BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012765
(457 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/296 (37%), Positives = 161/296 (54%), Gaps = 13/296 (4%)
Query: 130 KNFDFAELAAATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFL 189
K F EL A+DNF+++N++G+GG +VYKG L DG + E F
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGE--LQFQ 83
Query: 190 SELGIVAHINHPNAAKLIGFS-TENGFHLVLQFLPHGSLSSLLFGSTEC---LEWTIRYK 245
+E+ +++ H N +L GF T LV ++ +GS++S L E L+W R +
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFP 305
IALG A GL YL KA+NILL E++EA + DFGLAK L D H+
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDXHVXXA 202
Query: 306 IEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQS------LVIWAKP 359
+ GT G+++PEY G EKTDVF +GV+LLELITG+RA D R + L+ W K
Sbjct: 203 VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 262
Query: 360 LLQTSNFKELVDPRLADAYDLAEMKRAMLTASVCIHHLSTMRPQMTRVLQLLRGEG 415
LL+ + LVD L Y E+++ + A +C RP+M+ V+++L G+G
Sbjct: 263 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 318
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 158/296 (53%), Gaps = 13/296 (4%)
Query: 130 KNFDFAELAAATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFL 189
K F EL A+DNF ++N++G+GG +VYKG L DG + E F
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGE--LQFQ 75
Query: 190 SELGIVAHINHPNAAKLIGFS-TENGFHLVLQFLPHGSLSSLLFGSTEC---LEWTIRYK 245
+E+ +++ H N +L GF T LV ++ +GS++S L E L+W R +
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFP 305
IALG A GL YL KA+NILL E++EA + DFGLAK L D H+
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDXHVXXA 194
Query: 306 IEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQS------LVIWAKP 359
+ G G+++PEY G EKTDVF +GV+LLELITG+RA D R + L+ W K
Sbjct: 195 VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254
Query: 360 LLQTSNFKELVDPRLADAYDLAEMKRAMLTASVCIHHLSTMRPQMTRVLQLLRGEG 415
LL+ + LVD L Y E+++ + A +C RP+M+ V+++L G+G
Sbjct: 255 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 145/283 (51%), Gaps = 14/283 (4%)
Query: 134 FAELAAATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELG 193
+L AT+NF+ + LIG G +VYKG L DG E + I +F +E+
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDG---AKVALKRRTPESSQGIEEFETEIE 87
Query: 194 IVAHINHPNAAKLIGFSTE-NGFHLVLQFLPHGSLSSLLFGS---TECLEWTIRYKIALG 249
++ HP+ LIGF E N L+ +++ +G+L L+GS T + W R +I +G
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
A GL YL K+ NILL E++ +I+DFG++K + H+ ++GT
Sbjct: 148 AARGLHYLHTRAIIHRDV---KSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGT 204
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAV----DSRRQSLVIWAKPLLQTSN 365
GY+ PEYF+ G + EK+DV++FGV+L E++ R A+ +L WA
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 366 FKELVDPRLADAYDLAEMKRAMLTASVCIHHLSTMRPQMTRVL 408
+++VDP LAD +++ TA C+ S RP M VL
Sbjct: 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 145/283 (51%), Gaps = 14/283 (4%)
Query: 134 FAELAAATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELG 193
+L AT+NF+ + LIG G +VYKG L DG E + I +F +E+
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDG---AKVALKRRTPESSQGIEEFETEIE 87
Query: 194 IVAHINHPNAAKLIGFSTE-NGFHLVLQFLPHGSLSSLLFGS---TECLEWTIRYKIALG 249
++ HP+ LIGF E N L+ +++ +G+L L+GS T + W R +I +G
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
A GL YL K+ NILL E++ +I+DFG++K + H+ ++GT
Sbjct: 148 AARGLHYLHTRAIIHRDV---KSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAV----DSRRQSLVIWAKPLLQTSN 365
GY+ PEYF+ G + EK+DV++FGV+L E++ R A+ +L WA
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 366 FKELVDPRLADAYDLAEMKRAMLTASVCIHHLSTMRPQMTRVL 408
+++VDP LAD +++ TA C+ S RP M VL
Sbjct: 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 151/304 (49%), Gaps = 17/304 (5%)
Query: 121 SVPIVRHSWKNFDFAELAAATDNFNSE------NLIGKGGHAEVYKGCLPDGEXXXXXXX 174
S+ + + +F F EL T+NF+ N +G+GG VYKG + +
Sbjct: 4 SLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLA 63
Query: 175 XXXXXEDEERISDFLSELGIVAHINHPNAAKLIGFSTE-NGFHLVLQFLPHGSLSSLL-- 231
EE F E+ ++A H N +L+GFS++ + LV ++P+GSL L
Sbjct: 64 AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
Query: 232 FGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLA 291
T L W +R KIA G A G+ +L K++NILL E + A+ISDFGLA
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDI---KSANILLDEAFTAKISDFGLA 180
Query: 292 KWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQ 351
+ + I GT Y++PE + G + K+D+++FGV+LLE+ITG AVD R+
Sbjct: 181 RASEKFAQTVMXXRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHRE 239
Query: 352 S---LVIWAKPLLQTSNFKELVDPRLADAYDLAEMKRAMLTASVCIHHLSTMRPQMTRVL 408
L I + + ++ +D ++ DA D ++ AS C+H RP + +V
Sbjct: 240 PQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQ 298
Query: 409 QLLR 412
QLL+
Sbjct: 299 QLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 148/296 (50%), Gaps = 17/296 (5%)
Query: 129 WKNFDFAELAAATDNFNSE------NLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDE 182
+ +F F EL T+NF+ N +G+GG VYKG + + E
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 65
Query: 183 ERISDFLSELGIVAHINHPNAAKLIGFSTE-NGFHLVLQFLPHGSLSSLL--FGSTECLE 239
E F E+ ++A H N +L+GFS++ + LV ++P+GSL L T L
Sbjct: 66 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLS 125
Query: 240 WTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWS 299
W +R KIA G A G+ +L K++NILL E + A+ISDFGLA+
Sbjct: 126 WHMRCKIAQGAANGINFLHENHHIHRDI---KSANILLDEAFTAKISDFGLARASEKFAQ 182
Query: 300 HHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQS---LVIW 356
+ I GT Y++PE + G + K+D+++FGV+LLE+ITG AVD R+ L I
Sbjct: 183 XVMXXRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 241
Query: 357 AKPLLQTSNFKELVDPRLADAYDLAEMKRAMLTASVCIHHLSTMRPQMTRVLQLLR 412
+ + ++ +D ++ DA D ++ AS C+H RP + +V QLL+
Sbjct: 242 EEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 151/304 (49%), Gaps = 17/304 (5%)
Query: 121 SVPIVRHSWKNFDFAELAAATDNFNSE------NLIGKGGHAEVYKGCLPDGEXXXXXXX 174
S+ + + +F F EL T+NF+ N +G+GG VYKG + +
Sbjct: 4 SLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLA 63
Query: 175 XXXXXEDEERISDFLSELGIVAHINHPNAAKLIGFSTE-NGFHLVLQFLPHGSLSSLL-- 231
EE F E+ ++A H N +L+GFS++ + LV ++P+GSL L
Sbjct: 64 AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
Query: 232 FGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLA 291
T L W +R KIA G A G+ +L K++NILL E + A+ISDFGLA
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDI---KSANILLDEAFTAKISDFGLA 180
Query: 292 KWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQ 351
+ + I GT Y++PE + G + K+D+++FGV+LLE+ITG AVD R+
Sbjct: 181 RASEKFAQTVMXSRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHRE 239
Query: 352 S---LVIWAKPLLQTSNFKELVDPRLADAYDLAEMKRAMLTASVCIHHLSTMRPQMTRVL 408
L I + + ++ +D ++ DA D ++ AS C+H RP + +V
Sbjct: 240 PQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQ 298
Query: 409 QLLR 412
QLL+
Sbjct: 299 QLLQ 302
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 141/296 (47%), Gaps = 17/296 (5%)
Query: 129 WKNFDFAELAAATDNFNSE------NLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDE 182
+ +F F EL T+NF+ N G+GG VYKG + + E
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 62
Query: 183 ERISDFLSELGIVAHINHPNAAKLIGFSTE-NGFHLVLQFLPHGSLSSLL--FGSTECLE 239
E F E+ + A H N +L+GFS++ + LV + P+GSL L T L
Sbjct: 63 ELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLS 122
Query: 240 WTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWS 299
W R KIA G A G+ +L K++NILL E + A+ISDFGLA+
Sbjct: 123 WHXRCKIAQGAANGINFLHENHHIHRDI---KSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 300 HHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQS---LVIW 356
I GT Y +PE + G + K+D+++FGV+LLE+ITG AVD R+ L I
Sbjct: 180 XVXXSRIVGTTAYXAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 238
Query: 357 AKPLLQTSNFKELVDPRLADAYDLAEMKRAMLTASVCIHHLSTMRPQMTRVLQLLR 412
+ + ++ +D + DA D ++ AS C+H RP + +V QLL+
Sbjct: 239 EEIEDEEKTIEDYIDKKXNDA-DSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 20/229 (8%)
Query: 132 FDFAELAAATDN-FNSENLIGKGGHAEVYKGCL-PDGEXXXXXXXXXXXXEDE----ERI 185
F + L DN E IGKGG V+KG L D E E E+
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 186 SDFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYK 245
+F E+ I++++NHPN KL G N +V++F+P G L L ++W+++ +
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGL-MHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLR 126
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYE-----AQISDFGLAKWLPDNWSH 300
+ L IA G++Y+ ++ NI L E A+++DFGL++ S
Sbjct: 127 LMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSV 180
Query: 301 HIVFPIEGTFGYLSPEYF--MHGIVDEKTDVFAFGVLLLELITGRRAVD 347
H V + G F +++PE EK D ++F ++L ++TG D
Sbjct: 181 HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 21/200 (10%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
+G G + EVY G + ED + +FL E ++ I HPN +L+G
Sbjct: 40 LGGGQYGEVYVGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 210 ST-ENGFHLVLQFLPHGSLSSLLFGSTEC----LEWTIRYKIALGIAEGLQYLXXXXXXX 264
T E F++V +++P+G+L L EC + + +A I+ ++YL
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYL---RECNREEVTAVVLLYMATQISSAMEYLEKKNFIH 153
Query: 265 XXXXXXKASNILLSEDYEAQISDFGLAKWLP-DNWSHH--IVFPIEGTFGYLSPEYFMHG 321
A N L+ E++ +++DFGL++ + D ++ H FPI+ T +PE +
Sbjct: 154 RDLA---ARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 206
Query: 322 IVDEKTDVFAFGVLLLELIT 341
K+DV+AFGVLL E+ T
Sbjct: 207 TFSIKSDVWAFGVLLWEIAT 226
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 23/219 (10%)
Query: 131 NFDFAELAAATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLS 190
N+D E+ + ++ +G G + EVY+G + ED + +FL
Sbjct: 4 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLK 58
Query: 191 ELGIVAHINHPNAAKLIGFST-ENGFHLVLQFLPHGSLSSLLFGSTEC----LEWTIRYK 245
E ++ I HPN +L+G T E F+++++F+ +G+L L EC + +
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLY 115
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-DNWSHH--I 302
+A I+ ++YL A N L+ E++ +++DFGL++ + D ++ H
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLA---ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
FPI+ T +PE + K+DV+AFGVLL E+ T
Sbjct: 173 KFPIKWT----APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 21/200 (10%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
+G G + EVY+G + ED + +FL E ++ I HPN +L+G
Sbjct: 26 LGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 210 ST-ENGFHLVLQFLPHGSLSSLLFGSTEC----LEWTIRYKIALGIAEGLQYLXXXXXXX 264
T E F+++++F+ +G+L L EC + + +A I+ ++YL
Sbjct: 83 CTREPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 265 XXXXXXKASNILLSEDYEAQISDFGLAKWLP-DNWSHH--IVFPIEGTFGYLSPEYFMHG 321
A N L+ E++ +++DFGL++ + D ++ H FPI+ T +PE +
Sbjct: 140 RDLA---ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 192
Query: 322 IVDEKTDVFAFGVLLLELIT 341
K+DV+AFGVLL E+ T
Sbjct: 193 KFSIKSDVWAFGVLLWEIAT 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 23/219 (10%)
Query: 131 NFDFAELAAATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLS 190
N+D E+ + ++ +G G + EVY+G + ED + +FL
Sbjct: 4 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLK 58
Query: 191 ELGIVAHINHPNAAKLIGFST-ENGFHLVLQFLPHGSLSSLLFGSTEC----LEWTIRYK 245
E ++ I HPN +L+G T E F+++++F+ +G+L L EC + +
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLY 115
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-DNWSHH--I 302
+A I+ ++YL A N L+ E++ +++DFGL++ + D ++ H
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLA---ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
FPI+ T +PE + K+DV+AFGVLL E+ T
Sbjct: 173 KFPIKWT----APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 84/162 (51%), Gaps = 6/162 (3%)
Query: 183 ERISDFLSELGIVAHINHPNAAKLIGFSTEN-GFHLVLQFLPHGSLSSLLF--GSTECLE 239
ER+++FL E+ I+ + HPN +G T+ +V ++L GSL LL G+ E L+
Sbjct: 76 ERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLD 135
Query: 240 WTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWS 299
R +A +A+G+ YL K+ N+L+ + Y ++ DFGL++ +
Sbjct: 136 ERRRLSMAYDVAKGMNYLHNRNPPIVHRNL-KSPNLLVDKKYTVKVCDFGLSRLKASTFL 194
Query: 300 HHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
GT +++PE +EK+DV++FGV+L EL T
Sbjct: 195 SSKS--AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 117/303 (38%), Gaps = 61/303 (20%)
Query: 132 FDFAELAAATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSE 191
DFAEL E +IG GG +VY+ E + + I + E
Sbjct: 4 IDFAELTL-------EEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQE 56
Query: 192 LGIVAHINHPNAAKLIGFS-TENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGI 250
+ A + HPN L G E LV++F G L+ +L G + + + A+ I
Sbjct: 57 AKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW--AVQI 114
Query: 251 AEGLQYLXXXXXXXXXXXXXKASNILLSEDYE--------AQISDFGLAKWLPDNWSHHI 302
A G+ YL K+SNIL+ + E +I+DFGLA+ W
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTT 170
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR---RAVDSRRQSLVIWAKP 359
G + +++PE + + +DV+++GVLL EL+TG R +D
Sbjct: 171 KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG----------- 219
Query: 360 LLQTSNFKELVDPRLADAYDLAEMKRAMLTASVCIHHLSTM-----------RPQMTRVL 408
LA AY +A K A+ S C + + RP T +L
Sbjct: 220 --------------LAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNIL 265
Query: 409 QLL 411
L
Sbjct: 266 DQL 268
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 20/229 (8%)
Query: 132 FDFAELAAATDN-FNSENLIGKGGHAEVYKGCL-PDGEXXXXXXXXXXXXEDE----ERI 185
F + L DN E IGKGG V+KG L D E E E+
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 186 SDFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYK 245
+F E+ I++++NHPN KL G N +V++F+P G L L ++W+++ +
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGL-MHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLR 126
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYE-----AQISDFGLAKWLPDNWSH 300
+ L IA G++Y+ ++ NI L E A+++DFG ++ S
Sbjct: 127 LMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSV 180
Query: 301 HIVFPIEGTFGYLSPEYF--MHGIVDEKTDVFAFGVLLLELITGRRAVD 347
H V + G F +++PE EK D ++F ++L ++TG D
Sbjct: 181 HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 20/229 (8%)
Query: 132 FDFAELAAATDN-FNSENLIGKGGHAEVYKGCL-PDGEXXXXXXXXXXXXEDE----ERI 185
F + L DN E IGKGG V+KG L D E E E+
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 186 SDFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYK 245
+F E+ I++++NHPN KL G N +V++F+P G L L ++W+++ +
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGL-MHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLR 126
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYE-----AQISDFGLAKWLPDNWSH 300
+ L IA G++Y+ ++ NI L E A+++DF L++ S
Sbjct: 127 LMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSV 180
Query: 301 HIVFPIEGTFGYLSPEYF--MHGIVDEKTDVFAFGVLLLELITGRRAVD 347
H V + G F +++PE EK D ++F ++L ++TG D
Sbjct: 181 HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 23/219 (10%)
Query: 131 NFDFAELAAATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLS 190
N+D E+ + ++ +G G + EVY+G + ED + +FL
Sbjct: 9 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLK 63
Query: 191 ELGIVAHINHPNAAKLIGFST-ENGFHLVLQFLPHGSLSSLLFGSTEC----LEWTIRYK 245
E ++ I HPN +L+G T E F+++ +F+ +G+L L EC + +
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLY 120
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-DNWSHH--I 302
+A I+ ++YL A N L+ E++ +++DFGL++ + D ++ H
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLA---ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
FPI+ T +PE + K+DV+AFGVLL E+ T
Sbjct: 178 KFPIKWT----APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 84/162 (51%), Gaps = 6/162 (3%)
Query: 183 ERISDFLSELGIVAHINHPNAAKLIGFSTEN-GFHLVLQFLPHGSLSSLLF--GSTECLE 239
ER+++FL E+ I+ + HPN +G T+ +V ++L GSL LL G+ E L+
Sbjct: 76 ERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLD 135
Query: 240 WTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWS 299
R +A +A+G+ YL K+ N+L+ + Y ++ DFGL++ +
Sbjct: 136 ERRRLSMAYDVAKGMNYLHNRNPPIVHRDL-KSPNLLVDKKYTVKVCDFGLSRLKASXFL 194
Query: 300 HHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
GT +++PE +EK+DV++FGV+L EL T
Sbjct: 195 XSKX--AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 23/219 (10%)
Query: 131 NFDFAELAAATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLS 190
N+D E+ + ++ +G G + EVY+G + ED + +FL
Sbjct: 4 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLK 58
Query: 191 ELGIVAHINHPNAAKLIGFST-ENGFHLVLQFLPHGSLSSLLFGSTEC----LEWTIRYK 245
E ++ I HPN +L+G T E F+++ +F+ +G+L L EC + +
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLY 115
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-DNWSHH--I 302
+A I+ ++YL A N L+ E++ +++DFGL++ + D ++ H
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLA---ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
FPI+ T +PE + K+DV+AFGVLL E+ T
Sbjct: 173 KFPIKWT----APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 21/200 (10%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
+G G + EVY+G + ED + +FL E ++ I HPN +L+G
Sbjct: 26 LGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 210 ST-ENGFHLVLQFLPHGSLSSLLFGSTEC----LEWTIRYKIALGIAEGLQYLXXXXXXX 264
T E F+++ +F+ +G+L L EC + + +A I+ ++YL
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 265 XXXXXXKASNILLSEDYEAQISDFGLAKWLP-DNWSHH--IVFPIEGTFGYLSPEYFMHG 321
A N L+ E++ +++DFGL++ + D ++ H FPI+ T +PE +
Sbjct: 140 RDLA---ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 192
Query: 322 IVDEKTDVFAFGVLLLELIT 341
K+DV+AFGVLL E+ T
Sbjct: 193 KFSIKSDVWAFGVLLWEIAT 212
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 23/219 (10%)
Query: 131 NFDFAELAAATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLS 190
N+D E+ + ++ +G G + EVY+G + ED + +FL
Sbjct: 9 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLK 63
Query: 191 ELGIVAHINHPNAAKLIGFST-ENGFHLVLQFLPHGSLSSLLFGSTEC----LEWTIRYK 245
E ++ I HPN +L+G T E F+++ +F+ +G+L L EC + +
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLY 120
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-DNWSHH--I 302
+A I+ ++YL A N L+ E++ +++DFGL++ + D ++ H
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLA---ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
FPI+ T +PE + K+DV+AFGVLL E+ T
Sbjct: 178 KFPIKWT----APESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 23/223 (10%)
Query: 127 HSWKNFDFAELAAATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERIS 186
H N+D E+ + ++ +G G + EVY+G + ED +
Sbjct: 2 HMSPNYDKWEMERT--DITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE 56
Query: 187 DFLSELGIVAHINHPNAAKLIGFST-ENGFHLVLQFLPHGSLSSLLFGSTEC----LEWT 241
+FL E ++ I HPN +L+G T E F+++ +F+ +G+L L EC +
Sbjct: 57 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAV 113
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-DNWSH 300
+ +A I+ ++YL A N L+ E++ +++DFGL++ + D ++
Sbjct: 114 VLLYMATQISSAMEYLEKKNFIHRDLA---ARNCLVGENHLVKVADFGLSRLMTGDTYTA 170
Query: 301 H--IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
H FPI+ T +PE + K+DV+AFGVLL E+ T
Sbjct: 171 HAGAKFPIKWT----APESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 23/219 (10%)
Query: 131 NFDFAELAAATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLS 190
N+D E+ + ++ +G G + EVY+G + ED + +FL
Sbjct: 4 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLK 58
Query: 191 ELGIVAHINHPNAAKLIGFST-ENGFHLVLQFLPHGSLSSLLFGSTEC----LEWTIRYK 245
E ++ I HPN +L+G T E F+++ +F+ +G+L L EC + +
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLY 115
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-DNWSHH--I 302
+A I+ ++YL A N L+ E++ +++DFGL++ + D ++ H
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLA---ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
FPI+ T +PE + K+DV+AFGVLL E+ T
Sbjct: 173 KFPIKWT----APESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 23/219 (10%)
Query: 131 NFDFAELAAATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLS 190
N+D E+ + ++ +G G + EVY+G + ED + +FL
Sbjct: 6 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLK 60
Query: 191 ELGIVAHINHPNAAKLIGFST-ENGFHLVLQFLPHGSLSSLLFGSTEC----LEWTIRYK 245
E ++ I HPN +L+G T E F+++ +F+ +G+L L EC + +
Sbjct: 61 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLY 117
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-DNWSHH--I 302
+A I+ ++YL A N L+ E++ +++DFGL++ + D ++ H
Sbjct: 118 MATQISSAMEYLEKKNFIHRDLA---ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 174
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
FPI+ T +PE + K+DV+AFGVLL E+ T
Sbjct: 175 KFPIKWT----APESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 107/227 (47%), Gaps = 23/227 (10%)
Query: 123 PIVRHSWKNFDFAELAAATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDE 182
P V N+D E+ + ++ +G G + EVY+G + ED
Sbjct: 200 PTVYGVSPNYDKWEMERT--DITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDT 254
Query: 183 ERISDFLSELGIVAHINHPNAAKLIGFST-ENGFHLVLQFLPHGSLSSLLFGSTEC---- 237
+ +FL E ++ I HPN +L+G T E F+++ +F+ +G+L L EC
Sbjct: 255 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQE 311
Query: 238 LEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-D 296
+ + +A I+ ++YL A N L+ E++ +++DFGL++ + D
Sbjct: 312 VNAVVLLYMATQISSAMEYLEKKNFIHRNLA---ARNCLVGENHLVKVADFGLSRLMTGD 368
Query: 297 NWSHH--IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
++ H FPI+ T +PE + K+DV+AFGVLL E+ T
Sbjct: 369 TYTAHAGAKFPIKWT----APESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 21/200 (10%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
+G G + EVY+G + ED + +FL E ++ I HPN +L+G
Sbjct: 21 LGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 210 ST-ENGFHLVLQFLPHGSLSSLLFGSTEC----LEWTIRYKIALGIAEGLQYLXXXXXXX 264
T E F+++ +F+ +G+L L EC + + +A I+ ++YL
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 265 XXXXXXKASNILLSEDYEAQISDFGLAKWLP-DNWSHH--IVFPIEGTFGYLSPEYFMHG 321
A N L+ E++ +++DFGL++ + D ++ H FPI+ T +PE +
Sbjct: 135 RDLA---ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 187
Query: 322 IVDEKTDVFAFGVLLLELIT 341
K+DV+AFGVLL E+ T
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT 207
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 21/200 (10%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
+G G + EVY+G + ED + +FL E ++ I HPN +L+G
Sbjct: 21 LGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 210 ST-ENGFHLVLQFLPHGSLSSLLFGSTEC----LEWTIRYKIALGIAEGLQYLXXXXXXX 264
T E F+++ +F+ +G+L L EC + + +A I+ ++YL
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 265 XXXXXXKASNILLSEDYEAQISDFGLAKWLP-DNWSHH--IVFPIEGTFGYLSPEYFMHG 321
A N L+ E++ +++DFGL++ + D ++ H FPI+ T +PE +
Sbjct: 135 RDLA---ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 187
Query: 322 IVDEKTDVFAFGVLLLELIT 341
K+DV+AFGVLL E+ T
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 21/200 (10%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
+G G + EVY+G + ED + +FL E ++ I HPN +L+G
Sbjct: 25 LGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 210 ST-ENGFHLVLQFLPHGSLSSLLFGSTEC----LEWTIRYKIALGIAEGLQYLXXXXXXX 264
T E F+++ +F+ +G+L L EC + + +A I+ ++YL
Sbjct: 82 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 138
Query: 265 XXXXXXKASNILLSEDYEAQISDFGLAKWLP-DNWSHH--IVFPIEGTFGYLSPEYFMHG 321
A N L+ E++ +++DFGL++ + D ++ H FPI+ T +PE +
Sbjct: 139 RDLA---ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 191
Query: 322 IVDEKTDVFAFGVLLLELIT 341
K+DV+AFGVLL E+ T
Sbjct: 192 KFSIKSDVWAFGVLLWEIAT 211
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 21/200 (10%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
+G G + EVY+G + ED + +FL E ++ I HPN +L+G
Sbjct: 228 LGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 210 ST-ENGFHLVLQFLPHGSLSSLLFGSTEC----LEWTIRYKIALGIAEGLQYLXXXXXXX 264
T E F+++ +F+ +G+L L EC + + +A I+ ++YL
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 341
Query: 265 XXXXXXKASNILLSEDYEAQISDFGLAKWLP-DNWSHH--IVFPIEGTFGYLSPEYFMHG 321
A N L+ E++ +++DFGL++ + D ++ H FPI+ T +PE +
Sbjct: 342 RNLA---ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 394
Query: 322 IVDEKTDVFAFGVLLLELIT 341
K+DV+AFGVLL E+ T
Sbjct: 395 KFSIKSDVWAFGVLLWEIAT 414
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 21/200 (10%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
+G G + EVY+G + ED + +FL E ++ I HPN +L+G
Sbjct: 34 LGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 210 ST-ENGFHLVLQFLPHGSLSSLLFGSTEC----LEWTIRYKIALGIAEGLQYLXXXXXXX 264
T E F+++ +F+ +G+L L EC + + +A I+ ++YL
Sbjct: 91 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 147
Query: 265 XXXXXXKASNILLSEDYEAQISDFGLAKWLP-DNWSHH--IVFPIEGTFGYLSPEYFMHG 321
A N L+ E++ +++DFGL++ + D ++ H FPI+ T +PE +
Sbjct: 148 RDLA---ARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 200
Query: 322 IVDEKTDVFAFGVLLLELIT 341
K+DV+AFGVLL E+ T
Sbjct: 201 KFSIKSDVWAFGVLLWEIAT 220
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 21/200 (10%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
+G G + EVY+G + ED + +FL E ++ I HPN +L+G
Sbjct: 19 LGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 210 ST-ENGFHLVLQFLPHGSLSSLLFGSTEC----LEWTIRYKIALGIAEGLQYLXXXXXXX 264
T E F+++ +F+ +G+L L EC + + +A I+ ++YL
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 265 XXXXXXKASNILLSEDYEAQISDFGLAKWLP-DNWSHH--IVFPIEGTFGYLSPEYFMHG 321
A N L+ E++ +++DFGL++ + D ++ H FPI+ T +PE +
Sbjct: 133 RDLA---ARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWT----APESLAYN 185
Query: 322 IVDEKTDVFAFGVLLLELIT 341
K+DV+AFGVLL E+ T
Sbjct: 186 KFSIKSDVWAFGVLLWEIAT 205
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 23/219 (10%)
Query: 131 NFDFAELAAATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLS 190
N+D E+ + ++ +G G + EVY+G + ED + +FL
Sbjct: 5 NYDKWEMERT--DITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLK 59
Query: 191 ELGIVAHINHPNAAKLIGFST-ENGFHLVLQFLPHGSLSSLLFGSTEC----LEWTIRYK 245
E ++ I HPN +L+G T E F+++++F+ +G+L L EC + +
Sbjct: 60 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLY 116
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-DNWSHH--I 302
+A I+ ++YL A N L+ E++ +++DFGL++ + D + H
Sbjct: 117 MATQISSAMEYLEKKNFIHRDLA---ARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 173
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
FPI+ T +PE + K+DV+AFGVLL E+ T
Sbjct: 174 KFPIKWT----APESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 107/227 (47%), Gaps = 23/227 (10%)
Query: 123 PIVRHSWKNFDFAELAAATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDE 182
P V N+D E+ + ++ +G G + EVY+G + ED
Sbjct: 242 PTVYGVSPNYDKWEMERT--DITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDT 296
Query: 183 ERISDFLSELGIVAHINHPNAAKLIGFST-ENGFHLVLQFLPHGSLSSLLFGSTEC---- 237
+ +FL E ++ I HPN +L+G T E F+++ +F+ +G+L L EC
Sbjct: 297 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQE 353
Query: 238 LEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-D 296
+ + +A I+ ++YL A N L+ E++ +++DFGL++ + D
Sbjct: 354 VNAVVLLYMATQISSAMEYLEKKNFIHRNLA---ARNCLVGENHLVKVADFGLSRLMTGD 410
Query: 297 NWSHH--IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
++ H FPI+ T +PE + K+DV+AFGVLL E+ T
Sbjct: 411 TYTAHAGAKFPIKWT----APESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 21/200 (10%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
+G G + EVY+G + ED + +FL E ++ I HPN +L+G
Sbjct: 19 LGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 210 ST-ENGFHLVLQFLPHGSLSSLLFGSTEC----LEWTIRYKIALGIAEGLQYLXXXXXXX 264
T E F+++++F+ +G+L L EC + + +A I+ ++YL
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 265 XXXXXXKASNILLSEDYEAQISDFGLAKWLP-DNWSHH--IVFPIEGTFGYLSPEYFMHG 321
A N L+ E++ +++DFGL++ + D + H FPI+ T +PE +
Sbjct: 133 RDLA---ARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT----APESLAYN 185
Query: 322 IVDEKTDVFAFGVLLLELIT 341
K+DV+AFGVLL E+ T
Sbjct: 186 KFSIKSDVWAFGVLLWEIAT 205
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 21/200 (10%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
+G G + EVY+G + ED + +FL E ++ I HPN +L+G
Sbjct: 26 LGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 210 ST-ENGFHLVLQFLPHGSLSSLLFGSTEC----LEWTIRYKIALGIAEGLQYLXXXXXXX 264
T E F+++ +F+ +G+L L EC + + +A I+ ++YL
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 265 XXXXXXKASNILLSEDYEAQISDFGLAKWLP-DNWSHH--IVFPIEGTFGYLSPEYFMHG 321
A N L+ E++ +++DFGL++ + D + H FPI+ T +PE +
Sbjct: 140 RDLA---ARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT----APESLAYN 192
Query: 322 IVDEKTDVFAFGVLLLELIT 341
K+DV+AFGVLL E+ T
Sbjct: 193 KFSIKSDVWAFGVLLWEIAT 212
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 21/200 (10%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
+G G EVY+G + ED + +FL E ++ I HPN +L+G
Sbjct: 19 LGGGQFGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 210 ST-ENGFHLVLQFLPHGSLSSLLFGSTEC----LEWTIRYKIALGIAEGLQYLXXXXXXX 264
T E F+++ +F+ +G+L L EC + + +A I+ ++YL
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 265 XXXXXXKASNILLSEDYEAQISDFGLAKWLP-DNWSHH--IVFPIEGTFGYLSPEYFMHG 321
A N L+ E++ +++DFGL++ + D + H FPI+ T +PE +
Sbjct: 133 RDLA---ARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT----APESLAYN 185
Query: 322 IVDEKTDVFAFGVLLLELIT 341
K+DV+AFGVLL E+ T
Sbjct: 186 KFSIKSDVWAFGVLLWEIAT 205
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 23/223 (10%)
Query: 127 HSWKNFDFAELAAATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERIS 186
H N+D E+ + ++ +G G + EVY+G + ED +
Sbjct: 2 HMSPNYDKWEMERT--DITMKHKLGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVE 56
Query: 187 DFLSELGIVAHINHPNAAKLIGFST-ENGFHLVLQFLPHGSLSSLLFGSTEC----LEWT 241
+FL E ++ I HPN +L+G T E F+++ +F+ +G+L L EC +
Sbjct: 57 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAV 113
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-DNWS- 299
+ +A I+ ++YL A N L+ E++ +++DFGL++ + D ++
Sbjct: 114 VLLYMATQISSAMEYLEKKNFIHRDLA---ARNCLVGENHLVKVADFGLSRLMTGDTYTA 170
Query: 300 -HHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
FPI+ T +PE + K+DV+AFGVLL E+ T
Sbjct: 171 PAGAKFPIKWT----APESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 21/200 (10%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
+G G + EVY+G + ED + +FL E ++ I HPN +L+G
Sbjct: 22 LGGGQYGEVYEGVW---KKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 210 ST-ENGFHLVLQFLPHGSLSSLLFGSTEC----LEWTIRYKIALGIAEGLQYLXXXXXXX 264
T E F+++ +F+ +G+L L EC + + +A I+ ++YL
Sbjct: 79 CTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 265 XXXXXXKASNILLSEDYEAQISDFGLAKWLP-DNWS--HHIVFPIEGTFGYLSPEYFMHG 321
A N L+ E++ +++DFGL++ + D ++ FPI+ T +PE +
Sbjct: 136 RDLA---ARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWT----APESLAYN 188
Query: 322 IVDEKTDVFAFGVLLLELIT 341
K+DV+AFGVLL E+ T
Sbjct: 189 KFSIKSDVWAFGVLLWEIAT 208
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 24/230 (10%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYK 245
DF+ E ++ ++HP +L G E LV +F+ HG LS L
Sbjct: 51 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG 110
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNW---SHHI 302
+ L + EG+ YL A N L+ E+ ++SDFG+ +++ D+ S
Sbjct: 111 MCLDVCEGMAYLEEACVIHRDLA---ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 167
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT-GRRAVDSRRQSLVIWAKPLL 361
FP++ + SPE F K+DV++FGVL+ E+ + G+ ++R S V+
Sbjct: 168 KFPVK----WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV-----E 218
Query: 362 QTSNFKELVDPRLADAYDLAEMKRAMLTASVCIHHLSTMRPQMTRVLQLL 411
S L PRLA + M C RP +R+L+ L
Sbjct: 219 DISTGFRLYKPRLASTHVYQIMNH-------CWRERPEDRPAFSRLLRQL 261
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 24/230 (10%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYK 245
DF+ E ++ ++HP +L G E LV +F+ HG LS L
Sbjct: 48 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG 107
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNW---SHHI 302
+ L + EG+ YL A N L+ E+ ++SDFG+ +++ D+ S
Sbjct: 108 MCLDVCEGMAYLEEACVIHRDLA---ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 164
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT-GRRAVDSRRQSLVIWAKPLL 361
FP++ + SPE F K+DV++FGVL+ E+ + G+ ++R S V+
Sbjct: 165 KFPVK----WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV-----E 215
Query: 362 QTSNFKELVDPRLADAYDLAEMKRAMLTASVCIHHLSTMRPQMTRVLQLL 411
S L PRLA + M C RP +R+L+ L
Sbjct: 216 DISTGFRLYKPRLASTHVYQIMNH-------CWKERPEDRPAFSRLLRQL 258
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 24/230 (10%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYK 245
DF+ E ++ ++HP +L G E LV +F+ HG LS L
Sbjct: 48 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG 107
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNW---SHHI 302
+ L + EG+ YL A N L+ E+ ++SDFG+ +++ D+ S
Sbjct: 108 MCLDVCEGMAYLEEASVIHRDLA---ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 164
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT-GRRAVDSRRQSLVIWAKPLL 361
FP++ + SPE F K+DV++FGVL+ E+ + G+ ++R S V+
Sbjct: 165 KFPVK----WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV-----E 215
Query: 362 QTSNFKELVDPRLADAYDLAEMKRAMLTASVCIHHLSTMRPQMTRVLQLL 411
S L PRLA + M C RP +R+L+ L
Sbjct: 216 DISTGFRLYKPRLASTHVYQIMNH-------CWKERPEDRPAFSRLLRQL 258
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 24/230 (10%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYK 245
DF+ E ++ ++HP +L G E LV +F+ HG LS L
Sbjct: 46 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG 105
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNW---SHHI 302
+ L + EG+ YL A N L+ E+ ++SDFG+ +++ D+ S
Sbjct: 106 MCLDVCEGMAYLEEACVIHRDLA---ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 162
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT-GRRAVDSRRQSLVIWAKPLL 361
FP++ + SPE F K+DV++FGVL+ E+ + G+ ++R S V+
Sbjct: 163 KFPVK----WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV-----E 213
Query: 362 QTSNFKELVDPRLADAYDLAEMKRAMLTASVCIHHLSTMRPQMTRVLQLL 411
S L PRLA + M C RP +R+L+ L
Sbjct: 214 DISTGFRLYKPRLASTHVYQIMNH-------CWKERPEDRPAFSRLLRQL 256
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 24/230 (10%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYK 245
DF+ E ++ ++HP +L G E LV +F+ HG LS L
Sbjct: 68 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG 127
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNW---SHHI 302
+ L + EG+ YL A N L+ E+ ++SDFG+ +++ D+ S
Sbjct: 128 MCLDVCEGMAYLEEACVIHRDLA---ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 184
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT-GRRAVDSRRQSLVIWAKPLL 361
FP++ + SPE F K+DV++FGVL+ E+ + G+ ++R S V+
Sbjct: 185 KFPVK----WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV-----E 235
Query: 362 QTSNFKELVDPRLADAYDLAEMKRAMLTASVCIHHLSTMRPQMTRVLQLL 411
S L PRLA + M C RP +R+L+ L
Sbjct: 236 DISTGFRLYKPRLASTHVYQIMNH-------CWKERPEDRPAFSRLLRQL 278
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 99/230 (43%), Gaps = 24/230 (10%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYK 245
DF+ E ++ ++HP +L G E LV +F+ HG LS L
Sbjct: 49 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLG 108
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNW---SHHI 302
+ L + EG+ YL A N L+ E+ ++SDFG+ +++ D+ S
Sbjct: 109 MCLDVCEGMAYLEEACVIHRDLA---ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 165
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT-GRRAVDSRRQSLVIWAKPLL 361
FP++ + SPE F K+DV++FGVL+ E+ + G+ ++R S V+
Sbjct: 166 KFPVK----WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV-----E 216
Query: 362 QTSNFKELVDPRLADAYDLAEMKRAMLTASVCIHHLSTMRPQMTRVLQLL 411
S L PRLA + M C RP +R+L+ L
Sbjct: 217 DISTGFRLYKPRLASTHVYQIMNH-------CWRERPEDRPAFSRLLRQL 259
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L++Q +P G L + GS L W ++ IA+G+
Sbjct: 78 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 131
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFGLAK L + + +++
Sbjct: 132 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 189 LESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L++Q +P G L + GS L W ++ IA+G+
Sbjct: 79 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 132
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFGLAK L + + +++
Sbjct: 133 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L++Q +P G L + GS L W ++ IA+G+
Sbjct: 80 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 133
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFGLAK L + + +++
Sbjct: 134 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L+ Q +P G L + GS L W ++ IAEG+
Sbjct: 74 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAEGM 127
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFGLAK L + + +++
Sbjct: 128 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 184
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 185 LESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L++Q +P G L + GS L W ++ IA+G+
Sbjct: 77 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 130
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFGLAK L + + +++
Sbjct: 131 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L++Q +P G L + GS L W ++ IA+G+
Sbjct: 81 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 134
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFGLAK L + + +++
Sbjct: 135 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 192 LESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L++Q +P G L + GS L W ++ IA+G+
Sbjct: 78 PHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 131
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFGLAK L + + +++
Sbjct: 132 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 189 LESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L+ Q +P G L + GS L W ++ IA+G+
Sbjct: 111 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 164
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFGLAK L + + +++
Sbjct: 165 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 221
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 222 LESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 9/171 (5%)
Query: 180 EDEERISDFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLE 239
E E F+ EL ++ +NHPN KL G + N LV+++ GSL ++L G+
Sbjct: 41 ESESERKAFIVELRQLSRVNHPNIVKLYG-ACLNPVCLVMEYAEGGSLYNVLHGAEPLPY 99
Query: 240 WTIRYKIA--LGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEA-QISDFGLAKWLPD 296
+T + ++ L ++G+ YL K N+LL +I DFG A +
Sbjct: 100 YTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 159
Query: 297 NWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVD 347
+ +++ +G+ +++PE F EK DVF++G++L E+IT R+ D
Sbjct: 160 HMTNN-----KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 205
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 9/171 (5%)
Query: 180 EDEERISDFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLE 239
E E F+ EL ++ +NHPN KL G + N LV+++ GSL ++L G+
Sbjct: 40 ESESERKAFIVELRQLSRVNHPNIVKLYG-ACLNPVCLVMEYAEGGSLYNVLHGAEPLPY 98
Query: 240 WTIRYKIA--LGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEA-QISDFGLAKWLPD 296
+T + ++ L ++G+ YL K N+LL +I DFG A +
Sbjct: 99 YTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158
Query: 297 NWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVD 347
+ +++ +G+ +++PE F EK DVF++G++L E+IT R+ D
Sbjct: 159 HMTNN-----KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 204
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L+ Q +P G L + GS L W ++ IA+G+
