ + +F + A
Sbjct: 95 LLFMGYSTKPQL----------AIVTQWCEGSSLYHHLHII-----ETKFEMIKLIDIAR 139
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQL 247
+ +++LH II+RDLK N+ + D + + DF L+ + + + Q
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 191
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 68/163 (41%), Gaps = 10/163 (6%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
L+ V RLG+G G V++ N A K + + + E +++ L
Sbjct: 15 LKLVERLGAGQFGEVWM-----GYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQL 65
Query: 144 DHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEF 203
H L LYA + ++TE+ G L + + + + A+++ + F
Sbjct: 66 QHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 204 LHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
+ I+RDL+ N+LV + DF L+ +++ TA+
Sbjct: 125 IEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR 167
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 68/163 (41%), Gaps = 10/163 (6%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
L+ V RLG+G G V++ N A K + + + E +++ L
Sbjct: 16 LKLVERLGAGQFGEVWM-----GYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQL 66
Query: 144 DHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEF 203
H L LYA + ++TE+ G L + + + + A+++ + F
Sbjct: 67 QHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 125
Query: 204 LHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
+ I+RDL+ N+LV + DF L+ +++ TA+
Sbjct: 126 IEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR 168
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 62/154 (40%), Gaps = 7/154 (4%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
L+ + LG G G V L + G A K + +E S + E EIL L
Sbjct: 11 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--KEGCGPQLRSGWQREIEILRTL 68
Query: 144 DHPFLPTLYATLD--CPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
H + + + L+ E+ P G L R P + + +A ++ +
Sbjct: 69 YHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL---RDYLPRHCVGLAQLLLFAQQICEGM 125
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+LH I+R L NVL+ +D + + DF L+
Sbjct: 126 AYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLA 159
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 12/164 (7%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARI-EREILEM 142
L+ V RLG+G G V++ G + + + L + A + E +++
Sbjct: 21 LKLVERLGAGQFGEVWM----------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 70
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
L H L LYA + ++TE+ G L + + + + A+++ +
Sbjct: 71 LQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 129
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
F+ I+RDL+ N+LV + DF L+ +++ TA+
Sbjct: 130 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR 173
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 12/164 (7%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARI-EREILEM 142
L+ V RLG+G G V++ G + + + L + A + E +++
Sbjct: 20 LKLVERLGAGQFGEVWM----------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 69
Query: 143 LDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
L H L LYA + ++TE+ G L + + + + A+++ +
Sbjct: 70 LQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 128
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
F+ I+RDL+ N+LV + DF L+ +++ TA+
Sbjct: 129 FIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR 172
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 34/160 (21%)
Query: 88 HRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMD------KRELVSRNKESRARIERE--I 139
R+GSG G+VY K K + A K+++ ++ +N+ R R I
Sbjct: 19 QRIGSGSFGTVY----KGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 71
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL----HVLRQRQPDKRFHESAVRFYAS 195
L + + P L ++T++C G L H++ + +F + A
Sbjct: 72 LLFMGYSTKPQL----------AIVTQWCEGSSLYHHLHII-----ETKFEMIKLIDIAR 116
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++LH II+RDLK N+ + D + + DF L+
Sbjct: 117 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 62/154 (40%), Gaps = 7/154 (4%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
L+ + LG G G V L + G A K + +E S + E EIL L
Sbjct: 10 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--KEGCGPQLRSGWQREIEILRTL 67
Query: 144 DHPFLPTLYATLD--CPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
H + + + L+ E+ P G L R P + + +A ++ +
Sbjct: 68 YHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL---RDYLPRHCVGLAQLLLFAQQICEGM 124
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+LH I+R L NVL+ +D + + DF L+
Sbjct: 125 AYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLA 158
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 34/160 (21%)
Query: 88 HRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMD------KRELVSRNKESRARIERE--I 139
R+GSG G+VY K K + A K+++ ++ +N+ R R I
Sbjct: 14 QRIGSGSFGTVY----KGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL----HVLRQRQPDKRFHESAVRFYAS 195
L + + P L ++T++C G L H++ + +F + A
Sbjct: 67 LLFMGYSTKPQL----------AIVTQWCEGSSLYHHLHII-----ETKFEMIKLIDIAR 111
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++LH II+RDLK N+ + D + + DF L+
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 159 RWSCLLTEFCPGGDLHVLRQR-QPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPE 217
++ ++ E+ P VL+ + + + + Y ++ A+ F+H +GI +RD+KP+
Sbjct: 111 KYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQ 170
Query: 218 NVLVRS-DGHIMLTDF 232
N+LV S D + L DF
Sbjct: 171 NLLVNSKDNTLKLCDF 186
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 34/160 (21%)
Query: 88 HRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMD------KRELVSRNKESRARIERE--I 139
R+GSG G+VY K K + A K+++ ++ +N+ R R I
Sbjct: 19 QRIGSGSFGTVY----KGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 71
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL----HVLRQRQPDKRFHESAVRFYAS 195
L + + P L ++T++C G L H++ + +F + A
Sbjct: 72 LLFMGYSTKPQL----------AIVTQWCEGSSLYHHLHII-----ETKFEMIKLIDIAR 116
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++LH II+RDLK N+ + D + + DF L+
Sbjct: 117 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 67/163 (41%), Gaps = 10/163 (6%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
L+ V RLG+G G V++ NG KV K E +++ L
Sbjct: 15 LKLVERLGAGQFGEVWM------GYYNG---HTKVAVKSLKQGSMSPDAFLAEANLMKQL 65
Query: 144 DHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEF 203
H L LYA + ++TE+ G L + + + + A+++ + F
Sbjct: 66 QHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 204 LHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
+ I+RDL+ N+LV + DF L+ +++ TA+
Sbjct: 125 IEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR 167
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 34/160 (21%)
Query: 88 HRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMD------KRELVSRNKESRARIERE--I 139
R+GSG G+VY K K + A K+++ ++ +N+ R R I
Sbjct: 16 QRIGSGSFGTVY----KGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 68
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL----HVLRQRQPDKRFHESAVRFYAS 195
L + + P L ++T++C G L H++ + +F + A
Sbjct: 69 LLFMGYSTKPQL----------AIVTQWCEGSSLYHHLHII-----ETKFEMIKLIDIAR 113
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++LH II+RDLK N+ + D + + DF L+
Sbjct: 114 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 153
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 317 SFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLA 368
+ V T Y APE+I G D W++G IFE + G T F+ D+ LA
Sbjct: 212 TIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLA 263
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
Query: 190 VRFYASEVVVALEFLHMMGIIYRDLKPENVL-VRSDGHIMLTDFDLSLKGDNST--STAQ 246
VR A ++ A++FLH + + DLKPEN+L V SD + ++L K D + STA
Sbjct: 139 VRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELT---YNLEKKRDERSVKSTAV 195
Query: 247 LVSDQSPPTGDQQPNDCAVDQPPFGNSSCIIPN-----CIVPAVSCL 288
V D T D + + V + I+ C V ++ C+
Sbjct: 196 RVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCI 242
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 15/166 (9%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARI-EREILEM 142
LR +LG G G V++ G + + + L N A + E ++++
Sbjct: 187 LRLEVKLGQGCFGEVWM----------GTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKK 236
Query: 143 LDHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
L H L LYA + + P + ++TE+ G L + + K + A+++ +
Sbjct: 237 LRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 294
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS-LKGDNSTSTAQ 246
++ M ++RDL+ N+LV + + DF L L DN + Q
Sbjct: 295 AYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQ 340
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 340 DWWTLGIFIFELFY-GTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKD 398
D W+ GI + EL G P+ G+ + L + V R P P P DL+ Q KD
Sbjct: 364 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 422
Query: 399 PTRR 402
P R
Sbjct: 423 PEER 426
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 62/154 (40%), Gaps = 7/154 (4%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
L+ + LG G G V L + G A K + + S + E +IL L
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--KADCGPQHRSGWKQEIDILRTL 73
Query: 144 DHPFLPTLYATLD--CPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
H + + + L+ E+ P G L R P + + +A ++ +
Sbjct: 74 YHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL---RDYLPRHSIGLAQLLLFAQQICEGM 130
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+LH I+R+L NVL+ +D + + DF L+
Sbjct: 131 AYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLA 164
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + LGSG G+VY + +M+ RE S E
Sbjct: 46 LKETEFKKIKVLGSGAFGTVY--KGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAY 103
Query: 139 ILEMLDHPFLPTLYATLDCPRWSC-LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
++ +D+P + L C + L+T+ P G L + D + + + ++
Sbjct: 104 VMASVDNPHVCRLLGI--CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQI 160
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +L +++RDL NVLV++ H+ +TDF L+
Sbjct: 161 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 198
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 72/169 (42%), Gaps = 16/169 (9%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
++L+F LG+G G V + A M K + KE+ + +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL-HVLRQRQP-------------DKRFHE 187
+ H + L ++TE+C GDL + LR+++P +++
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 188 SAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIM-LTDFDLS 235
+ ++S+V + FL I+RD+ NVL+ ++GH+ + DF L+
Sbjct: 166 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLA 213
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 182 DKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGH-----IMLTDFDLS 235
D+ F V A +++ +E++H +IYRD+KPEN L+ G+ I + DF L+
Sbjct: 91 DRTFTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLA 149
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 34/160 (21%)
Query: 88 HRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMD------KRELVSRNKESRARIERE--I 139
R+GSG G+VY K K + A K+++ ++ +N+ R R I
Sbjct: 42 QRIGSGSFGTVY----KGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 94
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL----HVLRQRQPDKRFHESAVRFYAS 195
L + + P L ++T++C G L H++ + +F + A
Sbjct: 95 LLFMGYSTKPQL----------AIVTQWCEGSSLYHHLHII-----ETKFEMIKLIDIAR 139
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++LH II+RDLK N+ + D + + DF L+
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 34/160 (21%)
Query: 88 HRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMD------KRELVSRNKESRARIERE--I 139
R+GSG G+VY K K + A K+++ ++ +N+ R R I
Sbjct: 41 QRIGSGSFGTVY----KGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 93
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL----HVLRQRQPDKRFHESAVRFYAS 195
L + + P L ++T++C G L H++ + +F + A
Sbjct: 94 LLFMGYSTKPQL----------AIVTQWCEGSSLYHHLHII-----ETKFEMIKLIDIAR 138
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +++LH II+RDLK N+ + D + + DF L+
Sbjct: 139 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 178
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 68/163 (41%), Gaps = 10/163 (6%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
L+ V RLG+G G V++ N A K + + + E +++ L
Sbjct: 10 LKLVERLGAGQFGEVWM-----GYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQL 60
Query: 144 DHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEF 203
H L LYA + ++TE+ G L + + + + A+++ + F
Sbjct: 61 QHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 119
Query: 204 LHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
+ I+RDL+ N+LV + DF L+ +++ TA+
Sbjct: 120 IEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR 162
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 170 GGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIML 229
G DL+ L + Q H + ++ +++ L+++H +++RDLKP N+L+ + + +
Sbjct: 129 GADLYKLLKTQHLSNDH---ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKI 185
Query: 230 TDFDLSLKGD 239
DF L+ D
Sbjct: 186 CDFGLARVAD 195
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 30/132 (22%)
Query: 318 FVGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKG------IDHEL----- 365
+V T Y APEI ++ +G+ ++D W++G + E+ F G ++H L
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 266
Query: 366 -------TLANVVAR--ALEFPKEPSVP---------GPAKDLIAQLLVKDPTRRMGSKM 407
+ N+ AR L P + VP A DL+ ++L +P +R+ +