Sbjct: 87 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 140
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFGLAK L + + +++
Sbjct: 141 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 197
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 198 LESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 7/164 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKLIGFSTENG---FHLVLQFLPHGSLSSLLFGSTECL 238
EE + DF E+ I+ + H N K G G L+++FLP+GSL L E +
Sbjct: 55 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERI 114
Query: 239 EWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-DN 297
+ + I +G++YL NIL+ + +I DFGL K LP D
Sbjct: 115 DHIKLLQYTSQICKGMEYLGTKRYIHRDLA---TRNILVENENRVKIGDFGLTKVLPQDK 171
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P E + +PE +DV++FGV+L EL T
Sbjct: 172 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 10/178 (5%)
Query: 185 ISDFLSELGIVAHINHPNAAKLIGFSTE---NGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
I+D E+ I+ ++ H N K G TE NG L+++FLP GSL L + +
Sbjct: 67 IADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLK 126
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL-PDNWSH 300
+ K A+ I +G+ YL A N+L+ +++ +I DFGL K + D
Sbjct: 127 QQLKYAVQICKGMDYLGSRQYVHRDLA---ARNVLVESEHQVKIGDFGLTKAIETDKEXX 183
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAK 358
+ + + +PE M +DV++FGV L EL+T DS + ++ K
Sbjct: 184 TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT---YCDSDSSPMALFLK 238
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L+ Q +P G L + GS L W ++ IA+G+
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 137
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFGLAK L + + +++
Sbjct: 138 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L+ Q +P G L + GS L W ++ IA+G+
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 133
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFGLAK L + + +++
Sbjct: 134 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 11/162 (6%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGST-ECLEWTIRYKI 246
FL E ++ + H +L +E ++V +++ GSL L G T + L +
Sbjct: 57 FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDM 116
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN-WS--HHIV 303
+ IA G+ Y+ +A+NIL+ E+ +++DFGLA+ + DN W+
Sbjct: 117 SAQIASGMAYVERMNYVHRDL---RAANILVGENLVCKVADFGLARLIEDNEWTARQGAK 173
Query: 304 FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRA 345
FPI+ T +PE ++G K+DV++FG+LL EL T R
Sbjct: 174 FPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRV 211
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L+ Q +P G L + GS L W ++ IA+G+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 130
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFGLAK L + + +++
Sbjct: 131 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L+ Q +P G L + GS L W ++ IA+G+
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 133
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFGLAK L + + +++
Sbjct: 134 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 11/198 (5%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
IG G VYKG +++ F +E+G++ H N +G+
Sbjct: 20 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 210 STENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXX 269
ST+ +V Q+ SL L S E IA A G+ YL
Sbjct: 77 STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL---HAKSIIHRD 133
Query: 270 XKASNILLSEDYEAQISDFGLAKWLPDNWS-HHIVFPIEGTFGYLSPEYFMHGIVDE--- 325
K++NI L ED +I DFGLA + WS H + G+ +++PE +
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 192
Query: 326 KTDVFAFGVLLLELITGR 343
++DV+AFG++L EL+TG+
Sbjct: 193 QSDVYAFGIVLYELMTGQ 210
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L+ Q +P G L + GS L W ++ IA+G+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 130
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFGLAK L + + +++
Sbjct: 131 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L+ Q +P G L + GS L W ++ IA+G+
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 133
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFGLAK L + + +++
Sbjct: 134 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L+ Q +P G L + GS L W ++ IA+G+
Sbjct: 79 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 132
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFGLAK L + + +++
Sbjct: 133 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L+ Q +P G L + GS L W ++ IA+G+
Sbjct: 71 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 124
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFGLAK L + + +++
Sbjct: 125 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 181
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 182 LESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 7/164 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKLIGFSTENG---FHLVLQFLPHGSLSSLLFGSTECL 238
EE + DF E+ I+ + H N K G G L++++LP+GSL L E +
Sbjct: 53 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 112
Query: 239 EWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNW 298
+ + I +G++YL NIL+ + +I DFGL K LP +
Sbjct: 113 DHIKLLQYTSQICKGMEYLGTKRYIHRNLA---TRNILVENENRVKIGDFGLTKVLPQDK 169
Query: 299 SHHIVF-PIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
++ V P E + +PE +DV++FGV+L EL T
Sbjct: 170 EYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 17/180 (9%)
Query: 181 DEERISDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLE 239
DEE FL E+ ++ + HPN K IG + + + +++ G+L ++
Sbjct: 47 DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYP 106
Query: 240 WTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWS 299
W+ R A IA G+ YL + N L+ E+ ++DFGLA+ + D +
Sbjct: 107 WSQRVSFAKDIASGMAYLHSMNIIHRDL---NSHNCLVRENKNVVVADFGLARLMVDEKT 163
Query: 300 H------------HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVD 347
+ + G +++PE DEK DVF+FG++L E+I GR D
Sbjct: 164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 83/178 (46%), Gaps = 10/178 (5%)
Query: 185 ISDFLSELGIVAHINHPNAAKLIGFSTE---NGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
I+D E+ I+ ++ H N K G TE NG L+++FLP GSL L + +
Sbjct: 55 IADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLK 114
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL-PDNWSH 300
+ K A+ I +G+ YL A N+L+ +++ +I DFGL K + D
Sbjct: 115 QQLKYAVQICKGMDYLGSRQYVHRDLA---ARNVLVESEHQVKIGDFGLTKAIETDKEXX 171
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAK 358
+ + + +PE M +DV++FGV L EL+T DS + ++ K
Sbjct: 172 TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT---YCDSDSSPMALFLK 226
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 7/164 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKLIGFSTENG---FHLVLQFLPHGSLSSLLFGSTECL 238
EE + DF E+ I+ + H N K G G L++++LP+GSL L E +
Sbjct: 55 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERI 114
Query: 239 EWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-DN 297
+ + I +G++YL NIL+ + +I DFGL K LP D
Sbjct: 115 DHIKLLQYTSQICKGMEYLGTKRYIHRDLA---TRNILVENENRVKIGDFGLTKVLPQDK 171
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P E + +PE +DV++FGV+L EL T
Sbjct: 172 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L+ Q +P G L + GS L W ++ IA+G+
Sbjct: 102 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 155
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFGLAK L + + +++
Sbjct: 156 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 212
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 213 LESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L+ Q +P G L + GS L W ++ IA+G+
Sbjct: 83 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 136
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFGLAK L + + +++
Sbjct: 137 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 193
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 194 LESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGST-ECLEWTIRYKI 246
FL E ++ + H +L +E ++V +++ GSL L G T + L +
Sbjct: 53 FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 112
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHIV 303
A IA G+ Y+ +A+NIL+ E+ +++DFGLA+ + DN
Sbjct: 113 AAQIASGMAYVERMNYVHRDL---RAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 169
Query: 304 FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE ++G K+DV++FG+LL EL T R
Sbjct: 170 FPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGR 206
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L+ Q +P G L + GS L W ++ IA+G+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 130
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFGLAK L + + +++
Sbjct: 131 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGST-ECLEWTIRYKI 246
FL E ++ + H +L +E ++V +++ GSL L G T + L +
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 285
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHIV 303
A IA G+ Y+ +A+NIL+ E+ +++DFGLA+ + DN
Sbjct: 286 AAQIASGMAYVERMNYVHRDL---RAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 342
Query: 304 FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE ++G K+DV++FG+LL EL T R
Sbjct: 343 FPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGST-ECLEWTIRYKI 246
FL E ++ + H +L +E ++V +++ GSL L G T + L +
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 285
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHIV 303
A IA G+ Y+ +A+NIL+ E+ +++DFGLA+ + DN
Sbjct: 286 AAQIASGMAYVERMNYVHRDL---RAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 342
Query: 304 FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE ++G K+DV++FG+LL EL T R
Sbjct: 343 FPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR--YK 245
FL+E ++ + H +L T+ +++ +++ +GSL L + ++ TI
Sbjct: 61 FLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLD 119
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHI 302
+A IAEG+ ++ +A+NIL+S+ +I+DFGLA+ + DN
Sbjct: 120 MAAQIAEGMAFIEERNYIHRDL---RAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 176
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE +G K+DV++FG+LL E++T R
Sbjct: 177 KFPIKWT----APEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGST-ECLEWTIRYKI 246
FL E ++ + H +L +E ++V +++ GSL L G T + L +
Sbjct: 309 FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 368
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHIV 303
A IA G+ Y+ +A+NIL+ E+ +++DFGLA+ + DN
Sbjct: 369 AAQIASGMAYVERMNYVHRDL---RAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 425
Query: 304 FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE ++G K+DV++FG+LL EL T R
Sbjct: 426 FPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGR 462
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 7/164 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKLIGFSTENG---FHLVLQFLPHGSLSSLLFGSTECL 238
EE + DF E+ I+ + H N K G G L++++LP+GSL L E +
Sbjct: 51 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 110
Query: 239 EWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-DN 297
+ + I +G++YL NIL+ + +I DFGL K LP D
Sbjct: 111 DHIKLLQYTSQICKGMEYLGTKRYIHRDLA---TRNILVENENRVKIGDFGLTKVLPQDK 167
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P E + +PE +DV++FGV+L EL T
Sbjct: 168 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR--YK 245
FL+E ++ + H +L T+ +++ +++ +GSL L + ++ TI
Sbjct: 63 FLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLD 121
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHI 302
+A IAEG+ ++ +A+NIL+S+ +I+DFGLA+ + DN
Sbjct: 122 MAAQIAEGMAFIEERNYIHRDL---RAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 178
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE +G K+DV++FG+LL E++T R
Sbjct: 179 KFPIKWT----APEAINYGTFTIKSDVWSFGILLTEIVTHGR 216
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR--YK 245
FL+E ++ + H +L T+ +++ +++ +GSL L + ++ TI
Sbjct: 51 FLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLD 109
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHI 302
+A IAEG+ ++ +A+NIL+S+ +I+DFGLA+ + DN
Sbjct: 110 MAAQIAEGMAFIEERNYIHRNL---RAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 166
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE +G K+DV++FG+LL E++T R
Sbjct: 167 KFPIKWT----APEAINYGTFTIKSDVWSFGILLTEIVTHGR 204
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR--YK 245
FL+E ++ + H +L T+ +++ +++ +GSL L + ++ TI
Sbjct: 61 FLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLD 119
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHI 302
+A IAEG+ ++ +A+NIL+S+ +I+DFGLA+ + DN
Sbjct: 120 MAAQIAEGMAFIEERNYIHRDL---RAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 176
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE +G K+DV++FG+LL E++T R
Sbjct: 177 KFPIKWT----APEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 7/164 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKLIGFSTENG---FHLVLQFLPHGSLSSLLFGSTECL 238
EE + DF E+ I+ + H N K G G L++++LP+GSL L E +
Sbjct: 55 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 114
Query: 239 EWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-DN 297
+ + I +G++YL NIL+ + +I DFGL K LP D
Sbjct: 115 DHIKLLQYTSQICKGMEYLGTKRYIHRDLA---TRNILVENENRVKIGDFGLTKVLPQDK 171
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P E + +PE +DV++FGV+L EL T
Sbjct: 172 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR--YK 245
FL+E ++ + H +L T+ +++ +++ +GSL L + ++ TI
Sbjct: 50 FLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLD 108
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHI 302
+A IAEG+ ++ +A+NIL+S+ +I+DFGLA+ + DN
Sbjct: 109 MAAQIAEGMAFIEERNYIHRDL---RAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 165
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE +G K+DV++FG+LL E++T R
Sbjct: 166 KFPIKWT----APEAINYGTFTIKSDVWSFGILLTEIVTHGR 203
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR--YK 245
FL+E ++ + H +L T+ +++ +++ +GSL L + ++ TI
Sbjct: 60 FLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLD 118
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHI 302
+A IAEG+ ++ +A+NIL+S+ +I+DFGLA+ + DN
Sbjct: 119 MAAQIAEGMAFIEERNYIHRDL---RAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 175
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE +G K+DV++FG+LL E++T R
Sbjct: 176 KFPIKWT----APEAINYGTFTIKSDVWSFGILLTEIVTHGR 213
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 7/164 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKLIGFSTENG---FHLVLQFLPHGSLSSLLFGSTECL 238
EE + DF E+ I+ + H N K G G L++++LP+GSL L E +
Sbjct: 52 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 111
Query: 239 EWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-DN 297
+ + I +G++YL NIL+ + +I DFGL K LP D
Sbjct: 112 DHIKLLQYTSQICKGMEYLGTKRYIHRDLA---TRNILVENENRVKIGDFGLTKVLPQDK 168
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P E + +PE +DV++FGV+L EL T
Sbjct: 169 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR--YK 245
FL+E ++ + H +L T+ +++ +++ +GSL L + ++ TI
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLD 113
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHI 302
+A IAEG+ ++ +A+NIL+S+ +I+DFGLA+ + DN
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDL---RAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 170
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE +G K+DV++FG+LL E++T R
Sbjct: 171 KFPIKWT----APEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR--YK 245
FL+E ++ + H +L T+ +++ +++ +GSL L + ++ TI
Sbjct: 56 FLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLD 114
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHI 302
+A IAEG+ ++ +A+NIL+S+ +I+DFGLA+ + DN
Sbjct: 115 MAAQIAEGMAFIEERNYIHRDL---RAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 171
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE +G K+DV++FG+LL E++T R
Sbjct: 172 KFPIKWT----APEAINYGTFTIKSDVWSFGILLTEIVTHGR 209
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L++Q +P G L + GS L W ++ IA+G+
Sbjct: 79 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 132
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFG AK L + + +++
Sbjct: 133 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR--YK 245
FL+E ++ + H +L T+ +++ +++ +GSL L + ++ TI
Sbjct: 64 FLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLD 122
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHI 302
+A IAEG+ ++ +A+NIL+S+ +I+DFGLA+ + DN
Sbjct: 123 MAAQIAEGMAFIEERNYIHRDL---RAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 179
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE +G K+DV++FG+LL E++T R
Sbjct: 180 KFPIKWT----APEAINYGTFTIKSDVWSFGILLTEIVTHGR 217
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR--YK 245
FL+E ++ + H +L T+ +++ +++ +GSL L + ++ TI
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLD 113
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHI 302
+A IAEG+ ++ +A+NIL+S+ +I+DFGLA+ + DN
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDL---RAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 170
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE +G K+DV++FG+LL E++T R
Sbjct: 171 KFPIKWT----APEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR--YK 245
FL+E ++ + H +L T+ +++ +++ +GSL L + ++ TI
Sbjct: 57 FLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLD 115
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHI 302
+A IAEG+ ++ +A+NIL+S+ +I+DFGLA+ + DN
Sbjct: 116 MAAQIAEGMAFIEERNYIHRDL---RAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 172
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE +G K+DV++FG+LL E++T R
Sbjct: 173 KFPIKWT----APEAINYGTFTIKSDVWSFGILLTEIVTHGR 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 7/164 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKLIGFSTENG---FHLVLQFLPHGSLSSLLFGSTECL 238
EE + DF E+ I+ + H N K G G L++++LP+GSL L E +
Sbjct: 52 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 111
Query: 239 EWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-DN 297
+ + I +G++YL NIL+ + +I DFGL K LP D
Sbjct: 112 DHIKLLQYTSQICKGMEYLGTKRYIHRDLA---TRNILVENENRVKIGDFGLTKVLPQDK 168
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P E + +PE +DV++FGV+L EL T
Sbjct: 169 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 7/164 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKLIGFSTENG---FHLVLQFLPHGSLSSLLFGSTECL 238
EE + DF E+ I+ + H N K G G L++++LP+GSL L E +
Sbjct: 56 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 115
Query: 239 EWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-DN 297
+ + I +G++YL NIL+ + +I DFGL K LP D
Sbjct: 116 DHIKLLQYTSQICKGMEYLGTKRYIHRDLA---TRNILVENENRVKIGDFGLTKVLPQDK 172
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P E + +PE +DV++FGV+L EL T
Sbjct: 173 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 7/164 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKLIGFSTENG---FHLVLQFLPHGSLSSLLFGSTECL 238
EE + DF E+ I+ + H N K G G L++++LP+GSL L E +
Sbjct: 57 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 116
Query: 239 EWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-DN 297
+ + I +G++YL NIL+ + +I DFGL K LP D
Sbjct: 117 DHIKLLQYTSQICKGMEYLGTKRYIHRDLA---TRNILVENENRVKIGDFGLTKVLPQDK 173
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P E + +PE +DV++FGV+L EL T
Sbjct: 174 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 7/164 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKLIGFSTENG---FHLVLQFLPHGSLSSLLFGSTECL 238
EE + DF E+ I+ + H N K G G L++++LP+GSL L E +
Sbjct: 58 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 117
Query: 239 EWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-DN 297
+ + I +G++YL NIL+ + +I DFGL K LP D
Sbjct: 118 DHIKLLQYTSQICKGMEYLGTKRYIHRDLA---TRNILVENENRVKIGDFGLTKVLPQDK 174
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P E + +PE +DV++FGV+L EL T
Sbjct: 175 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR--YK 245
FL+E ++ + H +L T+ +++ +++ +GSL L + ++ TI
Sbjct: 65 FLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLD 123
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHI 302
+A IAEG+ ++ +A+NIL+S+ +I+DFGLA+ + DN
Sbjct: 124 MAAQIAEGMAFIEERNYIHRDL---RAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 180
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE +G K+DV++FG+LL E++T R
Sbjct: 181 KFPIKWT----APEAINYGTFTIKSDVWSFGILLTEIVTHGR 218
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L++Q +P G L + GS L W ++ IA+G+
Sbjct: 81 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 134
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFG AK L + + +++
Sbjct: 135 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 192 LESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 7/164 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKLIGFSTENG---FHLVLQFLPHGSLSSLLFGSTECL 238
EE + DF E+ I+ + H N K G G L++++LP+GSL L E +
Sbjct: 50 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 109
Query: 239 EWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-DN 297
+ + I +G++YL NIL+ + +I DFGL K LP D
Sbjct: 110 DHIKLLQYTSQICKGMEYLGTKRYIHRDLA---TRNILVENENRVKIGDFGLTKVLPQDK 166
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P E + +PE +DV++FGV+L EL T
Sbjct: 167 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 7/164 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKLIGFSTENG---FHLVLQFLPHGSLSSLLFGSTECL 238
EE + DF E+ I+ + H N K G G L++++LP+GSL L E +
Sbjct: 59 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 118
Query: 239 EWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-DN 297
+ + I +G++YL NIL+ + +I DFGL K LP D
Sbjct: 119 DHIKLLQYTSQICKGMEYLGTKRYIHRDLA---TRNILVENENRVKIGDFGLTKVLPQDK 175
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P E + +PE +DV++FGV+L EL T
Sbjct: 176 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR--YK 245
FL+E ++ + H +L T+ +++ +++ +GSL L + ++ TI
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLD 113
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHI 302
+A IAEG+ ++ +A+NIL+S+ +I+DFGLA+ + DN
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDL---RAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 170
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE +G K+DV++FG+LL E++T R
Sbjct: 171 KFPIKWT----APEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L++Q +P G L + GS L W ++ IA+G+
Sbjct: 79 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 132
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFG AK L + + +++
Sbjct: 133 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++ G VYKG +P+GE E + + L E ++A +++
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L++Q +P G L + GS L W ++ IA+G+
Sbjct: 84 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 137
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFGLAK L + + +++
Sbjct: 138 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 7/164 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKLIGFSTENG---FHLVLQFLPHGSLSSLLFGSTECL 238
EE + DF E+ I+ + H N K G G L++++LP+GSL L E +
Sbjct: 83 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 142
Query: 239 EWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-DN 297
+ + I +G++YL NIL+ + +I DFGL K LP D
Sbjct: 143 DHIKLLQYTSQICKGMEYLGTKRYIHRDLA---TRNILVENENRVKIGDFGLTKVLPQDK 199
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P E + +PE +DV++FGV+L EL T
Sbjct: 200 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 149 LIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKL 206
+IG+G VY G L DG+ D +S FL+E I+ +HPN L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 207 IGFS--TENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG--IAEGLQYLXXXXX 262
+G +E +VL ++ HG L + + T T++ I G +A+G++YL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKYLASKKF 154
Query: 263 XXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN--WSHHIVFPIEGTFGYLSPEYFMH 320
A N +L E + +++DFGLA+ + D +S H + +++ E
Sbjct: 155 VHRDLA---ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 321 GIVDEKTDVFAFGVLLLELIT 341
K+DV++FGVLL EL+T
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT 232
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGST-ECLEWTIRYKI 246
FL E ++ + H +L +E ++V++++ GSL L G + L +
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHIV 303
A IA G+ Y+ +A+NIL+ E+ +++DFGLA+ + DN
Sbjct: 120 AAQIASGMAYVERMNYVHRDL---RAANILVGENLVCKVADFGLARLIEDNEXTARQGAK 176
Query: 304 FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRA 345
FPI+ T +PE ++G K+DV++FG+LL EL T R
Sbjct: 177 FPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 149 LIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKL 206
+IG+G VY G L DG+ D +S FL+E I+ +HPN L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 207 IGFS--TENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG--IAEGLQYLXXXXX 262
+G +E +VL ++ HG L + + T T++ I G +A+G++YL
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKYLASKKF 172
Query: 263 XXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN--WSHHIVFPIEGTFGYLSPEYFMH 320
A N +L E + +++DFGLA+ + D +S H + +++ E
Sbjct: 173 VHRDLA---ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 229
Query: 321 GIVDEKTDVFAFGVLLLELIT 341
K+DV++FGVLL EL+T
Sbjct: 230 QKFTTKSDVWSFGVLLWELMT 250
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 7/164 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKLIGFSTENG---FHLVLQFLPHGSLSSLLFGSTECL 238
EE + DF E+ I+ + H N K G G L++++LP+GSL L E +
Sbjct: 70 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 129
Query: 239 EWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-DN 297
+ + I +G++YL NIL+ + +I DFGL K LP D
Sbjct: 130 DHIKLLQYTSQICKGMEYLGTKRYIHRDLA---TRNILVENENRVKIGDFGLTKVLPQDK 186
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P E + +PE +DV++FGV+L EL T
Sbjct: 187 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 7/164 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKLIGFSTENG---FHLVLQFLPHGSLSSLLFGSTECL 238
EE + DF E+ I+ + H N K G G L++++LP+GSL L E +
Sbjct: 70 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 129
Query: 239 EWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-DN 297
+ + I +G++YL NIL+ + +I DFGL K LP D
Sbjct: 130 DHIKLLQYTSQICKGMEYLGTKRYIHRDLA---TRNILVENENRVKIGDFGLTKVLPQDK 186
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P E + +PE +DV++FGV+L EL T
Sbjct: 187 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 15/207 (7%)
Query: 143 NFNSENLIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINH 200
+FN +IG+G VY G L DG+ D +S FL+E I+ +H
Sbjct: 30 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 87
Query: 201 PNAAKLIGFS--TENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG--IAEGLQY 256
PN L+G +E +VL ++ HG L + + T T++ I G +A+G++Y
Sbjct: 88 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKY 145
Query: 257 LXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN--WSHHIVFPIEGTFGYLS 314
L A N +L E + +++DFGLA+ + D +S H + +++
Sbjct: 146 LASKKFVHRDLA---ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E K+DV++FGVLL EL+T
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 149 LIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKL 206
+IG+G VY G L DG+ D +S FL+E I+ +HPN L
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 207 IGFS--TENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG--IAEGLQYLXXXXX 262
+G +E +VL ++ HG L + + T T++ I G +A+G++YL
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKYLASKKF 173
Query: 263 XXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN--WSHHIVFPIEGTFGYLSPEYFMH 320
A N +L E + +++DFGLA+ + D +S H + +++ E
Sbjct: 174 VHRDLA---ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 230
Query: 321 GIVDEKTDVFAFGVLLLELIT 341
K+DV++FGVLL EL+T
Sbjct: 231 QKFTTKSDVWSFGVLLWELMT 251
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 15/207 (7%)
Query: 143 NFNSENLIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINH 200
+FN +IG+G VY G L DG+ D +S FL+E I+ +H
Sbjct: 25 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 82
Query: 201 PNAAKLIGFS--TENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG--IAEGLQY 256
PN L+G +E +VL ++ HG L + + T T++ I G +A+G++Y
Sbjct: 83 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKY 140
Query: 257 LXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN--WSHHIVFPIEGTFGYLS 314
L A N +L E + +++DFGLA+ + D +S H + +++
Sbjct: 141 LASKKFVHRDLA---ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E K+DV++FGVLL EL+T
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 18/203 (8%)
Query: 148 NLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXEDE--ERISDFLSELGIVAHINHPNAA 204
++G G VYKG +P+GE E + +F+ E I+A ++HP+
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 205 KLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGLQYLX 258
+L+G LV Q +PHG L + GS L W ++ IA+G+ YL
Sbjct: 104 RLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLE 157
Query: 259 XXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYF 318
A N+L+ +I+DFGLA+ L + + + +++ E
Sbjct: 158 ERRLVHRDLA---ARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 214
Query: 319 MHGIVDEKTDVFAFGVLLLELIT 341
+ ++DV+++GV + EL+T
Sbjct: 215 HYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGST-ECLEWTIRYKI 246
FL E ++ I H +L +E ++V +++ GSL L G + L +
Sbjct: 60 FLQEAQVMKKIRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHIV 303
A IA G+ Y+ +A+NIL+ E+ +++DFGLA+ + DN
Sbjct: 120 AAQIASGMAYVERMNYVHRDL---RAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 304 FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE ++G K+DV++FG+LL EL T R
Sbjct: 177 FPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGST-ECLEWTIRYKI 246
FL E ++ + H +L +E ++V++++ GSL L G + L +
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHIV 303
A IA G+ Y+ +A+NIL+ E+ +++DFGLA+ + DN
Sbjct: 120 AAQIASGMAYVERMNYVHRDL---RAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 304 FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRA 345
FPI+ T +PE ++G K+DV++FG+LL EL T R
Sbjct: 177 FPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 16/217 (7%)
Query: 133 DFAELAAATDNFNSENLIGKGGHAEVYKG--CLPDGEXXXXXXXXXXXXEDEERISDFLS 190
+FA+ AT N + + ++G G EV G LP + E++ DFL
Sbjct: 37 EFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 191 ELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIAL- 248
E I+ +HPN +L G T++ +V +++ +GSL S L ++T+ + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGML 153
Query: 249 -GIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE 307
GIA G++YL A NIL++ + ++SDFGLA+ L D+ +
Sbjct: 154 RGIASGMKYLSDMGYVHRDLA---ARNILINSNLVCKVSDFGLARVLEDD--PEAAYTTR 208
Query: 308 G---TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
G + SPE + +DV+++G++L E+++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 15/207 (7%)
Query: 143 NFNSENLIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINH 200
+FN +IG+G VY G L DG+ D +S FL+E I+ +H
Sbjct: 28 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 85
Query: 201 PNAAKLIGFS--TENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG--IAEGLQY 256
PN L+G +E +VL ++ HG L + + T T++ I G +A+G++Y
Sbjct: 86 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKY 143
Query: 257 LXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN--WSHHIVFPIEGTFGYLS 314
L A N +L E + +++DFGLA+ + D +S H + +++
Sbjct: 144 LASKKFVHRDLA---ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E K+DV++FGVLL EL+T
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGST-ECLEWTIRYKI 246
FL E ++ + H +L +E ++V +++ GSL L G T + L +
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDM 285
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHIV 303
A IA G+ Y+ +A+NIL+ E+ +++DFGLA+ + DN
Sbjct: 286 AAQIASGMAYVERMNYVHRDL---RAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 342
Query: 304 FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE ++G K+DV++FG+LL EL T R
Sbjct: 343 FPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 15/207 (7%)
Query: 143 NFNSENLIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINH 200
+FN +IG+G VY G L DG+ D +S FL+E I+ +H
Sbjct: 33 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 201 PNAAKLIGFS--TENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG--IAEGLQY 256
PN L+G +E +VL ++ HG L + + T T++ I G +A+G++Y
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKY 148
Query: 257 LXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN--WSHHIVFPIEGTFGYLS 314
L A N +L E + +++DFGLA+ + D +S H + +++
Sbjct: 149 LASKKFVHRDLA---ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E K+DV++FGVLL EL+T
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGST-ECLEWTIRYKI 246
FL E ++ + H +L +E +V +++ GSL L G T + L +
Sbjct: 50 FLQEAQVMKKLRHEKLVQLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 109
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHIV 303
A IA G+ Y+ +A+NIL+ E+ +++DFGLA+ + DN
Sbjct: 110 AAQIASGMAYVERMNYVHRDL---RAANILVGENLVCKVADFGLARLIEDNEXTARQGAK 166
Query: 304 FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRA 345
FPI+ T +PE ++G K+DV++FG+LL EL T R
Sbjct: 167 FPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRV 204
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 15/207 (7%)
Query: 143 NFNSENLIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINH 200
+FN +IG+G VY G L DG+ D +S FL+E I+ +H
Sbjct: 32 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 201 PNAAKLIGFS--TENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG--IAEGLQY 256
PN L+G +E +VL ++ HG L + + T T++ I G +A+G++Y
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKY 147
Query: 257 LXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN--WSHHIVFPIEGTFGYLS 314
L A N +L E + +++DFGLA+ + D +S H + +++
Sbjct: 148 LASKKFVHRDLA---ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E K+DV++FGVLL EL+T
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 15/207 (7%)
Query: 143 NFNSENLIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINH 200
+FN +IG+G VY G L DG+ D +S FL+E I+ +H
Sbjct: 31 HFNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 201 PNAAKLIGFS--TENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG--IAEGLQY 256
PN L+G +E +VL ++ HG L + + T T++ I G +A+G++Y
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKY 146
Query: 257 LXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN--WSHHIVFPIEGTFGYLS 314
L A N +L E + +++DFGLA+ + D +S H + +++
Sbjct: 147 LASKKFVHRDLA---ARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E K+DV++FGVLL EL+T
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 13/203 (6%)
Query: 147 ENLIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAA 204
E +IG G EV G L P E++ DFLSE I+ +HPN
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 205 KLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIAL--GIAEGLQYLXXXX 261
L G T++ ++ +F+ +GSL S L + ++T+ + + GIA G++YL
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLADMN 129
Query: 262 XXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEG---TFGYLSPEYF 318
A NIL++ + ++SDFGL+++L D+ S G + +PE
Sbjct: 130 YVHRALA---ARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 319 MHGIVDEKTDVFAFGVLLLELIT 341
+ +DV+++G+++ E+++
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMS 209
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 149 LIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXEDE--ERISDFLSELGIVAHINHPNAAK 205
++G G VYKG +P+GE E + +F+ E I+A ++HP+ +
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 206 LIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGLQYLXX 259
L+G LV Q +PHG L + GS L W ++ IA+G+ YL
Sbjct: 82 LLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLEE 135
Query: 260 XXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFM 319
A N+L+ +I+DFGLA+ L + + + +++ E
Sbjct: 136 RRLVHRDLA---ARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 192
Query: 320 HGIVDEKTDVFAFGVLLLELIT 341
+ ++DV+++GV + EL+T
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMT 214
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 7/164 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKLIGFSTENG---FHLVLQFLPHGSLSSLLFGSTECL 238
EE + DF E+ I+ + H N K G G L++++LP+GSL L E +
Sbjct: 52 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI 111
Query: 239 EWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP-DN 297
+ + I +G++YL NIL+ + +I DFGL K LP D
Sbjct: 112 DHIKLLQYTSQICKGMEYLGTKRYIHRDLA---TRNILVENENRVKIGDFGLTKVLPQDK 168
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P E + +PE +DV++FGV+L EL T
Sbjct: 169 EFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 85/198 (42%), Gaps = 11/198 (5%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
IG G VYKG +++ F +E+G++ H N +G+
Sbjct: 32 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 210 STENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXX 269
ST+ +V Q+ SL L S E IA A G+ YL
Sbjct: 89 STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL---HAKSIIHRD 145
Query: 270 XKASNILLSEDYEAQISDFGLAKWLPDNWS-HHIVFPIEGTFGYLSPEYFMHGIVDE--- 325
K++NI L ED +I DFGLA WS H + G+ +++PE +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLAT-EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 326 KTDVFAFGVLLLELITGR 343
++DV+AFG++L EL+TG+
Sbjct: 205 QSDVYAFGIVLYELMTGQ 222
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGST-ECLEWTIRYKI 246
FL E ++ + H +L +E ++V +++ GSL L G T + L +
Sbjct: 57 FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDM 116
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHIV 303
+ IA G+ Y+ +A+NIL+ E+ +++DFGLA+ + DN
Sbjct: 117 SAQIASGMAYVERMNYVHRDL---RAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 173
Query: 304 FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRA 345
FPI+ T +PE ++G K+DV++FG+LL EL T R
Sbjct: 174 FPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRV 211
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 16/217 (7%)
Query: 133 DFAELAAATDNFNSENLIGKGGHAEVYKG--CLPDGEXXXXXXXXXXXXEDEERISDFLS 190
+FA+ AT N + + ++G G EV G LP + E++ DFL
Sbjct: 25 EFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 83
Query: 191 ELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIAL- 248
E I+ +HPN +L G T++ +V +++ +GSL S L ++T+ + +
Sbjct: 84 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGML 141
Query: 249 -GIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE 307
GIA G++YL A NIL++ + ++SDFGL++ L D+ +
Sbjct: 142 RGIASGMKYLSDMGYVHRDLA---ARNILINSNLVCKVSDFGLSRVLEDD--PEAAYTTR 196
Query: 308 G---TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
G + SPE + +DV+++G++L E+++
Sbjct: 197 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L+ Q +P G L + GS L W ++ IA+G+
Sbjct: 79 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 132
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFG AK L + + +++
Sbjct: 133 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L+ Q +P G L + GS L W ++ IA+G+
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 137
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFG AK L + + +++
Sbjct: 138 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGST-ECLEWTIRYKI 246
FL E ++ + H +L +E ++V +++ GSL L G + L +
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHIV 303
A IA G+ Y+ +A+NIL+ E+ +++DFGLA+ + DN
Sbjct: 120 AAQIASGMAYVERMNYVHRDL---RAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 304 FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE ++G K+DV++FG+LL EL T R
Sbjct: 177 FPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 16/217 (7%)