Sbjct: 267 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 326
Query: 408 GATAIKRHQFFN 419
Q+++
Sbjct: 327 ALAHPYLEQYYD 338
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 62/154 (40%), Gaps = 7/154 (4%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
L+ + LG G G V L + G A K + + S + E +IL L
Sbjct: 16 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--KADCGPQHRSGWKQEIDILRTL 73
Query: 144 DHPFLPTLYATLD--CPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
H + + + L+ E+ P G L R P + + +A ++ +
Sbjct: 74 YHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL---RDYLPRHSIGLAQLLLFAQQICEGM 130
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+LH I+R+L NVL+ +D + + DF L+
Sbjct: 131 AYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLA 164
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 136 EREILEMLDHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYA 194
E ++++ L H L LYA + + P + ++TE+ G L + + K + A
Sbjct: 312 EAQVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA 369
Query: 195 SEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS-LKGDNSTSTAQ 246
+++ + ++ M ++RDL+ N+LV + + DF L+ L DN + Q
Sbjct: 370 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 422
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 340 DWWTLGIFIFELFY-GTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKD 398
D W+ GI + EL G P+ G+ + L + V R P P P DL+ Q K+
Sbjct: 446 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 504
Query: 399 PTRR 402
P R
Sbjct: 505 PEER 508
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 16/101 (15%)
Query: 317 SFVGTHEYLAPEII----SGEGHGNAV-------DWWTLGIFIFELFYGTTPFKGIDHEL 365
S VG Y+ PE I S +G + D W+LG ++ + YG TPF+ I +++
Sbjct: 215 SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 274
Query: 366 TLANVVA---RALEFPKEPSVPGPAKDLIAQLLVKDPTRRM 403
+ + + +EFP P +D++ L +DP +R+
Sbjct: 275 SKLHAIIDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRI 313
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 191 RFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ Y ++ A+ +H GI++ DLKP N L+ DG + L DF ++
Sbjct: 158 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIA 201
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + LGSG G+VY + A K + RE S E
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAY 69
Query: 139 ILEMLDHPFLPTLYATLDCPRWSC-LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
++ +D+P + L C + L+T+ P G L + D + + + ++
Sbjct: 70 VMASVDNPHVCRLLGI--CLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLN-WCVQI 126
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +L +++RDL NVLV++ H+ +TDF L+
Sbjct: 127 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 12/164 (7%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
L+ +LG+G G V++ + N A K M + + A + ++ L
Sbjct: 17 LKLEKKLGAGQFGEVWMA-----TYNKHTKVAVKTMKPGSMSVEAFLAEANV----MKTL 67
Query: 144 DHPFLPTLYATLDCPRWSCLLTEFCPGGDL-HVLRQRQPDKRFHESAVRFYASEVVVALE 202
H L L+A + ++TEF G L L+ + K+ + F ++++ +
Sbjct: 68 QHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF-SAQIAEGMA 125
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
F+ I+RDL+ N+LV + + DF L+ +++ TA+
Sbjct: 126 FIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 169
Score = 28.5 bits (62), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGIDHELTLANVVARALEFPKEP 381
++ APE I+ D W+ GI + E+ YG P+ G+ + + + R P+
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI-RALERGYRMPRPE 235
Query: 382 SVPGPAKDLIAQLLVKDPTRR 402
+ P +++ + P R
Sbjct: 236 NCPEELYNIMMRCWKNRPEER 256
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
LR +LG G G V++ + N A K + + + E+ + E ++++
Sbjct: 11 ESLRLEVKLGQGCFGEVWM-----GTWNGTTRVAIKTLKPGTM---SPEAFLQ-EAQVMK 61
Query: 142 MLDHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
L H L LYA + + P + ++TE+ G L + + K + A+++
Sbjct: 62 KLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 119
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS-LKGDNSTSTAQ 246
+ ++ M ++RDL+ N+LV + + DF L+ L DN + Q
Sbjct: 120 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 166
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 340 DWWTLGIFIFELFY-GTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKD 398
D W+ GI + EL G P+ G+ + L + V R P P P DL+ Q K+
Sbjct: 190 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 248
Query: 399 PTRR 402
P R
Sbjct: 249 PEER 252
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 12/164 (7%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
L+ +LG+G G V++ + N A K M + + A + ++ L
Sbjct: 190 LKLEKKLGAGQFGEVWMA-----TYNKHTKVAVKTMKPGSMSVEAFLAEANV----MKTL 240
Query: 144 DHPFLPTLYATLDCPRWSCLLTEFCPGGDL-HVLRQRQPDKRFHESAVRFYASEVVVALE 202
H L L+A + ++TEF G L L+ + K+ + F ++++ +
Sbjct: 241 QHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF-SAQIAEGMA 298
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
F+ I+RDL+ N+LV + + DF L+ +++ TA+
Sbjct: 299 FIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 342
Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGIDHELTLANVVARALEFPKEP 381
++ APE I+ D W+ GI + E+ YG P+ G+ + + + R P+
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI-RALERGYRMPRPE 408
Query: 382 SVPGPAKDLIAQLLVKDPTRR 402
+ P +++ + P R
Sbjct: 409 NCPEELYNIMMRCWKNRPEER 429
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 136 EREILEMLDHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYA 194
E ++++ L H L LYA + + P + ++TE+ G L + + K + A
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA 286
Query: 195 SEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS-LKGDNSTSTAQ 246
+++ + ++ M ++RDL+ N+LV + + DF L+ L DN + Q
Sbjct: 287 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Score = 31.6 bits (70), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 340 DWWTLGIFIFELFY-GTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKD 398
D W+ GI + EL G P+ G+ + L + V R P P P DL+ Q K+
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 399 PTRR 402
P R
Sbjct: 422 PEER 425
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 71/171 (41%), Gaps = 6/171 (3%)
Query: 66 ATSEGXXXXXXXPLTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELV 125
A+ E L ++ + + LGSG G+VY + A K + RE
Sbjct: 5 ASGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REAT 62
Query: 126 SRNKESRARIEREILEMLDHPFLPTLYATLDCPRWSC-LLTEFCPGGDLHVLRQRQPDKR 184
S E ++ +D+P + L C + L+T+ P G L + D
Sbjct: 63 SPKANKEILDEAYVMASVDNPHVCRLLGI--CLTSTVQLITQLMPFGCLLDYVREHKDNI 120
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ + + ++ + +L +++RDL NVLV++ H+ +TDF L+
Sbjct: 121 GSQYLLN-WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 170
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 136 EREILEMLDHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYA 194
E ++++ L H L LYA + + P + ++TE+ G L + + K + A
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA 286
Query: 195 SEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS-LKGDNSTSTAQ 246
+++ + ++ M ++RDL+ N+LV + + DF L+ L DN + Q
Sbjct: 287 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Score = 31.6 bits (70), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 340 DWWTLGIFIFELFY-GTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKD 398
D W+ GI + EL G P+ G+ + L + V R P P P DL+ Q K+
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 399 PTRR 402
P R
Sbjct: 422 PEER 425
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 11/164 (6%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
LR +LG G G V++ + N A K + + + E+ + E ++++ L
Sbjct: 10 LRLEVKLGQGCFGEVWM-----GTWNGTTRVAIKTLKPGTM---SPEAFLQ-EAQVMKKL 60
Query: 144 DHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEF 203
H L LYA + ++TE+ G L + + K + A+++ + +
Sbjct: 61 RHEKLVQLYAVVS-EEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 119
Query: 204 LHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS-LKGDNSTSTAQ 246
+ M ++RDL+ N+LV + + DF L+ L DN + Q
Sbjct: 120 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQ 163
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 340 DWWTLGIFIFELFY-GTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKD 398
D W+ GI + EL G P+ G+ + L + V R P P P DL+ Q K+
Sbjct: 187 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 245
Query: 399 PTRR 402
P R
Sbjct: 246 PEER 249
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + LGSG G+VY + A K + RE S E
Sbjct: 37 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAY 94
Query: 139 ILEMLDHPFLPTLYATLDCPRWSC-LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
++ +D+P + L C + L+T+ P G L + D + + + ++
Sbjct: 95 VMASVDNPHVCRLLGI--CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQI 151
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +L +++RDL NVLV++ H+ +TDF L+
Sbjct: 152 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 189
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
LR +LG G G V++ + N A K + + + E+ + E ++++ L
Sbjct: 11 LRLEVKLGQGCFGEVWM-----GTWNGTTRVAIKTLKPGTM---SPEAFLQ-EAQVMKKL 61
Query: 144 DHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
H L LYA + + P + ++TE+ G L + + K + A+++ +
Sbjct: 62 RHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 119
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS-LKGDNSTSTAQ 246
++ M ++RDL+ N+LV + + DF L+ L DN + Q
Sbjct: 120 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 164
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 340 DWWTLGIFIFELFY-GTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKD 398
D W+ GI + EL G P+ G+ + L + V R P P P DL+ Q KD
Sbjct: 188 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 246
Query: 399 PTRR 402
P R
Sbjct: 247 PEER 250
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + LGSG G+VY + A K + RE S E
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAY 71
Query: 139 ILEMLDHPFLPTLYATLDCPRWSC-LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
++ +D+P + L C + L+T+ P G L + D + + + ++
Sbjct: 72 VMASVDNPHVCRLLGI--CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQI 128
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +L +++RDL NVLV++ H+ +TDF L+
Sbjct: 129 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
LR +LG G G V++ + N A K + + + E+ + E ++++ L
Sbjct: 20 LRLEVKLGQGCFGEVWM-----GTWNGTTRVAIKTLKPGTM---SPEAFLQ-EAQVMKKL 70
Query: 144 DHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
H L LYA + + P + ++TE+ G L + + K + A+++ +
Sbjct: 71 RHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS-LKGDNSTSTAQ 246
++ M ++RDL+ N+LV + + DF L+ L DN + Q
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 340 DWWTLGIFIFELFY-GTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKD 398
D W+ GI + EL G P+ G+ + L + V R P P P DL+ Q KD
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 399 PTRR 402
P R
Sbjct: 256 PEER 259
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + LGSG G+VY + A K + RE S E
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAY 72
Query: 139 ILEMLDHPFLPTLYATLDCPRWSC-LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
++ +D+P + L C + L+T+ P G L + D + + + ++
Sbjct: 73 VMASVDNPHVCRLLGI--CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQI 129
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +L +++RDL NVLV++ H+ +TDF L+
Sbjct: 130 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + LGSG G+VY + A K + RE S E
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAY 76
Query: 139 ILEMLDHPFLPTLYATLDCPRWSC-LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
++ +D+P + L C + L+T+ P G L + D + + + ++
Sbjct: 77 VMASVDNPHVCRLLGI--CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQI 133
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +L +++RDL NVLV++ H+ +TDF L+
Sbjct: 134 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
LR +LG G G V++ + N A K + + + E+ + E ++++
Sbjct: 7 ESLRLEVKLGQGCFGEVWM-----GTWNGTTRVAIKTLKPGTM---SPEAFLQ-EAQVMK 57
Query: 142 MLDHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
L H L LYA + + P + ++TE+ G L + + K + A+++
Sbjct: 58 KLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 115
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS-LKGDNSTSTAQ 246
+ ++ M ++RDL+ N+LV + + DF L+ L DN + Q
Sbjct: 116 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 162
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 340 DWWTLGIFIFELFY-GTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKD 398
D W+ GI + EL G P+ G+ + L + V R P P P DL+ Q KD
Sbjct: 186 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 244
Query: 399 PTRR 402
P R
Sbjct: 245 PEER 248
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + LGSG G+VY + A K + RE S E
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAY 72
Query: 139 ILEMLDHPFLPTLYATLDCPRWSC-LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
++ +D+P + L C + L+T+ P G L + D + + + ++
Sbjct: 73 VMASVDNPHVCRLLGI--CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQI 129
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +L +++RDL NVLV++ H+ +TDF L+
Sbjct: 130 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + LGSG G+VY + A K + RE S E
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAY 72
Query: 139 ILEMLDHPFLPTLYATLDCPRWSC-LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
++ +D+P + L C + L+T+ P G L + D + + + ++
Sbjct: 73 VMASVDNPHVCRLLGI--CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQI 129
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +L +++RDL NVLV++ H+ +TDF L+
Sbjct: 130 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + LGSG G+VY + A K + RE S E
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAY 69
Query: 139 ILEMLDHPFLPTLYATLDCPRWSC-LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
++ +D+P + L C + L+T+ P G L + D + + + ++
Sbjct: 70 VMASVDNPHVCRLLGI--CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQI 126
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +L +++RDL NVLV++ H+ +TDF L+
Sbjct: 127 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 12/156 (7%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
L+ +LG+G G V++ + N A K M + + A + ++ L
Sbjct: 184 LKLEKKLGAGQFGEVWMA-----TYNKHTKVAVKTMKPGSMSVEAFLAEANV----MKTL 234
Query: 144 DHPFLPTLYATLDCPRWSCLLTEFCPGGDL-HVLRQRQPDKRFHESAVRFYASEVVVALE 202
H L L+A + ++TEF G L L+ + K+ + F ++++ +
Sbjct: 235 QHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF-SAQIAEGMA 292
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKG 238
F+ I+RDL+ N+LV + + DF L+ G
Sbjct: 293 FIEQRNYIHRDLRAANILVSASLVCKIADFGLARVG 328
Score = 28.5 bits (62), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGIDHELTLANVVARALEFPKEP 381
++ APE I+ D W+ GI + E+ YG P+ G+ + + + R P+
Sbjct: 334 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI-RALERGYRMPRPE 392
Query: 382 SVPGPAKDLIAQLLVKDPTRR 402
+ P +++ + P R
Sbjct: 393 NCPEELYNIMMRCWKNRPEER 413
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 67/163 (41%), Gaps = 10/163 (6%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
++L+F LG+G G V + A M K + KE+ + +
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVR--------FY 193
+ H + L ++TE+C GDL +R+ + + R +
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 194 ASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIM-LTDFDLS 235
+S+V + FL I+RD+ NVL+ ++GH+ + DF L+
Sbjct: 158 SSQVAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLA 199
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 72/165 (43%), Gaps = 14/165 (8%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARI-EREILEM 142
L+ V RLG+G G V++ G + + + L + A + E +++
Sbjct: 11 LKLVERLGAGQFGEVWM----------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQ 60
Query: 143 LDHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVAL 201
L H L LYA + P + ++TE+ G L + + + + A+++ +
Sbjct: 61 LQHQRLVRLYAVVTQEPIY--IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 118
Query: 202 EFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQ 246
F+ I+R+L+ N+LV + DF L+ +++ TA+
Sbjct: 119 AFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAR 163
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + LGSG G+VY + A K + RE S E
Sbjct: 22 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAY 79
Query: 139 ILEMLDHPFLPTLYATLDCPRWSC-LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
++ +D+P + L C + L+T+ P G L + D + + + ++
Sbjct: 80 VMASVDNPHVCRLLGI--CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQI 136
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +L +++RDL NVLV++ H+ +TDF L+
Sbjct: 137 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 174
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + LGSG G+VY + A K + RE S E
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAY 69
Query: 139 ILEMLDHPFLPTLYATLDCPRWSC-LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
++ +D+P + L C + L+T+ P G L + D + + + ++
Sbjct: 70 VMASVDNPHVCRLLGI--CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQI 126
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +L +++RDL NVLV++ H+ +TDF L+
Sbjct: 127 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 67/163 (41%), Gaps = 10/163 (6%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
++L+F LG+G G V + A M K + KE+ + +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVR--------FY 193
+ H + L ++TE+C GDL +R+ + + R +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 194 ASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIM-LTDFDLS 235
+S+V + FL I+RD+ NVL+ ++GH+ + DF L+
Sbjct: 166 SSQVAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLA 207
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 163 LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMG--IIYRDLKPENVL 220
LLTE C G + L++ + V + A++ +H II+RDLK EN+L
Sbjct: 111 LLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLL 170
Query: 221 VRSDGHIMLTDF 232
+ + G I L DF
Sbjct: 171 LSNQGTIKLCDF 182
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 172 DLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGH--IML 229
+L+ L ++ + F VR +A ++ L+ LH II+ DLKPEN+L++ G I +
Sbjct: 184 NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKV 243
Query: 230 TDFDLS 235
DF S
Sbjct: 244 IDFGSS 249
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 314 RSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVV 371
R + + Y APE+I G +G +D W+LG + EL G G D LA ++
Sbjct: 255 RVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI 312
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 315 SMSFVGTHEYLAPEIISGEGH-GNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVV 371
+++++ + Y APE+I G H AVD W++G E+ G F+G + L +V
Sbjct: 188 NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIV 245
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 190 VRFYASEVVVALEFLHM--MGIIYRDLKPENVLV-RSDGHIMLTDF 232
++ + +++ ++ LH+ + + +RD+KP NVLV +DG + L DF
Sbjct: 131 IKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDF 176
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 172 DLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGH--IML 229
+L+ L ++ + F VR +A ++ L+ LH II+ DLKPEN+L++ G I +
Sbjct: 184 NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKV 243
Query: 230 TDFDLS 235
DF S
Sbjct: 244 IDFGSS 249
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 314 RSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVV 371
R + + + Y APE+I G +G +D W+LG + EL G G D LA ++
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI 312
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + LGSG G+VY + A K + RE S E
Sbjct: 9 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAY 66
Query: 139 ILEMLDHPFLPTLYATLDCPRWSC-LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
++ +D+P + L C + L+T+ P G L + D + + + ++
Sbjct: 67 VMASVDNPHVCRLLGI--CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQI 123
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +L +++RDL NVLV++ H+ +TDF L+
Sbjct: 124 AEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 161
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 13/165 (7%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
LR +LG G G V++ + N A K + + A++ ++I
Sbjct: 20 LRLEVKLGQGCFGEVWM-----GTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKI---- 70
Query: 144 DHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
H L LYA + + P + ++TE+ G L + + K + A+++ +
Sbjct: 71 RHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS-LKGDNSTSTAQ 246
++ M ++RDL+ N+LV + + DF L+ L DN + Q
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 340 DWWTLGIFIFELFY-GTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKD 398
D W+ GI + EL G P+ G+ + L + V R P P P DL+ Q KD
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 399 PTRR 402
P R
Sbjct: 256 PEER 259
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + LGSG G+VY + A K + RE S E
Sbjct: 6 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAY 63
Query: 139 ILEMLDHPFLPTLYATLDCPRWSC-LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
++ +D+P + L C + L+T+ P G L + D + + + ++
Sbjct: 64 VMASVDNPHVCRLLGI--CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQI 120
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +L +++RDL NVLV++ H+ +TDF L+
Sbjct: 121 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 158
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 172 DLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTD 231
DL+ L + Q + + ++ +++ L+++H +++RDLKP N+L+ + + + D
Sbjct: 131 DLYKLLKSQ---QLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICD 187
Query: 232 FDLSLKGD 239
F L+ D
Sbjct: 188 FGLARIAD 195
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 319 VGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVVARALEF 377
V T Y APEI ++ +G+ ++D W++G + E+ F G H L N + L
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG-KHYLDQLNHILGILGS 266
Query: 378 PKE 380
P +
Sbjct: 267 PSQ 269
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGIDHELTLANVVARALEFPKEP 381
+++APE I + D W+ GIF++ELF G++P+ G+ + ++
Sbjct: 212 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 271
Query: 382 SVPGPAKDLIAQLLVKDPTRR 402
P D++ DP +R
Sbjct: 272 HAPAEMYDIMKTCWDADPLKR 292
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGIDHELTLANVVARALEFPKEP 381
+++APE I + D W+ GIF++ELF G++P+ G+ + ++
Sbjct: 228 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 287
Query: 382 SVPGPAKDLIAQLLVKDPTRR 402
P D++ DP +R
Sbjct: 288 HAPAEMYDIMKTCWDADPLKR 308
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 172 DLHVLRQRQPDKRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGH--IML 229
+L+ L ++ + F VR +A ++ L+ LH II+ DLKPEN+L++ G I +
Sbjct: 184 NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKV 243
Query: 230 TDFDLS 235
DF S
Sbjct: 244 IDFGSS 249
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 314 RSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANVV 371
R + + + Y APE+I G +G +D W+LG + EL G G D LA ++
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI 312
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGD 239
++ +++ L+++H +++RDLKP N+L+ + + + DF L+ D
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVAD 177
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 30/116 (25%)
Query: 318 FVGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKG------IDHELTL--- 367
+V T Y APEI ++ +G+ ++D W++G + E+ F G ++H L +
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 248
Query: 368 ---------ANVVAR--ALEFPKEPSVP---------GPAKDLIAQLLVKDPTRRM 403
N+ AR L P + VP A DL+ ++L +P +R+
Sbjct: 249 PSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 304
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGIDHELTLANVVARALEFPKEP 381
+++APE I + D W+ GIF++ELF G++P+ G+ + ++
Sbjct: 230 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 289
Query: 382 SVPGPAKDLIAQLLVKDPTRR 402
P D++ DP +R
Sbjct: 290 HAPAEMYDIMKTCWDADPLKR 310
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGIDHELTLANVVARALEFPKEP 381
+++APE I + D W+ GIF++ELF G++P+ G+ + ++
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 382 SVPGPAKDLIAQLLVKDPTRR 402
P D++ DP +R
Sbjct: 295 HAPAEMYDIMKTCWDADPLKR 315
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGIDHELTLANVVARALEFPKEP 381
+++APE I + D W+ GIF++ELF G++P+ G+ + ++
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 382 SVPGPAKDLIAQLLVKDPTRR 402
P D++ DP +R
Sbjct: 295 HAPAEMYDIMKTCWDADPLKR 315
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
LR +LG G G V++ + N A K + + + E+ + E ++++ L
Sbjct: 20 LRLEVKLGQGCFGEVWM-----GTWNGTTRVAIKTLKPGTM---SPEAFLQ-EAQVMKKL 70
Query: 144 DHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
H L LYA + + P + ++TE+ G L + + K + A+++ +
Sbjct: 71 RHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS-LKGDNSTSTAQ 246
++ M ++RDL N+LV + + DF L+ L DN + Q
Sbjct: 129 YVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 340 DWWTLGIFIFELFY-GTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKD 398
D W+ GI + EL G P+ G+ + L + V R P P P DL+ Q KD
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 399 PTRR 402
P R
Sbjct: 256 PEER 259
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 26/168 (15%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + LGSG G+VY + A K + + NKE
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-------- 67
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQP------DKRFHESAVRF 192
+LD ++ A++D P C L C + ++ Q P R H+ +
Sbjct: 68 ---ILDEAYV---MASVDNPH-VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGS 120
Query: 193 -----YASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ ++ + +L +++RDL NVLV++ H+ +TDF L+
Sbjct: 121 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 168
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
LR +LG G G V++ + N A K + + + E+ + E ++++
Sbjct: 15 ESLRLEVKLGQGCFGEVWM-----GTWNGTTRVAIKTLKPGTM---SPEAFLQ-EAQVMK 65
Query: 142 MLDHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
L H L LYA + + P + ++TE+ G L + + K + ++++
Sbjct: 66 KLRHEKLVQLYAVVSEEPIY--IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASG 123
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS-LKGDNSTSTAQ 246
+ ++ M ++RDL+ N+LV + + DF L+ L DN + Q
Sbjct: 124 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 170
Score = 31.6 bits (70), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 340 DWWTLGIFIFELFY-GTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKD 398
D W+ GI + EL G P+ G+ + L + V R P P P DL+ Q K+
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 252
Query: 399 PTRR 402
P R
Sbjct: 253 PEER 256
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
LR +LG G G V++ + N A K + + + E+ + E ++++
Sbjct: 18 ESLRLEVKLGQGCFGEVWM-----GTWNGTTRVAIKTLKPGTM---SPEAFLQ-EAQVMK 68
Query: 142 MLDHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
L H L LYA + + P + ++TE+ G L + + K + A+++
Sbjct: 69 KLRHEKLVQLYAVVSEEPIY--IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS-LKGDNSTSTAQ 246