Query: 133 DFAELAAATDNFNSENLIGKGGHAEVYKG--CLPDGEXXXXXXXXXXXXEDEERISDFLS 190
+FA+ AT N + + ++G G EV G LP + E++ DFL
Sbjct: 8 EFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 66
Query: 191 ELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIAL- 248
E I+ +HPN +L G T++ +V +++ +GSL S L ++T+ + +
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGML 124
Query: 249 -GIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE 307
GIA G++YL A NIL++ + ++SDFGL++ L D+ +
Sbjct: 125 RGIASGMKYLSDMGYVHRDLA---ARNILINSNLVCKVSDFGLSRVLEDD--PEAAYTTR 179
Query: 308 G---TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
G + SPE + +DV+++G++L E+++
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++ G VYKG +P+GE E + + L E ++A +++
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L+ Q +P G L + GS L W ++ IA+G+
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 137
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFGLAK L + + +++
Sbjct: 138 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++ G VYKG +P+GE E + + L E ++A +++
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L+ Q +P G L + GS L W ++ IA+G+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 130
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFGLAK L + + +++
Sbjct: 131 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 18/207 (8%)
Query: 144 FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXE--DEERISDFLSELGIVAHINH 200
F ++G G VYKG +P+GE E + + L E ++A +++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGL 254
P+ +L+G + L+ Q +P G L + GS L W ++ IA+G+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGM 130
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
YL A N+L+ +I+DFG AK L + + +++
Sbjct: 131 NYLEDRRLVHRDLA---ARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E +H I ++DV+++GV + EL+T
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 9/201 (4%)
Query: 147 ENLIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAA 204
E +IG G EV G L P E++ DFLSE I+ +HPN
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 205 KLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXX 263
L G T++ ++ +F+ +GSL S L + + GIA G++YL
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYV 157
Query: 264 XXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEG---TFGYLSPEYFMH 320
A NIL++ + ++SDFGL+++L D+ S G + +PE +
Sbjct: 158 HRDLA---ARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 214
Query: 321 GIVDEKTDVFAFGVLLLELIT 341
+DV+++G+++ E+++
Sbjct: 215 RKFTSASDVWSYGIVMWEVMS 235
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGST-ECLEWTIRYKI 246
FL E ++ + H +L +E ++V +++ GSL L G + L +
Sbjct: 51 FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 110
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHIV 303
A IA G+ Y+ +A+NIL+ E+ +++DFGLA+ + DN
Sbjct: 111 AAQIASGMAYVERMNYVHRDL---RAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 167
Query: 304 FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRA 345
FPI+ T +PE ++G K+DV++FG+LL EL T R
Sbjct: 168 FPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRV 205
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 84/198 (42%), Gaps = 11/198 (5%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
IG G VYKG +++ F +E+G++ H N +G+
Sbjct: 32 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 210 STENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXX 269
ST +V Q+ SL L S E IA A G+ YL
Sbjct: 89 STAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL---HAKSIIHRD 145
Query: 270 XKASNILLSEDYEAQISDFGLAKWLPDNWS-HHIVFPIEGTFGYLSPEYFMHGIVDE--- 325
K++NI L ED +I DFGLA WS H + G+ +++PE +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLAT-EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 326 KTDVFAFGVLLLELITGR 343
++DV+AFG++L EL+TG+
Sbjct: 205 QSDVYAFGIVLYELMTGQ 222
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 16/217 (7%)
Query: 133 DFAELAAATDNFNSENLIGKGGHAEVYKG--CLPDGEXXXXXXXXXXXXEDEERISDFLS 190
+FA+ AT N + + ++G G EV G LP + E++ DFL
Sbjct: 35 EFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 93
Query: 191 ELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIAL- 248
E I+ +HPN +L G T++ +V +++ +GSL S L ++T+ + +
Sbjct: 94 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGML 151
Query: 249 -GIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE 307
GIA G++YL A NIL++ + ++SDFGL++ L D+ +
Sbjct: 152 RGIASGMKYLSDMGYVHRDLA---ARNILINSNLVCKVSDFGLSRVLEDD--PEAAYTTR 206
Query: 308 G---TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
G + SPE + +DV+++G++L E+++
Sbjct: 207 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 16/217 (7%)
Query: 133 DFAELAAATDNFNSENLIGKGGHAEVYKG--CLPDGEXXXXXXXXXXXXEDEERISDFLS 190
+FA+ AT N + + ++G G EV G LP + E++ DFL
Sbjct: 37 EFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 191 ELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIAL- 248
E I+ +HPN +L G T++ +V +++ +GSL S L ++T+ + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGML 153
Query: 249 -GIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE 307
GIA G++YL A NIL++ + ++SDFGL++ L D+ +
Sbjct: 154 RGIASGMKYLSDMGYVHRDLA---ARNILINSNLVCKVSDFGLSRVLEDD--PEAAYTTR 208
Query: 308 G---TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
G + SPE + +DV+++G++L E+++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGST-ECLEWTIRYKI 246
FL E ++ + H +L +E ++V++++ G L L G + L +
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDM 119
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHIV 303
A IA G+ Y+ +A+NIL+ E+ +++DFGLA+ + DN
Sbjct: 120 AAQIASGMAYVERMNYVHRDL---RAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 304 FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRA 345
FPI+ T +PE ++G K+DV++FG+LL EL T R
Sbjct: 177 FPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRV 214
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGST-ECLEWTIRYKI 246
FL E ++ + H +L +E ++V +++ GSL L G + L +
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHIV 303
A IA G+ Y+ +A+NIL+ E+ +++DFGLA+ + DN
Sbjct: 120 AAQIASGMAYVERMNYVHRDL---RAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 304 FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE ++G K+DV++FG+LL EL T R
Sbjct: 177 FPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGST-ECLEWTIRYKI 246
FL E ++ + H +L +E ++V +++ GSL L G + L +
Sbjct: 49 FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 108
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHIV 303
A IA G+ Y+ +A+NIL+ E+ +++DFGLA+ + DN
Sbjct: 109 AAQIASGMAYVERMNYVHRDL---RAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 165
Query: 304 FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRA 345
FPI+ T +PE ++G K+DV++FG+LL EL T R
Sbjct: 166 FPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGRV 203
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 16/217 (7%)
Query: 133 DFAELAAATDNFNSENLIGKGGHAEVYKG--CLPDGEXXXXXXXXXXXXEDEERISDFLS 190
+FA+ AT N + + ++G G EV G LP + E++ DFL
Sbjct: 37 EFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 191 ELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIAL- 248
E I+ +HPN +L G T++ +V +++ +GSL S L ++T+ + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGML 153
Query: 249 -GIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE 307
GIA G++YL A NIL++ + ++SDFGL++ L D+ +
Sbjct: 154 RGIASGMKYLSDMGYVHRDLA---ARNILINSNLVCKVSDFGLSRVLEDD--PEAAYTTR 208
Query: 308 G---TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
G + SPE + +DV+++G++L E+++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 16/217 (7%)
Query: 133 DFAELAAATDNFNSENLIGKGGHAEVYKG--CLPDGEXXXXXXXXXXXXEDEERISDFLS 190
+FA+ AT N + + ++G G EV G LP + E++ DFL
Sbjct: 37 EFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 191 ELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIAL- 248
E I+ +HPN +L G T++ +V +++ +GSL S L ++T+ + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGML 153
Query: 249 -GIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE 307
GIA G++YL A NIL++ + ++SDFGL++ L D+ +
Sbjct: 154 RGIASGMKYLSDMGYVHRDLA---ARNILINSNLVCKVSDFGLSRVLEDD--PEAAYTTR 208
Query: 308 G---TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
G + SPE + +DV+++G++L E+++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 16/217 (7%)
Query: 133 DFAELAAATDNFNSENLIGKGGHAEVYKG--CLPDGEXXXXXXXXXXXXEDEERISDFLS 190
+FA+ AT N + + ++G G EV G LP + E++ DFL
Sbjct: 37 EFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 191 ELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIAL- 248
E I+ +HPN +L G T++ +V +++ +GSL S L ++T+ + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGML 153
Query: 249 -GIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE 307
GIA G++YL A NIL++ + ++SDFGL++ L D+ +
Sbjct: 154 RGIASGMKYLSDMGYVHRDLA---ARNILINSNLVCKVSDFGLSRVLEDD--PEAAYTTR 208
Query: 308 G---TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
G + SPE + +DV+++G++L E+++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 149 LIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKL 206
+IG+G VY G L DG+ D +S FL+E I+ +HPN L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 207 IGFS--TENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG--IAEGLQYLXXXXX 262
+G +E +VL ++ HG L + + T T++ I G +A+G++YL
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKYLASKKF 153
Query: 263 XXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN--WSHHIVFPIEGTFGYLSPEYFMH 320
A N +L E + +++DFGLA+ + D S H + +++ E
Sbjct: 154 VHRDLA---ARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQT 210
Query: 321 GIVDEKTDVFAFGVLLLELIT 341
K+DV++FGVLL EL+T
Sbjct: 211 QKFTTKSDVWSFGVLLWELMT 231
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 11/198 (5%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
IG G VYKG +++ F +E+G++ H N +G+
Sbjct: 43 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 210 STENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXX 269
ST+ +V Q+ SL L E IA A+G+ YL
Sbjct: 100 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL-- 157
Query: 270 XKASNILLSEDYEAQISDFGLAKWLPDNWS-HHIVFPIEGTFGYLSPEYFM---HGIVDE 325
K++NI L ED +I DFGLA + WS H + G+ +++PE
Sbjct: 158 -KSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 215
Query: 326 KTDVFAFGVLLLELITGR 343
++DV+AFG++L EL+TG+
Sbjct: 216 QSDVYAFGIVLYELMTGQ 233
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 16/217 (7%)
Query: 133 DFAELAAATDNFNSENLIGKGGHAEVYKG--CLPDGEXXXXXXXXXXXXEDEERISDFLS 190
+FA+ AT N + + ++G G EV G LP + E++ DFL
Sbjct: 37 EFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 191 ELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIAL- 248
E I+ +HPN +L G T++ +V +++ +GSL S L ++T+ + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGML 153
Query: 249 -GIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE 307
GIA G++YL A NIL++ + ++SDFGL++ L D+ +
Sbjct: 154 RGIASGMKYLSDMGFVHRDLA---ARNILINSNLVCKVSDFGLSRVLEDD--PEAAYTTR 208
Query: 308 G---TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
G + SPE + +DV+++G++L E+++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 15/166 (9%)
Query: 185 ISDFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLF---GSTECLEWT 241
+ FL+E ++ + H KL T+ +++ +F+ GSL L GS + L
Sbjct: 227 VEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL 286
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---W 298
I + + IAEG+ ++ +A+NIL+S +I+DFGLA+ + DN
Sbjct: 287 IDF--SAQIAEGMAFIEQRNYIHRDL---RAANILVSASLVCKIADFGLARVIEDNEYTA 341
Query: 299 SHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE G K+DV++FG+LL+E++T R
Sbjct: 342 REGAKFPIKWT----APEAINFGSFTIKSDVWSFGILLMEIVTYGR 383
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 13/162 (8%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR--YK 245
FL+E ++ + H +L T+ +++ +++ +GSL L + ++ TI
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLD 113
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPD---NWSHHI 302
+A IAEG+ ++ +A+NIL+S+ +I+DFGLA+ + D
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDL---RAANILVSDTLSCKIADFGLARLIEDAEXTAREGA 170
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE +G K+DV++FG+LL E++T R
Sbjct: 171 KFPIKWT----APEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 15/166 (9%)
Query: 185 ISDFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLF---GSTECLEWT 241
+ FL+E ++ + H KL T+ +++ +F+ GSL L GS + L
Sbjct: 54 VEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL 113
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---W 298
I + + IAEG+ ++ +A+NIL+S +I+DFGLA+ + DN
Sbjct: 114 IDF--SAQIAEGMAFIEQRNYIHRDL---RAANILVSASLVCKIADFGLARVIEDNEYTA 168
Query: 299 SHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE G K+DV++FG+LL+E++T R
Sbjct: 169 REGAKFPIKWT----APEAINFGSFTIKSDVWSFGILLMEIVTYGR 210
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 102/217 (47%), Gaps = 16/217 (7%)
Query: 133 DFAELAAATDNFNSENLIGKGGHAEVYKG--CLPDGEXXXXXXXXXXXXEDEERISDFLS 190
+FA+ AT N + + ++G G EV G LP + E++ DFL
Sbjct: 37 EFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 191 ELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIAL- 248
E I+ +HPN +L G T++ +V +++ +GSL S L ++T+ + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGML 153
Query: 249 -GIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE 307
GIA G++YL A NIL++ + ++SDFGL + L D+ +
Sbjct: 154 RGIASGMKYLSDMGYVHRDLA---ARNILINSNLVCKVSDFGLGRVLEDD--PEAAYTTR 208
Query: 308 G---TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
G + SPE + +DV+++G++L E+++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 11/198 (5%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
IG G VYKG +++ F +E+G++ H N +G+
Sbjct: 44 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 210 STENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXX 269
ST+ +V Q+ SL L E IA A+G+ YL
Sbjct: 101 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL-- 158
Query: 270 XKASNILLSEDYEAQISDFGLAKWLPDNWS-HHIVFPIEGTFGYLSPEYFM---HGIVDE 325
K++NI L ED +I DFGLA + WS H + G+ +++PE
Sbjct: 159 -KSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 326 KTDVFAFGVLLLELITGR 343
++DV+AFG++L EL+TG+
Sbjct: 217 QSDVYAFGIVLYELMTGQ 234
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 11/198 (5%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
IG G VYKG +++ F +E+G++ H N +G+
Sbjct: 18 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 210 STENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXX 269
ST+ +V Q+ SL L E IA A+G+ YL
Sbjct: 75 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL-- 132
Query: 270 XKASNILLSEDYEAQISDFGLAKWLPDNWS-HHIVFPIEGTFGYLSPEYFM---HGIVDE 325
K++NI L ED +I DFGLA + WS H + G+ +++PE
Sbjct: 133 -KSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 190
Query: 326 KTDVFAFGVLLLELITGR 343
++DV+AFG++L EL+TG+
Sbjct: 191 QSDVYAFGIVLYELMTGQ 208
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 122/278 (43%), Gaps = 25/278 (8%)
Query: 143 NFNSENLIGKGGHAEVYKG-CLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHP 201
NF E IG+G +EVY+ CL DG D + +D + E+ ++ +NHP
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 202 NAAKLIG-FSTENGFHLVLQFLPHGSLSSLL--FGSTECL--EWTIRYKIALGIAEGLQY 256
N K F +N ++VL+ G LS ++ F + L E T+ +K + + L++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTV-WKYFVQLCSALEH 151
Query: 257 LXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWS--HHIVFPIEGTFGYLS 314
+ K +N+ ++ ++ D GL ++ + H +V GT Y+S
Sbjct: 152 MHSRRVMHRDI---KPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV----GTPYYMS 204
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPLLQTSNFKELVDPRL 374
PE + K+D+++ G LL E+ + + +L K + Q P
Sbjct: 205 PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD-----YPPLP 259
Query: 375 ADAYDLAEMKRAMLTASVCIHHLSTMRPQMTRVLQLLR 412
+D Y +E R ++ ++CI+ RP +T V + +
Sbjct: 260 SDHY--SEELRQLV--NMCINPDPEKRPDVTYVYDVAK 293
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 11/198 (5%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
IG G VYKG +++ F +E+G++ H N +G+
Sbjct: 21 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 210 STENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXX 269
ST+ +V Q+ SL L E IA A+G+ YL
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL-- 135
Query: 270 XKASNILLSEDYEAQISDFGLAKWLPDNWS-HHIVFPIEGTFGYLSPEYFM---HGIVDE 325
K++NI L ED +I DFGLA + WS H + G+ +++PE
Sbjct: 136 -KSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 326 KTDVFAFGVLLLELITGR 343
++DV+AFG++L EL+TG+
Sbjct: 194 QSDVYAFGIVLYELMTGQ 211
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 11/198 (5%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
IG G VYKG +++ F +E+G++ H N +G+
Sbjct: 21 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 210 STENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXX 269
ST+ +V Q+ SL L E IA A+G+ YL
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL-- 135
Query: 270 XKASNILLSEDYEAQISDFGLAKWLPDNWS-HHIVFPIEGTFGYLSPEYFM---HGIVDE 325
K++NI L ED +I DFGLA + WS H + G+ +++PE
Sbjct: 136 -KSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 326 KTDVFAFGVLLLELITGR 343
++DV+AFG++L EL+TG+
Sbjct: 194 QSDVYAFGIVLYELMTGQ 211
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 11/198 (5%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
IG G VYKG +++ F +E+G++ H N +G+
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 210 STENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXX 269
ST+ +V Q+ SL L E IA A+G+ YL
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL-- 130
Query: 270 XKASNILLSEDYEAQISDFGLAKWLPDNWS-HHIVFPIEGTFGYLSPEYFM---HGIVDE 325
K++NI L ED +I DFGLA + WS H + G+ +++PE
Sbjct: 131 -KSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 326 KTDVFAFGVLLLELITGR 343
++DV+AFG++L EL+TG+
Sbjct: 189 QSDVYAFGIVLYELMTGQ 206
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGST-ECLEWTIRYKI 246
FL E ++ + H +L +E ++V +++ GSL L G + L +
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHIV 303
A IA G+ Y+ A+NIL+ E+ +++DFGLA+ + DN
Sbjct: 120 AAQIASGMAYVERMNYVHRDLA---AANILVGENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 304 FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE ++G K+DV++FG+LL EL T R
Sbjct: 177 FPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 102/217 (47%), Gaps = 16/217 (7%)
Query: 133 DFAELAAATDNFNSENLIGKGGHAEVYKG--CLPDGEXXXXXXXXXXXXEDEERISDFLS 190
+FA+ AT N + + ++G G EV G LP + E++ DFL
Sbjct: 37 EFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 191 ELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIAL- 248
E I+ +HPN +L G T++ +V + + +GSL S L ++T+ + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQLVGML 153
Query: 249 -GIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE 307
GIA G++YL A NIL++ + ++SDFGL++ L D+ +
Sbjct: 154 RGIASGMKYLSDMGAVHRDLA---ARNILINSNLVCKVSDFGLSRVLEDD--PEAAYTTR 208
Query: 308 G---TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
G + SPE + +DV+++G++L E+++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGST-ECLEWTIRYKI 246
FL E ++ + H +L +E ++V +++ G L L G + L +
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDM 119
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHIV 303
A IA G+ Y+ +A+NIL+ E+ +++DFGLA+ + DN
Sbjct: 120 AAQIASGMAYVERMNYVHRDL---RAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 304 FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE ++G K+DV++FG+LL EL T R
Sbjct: 177 FPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 102/217 (47%), Gaps = 16/217 (7%)
Query: 133 DFAELAAATDNFNSENLIGKGGHAEVYKG--CLPDGEXXXXXXXXXXXXEDEERISDFLS 190
+FA+ AT N + + ++G G EV G LP + E++ DFL
Sbjct: 8 EFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 66
Query: 191 ELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIAL- 248
E I+ +HPN +L G T++ +V + + +GSL S L ++T+ + +
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQLVGML 124
Query: 249 -GIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE 307
GIA G++YL A NIL++ + ++SDFGL++ L D+ +
Sbjct: 125 RGIASGMKYLSDMGYVHRDLA---ARNILINSNLVCKVSDFGLSRVLEDD--PEAAYTTR 179
Query: 308 G---TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
G + SPE + +DV+++G++L E+++
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 18/203 (8%)
Query: 148 NLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXEDEERISD--FLSELGIVAHINHPNAA 204
++G G VYKG +PDGE E+ ++ L E ++A + P +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 205 KLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGLQYLX 258
+L+G + LV Q +P+G L + GS + L W ++ IA+G+ YL
Sbjct: 83 RLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQ------IAKGMSYLE 136
Query: 259 XXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYF 318
A N+L+ +I+DFGLA+ L + + + + +++ E
Sbjct: 137 DVRLVHRDLA---ARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESI 193
Query: 319 MHGIVDEKTDVFAFGVLLLELIT 341
+ ++DV+++GV + EL+T
Sbjct: 194 LRRRFTHQSDVWSYGVTVWELMT 216
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 102/217 (47%), Gaps = 16/217 (7%)
Query: 133 DFAELAAATDNFNSENLIGKGGHAEVYKG--CLPDGEXXXXXXXXXXXXEDEERISDFLS 190
+FA+ AT N + + ++G G EV G LP + E++ DFL
Sbjct: 37 EFAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 191 ELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIAL- 248
E I+ +HPN +L G T++ +V + + +GSL S L ++T+ + +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQLVGML 153
Query: 249 -GIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE 307
GIA G++YL A NIL++ + ++SDFGL++ L D+ +
Sbjct: 154 RGIASGMKYLSDMGYVHRDLA---ARNILINSNLVCKVSDFGLSRVLEDD--PEAAYTTR 208
Query: 308 G---TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
G + SPE + +DV+++G++L E+++
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGST-ECLEWTIRYKI 246
FL E ++ + H +L +E ++V +++ GSL L G + L +
Sbjct: 227 FLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 286
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHIV 303
A IA G+ Y+ +A+NIL+ E+ +++DFGL + + DN
Sbjct: 287 AAQIASGMAYVERMNYVHRDL---RAANILVGENLVCKVADFGLGRLIEDNEYTARQGAK 343
Query: 304 FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE ++G K+DV++FG+LL EL T R
Sbjct: 344 FPIKWT----APEAALYGRFTIKSDVWSFGILLTELTTKGR 380
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 11/198 (5%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
IG G VYKG +++ F +E+G++ H N +G+
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 210 STENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXX 269
ST +V Q+ SL L E IA A+G+ YL
Sbjct: 73 STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL-- 130
Query: 270 XKASNILLSEDYEAQISDFGLAKWLPDNWS-HHIVFPIEGTFGYLSPEYFM---HGIVDE 325
K++NI L ED +I DFGLA + WS H + G+ +++PE
Sbjct: 131 -KSNNIFLHEDLTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 326 KTDVFAFGVLLLELITGR 343
++DV+AFG++L EL+TG+
Sbjct: 189 QSDVYAFGIVLYELMTGQ 206
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 11/198 (5%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
IG G VYKG +++ F +E+G++ H N +G+
Sbjct: 36 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 210 STENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXX 269
ST+ +V Q+ SL L E IA A+G+ YL
Sbjct: 93 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL-- 150
Query: 270 XKASNILLSEDYEAQISDFGLAKWLPDNWS-HHIVFPIEGTFGYLSPEYFM---HGIVDE 325
K++NI L ED +I DFGLA WS H + G+ +++PE
Sbjct: 151 -KSNNIFLHEDLTVKIGDFGLAT-EKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 208
Query: 326 KTDVFAFGVLLLELITGR 343
++DV+AFG++L EL+TG+
Sbjct: 209 QSDVYAFGIVLYELMTGQ 226
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 11/198 (5%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
IG G VYKG +++ F +E+G++ H N +G+
Sbjct: 44 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 210 STENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXX 269
ST+ +V Q+ SL L E IA A+G+ YL
Sbjct: 101 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL-- 158
Query: 270 XKASNILLSEDYEAQISDFGLAKWLPDNWS-HHIVFPIEGTFGYLSPEYFM---HGIVDE 325
K++NI L ED +I DFGLA WS H + G+ +++PE
Sbjct: 159 -KSNNIFLHEDLTVKIGDFGLAT-EKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 216
Query: 326 KTDVFAFGVLLLELITGR 343
++DV+AFG++L EL+TG+
Sbjct: 217 QSDVYAFGIVLYELMTGQ 234
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 130 KNFDFAELAAATDNF--------NSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXE- 180
++ D A LA D +S+ +IGKG VY G D
Sbjct: 1 RDLDSALLAEVKDVLIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI 60
Query: 181 -DEERISDFLSELGIVAHINHPNAAKLIG--FSTENGFHLVLQFLPHGSLSSLLFGSTEC 237
+ +++ FL E ++ +NHPN LIG E H++L ++ HG L L F +
Sbjct: 61 TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDL--LQFIRSPQ 118
Query: 238 LEWTIRYKIALG--IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP 295
T++ I+ G +A G++YL A N +L E + +++DFGLA+ +
Sbjct: 119 RNPTVKDLISFGLQVARGMEYLAEQKFVHRDL---AARNCMLDESFTVKVADFGLARDIL 175
Query: 296 DNWSH------HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
D + H P++ T + E K+DV++FGVLL EL+T
Sbjct: 176 DREYYSVQQHRHARLPVKWT----ALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 149 LIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKL 206
+IG+G VY G L DG+ D +S FL+E I+ +HPN L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 207 IGFS--TENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG--IAEGLQYLXXXXX 262
+G +E +VL ++ HG L + + T T++ I G +A+G+++L
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLASKKF 152
Query: 263 XXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNW--SHHIVFPIEGTFGYLSPEYFMH 320
A N +L E + +++DFGLA+ + D S H + +++ E
Sbjct: 153 VHRDLA---ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 209
Query: 321 GIVDEKTDVFAFGVLLLELIT 341
K+DV++FGVLL EL+T
Sbjct: 210 QKFTTKSDVWSFGVLLWELMT 230
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 149 LIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKL 206
+IG+G VY G L DG+ D +S FL+E I+ +HPN L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 207 IGFS--TENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG--IAEGLQYLXXXXX 262
+G +E +VL ++ HG L + + T T++ I G +A+G+++L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLASKKF 154
Query: 263 XXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNW--SHHIVFPIEGTFGYLSPEYFMH 320
A N +L E + +++DFGLA+ + D S H + +++ E
Sbjct: 155 VHRDLA---ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 321 GIVDEKTDVFAFGVLLLELIT 341
K+DV++FGVLL EL+T
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT 232
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 11/198 (5%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
IG G VYKG +++ F +E+G++ H N +G+
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 210 STENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXX 269
ST+ +V Q+ SL L E IA A+G+ YL
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL-- 130
Query: 270 XKASNILLSEDYEAQISDFGLAKWLPDNWS-HHIVFPIEGTFGYLSPEYFM---HGIVDE 325
K++NI L ED +I DFGLA WS H + G+ +++PE
Sbjct: 131 -KSNNIFLHEDLTVKIGDFGLAT-EKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 326 KTDVFAFGVLLLELITGR 343
++DV+AFG++L EL+TG+
Sbjct: 189 QSDVYAFGIVLYELMTGQ 206
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 149 LIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKL 206
+IG+G VY G L DG+ D +S FL+E I+ +HPN L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 207 IGFS--TENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG--IAEGLQYLXXXXX 262
+G +E +VL ++ HG L + + T T++ I G +A+G+++L
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLASKKF 213
Query: 263 XXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNW--SHHIVFPIEGTFGYLSPEYFMH 320
A N +L E + +++DFGLA+ + D S H + +++ E
Sbjct: 214 VHRDLA---ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 270
Query: 321 GIVDEKTDVFAFGVLLLELIT 341
K+DV++FGVLL EL+T
Sbjct: 271 QKFTTKSDVWSFGVLLWELMT 291
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 149 LIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKL 206
+IG+G VY G L DG+ D +S FL+E I+ +HPN L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 207 IGFS--TENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG--IAEGLQYLXXXXX 262
+G +E +VL ++ HG L + + T T++ I G +A+G+++L
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLASKKF 155
Query: 263 XXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNW--SHHIVFPIEGTFGYLSPEYFMH 320
A N +L E + +++DFGLA+ + D S H + +++ E
Sbjct: 156 VHRDLA---ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 321 GIVDEKTDVFAFGVLLLELIT 341
K+DV++FGVLL EL+T
Sbjct: 213 QKFTTKSDVWSFGVLLWELMT 233
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 149 LIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKL 206
+IG+G VY G L DG+ D +S FL+E I+ +HPN L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 207 IGFS--TENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG--IAEGLQYLXXXXX 262
+G +E +VL ++ HG L + + T T++ I G +A+G+++L
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLASKKF 159
Query: 263 XXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNW--SHHIVFPIEGTFGYLSPEYFMH 320
A N +L E + +++DFGLA+ + D S H + +++ E
Sbjct: 160 VHRDLA---ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 216
Query: 321 GIVDEKTDVFAFGVLLLELIT 341
K+DV++FGVLL EL+T
Sbjct: 217 QKFTTKSDVWSFGVLLWELMT 237
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 149 LIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKL 206
+IG+G VY G L DG+ D +S FL+E I+ +HPN L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 207 IGFS--TENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG--IAEGLQYLXXXXX 262
+G +E +VL ++ HG L + + T T++ I G +A+G+++L
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLASKKF 155
Query: 263 XXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNW--SHHIVFPIEGTFGYLSPEYFMH 320
A N +L E + +++DFGLA+ + D S H + +++ E
Sbjct: 156 VHRDLA---ARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 321 GIVDEKTDVFAFGVLLLELIT 341
K+DV++FGVLL EL+T
Sbjct: 213 QKFTTKSDVWSFGVLLWELMT 233
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 149 LIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKL 206
+IG+G VY G L DG+ D +S FL+E I+ +HPN L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 207 IGFS--TENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG--IAEGLQYLXXXXX 262
+G +E +VL ++ HG L + + T T++ I G +A+G+++L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETH--NPTVKDLIGFGLQVAKGMKFLASKKF 154
Query: 263 XXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNW--SHHIVFPIEGTFGYLSPEYFMH 320
A N +L E + +++DFGLA+ + D S H + +++ E
Sbjct: 155 VHRDLA---ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 321 GIVDEKTDVFAFGVLLLELIT 341
K+DV++FGVLL EL+T
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT 232
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 181 DEERISDFLSELGIVAHINHPNAAKLIGFSTENG---FHLVLQFLPHGSLSSLLFGSTEC 237
D++R DF E+ I+ ++ K G S G LV+++LP G L L
Sbjct: 53 DQQR--DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR 110
Query: 238 LEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN 297
L+ + + I +G++YL A NIL+ + +I+DFGLAK LP +
Sbjct: 111 LDASRLLLYSSQICKGMEYLGSRRCVHRDLA---ARNILVESEAHVKIADFGLAKLLPLD 167
Query: 298 WSHHIVF-PIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+++V P + + +PE I ++DV++FGV+L EL T
Sbjct: 168 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 181 DEERISDFLSELGIVAHINHPNAAKLIGFSTENG---FHLVLQFLPHGSLSSLLFGSTEC 237
D++R DF E+ I+ ++ K G S G LV+++LP G L L
Sbjct: 54 DQQR--DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR 111
Query: 238 LEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN 297
L+ + + I +G++YL A NIL+ + +I+DFGLAK LP +
Sbjct: 112 LDASRLLLYSSQICKGMEYLGSRRCVHRDLA---ARNILVESEAHVKIADFGLAKLLPLD 168
Query: 298 WSHHIVF-PIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+++V P + + +PE I ++DV++FGV+L EL T
Sbjct: 169 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 103/235 (43%), Gaps = 14/235 (5%)
Query: 139 AATDNFNSENLIGKGGHAEVY---KGCLPD-GEXXXXXXXXXXXXEDEERISDFLSELGI 194
A +F ++G+G +V+ K PD G + +R+ + E I
Sbjct: 25 ADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKM-ERDI 83
Query: 195 VAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEG 253
+A +NHP KL F TE +L+L FL G L + L E +++ +A +A G
Sbjct: 84 LADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALG 142
Query: 254 LQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYL 313
L +L K NILL E+ +++DFGL+K D+ F GT Y+
Sbjct: 143 LDHLHSLGIIYRDL---KPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC--GTVEYM 197
Query: 314 SPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDS--RRQSLVIWAKPLLQTSNF 366
+PE D +++GVL+ E++TG R++++ + K L F
Sbjct: 198 APEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQF 252
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 147 ENLIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAA 204
E +IG G EV G L P E + DFLSE I+ +HPN
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 205 KLIGFSTENGFHLVL-QFLPHGSLSSLLFGSTECLEWTIRYKIAL--GIAEGLQYLXXXX 261
+L G T +++ +++ +GSL + L T ++TI + + G+ G++YL
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIMQLVGMLRGVGAGMRYL---S 168
Query: 262 XXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV-----FPIEGTFGYLSPE 316
A N+L+ + ++SDFGL++ L D+ PI T +PE
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWT----APE 224
Query: 317 YFMHGIVDEKTDVFAFGVLLLELIT 341
+DV++FGV++ E++
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 181 DEERISDFLSELGIVAHINHPNAAKLIGFSTENG---FHLVLQFLPHGSLSSLLFGSTEC 237
D++R DF E+ I+ ++ K G S G LV+++LP G L L
Sbjct: 66 DQQR--DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR 123
Query: 238 LEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN 297
L+ + + I +G++YL A NIL+ + +I+DFGLAK LP +
Sbjct: 124 LDASRLLLYSSQICKGMEYLGSRRCVHRDLA---ARNILVESEAHVKIADFGLAKLLPLD 180
Query: 298 WSHHIVF-PIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+++V P + + +PE I ++DV++FGV+L EL T
Sbjct: 181 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 24/227 (10%)
Query: 187 DFLSELGIVAHINHPNAAKLIGF-STENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYK 245
+F E + ++HP K G S E ++V +++ +G L + L + LE + +
Sbjct: 49 EFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLE 108
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV-- 303
+ + EG+ +L A N L+ D ++SDFG+ +++ D+ V
Sbjct: 109 MCYDVCEGMAFLESHQFIHRDLA---ARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGT 165
Query: 304 -FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT-GRRAVDSRRQSLVIWAKPLL 361
FP++ + +PE F + K+DV+AFG+L+ E+ + G+ D S V+ L
Sbjct: 166 KFPVKWS----APEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVV-----L 216
Query: 362 QTSNFKELVDPRLADAYDLAEMKRAMLTASVCIHHLSTMRPQMTRVL 408
+ S L P LA + + M + C H L RP ++L
Sbjct: 217 KVSQGHRLYRPHLAS----DTIYQIMYS---CWHELPEKRPTFQQLL 256
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 147 ENLIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAA 204
E +IG G EV G L P E + DFLSE I+ +HPN
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 205 KLIGFSTENGFHLVL-QFLPHGSLSSLLFGSTECLEWTIRYKIAL--GIAEGLQYLXXXX 261
+L G T +++ +++ +GSL + L T ++TI + + G+ G++YL
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIMQLVGMLRGVGAGMRYL---S 168
Query: 262 XXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV-----FPIEGTFGYLSPE 316
A N+L+ + ++SDFGL++ L D+ PI T +PE
Sbjct: 169 DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWT----APE 224
Query: 317 YFMHGIVDEKTDVFAFGVLLLELIT 341
+DV++FGV++ E++
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLA 249
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 11/162 (6%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLF-GSTECLEWTIRYKI 246
FL E I+ + H +L +E ++V +++ GSL L G L+ +
Sbjct: 51 FLEEAQIMKKLKHDKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDM 110
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN---WSHHIV 303
A +A G+ Y+ +++NIL+ +I+DFGLA+ + DN
Sbjct: 111 AAQVAAGMAYIERMNYIHRDL---RSANILVGNGLICKIADFGLARLIEDNEXTARQGAK 167
Query: 304 FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRA 345
FPI+ T +PE ++G K+DV++FG+LL EL+T R
Sbjct: 168 FPIKWT----APEAALYGRFTIKSDVWSFGILLTELVTKGRV 205
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 19/166 (11%)
Query: 191 ELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSL-------SSLLFGSTECLEWTI 242
E+ ++A++ HPN + ENG ++V+ + G L +LF + L+W +
Sbjct: 73 EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFV 132
Query: 243 RYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI 302
+ +AL + L K+ NI L++D Q+ DFG+A+ L N + +
Sbjct: 133 QICLALKHVHDRKILHRDI---------KSQNIFLTKDGTVQLGDFGIARVL--NSTVEL 181
Query: 303 VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDS 348
GT YLSPE + + K+D++A G +L EL T + A ++
Sbjct: 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA 227
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 30/182 (16%)
Query: 182 EERISDFLSELGIVAHI-NHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLL-------- 231
E+ +SD +SE+ ++ I H N L+G T++G ++++++ G+L L
Sbjct: 59 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 118
Query: 232 ---FGSTECLEWTIRYK----IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQ 284
+ + E + K A +A G++YL A N+L++ED +
Sbjct: 119 EYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA---ARNVLVTEDNVMK 175
Query: 285 ISDFGLAKWLPDNWSHHIVFPIEGTFG-----YLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
I+DFGLA+ + HHI + + T G +++PE I ++DV++FGVLL E+
Sbjct: 176 IADFGLARDI-----HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 230
Query: 340 IT 341
T
Sbjct: 231 FT 232
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 22/207 (10%)
Query: 147 ENLIGKGGHAEVYKGCLPDG----EXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPN 202
+ +IG G EVYKG L E +++R+ DFL E GI+ +H N
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV-DFLGEAGIMGQFSHHN 107
Query: 203 AAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIAL--GIAEGLQYLXX 259
+L G S ++ +++ +G+L L + E+++ + + GIA G++YL
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFL--REKDGEFSVLQLVGMLRGIAAGMKYLAN 165
Query: 260 XXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV-----FPIEGTFGYLS 314
A NIL++ + ++SDFGL++ L D+ PI T +
Sbjct: 166 MNYVHRDLA---ARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWT----A 218
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
PE + +DV++FG+++ E++T
Sbjct: 219 PEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 18/223 (8%)
Query: 129 WKNFDFAELAAATDNFNSENLIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERIS 186
W + +FA+ E +IG G EV +G L P + E +
Sbjct: 2 WGSMEFAK-EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRR 60
Query: 187 DFLSELGIVAHINHPNAAKLIGFSTENGFHLVL-QFLPHGSLSSLLFGSTECLEWTIRYK 245
+FLSE I+ HPN +L G T + ++L +F+ +G+L S L +
Sbjct: 61 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVG 120
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV-- 303
+ GIA G++YL A NIL++ + ++SDFGL+++L +N S
Sbjct: 121 MLRGIASGMRYLAEMSYVHRDLA---ARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTS 177
Query: 304 -----FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
PI T +PE +D +++G+++ E+++
Sbjct: 178 SLGGKIPIRWT----APEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 30/182 (16%)
Query: 182 EERISDFLSELGIVAHI-NHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLL-------- 231
E+ +SD +SE+ ++ I H N L+G T++G ++++++ G+L L