+ ++ M ++RDL+ N+LV + + DF L+ L DN + Q
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 340 DWWTLGIFIFELFY-GTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKD 398
D W+ GI + EL G P+ G+ + L + V R P P P DL+ Q KD
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 399 PTRR 402
P R
Sbjct: 256 PEER 259
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 26/168 (15%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + LGSG G+VY + A K + + NKE
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-------- 65
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQP------DKRFHESAVRF 192
+LD ++ A++D P C L C + ++ Q P R H+ +
Sbjct: 66 ---ILDEAYV---MASVDNPH-VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGS 118
Query: 193 -----YASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ ++ + +L +++RDL NVLV++ H+ +TDF L+
Sbjct: 119 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
LR +LG G G V++ + N A K + + + E+ + E ++++
Sbjct: 15 ESLRLEVKLGQGCFGEVWM-----GTWNGTTRVAIKTLKPGTM---SPEAFLQ-EAQVMK 65
Query: 142 MLDHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
L H L LYA + + P + ++TE+ G L + + K + ++++
Sbjct: 66 KLRHEKLVQLYAVVSEEPIY--IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASG 123
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS-LKGDNSTSTAQ 246
+ ++ M ++RDL+ N+LV + + DF L+ L DN + Q
Sbjct: 124 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQ 170
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 340 DWWTLGIFIFELFY-GTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKD 398
D W+ GI + EL G P+ G+ + L + V R P P P DL+ Q K+
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 252
Query: 399 PTRR 402
P R
Sbjct: 253 PEER 256
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGD 239
++ +++ L+++H +++RDLKP N+L+ + + + DF L+ D
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVAD 175
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 30/133 (22%)
Query: 317 SFVGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKG------IDHEL---- 365
+V T Y APEI ++ +G+ ++D W++G + E+ F G ++H L
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 366 --------TLANVVAR--ALEFPKEPSVP---------GPAKDLIAQLLVKDPTRRMGSK 406
+ N+ AR L P + VP A DL+ ++L +P +R+ +
Sbjct: 246 SPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 407 MGATAIKRHQFFN 419
Q+++
Sbjct: 306 QALAHPYLEQYYD 318
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 67/158 (42%), Gaps = 6/158 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + LGSG G+VY + A K + RE S E
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIK--ELREATSPKANKEILDEAY 70
Query: 139 ILEMLDHPFLPTLYATLDCPRWSC-LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
++ +D+P + L C + L+ + P G L + D + + + ++
Sbjct: 71 VMASVDNPHVCRLLGI--CLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLN-WCVQI 127
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +L +++RDL NVLV++ H+ +TDF L+
Sbjct: 128 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 26/168 (15%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + LGSG G+VY + A K + + NKE
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-------- 64
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQP------DKRFHESAVRF 192
+LD ++ A++D P C L C + ++ Q P R H+ +
Sbjct: 65 ---ILDEAYV---MASVDNPH-VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGS 117
Query: 193 -----YASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ ++ + +L +++RDL NVLV++ H+ +TDF L+
Sbjct: 118 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Query: 292 RRRKKKLGNPGTPEI---VAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFI 348
+R ++ L NP + A D + V T Y APE+I G D W++G +
Sbjct: 165 KRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCIL 224
Query: 349 FELFYGTTPFKGIDHELTLA 368
E + G T F D + LA
Sbjct: 225 IEYYLGFTVFPTHDSKEHLA 244
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVL-VRSD 224
F +R A ++ ++ FLH + + DLKPEN+L V+SD
Sbjct: 115 FRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSD 155
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGD 239
++ +++ L+++H +++RDLKP N+L+ + + + DF L+ D
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 175
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 30/133 (22%)
Query: 317 SFVGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKG------IDHEL---- 365
+V T Y APEI ++ +G+ ++D W++G + E+ F G ++H L
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 366 --------TLANVVAR--ALEFPKEPSVP---------GPAKDLIAQLLVKDPTRRMGSK 406
+ N+ AR L P + VP A DL+ ++L +P +R+ +
Sbjct: 246 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 407 MGATAIKRHQFFN 419
Q+++
Sbjct: 306 QALAHPYLEQYYD 318
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 26/168 (15%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + LGSG G+VY + A K + + NKE
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-------- 66
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQP------DKRFHESAVRF 192
+LD ++ A++D P C L C + ++ Q P R H+ +
Sbjct: 67 ---ILDEAYV---MASVDNPH-VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGS 119
Query: 193 -----YASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ ++ + +L +++RDL NVLV++ H+ +TDF L+
Sbjct: 120 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGD 239
++ +++ L+++H +++RDLKP N+L+ + + + DF L+ D
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 179
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 30/133 (22%)
Query: 317 SFVGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKG------IDHEL---- 365
+V T Y APEI ++ +G+ ++D W++G + E+ F G ++H L
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 366 --------TLANVVAR--ALEFPKEPSVP---------GPAKDLIAQLLVKDPTRRMGSK 406
+ N+ AR L P + VP A DL+ ++L +P +R+ +
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 407 MGATAIKRHQFFN 419
Q+++
Sbjct: 310 QALAHPYLEQYYD 322
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 26/168 (15%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + LGSG G+VY + A K + + NKE
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-------- 63
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQP------DKRFHESAVRF 192
+LD ++ A++D P C L C + ++ Q P R H+ +
Sbjct: 64 ---ILDEAYV---MASVDNPH-VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGS 116
Query: 193 -----YASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ ++ + +L +++RDL NVLV++ H+ +TDF L+
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGD 239
++ +++ L+++H +++RDLKP N+L+ + + + DF L+ D
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 179
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 30/133 (22%)
Query: 317 SFVGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKG------IDHEL---- 365
+V T Y APEI ++ +G+ ++D W++G + E+ F G ++H L
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 366 --------TLANVVAR--ALEFPKEPSVP---------GPAKDLIAQLLVKDPTRRMGSK 406
+ N+ AR L P + VP A DL+ ++L +P +R+ +
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 407 MGATAIKRHQFFN 419
Q+++
Sbjct: 310 QALAHPYLEQYYD 322
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGD 239
++ +++ L+++H +++RDLKP N+L+ + + + DF L+ D
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 175
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 30/133 (22%)
Query: 317 SFVGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKG------IDHEL---- 365
+V T Y APEI ++ +G+ ++D W++G + E+ F G ++H L
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 366 --------TLANVVAR--ALEFPKEPSVP---------GPAKDLIAQLLVKDPTRRMGSK 406
+ N+ AR L P + VP A DL+ ++L +P +R+ +
Sbjct: 246 SPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 407 MGATAIKRHQFFN 419
Q+++
Sbjct: 306 QALAHPYLEQYYD 318
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 37/168 (22%)
Query: 85 RFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAA--KVMDKRELVSRNKESRARIEREILEM 142
R ++GSG G +YL G AA +V K E V + K + IE +I +M
Sbjct: 12 RLGRKIGSGSFGDIYL----------GTDIAAGEEVAIKLECV-KTKHPQLHIESKIYKM 60
Query: 143 LDHPF-LPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPD---------KRFHESAVRF 192
+ +PT+ RW ++ ++ V+ P ++F V
Sbjct: 61 MQGGVGIPTI-------RWCGAEGDY----NVMVMELLGPSLEDLFNFCSRKFSLKTVLL 109
Query: 193 YASEVVVALEFLHMMGIIYRDLKPENVLV---RSDGHIMLTDFDLSLK 237
A +++ +E++H I+RD+KP+N L+ + + + DF L+ K
Sbjct: 110 LADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 64/170 (37%), Gaps = 54/170 (31%)
Query: 190 VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVS 249
VR A ++ AL FLH + + DLKPEN+L + ++F+ +L ++ + + V
Sbjct: 134 VRHMAYQLCHALRFLHENQLTHTDLKPENILFVN------SEFE-TLYNEHKSCEEKSVK 186
Query: 250 DQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAE 309
+ S D FG+++ + IVA
Sbjct: 187 NTSIRVAD------------FGSAT-----------------------FDHEHHTTIVA- 210
Query: 310 PLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFK 359
T Y PE+I G D W++G +FE + G T F+
Sbjct: 211 -----------TRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 249
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 27/173 (15%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L L +L+ + +G G G+VY L + F A +++ ++ R
Sbjct: 10 LDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFA---NRQNFINEKNIYR------ 60
Query: 139 ILEMLDHPFLPTLYA-----TLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFY 193
+ +++H + T D L+ E+ P G L S+ R
Sbjct: 61 -VPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWV--SSCRL- 116
Query: 194 ASEVVVALEFLHMM---------GIIYRDLKPENVLVRSDGHIMLTDFDLSLK 237
A V L +LH I +RDL NVLV++DG +++DF LS++
Sbjct: 117 AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 7/52 (13%)
Query: 312 DVRSMSFVGTHEYLAPEIISG-------EGHGNAVDWWTLGIFIFELFYGTT 356
D ++S VGT Y+APE++ G E VD + LG+ +E+F T
Sbjct: 182 DNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCT 233
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGD 239
++ +++ L+++H +++RDLKP N+L+ + + + DF L+ D
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 30/133 (22%)
Query: 317 SFVGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKG------IDHEL---- 365
+V T Y APEI ++ +G+ ++D W++G + E+ F G ++H L
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 366 --------TLANVVAR--ALEFPKEPSVP---------GPAKDLIAQLLVKDPTRRMGSK 406
+ N+ AR L P + VP A DL+ ++L +P +R+ +
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 407 MGATAIKRHQFFN 419
Q+++
Sbjct: 310 QALAHPYLEQYYD 322
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 64/170 (37%), Gaps = 54/170 (31%)
Query: 190 VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVS 249
VR A ++ AL FLH + + DLKPEN+L + ++F+ +L ++ + + V
Sbjct: 125 VRHMAYQLCHALRFLHENQLTHTDLKPENILFVN------SEFE-TLYNEHKSCEEKSVK 177
Query: 250 DQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAE 309
+ S D FG+++ + IVA
Sbjct: 178 NTSIRVAD------------FGSAT-----------------------FDHEHHTTIVA- 201
Query: 310 PLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFK 359
T Y PE+I G D W++G +FE + G T F+
Sbjct: 202 -----------TRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 240
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGD 239
++ +++ L+++H +++RDLKP N+L+ + + + DF L+ D
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 177
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 30/132 (22%)
Query: 318 FVGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKG------IDHEL----- 365
+V T Y APEI ++ +G+ ++D W++G + E+ F G ++H L
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 248
Query: 366 -------TLANVVAR--ALEFPKEPSVP---------GPAKDLIAQLLVKDPTRRMGSKM 407
+ N+ AR L P + VP A DL+ ++L +P +R+ +
Sbjct: 249 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 308
Query: 408 GATAIKRHQFFN 419
Q+++
Sbjct: 309 ALAHPYLEQYYD 320
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGD 239
++ +++ L+++H +++RDLKP N+L+ + + + DF L+ D
Sbjct: 133 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 180
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 30/133 (22%)
Query: 317 SFVGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKG------IDHEL---- 365
+V T Y APEI ++ +G+ ++D W++G + E+ F G ++H L
Sbjct: 191 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 250
Query: 366 --------TLANVVAR--ALEFPKEPSVP---------GPAKDLIAQLLVKDPTRRMGSK 406
+ N+ AR L P + VP A DL+ ++L +P +R+ +
Sbjct: 251 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 310
Query: 407 MGATAIKRHQFFN 419
Q+++
Sbjct: 311 QALAHPYLEQYYD 323
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGD 239
++ +++ L+++H +++RDLKP N+L+ + + + DF L+ D
Sbjct: 134 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 181
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 30/133 (22%)
Query: 317 SFVGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKG------IDHEL---- 365
+V T Y APEI ++ +G+ ++D W++G + E+ F G ++H L
Sbjct: 192 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 251
Query: 366 --------TLANVVAR--ALEFPKEPSVP---------GPAKDLIAQLLVKDPTRRMGSK 406
+ N+ AR L P + VP A DL+ ++L +P +R+ +
Sbjct: 252 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 311
Query: 407 MGATAIKRHQFFN 419
Q+++
Sbjct: 312 QALAHPYLEQYYD 324
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGD 239
++ +++ L+++H +++RDLKP N+L+ + + + DF L+ D
Sbjct: 125 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 172
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 30/133 (22%)
Query: 317 SFVGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKG------IDHEL---- 365
+V T Y APEI ++ +G+ ++D W++G + E+ F G ++H L
Sbjct: 183 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 242