Sbjct: 66 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 125
Query: 232 ---FGSTECLEWTIRYK----IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQ 284
+ + E + K A +A G++YL A N+L++ED +
Sbjct: 126 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA---ARNVLVTEDNVMK 182
Query: 285 ISDFGLAKWLPDNWSHHIVFPIEGTFG-----YLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
I+DFGLA+ + HHI + + T G +++PE I ++DV++FGVLL E+
Sbjct: 183 IADFGLARDI-----HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 237
Query: 340 IT 341
T
Sbjct: 238 FT 239
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 30/182 (16%)
Query: 182 EERISDFLSELGIVAHI-NHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLL-------- 231
E+ +SD +SE+ ++ I H N L+G T++G ++++++ G+L L
Sbjct: 63 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 122
Query: 232 ---FGSTECLEWTIRYK----IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQ 284
+ + E + K A +A G++YL A N+L++ED +
Sbjct: 123 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA---ARNVLVTEDNVMK 179
Query: 285 ISDFGLAKWLPDNWSHHIVFPIEGTFG-----YLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
I+DFGLA+ + HHI + + T G +++PE I ++DV++FGVLL E+
Sbjct: 180 IADFGLARDI-----HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 234
Query: 340 IT 341
T
Sbjct: 235 FT 236
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 30/182 (16%)
Query: 182 EERISDFLSELGIVAHI-NHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLL-------- 231
E+ +SD +SE+ ++ I H N L+G T++G ++++++ G+L L
Sbjct: 67 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 126
Query: 232 ---FGSTECLEWTIRYK----IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQ 284
+ + E + K A +A G++YL A N+L++ED +
Sbjct: 127 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA---ARNVLVTEDNVMK 183
Query: 285 ISDFGLAKWLPDNWSHHIVFPIEGTFG-----YLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
I+DFGLA+ + HHI + + T G +++PE I ++DV++FGVLL E+
Sbjct: 184 IADFGLARDI-----HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 238
Query: 340 IT 341
T
Sbjct: 239 FT 240
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 19/163 (11%)
Query: 185 ISDFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLF---GSTECLEWT 241
+ FL+E ++ + H KL T+ +++ +F+ GSL L GS + L
Sbjct: 221 VEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL 280
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
I + + IAEG+ ++ +A+NIL+S +I+DFGLA+
Sbjct: 281 IDF--SAQIAEGMAFIEQRNYIHRDL---RAANILVSASLVCKIADFGLAR-------VG 328
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
FPI+ T +PE G K+DV++FG+LL+E++T R
Sbjct: 329 AKFPIKWT----APEAINFGSFTIKSDVWSFGILLMEIVTYGR 367
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 30/182 (16%)
Query: 182 EERISDFLSELGIVAHI-NHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLL-------- 231
E+ +SD +SE+ ++ I H N L+G T++G ++++++ G+L L
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 133
Query: 232 ---FGSTECLEWTIRYK----IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQ 284
+ + E + K A +A G++YL A N+L++ED +
Sbjct: 134 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA---ARNVLVTEDNVMK 190
Query: 285 ISDFGLAKWLPDNWSHHIVFPIEGTFG-----YLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
I+DFGLA+ + HHI + + T G +++PE I ++DV++FGVLL E+
Sbjct: 191 IADFGLARDI-----HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
Query: 340 IT 341
T
Sbjct: 246 FT 247
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 181 DEERISDFLSELGIVAHINHPNAAKLIGFSTENG---FHLVLQFLPHGSLSSLLFGSTEC 237
D++R DF E+ I+ ++ K G S G LV+++LP G L L
Sbjct: 50 DQQR--DFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR 107
Query: 238 LEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN 297
L+ + + I +G++YL A NIL+ + +I+DFGLAK LP +
Sbjct: 108 LDASRLLLYSSQICKGMEYLGSRRCVHRDLA---ARNILVESEAHVKIADFGLAKLLPLD 164
Query: 298 WSHHIVF-PIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+V P + + +PE I ++DV++FGV+L EL T
Sbjct: 165 KDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 30/182 (16%)
Query: 182 EERISDFLSELGIVAHI-NHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLL-------- 231
E+ +SD +SE+ ++ I H N L+G T++G ++++++ G+L L
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGL 133
Query: 232 ---FGSTECLEWTIRYK----IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQ 284
+ + E + K A +A G++YL A N+L++ED +
Sbjct: 134 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA---ARNVLVTEDNVMK 190
Query: 285 ISDFGLAKWLPDNWSHHIVFPIEGTFG-----YLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
I+DFGLA+ + HHI + + T G +++PE I ++DV++FGVLL E+
Sbjct: 191 IADFGLARDI-----HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
Query: 340 IT 341
T
Sbjct: 246 FT 247
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 30/182 (16%)
Query: 182 EERISDFLSELGIVAHI-NHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLL-------- 231
E+ +SD +SE+ ++ I H N L+G T++G ++++++ G+L L
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 133
Query: 232 ---FGSTECLEWTIRYK----IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQ 284
F + E + K A +A G++YL A N+L++ED +
Sbjct: 134 EFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA---ARNVLVTEDNVMK 190
Query: 285 ISDFGLAKWLPDNWSHHIVFPIEGTFG-----YLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
I+DFGLA+ + HHI + T G +++PE I ++DV++FGVLL E+
Sbjct: 191 IADFGLARDI-----HHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
Query: 340 IT 341
T
Sbjct: 246 FT 247
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 30/182 (16%)
Query: 182 EERISDFLSELGIVAHI-NHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLL-------- 231
E+ +SD +SE+ ++ I H N L+G T++G ++++++ G+L L
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 133
Query: 232 ---FGSTECLEWTIRYK----IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQ 284
+ + E + K A +A G++YL A N+L++ED +
Sbjct: 134 EYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA---ARNVLVTEDNVMK 190
Query: 285 ISDFGLAKWLPDNWSHHIVFPIEGTFG-----YLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
I+DFGLA+ + HHI + + T G +++PE I ++DV++FGVLL E+
Sbjct: 191 IADFGLARDI-----HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
Query: 340 IT 341
T
Sbjct: 246 FT 247
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 147 ENLIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAA 204
E +IG G EV +G L P + E + +FLSE I+ HPN
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 205 KLIGFSTENGFHLVL-QFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXX 263
+L G T + ++L +F+ +G+L S L + + GIA G++YL
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYV 140
Query: 264 XXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT-------FGYLSPE 316
A NIL++ + ++SDFGL+++L +N S P E + + +PE
Sbjct: 141 HRDLA---ARNILVNSNLVCKVSDFGLSRFLEENSSD----PTETSSLGGKIPIRWTAPE 193
Query: 317 YFMHGIVDEKTDVFAFGVLLLELIT 341
+D +++G+++ E+++
Sbjct: 194 AIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 11/201 (5%)
Query: 147 ENLIGKGGHAEVYKG--CLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAA 204
E +IG G EV G LP E++ DFL E I+ +HPN
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 205 KLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXX 263
L G T +V++F+ +G+L + L + GIA G++YL
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYV 167
Query: 264 XXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEG---TFGYLSPEYFMH 320
A NIL++ + ++SDFGL++ + D+ V+ G + +PE +
Sbjct: 168 HRDLA---ARNILVNSNLVCKVSDFGLSRVIEDD--PEAVYTTTGGKIPVRWTAPEAIQY 222
Query: 321 GIVDEKTDVFAFGVLLLELIT 341
+DV+++G+++ E+++
Sbjct: 223 RKFTSASDVWSYGIVMWEVMS 243
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 185 ISDFLSELGIVAHINHPNAAKLIGFST-ENGFHLVLQFLPHGSLSSLLF---GSTECLEW 240
+ FL E ++ + H +L T E +++ +++ GSL L G L
Sbjct: 52 VQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPK 111
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN--- 297
I + + IAEG+ Y+ +A+N+L+SE +I+DFGLA+ + DN
Sbjct: 112 LIDF--SAQIAEGMAYIERKNYIHRDL---RAANVLVSESLMCKIADFGLARVIEDNEYT 166
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
FPI+ T +PE G K+DV++FG+LL E++T
Sbjct: 167 AREGAKFPIKWT----APEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTE--NGFHLVLQFLPHGSLSSLLFG-STECLEWTIRY 244
FL+E ++ + H N +L+G E G ++V +++ GSL L L
Sbjct: 52 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 111
Query: 245 KIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVF 304
K +L + E ++YL A N+L+SED A++SDFGL K
Sbjct: 112 KFSLDVCEAMEYLEGNNFVHRDLA---ARNVLVSEDNVAKVSDFGLTKEASSTQDTG-KL 167
Query: 305 PIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
P++ T +PE K+DV++FG+LL E+ + R
Sbjct: 168 PVKWT----APEALREAAFSTKSDVWSFGILLWEIYSFGR 203
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 9/179 (5%)
Query: 191 ELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E I+ +NHP KL F TE +L+L FL G L + L E +++ +A
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-E 134
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
+A L +L K NILL E+ +++DFGL+K D+ F GT
Sbjct: 135 LALALDHLHSLGIIYRDL---KPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--GT 189
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDS--RRQSLVIWAKPLLQTSNF 366
Y++PE + D ++FGVL+ E++TG R++++ + K L F
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF 248
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 30/182 (16%)
Query: 182 EERISDFLSELGIVAHI-NHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLL-------- 231
E+ +SD +SE+ ++ I H N L+G T++G ++++++ G+L L
Sbjct: 115 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGL 174
Query: 232 ---FGSTECLEWTIRYK----IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQ 284
+ + E + K A +A G++YL A N+L++ED +
Sbjct: 175 EYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA---ARNVLVTEDNVMK 231
Query: 285 ISDFGLAKWLPDNWSHHIVFPIEGTFG-----YLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
I+DFGLA+ + HHI + + T G +++PE I ++DV++FGVLL E+
Sbjct: 232 IADFGLARDI-----HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 286
Query: 340 IT 341
T
Sbjct: 287 FT 288
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 9/179 (5%)
Query: 191 ELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E I+ +NHP KL F TE +L+L FL G L + L E +++ +A
Sbjct: 77 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-E 135
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
+A L +L K NILL E+ +++DFGL+K D+ F GT
Sbjct: 136 LALALDHLHSLGIIYRDL---KPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--GT 190
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDS--RRQSLVIWAKPLLQTSNF 366
Y++PE + D ++FGVL+ E++TG R++++ + K L F
Sbjct: 191 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF 249
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 9/179 (5%)
Query: 191 ELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E I+ +NHP KL F TE +L+L FL G L + L E +++ +A
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-E 134
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
+A L +L K NILL E+ +++DFGL+K D+ F GT
Sbjct: 135 LALALDHLHSLGIIYRDL---KPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--GT 189
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDS--RRQSLVIWAKPLLQTSNF 366
Y++PE + D ++FGVL+ E++TG R++++ + K L F
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF 248
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 185 ISDFLSELGIVAHINHPNAAKLIGFST-ENGFHLVLQFLPHGSLSSLLF---GSTECLEW 240
+ FL E ++ + H +L T E +++ +F+ GSL L G L
Sbjct: 51 VQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPK 110
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN--- 297
I + + IAEG+ Y+ +A+N+L+SE +I+DFGLA+ + DN
Sbjct: 111 LIDF--SAQIAEGMAYIERKNYIHRDL---RAANVLVSESLMCKIADFGLARVIEDNEYT 165
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
FPI+ T +PE G K++V++FG+LL E++T
Sbjct: 166 AREGAKFPIKWT----APEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 13/196 (6%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLI-G 208
+G G +VYK + E + EE + D++ E+ I+A +HPN KL+
Sbjct: 45 LGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 209 FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXX 268
F EN ++++F G++ +++ L +I + + L L
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPL---TESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 269 XXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGI-----V 323
KA NIL + D + +++DFG++ F GT +++PE M
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI--GTPYWMAPEVVMCETSKDRPY 217
Query: 324 DEKTDVFAFGVLLLEL 339
D K DV++ G+ L+E+
Sbjct: 218 DYKADVWSLGITLIEM 233
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 24/206 (11%)
Query: 148 NLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXEDEER-----ISDFLSELGIVAHINHP 201
++G G V+KG +P+GE + R ++D + +G ++H
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIG---SLDHA 75
Query: 202 NAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGLQ 255
+ +L+G + LV Q+LP GSL + G L W ++ IA+G+
Sbjct: 76 HIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMY 129
Query: 256 YLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSP 315
YL A N+LL + Q++DFG+A LP + + + +++
Sbjct: 130 YLEEHGMVHRNLA---ARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 186
Query: 316 EYFMHGIVDEKTDVFAFGVLLLELIT 341
E G ++DV+++GV + EL+T
Sbjct: 187 ESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 13/196 (6%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLI-G 208
+G G +VYK + E + EE + D++ E+ I+A +HPN KL+
Sbjct: 45 LGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 209 FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXX 268
F EN ++++F G++ +++ L +I + + L L
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPL---TESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 269 XXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGI-----V 323
KA NIL + D + +++DFG++ F GT +++PE M
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI--GTPYWMAPEVVMCETSKDRPY 217
Query: 324 DEKTDVFAFGVLLLEL 339
D K DV++ G+ L+E+
Sbjct: 218 DYKADVWSLGITLIEM 233
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 24/206 (11%)
Query: 148 NLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXEDEER-----ISDFLSELGIVAHINHP 201
++G G V+KG +P+GE + R ++D + +G ++H
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIG---SLDHA 93
Query: 202 NAAKLIGFSTENGFHLVLQFLPHGSLSSLL------FGSTECLEWTIRYKIALGIAEGLQ 255
+ +L+G + LV Q+LP GSL + G L W ++ IA+G+
Sbjct: 94 HIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMY 147
Query: 256 YLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSP 315
YL A N+LL + Q++DFG+A LP + + + +++
Sbjct: 148 YLEEHGMVHRNLA---ARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 204
Query: 316 EYFMHGIVDEKTDVFAFGVLLLELIT 341
E G ++DV+++GV + EL+T
Sbjct: 205 ESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 29/170 (17%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTE--NGFHLVLQFLPHGSLSSLLFG-STECLEWTIRY 244
FL+E ++ + H N +L+G E G ++V +++ GSL L L
Sbjct: 46 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 105
Query: 245 KIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAK---------WLP 295
K +L + E ++YL A N+L+SED A++SDFGL K LP
Sbjct: 106 KFSLDVCEAMEYLEGNNFVHRDLA---ARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP 162
Query: 296 DNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRA 345
W+ +PE K+DV++FG+LL E+ + R
Sbjct: 163 VKWT--------------APEALREKKFSTKSDVWSFGILLWEIYSFGRV 198
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 39/174 (22%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTE--NGFHLVLQFLPHGSLSSLLFG------STECLE 239
FL+E ++ + H N +L+G E G ++V +++ GSL L +CL
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL- 291
Query: 240 WTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAK------- 292
K +L + E ++YL A N+L+SED A++SDFGL K
Sbjct: 292 ----LKFSLDVCEAMEYLEGNNFVHRDLA---ARNVLVSEDNVAKVSDFGLTKEASSTQD 344
Query: 293 --WLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
LP W+ +PE K+DV++FG+LL E+ + R
Sbjct: 345 TGKLPVKWT--------------APEALREKKFSTKSDVWSFGILLWEIYSFGR 384
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 188 FLSELGIVAHINHPNAAKLIGFSTE--NGFHLVLQFLPHGSLSSLLFG-STECLEWTIRY 244
FL+E ++ + H N +L+G E G ++V +++ GSL L L
Sbjct: 61 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 120
Query: 245 KIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVF 304
K +L + E ++YL A N+L+SED A++SDFGL K +
Sbjct: 121 KFSLDVCEAMEYLEGNNFVHRDLA---ARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL- 176
Query: 305 PIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
P++ T +PE K+DV++FG+LL E+ + R
Sbjct: 177 PVKWT----APEALREKKFSTKSDVWSFGILLWEIYSFGR 212
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 13/196 (6%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLI-G 208
+G G +VYK + E + EE + D++ E+ I+A +HPN KL+
Sbjct: 45 LGDGAFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 209 FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXX 268
F EN ++++F G++ +++ L +I + + L L
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPL---TESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 269 XXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGI-----V 323
KA NIL + D + +++DFG++ F GT +++PE M
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI--GTPYWMAPEVVMCETSKDRPY 217
Query: 324 DEKTDVFAFGVLLLEL 339
D K DV++ G+ L+E+
Sbjct: 218 DYKADVWSLGITLIEM 233
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 36/224 (16%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLP-DGEXXXXXXXXXXXXEDEERISDFLSELGIVAHI-N 199
++ +++IG+G +V K + DG ++ DF EL ++ + +
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 200 HPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLLFGSTECLEWTIRYKIA----------- 247
HPN L+G G+ +L +++ PHG+L L S LE + IA
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKS-RVLETDPAFAIANSTASTLSSQQ 140
Query: 248 -----LGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI 302
+A G+ YL A NIL+ E+Y A+I+DFGL++
Sbjct: 141 LLHFAADVARGMDYLSQKQFIHRNLA---ARNILVGENYVAKIADFGLSR-------GQE 190
Query: 303 VFPIEGTFG-----YLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
V+ ++ T G +++ E + + +DV+++GVLL E+++
Sbjct: 191 VY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 142 DNFNSENLIGKGGHAEVYKG-CLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINH 200
D++ + +IG G A V C P E + + + L E+ ++ +H
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS--MDELLKEIQAMSQCHH 72
Query: 201 PN-AAKLIGFSTENGFHLVLQFLPHGSLSSLLFG-------STECLEWTIRYKIALGIAE 252
PN + F ++ LV++ L GS+ ++ + L+ + I + E
Sbjct: 73 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 253 GLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP---DNWSHHIVFPIEGT 309
GL+YL KA NILL ED QI+DFG++ +L D + + GT
Sbjct: 133 GLEYLHKNGQIHRDV---KAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 310 FGYLSPEYFMHGI--VDEKTDVFAFGVLLLELITG 342
+++PE M + D K D+++FG+ +EL TG
Sbjct: 190 PCWMAPE-VMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 36/224 (16%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLP-DGEXXXXXXXXXXXXEDEERISDFLSELGIVAHI-N 199
++ +++IG+G +V K + DG ++ DF EL ++ + +
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 200 HPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLLFGSTECLEWTIRYKIA----------- 247
HPN L+G G+ +L +++ PHG+L L S LE + IA
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKS-RVLETDPAFAIANSTASTLSSQQ 143
Query: 248 -----LGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI 302
+A G+ YL A NIL+ E+Y A+I+DFGL++
Sbjct: 144 LLHFAADVARGMDYLSQKQFIHRDLA---ARNILVGENYVAKIADFGLSR-------GQE 193
Query: 303 VFPIEGTFG-----YLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
V+ ++ T G +++ E + + +DV+++GVLL E+++
Sbjct: 194 VY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 4/160 (2%)
Query: 183 ERISDFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTI 242
E + DF+ E+ + ++H N +L G +V + P GSL L
Sbjct: 57 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT 116
Query: 243 RYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI 302
+ A+ +AEG+ YL A N+LL+ +I DFGL + LP N H++
Sbjct: 117 LSRYAVQVAEGMGYLESKRFIHRDLA---ARNLLLATRDLVKIGDFGLMRALPQNDDHYV 173
Query: 303 VFPIEGT-FGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ F + +PE +D + FGV L E+ T
Sbjct: 174 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 142 DNFNSENLIGKGGHAEVYKG-CLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINH 200
D++ + +IG G A V C P E + + + L E+ ++ +H
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS--MDELLKEIQAMSQCHH 67
Query: 201 PN-AAKLIGFSTENGFHLVLQFLPHGSLSSLLFG-------STECLEWTIRYKIALGIAE 252
PN + F ++ LV++ L GS+ ++ + L+ + I + E
Sbjct: 68 PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 127
Query: 253 GLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLP---DNWSHHIVFPIEGT 309
GL+YL KA NILL ED QI+DFG++ +L D + + GT
Sbjct: 128 GLEYLHKNGQIHRDV---KAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 310 FGYLSPEYF--MHGIVDEKTDVFAFGVLLLELITG 342
+++PE + G D K D+++FG+ +EL TG
Sbjct: 185 PCWMAPEVMEQVRG-YDFKADIWSFGITAIELATG 218
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 27/181 (14%)
Query: 185 ISDFLSELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTEC------ 237
+ D LSE ++ +NHP+ KL G +++G L++++ +GSL L S +
Sbjct: 70 LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLG 129
Query: 238 ---------LEWTIRYKIALG--------IAEGLQYLXXXXXXXXXXXXXKASNILLSED 280
L+ + +G I++G+QYL A NIL++E
Sbjct: 130 SGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLA---ARNILVAEG 186
Query: 281 YEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELI 340
+ +ISDFGL++ + + S+ +++ E I ++DV++FGVLL E++
Sbjct: 187 RKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
Query: 341 T 341
T
Sbjct: 247 T 247
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 16/188 (8%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 139
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 140 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GT 195
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDS-------RRQSLVIWAKPLLQ 362
YL PE + DEK D+++ GVL E + G+ ++ +R S V + P
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 255
Query: 363 TSNFKELV 370
T ++L+
Sbjct: 256 TEGARDLI 263
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 4/160 (2%)
Query: 183 ERISDFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTI 242
E + DF+ E+ + ++H N +L G +V + P GSL L
Sbjct: 63 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT 122
Query: 243 RYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI 302
+ A+ +AEG+ YL A N+LL+ +I DFGL + LP N H++
Sbjct: 123 LSRYAVQVAEGMGYLESKRFIHRDLA---ARNLLLATRDLVKIGDFGLMRALPQNDDHYV 179
Query: 303 VFPIEGT-FGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ F + +PE +D + FGV L E+ T
Sbjct: 180 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 36/224 (16%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLP-DGEXXXXXXXXXXXXEDEERISDFLSELGIVAHI-N 199
++ +++IG+G +V K + DG ++ DF EL ++ + +
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 200 HPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLLFGSTECLEWTIRYKIA----------- 247
HPN L+G G+ +L +++ PHG+L L S LE + IA
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKS-RVLETDPAFAIANSTASTLSSQQ 133
Query: 248 -----LGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI 302
+A G+ YL A NIL+ E+Y A+I+DFGL++
Sbjct: 134 LLHFAADVARGMDYLSQKQFIHRDLA---ARNILVGENYVAKIADFGLSR-------GQE 183
Query: 303 VFPIEGTFG-----YLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
V+ ++ T G +++ E + + +DV+++GVLL E+++
Sbjct: 184 VY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 4/160 (2%)
Query: 183 ERISDFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTI 242
E + DF+ E+ + ++H N +L G +V + P GSL L
Sbjct: 53 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT 112
Query: 243 RYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI 302
+ A+ +AEG+ YL A N+LL+ +I DFGL + LP N H++
Sbjct: 113 LSRYAVQVAEGMGYLESKRFIHRDLA---ARNLLLATRDLVKIGDFGLMRALPQNDDHYV 169
Query: 303 VFPIEGT-FGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ F + +PE +D + FGV L E+ T
Sbjct: 170 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 16/206 (7%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 139
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 140 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GT 195
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDS-------RRQSLVIWAKPLLQ 362
YL PE + DEK D+++ GVL E + G+ ++ +R S V + P
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 255
Query: 363 TSNFKELVDPRLADAYDLAEMKRAML 388
T ++L+ L M R +L
Sbjct: 256 TEGARDLISRLLKHNPSQRPMLREVL 281
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 4/160 (2%)
Query: 183 ERISDFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTI 242
E + DF+ E+ + ++H N +L G +V + P GSL L
Sbjct: 53 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT 112
Query: 243 RYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI 302
+ A+ +AEG+ YL A N+LL+ +I DFGL + LP N H++
Sbjct: 113 LSRYAVQVAEGMGYLESKRFIHRDLA---ARNLLLATRDLVKIGDFGLMRALPQNDDHYV 169
Query: 303 VFPIEGT-FGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ F + +PE +D + FGV L E+ T
Sbjct: 170 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 4/160 (2%)
Query: 183 ERISDFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTI 242
E + DF+ E+ + ++H N +L G +V + P GSL L
Sbjct: 57 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT 116
Query: 243 RYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI 302
+ A+ +AEG+ YL A N+LL+ +I DFGL + LP N H++
Sbjct: 117 LSRYAVQVAEGMGYLESKRFIHRDLA---ARNLLLATRDLVKIGDFGLMRALPQNDDHYV 173
Query: 303 VFPIEGT-FGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ F + +PE +D + FGV L E+ T
Sbjct: 174 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 16/188 (8%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSRFDEQRTATY 117
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL + E +I+DFG + P + + GT
Sbjct: 118 ITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC----GT 173
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDS-------RRQSLVIWAKPLLQ 362
YL PE + DEK D+++ GVL E + G ++ RR S V + P
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFV 233
Query: 363 TSNFKELV 370
T ++L+
Sbjct: 234 TEGARDLI 241
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 11/201 (5%)
Query: 147 ENLIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAA 204
E +IG G EV G L P +++ DFLSE I+ +HPN
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 205 KLIGFSTE-NGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXX 263
L G T+ ++ +++ +GSL + L + + GI G++YL
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAV 153
Query: 264 XXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEG---TFGYLSPEYFMH 320
A NIL++ + ++SDFG+++ L D+ + G + +PE +
Sbjct: 154 HRDLA---ARNILVNSNLVCKVSDFGMSRVLEDD--PEAAYTTRGGKIPIRWTAPEAIAY 208
Query: 321 GIVDEKTDVFAFGVLLLELIT 341
+DV+++G+++ E+++
Sbjct: 209 RKFTSASDVWSYGIVMWEVMS 229
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G + + + L + A
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEV----YKELQKLSKFDEQRTATY 118
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLX----GT 174
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
YL PE + DEK D+++ GVL E + G+
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 15/203 (7%)
Query: 147 ENLIGKGGHAEVYKG--CLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAA 204
E +IG G EV G LP E++ DFL E I+ +HPN
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 205 KLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXX 263
L G T++ +V +++ +GSL + L + + GI+ G++YL
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYV 146
Query: 264 XXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV-----FPIEGTFGYLSPEYF 318
A NIL++ + ++SDFGL++ L D+ PI T +PE
Sbjct: 147 HRDLA---ARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT----APEAI 199
Query: 319 MHGIVDEKTDVFAFGVLLLELIT 341
+DV+++G+++ E+++
Sbjct: 200 AFRKFTSASDVWSYGIVMWEVVS 222
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G + + + L + A
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEV----YKELQKLSKFDEQRTATY 118
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GT 174
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
YL PE + DEK D+++ GVL E + G+
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 11/201 (5%)
Query: 147 ENLIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAA 204
E +IG G EV G L P +++ DFLSE I+ +HPN
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 205 KLIGFSTE-NGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXX 263
L G T+ ++ +++ +GSL + L + + GI G++YL
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV 138
Query: 264 XXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEG---TFGYLSPEYFMH 320
A NIL++ + ++SDFG+++ L D+ + G + +PE +
Sbjct: 139 HRDLA---ARNILVNSNLVCKVSDFGMSRVLEDD--PEAAYTTRGGKIPIRWTAPEAIAY 193
Query: 321 GIVDEKTDVFAFGVLLLELIT 341
+DV+++G+++ E+++
Sbjct: 194 RKFTSASDVWSYGIVMWEVMS 214
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 115
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 116 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GT 171
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
YL PE + DEK D+++ GVL E + G+
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 11/201 (5%)
Query: 147 ENLIGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAA 204
E +IG G EV G L P +++ DFLSE I+ +HPN
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 205 KLIGFSTE-NGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXX 263
L G T+ ++ +++ +GSL + L + + GI G++YL
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV 132
Query: 264 XXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEG---TFGYLSPEYFMH 320
A NIL++ + ++SDFG+++ L D+ + G + +PE +
Sbjct: 133 HRDLA---ARNILVNSNLVCKVSDFGMSRVLEDD--PEAAYTTRGGKIPIRWTAPEAIAY 187
Query: 321 GIVDEKTDVFAFGVLLLELIT 341
+DV+++G+++ E+++
Sbjct: 188 RKFTSASDVWSYGIVMWEVMS 208
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 16/206 (7%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 113
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELC----GT 169
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDS-------RRQSLVIWAKPLLQ 362
YL PE + DEK D+++ GVL E + G+ ++ +R S V + P
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 229
Query: 363 TSNFKELVDPRLADAYDLAEMKRAML 388
T ++L+ L M R +L
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 8/172 (4%)
Query: 186 SDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRY 244
+ + EL ++ N P G F ++ + ++ + GSL +L + E I
Sbjct: 68 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILG 126
Query: 245 KIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVF 304
K+++ + +GL YL K SNIL++ E ++ DFG++ L D+ ++ V
Sbjct: 127 KVSIAVIKGLTYLREKHKIMHRDV--KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV- 183
Query: 305 PIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIW 356
GT Y+SPE ++D+++ G+ L+E+ GR + S S+ I+
Sbjct: 184 ---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIF 232
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 75 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 130
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 131 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GT 186
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
YL PE + DEK D+++ GVL E + G+
Sbjct: 187 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 16/188 (8%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSRFDEQRTATY 117
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL + E +I+DFG + P + + GT
Sbjct: 118 ITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLC----GT 173
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDS-------RRQSLVIWAKPLLQ 362
YL PE + DEK D+++ GVL E + G ++ RR S V + P
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFV 233
Query: 363 TSNFKELV 370
T ++L+
Sbjct: 234 TEGARDLI 241
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 114
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC----GT 170
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
YL PE + DEK D+++ GVL E + G+
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 114
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GT 170
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
YL PE + DEK D+++ GVL E + G+
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 116
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GT 172
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
YL PE + DEK D+++ GVL E + G+
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 113
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GT 169
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
YL PE + DEK D+++ GVL E + G+
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 16/188 (8%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 118
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GT 174
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDS-------RRQSLVIWAKPLLQ 362
YL PE + DEK D+++ GVL E + G+ ++ +R S V + P
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 234
Query: 363 TSNFKELV 370
T ++L+
Sbjct: 235 TEGARDLI 242
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 185 ISDFLSELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTEC------ 237
+ D LSE ++ +NHP+ KL G +++G L++++ +GSL L S +
Sbjct: 70 LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLG 129
Query: 238 ---------LEWTIRYKIALG--------IAEGLQYLXXXXXXXXXXXXXKASNILLSED 280
L+ + +G I++G+QYL A NIL++E
Sbjct: 130 SGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLA---ARNILVAEG 186
Query: 281 YEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELI 340
+ +ISDFGL++ + + S +++ E I ++DV++FGVLL E++
Sbjct: 187 RKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
Query: 341 T 341
T
Sbjct: 247 T 247
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 4/160 (2%)
Query: 183 ERISDFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTI 242
E + DF+ E+ + ++H N +L G +V + P GSL L
Sbjct: 63 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT 122
Query: 243 RYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI 302
+ A+ +AEG+ YL A N+LL+ +I DFGL + LP N H +
Sbjct: 123 LSRYAVQVAEGMGYLESKRFIHRDLA---ARNLLLATRDLVKIGDFGLMRALPQNDDHXV 179
Query: 303 VFPIEGT-FGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ F + +PE +D + FGV L E+ T
Sbjct: 180 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 118
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GT 174
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
YL PE + DEK D+++ GVL E + G+
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 185 ISDFLSELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTEC------ 237
+ D LSE ++ +NHP+ KL G +++G L++++ +GSL L S +
Sbjct: 70 LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLG 129
Query: 238 ---------LEWTIRYKIALG--------IAEGLQYLXXXXXXXXXXXXXKASNILLSED 280
L+ + +G I++G+QYL A NIL++E
Sbjct: 130 SGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLA---ARNILVAEG 186
Query: 281 YEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELI 340
+ +ISDFGL++ + + S +++ E I ++DV++FGVLL E++
Sbjct: 187 RKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
Query: 341 T 341
T
Sbjct: 247 T 247
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 16/206 (7%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 113
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GT 169
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDS-------RRQSLVIWAKPLLQ 362
YL PE + DEK D+++ GVL E + G+ ++ +R S V + P
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 229
Query: 363 TSNFKELVDPRLADAYDLAEMKRAML 388
T ++L+ L M R +L
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLREVL 255
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 16/188 (8%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 113
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GT 169
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDS-------RRQSLVIWAKPLLQ 362
YL PE + DEK D+++ GVL E + G+ ++ +R S V + P
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 229
Query: 363 TSNFKELV 370
T ++L+
Sbjct: 230 TEGARDLI 237
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 4/160 (2%)
Query: 183 ERISDFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTI 242
E + DF+ E+ + ++H N +L G +V + P GSL L
Sbjct: 53 EAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT 112
Query: 243 RYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI 302
+ A+ +AEG+ YL A N+LL+ +I DFGL + LP N H +
Sbjct: 113 LSRYAVQVAEGMGYLESKRFIHRDLA---ARNLLLATRDLVKIGDFGLMRALPQNDDHXV 169
Query: 303 VFPIEGT-FGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ F + +PE +D + FGV L E+ T
Sbjct: 170 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 16/188 (8%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 116
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GT 172
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDS-------RRQSLVIWAKPLLQ 362
YL PE + DEK D+++ GVL E + G+ ++ +R S V + P
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 232
Query: 363 TSNFKELV 370
T ++L+
Sbjct: 233 TEGARDLI 240
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 116
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GT 172
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
YL PE + DEK D+++ GVL E + G+
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 16/188 (8%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 113
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GT 169
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDS-------RRQSLVIWAKPLLQ 362
YL PE + DEK D+++ GVL E + G+ ++ +R S V + P
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 229
Query: 363 TSNFKELV 370
T ++L+
Sbjct: 230 TEGARDLI 237
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 17/158 (10%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 114
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI----VFP 305
I E L K N+LL E +I+DFG WS H
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------WSCHAPSSRRTT 166
Query: 306 IEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
+ GT YL PE + DEK D+++ GVL E + G+
Sbjct: 167 LSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 116
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GT 172
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
YL PE + DEK D+++ GVL E + G+
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 16/188 (8%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 113
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 114 ITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GT 169
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDS-------RRQSLVIWAKPLLQ 362
YL PE + DEK D+++ GVL E + G+ ++ +R S V + P
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFV 229
Query: 363 TSNFKELV 370
T ++L+
Sbjct: 230 TEGARDLI 237
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 16/188 (8%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 113
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLC----GT 169
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDS-------RRQSLVIWAKPLLQ 362
YL PE + DEK D+++ GVL E + G+ ++ +R S V + P
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 229
Query: 363 TSNFKELV 370
T ++L+
Sbjct: 230 TEGARDLI 237
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 88/208 (42%), Gaps = 6/208 (2%)
Query: 136 ELAAATDNFNSENLIGKGGHAEVYKGCLPD--GEXXXXXXXXXXXXEDEERISDFLSELG 193
+ A ++ ++G+G EVY+G + GE + F+SE
Sbjct: 18 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 77
Query: 194 IVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEG 253
I+ +++HP+ KLIG E ++++ P+G L L + L+ +L I +
Sbjct: 78 IMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKA 137
Query: 254 LQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYL 313
+ YL NIL++ ++ DFGL++++ D ++ ++
Sbjct: 138 MAYLESINCVHRDIA---VRNILVASPECVKLGDFGLSRYIEDE-DYYKASVTRLPIKWM 193
Query: 314 SPEYFMHGIVDEKTDVFAFGVLLLELIT 341
SPE +DV+ F V + E+++
Sbjct: 194 SPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 84/195 (43%), Gaps = 6/195 (3%)
Query: 149 LIGKGGHAEVYKGCLPD--GEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKL 206
++G+G EVY+G + GE + F+SE I+ +++HP+ KL
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 207 IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXX 266
IG E ++++ P+G L L + L+ +L I + + YL
Sbjct: 75 IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRD 134
Query: 267 XXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEK 326
NIL++ ++ DFGL++++ D ++ ++SPE
Sbjct: 135 IA---VRNILVASPECVKLGDFGLSRYIEDE-DYYKASVTRLPIKWMSPESINFRRFTTA 190
Query: 327 TDVFAFGVLLLELIT 341
+DV+ F V + E+++
Sbjct: 191 SDVWMFAVCMWEILS 205
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 84/195 (43%), Gaps = 6/195 (3%)
Query: 149 LIGKGGHAEVYKGCLPD--GEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKL 206
++G+G EVY+G + GE + F+SE I+ +++HP+ KL
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 207 IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXX 266
IG E ++++ P+G L L + L+ +L I + + YL
Sbjct: 79 IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRD 138
Query: 267 XXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEK 326
NIL++ ++ DFGL++++ D ++ ++SPE
Sbjct: 139 IA---VRNILVASPECVKLGDFGLSRYIEDE-DYYKASVTRLPIKWMSPESINFRRFTTA 194
Query: 327 TDVFAFGVLLLELIT 341
+DV+ F V + E+++
Sbjct: 195 SDVWMFAVCMWEILS 209
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 16/188 (8%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 117
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 118 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GT 173
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDS-------RRQSLVIWAKPLLQ 362
YL PE + DEK D+++ GVL E + G+ ++ +R S V + P
Sbjct: 174 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 233
Query: 363 TSNFKELV 370
T ++L+
Sbjct: 234 TEGARDLI 241
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 116
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GT 172
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
YL PE + DEK D+++ GVL E + G+
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 16/188 (8%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 57 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 112
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 113 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GT 168
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDS-------RRQSLVIWAKPLLQ 362
YL PE + DEK D+++ GVL E + G+ ++ +R S V + P
Sbjct: 169 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFV 228
Query: 363 TSNFKELV 370
T ++L+
Sbjct: 229 TEGARDLI 236
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 113
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GT 169
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
YL PE + DEK D+++ GVL E + G+
Sbjct: 170 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 140 ATDNFNSEN---LIGK-GGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIV 195
T + N E+ +IG+ G +VYK + E + EE + D++ E+ I+
Sbjct: 4 VTRDLNPEDFWEIIGELGDFGKVYKA--QNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 61
Query: 196 AHINHPNAAKLI-GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGL 254
A +HPN KL+ F EN ++++F G++ +++ L +I + + L
Sbjct: 62 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPL---TESQIQVVCKQTL 118
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGL-AKWLPDNWSHHIVFPIEGTFGYL 313
L KA NIL + D + +++DFG+ AK F GT ++
Sbjct: 119 DALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI--GTPYWM 176
Query: 314 SPEYFMHGI-----VDEKTDVFAFGVLLLEL 339
+PE M D K DV++ G+ L+E+
Sbjct: 177 APEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 55 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 110
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 111 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GT 166
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
YL PE + DEK D+++ GVL E + G+
Sbjct: 167 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 118
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I+DFG + P + + GT
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GT 174
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
YL PE DEK D+++ GVL E + G+
Sbjct: 175 LDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 25/210 (11%)
Query: 150 IGKGGHAEVYKGCLP----DGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAK 205
+G G EVY+G + D E+ DFL E I++ +NH N +
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 206 LIGFSTEN-GFHLVLQFLPHGSLSSLLF------GSTECLEWTIRYKIALGIAEGLQYLX 258
IG S ++ ++L+ + G L S L L +A IA G QYL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 259 XXXXXXXXXXXXKASNILLS---EDYEAQISDFGLAKWLPDNWSHH----IVFPIEGTFG 311
A N LL+ A+I DFG+A+ + + + P++
Sbjct: 159 ENHFIHRDIA---ARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK---- 211
Query: 312 YLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
++ PE FM GI KTD ++FGVLL E+ +
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 12/196 (6%)
Query: 150 IGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLI 207
IG+G +V++G P+ + FL E + +HP+ KLI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 208 GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXX 267
G TEN ++++ G L S L L+ A ++ L YL
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDI 137
Query: 268 XXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV---FPIEGTFGYLSPEYFMHGIVD 324
A N+L+S + ++ DFGL++++ D+ + PI+ +++PE
Sbjct: 138 A---ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFRRFT 190
Query: 325 EKTDVFAFGVLLLELI 340
+DV+ FGV + E++
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 6/196 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
E ++ E +++ ++HP KL F + + L + +G L + E
Sbjct: 73 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 132
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K NILL+ED QI+DFG AK L
Sbjct: 133 CTRFYTA-EIVSALEYLHGKGIIHRDL---KPENILLNEDMHIQITDFGTAKVLSPESKQ 188
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPL 360
GT Y+SPE + +D++A G ++ +L+ G + + L I+AK +
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGL-IFAKII 247
Query: 361 LQTSNFKELVDPRLAD 376
+F E P+ D
Sbjct: 248 KLEYDFPEKFFPKARD 263
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 49/261 (18%)
Query: 188 FLSELGIVAHI-NHPNAAKLIGFSTENGFHLVL-QFLPHGSLSSLLFGSTECLEWTIRYK 245
+SEL I++H+ H N L+G T G LV+ ++ +G L + L + LE +
Sbjct: 96 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFA 155
Query: 246 IALG-------------IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAK 292
IA +A+G+ +L A N+LL+ + A+I DFGLA+
Sbjct: 156 IANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVA---ARNVLLTNGHVAKIGDFGLAR 212
Query: 293 WLPDNWSHHIV-----FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVD 347
+ ++ S++IV P++ +++PE + ++DV+++G+LL E+
Sbjct: 213 DIMND-SNYIVKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIF------- 260
Query: 348 SRRQSLVIWAKP-LLQTSNFKELVDPRLADAYDLAE----MKRAMLTASVCIHHLSTMRP 402
SL + P +L S F +LV D Y +A+ K C T RP
Sbjct: 261 ----SLGLNPYPGILVNSKFYKLVK----DGYQMAQPAFAPKNIYSIMQACWALEPTHRP 312
Query: 403 QMTRVLQLLRGEGGQTDLKPK 423
++ L+ E Q D + +
Sbjct: 313 TFQQICSFLQ-EQAQEDRRER 332
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 12/196 (6%)
Query: 150 IGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLI 207
IG+G +V++G P+ + FL E + +HP+ KLI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 208 GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXX 267
G TEN ++++ G L S L L+ A ++ L YL
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDI 137
Query: 268 XXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV---FPIEGTFGYLSPEYFMHGIVD 324
A N+L+S + ++ DFGL++++ D+ + PI+ +++PE
Sbjct: 138 A---ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFRRFT 190
Query: 325 EKTDVFAFGVLLLELI 340
+DV+ FGV + E++
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 49/261 (18%)
Query: 188 FLSELGIVAHI-NHPNAAKLIGFSTENGFHLVL-QFLPHGSLSSLLFGSTECLEWTIRYK 245
+SEL I++H+ H N L+G T G LV+ ++ +G L + L + LE +
Sbjct: 96 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFA 155
Query: 246 IALG-------------IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAK 292
IA +A+G+ +L A N+LL+ + A+I DFGLA+
Sbjct: 156 IANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVA---ARNVLLTNGHVAKIGDFGLAR 212
Query: 293 WLPDNWSHHIV-----FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVD 347
+ ++ S++IV P++ +++PE + ++DV+++G+LL E+
Sbjct: 213 DIMND-SNYIVKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIF------- 260
Query: 348 SRRQSLVIWAKP-LLQTSNFKELVDPRLADAYDLAE----MKRAMLTASVCIHHLSTMRP 402
SL + P +L S F +LV D Y +A+ K C T RP
Sbjct: 261 ----SLGLNPYPGILVNSKFYKLVK----DGYQMAQPAFAPKNIYSIMQACWALEPTHRP 312
Query: 403 QMTRVLQLLRGEGGQTDLKPK 423
++ L+ E Q D + +
Sbjct: 313 TFQQICSFLQ-EQAQEDRRER 332
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 87/210 (41%), Gaps = 25/210 (11%)
Query: 150 IGKGGHAEVYKGCLP----DGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAK 205
+G G EVY+G + D E+ DFL E I++ NH N +
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 206 LIGFSTEN-GFHLVLQFLPHGSLSSLLF------GSTECLEWTIRYKIALGIAEGLQYLX 258
IG S ++ ++L+ + G L S L L +A IA G QYL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 259 XXXXXXXXXXXXKASNILLS---EDYEAQISDFGLAKWLPDNWSHH----IVFPIEGTFG 311
A N LL+ A+I DFG+A+ + + + P++
Sbjct: 185 ENHFIHRDIA---ARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK---- 237
Query: 312 YLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
++ PE FM GI KTD ++FGVLL E+ +
Sbjct: 238 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 12/196 (6%)
Query: 150 IGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLI 207
IG+G +V++G P+ + FL E + +HP+ KLI
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 208 GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXX 267
G TEN ++++ G L S L L+ A ++ L YL
Sbjct: 83 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDI 142
Query: 268 XXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV---FPIEGTFGYLSPEYFMHGIVD 324
A N+L+S + ++ DFGL++++ D+ + PI+ +++PE
Sbjct: 143 A---ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFRRFT 195
Query: 325 EKTDVFAFGVLLLELI 340
+DV+ FGV + E++
Sbjct: 196 SASDVWMFGVCMWEIL 211
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 12/196 (6%)
Query: 150 IGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLI 207
IG+G +V++G P+ + FL E + +HP+ KLI
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 208 GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXX 267
G TEN ++++ G L S L L+ A ++ L YL
Sbjct: 80 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDI 139
Query: 268 XXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV---FPIEGTFGYLSPEYFMHGIVD 324
A N+L+S + ++ DFGL++++ D+ + PI+ +++PE
Sbjct: 140 A---ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFRRFT 192
Query: 325 EKTDVFAFGVLLLELI 340
+DV+ FGV + E++
Sbjct: 193 SASDVWMFGVCMWEIL 208
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 12/196 (6%)
Query: 150 IGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLI 207
IG+G +V++G P+ + FL E + +HP+ KLI
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 208 GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXX 267
G TEN ++++ G L S L L+ A ++ L YL
Sbjct: 106 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDI 165
Query: 268 XXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV---FPIEGTFGYLSPEYFMHGIVD 324
A N+L+S + ++ DFGL++++ D+ + PI+ +++PE
Sbjct: 166 A---ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFRRFT 218
Query: 325 EKTDVFAFGVLLLELI 340
+DV+ FGV + E++
Sbjct: 219 SASDVWMFGVCMWEIL 234
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 6/196 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
E ++ E +++ ++HP KL F + + L + +G L + E
Sbjct: 73 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 132
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K NILL+ED QI+DFG AK L
Sbjct: 133 CTRFYTA-EIVSALEYLHGKGIIHRDL---KPENILLNEDMHIQITDFGTAKVLSPESKQ 188
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPL 360
GT Y+SPE + +D++A G ++ +L+ G + + L I+AK +
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL-IFAKII 247
Query: 361 LQTSNFKELVDPRLAD 376
+F E P+ D
Sbjct: 248 KLEYDFPEKFFPKARD 263
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 12/196 (6%)
Query: 150 IGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLI 207
IG+G +V++G P+ + FL E + +HP+ KLI
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 208 GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXX 267
G TEN ++++ G L S L L+ A ++ L YL
Sbjct: 81 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDI 140
Query: 268 XXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV---FPIEGTFGYLSPEYFMHGIVD 324
A N+L+S + ++ DFGL++++ D+ + PI+ +++PE
Sbjct: 141 A---ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFRRFT 193
Query: 325 EKTDVFAFGVLLLELI 340
+DV+ FGV + E++
Sbjct: 194 SASDVWMFGVCMWEIL 209
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 103/266 (38%), Gaps = 24/266 (9%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
IG G VYKG E+ F +E+ ++ H N +G+
Sbjct: 44 IGSGSFGTVYKG---KWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 210 STENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXX 269
T++ +V Q+ SL L + IA A+G+ YL
Sbjct: 101 MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDM-- 158
Query: 270 XKASNILLSEDYEAQISDFGLAKWLPDNWS-HHIVFPIEGTFGYLSPEYFM---HGIVDE 325
K++NI L E +I DFGLA + WS V G+ +++PE +
Sbjct: 159 -KSNNIFLHEGLTVKIGDFGLAT-VKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF 216
Query: 326 KTDVFAFGVLLLELITGR---RAVDSRRQSLVIWAKPLLQTSNFKELVDPRLADAYDLAE 382
++DV+++G++L EL+TG +++R Q + + + P L+ Y
Sbjct: 217 QSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRG---------YASPDLSKLYKNCP 267
Query: 383 MKRAMLTASVCIHHLSTMRPQMTRVL 408
L A C+ + RP ++L
Sbjct: 268 KAMKRLVAD-CVKKVKEERPLFPQIL 292
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 87/210 (41%), Gaps = 25/210 (11%)
Query: 150 IGKGGHAEVYKGCLP----DGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAK 205
+G G EVY+G + D E+ DFL E I++ NH N +
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 206 LIGFSTEN-GFHLVLQFLPHGSLSSLLF------GSTECLEWTIRYKIALGIAEGLQYLX 258
IG S ++ ++L+ + G L S L L +A IA G QYL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 259 XXXXXXXXXXXXKASNILLS---EDYEAQISDFGLAKWLPDNWSHH----IVFPIEGTFG 311
A N LL+ A+I DFG+A+ + + + P++
Sbjct: 165 ENHFIHRDIA---ARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK---- 217
Query: 312 YLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
++ PE FM GI KTD ++FGVLL E+ +
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 12/196 (6%)
Query: 150 IGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLI 207
IG+G +V++G P+ + FL E + +HP+ KLI
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 208 GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXX 267
G TEN ++++ G L S L L+ A ++ L YL
Sbjct: 75 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDI 134
Query: 268 XXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV---FPIEGTFGYLSPEYFMHGIVD 324
A N+L+S + ++ DFGL++++ D+ + PI+ +++PE
Sbjct: 135 A---ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFRRFT 187
Query: 325 EKTDVFAFGVLLLELI 340
+DV+ FGV + E++
Sbjct: 188 SASDVWMFGVCMWEIL 203
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 115
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I++FG + P + + GT
Sbjct: 116 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC----GT 171
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
YL PE + DEK D+++ GVL E + G+
Sbjct: 172 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 88/210 (41%), Gaps = 25/210 (11%)
Query: 150 IGKGGHAEVYKGCLP----DGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAK 205
+G G EVY+G + D E+ DFL E I++ +NH N +
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 206 LIGFSTEN-GFHLVLQFLPHGSLSSLLF------GSTECLEWTIRYKIALGIAEGLQYLX 258
IG S ++ ++L+ + G L S L L +A IA G QYL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 259 XXXXXXXXXXXXKASNILLS---EDYEAQISDFGLAKWLPDNWSHH----IVFPIEGTFG 311
A N LL+ A+I DFG+A+ + + + P++
Sbjct: 173 ENHFIHRDI---AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK---- 225
Query: 312 YLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
++ PE FM GI KTD ++FGVLL E+ +
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 87/210 (41%), Gaps = 25/210 (11%)
Query: 150 IGKGGHAEVYKGCLP----DGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAK 205
+G G EVY+G + D E+ DFL E I++ NH N +
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 206 LIGFSTEN-GFHLVLQFLPHGSLSSLLF------GSTECLEWTIRYKIALGIAEGLQYLX 258
IG S ++ ++L+ + G L S L L +A IA G QYL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 259 XXXXXXXXXXXXKASNILLS---EDYEAQISDFGLAKWLPDNWSHH----IVFPIEGTFG 311
A N LL+ A+I DFG+A+ + + + P++
Sbjct: 176 ENHFIHRDIA---ARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK---- 228
Query: 312 YLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
++ PE FM GI KTD ++FGVLL E+ +
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 84/209 (40%), Gaps = 7/209 (3%)
Query: 142 DNFNSENLIGKGGHAEVYKG-CLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINH 200
++F NL+GKG A VY+ + G + +E+ I + H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 201 PNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXX 259
P+ +L F N +LVL+ +G ++ L + I G+ YL
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS 130
Query: 260 XXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFM 319
SN+LL+ + +I+DFGLA L H + + GT Y+SPE
Sbjct: 131 HGILHRDLTL---SNLLLTRNMNIKIADFGLATQL--KMPHEKHYTLCGTPNYISPEIAT 185
Query: 320 HGIVDEKTDVFAFGVLLLELITGRRAVDS 348
++DV++ G + L+ GR D+
Sbjct: 186 RSAHGLESDVWSLGCMFYTLLIGRPPFDT 214
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 87/210 (41%), Gaps = 25/210 (11%)
Query: 150 IGKGGHAEVYKGCLP----DGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAK 205
+G G EVY+G + D E+ DFL E I++ NH N +
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 206 LIGFSTEN-GFHLVLQFLPHGSLSSLLF------GSTECLEWTIRYKIALGIAEGLQYLX 258
IG S ++ ++L+ + G L S L L +A IA G QYL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 259 XXXXXXXXXXXXKASNILLS---EDYEAQISDFGLAKWLPDNWSHH----IVFPIEGTFG 311
A N LL+ A+I DFG+A+ + + + P++
Sbjct: 159 ENHFIHRDIA---ARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK---- 211
Query: 312 YLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
++ PE FM GI KTD ++FGVLL E+ +
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 87/210 (41%), Gaps = 25/210 (11%)
Query: 150 IGKGGHAEVYKGCLP----DGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAK 205
+G G EVY+G + D E+ DFL E I++ NH N +
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 206 LIGFSTEN-GFHLVLQFLPHGSLSSLLF------GSTECLEWTIRYKIALGIAEGLQYLX 258
IG S ++ ++L+ + G L S L L +A IA G QYL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 259 XXXXXXXXXXXXKASNILLS---EDYEAQISDFGLAKWLPDNWSHH----IVFPIEGTFG 311
A N LL+ A+I DFG+A+ + + + P++
Sbjct: 199 ENHFIHRDIA---ARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK---- 251
Query: 312 YLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
++ PE FM GI KTD ++FGVLL E+ +
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 87/210 (41%), Gaps = 25/210 (11%)
Query: 150 IGKGGHAEVYKGCLP----DGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAK 205
+G G EVY+G + D E+ DFL E I++ NH N +
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 206 LIGFSTEN-GFHLVLQFLPHGSLSSLLF------GSTECLEWTIRYKIALGIAEGLQYLX 258
IG S ++ ++L+ + G L S L L +A IA G QYL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 259 XXXXXXXXXXXXKASNILLS---EDYEAQISDFGLAKWLPDNWSHH----IVFPIEGTFG 311
A N LL+ A+I DFG+A+ + + + P++
Sbjct: 175 ENHFIHRDIA---ARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK---- 227
Query: 312 YLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
++ PE FM GI KTD ++FGVLL E+ +
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 87/210 (41%), Gaps = 25/210 (11%)
Query: 150 IGKGGHAEVYKGCLP----DGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAK 205
+G G EVY+G + D E+ DFL E I++ NH N +
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 206 LIGFSTEN-GFHLVLQFLPHGSLSSLLF------GSTECLEWTIRYKIALGIAEGLQYLX 258
IG S ++ ++L+ + G L S L L +A IA G QYL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 259 XXXXXXXXXXXXKASNILLS---EDYEAQISDFGLAKWLPDNWSHH----IVFPIEGTFG 311
A N LL+ A+I DFG+A+ + + + P++
Sbjct: 158 ENHFIHRDI---AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK---- 210
Query: 312 YLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
++ PE FM GI KTD ++FGVLL E+ +
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 19/171 (11%)
Query: 185 ISDFLSELGIVAHINHPNAAKLIGFSTENGFH-------LVLQFLPHGSLSSLLFGS--- 234
I +FL E + +HP+ AKL+G S + ++L F+ HG L + L S
Sbjct: 69 IEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIG 128
Query: 235 ----TECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGL 290
L+ +R+ + IA G++YL A N +L+ED ++DFGL
Sbjct: 129 ENPFNLPLQTLVRFMV--DIACGMEYLSSRNFIHRDLA---ARNCMLAEDMTVCVADFGL 183
Query: 291 AKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
++ + + + +L+ E + +DV+AFGV + E++T
Sbjct: 184 SRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 93/219 (42%), Gaps = 17/219 (7%)
Query: 133 DFAELAAATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSEL 192
D E D ++GKG + VY G D D E+
Sbjct: 13 DLLEYDYEYDENGDRVVLGKGTYGIVYAG--RDLSNQVRIAIKEIPERDSRYSQPLHEEI 70
Query: 193 GIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLL---FGSTECLEWTIRYKIAL 248
+ H+ H N + +G +ENGF + ++ +P GSLS+LL +G + E TI +
Sbjct: 71 ALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ 130
Query: 249 GIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEA--QISDFGLAKWLPDNWSHHIVFPI 306
I EGL+YL K N+L++ Y +ISDFG +K L F
Sbjct: 131 -ILEGLKYL---HDNQIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETF-- 183
Query: 307 EGTFGYLSPEYFMHGI--VDEKTDVFAFGVLLLELITGR 343
GT Y++PE G + D+++ G ++E+ TG+
Sbjct: 184 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 87/210 (41%), Gaps = 25/210 (11%)
Query: 150 IGKGGHAEVYKGCLP----DGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAK 205
+G G EVY+G + D E+ DFL E I++ NH N +
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 206 LIGFSTEN-GFHLVLQFLPHGSLSSLLF------GSTECLEWTIRYKIALGIAEGLQYLX 258
IG S ++ ++L+ + G L S L L +A IA G QYL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 259 XXXXXXXXXXXXKASNILLS---EDYEAQISDFGLAKWLPDNWSHH----IVFPIEGTFG 311
A N LL+ A+I DFG+A+ + + + P++
Sbjct: 150 ENHFIHRDI---AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK---- 202
Query: 312 YLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
++ PE FM GI KTD ++FGVLL E+ +
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 87/210 (41%), Gaps = 25/210 (11%)
Query: 150 IGKGGHAEVYKGCLP----DGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAK 205
+G G EVY+G + D E+ DFL E I++ NH N +
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 206 LIGFSTEN-GFHLVLQFLPHGSLSSLLF------GSTECLEWTIRYKIALGIAEGLQYLX 258
IG S ++ ++L+ + G L S L L +A IA G QYL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 259 XXXXXXXXXXXXKASNILLS---EDYEAQISDFGLAKWLPDNWSHH----IVFPIEGTFG 311
A N LL+ A+I DFG+A+ + + + P++
Sbjct: 159 ENHFIHRDIA---ARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK---- 211
Query: 312 YLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
++ PE FM GI KTD ++FGVLL E+ +
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 87/210 (41%), Gaps = 25/210 (11%)
Query: 150 IGKGGHAEVYKGCLP----DGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAK 205
+G G EVY+G + D E+ DFL E I++ NH N +
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 206 LIGFSTEN-GFHLVLQFLPHGSLSSLLF------GSTECLEWTIRYKIALGIAEGLQYLX 258
IG S ++ ++L+ + G L S L L +A IA G QYL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 259 XXXXXXXXXXXXKASNILLS---EDYEAQISDFGLAKWLPDNWSHH----IVFPIEGTFG 311
A N LL+ A+I DFG+A+ + + + P++
Sbjct: 173 ENHFIHRDI---AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK---- 225
Query: 312 YLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
++ PE FM GI KTD ++FGVLL E+ +
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 9/200 (4%)
Query: 144 FNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNA 203
F + IGKG EVYKG + + E E+ I D E+ +++ + P
Sbjct: 21 FTKLDRIGKGSFGEVYKG-IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYI 79
Query: 204 AKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXX 262
+ G + +++++L GS LL LE T I I +GL YL
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGSALDLL--KPGPLEETYIATILREILKGLDYLHSERK 137
Query: 263 XXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGI 322
KA+N+LLSE + +++DFG+A L D F GT +++PE
Sbjct: 138 IHRDI---KAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXF--VGTPFWMAPEVIKQSA 192
Query: 323 VDEKTDVFAFGVLLLELITG 342
D K D+++ G+ +EL G
Sbjct: 193 YDFKADIWSLGITAIELAKG 212
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 12/196 (6%)
Query: 150 IGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLI 207
IG+G +V++G P+ + FL E + +HP+ KLI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 208 GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXX 267
G TEN ++++ G L S L L+ A ++ L YL
Sbjct: 458 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDI 517
Query: 268 XXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV---FPIEGTFGYLSPEYFMHGIVD 324
A N+L+S + ++ DFGL++++ D+ + PI+ +++PE
Sbjct: 518 A---ARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFRRFT 570
Query: 325 EKTDVFAFGVLLLELI 340
+DV+ FGV + E++
Sbjct: 571 SASDVWMFGVCMWEIL 586
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I +H+ HPN +L G F +L+L++ P G++ + + L + A
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATY 116
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I E L K N+LL E +I++FG + P + + GT
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC----GT 172
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
YL PE + DEK D+++ GVL E + G+
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 8/162 (4%)
Query: 186 SDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRY 244
+ + EL ++ N P G F ++ + ++ + GSL +L + E I
Sbjct: 111 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILG 169
Query: 245 KIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVF 304
K+++ + +GL YL K SNIL++ E ++ DFG++ L D+ ++ V
Sbjct: 170 KVSIAVIKGLTYLREKHKIMHRDV--KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV- 226
Query: 305 PIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAV 346
GT Y+SPE ++D+++ G+ L+E+ GR +
Sbjct: 227 ---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 86/210 (40%), Gaps = 25/210 (11%)
Query: 150 IGKGGHAEVYKGCLP----DGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAK 205
+G G EVY+G + D E+ DFL E I++ NH N +
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 206 LIGFSTENGFHLVL-QFLPHGSLSSLLF------GSTECLEWTIRYKIALGIAEGLQYLX 258
IG S ++ +L + + G L S L L +A IA G QYL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 259 XXXXXXXXXXXXKASNILLS---EDYEAQISDFGLAKWLPDNWSHH----IVFPIEGTFG 311
A N LL+ A+I DFG+A+ + + + P++
Sbjct: 158 ENHFIHRDI---AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK---- 210
Query: 312 YLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
++ PE FM GI KTD ++FGVLL E+ +
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 90/226 (39%), Gaps = 25/226 (11%)
Query: 128 SWKNFDFAELAAATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISD 187
WKN + + ++F+ +IG+GG EVY GC D++RI
Sbjct: 175 QWKNVEL-NIHLTMNDFSVHRIIGRGGFGEVY-GC----RKADTGKMYAMKCLDKKRIKM 228
Query: 188 FLSE---------LGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTEC 237
E L +V+ + P + F T + +L + G L L
Sbjct: 229 KQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF 288
Query: 238 LEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN 297
E +R+ A I GL+++ K +NILL E +ISD GLA
Sbjct: 289 SEADMRF-YAAEIILGLEHMHNRFVVYRDL---KPANILLDEHGHVRISDLGLACDFSKK 344
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIV-DEKTDVFAFGVLLLELITG 342
H V GT GY++PE G+ D D F+ G +L +L+ G
Sbjct: 345 KPHASV----GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 8/162 (4%)
Query: 186 SDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRY 244
+ + EL ++ N P G F ++ + ++ + GSL +L + E I
Sbjct: 76 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILG 134
Query: 245 KIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVF 304
K+++ + +GL YL K SNIL++ E ++ DFG++ L D+ ++ V
Sbjct: 135 KVSIAVIKGLTYLREKHKIMHRDV--KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV- 191
Query: 305 PIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAV 346
GT Y+SPE ++D+++ G+ L+E+ GR +
Sbjct: 192 ---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 90/226 (39%), Gaps = 25/226 (11%)
Query: 128 SWKNFDFAELAAATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISD 187
WKN + + ++F+ +IG+GG EVY GC D++RI
Sbjct: 176 QWKNVEL-NIHLTMNDFSVHRIIGRGGFGEVY-GC----RKADTGKMYAMKCLDKKRIKM 229
Query: 188 FLSE---------LGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTEC 237
E L +V+ + P + F T + +L + G L L
Sbjct: 230 KQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF 289
Query: 238 LEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN 297
E +R+ A I GL+++ K +NILL E +ISD GLA
Sbjct: 290 SEADMRF-YAAEIILGLEHMHNRFVVYRDL---KPANILLDEHGHVRISDLGLACDFSKK 345
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIV-DEKTDVFAFGVLLLELITG 342
H V GT GY++PE G+ D D F+ G +L +L+ G
Sbjct: 346 KPHASV----GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 90/226 (39%), Gaps = 25/226 (11%)
Query: 128 SWKNFDFAELAAATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISD 187
WKN + + ++F+ +IG+GG EVY GC D++RI
Sbjct: 176 QWKNVEL-NIHLTMNDFSVHRIIGRGGFGEVY-GC----RKADTGKMYAMKCLDKKRIKM 229
Query: 188 FLSE---------LGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTEC 237
E L +V+ + P + F T + +L + G L L
Sbjct: 230 KQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF 289
Query: 238 LEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN 297
E +R+ A I GL+++ K +NILL E +ISD GLA
Sbjct: 290 SEADMRF-YAAEIILGLEHMHNRFVVYRDL---KPANILLDEHGHVRISDLGLACDFSKK 345
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIV-DEKTDVFAFGVLLLELITG 342
H V GT GY++PE G+ D D F+ G +L +L+ G
Sbjct: 346 KPHASV----GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 90/226 (39%), Gaps = 25/226 (11%)
Query: 128 SWKNFDFAELAAATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISD 187
WKN + + ++F+ +IG+GG EVY GC D++RI
Sbjct: 176 QWKNVEL-NIHLTMNDFSVHRIIGRGGFGEVY-GC----RKADTGKMYAMKCLDKKRIKM 229
Query: 188 FLSE---------LGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTEC 237
E L +V+ + P + F T + +L + G L L
Sbjct: 230 KQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF 289
Query: 238 LEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN 297
E +R+ A I GL+++ K +NILL E +ISD GLA
Sbjct: 290 SEADMRF-YAAEIILGLEHMHNRFVVYRDL---KPANILLDEHGHVRISDLGLACDFSKK 345
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIV-DEKTDVFAFGVLLLELITG 342
H V GT GY++PE G+ D D F+ G +L +L+ G
Sbjct: 346 KPHASV----GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 88/210 (41%), Gaps = 22/210 (10%)
Query: 144 FNSENL-----IGKGGHAEVYKGCL-PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAH 197
N E+L IG+G EV+ G L D D + + FL E I+
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLK--AKFLQEARILKQ 168
Query: 198 INHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQY 256
+HPN +LIG T+ ++V++ + G + L L ++ A G++Y
Sbjct: 169 YSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEY 228
Query: 257 LXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTF-----G 311
L A N L++E +ISDFG+++ D V+ G
Sbjct: 229 LESKCCIHRDLA---ARNCLVTEKNVLKISDFGMSREEADG-----VYAASGGLRQVPVK 280
Query: 312 YLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ +PE +G ++DV++FG+LL E +
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 94/230 (40%), Gaps = 44/230 (19%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGI--VAHIN 199
DN LIG+G + VYKG L + +F++E I V +
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANR-------QNFINEKNIYRVPLME 65
Query: 200 HPNAAKLI---GFSTENG---FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEG 253
H N A+ I T +G + LV+++ P+GSL L S +W ++A + G
Sbjct: 66 HDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL--SLHTSDWVSSCRLAHSVTRG 123
Query: 254 LQYLXXX------XXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE 307
L YL + N+L+ D ISDFGL+ L N +V P E
Sbjct: 124 LAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGN---RLVRPGE 180
Query: 308 ---------GTFGYLSPEYFMHGIVD--------EKTDVFAFGVLLLELI 340
GT Y++PE + G V+ ++ D++A G++ E+
Sbjct: 181 EDNAAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 81/196 (41%), Gaps = 12/196 (6%)
Query: 150 IGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLI 207
IG+G +V++G P+ + FL E + +HP+ KLI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 208 GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXX 267
G TEN ++++ G L S L L+ A ++ L YL
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDI 137
Query: 268 XXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV---FPIEGTFGYLSPEYFMHGIVD 324
A N+L+S + ++ DFGL++++ D+ PI+ +++PE
Sbjct: 138 A---ARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK----WMAPESINFRRFT 190
Query: 325 EKTDVFAFGVLLLELI 340
+DV+ FGV + E++
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 9/200 (4%)
Query: 144 FNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNA 203
F IGKG EV+KG + + E E+ I D E+ +++ + P
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 204 AKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXX 262
K G + + +++++L GS LL L+ T I I +GL YL
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 263 XXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGI 322
KA+N+LLSE E +++DFG+A L D F GT +++PE
Sbjct: 126 IHRDI---KAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF--VGTPFWMAPEVIKQSA 180
Query: 323 VDEKTDVFAFGVLLLELITG 342
D K D+++ G+ +EL G
Sbjct: 181 YDSKADIWSLGITAIELARG 200
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 86/210 (40%), Gaps = 25/210 (11%)
Query: 150 IGKGGHAEVYKGCLP----DGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAK 205
+G G EVY+G + D E+ DFL E I++ NH N +
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 206 LIGFSTENGFHLVL-QFLPHGSLSSLLF------GSTECLEWTIRYKIALGIAEGLQYLX 258
IG S ++ +L + + G L S L L +A IA G QYL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 259 XXXXXXXXXXXXKASNILLS---EDYEAQISDFGLAKWLPDNWSHH----IVFPIEGTFG 311
A N LL+ A+I DFG+A+ + + + P++
Sbjct: 173 ENHFIHRDI---AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK---- 225
Query: 312 YLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
++ PE FM GI KTD ++FGVLL E+ +
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 6/196 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
E ++ E +++ ++HP KL F + + L + +G L + E
Sbjct: 73 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDET 132
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K NILL+ED QI+DFG AK L
Sbjct: 133 CTRFYTA-EIVSALEYLHGKGIIHRDL---KPENILLNEDMHIQITDFGTAKVLSPESKQ 188
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPL 360
GT Y+SPE + +D++A G ++ +L+ G + + L I+ K +
Sbjct: 189 ARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKII 247
Query: 361 LQTSNFKELVDPRLAD 376
+F E P+ D
Sbjct: 248 KLEYDFPEKFFPKARD 263
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 9/200 (4%)
Query: 144 FNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNA 203
F IGKG EV+KG + + E E+ I D E+ +++ + P
Sbjct: 24 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 82
Query: 204 AKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXX 262
K G + + +++++L GS LL L+ T I I +GL YL
Sbjct: 83 TKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSEKK 140
Query: 263 XXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGI 322
KA+N+LLSE E +++DFG+A L D F GT +++PE
Sbjct: 141 IHRDI---KAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXF--VGTPFWMAPEVIKQSA 195
Query: 323 VDEKTDVFAFGVLLLELITG 342
D K D+++ G+ +EL G
Sbjct: 196 YDSKADIWSLGITAIELARG 215
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 15/211 (7%)
Query: 138 AAATDNFNSENLIGKGGHAEVY--KGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIV 195
A +D + + ++GKG EV K + E + ++ S L E+ ++
Sbjct: 22 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES-LLREVQLL 80
Query: 196 AHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGL 254
++HPN KL F + G F+LV + G L + E +I + G+
Sbjct: 81 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-RIIRQVLSGI 139
Query: 255 QYLXXXXXXXXXXXXXKASNILL---SEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFG 311
Y+ K N+LL S+D +I DFGL+ S + I GT
Sbjct: 140 TYMHKNKIVHRDL---KPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKI-GTAY 193
Query: 312 YLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
Y++PE +HG DEK DV++ GV+L L++G
Sbjct: 194 YIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 8/162 (4%)
Query: 186 SDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRY 244
+ + EL ++ N P G F ++ + ++ + GSL +L + E I
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILG 107
Query: 245 KIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVF 304
K+++ + +GL YL K SNIL++ E ++ DFG++ L D+ ++ V
Sbjct: 108 KVSIAVIKGLTYLREKHKIMHRDV--KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV- 164
Query: 305 PIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAV 346
GT Y+SPE ++D+++ G+ L+E+ GR +
Sbjct: 165 ---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 15/211 (7%)
Query: 138 AAATDNFNSENLIGKGGHAEVY--KGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIV 195
A +D + + ++GKG EV K + E + ++ S L E+ ++
Sbjct: 28 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES-LLREVQLL 86
Query: 196 AHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGL 254
++HPN KL F + G F+LV + G L + E +I + G+
Sbjct: 87 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-RIIRQVLSGI 145
Query: 255 QYLXXXXXXXXXXXXXKASNILL---SEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFG 311
Y+ K N+LL S+D +I DFGL+ S + I GT
Sbjct: 146 TYMHKNKIVHRDL---KPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKI-GTAY 199
Query: 312 YLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
Y++PE +HG DEK DV++ GV+L L++G