Query: 366 --------TLANVVAR--ALEFPKEPSVP---------GPAKDLIAQLLVKDPTRRMGSK 406
+ N+ AR L P + VP A DL+ ++L +P +R+ +
Sbjct: 243 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 302
Query: 407 MGATAIKRHQFFN 419
Q+++
Sbjct: 303 QALAHPYLEQYYD 315
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGD 239
++ +++ L+++H +++RDLKP N+L+ + + + DF L+ D
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 30/133 (22%)
Query: 317 SFVGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKG------IDHEL---- 365
+V T Y APEI ++ +G+ ++D W++G + E+ F G ++H L
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 366 --------TLANVVAR--ALEFPKEPSVP---------GPAKDLIAQLLVKDPTRRMGSK 406
+ N+ AR L P + VP A DL+ ++L +P +R+ +
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 407 MGATAIKRHQFFN 419
Q+++
Sbjct: 310 QALAHPYLEQYYD 322
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGD 239
++ +++ L+++H +++RDLKP N+L+ + + + DF L+ D
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 177
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 30/132 (22%)
Query: 318 FVGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKG------IDHEL----- 365
+V T Y APEI ++ +G+ ++D W++G + E+ F G ++H L
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 248
Query: 366 -------TLANVVAR--ALEFPKEPSVP---------GPAKDLIAQLLVKDPTRRMGSKM 407
+ N+ AR L P + VP A DL+ ++L +P +R+ +
Sbjct: 249 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 308
Query: 408 GATAIKRHQFFN 419
Q+++
Sbjct: 309 ALAHPYLAQYYD 320
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGD 239
++ +++ L+++H +++RDLKP N+L+ + + + DF L+ D
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 30/131 (22%)
Query: 319 VGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKG------IDHEL------ 365
V T Y APEI ++ +G+ ++D W++G + E+ F G ++H L
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251
Query: 366 ------TLANVVAR--ALEFPKEPSVP---------GPAKDLIAQLLVKDPTRRMGSKMG 408
+ N+ AR L P + VP A DL+ ++L +P +R+ +
Sbjct: 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311
Query: 409 ATAIKRHQFFN 419
Q+++
Sbjct: 312 LAHPYLEQYYD 322
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGD 239
++ +++ L+++H +++RDLKP N+L+ + + + DF L+ D
Sbjct: 133 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 180
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 30/131 (22%)
Query: 319 VGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKG------IDHEL------ 365
V T Y APEI ++ +G+ ++D W++G + E+ F G ++H L
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 252
Query: 366 ------TLANVVAR--ALEFPKEPSVP---------GPAKDLIAQLLVKDPTRRMGSKMG 408
+ N+ AR L P + VP A DL+ ++L +P +R+ +
Sbjct: 253 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 312
Query: 409 ATAIKRHQFFN 419
Q+++
Sbjct: 313 LAHPYLEQYYD 323
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGD 239
++ +++ L+++H +++RDLKP N+L+ + + + DF L+ D
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 30/133 (22%)
Query: 317 SFVGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKG------IDHEL---- 365
+V T Y APEI ++ +G+ ++D W++G + E+ F G ++H L
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 366 --------TLANVVAR--ALEFPKEPSVP---------GPAKDLIAQLLVKDPTRRMGSK 406
+ N+ AR L P + VP A DL+ ++L +P +R+ +
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 407 MGATAIKRHQFFN 419
Q+++
Sbjct: 310 QALAHPYLEQYYD 322
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGD 239
++ +++ L+++H +++RDLKP N+L+ + + + DF L+ D
Sbjct: 126 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 173
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 30/133 (22%)
Query: 317 SFVGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKG------IDHEL---- 365
+V T Y APEI ++ +G+ ++D W++G + E+ F G ++H L
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 243
Query: 366 --------TLANVVAR--ALEFPKEPSVP---------GPAKDLIAQLLVKDPTRRMGSK 406
+ N+ AR L P + VP A DL+ ++L +P +R+ +
Sbjct: 244 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 303
Query: 407 MGATAIKRHQFFN 419
Q+++
Sbjct: 304 QALAHPYLEQYYD 316
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 6/155 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + LGSG G+VY + A K + RE S E
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAY 71
Query: 139 ILEMLDHPFLPTLYATLDCPRWSC-LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
++ +D+P + L C + L+T+ P G L + D + + + ++
Sbjct: 72 VMASVDNPHVCRLLGI--CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQI 128
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDF 232
+ +L +++RDL NVLV++ H+ +TDF
Sbjct: 129 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 6/155 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + LGSG G+VY + A K + RE S E
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAY 69
Query: 139 ILEMLDHPFLPTLYATLDCPRWSC-LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
++ +D+P + L C + L+T+ P G L + D + + + ++
Sbjct: 70 VMASVDNPHVCRLLGI--CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQI 126
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDF 232
+ +L +++RDL NVLV++ H+ +TDF
Sbjct: 127 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 161
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGD 239
++ +++ L+++H +++RDLKP N+L+ + + + DF L+ D
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 195
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 30/133 (22%)
Query: 317 SFVGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKG------IDHEL---- 365
+V T Y APEI ++ +G+ ++D W++G + E+ F G ++H L
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 265
Query: 366 --------TLANVVAR--ALEFPKEPSVP---------GPAKDLIAQLLVKDPTRRMGSK 406
+ N+ AR L P + VP A DL+ ++L +P +R+ +
Sbjct: 266 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 325
Query: 407 MGATAIKRHQFFN 419
Q+++
Sbjct: 326 QALAHPYLEQYYD 338
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGD 239
++ +++ L+++H +++RDLKP N+L+ + + + DF L+ D
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 175
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 30/133 (22%)
Query: 317 SFVGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKG------IDHEL---- 365
+V T Y APEI ++ +G+ ++D W++G + E+ F G ++H L
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 366 --------TLANVVAR--ALEFPKEPSVP---------GPAKDLIAQLLVKDPTRRMGSK 406
+ N+ AR L P + VP A DL+ ++L +P +R+ +
Sbjct: 246 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 407 MGATAIKRHQFFN 419
Q+++
Sbjct: 306 QALAHPYLEQYYD 318
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGD 239
++ +++ L+++H +++RDLKP N+L+ + + + DF L+ D
Sbjct: 126 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 173
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 30/133 (22%)
Query: 317 SFVGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKG------IDHEL---- 365
+V T Y APEI ++ +G+ ++D W++G + E+ F G ++H L
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 243
Query: 366 --------TLANVVAR--ALEFPKEPSVP---------GPAKDLIAQLLVKDPTRRMGSK 406
+ N+ AR L P + VP A DL+ ++L +P +R+ +
Sbjct: 244 SPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 303
Query: 407 MGATAIKRHQFFN 419
Q+++
Sbjct: 304 QALAHPYLEQYYD 316
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 37/168 (22%)
Query: 85 RFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAA--KVMDKRELVSRNKESRARIEREILEM 142
R ++GSG G +YL G AA +V K E V + K + IE +I +M
Sbjct: 10 RLGRKIGSGSFGDIYL----------GTDIAAGEEVAIKLECV-KTKHPQLHIESKIYKM 58
Query: 143 LDHPF-LPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPD---------KRFHESAVRF 192
+ +PT+ RW ++ ++ V+ P ++F V
Sbjct: 59 MQGGVGIPTI-------RWCGAEGDY----NVMVMELLGPSLEDLFNFCSRKFSLKTVLL 107
Query: 193 YASEVVVALEFLHMMGIIYRDLKPENVLV---RSDGHIMLTDFDLSLK 237
A +++ +E++H I+RD+KP+N L+ + + + DF L+ K
Sbjct: 108 LADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 155
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
LR +LG G G V++ + N A K + + + E+ + E ++++ L
Sbjct: 20 LRLEVKLGQGCFGEVWM-----GTWNGTTRVAIKTLKPGTM---SPEAFLQ-EAQVMKKL 70
Query: 144 DHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
H L LYA + + P + ++ E+ G L + + K + A+++ +
Sbjct: 71 RHEKLVQLYAVVSEEPIY--IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS-LKGDNSTSTAQ 246
++ M ++RDL+ N+LV + + DF L+ L DN + Q
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQ 173
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 340 DWWTLGIFIFELFY-GTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKD 398
D W+ GI + EL G P+ G+ + L + V R P P P DL+ Q KD
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 399 PTRR 402
P R
Sbjct: 256 PEER 259
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGD 239
++ +++ L+++H +++RDLKP N+L+ + + + DF L+ D
Sbjct: 136 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 183
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 30/133 (22%)
Query: 317 SFVGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKG------IDHEL---- 365
+V T Y APEI ++ +G+ ++D W++G + E+ F G ++H L
Sbjct: 194 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 253
Query: 366 --------TLANVVAR--ALEFPKEPSVP---------GPAKDLIAQLLVKDPTRRMGSK 406
+ N+ AR L P + VP A DL+ ++L +P +R+ +
Sbjct: 254 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 313
Query: 407 MGATAIKRHQFFN 419
Q+++
Sbjct: 314 QALAHPYLEQYYD 326
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 30/48 (62%)
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGD 239
++ +++ L+++H +++RDLKP N+L+ + + + DF L+ D
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 175
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 30/133 (22%)
Query: 317 SFVGTHEYLAPEI-ISGEGHGNAVDWWTLGIFIFELFYGTTPFKG------IDHEL---- 365
+V T Y APEI ++ +G+ ++D W++G + E+ F G ++H L
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 366 --------TLANVVAR--ALEFPKEPSVP---------GPAKDLIAQLLVKDPTRRMGSK 406
+ N+ AR L P + VP A DL+ ++L +P +R+ +
Sbjct: 246 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 407 MGATAIKRHQFFN 419
Q+++
Sbjct: 306 QALAHPYLEQYYD 318
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 6/155 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + LGSG G+VY + A K + RE S E
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAY 76
Query: 139 ILEMLDHPFLPTLYATLDCPRWSC-LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
++ +D+P + L C + L+T+ P G L + D + + + ++
Sbjct: 77 VMASVDNPHVCRLLGI--CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQI 133
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDF 232
+ +L +++RDL NVLV++ H+ +TDF
Sbjct: 134 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 168
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 64/170 (37%), Gaps = 54/170 (31%)
Query: 190 VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVS 249
VR A ++ AL FLH + + DLKPEN+L + ++F+ +L ++ + + V
Sbjct: 157 VRHMAYQLCHALRFLHENQLTHTDLKPENILFVN------SEFE-TLYNEHKSCEEKSVK 209
Query: 250 DQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVAE 309
+ S D FG+++ + IVA
Sbjct: 210 NTSIRVAD------------FGSAT-----------------------FDHEHHTTIVA- 233
Query: 310 PLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFK 359
T Y PE+I G D W++G +FE + G T F+
Sbjct: 234 -----------TRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQ 272
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 136 EREILEMLDHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYA 194
E ++++ L H L LYA + + P + ++ E+ G L + + K + A
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSEEPIY--IVGEYMSKGSLLDFLKGETGKYLRLPQLVDMA 286
Query: 195 SEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS-LKGDNSTSTAQ 246
+++ + ++ M ++RDL+ N+LV + + DF L+ L DN + Q
Sbjct: 287 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Score = 31.6 bits (70), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 340 DWWTLGIFIFELFY-GTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKD 398
D W+ GI + EL G P+ G+ + L + V R P P P DL+ Q K+
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 399 PTRR 402
P R
Sbjct: 422 PEER 425
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
LR +LG G G V++ + N A K + + + E+ + E ++++ L
Sbjct: 20 LRLEVKLGQGCFGEVWM-----GTWNGTTRVAIKTLKPGTM---SPEAFLQ-EAQVMKKL 70
Query: 144 DHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
H L LYA + + P + ++ E+ G L + + K + A+++ +
Sbjct: 71 RHEKLVQLYAVVSEEPIY--IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS-LKGDNSTSTAQ 246
++ M ++RDL+ N+LV + + DF L+ L DN + Q
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 340 DWWTLGIFIFELFY-GTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKD 398
D W+ GI + EL G P+ G+ + L + V R P P P DL+ Q KD
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 399 PTRR 402
P R
Sbjct: 256 PEER 259
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 59/158 (37%), Gaps = 15/158 (9%)
Query: 90 LGSGDIGSVYLVQLKSKS-SNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFL 148
LG G G V+L + + + A K + S N E E+L L H +
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD---ASDNARKDFHREAELLTNLQHEHI 77
Query: 149 PTLYATLDCPRWSCLLTEFCPGGDLH-VLRQRQPDK----------RFHESAVRFYASEV 197
Y ++ E+ GDL+ LR PD +S + A ++
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +L ++RDL N LV + + + DF +S
Sbjct: 138 AAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMS 175
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 29/173 (16%)
Query: 190 VRFYASEVVVALEFLHMM-GIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLV 248
V+ +V+ L++LH II+ D+KPEN+L+ + + ++ + +T