Sbjct: 200 YIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 21/200 (10%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
+G G +VYK + E + EE + D++ E+ I+A +HP KL+G
Sbjct: 27 LGDGAFGKVYKA--KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA 84
Query: 210 STENG-FHLVLQFLPHGSLSSLLF----GSTECLEWTIRYKIALGIAEGLQYLXXXXXXX 264
+G ++++F P G++ +++ G TE +I + + L+ L
Sbjct: 85 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEP-------QIQVVCRQMLEALNFLHSKR 137
Query: 265 XXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIV- 323
KA N+L++ + + +++DFG++ F GT +++PE M +
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI--GTPYWMAPEVVMCETMK 195
Query: 324 ----DEKTDVFAFGVLLLEL 339
D K D+++ G+ L+E+
Sbjct: 196 DTPYDYKADIWSLGITLIEM 215
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 81/196 (41%), Gaps = 12/196 (6%)
Query: 150 IGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLI 207
IG+G +V++G P+ + FL E + +HP+ KLI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 208 GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXX 267
G TEN ++++ G L S L L+ A ++ L YL
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDI 137
Query: 268 XXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV---FPIEGTFGYLSPEYFMHGIVD 324
A N+L+S ++ DFGL++++ D+ + PI+ +++PE
Sbjct: 138 A---ARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFRRFT 190
Query: 325 EKTDVFAFGVLLLELI 340
+DV+ FGV + E++
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 9/200 (4%)
Query: 144 FNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNA 203
F IGKG EV+KG + + E E+ I D E+ +++ + P
Sbjct: 9 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 204 AKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXX 262
K G + + +++++L GS LL L+ T I I +GL YL
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 263 XXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGI 322
KA+N+LLSE E +++DFG+A L D F GT +++PE
Sbjct: 126 IHRDI---KAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXF--VGTPFWMAPEVIKQSA 180
Query: 323 VDEKTDVFAFGVLLLELITG 342
D K D+++ G+ +EL G
Sbjct: 181 YDSKADIWSLGITAIELARG 200
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 21/200 (10%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
+G G +VYK + E + EE + D++ E+ I+A +HP KL+G
Sbjct: 19 LGDGAFGKVYKA--KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA 76
Query: 210 STENG-FHLVLQFLPHGSLSSLLF----GSTECLEWTIRYKIALGIAEGLQYLXXXXXXX 264
+G ++++F P G++ +++ G TE +I + + L+ L
Sbjct: 77 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEP-------QIQVVCRQMLEALNFLHSKR 129
Query: 265 XXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIV- 323
KA N+L++ + + +++DFG++ F GT +++PE M +
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI--GTPYWMAPEVVMCETMK 187
Query: 324 ----DEKTDVFAFGVLLLEL 339
D K D+++ G+ L+E+
Sbjct: 188 DTPYDYKADIWSLGITLIEM 207
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 84/179 (46%), Gaps = 10/179 (5%)
Query: 186 SDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRY 244
+ + EL ++ N P G F ++ + ++ + GSL +L + E I
Sbjct: 59 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPE-EILG 117
Query: 245 KIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVF 304
K+++ + GL YL K SNIL++ E ++ DFG++ L D+ ++ V
Sbjct: 118 KVSIAVLRGLAYLREKHQIMHRDV--KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV- 174
Query: 305 PIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAV--DSRRQSLVIWAKPLL 361
GT Y++PE ++D+++ G+ L+EL GR + ++ I+ +P++
Sbjct: 175 ---GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVV 230
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 12/167 (7%)
Query: 180 EDEERISDFLSELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECL 238
E EE + F E+ + ++H N +I E+ ++LV++++ +LS + S L
Sbjct: 50 EKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI-ESHGPL 108
Query: 239 EWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN- 297
I +G+++ K NIL+ + +I DFG+AK L +
Sbjct: 109 SVDTAINFTNQILDGIKH---AHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165
Query: 298 --WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
++H++ GT Y SPE DE TD+++ G++L E++ G
Sbjct: 166 LTQTNHVL----GTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVG 208
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 30/182 (16%)
Query: 182 EERISDFLSELGIVAHI-NHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLL-------- 231
EE +SD +SE+ ++ I H N L+G T++G ++++++ G+L L
Sbjct: 81 EEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 232 ---FGSTECLEWTIRYK----IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQ 284
+ E + +K +A G++YL A N+L++E+ +
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA---ARNVLVTENNVMK 197
Query: 285 ISDFGLAKWLPDNWSHHIVFPIEGTFG-----YLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
I+DFGLA+ + ++I + + T G +++PE + ++DV++FGVL+ E+
Sbjct: 198 IADFGLARDI-----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
Query: 340 IT 341
T
Sbjct: 253 FT 254
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 8/162 (4%)
Query: 186 SDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRY 244
+ + EL ++ N P G F ++ + ++ + GSL +L + E I
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILG 107
Query: 245 KIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVF 304
K+++ + +GL YL K SNIL++ E ++ DFG++ L D+ ++ V
Sbjct: 108 KVSIAVIKGLTYLREKHKIMHRDV--KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV- 164
Query: 305 PIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAV 346
GT Y+SPE ++D+++ G+ L+E+ GR +
Sbjct: 165 ---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 15/211 (7%)
Query: 138 AAATDNFNSENLIGKGGHAEVY--KGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIV 195
A +D + + ++GKG EV K + E + ++ S L E+ ++
Sbjct: 45 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES-LLREVQLL 103
Query: 196 AHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGL 254
++HPN KL F + G F+LV + G L + E +I + G+
Sbjct: 104 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-RIIRQVLSGI 162
Query: 255 QYLXXXXXXXXXXXXXKASNILL---SEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFG 311
Y+ K N+LL S+D +I DFGL+ S + I GT
Sbjct: 163 TYMHKNKIVHRDL---KPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKI-GTAY 216
Query: 312 YLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
Y++PE +HG DEK DV++ GV+L L++G
Sbjct: 217 YIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 8/162 (4%)
Query: 186 SDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRY 244
+ + EL ++ N P G F ++ + ++ + GSL +L + E I
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILG 107
Query: 245 KIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVF 304
K+++ + +GL YL K SNIL++ E ++ DFG++ L D+ ++ V
Sbjct: 108 KVSIAVIKGLTYLREKHKIMHRDV--KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV- 164
Query: 305 PIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAV 346
GT Y+SPE ++D+++ G+ L+E+ GR +
Sbjct: 165 ---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 8/162 (4%)
Query: 186 SDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRY 244
+ + EL ++ N P G F ++ + ++ + GSL +L + E I
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILG 107
Query: 245 KIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVF 304
K+++ + +GL YL K SNIL++ E ++ DFG++ L D+ ++ V
Sbjct: 108 KVSIAVIKGLTYLREKHKIMHRDV--KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV- 164
Query: 305 PIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAV 346
GT Y+SPE ++D+++ G+ L+E+ GR +
Sbjct: 165 ---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 15/211 (7%)
Query: 138 AAATDNFNSENLIGKGGHAEVY--KGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIV 195
A +D + + ++GKG EV K + E + ++ S L E+ ++
Sbjct: 46 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES-LLREVQLL 104
Query: 196 AHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGL 254
++HPN KL F + G F+LV + G L + E +I + G+
Sbjct: 105 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-RIIRQVLSGI 163
Query: 255 QYLXXXXXXXXXXXXXKASNILL---SEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFG 311
Y+ K N+LL S+D +I DFGL+ S + I GT
Sbjct: 164 TYMHKNKIVHRDL---KPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKI-GTAY 217
Query: 312 YLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
Y++PE +HG DEK DV++ GV+L L++G
Sbjct: 218 YIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 8/162 (4%)
Query: 186 SDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRY 244
+ + EL ++ N P G F ++ + ++ + GSL +L + E I
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILG 107
Query: 245 KIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVF 304
K+++ + +GL YL K SNIL++ E ++ DFG++ L D+ ++ V
Sbjct: 108 KVSIAVIKGLTYLREKHKIMHRDV--KPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV- 164
Query: 305 PIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAV 346
GT Y+SPE ++D+++ G+ L+E+ GR +
Sbjct: 165 ---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 194 IVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAE 252
+++ + HP ++ G F +++ ++ G L SLL S ++ A +
Sbjct: 59 MLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCL 117
Query: 253 GLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGY 312
L+YL K NILL ++ +I+DFG AK++PD + + + GT Y
Sbjct: 118 ALEYLHSKDIIYRDL---KPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGTPDY 169
Query: 313 LSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
++PE ++ D ++FG+L+ E++ G
Sbjct: 170 IAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 9/160 (5%)
Query: 186 SDFLSELGIVAHINHPNAAKLIGFSTENG---FHLVLQFLPHGSLSSLLFGSTECLEWTI 242
S + E+ I+ + H + K G + G LV++++P GSL L C+
Sbjct: 55 SGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQ 112
Query: 243 RYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI 302
A I EG+ YL A N+LL D +I DFGLAK +P+ ++
Sbjct: 113 LLLFAQQICEGMAYLHAQHYIHRALA---ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 169
Query: 303 VFPI-EGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
V + + +PE +DV++FGV L EL+T
Sbjct: 170 VREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 9/160 (5%)
Query: 186 SDFLSELGIVAHINHPNAAKLIGFSTENG---FHLVLQFLPHGSLSSLLFGSTECLEWTI 242
S + E+ I+ + H + K G + G LV++++P GSL L C+
Sbjct: 56 SGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL--PRHCVGLAQ 113
Query: 243 RYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI 302
A I EG+ YL A N+LL D +I DFGLAK +P+ ++
Sbjct: 114 LLLFAQQICEGMAYLHAQHYIHRALA---ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 170
Query: 303 VFPI-EGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
V + + +PE +DV++FGV L EL+T
Sbjct: 171 VREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 113/257 (43%), Gaps = 45/257 (17%)
Query: 188 FLSELGIVAHI-NHPNAAKLIGFSTENGFHLVL-QFLPHGSLSSLLFGSTEC-------- 237
+SEL I++H+ H N L+G T G LV+ ++ +G L + L E
Sbjct: 96 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR 155
Query: 238 -LEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPD 296
LE + +A+G+ +L A N+LL+ + A+I DFGLA+ + +
Sbjct: 156 PLELRDLLHFSSQVAQGMAFLASKNCIHRDVA---ARNVLLTNGHVAKIGDFGLARDIMN 212
Query: 297 NWSHHIV-----FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQ 351
+ S++IV P++ +++PE + ++DV+++G+LL E+
Sbjct: 213 D-SNYIVKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIF----------- 256
Query: 352 SLVIWAKP-LLQTSNFKELVDPRLADAYDLAE----MKRAMLTASVCIHHLSTMRPQMTR 406
SL + P +L S F +LV D Y +A+ K C T RP +
Sbjct: 257 SLGLNPYPGILVNSKFYKLVK----DGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQ 312
Query: 407 VLQLLRGEGGQTDLKPK 423
+ L+ E Q D + +
Sbjct: 313 ICSFLQ-EQAQEDRRER 328
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 9/200 (4%)
Query: 144 FNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNA 203
F IGKG EV+KG + + E E+ I D E+ +++ + P
Sbjct: 29 FTKLEKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 87
Query: 204 AKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXX 262
K G + + +++++L GS LL L+ T I I +GL YL
Sbjct: 88 TKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSEKK 145
Query: 263 XXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGI 322
KA+N+LLSE E +++DFG+A L D F GT +++PE
Sbjct: 146 IHRDI---KAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF--VGTPFWMAPEVIKQSA 200
Query: 323 VDEKTDVFAFGVLLLELITG 342
D K D+++ G+ +EL G
Sbjct: 201 YDSKADIWSLGITAIELARG 220
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 81/196 (41%), Gaps = 12/196 (6%)
Query: 150 IGKGGHAEVYKGCL--PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLI 207
IG+G +V++G P+ + FL E + +HP+ KLI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 208 GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXX 267
G TEN ++++ G L S L L+ A ++ L YL
Sbjct: 458 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDI 517
Query: 268 XXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV---FPIEGTFGYLSPEYFMHGIVD 324
A N+L+S ++ DFGL++++ D+ + PI+ +++PE
Sbjct: 518 A---ARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK----WMAPESINFRRFT 570
Query: 325 EKTDVFAFGVLLLELI 340
+DV+ FGV + E++
Sbjct: 571 SASDVWMFGVCMWEIL 586
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 12/205 (5%)
Query: 144 FNSENL-----IGKGGHAEVYKGCL-PDGEXXXXXXXXXXXXEDEERISDFLSELGIVAH 197
N E+L IG+G EV+ G L D D + + FL E I+
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLK--AKFLQEARILKQ 168
Query: 198 INHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQY 256
+HPN +LIG T+ ++V++ + G + L L ++ A G++Y
Sbjct: 169 YSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEY 228
Query: 257 LXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPE 316
L A N L++E +ISDFG+++ D + + +PE
Sbjct: 229 LESKCCIHRDLA---ARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPE 285
Query: 317 YFMHGIVDEKTDVFAFGVLLLELIT 341
+G ++DV++FG+LL E +
Sbjct: 286 ALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 87/207 (42%), Gaps = 17/207 (8%)
Query: 149 LIGKGGHAEVYKGCLP--DGEXXXXXXXXXXXXEDEER-ISDFLSELGIVAHINHPNAAK 205
++G+G V +G L DG +R I +FLSE + +HPN +
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 206 LIGFSTENGFH------LVLQFLPHGSLSS-LLFGSTEC----LEWTIRYKIALGIAEGL 254
L+G E ++L F+ +G L + LL+ E + K + IA G+
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 255 QYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLS 314
+YL A N +L +D ++DFGL+K + + + +++
Sbjct: 161 EYLSNRNFLHRDLA---ARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 217
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELIT 341
E + K+DV+AFGV + E+ T
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 79/209 (37%), Gaps = 10/209 (4%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLS-ELGIVAHINH 200
D+F+ +GKG VY + ++E + L E+ I +H+ H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 201 PNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXX 259
PN ++ F +L+L+F P G L L E + A + E L
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQ----RSATFMEELADALHY 129
Query: 260 XXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFM 319
K N+L+ E +I+DFG + P + GT YL PE
Sbjct: 130 CHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIE 185
Query: 320 HGIVDEKTDVFAFGVLLLELITGRRAVDS 348
DEK D++ GVL E + G DS
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 79/209 (37%), Gaps = 10/209 (4%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLS-ELGIVAHINH 200
D+F+ +GKG VY + ++E + L E+ I +H+ H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 201 PNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXX 259
PN ++ F +L+L+F P G L L E + A + E L
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQ----RSATFMEELADALHY 129
Query: 260 XXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFM 319
K N+L+ E +I+DFG + P + GT YL PE
Sbjct: 130 CHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIE 185
Query: 320 HGIVDEKTDVFAFGVLLLELITGRRAVDS 348
DEK D++ GVL E + G DS
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 79/209 (37%), Gaps = 10/209 (4%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLS-ELGIVAHINH 200
D+F+ +GKG VY + ++E + L E+ I +H+ H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 201 PNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXX 259
PN ++ F +L+L+F P G L L E + A + E L
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQ----RSATFMEELADALHY 130
Query: 260 XXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFM 319
K N+L+ E +I+DFG + P + GT YL PE
Sbjct: 131 CHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYLPPEMIE 186
Query: 320 HGIVDEKTDVFAFGVLLLELITGRRAVDS 348
DEK D++ GVL E + G DS
Sbjct: 187 GKTHDEKVDLWCAGVLCYEFLVGMPPFDS 215
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 6/196 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
E ++ E +++ ++HP KL F + + L + +G L + E
Sbjct: 50 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 109
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K NILL+ED QI+DFG AK L
Sbjct: 110 CTRFYTA-EIVSALEYLHGKGIIHRDL---KPENILLNEDMHIQITDFGTAKVLSPESKQ 165
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPL 360
GT Y+SPE + +D++A G ++ +L+ G + + L I+ K +
Sbjct: 166 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKII 224
Query: 361 LQTSNFKELVDPRLAD 376
+F E P+ D
Sbjct: 225 KLEYDFPEKFFPKARD 240
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 6/196 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
E ++ E +++ ++HP KL F + + L + +G L + E
Sbjct: 71 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 130
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K NILL+ED QI+DFG AK L
Sbjct: 131 CTRFYTA-EIVSALEYLHGKGIIHRDL---KPENILLNEDMHIQITDFGTAKVLSPESKQ 186
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPL 360
GT Y+SPE + +D++A G ++ +L+ G + + L I+ K +
Sbjct: 187 ARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKII 245
Query: 361 LQTSNFKELVDPRLAD 376
+F E P+ D
Sbjct: 246 KLEYDFPEKFFPKARD 261
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 14/210 (6%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHP 201
+NF IG+G + VYK E E S + E+ ++ +NHP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 202 NAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXX 260
N KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 261 XXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLSPEY 317
K N+L++ + +++DFGLA+ ++H +V T Y +PE
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-----TLWYRAPEI 174
Query: 318 FM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
+ D+++ G + E++T RRA+
Sbjct: 175 LLGXKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 188 FLSELGIVAHI-NHPNAAKLIGFSTENG--FHLVLQFLPHGSLSSLL------------- 231
+SEL I+ HI +H N L+G T+ G ++++F G+LS+ L
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 232 FGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLA 291
+ LE I Y + +A+G+++L A NILLSE +I DFGLA
Sbjct: 137 YKDFLTLEHLIXY--SFQVAKGMEFLASRKXIHRDLA---ARNILLSEKNVVKIXDFGLA 191
Query: 292 KWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ + + + +++PE + ++DV++FGVLL E+ +
Sbjct: 192 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 6/196 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
E ++ E +++ ++HP KL F + + L + +G L + E
Sbjct: 51 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 110
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K NILL+ED QI+DFG AK L
Sbjct: 111 CTRFYTA-EIVSALEYLHGKGIIHRDL---KPENILLNEDMHIQITDFGTAKVLSPESKQ 166
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPL 360
GT Y+SPE + +D++A G ++ +L+ G + + L I+ K +
Sbjct: 167 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKII 225
Query: 361 LQTSNFKELVDPRLAD 376
+F E P+ D
Sbjct: 226 KLEYDFPEKFFPKARD 241
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 14/213 (6%)
Query: 139 AATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHI 198
+ +NF IG+G + VYK E E S + E+ ++ +
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 199 NHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYL 257
NHPN KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 258 XXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLS 314
K N+L++ + +++DFGLA+ ++H +V T Y +
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-----TLWYRA 172
Query: 315 PEYFM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
PE + D+++ G + E++T RRA+
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 8/159 (5%)
Query: 186 SDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRY 244
+ + EL ++ N P G F ++ + ++ + GSL +L + E I
Sbjct: 52 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE-QILG 110
Query: 245 KIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVF 304
K+++ + +GL YL K SNIL++ E ++ DFG++ L D ++ V
Sbjct: 111 KVSIAVIKGLTYLREKHKIMHRDV--KPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV- 167
Query: 305 PIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
GT Y+SPE ++D+++ G+ L+E+ GR
Sbjct: 168 ---GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 14/210 (6%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHP 201
+NF IG+G + VYK E E S + E+ ++ +NHP
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 202 NAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXX 260
N KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 261 XXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLSPEY 317
K N+L++ + +++DFGLA+ ++H +V T Y +PE
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-----TLWYRAPEI 178
Query: 318 FM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
+ D+++ G + E++T RRA+
Sbjct: 179 LLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 207
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 6/196 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
E ++ E +++ ++HP KL F + + L + +G L + E
Sbjct: 74 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 133
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K NILL+ED QI+DFG AK L
Sbjct: 134 CTRFYTA-EIVSALEYLHGKGIIHRDL---KPENILLNEDMHIQITDFGTAKVLSPESKQ 189
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPL 360
GT Y+SPE + +D++A G ++ +L+ G + + L I+ K +
Sbjct: 190 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKII 248
Query: 361 LQTSNFKELVDPRLAD 376
+F E P+ D
Sbjct: 249 KLEYDFPEKFFPKARD 264
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 111/253 (43%), Gaps = 45/253 (17%)
Query: 188 FLSELGIVAHI-NHPNAAKLIGFSTENGFHLVL-QFLPHGSLSSLLFGSTEC-------- 237
+SEL I++H+ H N L+G T G LV+ ++ +G L + L E
Sbjct: 88 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR 147
Query: 238 -LEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPD 296
LE + +A+G+ +L A N+LL+ + A+I DFGLA+ + +
Sbjct: 148 PLELRDLLHFSSQVAQGMAFLASKNCIHRDVA---ARNVLLTNGHVAKIGDFGLARDIMN 204
Query: 297 NWSHHIV-----FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQ 351
+ S++IV P++ +++PE + ++DV+++G+LL E+
Sbjct: 205 D-SNYIVKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIF----------- 248
Query: 352 SLVIWAKP-LLQTSNFKELVDPRLADAYDLAE----MKRAMLTASVCIHHLSTMRPQMTR 406
SL + P +L S F +LV D Y +A+ K C T RP +
Sbjct: 249 SLGLNPYPGILVNSKFYKLVK----DGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQ 304
Query: 407 VLQLLRGEGGQTD 419
+ L+ E Q D
Sbjct: 305 ICSFLQ-EQAQED 316
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 6/196 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
E ++ E +++ ++HP KL F + + L + +G L + E
Sbjct: 78 ENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 137
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K NILL+ED QI+DFG AK L
Sbjct: 138 CTRFYTA-EIVSALEYLHGKGIIHRDL---KPENILLNEDMHIQITDFGTAKVLSPESKQ 193
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPL 360
GT Y+SPE + +D++A G ++ +L+ G + + L I+ K +
Sbjct: 194 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKII 252
Query: 361 LQTSNFKELVDPRLAD 376
+F E P+ D
Sbjct: 253 KLEYDFPEKFFPKARD 268
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 17/168 (10%)
Query: 188 FLSELGIVAHI-NHPNAAKLIGFSTENG--FHLVLQFLPHGSLSSLLFGS-TECLEWTIR 243
+SEL I+ HI +H N L+G T+ G ++++F G+LS+ L E + +
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 244 YK----------IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKW 293
YK + +A+G+++L A NILLSE +I DFGLA+
Sbjct: 137 YKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLA---ARNILLSEKNVVKICDFGLARD 193
Query: 294 LPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ + + +++PE + ++DV++FGVLL E+ +
Sbjct: 194 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 14/210 (6%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHP 201
+NF IG+G + VYK E E S + E+ ++ +NHP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 202 NAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXX 260
N KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 261 XXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLSPEY 317
K N+L++ + +++DFGLA+ ++H +V T Y +PE
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-----TLWYRAPEI 174
Query: 318 FM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
+ D+++ G + E++T RRA+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 6/196 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
E ++ E +++ ++HP KL F + + L + +G L + E
Sbjct: 48 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 107
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K NILL+ED QI+DFG AK L
Sbjct: 108 CTRFYTA-EIVSALEYLHGKGIIHRDL---KPENILLNEDMHIQITDFGTAKVLSPESKQ 163
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPL 360
GT Y+SPE + +D++A G ++ +L+ G + + L I+ K +
Sbjct: 164 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKII 222
Query: 361 LQTSNFKELVDPRLAD 376
+F E P+ D
Sbjct: 223 KLEYDFPEKFFPKARD 238
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 6/196 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
E ++ E +++ ++HP KL F + + L + +G L + E
Sbjct: 73 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 132
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K NILL+ED QI+DFG AK L
Sbjct: 133 CTRFYTA-EIVSALEYLHGKGIIHRDL---KPENILLNEDMHIQITDFGTAKVLSPESKQ 188
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPL 360
GT Y+SPE + +D++A G ++ +L+ G + + L I+ K +
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKII 247
Query: 361 LQTSNFKELVDPRLAD 376
+F E P+ D
Sbjct: 248 KLEYDFPEKFFPKARD 263
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 6/196 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
E ++ E +++ ++HP KL F + + L + +G L + E
Sbjct: 49 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 108
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K NILL+ED QI+DFG AK L
Sbjct: 109 CTRFYTA-EIVSALEYLHGKGIIHRDL---KPENILLNEDMHIQITDFGTAKVLSPESKQ 164
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPL 360
GT Y+SPE + +D++A G ++ +L+ G + + L I+ K +
Sbjct: 165 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKII 223
Query: 361 LQTSNFKELVDPRLAD 376
+F E P+ D
Sbjct: 224 KLEYDFPEKFFPKARD 239
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 14/210 (6%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHP 201
+NF IG+G + VYK E E S + E+ ++ +NHP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 202 NAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXX 260
N KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 261 XXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLSPEY 317
K N+L++ + +++DFGLA+ ++H +V T Y +PE
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-----TLWYRAPEI 174
Query: 318 FM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
+ D+++ G + E++T RRA+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 14/210 (6%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHP 201
+NF IG+G + VYK E E S + E+ ++ +NHP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 202 NAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXX 260
N KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 261 XXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLSPEY 317
K N+L++ + +++DFGLA+ ++H +V T Y +PE
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-----TLWYRAPEI 181
Query: 318 FM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
+ D+++ G + E++T RRA+
Sbjct: 182 LLGXKYYSTAVDIWSLGCIFAEMVT-RRAL 210
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 14/210 (6%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHP 201
+NF IG+G + VYK E E S + E+ ++ +NHP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 202 NAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXX 260
N KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 261 XXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLSPEY 317
K N+L++ + +++DFGLA+ ++H +V T Y +PE
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-----TLWYRAPEI 173
Query: 318 FM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
+ D+++ G + E++T RRA+
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 88/182 (48%), Gaps = 30/182 (16%)
Query: 182 EERISDFLSELGIVAHI-NHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLL-------- 231
E+ +SD +SE+ ++ I H N L+G T++G ++++++ G+L L
Sbjct: 127 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 186
Query: 232 ---FGSTECLEWTIRYK----IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQ 284
+ E + +K +A G++YL A N+L++E+ +
Sbjct: 187 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA---ARNVLVTENNVMK 243
Query: 285 ISDFGLAKWLPDNWSHHIVFPIEGTFG-----YLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
I+DFGLA+ + ++I + + T G +++PE + ++DV++FGVL+ E+
Sbjct: 244 IADFGLARDI-----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 298
Query: 340 IT 341
T
Sbjct: 299 FT 300
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 6/196 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
E ++ E +++ ++HP KL F + + L + +G L + E
Sbjct: 71 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 130
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K NILL+ED QI+DFG AK L
Sbjct: 131 CTRFYTA-EIVSALEYLHGKGIIHRDL---KPENILLNEDMHIQITDFGTAKVLSPESKQ 186
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPL 360
GT Y+SPE + +D++A G ++ +L+ G + + L I+ K +
Sbjct: 187 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKII 245
Query: 361 LQTSNFKELVDPRLAD 376
+F E P+ D
Sbjct: 246 KLEYDFPEKFFPKARD 261
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 149 LIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIG 208
++GKG + VY G D D E+ + H+ H N + +G
Sbjct: 15 VLGKGTYGIVYAG--RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG 72
Query: 209 FSTENGF-HLVLQFLPHGSLSSLL---FGSTECLEWTIRYKIALGIAEGLQYLXXXXXXX 264
+ENGF + ++ +P GSLS+LL +G + E TI + I EGL+YL
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQ-ILEGLKYL---HDNQ 128
Query: 265 XXXXXXKASNILLSEDYEA--QISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGI 322
K N+L++ Y +ISDFG +K L F GT Y++PE G
Sbjct: 129 IVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETF--TGTLQYMAPEIIDKGP 185
Query: 323 --VDEKTDVFAFGVLLLELITGR 343
+ D+++ G ++E+ TG+
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGK 208
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 14/210 (6%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHP 201
+NF IG+G + VYK E E S + E+ ++ +NHP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 202 NAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXX 260
N KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 261 XXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLSPEY 317
K N+L++ + +++DFGLA+ ++H +V T Y +PE
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-----TLWYRAPEI 174
Query: 318 FM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
+ D+++ G + E++T RRA+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 6/196 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
E ++ E +++ ++HP KL F + + L + +G L + E
Sbjct: 71 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 130
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K NILL+ED QI+DFG AK L
Sbjct: 131 CTRFYTA-EIVSALEYLHGKGIIHRDL---KPENILLNEDMHIQITDFGTAKVLSPESKQ 186
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPL 360
GT Y+SPE + +D++A G ++ +L+ G + + L I+ K +
Sbjct: 187 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKII 245
Query: 361 LQTSNFKELVDPRLAD 376
+F E P+ D
Sbjct: 246 KLEYDFPEKFFPKARD 261
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 6/196 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
E ++ E +++ ++HP KL F + + L + +G L + E
Sbjct: 74 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 133
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K NILL+ED QI+DFG AK L
Sbjct: 134 CTRFYTA-EIVSALEYLHGKGIIHRDL---KPENILLNEDMHIQITDFGTAKVLSPESKQ 189
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPL 360
GT Y+SPE + +D++A G ++ +L+ G + + L I+ K +
Sbjct: 190 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKII 248
Query: 361 LQTSNFKELVDPRLAD 376
+F E P+ D
Sbjct: 249 KLEYDFPEKFFPKARD 264
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 6/196 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
E ++ E +++ ++HP KL F + + L + +G L + E
Sbjct: 73 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 132
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K NILL+ED QI+DFG AK L
Sbjct: 133 CTRFYTA-EIVSALEYLHGKGIIHRDL---KPENILLNEDMHIQITDFGTAKVLSPESKQ 188
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPL 360
GT Y+SPE + +D++A G ++ +L+ G + + L I+ K +
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKII 247
Query: 361 LQTSNFKELVDPRLAD 376
+F E P+ D
Sbjct: 248 KLEYDFPEKFFPKARD 263
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 6/196 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
E ++ E +++ ++HP KL F + + L + +G L + E
Sbjct: 71 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 130
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K NILL+ED QI+DFG AK L
Sbjct: 131 CTRFYTA-EIVSALEYLHGKGIIHRDL---KPENILLNEDMHIQITDFGTAKVLSPESKQ 186
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPL 360
GT Y+SPE + +D++A G ++ +L+ G + + L I+ K +
Sbjct: 187 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKII 245
Query: 361 LQTSNFKELVDPRLAD 376
+F E P+ D
Sbjct: 246 KLEYDFPEKFFPKARD 261
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 14/213 (6%)
Query: 139 AATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHI 198
+ +NF IG+G + VYK E E S + E+ ++ +
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 199 NHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYL 257
NHPN KL+ TEN +LV +FL H L + F L I + + LQ L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKT--FMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 258 XXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLS 314
K N+L++ + +++DFGLA+ + H +V T Y +
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-----TLWYRA 174
Query: 315 PEYFM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
PE + D+++ G + E++T RRA+
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 14/210 (6%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHP 201
+NF IG+G + VYK E E S + E+ ++ +NHP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 202 NAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXX 260
N KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 261 XXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLSPEY 317
K N+L++ + +++DFGLA+ ++H +V T Y +PE
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-----TLWYRAPEI 173
Query: 318 FM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
+ D+++ G + E++T RRA+
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 6/196 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
E ++ E +++ ++HP KL F + + L + +G L + E
Sbjct: 73 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 132
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K NILL+ED QI+DFG AK L
Sbjct: 133 CTRFYTA-EIVSALEYLHGKGIIHRDL---KPENILLNEDMHIQITDFGTAKVLSPESKQ 188
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPL 360
GT Y+SPE + +D++A G ++ +L+ G + + L I+ K +
Sbjct: 189 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKII 247
Query: 361 LQTSNFKELVDPRLAD 376
+F E P+ D
Sbjct: 248 KLEYDFPEKFFPKARD 263
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 14/210 (6%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHP 201
+NF IG+G + VYK E E S + E+ ++ +NHP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 202 NAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXX 260
N KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 261 XXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLSPEY 317
K N+L++ + +++DFGLA+ ++H +V T Y +PE
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-----TLWYRAPEI 181
Query: 318 FM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
+ D+++ G + E++T RRA+
Sbjct: 182 LLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 210
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 14/210 (6%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHP 201
+NF IG+G + VYK E E S + E+ ++ +NHP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 202 NAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXX 260
N KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 261 XXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLSPEY 317
K N+L++ + +++DFGLA+ ++H +V T Y +PE
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-----TLWYRAPEI 174
Query: 318 FM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
+ D+++ G + E++T RRA+
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 14/210 (6%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHP 201
+NF IG+G + VYK E E S + E+ ++ +NHP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 202 NAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXX 260
N KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 261 XXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLSPEY 317
K N+L++ + +++DFGLA+ ++H +V T Y +PE
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-----TLWYRAPEI 173
Query: 318 FM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
+ D+++ G + E++T RRA+
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 23/172 (13%)
Query: 188 FLSELGIVAHI-NHPNAAKLIGFSTENG--FHLVLQFLPHGSLSSLL------------- 231
+SEL I+ HI +H N L+G T+ G ++++F G+LS+ L
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPE 138
Query: 232 --FGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFG 289
+ LE I Y + +A+G+++L A NILLSE +I DFG
Sbjct: 139 DLYKDFLTLEHLIXY--SFQVAKGMEFLASRKXIHRDLA---ARNILLSEKNVVKICDFG 193
Query: 290 LAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
LA+ + + +++PE + ++DV++FGVLL E+ +
Sbjct: 194 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 87/213 (40%), Gaps = 14/213 (6%)
Query: 139 AATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHI 198
+ +NF IG+G + VYK E E S + E+ ++ +
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 199 NHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYL 257
NHPN KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 258 XXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLS 314
K N+L++ + +++DFGLA+ + H +V T Y +
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-----TLWYRA 173
Query: 315 PEYFM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
PE + D+++ G + E++T RRA+
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 126/315 (40%), Gaps = 27/315 (8%)
Query: 126 RHSWKNFDFAELAAATDN-FNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEER 184
R K D L + F+ +G+G + VYK E
Sbjct: 12 RRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAI----HKETGQIVAIKQVPVESD 67
Query: 185 ISDFLSELGIVAHINHPNAAKLIGFSTEN-GFHLVLQFLPHGSLSSLLFGSTECLEWTIR 243