Sbjct: 148 VKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN--------EQYIRRLAAEATEWQR 199
Query: 249 SDQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPK--RRRKKKLGNPGTPEI 306
S PP+G AV P + + V+ L PK + K K+ + G
Sbjct: 200 SGAPPPSG------SAVSTAPATAGNFL--------VNPLEPKNAEKLKVKIADLGNACW 245
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFK 359
V + + T +Y + E++ G G+ D W+ FEL G F+
Sbjct: 246 VHKHF----TEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFE 294
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 190 VRFYASEVVVALEFLHMMGIIYRDLKPENVLV---RSDGHIMLTDFDLSLKGDNSTSTAQ 246
V A +++ +EF+H ++RD+KP+N L+ R + + DF L+ K + TST Q
Sbjct: 105 VLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD-TSTHQ 163
Query: 247 LV 248
+
Sbjct: 164 HI 165
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 84 LRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML 143
LR +LG G G V++ + N A K + + + E+ + E ++++ L
Sbjct: 20 LRLEVKLGQGCFGEVWM-----GTWNGTTRVAIKTLKPGTM---SPEAFLQ-EAQVMKKL 70
Query: 144 DHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVALE 202
H L LYA + + P + ++ E+ G L + + K + A+++ +
Sbjct: 71 RHEKLVQLYAVVSEEPIY--IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMA 128
Query: 203 FLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS-LKGDNSTSTAQ 246
++ M ++RDL+ N+LV + + DF L+ L DN + Q
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 340 DWWTLGIFIFELFY-GTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKD 398
D W+ GI + EL G P+ G+ + L + V R P P P DL+ Q KD
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 399 PTRR 402
P R
Sbjct: 256 PEER 259
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 29/173 (16%)
Query: 190 VRFYASEVVVALEFLHMM-GIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLV 248
V+ +V+ L++LH II+ D+KPEN+L+ + + ++ + +T
Sbjct: 132 VKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN--------EQYIRRLAAEATEWQR 183
Query: 249 SDQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPK--RRRKKKLGNPGTPEI 306
S PP+G AV P + + V+ L PK + K K+ + G
Sbjct: 184 SGAPPPSGS------AVSTAPATAGNFL--------VNPLEPKNAEKLKVKIADLGNACW 229
Query: 307 VAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFK 359
V + + T +Y + E++ G G+ D W+ FEL G F+
Sbjct: 230 VHKHF----TEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFE 278
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 20/168 (11%)
Query: 125 VSRNKES---RARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCP-----GGDLHVL 176
+ +NK++ +A+IE +LE+++ Y + R C +L+ L
Sbjct: 86 IIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDL 145
Query: 177 RQRQPDKRFHESAVRFYASEVVVALEFLHM--MGIIYRDLKPENVLV----RSDGHIMLT 230
+ + + R +A ++ AL FL + II+ DLKPEN+L+ RS I +
Sbjct: 146 LRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSA--IKIV 203
Query: 231 DFDLSLK-GDNSTSTAQLVSDQSPPTGDQQPNDCAVDQPPFGNSSCII 277
DF S + G Q +SP P D A+D G CI+
Sbjct: 204 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLG---CIL 248
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 311 LDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
L R + + Y +PE++ G + A+D W+LG + E+ G F G + E+ N
Sbjct: 211 LGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN-EVDQMNK 269
Query: 371 VARALEFP 378
+ L P
Sbjct: 270 IVEVLGIP 277
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 20/168 (11%)
Query: 125 VSRNKES---RARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCP-----GGDLHVL 176
+ +NK++ +A+IE +LE+++ Y + R C +L+ L
Sbjct: 67 IIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDL 126
Query: 177 RQRQPDKRFHESAVRFYASEVVVALEFLHM--MGIIYRDLKPENVLV----RSDGHIMLT 230
+ + + R +A ++ AL FL + II+ DLKPEN+L+ RS I +
Sbjct: 127 LRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSA--IKIV 184
Query: 231 DFDLSLK-GDNSTSTAQLVSDQSPPTGDQQPNDCAVDQPPFGNSSCII 277
DF S + G Q +SP P D A+D G CI+
Sbjct: 185 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLG---CIL 229
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 311 LDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
L R + + Y +PE++ G + A+D W+LG + E+ G F G + E+ N
Sbjct: 192 LGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN-EVDQMNK 250
Query: 371 VARALEFP 378
+ L P
Sbjct: 251 IVEVLGIP 258
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 67/158 (42%), Gaps = 6/158 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + L SG G+VY + A K + RE S E
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAY 76
Query: 139 ILEMLDHPFLPTLYATLDCPRWSC-LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
++ +D+P + L C + L+T+ P G L + D + + + ++
Sbjct: 77 VMASVDNPHVCRLLGI--CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQI 133
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +L +++RDL NVLV++ H+ +TDF L+
Sbjct: 134 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 67/158 (42%), Gaps = 6/158 (3%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + L SG G+VY + A K + RE S E
Sbjct: 12 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAY 69
Query: 139 ILEMLDHPFLPTLYATLDCPRWSC-LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEV 197
++ +D+P + L C + L+T+ P G L + D + + + ++
Sbjct: 70 VMASVDNPHVCRLLGI--CLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN-WCVQI 126
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ +L +++RDL NVLV++ H+ +TDF L+
Sbjct: 127 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 35.0 bits (79), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 208 GIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPT 255
I +RDLK +N+LV+ +G + D L+++ D++T T + + T
Sbjct: 128 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 175
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 35.0 bits (79), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 208 GIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPT 255
I +RDLK +N+LV+ +G + D L+++ D++T T + + T
Sbjct: 131 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 178
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 208 GIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPT 255
I +RDLK +N+LV+ +G + D L+++ D++T T + + T
Sbjct: 129 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 176
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 208 GIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPT 255
I +RDLK +N+LV+ +G + D L+++ D++T T + + T
Sbjct: 134 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 181
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 10/157 (6%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + LGSG G V L + K G + A M K +S ++ + E +
Sbjct: 5 LKREEITLLKELGSGQFGVVKLGKWK------GQYDVAVKMIKEGSMSEDEFFQ---EAQ 55
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
+ L HP L Y ++TE+ G L + R K S + +V
Sbjct: 56 TMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCL-LNYLRSHGKGLEPSQLLEMCYDVC 114
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ FL I+RDL N LV D + ++DF ++
Sbjct: 115 EGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMT 151
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 16/166 (9%)
Query: 125 VSRNKES---RARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEFCP-----GGDLHVL 176
+ +NK++ +A+IE +LE+++ Y + R C +L+ L
Sbjct: 86 IIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDL 145
Query: 177 RQRQPDKRFHESAVRFYASEVVVALEFLHM--MGIIYRDLKPENVLVRSDGH--IMLTDF 232
+ + + R +A ++ AL FL + II+ DLKPEN+L+ + I + DF
Sbjct: 146 LRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDF 205
Query: 233 DLSLK-GDNSTSTAQLVSDQSPPTGDQQPNDCAVDQPPFGNSSCII 277
S + G Q +SP P D A+D G CI+
Sbjct: 206 GSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLG---CIL 248
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 311 LDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
L R + + Y +PE++ G + A+D W+LG + E+ G F G + E+ N
Sbjct: 211 LGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN-EVDQMNK 269
Query: 371 VARALEFP 378
+ L P
Sbjct: 270 IVEVLGIP 277
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 190 VRFYASEVVVALEFLH-MMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLV 248
V+ +V+ L++LH II+ D+KPEN+L+ D D ++ + +T
Sbjct: 142 VKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVD--------DAYVRRMAAEATEWQK 193
Query: 249 SDQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCIVPAVSCLHPKRRRKKKLGNPGTPEIVA 308
+ PP+G AV P + ++ N + P + + + K+ + G V
Sbjct: 194 AGAPPPSGS------AVSTAPAAD---LLVNPLDPRNA-----DKIRVKIADLGNACWVH 239
Query: 309 EPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGT---TPFKGIDH-- 363
+ + T +Y + E++ G G+ D W+ FEL G P G D+
Sbjct: 240 KHF----TEDIQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATGDYLFEPHSGEDYSR 295
Query: 364 -ELTLANVVARALEFPKEPSVPG 385
E +A+++ P+ ++ G
Sbjct: 296 DEDHIAHIIELLGSIPRHFALSG 318
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 26/165 (15%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + LGSG G+VY + A K + + NKE
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-------- 65
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQP------DKRFHESAVRF 192
+LD ++ A++D P C L C + ++ Q P R H+ +
Sbjct: 66 ---ILDEAYV---MASVDNPH-VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGS 118
Query: 193 -----YASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDF 232
+ ++ + +L +++RDL NVLV++ H+ +TDF
Sbjct: 119 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 65/165 (39%), Gaps = 26/165 (15%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + LGSG G+VY + A K + + NKE
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-------- 65
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQ-----------RQPDKRFHE 187
+LD ++ A++D P C L C + ++ Q R+
Sbjct: 66 ---ILDEAYV---MASVDNPH-VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGS 118
Query: 188 SAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDF 232
+ + ++ + +L +++RDL NVLV++ H+ +TDF
Sbjct: 119 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 15/106 (14%)
Query: 141 EMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQP------DKRFHESAVRF-- 192
E+LD ++ A++D P C L C + ++ Q P R H+ +
Sbjct: 70 EILDEAYV---MASVDNPH-VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQY 125
Query: 193 ---YASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ ++ + +L +++RDL NVLV++ H+ +TDF L+
Sbjct: 126 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 208 GIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPT 255
I +RDLK +N+LV+ +G + D L+++ D++T T + + T
Sbjct: 154 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 201
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 26/165 (15%)
Query: 79 LTLSDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIERE 138
L ++ + + LGSG G+VY + A K + + NKE
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE-------- 67
Query: 139 ILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQP------DKRFHESAVRF 192
+LD ++ A++D P C L C + ++ Q P R H+ +
Sbjct: 68 ---ILDEAYV---MASVDNPH-VCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGS 120
Query: 193 -----YASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDF 232
+ ++ + +L +++RDL NVLV++ H+ +TDF
Sbjct: 121 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 165
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 27/189 (14%)
Query: 83 DLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEM 142
D+ + +G G G V+ + S G A K+ R+ S +E+ E M
Sbjct: 9 DITLLECVGKGRYGEVW------RGSWQGENVAVKIFSSRDEKSWFRET----ELYNTVM 58
Query: 143 LDHPFLPTLYATLDCPRWSC----LLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVV 198
L H + A+ R S L+T + G L+ Q S +R S +
Sbjct: 59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV--SCLRIVLS-IA 115
Query: 199 VALEFLHMM--------GIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSD 250
L LH+ I +RDLK +N+LV+ +G + D L++ +S ST QL
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM--HSQSTNQLDVG 173
Query: 251 QSPPTGDQQ 259
+P G ++
Sbjct: 174 NNPRVGTKR 182
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 22/122 (18%)
Query: 136 EREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLH-VLRQRQ-------------- 180
E +L+ ++HP + LY L+ E+ G L LR+ +
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 181 ------PDKR-FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFD 233
PD+R + +A ++ +++L M +++RDL N+LV + ++DF
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFG 195
Query: 234 LS 235
LS
Sbjct: 196 LS 197
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 208 GIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPT 255
I +RDLK +N+LV+ +G + D L+++ D++T T + + T
Sbjct: 167 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 214
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 14/167 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
++L+F LG+G G V + A M K + KE+ + +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL-HVLRQR----QPDKRF----HESAVR- 191
+ H + L ++TE+C GDL + LR++ + D F ++ R
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 192 --FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIM-LTDFDLS 235
++S+V + FL I+RD+ NVL+ ++GH+ + DF L+
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLA 211
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 187 ESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVR-SDGHIMLTDF 232
E R + +VV A++ H G+++RD+K EN+L+ G L DF
Sbjct: 138 EGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDF 184
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 318 FVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFK 359
F GT Y PE IS + H W+LGI ++++ G PF+
Sbjct: 198 FDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE 240
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
LR +LG G G V++ + N A K + + + E+ + E ++++
Sbjct: 18 ESLRLEVKLGQGCFGEVWM-----GTWNGTTRVAIKTLKPGTM---SPEAFLQ-EAQVMK 68
Query: 142 MLDHPFLPTLYATL-DCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESAVRFYASEVVVA 200
L H L LYA + + P + ++ E+ G L + + K + A+++
Sbjct: 69 KLRHEKLVQLYAVVSEEPIY--IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 201 LEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS-LKGDNSTSTAQ 246
+ ++ M ++RDL+ N+LV + + DF L+ L DN + Q
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 340 DWWTLGIFIFELFY-GTTPFKGIDHELTLANVVARALEFPKEPSVPGPAKDLIAQLLVKD 398
D W+ GI + EL G P+ G+ + L + V R P P P DL+ Q KD
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 399 PTRR 402
P R
Sbjct: 256 PEER 259
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 14/167 (8%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
++L+F LG+G G V + A M K + KE+ + +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL-HVLRQRQ-----------PDKRFHESA 189
+ H + L ++TE+C GDL + LR++ +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 190 VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIM-LTDFDLS 235
+ ++S+V + FL I+RD+ NVL+ ++GH+ + DF L+
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLA 211
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 94 DIGSVYLVQLKSKSSNNGCFFAA------KVMDKRELVSRNKESRARIEREI--LEMLDH 145
D+GS Y+ NG F+A K + +++V + +S REI + LDH
Sbjct: 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDH 67
Query: 146 PFLPTLYATLDCPRWSCL------LTEFCP--------GGDLHVLRQRQPDKRFHESAVR 191
+ ++ L P S L LTE DL + ++ P E R
Sbjct: 68 DNIVKVFEILG-PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP---LLEEHAR 123
Query: 192 FYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIM-LTDFDLS 235
+ +++ L+++H +++RDLKP N+ + ++ ++ + DF L+
Sbjct: 124 LFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLA 168
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 15/74 (20%)
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDG-------------HIMLTDFDLSLKGDNST 242
++ + LH + II+RDLKP+N+LV + I+++DF L K D+
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 243 STAQLVSDQSPPTG 256
S+ + ++ + P+G
Sbjct: 183 SSFR--TNLNNPSG 194
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 22/122 (18%)
Query: 136 EREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLH-VLRQRQ-------------- 180
E +L+ ++HP + LY L+ E+ G L LR+ +
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 181 ------PDKR-FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFD 233
PD+R + +A ++ +++L M +++RDL N+LV + ++DF
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 234 LS 235
LS
Sbjct: 196 LS 197
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 183 KRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV---RSDGHIMLTDFDLSLK 237
++F V A +++ +E++H I+RD+KP+N L+ + + + DF L+ K
Sbjct: 100 RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 22/122 (18%)
Query: 136 EREILEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLH-VLRQRQ-------------- 180
E +L+ ++HP + LY L+ E+ G L LR+ +
Sbjct: 76 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 181 ------PDKR-FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFD 233
PD+R + +A ++ +++L M +++RDL N+LV + ++DF
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 234 LS 235
LS
Sbjct: 196 LS 197
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 208 GIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQ 259
I +RDLK +N+LV+ +G + D L++ +S ST QL +P G ++
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVM--HSQSTNQLDVGNNPRVGTKR 182
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 210 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 268
Query: 371 VAR 373
R
Sbjct: 269 FFR 271
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 292 RRRKKKLGNPGTPEI---VAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFI 348
+R ++ L NP + A D + V Y APE+I G D W++G +
Sbjct: 165 KRDERTLINPDIKVVDFGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCIL 224
Query: 349 FELFYGTTPFKGIDHELTLA 368
E + G T F D + LA
Sbjct: 225 IEYYLGFTVFPTHDSKEHLA 244
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVL-VRSD 224
F +R A ++ ++ FLH + + DLKPEN+L V+SD
Sbjct: 115 FRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSD 155
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 208 GIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDNSTSTAQLVSDQSPPTGDQQ 259
I +RDLK +N+LV+ +G + D L++ +S ST QL +P G ++
Sbjct: 162 AIAHRDLKSKNILVKKNGQCCIADLGLAVM--HSQSTNQLDVGNNPRVGTKR 211
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 15/159 (9%)
Query: 90 LGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEMLDHPFLP 149
LG G+ GSV LK + + A K M K + S+ + E ++ HP +
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTS-LKVAVKTM-KLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 150 TLYATLDCPRWSC-------LLTEFCPGGDLHVL----RQRQPDKRFHESAVRFYASEVV 198
L C S ++ F GDLH R K + + ++
Sbjct: 100 RLLGV--CIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157
Query: 199 VALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLK 237
+ +E+L ++RDL N ++R D + + DF LS K
Sbjct: 158 LGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKK 196
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Query: 163 LLTEFCPGGDLHV-LRQRQ----PDKRFHESAVRF-----YASEVVVALEFLHMMGIIYR 212
++ EFC G+L LR ++ P K ++ + Y+ +V +EFL I+R
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHR 168
Query: 213 DLKPENVLVRSDGHIMLTDFDLS 235
DL N+L+ + + DF L+
Sbjct: 169 DLAARNILLSEKNVVKIXDFGLA 191
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
+++APE I + D W+ G+ ++E+F G +P+ G+
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 250
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 182 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 240
Query: 371 VAR 373
R
Sbjct: 241 FFR 243
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 126 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 174
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Query: 163 LLTEFCPGGDLHV-LRQRQ----PDKRFHESAVRF-----YASEVVVALEFLHMMGIIYR 212
++ EFC G+L LR ++ P K ++ + Y+ +V +EFL I+R
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHR 168
Query: 213 DLKPENVLVRSDGHIMLTDFDLS 235
DL N+L+ + + DF L+
Sbjct: 169 DLAARNILLSEKNVVKICDFGLA 191
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
+++APE I + D W+ G+ ++E+F G +P+ G+
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 250
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 253
Query: 371 VAR 373
R
Sbjct: 254 FFR 256
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 210 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 268
Query: 371 VAR 373
R
Sbjct: 269 FFR 271
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 182 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 240
Query: 371 VAR 373
R
Sbjct: 241 FFR 243
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 126 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 174
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 324 YLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGIDHELTLANV 370
++ PE I + D W G+ ++E+F YG P+ G+ HE + V
Sbjct: 242 WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYV 289
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 183 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 241
Query: 371 VAR 373
R
Sbjct: 242 FFR 244
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 127 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Query: 136 EREILEMLDHPFLPTLYATL--DCPRWSCLLTEFCPGGDLHVLRQRQPDK------RFHE 187
E +L L HP + +L R LL ++ H+++ + K +
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 188 SAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDG 225
V+ +++ + +LH +++RDLKP N+LV +G
Sbjct: 128 GMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG 165
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 24/166 (14%)
Query: 90 LGSGDIGSVYLVQ---LKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML-DH 145
LG G G V L + L N A K++ + + S E E+++M+ H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKMIGKH 93
Query: 146 PFLPTLYA--TLDCPRWSCLLTEFCPGGDL-HVLRQRQP-------------DKRFHESA 189
+ L T D P + ++ E+ G+L L+ R+P +++
Sbjct: 94 KNIINLLGACTQDGPLY--VIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 190 VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ A +V +E+L I+RDL NVLV D + + DF L+
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
+++APE + + + D W+ G+ ++E+F G +P+ G+
Sbjct: 217 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 215 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 273
Query: 371 VAR 373
R
Sbjct: 274 FFR 276
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 159 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 207
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYASEV 197
L HP L +L D L+ ++ G+L H+ P
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKG 238
L +LH II+RD+K N+L+ + +TDF +S KG
Sbjct: 149 ARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKG 189
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 183 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 241
Query: 371 VAR 373
R
Sbjct: 242 FFR 244
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 127 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 183 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 241
Query: 371 VAR 373
R
Sbjct: 242 FFR 244
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 127 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 202 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 260
Query: 371 VAR 373
R
Sbjct: 261 FFR 263
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 146 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 194
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 210 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 268
Query: 371 VAR 373
R
Sbjct: 269 FFR 271
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Query: 140 LEMLDHPFLPTLYATLDCPRWSCLLTEFCPGGDL--HVLRQRQPDKRFHESAVRFYASEV 197
L HP L +L D L+ ++ G+L H+ P
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 198 VVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKG 238
L +LH II+RD+K N+L+ + +TDF +S KG
Sbjct: 149 ARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKG 189
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 24/166 (14%)
Query: 90 LGSGDIGSVYLVQ---LKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML-DH 145
LG G G V L + L N A K++ + + S E E+++M+ H
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKMIGKH 85
Query: 146 PFLPTLYA--TLDCPRWSCLLTEFCPGGDLHVLRQ--------------RQPDKRFHESA 189
+ L T D P + ++ E+ G+L Q P+++
Sbjct: 86 KNIINLLGACTQDGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 190 VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ A +V +E+L I+RDL NVLV D + + DF L+
Sbjct: 144 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 189
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
+++APE + + + D W+ G+ ++E+F G +P+ G+
Sbjct: 209 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 248
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 24/166 (14%)
Query: 90 LGSGDIGSVYLVQ---LKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML-DH 145
LG G G V L + L N A K++ + + S E E+++M+ H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKMIGKH 93
Query: 146 PFLPTLYA--TLDCPRWSCLLTEFCPGGDLHVLRQ--------------RQPDKRFHESA 189
+ L T D P + ++ E+ G+L Q P+++
Sbjct: 94 KNIINLLGACTQDGPLY--VIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 190 VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ A +V +E+L I+RDL NVLV D + + DF L+
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
+++APE + + + D W+ G+ ++E+F G +P+ G+
Sbjct: 217 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 167 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 225
Query: 371 VAR 373
R
Sbjct: 226 FFR 228
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 111 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 159
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 24/166 (14%)
Query: 90 LGSGDIGSVYLVQ---LKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML-DH 145
LG G G V L + L N A K++ + + S E E+++M+ H
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKMIGKH 134
Query: 146 PFLPTLYA--TLDCPRWSCLLTEFCPGGDLHVLRQ--------------RQPDKRFHESA 189
+ L T D P + ++ E+ G+L Q P+++
Sbjct: 135 KNIINLLGACTQDGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 190 VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ A +V +E+L I+RDL NVLV D + + DF L+
Sbjct: 193 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 238
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
+++APE + + + D W+ G+ ++E+F G +P+ G+
Sbjct: 258 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 297
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 168 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 226
Query: 371 VAR 373
R
Sbjct: 227 FFR 229
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 24/166 (14%)
Query: 90 LGSGDIGSVYLVQ---LKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML-DH 145
LG G G V L + L N A K++ + + S E E+++M+ H
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKMIGKH 86
Query: 146 PFLPTLYA--TLDCPRWSCLLTEFCPGGDLHVLRQ--------------RQPDKRFHESA 189
+ L T D P + ++ E+ G+L Q P+++