+ + + E+ I+ + P+ K G +N +V+++ GS+S ++ + L
Sbjct: 68 LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEI 127
Query: 244 YKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV 303
I +GL+YL KA NILL+ + A+++DFG+A L D +
Sbjct: 128 ATILQSTLKGLEYLHFMRKIHRDI---KAGNILLNTEGHAKLADFGVAGQLTDXMAKRNX 184
Query: 304 FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRA---VDSRRQSLVI----- 355
+ GT +++PE + D+++ G+ +E+ G+ + R +I
Sbjct: 185 --VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPP 242
Query: 356 --WAKPLLQTSNFKELVDPRLADAYDLAEMKRAMLTASVCIHHLSTMRPQMTRVLQLLRG 413
+ KP L + NF + V L + + +RA TA+ + H + +L+ L
Sbjct: 243 PTFRKPELWSDNFTDFVKQCLVKSPE----QRA--TATQLLQHPFVRSAKGVSILRDLIN 296
Query: 414 EGGQTDLKPKPSARR 428
E LK + S +R
Sbjct: 297 EAMDVKLKRQESQQR 311
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 87/213 (40%), Gaps = 14/213 (6%)
Query: 139 AATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHI 198
+ +NF IG+G + VYK E E S + E+ ++ +
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 199 NHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYL 257
NHPN KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 258 XXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLS 314
K N+L++ + +++DFGLA+ + H +V T Y +
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-----TLWYRA 174
Query: 315 PEYFM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
PE + D+++ G + E++T RRA+
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 87/213 (40%), Gaps = 14/213 (6%)
Query: 139 AATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHI 198
+ +NF IG+G + VYK E E S + E+ ++ +
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 199 NHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYL 257
NHPN KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 258 XXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLS 314
K N+L++ + +++DFGLA+ + H +V T Y +
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-----TLWYRA 173
Query: 315 PEYFM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
PE + D+++ G + E++T RRA+
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 87/213 (40%), Gaps = 14/213 (6%)
Query: 139 AATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHI 198
+ +NF IG+G + VYK E E S + E+ ++ +
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 199 NHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYL 257
NHPN KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 258 XXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLS 314
K N+L++ + +++DFGLA+ + H +V T Y +
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-----TLWYRA 172
Query: 315 PEYFM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
PE + D+++ G + E++T RRA+
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 15/211 (7%)
Query: 138 AAATDNFNSENLIGKGGHAEVY--KGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIV 195
A +D + + ++GKG EV K + E + ++ S L E+ ++
Sbjct: 22 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES-LLREVQLL 80
Query: 196 AHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGL 254
++HPN KL F + G F+LV + G L + E +I + G+
Sbjct: 81 KQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-RIIRQVLSGI 139
Query: 255 QYLXXXXXXXXXXXXXKASNILL---SEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFG 311
Y K N+LL S+D +I DFGL+ + GT
Sbjct: 140 TY---XHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI---GTAY 193
Query: 312 YLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
Y++PE +HG DEK DV++ GV+L L++G
Sbjct: 194 YIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 87/212 (41%), Gaps = 14/212 (6%)
Query: 140 ATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHIN 199
+ +NF IG+G + VYK E E S + E+ ++ +N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 200 HPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLX 258
HPN KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 259 XXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLSP 315
K N+L++ + +++DFGLA+ + H +V T Y +P
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-----TLWYRAP 172
Query: 316 EYFM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
E + D+++ G + E++T RRA+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 87/213 (40%), Gaps = 14/213 (6%)
Query: 139 AATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHI 198
+ +NF IG+G + VYK E E S + E+ ++ +
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 199 NHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYL 257
NHPN KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 258 XXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLS 314
K N+L++ + +++DFGLA+ + H +V T Y +
Sbjct: 119 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-----TLWYRA 173
Query: 315 PEYFM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
PE + D+++ G + E++T RRA+
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 87/213 (40%), Gaps = 14/213 (6%)
Query: 139 AATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHI 198
+ +NF IG+G + VYK E E S + E+ ++ +
Sbjct: 4 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 199 NHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYL 257
NHPN KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGL 120
Query: 258 XXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLS 314
K N+L++ + +++DFGLA+ + H +V T Y +
Sbjct: 121 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-----TLWYRA 175
Query: 315 PEYFM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
PE + D+++ G + E++T RRA+
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 207
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 6/196 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
E ++ E +++ ++HP KL F + + L + +G L + E
Sbjct: 55 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 114
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K NILL+ED QI+DFG AK L
Sbjct: 115 CTRFYTA-EIVSALEYLHGKGIIHRDL---KPENILLNEDMHIQITDFGTAKVLSPESKQ 170
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPL 360
GT Y+SPE + +D++A G ++ +L+ G + + L I+ K +
Sbjct: 171 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKII 229
Query: 361 LQTSNFKELVDPRLAD 376
+F E P+ D
Sbjct: 230 KLEYDFPEKFFPKARD 245
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 87/213 (40%), Gaps = 14/213 (6%)
Query: 139 AATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHI 198
+ +NF IG+G + VYK E E S + E+ ++ +
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 199 NHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYL 257
NHPN KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 258 XXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLS 314
K N+L++ + +++DFGLA+ + H +V T Y +
Sbjct: 118 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-----TLWYRA 172
Query: 315 PEYFM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
PE + D+++ G + E++T RRA+
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 87/212 (41%), Gaps = 14/212 (6%)
Query: 140 ATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHIN 199
+ +NF IG+G + VYK E E S + E+ ++ +N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 200 HPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLX 258
HPN KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 259 XXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLSP 315
K N+L++ + +++DFGLA+ + H +V T Y +P
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-----TLWYRAP 172
Query: 316 EYFM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
E + D+++ G + E++T RRA+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 87/213 (40%), Gaps = 14/213 (6%)
Query: 139 AATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHI 198
+ +NF IG+G + VYK E E S + E+ ++ +
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 199 NHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYL 257
NHPN KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 258 XXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLS 314
K N+L++ + +++DFGLA+ + H +V T Y +
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-----TLWYRA 174
Query: 315 PEYFM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
PE + D+++ G + E++T RRA+
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 88/182 (48%), Gaps = 30/182 (16%)
Query: 182 EERISDFLSELGIVAHI-NHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLL-------- 231
E+ +SD +SE+ ++ I H N L+G T++G ++++++ G+L L
Sbjct: 68 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 127
Query: 232 ---FGSTECLEWTIRYK----IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQ 284
+ E + +K +A G++YL A N+L++E+ +
Sbjct: 128 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLT---ARNVLVTENNVMK 184
Query: 285 ISDFGLAKWLPDNWSHHIVFPIEGTFG-----YLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
I+DFGLA+ + ++I + + T G +++PE + ++DV++FGVL+ E+
Sbjct: 185 IADFGLARDI-----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 239
Query: 340 IT 341
T
Sbjct: 240 FT 241
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 88/182 (48%), Gaps = 30/182 (16%)
Query: 182 EERISDFLSELGIVAHI-NHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLL-------- 231
E+ +SD +SE+ ++ I H N L+G T++G ++++++ G+L L
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 232 ---FGSTECLEWTIRYK----IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQ 284
+ E + +K +A G++YL A N+L++E+ +
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA---ARNVLVTENNVMR 197
Query: 285 ISDFGLAKWLPDNWSHHIVFPIEGTFG-----YLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
I+DFGLA+ + ++I + + T G +++PE + ++DV++FGVL+ E+
Sbjct: 198 IADFGLARDI-----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
Query: 340 IT 341
T
Sbjct: 253 FT 254
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 88/182 (48%), Gaps = 30/182 (16%)
Query: 182 EERISDFLSELGIVAHI-NHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLL-------- 231
E+ +SD +SE+ ++ I H N L+G T++G ++++++ G+L L
Sbjct: 73 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 132
Query: 232 ---FGSTECLEWTIRYK----IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQ 284
+ E + +K +A G++YL A N+L++E+ +
Sbjct: 133 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA---ARNVLVTENNVMK 189
Query: 285 ISDFGLAKWLPDNWSHHIVFPIEGTFG-----YLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
I+DFGLA+ + ++I + + T G +++PE + ++DV++FGVL+ E+
Sbjct: 190 IADFGLARDI-----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 244
Query: 340 IT 341
T
Sbjct: 245 FT 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 88/182 (48%), Gaps = 30/182 (16%)
Query: 182 EERISDFLSELGIVAHI-NHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLL-------- 231
E+ +SD +SE+ ++ I H N L+G T++G ++++++ G+L L
Sbjct: 70 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 129
Query: 232 ---FGSTECLEWTIRYK----IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQ 284
+ E + +K +A G++YL A N+L++E+ +
Sbjct: 130 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA---ARNVLVTENNVMK 186
Query: 285 ISDFGLAKWLPDNWSHHIVFPIEGTFG-----YLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
I+DFGLA+ + ++I + + T G +++PE + ++DV++FGVL+ E+
Sbjct: 187 IADFGLARDI-----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 241
Query: 340 IT 341
T
Sbjct: 242 FT 243
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 87/212 (41%), Gaps = 14/212 (6%)
Query: 140 ATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHIN 199
+ +NF IG+G + VYK E E S + E+ ++ +N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 200 HPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLX 258
HPN KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 259 XXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLSP 315
K N+L++ + +++DFGLA+ + H +V T Y +P
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-----TLWYRAP 172
Query: 316 EYFM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
E + D+++ G + E++T RRA+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 6/196 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
E ++ E +++ ++HP KL F + + L + +G L + E
Sbjct: 70 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 129
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K NILL+ED QI+DFG AK L
Sbjct: 130 CTRFYTA-EIVSALEYLHGKGIIHRDL---KPENILLNEDMHIQITDFGTAKVLSPESKQ 185
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPL 360
GT Y+SPE + +D++A G ++ +L+ G + + L I+ K +
Sbjct: 186 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKII 244
Query: 361 LQTSNFKELVDPRLAD 376
+F E P+ D
Sbjct: 245 KLEYDFPEKFFPKARD 260
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 25/174 (14%)
Query: 188 FLSELGIVAHI-NHPNAAKLIGFSTENG--FHLVLQFLPHGSLSSLL------------- 231
+SEL I+ HI +H N L+G T+ G ++++F G+LS+ L
Sbjct: 114 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 173
Query: 232 ----FGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISD 287
+ LE I Y + +A+G+++L A NILLSE +I D
Sbjct: 174 PEDLYKDFLTLEHLICY--SFQVAKGMEFLASRKCIHRDLA---ARNILLSEKNVVKICD 228
Query: 288 FGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
FGLA+ + + + +++PE + ++DV++FGVLL E+ +
Sbjct: 229 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 87/212 (41%), Gaps = 14/212 (6%)
Query: 140 ATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHIN 199
+ +NF IG+G + VYK E E S + E+ ++ +N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 200 HPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLX 258
HPN KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 259 XXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLSP 315
K N+L++ + +++DFGLA+ + H +V T Y +P
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-----TLWYRAP 172
Query: 316 EYFM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
E + D+++ G + E++T RRA+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 14/210 (6%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHP 201
+NF IG+G + VYK E E S + E+ ++ +NHP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 202 NAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXX 260
N KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 261 XXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLSPEY 317
K N+L++ + +++DFGLA+ + H +V T Y +PE
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-----TLWYRAPEI 173
Query: 318 FM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
+ D+++ G + E++T RRA+
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 25/174 (14%)
Query: 188 FLSELGIVAHI-NHPNAAKLIGFSTENG--FHLVLQFLPHGSLSSLL------------- 231
+SEL I+ HI +H N L+G T+ G ++++F G+LS+ L
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 232 ----FGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISD 287
+ LE I Y + +A+G+++L A NILLSE +I D
Sbjct: 137 PEDLYKDFLTLEHLICY--SFQVAKGMEFLASRKCIHRDLA---ARNILLSEKNVVKICD 191
Query: 288 FGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
FGLA+ + + + +++PE + ++DV++FGVLL E+ +
Sbjct: 192 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 88/182 (48%), Gaps = 30/182 (16%)
Query: 182 EERISDFLSELGIVAHI-NHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLL-------- 231
E+ +SD +SE+ ++ I H N L+G T++G ++++++ G+L L
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 232 ---FGSTECLEWTIRYK----IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQ 284
+ E + +K +A G++YL A N+L++E+ +
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA---ARNVLVTENNVMK 197
Query: 285 ISDFGLAKWLPDNWSHHIVFPIEGTFG-----YLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
I+DFGLA+ + ++I + + T G +++PE + ++DV++FGVL+ E+
Sbjct: 198 IADFGLARDI-----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
Query: 340 IT 341
T
Sbjct: 253 FT 254
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 14/210 (6%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHP 201
+NF IG+G + VYK E E S + E+ ++ +NHP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 202 NAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXX 260
N KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 261 XXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLSPEY 317
K N+L++ + +++DFGLA+ + H +V T Y +PE
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-----TLWYRAPEI 173
Query: 318 FM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
+ D+++ G + E++T RRA+
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 6/196 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
E ++ E +++ ++HP KL F + + L + +G L + E
Sbjct: 70 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 129
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K NILL+ED QI+DFG AK L
Sbjct: 130 CTRFYTA-EIVSALEYLHGKGIIHRDL---KPENILLNEDMHIQITDFGTAKVLSPESKQ 185
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPL 360
GT Y+SPE + +D++A G ++ +L+ G + + L I+ K +
Sbjct: 186 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL-IFQKII 244
Query: 361 LQTSNFKELVDPRLAD 376
+F E P+ D
Sbjct: 245 KLEYDFPEKFFPKARD 260
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 87/212 (41%), Gaps = 14/212 (6%)
Query: 140 ATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHIN 199
+ +NF IG+G + VYK E E S + E+ ++ +N
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 200 HPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLX 258
HPN KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKD--FMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 259 XXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLSP 315
K N+L++ + +++DFGLA+ + H +V T Y +P
Sbjct: 118 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-----TLWYRAP 172
Query: 316 EYFM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
E + D+++ G + E++T RRA+
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 203
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 30/182 (16%)
Query: 182 EERISDFLSELGIVAHI-NHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLL-------- 231
E+ +SD +SE+ ++ I H N L+G T++G ++++++ G+L L
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 232 ---FGSTECLEWTIRYK----IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQ 284
+ E + +K +A G++YL A N+L++E+ +
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA---ARNVLVTENNVMK 197
Query: 285 ISDFGLAKWLPDNWSHHIVFPIEGTFG-----YLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
I+DFGLA+ + ++I + T G +++PE + ++DV++FGVL+ E+
Sbjct: 198 IADFGLARDI-----NNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
Query: 340 IT 341
T
Sbjct: 253 FT 254
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNW-SHHIVFPIEG 308
IA+ Q L K +NIL+S ++ DFG+A+ + D+ S + G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIG 181
Query: 309 TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
T YLSPE VD ++DV++ G +L E++TG
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 88/182 (48%), Gaps = 30/182 (16%)
Query: 182 EERISDFLSELGIVAHI-NHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLL-------- 231
E+ +SD +SE+ ++ I H N L+G T++G ++++++ G+L L
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 232 ---FGSTECLEWTIRYK----IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQ 284
+ E + +K +A G++YL A N+L++E+ +
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA---ARNVLVTENNVMK 197
Query: 285 ISDFGLAKWLPDNWSHHIVFPIEGTFG-----YLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
I+DFGLA+ + ++I + + T G +++PE + ++DV++FGVL+ E+
Sbjct: 198 IADFGLARDI-----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
Query: 340 IT 341
T
Sbjct: 253 FT 254
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Query: 188 FLSELGIVAHINHPNAAKL---IGFSTENGFHLVLQFLPHGSLSSLLFGSTECL-----E 239
+SE+ ++ + HPN + I T ++V+++ G L+S++ T+ E
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 240 WTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWS 299
+ +R L +A + K +N+ L ++ DFGLA+ L + S
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS 171
Query: 300 HHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
F GT Y+SPE +EK+D+++ G LL EL
Sbjct: 172 FAKTFV--GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 25/174 (14%)
Query: 188 FLSELGIVAHI-NHPNAAKLIGFSTENG--FHLVLQFLPHGSLSSLL------------- 231
+SEL I+ HI +H N L+G T+ G ++++F G+LS+ L
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEA 138
Query: 232 ----FGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISD 287
+ LE I Y + +A+G+++L A NILLSE +I D
Sbjct: 139 PEDLYKDFLTLEHLICY--SFQVAKGMEFLASRKCIHRDLA---ARNILLSEKNVVKICD 193
Query: 288 FGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
FGLA+ + + + +++PE + ++DV++FGVLL E+ +
Sbjct: 194 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 14/213 (6%)
Query: 139 AATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHI 198
+ +NF IG+G + VYK E E S + E+ ++ +
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 199 NHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYL 257
NHPN KL+ TEN +LV +FL S+ F L I + + LQ L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 258 XXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLS 314
K N+L++ + +++DFGLA+ + H +V T Y +
Sbjct: 120 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-----TLWYRA 174
Query: 315 PEYFM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
PE + D+++ G + E++T RRA+
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 14/210 (6%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHP 201
+NF IG+G + VYK E E S + E+ ++ +NHP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 202 NAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXX 260
N KL+ TEN +LV +FL H L F L I + + LQ L
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKK--FMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 261 XXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLSPEY 317
K N+L++ + +++DFGLA+ + H +V T Y +PE
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-----TLWYRAPEI 175
Query: 318 FM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
+ D+++ G + E++T RRA+
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Query: 188 FLSELGIVAHINHPNAAKL---IGFSTENGFHLVLQFLPHGSLSSLLFGSTECL-----E 239
+SE+ ++ + HPN + I T ++V+++ G L+S++ T+ E
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 240 WTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWS 299
+ +R L +A + K +N+ L ++ DFGLA+ L + S
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS 171
Query: 300 HHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
F GT Y+SPE +EK+D+++ G LL EL
Sbjct: 172 FAKAFV--GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 188 FLSELGIVAHI-NHPNAAKLIGFSTENG--FHLVLQFLPHGSLSSLL------------- 231
+SEL I+ HI +H N L+G T+ G ++++F G+LS+ L
Sbjct: 78 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTP 137
Query: 232 ---FGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDF 288
+ LE I Y + +A+G+++L A NILLSE +I DF
Sbjct: 138 EDLYKDFLTLEHLICY--SFQVAKGMEFLASRKCIHRDLA---ARNILLSEKNVVKICDF 192
Query: 289 GLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
GLA+ + + +++PE + ++DV++FGVLL E+ +
Sbjct: 193 GLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 14/213 (6%)
Query: 139 AATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHI 198
+ +NF IG+G + VYK E E S + E+ ++ +
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 199 NHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYL 257
NHPN KL+ TEN +LV +FL S+ F L I + + LQ L
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 258 XXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLS 314
K N+L++ + +++DFGLA+ + H +V T Y +
Sbjct: 118 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-----TLWYRA 172
Query: 315 PEYFM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
PE + D+++ G + E++T RRA+
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 204
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 5/162 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
E ++ E +++ ++HP KL F + + L + +G L + E
Sbjct: 76 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET 135
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K NILL+ED QI+DFG AK L
Sbjct: 136 CTRFYTA-EIVSALEYLHGKGIIHRDL---KPENILLNEDMHIQITDFGTAKVLSPESKQ 191
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
GT Y+SPE + +D++A G ++ +L+ G
Sbjct: 192 ARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 25/174 (14%)
Query: 188 FLSELGIVAHI-NHPNAAKLIGFSTENG--FHLVLQFLPHGSLSSLL------------- 231
+SEL I+ HI +H N L+G T+ G ++++F G+LS+ L
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 232 ----FGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISD 287
+ LE I Y + +A+G+++L A NILLSE +I D
Sbjct: 137 PEDLYKDFLTLEHLICY--SFQVAKGMEFLASRKCIHRDLA---ARNILLSEKNVVKICD 191
Query: 288 FGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
FGLA+ + + +++PE + ++DV++FGVLL E+ +
Sbjct: 192 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 25/174 (14%)
Query: 188 FLSELGIVAHI-NHPNAAKLIGFSTENG--FHLVLQFLPHGSLSSLL------------- 231
+SEL I+ HI +H N L+G T+ G ++++F G+LS+ L
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 232 ----FGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISD 287
+ LE I Y + +A+G+++L A NILLSE +I D
Sbjct: 128 PEDLYKDFLTLEHLICY--SFQVAKGMEFLASRKCIHRDLA---ARNILLSEKNVVKICD 182
Query: 288 FGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
FGLA+ + + +++PE + ++DV++FGVLL E+ +
Sbjct: 183 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 14/213 (6%)
Query: 139 AATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHI 198
+ +NF IG+G + VYK E E S + E+ ++ +
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 199 NHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYL 257
NHPN KL+ TEN +LV +FL S+ F L I + + LQ L
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 258 XXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLS 314
K N+L++ + +++DFGLA+ + H +V T Y +
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-----TLWYRA 173
Query: 315 PEYFM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
PE + D+++ G + E++T RRA+
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 205
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 30/182 (16%)
Query: 182 EERISDFLSELGIVAHI-NHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLL-------- 231
E+ +SD +SE+ ++ I H N L+G T++G ++++ + G+L L
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGM 140
Query: 232 ---FGSTECLEWTIRYK----IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQ 284
+ E + +K +A G++YL A N+L++E+ +
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA---ARNVLVTENNVMK 197
Query: 285 ISDFGLAKWLPDNWSHHIVFPIEGTFG-----YLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
I+DFGLA+ + ++I + + T G +++PE + ++DV++FGVL+ E+
Sbjct: 198 IADFGLARDI-----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
Query: 340 IT 341
T
Sbjct: 253 FT 254
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 14/213 (6%)
Query: 139 AATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHI 198
+ +NF IG+G + VYK E E S + E+ ++ +
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 199 NHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYL 257
NHPN KL+ TEN +LV +FL S+ F L I + + LQ L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 258 XXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLS 314
K N+L++ + +++DFGLA+ + H +V T Y +
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-----TLWYRA 174
Query: 315 PEYFM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
PE + D+++ G + E++T RRA+
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 25/174 (14%)
Query: 188 FLSELGIVAHI-NHPNAAKLIGFSTENG--FHLVLQFLPHGSLSSLL------------- 231
+SEL I+ HI +H N L+G T+ G ++ +F G+LS+ L
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 232 ----FGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISD 287
+ LE I Y + +A+G+++L A NILLSE +I D
Sbjct: 128 PEDLYKDFLTLEHLICY--SFQVAKGMEFLASRKCIHRDLA---ARNILLSEKNVVKICD 182
Query: 288 FGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
FGLA+ + + + +++PE + ++DV++FGVLL E+ +
Sbjct: 183 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 9/160 (5%)
Query: 186 SDFLSELGIVAHINHPNAAKLIGFSTENG---FHLVLQFLPHGSLSSLLFGSTECLEWTI 242
S + E+ I+ + H + K G + G LV++++P GSL L + L +
Sbjct: 61 SGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLL 120
Query: 243 RYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI 302
+ A I EG+ YL A N+LL D +I DFGLAK +P+ ++
Sbjct: 121 LF--AQQICEGMAYLHSQHYIHRNLA---ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 175
Query: 303 VFPI-EGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
V + + +PE +DV++FGV L EL+T
Sbjct: 176 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNW-SHHIVFPIEG 308
IA+ Q L K +NI++S ++ DFG+A+ + D+ S + G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 309 TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
T YLSPE VD ++DV++ G +L E++TG
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 25/174 (14%)
Query: 188 FLSELGIVAHI-NHPNAAKLIGFSTENG--FHLVLQFLPHGSLSSLL------------- 231
+SEL I+ HI +H N L+G T+ G ++ +F G+LS+ L
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 232 ----FGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISD 287
+ LE I Y + +A+G+++L A NILLSE +I D
Sbjct: 128 PEDLYKDFLTLEHLICY--SFQVAKGMEFLASRKCIHRDLA---ARNILLSEKNVVKICD 182
Query: 288 FGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
FGLA+ + + + +++PE + ++DV++FGVLL E+ +
Sbjct: 183 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNW-SHHIVFPIEG 308
IA+ Q L K +NI++S ++ DFG+A+ + D+ S + G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 309 TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
T YLSPE VD ++DV++ G +L E++TG
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 33/178 (18%)
Query: 188 FLSELGIVAHI-NHPNAAKLIGFSTENG--FHLVLQFLPHGSLSSLL------------- 231
+SEL I+ HI +H N L+G T+ G ++++F G+LS+ L
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 136
Query: 232 ----FGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISD 287
+ LE I Y + +A+G+++L A NILLSE +I D
Sbjct: 137 PEDLYKDFLTLEHLICY--SFQVAKGMEFLASRKCIHRDLA---ARNILLSEKNVVKICD 191
Query: 288 FGLAKWL---PDNWSH-HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
FGLA+ + PD P++ +++PE + ++DV++FGVLL E+ +
Sbjct: 192 FGLARDIYKDPDXVRKGDARLPLK----WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 30/182 (16%)
Query: 182 EERISDFLSELGIVAHI-NHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLL-------- 231
E+ +SD +SE+ ++ I H N L+G T++G ++++++ G+L L
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 232 ---FGSTECLEWTIRYK----IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQ 284
+ E + +K +A G++YL A N+L++E+ +
Sbjct: 141 EXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA---ARNVLVTENNVMK 197
Query: 285 ISDFGLAKWLPDNWSHHIVFPIEGTFG-----YLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
I+DFGLA+ + ++I + T G +++PE + ++DV++FGVL+ E+
Sbjct: 198 IADFGLARDI-----NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
Query: 340 IT 341
T
Sbjct: 253 FT 254
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNW-SHHIVFPIEG 308
IA+ Q L K +NI++S ++ DFG+A+ + D+ S + G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 309 TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
T YLSPE VD ++DV++ G +L E++TG
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 9/160 (5%)
Query: 186 SDFLSELGIVAHINHPNAAKLIGFSTENG---FHLVLQFLPHGSLSSLLFGSTECLEWTI 242
S + E+ I+ + H + K G + G LV++++P GSL L + L +
Sbjct: 61 SGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLL 120
Query: 243 RYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI 302
+ A I EG+ YL A N+LL D +I DFGLAK +P+ ++
Sbjct: 121 LF--AQQICEGMAYLHAQHYIHRNLA---ARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 175
Query: 303 VFPI-EGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
V + + +PE +DV++FGV L EL+T
Sbjct: 176 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 30/182 (16%)
Query: 182 EERISDFLSELGIVAHI-NHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLL-------- 231
E+ +SD +SE+ ++ I H N L+G T++G ++++++ G+L L
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGM 140
Query: 232 ---FGSTECLEWTIRYK----IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQ 284
+ E + +K +A G++YL A N+L++E+ +
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA---ARNVLVTENNVMK 197
Query: 285 ISDFGLAKWLPDNWSHHIVFPIEGTFG-----YLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
I+DFGLA+ + ++I + T G +++PE + ++DV++FGVL+ E+
Sbjct: 198 IADFGLARDI-----NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
Query: 340 IT 341
T
Sbjct: 253 FT 254
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNW-SHHIVFPIEG 308
IA+ Q L K +NI++S ++ DFG+A+ + D+ S + G
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 309 TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
T YLSPE VD ++DV++ G +L E++TG
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 30/182 (16%)
Query: 182 EERISDFLSELGIVAHI-NHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLL-------- 231
E+ +SD +SE+ ++ I H N L+G T++G ++++ + G+L L
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGM 140
Query: 232 ---FGSTECLEWTIRYK----IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQ 284
+ E + +K +A G++YL A N+L++E+ +
Sbjct: 141 EYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA---ARNVLVTENNVMK 197
Query: 285 ISDFGLAKWLPDNWSHHIVFPIEGTFG-----YLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
I+DFGLA+ + ++I + + T G +++PE + ++DV++FGVL+ E+
Sbjct: 198 IADFGLARDI-----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
Query: 340 IT 341
T
Sbjct: 253 FT 254
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 80/165 (48%), Gaps = 23/165 (13%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFST-ENGFHLVLQFLPHGSLSSLL------FGSTECLE 239
+F+ E ++ +++H +L G T + ++ +++ +G L + L F + + LE
Sbjct: 45 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE 104
Query: 240 WTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKW-LPDNW 298
+ + E ++YL A N L+++ ++SDFGL+++ L D +
Sbjct: 105 ------MCKDVCEAMEYLESKQFLHRDLA---ARNCLVNDQGVVKVSDFGLSRYVLDDEY 155
Query: 299 SHHI--VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ + FP+ + PE M+ K+D++AFGVL+ E+ +
Sbjct: 156 TSSVGSKFPVRWS----PPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 13/160 (8%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKI 246
+ L+E ++ +++P ++IG + LV++ G L+ L + + I ++
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IEL 475
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH-----H 301
++ G++YL A N+LL + A+ISDFGL+K L + ++ H
Sbjct: 476 VHQVSMGMKYLEESNFVHRDLA---ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 532
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+P++ + +PE + K+DV++FGVL+ E +
Sbjct: 533 GKWPVK----WYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 23/165 (13%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFST-ENGFHLVLQFLPHGSLSSLL------FGSTECLE 239
+F+ E ++ +++H +L G T + ++ +++ +G L + L F + + LE
Sbjct: 65 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE 124
Query: 240 WTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWS 299
+ + E ++YL A N L+++ ++SDFGL++++ D+
Sbjct: 125 ------MCKDVCEAMEYLESKQFLHRDLA---ARNCLVNDQGVVKVSDFGLSRYVLDDEE 175
Query: 300 HHIV---FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
V FP+ + PE M+ K+D++AFGVL+ E+ +
Sbjct: 176 TSSVGSKFPVRWS----PPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 13/160 (8%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKI 246
+ L+E ++ +++P ++IG + LV++ G L+ L + + I ++
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IEL 132
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH-----H 301
++ G++YL A N+LL + A+ISDFGL+K L + ++ H
Sbjct: 133 VHQVSMGMKYLEESNFVHRDLA---ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 189
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+P++ + +PE + K+DV++FGVL+ E +
Sbjct: 190 GKWPVK----WYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 13/160 (8%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKI 246
+ L+E ++ +++P ++IG + LV++ G L+ L + + I ++
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IEL 132
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH-----H 301
++ G++YL A N+LL + A+ISDFGL+K L + ++ H
Sbjct: 133 VHQVSMGMKYLEESNFVHRDLA---ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 189
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+P++ + +PE + K+DV++FGVL+ E +
Sbjct: 190 GKWPVK----WYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 23/165 (13%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFST-ENGFHLVLQFLPHGSLSSLL------FGSTECLE 239
+F+ E ++ +++H +L G T + ++ +++ +G L + L F + + LE
Sbjct: 49 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE 108
Query: 240 WTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWS 299
+ + E ++YL A N L+++ ++SDFGL++++ D+
Sbjct: 109 ------MCKDVCEAMEYLESKQFLHRDLA---ARNCLVNDQGVVKVSDFGLSRYVLDDEY 159
Query: 300 HHIV---FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
V FP+ + PE M+ K+D++AFGVL+ E+ +
Sbjct: 160 TSSVGSKFPVRWS----PPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNW-SHHIVFPIEG 308
IA+ Q L K +NI++S ++ DFG+A+ + D+ S + G
Sbjct: 139 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 198
Query: 309 TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
T YLSPE VD ++DV++ G +L E++TG
Sbjct: 199 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 13/160 (8%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKI 246
+ L+E ++ +++P ++IG + LV++ G L+ L + + I ++
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IEL 122
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH-----H 301
++ G++YL A N+LL + A+ISDFGL+K L + ++ H
Sbjct: 123 VHQVSMGMKYLEESNFVHRDLA---ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 179
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+P++ + +PE + K+DV++FGVL+ E +
Sbjct: 180 GKWPVK----WYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 12/160 (7%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKI 246
+ + E I+ +++P +LIG LV++ G L L G E + + ++
Sbjct: 56 EMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAEL 115
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV--- 303
++ G++YL A N+LL + A+ISDFGL+K L + S++
Sbjct: 116 LHQVSMGMKYLEEKNFVHRDLA---ARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 172
Query: 304 --FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+P++ + +PE ++DV+++GV + E ++
Sbjct: 173 GKWPLK----WYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 13/160 (8%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKI 246
+ L+E ++ +++P ++IG + LV++ G L+ L + + I ++
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IEL 130
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH-----H 301
++ G++YL A N+LL + A+ISDFGL+K L + ++ H
Sbjct: 131 VHQVSMGMKYLEESNFVHRDLA---ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 187
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+P++ + +PE + K+DV++FGVL+ E +
Sbjct: 188 GKWPVK----WYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 13/160 (8%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKI 246
+ L+E ++ +++P ++IG + LV++ G L+ L + + I ++
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IEL 474
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH-----H 301
++ G++YL A N+LL + A+ISDFGL+K L + ++ H
Sbjct: 475 VHQVSMGMKYLEESNFVHRDLA---ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 531
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+P++ + +PE + K+DV++FGVL+ E +
Sbjct: 532 GKWPVK----WYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 98/240 (40%), Gaps = 17/240 (7%)