Sbjct: 87 KNIINLLGACTQDGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 190 VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ A +V +E+L I+RDL NVLV D + + DF L+
Sbjct: 145 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 190
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
+++APE + + + D W+ G+ ++E+F G +P+ G+
Sbjct: 210 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 249
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 168 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 226
Query: 371 VAR 373
R
Sbjct: 227 FFR 229
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 24/166 (14%)
Query: 90 LGSGDIGSVYLVQ---LKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML-DH 145
LG G G V L + L N A K++ + + S E E+++M+ H
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKMIGKH 78
Query: 146 PFLPTLYA--TLDCPRWSCLLTEFCPGGDLHVLRQ--------------RQPDKRFHESA 189
+ L T D P + ++ E+ G+L Q P+++
Sbjct: 79 KNIINLLGACTQDGPLY--VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 190 VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ A +V +E+L I+RDL NVLV D + + DF L+
Sbjct: 137 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 182
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
+++APE + + + D W+ G+ ++E+F G +P+ G+
Sbjct: 202 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 241
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 24/166 (14%)
Query: 90 LGSGDIGSVYLVQ---LKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML-DH 145
LG G G V L + L N A K++ + + S E E+++M+ H
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKMIGKH 82
Query: 146 PFLPTLYA--TLDCPRWSCLLTEFCPGGDLHVLRQ--------------RQPDKRFHESA 189
+ L T D P + ++ E+ G+L Q P+++
Sbjct: 83 KNIINLLGACTQDGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 190 VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ A +V +E+L I+RDL NVLV D + + DF L+
Sbjct: 141 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 186
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
+++APE + + + D W+ G+ ++E+F G +P+ G+
Sbjct: 206 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 245
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 24/166 (14%)
Query: 90 LGSGDIGSVYLVQ---LKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML-DH 145
LG G G V L + L N A K++ + + S E E+++M+ H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKMIGKH 93
Query: 146 PFLPTLYA--TLDCPRWSCLLTEFCPGGDLHVLRQ--------------RQPDKRFHESA 189
+ L T D P + ++ E+ G+L Q P+++
Sbjct: 94 KNIINLLGACTQDGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 190 VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ A +V +E+L I+RDL NVLV D + + DF L+
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
+++APE + + + D W+ G+ ++E+F G +P+ G+
Sbjct: 217 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 167 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 225
Query: 371 VAR 373
R
Sbjct: 226 FFR 228
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 111 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 159
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 168 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 226
Query: 371 VAR 373
R
Sbjct: 227 FFR 229
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 24/166 (14%)
Query: 90 LGSGDIGSVYLVQ---LKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML-DH 145
LG G G V L + L N A K++ + + S E E+++M+ H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML--KSDATEKDLSDLISEMEMMKMIGKH 93
Query: 146 PFLPTLYA--TLDCPRWSCLLTEFCPGGDLHVLRQ--------------RQPDKRFHESA 189
+ L T D P + ++ E+ G+L Q P+++
Sbjct: 94 KNIINLLGACTQDGPLY--VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 190 VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
+ A +V +E+L I+RDL NVLV D + + DF L+
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
+++APE + + + D W+ G+ ++E+F G +P+ G+
Sbjct: 217 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 256
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 166 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 224
Query: 371 VAR 373
R
Sbjct: 225 FFR 227
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 110 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 158
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIGGQV 254
Query: 371 VAR 373
R
Sbjct: 255 FFR 257
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIGGQV 253
Query: 371 VAR 373
R
Sbjct: 254 FFR 256
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIGGQV 254
Query: 371 VAR 373
R
Sbjct: 255 FFR 257
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIGGQV 254
Query: 371 VAR 373
R
Sbjct: 255 FFR 257
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIGGQV 253
Query: 371 VAR 373
R
Sbjct: 254 FFR 256
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIGGQV 254
Query: 371 VAR 373
R
Sbjct: 255 FFR 257
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 163 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 221
Query: 371 VAR 373
R
Sbjct: 222 FFR 224
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 107 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 155
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIGGQV 253
Query: 371 VAR 373
R
Sbjct: 254 FFR 256
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 190 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 248
Query: 371 VAR 373
R
Sbjct: 249 FFR 251
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 134 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 182
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 195 SEVVVALEFLHMMGIIYRDLKPENVLV---RSDGHI--MLTDFDLSLK 237
+ L LH + I++RDLKP N+L+ + G I M++DF L K
Sbjct: 125 QQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 163 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQV 221
Query: 371 VAR 373
R
Sbjct: 222 FFR 224
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 107 LQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDF 155
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 24/171 (14%)
Query: 90 LGSGDIGSVYL---VQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILEML-DH 145
LG G G V + V + A K++ ++ + S E E+++M+ H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML--KDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 146 PFLPTLYA--TLDCPRWSCLLTEFCPGGDL-HVLRQRQPD--------KRFHESAVRFY- 193
+ TL T D P + ++ E+ G+L LR R+P R E + F
Sbjct: 101 KNIITLLGACTQDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 194 ----ASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLSLKGDN 240
++ +E+L I+RDL NVLV + + + DF L+ +N
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
+++APE + + + D W+ G+ ++E+F G +P+ GI
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 39/221 (17%)
Query: 86 FVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVM-----------DKRELVSR-----NK 129
V +LG G +V+L +K N A K++ D+ +L+ R N
Sbjct: 23 LVRKLGWGHFSTVWL----AKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 130 ESRARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEF-CPGGDLHVLRQRQPDKRFHES 188
+ + IL++LDH P ++ F G +L L ++ +
Sbjct: 79 KEDSMGANHILKLLDH-------FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLI 131
Query: 189 AVRFYASEVVVALEFLHMM-GIIYRDLKPENVLVRS----DGHIMLTDFDLS---LKGDN 240
V+ + ++++ L+++H GII+ D+KPENVL+ + I + DL ++
Sbjct: 132 YVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191
Query: 241 STSTAQLVSDQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCI 281
T++ Q +SP P C D +++C+I I
Sbjct: 192 YTNSIQTREYRSPEVLLGAPWGCGAD---IWSTACLIFELI 229
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 319 VGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFK 359
+ T EY +PE++ G G D W+ IFEL G F+
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE 236
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 39/221 (17%)
Query: 86 FVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVM-----------DKRELVSR-----NK 129
V +LG G +V+L +K N A K++ D+ +L+ R N
Sbjct: 23 LVRKLGWGHFSTVWL----AKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 130 ESRARIEREILEMLDHPFLPTLYATLDCPRWSCLLTEF-CPGGDLHVLRQRQPDKRFHES 188
+ + IL++LDH P ++ F G +L L ++ +
Sbjct: 79 KEDSMGANHILKLLDH-------FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLI 131
Query: 189 AVRFYASEVVVALEFLHMM-GIIYRDLKPENVLVRS----DGHIMLTDFDLS---LKGDN 240
V+ + ++++ L+++H GII+ D+KPENVL+ + I + DL ++
Sbjct: 132 YVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH 191
Query: 241 STSTAQLVSDQSPPTGDQQPNDCAVDQPPFGNSSCIIPNCI 281
T++ Q +SP P C D +++C+I I
Sbjct: 192 YTNSIQTREYRSPEVLLGAPWGCGAD---IWSTACLIFELI 229
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 319 VGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELFYGTTPFK 359
+ T EY +PE++ G G D W+ IFEL G F+
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE 236
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 67/176 (38%), Gaps = 23/176 (13%)
Query: 82 SDLRFVHRLGSGDIGSVYLVQLKSKSSNNGCFFAAKVMDKRELVSRNKESRARIEREILE 141
++L+F LG+G G V + A M K + KE+ + +
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 142 MLDHPFLPTLYATLDCPRWSCLLTEFCPGGDLHVLRQRQPDKRFHESA------------ 189
+ H + L ++TE+C GDL +R+ + S
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 190 ---------VRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIM-LTDFDLS 235
+ ++S+V + FL I+RD+ NVL+ ++GH+ + DF L+
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLA 205
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 185 FHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLVRSD-GHIMLTDF 232
E R + +V+ A+ H G+++RD+K EN+L+ + G + L DF
Sbjct: 107 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 155
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 312 DVRSMSFVGTHEYLAPEIIS-GEGHGNAVDWWTLGIFIFELFYGTTPFKGIDHELTLANV 370
D F GT Y PE I HG + W+LGI ++++ G PF+ D E+ V
Sbjct: 163 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIGGQV 221
Query: 371 VAR 373
R
Sbjct: 222 FFR 224
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 13/58 (22%)
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDG-------------HIMLTDFDLSLKGDN 240
++ + LH + II+RDLKP+N+LV + I+++DF L K D+
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 13/58 (22%)
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDG-------------HIMLTDFDLSLKGDN 240
++ + LH + II+RDLKP+N+LV + I+++DF L K D+
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 13/58 (22%)
Query: 196 EVVVALEFLHMMGIIYRDLKPENVLVRSDG-------------HIMLTDFDLSLKGDN 240
++ + LH + II+RDLKP+N+LV + I+++DF L K D+
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 14/87 (16%)
Query: 163 LLTEFCPGGDLHV-LRQRQ---------PDKRFHE----SAVRFYASEVVVALEFLHMMG 208
++TEFC G+L LR ++ P+ + + + Y+ +V +EFL
Sbjct: 100 VITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 159
Query: 209 IIYRDLKPENVLVRSDGHIMLTDFDLS 235
I+RDL N+L+ + + DF L+
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLA 186
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 305 EIVAEPLDVRSMSFVGTHEYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
+I +P VR +++APE I + D W+ G+ ++E+F G +P+ G+
Sbjct: 188 DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 245
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 14/87 (16%)
Query: 163 LLTEFCPGGDLHV-LRQRQ---------PDKRFHE----SAVRFYASEVVVALEFLHMMG 208
++TEFC G+L LR ++ P+ + + + Y+ +V +EFL
Sbjct: 100 VITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 159
Query: 209 IIYRDLKPENVLVRSDGHIMLTDFDLS 235
I+RDL N+L+ + + DF L+
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLA 186
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
+++APE I + D W+ G+ ++E+F G +P+ G+
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 245
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 14/87 (16%)
Query: 163 LLTEFCPGGDLHV-LRQRQ---------PDKRFHE----SAVRFYASEVVVALEFLHMMG 208
++TEFC G+L LR ++ P+ + + + Y+ +V +EFL
Sbjct: 100 VITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 159
Query: 209 IIYRDLKPENVLVRSDGHIMLTDFDLS 235
I+RDL N+L+ + + DF L+
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLA 186
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
+++APE I + D W+ G+ ++E+F G +P+ G+
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 245
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 193 YASEVVVALEFLHMMGIIYRDLKPENVLVRSDGHIMLTDFDLS 235
Y+ +V +EFL I+RDL N+L+ + + + DF L+
Sbjct: 204 YSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLA 246
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 323 EYLAPEIISGEGHGNAVDWWTLGIFIFELF-YGTTPFKGI 361
+++APE I + + D W+ G+ ++E+F G +P+ G+
Sbjct: 266 KWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGV 305
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 32.0 bits (71), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 183 KRFHESAVRFYASEVVVALEFLHMMGIIYRDLKPENVLV-----RSDGHIMLTDFDL 234
++F V A +++ ++ +H ++YRD+KP+N L+ ++ I + DF +
Sbjct: 100 RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 156
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,226,514
Number of Sequences: 62578
Number of extensions: 535912
Number of successful extensions: 3670
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 1006
Number of HSP's gapped (non-prelim): 1944
length of query: 457
length of database: 14,973,337
effective HSP length: 102
effective length of query: 355
effective length of database: 8,590,381
effective search space: 3049585255
effective search space used: 3049585255
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)