Query: 144 FNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNA 203
F IGKG EV+KG + + E E+ I D E+ +++ +
Sbjct: 25 FTKLERIGKGSFGEVFKG-IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYV 83
Query: 204 AKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXX 262
K G + + +++++L GS LL ++IA + E L+ L
Sbjct: 84 TKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP-----FDEFQIATMLKEILKGLDYLHS 138
Query: 263 XXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGI 322
KA+N+LLSE + +++DFG+A L D F GT +++PE
Sbjct: 139 EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF--VGTPFWMAPEVIQQSA 196
Query: 323 VDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPLLQ--------TSNFKELVDPRL 374
D K D+++ G+ +EL G V++ P T +FKE +D L
Sbjct: 197 YDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDACL 256
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 25/174 (14%)
Query: 188 FLSELGIVAHI-NHPNAAKLIGFSTENG--FHLVLQFLPHGSLSSLL------------- 231
+SEL I+ HI +H N L+G T+ G ++ +F G+LS+ L
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 232 ----FGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISD 287
+ LE I Y + +A+G+++L A NILLSE +I D
Sbjct: 128 PEDLYKDFLTLEHLICY--SFQVAKGMEFLASRKCIHRDLA---ARNILLSEKNVVKICD 182
Query: 288 FGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
FGLA+ + + +++PE + ++DV++FGVLL E+ +
Sbjct: 183 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 12/160 (7%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKI 246
+ + E I+ +++P +LIG LV++ G L L G E + + ++
Sbjct: 382 EMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAEL 441
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV--- 303
++ G++YL A N+LL + A+ISDFGL+K L + S++
Sbjct: 442 LHQVSMGMKYLEEKNFVHRNLA---ARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498
Query: 304 --FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+P++ + +PE ++DV+++GV + E ++
Sbjct: 499 GKWPLK----WYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 13/160 (8%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKI 246
+ L+E ++ +++P ++IG + LV++ G L+ L + + I ++
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IEL 116
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH-----H 301
++ G++YL A N+LL + A+ISDFGL+K L + ++ H
Sbjct: 117 VHQVSMGMKYLEESNFVHRDLA---ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 173
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+P++ + +PE + K+DV++FGVL+ E +
Sbjct: 174 GKWPVK----WYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 13/160 (8%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKI 246
+ L+E ++ +++P ++IG + LV++ G L+ L + + I ++
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IEL 110
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH-----H 301
++ G++YL A N+LL + A+ISDFGL+K L + ++ H
Sbjct: 111 VHQVSMGMKYLEESNFVHRDLA---ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 167
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+P++ + +PE + K+DV++FGVL+ E +
Sbjct: 168 GKWPVK----WYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 80/165 (48%), Gaps = 23/165 (13%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFST-ENGFHLVLQFLPHGSLSSLL------FGSTECLE 239
+F+ E ++ +++H +L G T + ++ +++ +G L + L F + + LE
Sbjct: 50 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE 109
Query: 240 WTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKW-LPDNW 298
+ + E ++YL A N L+++ ++SDFGL+++ L D +
Sbjct: 110 ------MCKDVCEAMEYLESKQFLHRDLA---ARNCLVNDQGVVKVSDFGLSRYVLDDEY 160
Query: 299 SHHI--VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ + FP+ + PE M+ K+D++AFGVL+ E+ +
Sbjct: 161 TSSVGSKFPVRWS----PPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 80/165 (48%), Gaps = 23/165 (13%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFST-ENGFHLVLQFLPHGSLSSLL------FGSTECLE 239
+F+ E ++ +++H +L G T + ++ +++ +G L + L F + + LE
Sbjct: 65 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE 124
Query: 240 WTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKW-LPDNW 298
+ + E ++YL A N L+++ ++SDFGL+++ L D +
Sbjct: 125 ------MCKDVCEAMEYLESKQFLHRDLA---ARNCLVNDQGVVKVSDFGLSRYVLDDEY 175
Query: 299 SHHI--VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ + FP+ + PE M+ K+D++AFGVL+ E+ +
Sbjct: 176 TSSVGSKFPVRWS----PPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 92/221 (41%), Gaps = 20/221 (9%)
Query: 128 SWKNFDFAELAAATDN---FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXEDEE 183
S K+ D AEL D F+ IG G VY + + E + E
Sbjct: 37 SLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE 96
Query: 184 RISDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTI 242
+ D + E+ + + HPN + G + E+ LV+++ GS S LL + L+
Sbjct: 97 KWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVE 155
Query: 243 RYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL-PDNWSHH 301
+ G +GL YL KA NILLSE ++ DFG A + P N
Sbjct: 156 IAAVTHGALQGLAYLHSHNMIHRDV---KAGNILLSEPGLVKLGDFGSASIMAPAN---- 208
Query: 302 IVFPIEGTFGYLSPEYFM---HGIVDEKTDVFAFGVLLLEL 339
GT +++PE + G D K DV++ G+ +EL
Sbjct: 209 ---XFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 80/165 (48%), Gaps = 23/165 (13%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFST-ENGFHLVLQFLPHGSLSSLL------FGSTECLE 239
+F+ E ++ +++H +L G T + ++ +++ +G L + L F + + LE
Sbjct: 56 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE 115
Query: 240 WTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKW-LPDNW 298
+ + E ++YL A N L+++ ++SDFGL+++ L D +
Sbjct: 116 ------MCKDVCEAMEYLESKQFLHRDLA---ARNCLVNDQGVVKVSDFGLSRYVLDDEY 166
Query: 299 SHHI--VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ + FP+ + PE M+ K+D++AFGVL+ E+ +
Sbjct: 167 TSSVGSKFPVRWS----PPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 13/160 (8%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKI 246
+ L+E ++ +++P ++IG + LV++ G L+ L + + I ++
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IEL 112
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH-----H 301
++ G++YL A N+LL + A+ISDFGL+K L + ++ H
Sbjct: 113 VHQVSMGMKYLEESNFVHRDLA---ARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 169
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+P++ + +PE + K+DV++FGVL+ E +
Sbjct: 170 GKWPVK----WYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 10/160 (6%)
Query: 188 FLSELGIVAHINHPNAAKL---IGFSTENGFHLVLQFLPHGSLSSLLFGSTECL-----E 239
+SE+ ++ + HPN + I T ++V+++ G L+S++ T+ E
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 240 WTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWS 299
+ +R L +A + K +N+ L ++ DFGLA+ L N
Sbjct: 112 FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHD 169
Query: 300 HHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
GT Y+SPE +EK+D+++ G LL EL
Sbjct: 170 EDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 93/230 (40%), Gaps = 24/230 (10%)
Query: 128 SWKNFDFAELAAATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISD 187
S D + L F L+G G + +VYKG ++EE I
Sbjct: 10 SLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQ 69
Query: 188 FLSELGIVAHINHPNAAKLIGF-------STENGFHLVLQFLPHGSLSSLLF---GSTEC 237
++ L +H H N A G ++ LV++F GS++ L+ G+T
Sbjct: 70 EINMLKKYSH--HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLK 127
Query: 238 LEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN 297
EW I Y I I GL +L K N+LL+E+ E ++ DFG++ L
Sbjct: 128 EEW-IAY-ICREILRGLSHLHQHKVIHRDI---KGQNVLLTENAEVKLVDFGVSAQLDRT 182
Query: 298 WSHHIVFPIEGTFGYLSPEYFM-----HGIVDEKTDVFAFGVLLLELITG 342
F GT +++PE D K+D+++ G+ +E+ G
Sbjct: 183 VGRRNTFI--GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 23/165 (13%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFST-ENGFHLVLQFLPHGSLSSLL------FGSTECLE 239
+F+ E ++ +++H +L G T + ++ +++ +G L + L F + + LE
Sbjct: 50 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE 109
Query: 240 WTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN-- 297
+ + E ++YL A N L+++ ++SDFGL++++ D+
Sbjct: 110 ------MCKDVCEAMEYLESKQFLHRDLA---ARNCLVNDQGVVKVSDFGLSRYVLDDEY 160
Query: 298 -WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
S FP+ + PE M+ K+D++AFGVL+ E+ +
Sbjct: 161 TSSRGSKFPVRWS----PPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 27/225 (12%)
Query: 136 ELAAATDNFNSENLIGKGGHAEVY----KGCLPD-GEXXXXXXXXXXXXEDEERISDFLS 190
E A + +G+G VY KG + D E ERI +FL+
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLN 62
Query: 191 ELGIVAHINHPNAAKLIGFSTENGFHLV-LQFLPHGSLSSLLFGSTECLE---------W 240
E ++ N + +L+G ++ LV ++ + G L S L +E
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+ ++A IA+G+ YL A N +++ED+ +I DFG+ + + +
Sbjct: 123 SKMIQMAGEIADGMAYLNANKFVHRDLA---ARNCMVAEDFTVKIGDFGMTRDIXETDXX 179
Query: 301 HI----VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P+ ++SPE G+ +DV++FGV+L E+ T
Sbjct: 180 RKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 95/225 (42%), Gaps = 27/225 (12%)
Query: 136 ELAAATDNFNSENLIGKGGHAEVY----KGCLPD-GEXXXXXXXXXXXXEDEERISDFLS 190
E A + +G+G VY KG + D E ERI +FL+
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLN 68
Query: 191 ELGIVAHINHPNAAKLIGFSTENGFHLV-LQFLPHGSLSSLLFGSTECLE---------W 240
E ++ N + +L+G ++ LV ++ + G L S L +E
Sbjct: 69 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 128
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+ ++A IA+G+ YL A N +++ED+ +I DFG+ + + + +
Sbjct: 129 SKMIQMAGEIADGMAYLNANKFVHRDLA---ARNCMVAEDFTVKIGDFGMTRDIYETDYY 185
Query: 301 HI----VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P+ ++SPE G+ +DV++FGV+L E+ T
Sbjct: 186 RKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 95/225 (42%), Gaps = 27/225 (12%)
Query: 136 ELAAATDNFNSENLIGKGGHAEVY----KGCLPD-GEXXXXXXXXXXXXEDEERISDFLS 190
E A + +G+G VY KG + D E ERI +FL+
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLN 70
Query: 191 ELGIVAHINHPNAAKLIGFSTENGFHLV-LQFLPHGSLSSLLFGSTECLE---------W 240
E ++ N + +L+G ++ LV ++ + G L S L +E
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+ ++A IA+G+ YL A N +++ED+ +I DFG+ + + + +
Sbjct: 131 SKMIQMAGEIADGMAYLNANKFVHRDLA---ARNCMVAEDFTVKIGDFGMTRDIYETDYY 187
Query: 301 HI----VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P+ ++SPE G+ +DV++FGV+L E+ T
Sbjct: 188 RKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 95/225 (42%), Gaps = 27/225 (12%)
Query: 136 ELAAATDNFNSENLIGKGGHAEVY----KGCLPD-GEXXXXXXXXXXXXEDEERISDFLS 190
E A + +G+G VY KG + D E ERI +FL+
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLN 64
Query: 191 ELGIVAHINHPNAAKLIGFSTENGFHLV-LQFLPHGSLSSLLFGSTECLE---------W 240
E ++ N + +L+G ++ LV ++ + G L S L +E
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+ ++A IA+G+ YL A N +++ED+ +I DFG+ + + + +
Sbjct: 125 SKMIQMAGEIADGMAYLNANKFVHRDLA---ARNCMVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 301 HI----VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P+ ++SPE G+ +DV++FGV+L E+ T
Sbjct: 182 RKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 95/225 (42%), Gaps = 27/225 (12%)
Query: 136 ELAAATDNFNSENLIGKGGHAEVY----KGCLPD-GEXXXXXXXXXXXXEDEERISDFLS 190
E A + +G+G VY KG + D E ERI +FL+
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLN 70
Query: 191 ELGIVAHINHPNAAKLIGFSTENGFHLV-LQFLPHGSLSSLLFGSTECLE---------W 240
E ++ N + +L+G ++ LV ++ + G L S L +E
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+ ++A IA+G+ YL A N +++ED+ +I DFG+ + + + +
Sbjct: 131 SKMIQMAGEIADGMAYLNANKFVHRDLA---ARNCMVAEDFTVKIGDFGMTRDIYETDYY 187
Query: 301 HI----VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P+ ++SPE G+ +DV++FGV+L E+ T
Sbjct: 188 RKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 95/225 (42%), Gaps = 27/225 (12%)
Query: 136 ELAAATDNFNSENLIGKGGHAEVY----KGCLPD-GEXXXXXXXXXXXXEDEERISDFLS 190
E A + +G+G VY KG + D E ERI +FL+
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLN 71
Query: 191 ELGIVAHINHPNAAKLIGFSTENGFHLV-LQFLPHGSLSSLLFGSTECLE---------W 240
E ++ N + +L+G ++ LV ++ + G L S L +E
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+ ++A IA+G+ YL A N +++ED+ +I DFG+ + + + +
Sbjct: 132 SKMIQMAGEIADGMAYLNANKFVHRDLA---ARNCMVAEDFTVKIGDFGMTRDIYETDYY 188
Query: 301 HI----VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P+ ++SPE G+ +DV++FGV+L E+ T
Sbjct: 189 RKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 27/225 (12%)
Query: 136 ELAAATDNFNSENLIGKGGHAEVY----KGCLPD-GEXXXXXXXXXXXXEDEERISDFLS 190
E A + +G+G VY KG + D E ERI +FL+
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLN 71
Query: 191 ELGIVAHINHPNAAKLIGFSTENGFHLV-LQFLPHGSLSSLLFGSTECLE---------W 240
E ++ N + +L+G ++ LV ++ + G L S L +E
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+ ++A IA+G+ YL A N +++ED+ +I DFG+ + + +
Sbjct: 132 SKMIQMAGEIADGMAYLNANKFVHRDLA---ARNCMVAEDFTVKIGDFGMTRDIXETDXX 188
Query: 301 HI----VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P+ ++SPE G+ +DV++FGV+L E+ T
Sbjct: 189 RKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 87/210 (41%), Gaps = 14/210 (6%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHP 201
+NF IG+G + VYK E E S + E+ ++ +NHP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 202 NAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXX 260
N KL+ TEN +LV + + H L + F L I + + LQ L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDLKT--FMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 261 XXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLSPEY 317
K N+L++ + +++DFGLA+ ++H +V T Y +PE
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-----TLWYRAPEI 173
Query: 318 FM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
+ D+++ G + E++T RRA+
Sbjct: 174 LLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 202
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKI 246
+ L+E ++ +++P ++IG + LV++ G L+ L + + I ++
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IEL 116
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH-----H 301
++ G++YL A N+LL + A+ISDFGL+K L + + H
Sbjct: 117 VHQVSMGMKYLEESNFVHRDLA---ARNVLLVTQHYAKISDFGLSKALRADENXYKAQTH 173
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+P++ + +PE + K+DV++FGVL+ E +
Sbjct: 174 GKWPVK----WYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 95/225 (42%), Gaps = 27/225 (12%)
Query: 136 ELAAATDNFNSENLIGKGGHAEVY----KGCLPD-GEXXXXXXXXXXXXEDEERISDFLS 190
E A + +G+G VY KG + D E ERI +FL+
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLN 77
Query: 191 ELGIVAHINHPNAAKLIGFSTENGFHLV-LQFLPHGSLSSLLFGSTECLE---------W 240
E ++ N + +L+G ++ LV ++ + G L S L +E
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 137
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+ ++A IA+G+ YL A N +++ED+ +I DFG+ + + + +
Sbjct: 138 SKMIQMAGEIADGMAYLNANKFVHRDLA---ARNCMVAEDFTVKIGDFGMTRDIYETDYY 194
Query: 301 HI----VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P+ ++SPE G+ +DV++FGV+L E+ T
Sbjct: 195 RKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 95/225 (42%), Gaps = 27/225 (12%)
Query: 136 ELAAATDNFNSENLIGKGGHAEVY----KGCLPD-GEXXXXXXXXXXXXEDEERISDFLS 190
E A + +G+G VY KG + D E ERI +FL+
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLN 99
Query: 191 ELGIVAHINHPNAAKLIGFSTENGFHLV-LQFLPHGSLSSLLFGSTECLE---------W 240
E ++ N + +L+G ++ LV ++ + G L S L +E
Sbjct: 100 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 159
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+ ++A IA+G+ YL A N +++ED+ +I DFG+ + + + +
Sbjct: 160 SKMIQMAGEIADGMAYLNANKFVHRDLA---ARNCMVAEDFTVKIGDFGMTRDIYETDYY 216
Query: 301 HI----VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P+ ++SPE G+ +DV++FGV+L E+ T
Sbjct: 217 RKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 70/172 (40%), Gaps = 19/172 (11%)
Query: 185 ISDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR 243
+ E+ I+ +NHPN KL TE +LV+++ G + L E R
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 116
Query: 244 YKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV 303
K I +QY KA N+LL D +I+DFG +S+
Sbjct: 117 AKFR-QIVSAVQYCHQKFIVHRDL---KAENLLLDADMNIKIADFG--------FSNEFT 164
Query: 304 F-----PIEGTFGYLSPEYFMHGIVD-EKTDVFAFGVLLLELITGRRAVDSR 349
F G+ Y +PE F D + DV++ GV+L L++G D +
Sbjct: 165 FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 27/225 (12%)
Query: 136 ELAAATDNFNSENLIGKGGHAEVY----KGCLPD-GEXXXXXXXXXXXXEDEERISDFLS 190
E A + +G+G VY KG + D E ERI +FL+
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLN 67
Query: 191 ELGIVAHINHPNAAKLIGFSTENGFHLV-LQFLPHGSLSSLLFGSTECL---------EW 240
E ++ N + +L+G ++ LV ++ + G L S L +
Sbjct: 68 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 127
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+ ++A IA+G+ YL A N +++ED+ +I DFG+ + + + +
Sbjct: 128 SKMIQMAGEIADGMAYLNANKFVHRDLA---ARNCMVAEDFTVKIGDFGMTRDIYETDYY 184
Query: 301 HI----VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P+ ++SPE G+ +DV++FGV+L E+ T
Sbjct: 185 RKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 70/172 (40%), Gaps = 19/172 (11%)
Query: 185 ISDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR 243
+ E+ I+ +NHPN KL TE +LV+++ G + L E R
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 116
Query: 244 YKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV 303
K I +QY KA N+LL D +I+DFG +S+
Sbjct: 117 AKFR-QIVSAVQYCHQKFIVHRDL---KAENLLLDADMNIKIADFG--------FSNEFT 164
Query: 304 F-----PIEGTFGYLSPEYFMHGIVD-EKTDVFAFGVLLLELITGRRAVDSR 349
F G+ Y +PE F D + DV++ GV+L L++G D +
Sbjct: 165 FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 70/172 (40%), Gaps = 19/172 (11%)
Query: 185 ISDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR 243
+ E+ I+ +NHPN KL TE +LV+++ G + L E R
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 116
Query: 244 YKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV 303
K I +QY KA N+LL D +I+DFG +S+
Sbjct: 117 AKFR-QIVSAVQYCHQKFIVHRDL---KAENLLLDADMNIKIADFG--------FSNEFT 164
Query: 304 F-----PIEGTFGYLSPEYFMHGIVD-EKTDVFAFGVLLLELITGRRAVDSR 349
F G+ Y +PE F D + DV++ GV+L L++G D +
Sbjct: 165 FGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 82/209 (39%), Gaps = 10/209 (4%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLS-ELGIVAHINH 200
D+F +GKG VY ++E + L E+ I AH++H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 201 PNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXX 259
PN +L F +L+L++ P G L L S E I +A+ L Y
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTA-TIMEELADALMYCHG 141
Query: 260 XXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFM 319
K N+LL E +I+DFG + P + GT YL PE
Sbjct: 142 KKVIHRDI---KPENLLLGLKGELKIADFGWSVHAPSLRRKTMC----GTLDYLPPEMIE 194
Query: 320 HGIVDEKTDVFAFGVLLLELITGRRAVDS 348
+ +EK D++ GVL EL+ G +S
Sbjct: 195 GRMHNEKVDLWCIGVLCYELLVGNPPFES 223
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 70/172 (40%), Gaps = 19/172 (11%)
Query: 185 ISDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR 243
+ E+ I+ +NHPN KL TE +LV+++ G + L E R
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 116
Query: 244 YKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV 303
K I +QY KA N+LL D +I+DFG +S+
Sbjct: 117 AKFR-QIVSAVQYCHQKFIVHRDL---KAENLLLDADMNIKIADFG--------FSNEFT 164
Query: 304 F-----PIEGTFGYLSPEYFMHGIVD-EKTDVFAFGVLLLELITGRRAVDSR 349
F G+ Y +PE F D + DV++ GV+L L++G D +
Sbjct: 165 FGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 69/178 (38%), Gaps = 31/178 (17%)
Query: 185 ISDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR 243
+ E+ I+ +NHPN KL TE +LV+++ G + L E R
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 116
Query: 244 YKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV 303
K I +QY KA N+LL D +I+DFG
Sbjct: 117 AKFR-QIVSAVQYCHQKFIVHRDL---KAENLLLDADMNIKIADFG-------------- 158
Query: 304 FPIEGTFG-----------YLSPEYFMHGIVD-EKTDVFAFGVLLLELITGRRAVDSR 349
F E TFG Y +PE F D + DV++ GV+L L++G D +
Sbjct: 159 FSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 27/225 (12%)
Query: 136 ELAAATDNFNSENLIGKGGHAEVY----KGCLPD-GEXXXXXXXXXXXXEDEERISDFLS 190
E A + +G+G VY KG + D E ERI +FL+
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLN 77
Query: 191 ELGIVAHINHPNAAKLIGFSTENGFHLV-LQFLPHGSLSSLLFGSTECL---------EW 240
E ++ N + +L+G ++ LV ++ + G L S L +
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 137
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+ ++A IA+G+ YL A N +++ED+ +I DFG+ + + + +
Sbjct: 138 SKMIQMAGEIADGMAYLNANKFVHRDLA---ARNCMVAEDFTVKIGDFGMTRDIYETDYY 194
Query: 301 HI----VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P+ ++SPE G+ +DV++FGV+L E+ T
Sbjct: 195 RKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 112/263 (42%), Gaps = 51/263 (19%)
Query: 188 FLSELGIVAHI-NHPNAAKLIGFSTENGFHLVL-QFLPHGSLSSLL-------------- 231
+SEL I++H+ H N L+G T G LV+ ++ +G L + L
Sbjct: 96 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNP 155
Query: 232 -FGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGL 290
E L + +A+G+ +L A N+LL+ + A+I DFGL
Sbjct: 156 SHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVA---ARNVLLTNGHVAKIGDFGL 212
Query: 291 AKWLPDNWSHHIV-----FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRA 345
A+ + ++ S++IV P++ +++PE + ++DV+++G+LL E+
Sbjct: 213 ARDIMND-SNYIVKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIF----- 262
Query: 346 VDSRRQSLVIWAKP-LLQTSNFKELVDPRLADAYDLAE----MKRAMLTASVCIHHLSTM 400
SL + P +L S F +LV D Y +A+ K C T
Sbjct: 263 ------SLGLNPYPGILVNSKFYKLVK----DGYQMAQPAFAPKNIYSIMQACWALEPTH 312
Query: 401 RPQMTRVLQLLRGEGGQTDLKPK 423
RP ++ L+ E Q D + +
Sbjct: 313 RPTFQQICSFLQ-EQAQEDRRER 334
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 89/216 (41%), Gaps = 20/216 (9%)
Query: 133 DFAELAAATDN---FNSENLIGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXEDEERISDF 188
D AEL D F+ IG G VY + + E + E+ D
Sbjct: 3 DVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDI 62
Query: 189 LSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIA 247
+ E+ + + HPN + G + E+ LV+++ GS S LL + L+ +
Sbjct: 63 IKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVT 121
Query: 248 LGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL-PDNWSHHIVFPI 306
G +GL YL KA NILLSE ++ DFG A + P N
Sbjct: 122 HGALQGLAYLHSHNMIHRDV---KAGNILLSEPGLVKLGDFGSASIMAPAN-------XF 171
Query: 307 EGTFGYLSPEYFM---HGIVDEKTDVFAFGVLLLEL 339
GT +++PE + G D K DV++ G+ +EL
Sbjct: 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 9/160 (5%)
Query: 186 SDFLSELGIVAHINHPNAAKLIGFSTENG---FHLVLQFLPHGSLSSLLFGSTECLEWTI 242
S + E+ I+ + H + K G + G LV++++P GSL L + L +
Sbjct: 78 SGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLL 137
Query: 243 RYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI 302
+ A I EG+ YL A N+LL D +I DFGLAK +P+ +
Sbjct: 138 LF--AQQICEGMAYLHAQHYIHRDLA---ARNVLLDNDRLVKIGDFGLAKAVPEGHEXYR 192
Query: 303 VFPI-EGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
V + + +PE +DV++FGV L EL+T
Sbjct: 193 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 88/223 (39%), Gaps = 19/223 (8%)
Query: 137 LAAATD------NFNSENLIGKGGHAEV--YKGCLPDGEXXXXXXXXXXXXEDEERISDF 188
+ +ATD N+ + IGKG A+V + L E + +
Sbjct: 4 ITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQL--NPTSLQKL 61
Query: 189 LSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIA 247
E+ I+ +NHPN KL TE +LV+++ G + L E R K
Sbjct: 62 FREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR 121
Query: 248 LGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE 307
I +QY KA N+LL D +I+DFG + + +
Sbjct: 122 -QIVSAVQYCHQKYIVHRDL---KAENLLLDGDMNIKIADFGFSNEFT---VGNKLDTFC 174
Query: 308 GTFGYLSPEYFMHGIVD-EKTDVFAFGVLLLELITGRRAVDSR 349
G+ Y +PE F D + DV++ GV+L L++G D +
Sbjct: 175 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 217
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 27/225 (12%)
Query: 136 ELAAATDNFNSENLIGKGGHAEVY----KGCLPD-GEXXXXXXXXXXXXEDEERISDFLS 190
E A + +G+G VY KG + D E ERI +FL+
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLN 64
Query: 191 ELGIVAHINHPNAAKLIGFSTENGFHLV-LQFLPHGSLSSLLFGSTECLE---------W 240
E ++ N + +L+G ++ LV ++ + G L S L +E
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+ ++A IA+G+ YL A N ++ED+ +I DFG+ + + + +
Sbjct: 125 SKMIQMAGEIADGMAYLNANKFVHRDLA---ARNCXVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 301 HI----VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ P+ ++SPE G+ +DV++FGV+L E+ T
Sbjct: 182 RKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 28/213 (13%)
Query: 147 ENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKL 206
E GK AE Y C P+ + D R DF E ++ ++ H + K
Sbjct: 23 EGAFGKVFLAECYNLC-PEQDKILVAVKTLKDASDNAR-KDFHREAELLTNLQHEHIVKF 80
Query: 207 IGFSTE-NGFHLVLQFLPHGSLSSLLFGS-------------TECLEWTIRYKIALGIAE 252
G E + +V +++ HG L+ L TE L + IA IA
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTE-LTQSQMLHIAQQIAA 139
Query: 253 GLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAK--WLPDNW--SHHIVFPIEG 308
G+ YL N L+ E+ +I DFG+++ + D + H + PI
Sbjct: 140 GMVYLASQHFVHRDLA---TRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR- 195
Query: 309 TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
++ PE M+ ++DV++ GV+L E+ T
Sbjct: 196 ---WMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 58/266 (21%)
Query: 188 FLSELGIVAHI-NHPNAAKLIGFSTENGFHLVL-QFLPHGSLSSLLFGSTEC-------- 237
+SEL I++H+ H N L+G T G LV+ ++ +G L + L E
Sbjct: 81 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAP 140
Query: 238 --------------LEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEA 283
LE + +A+G+ +L A N+LL+ + A
Sbjct: 141 GQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVA---ARNVLLTNGHVA 197
Query: 284 QISDFGLAKWLPDNWSHHIV-----FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLE 338
+I DFGLA+ + ++ S++IV P++ +++PE + ++DV+++G+LL E
Sbjct: 198 KIGDFGLARDIMND-SNYIVKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWE 252
Query: 339 LITGRRAVDSRRQSLVIWAKP-LLQTSNFKELVDPRLADAYDLAE----MKRAMLTASVC 393
+ SL + P +L S F +LV D Y +A+ K C
Sbjct: 253 IF-----------SLGLNPYPGILVNSKFYKLVK----DGYQMAQPAFAPKNIYSIMQAC 297
Query: 394 IHHLSTMRPQMTRVLQLLRGEGGQTD 419
T RP ++ L+ E Q D
Sbjct: 298 WALEPTHRPTFQQICSFLQ-EQAQED 322
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 108/267 (40%), Gaps = 31/267 (11%)
Query: 149 LIGKGGHAEVYKGCLPDGEX----XXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAA 204
+GKGG A+ Y+ D + +E++S +E+ I +++P+
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS---TEIAIHKSLDNPHVV 105
Query: 205 KLIGFSTENGF-HLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXX 263
GF ++ F ++VL+ SL L E RY + I +G+QYL
Sbjct: 106 GFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-QGVQYLHNNRVI 164
Query: 264 XXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIV 323
K N+ L++D + +I DFGLA + + + GT Y++PE
Sbjct: 165 HRDL---KLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCGTPNYIAPEVLCKKGH 219
Query: 324 DEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPLLQTSNFKELVDPRLADAYDLAEM 383
+ D+++ G +L L+ G KP +TS KE + Y +
Sbjct: 220 SFEVDIWSLGCILYTLLVG---------------KPPFETSCLKETYIRIKKNEYSVPRH 264
Query: 384 KRAMLTASV--CIHHLSTMRPQMTRVL 408
+ +A + +H T+RP + +L
Sbjct: 265 INPVASALIRRMLHADPTLRPSVAELL 291
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 68/167 (40%), Gaps = 9/167 (5%)
Query: 185 ISDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR 243
+ E+ I+ +NHPN KL TE +L++++ G + L E R
Sbjct: 55 LQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEAR 114
Query: 244 YKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV 303
K I +QY KA N+LL D +I+DFG + +
Sbjct: 115 SKFR-QIVSAVQYCHQKRIVHRDL---KAENLLLDADMNIKIADFGFSNEFTVGGK---L 167
Query: 304 FPIEGTFGYLSPEYFMHGIVD-EKTDVFAFGVLLLELITGRRAVDSR 349
G+ Y +PE F D + DV++ GV+L L++G D +
Sbjct: 168 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 214
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 83/205 (40%), Gaps = 12/205 (5%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHP 201
+ +N ++GKG EV K + + S L E+ ++ ++HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 202 NAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXX 260
N KL + F++V + G L + E +I + G+ Y+
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-RIIKQVFSGITYMHKH 140
Query: 261 XXXXXXXXXXKASNILLS---EDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEY 317
K NILL +D + +I DFGL+ N GT Y++PE
Sbjct: 141 NIVHRDL---KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI---GTAYYIAPE- 193
Query: 318 FMHGIVDEKTDVFAFGVLLLELITG 342
+ G DEK DV++ GV+L L++G
Sbjct: 194 VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 83/205 (40%), Gaps = 12/205 (5%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHP 201
+ +N ++GKG EV K + + S L E+ ++ ++HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 202 NAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXX 260
N KL + F++V + G L + E +I + G+ Y+
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-RIIKQVFSGITYMHKH 140
Query: 261 XXXXXXXXXXKASNILLS---EDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEY 317
K NILL +D + +I DFGL+ N GT Y++PE
Sbjct: 141 NIVHRDL---KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI---GTAYYIAPE- 193
Query: 318 FMHGIVDEKTDVFAFGVLLLELITG 342
+ G DEK DV++ GV+L L++G
Sbjct: 194 VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 83/205 (40%), Gaps = 12/205 (5%)
Query: 142 DNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHP 201
+ +N ++GKG EV K + + S L E+ ++ ++HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 202 NAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXX 260
N KL + F++V + G L + E +I + G+ Y+
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-RIIKQVFSGITYMHKH 140
Query: 261 XXXXXXXXXXKASNILLS---EDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEY 317
K NILL +D + +I DFGL+ N GT Y++PE
Sbjct: 141 NIVHRDL---KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI---GTAYYIAPE- 193
Query: 318 FMHGIVDEKTDVFAFGVLLLELITG 342
+ G DEK DV++ GV+L L++G
Sbjct: 194 VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 67/167 (40%), Gaps = 9/167 (5%)
Query: 185 ISDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR 243
+ E+ I+ +NHPN KL TE +L++++ G + L E R
Sbjct: 58 LQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEAR 117
Query: 244 YKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV 303
K I +QY KA N+LL D +I+DFG + +
Sbjct: 118 SKFR-QIVSAVQYCHQKRIVHRDL---KAENLLLDADMNIKIADFGFSNEFTVGGK---L 170
Query: 304 FPIEGTFGYLSPEYFMHGIVD-EKTDVFAFGVLLLELITGRRAVDSR 349
G Y +PE F D + DV++ GV+L L++G D +
Sbjct: 171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 217
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 108/267 (40%), Gaps = 31/267 (11%)
Query: 149 LIGKGGHAEVYKGCLPDGEX----XXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAA 204
+GKGG A+ Y+ D + +E++S +E+ I +++P+
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS---TEIAIHKSLDNPHVV 105
Query: 205 KLIGFSTENGF-HLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXX 263
GF ++ F ++VL+ SL L E RY + I +G+QYL
Sbjct: 106 GFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-QGVQYLHNNRVI 164
Query: 264 XXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIV 323
K N+ L++D + +I DFGLA + + + GT Y++PE
Sbjct: 165 HRDL---KLGNLFLNDDMDVKIGDFGLATKIEFDGERKKX--LCGTPNYIAPEVLCKKGH 219
Query: 324 DEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPLLQTSNFKELVDPRLADAYDLAEM 383
+ D+++ G +L L+ G KP +TS KE + Y +
Sbjct: 220 SFEVDIWSLGCILYTLLVG---------------KPPFETSCLKETYIRIKKNEYSVPRH 264
Query: 384 KRAMLTASV--CIHHLSTMRPQMTRVL 408
+ +A + +H T+RP + +L
Sbjct: 265 INPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 69/178 (38%), Gaps = 31/178 (17%)
Query: 185 ISDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR 243
+ E+ I+ +NHPN KL TE +LV+++ G + L E R
Sbjct: 50 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEAR 109
Query: 244 YKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV 303
K I +QY KA N+LL D +I+DFG
Sbjct: 110 AKFR-QIVSAVQYCHQKFIVHRDL---KAENLLLDADMNIKIADFG-------------- 151
Query: 304 FPIEGTFG-----------YLSPEYFMHGIVD-EKTDVFAFGVLLLELITGRRAVDSR 349
F E TFG Y +PE F D + DV++ GV+L L++G D +
Sbjct: 152 FSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 209
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 108/267 (40%), Gaps = 31/267 (11%)
Query: 149 LIGKGGHAEVYKGCLPDGEX----XXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAA 204
+GKGG A+ Y+ D + +E++S +E+ I +++P+
Sbjct: 33 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS---TEIAIHKSLDNPHVV 89
Query: 205 KLIGFSTENGF-HLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXX 263
GF ++ F ++VL+ SL L E RY + I +G+QYL
Sbjct: 90 GFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-QGVQYLHNNRVI 148
Query: 264 XXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIV 323
K N+ L++D + +I DFGLA + + + GT Y++PE
Sbjct: 149 HRDL---KLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCGTPNYIAPEVLCKKGH 203
Query: 324 DEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPLLQTSNFKELVDPRLADAYDLAEM 383
+ D+++ G +L L+ G KP +TS KE + Y +
Sbjct: 204 SFEVDIWSLGCILYTLLVG---------------KPPFETSCLKETYIRIKKNEYSVPRH 248
Query: 384 KRAMLTASV--CIHHLSTMRPQMTRVL 408
+ +A + +H T+RP + +L
Sbjct: 249 INPVASALIRRMLHADPTLRPSVAELL 275
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++P G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 21/202 (10%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIG- 208
+G+G + VYK G EDE S + E+ ++ ++HPN LI
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDA-EDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 209 FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR---YKIALGIAEGLQYLXXXXXXXX 265
+E LV +F+ L T + I+ Y++ G+A Q+
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH-------RI 140
Query: 266 XXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLSPEYFMHG- 321
K N+L++ D +++DFGLA+ +++H +V T Y +P+ M
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-----TLWYRAPDVLMGSK 195
Query: 322 IVDEKTDVFAFGVLLLELITGR 343
D+++ G + E+ITG+
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGK 217
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++P G + S L E
Sbjct: 76 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH 135
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 136 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 187
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 188 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 21/202 (10%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIG- 208
+G+G + VYK G EDE S + E+ ++ ++HPN LI
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDA-EDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 209 FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR---YKIALGIAEGLQYLXXXXXXXX 265
+E LV +F+ L T + I+ Y++ G+A Q+
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH-------RI 140
Query: 266 XXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLSPEYFMHG- 321
K N+L++ D +++DFGLA+ +++H +V T Y +P+ M
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-----TLWYRAPDVLMGSK 195
Query: 322 IVDEKTDVFAFGVLLLELITGR 343
D+++ G + E+ITG+
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGK 217
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++P G + S L E
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH 143
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 144 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 195
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 196 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 108/267 (40%), Gaps = 31/267 (11%)
Query: 149 LIGKGGHAEVYKGCLPDGEX----XXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAA 204
+GKGG A+ Y+ D + +E++S +E+ I +++P+
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMS---TEIAIHKSLDNPHVV 105
Query: 205 KLIGFSTENGF-HLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXX 263
GF ++ F ++VL+ SL L E RY + I +G+QYL
Sbjct: 106 GFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-QGVQYLHNNRVI 164
Query: 264 XXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIV 323
K N+ L++D + +I DFGLA + + + GT Y++PE
Sbjct: 165 HRDL---KLGNLFLNDDMDVKIGDFGLATKI--EFDGERKKDLCGTPNYIAPEVLCKKGH 219
Query: 324 DEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPLLQTSNFKELVDPRLADAYDLAEM 383
+ D+++ G +L L+ G KP +TS KE + Y +
Sbjct: 220 SFEVDIWSLGCILYTLLVG---------------KPPFETSCLKETYIRIKKNEYSVPRH 264
Query: 384 KRAMLTASV--CIHHLSTMRPQMTRVL 408
+ +A + +H T+RP + +L
Sbjct: 265 INPVASALIRRMLHADPTLRPSVAELL 291
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++P G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 19/228 (8%)
Query: 120 GSVPIVRHSWKNFDFAELAAATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXX 179
G+ +V W D + A +D F E+ +G+G + VY+ C G
Sbjct: 33 GTASLVPDYW--IDGSNRDALSDFFEVESELGRGATSIVYR-CKQKGTQKPYALKVLKKT 89
Query: 180 EDEERISDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECL 238
D++ + +E+G++ ++HPN KL F T LVL+ + G LF
Sbjct: 90 VDKKIVR---TEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGE----LFDRIVEK 142
Query: 239 EWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSE---DYEAQISDFGLAKWLP 295
+ A + + L+ + K N+L + D +I+DFGL+K +
Sbjct: 143 GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV- 201
Query: 296 DNWSHHIVF-PIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
H ++ + GT GY +PE + D+++ G++ L+ G
Sbjct: 202 ---EHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++P G + S L E
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 143
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPD-NWSH 300
R+ A I +YL K N+L+ + Q++DFG AK + W+
Sbjct: 144 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGRTWT- 198
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 199 -----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++P G + S L E
Sbjct: 69 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 128
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPD-NWSH 300
R+ A I +YL K N+L+ + Q++DFG AK + W+
Sbjct: 129 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGRTWT- 183
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 184 -----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++P G + S L E
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 143
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 144 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 195
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 196 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++P G + S L E
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 143
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 144 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 195
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 196 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 14/196 (7%)
Query: 150 IGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLI- 207
IG+G VY + G+ +E I ++E+ ++ +PN +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI---INEILVMRENKNPNIVNYLD 84
Query: 208 GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXX 267
+ + +V+++L GSL+ ++ + C++ +IA E LQ L
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVV--TETCMD---EGQIAAVCRECLQALEFLHSNQVIH 139
Query: 268 XXXKASNILLSEDYEAQISDFGL-AKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEK 326
K+ NILL D +++DFG A+ P+ + GT +++PE K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV---GTPYWMAPEVVTRKAYGPK 196
Query: 327 TDVFAFGVLLLELITG 342
D+++ G++ +E+I G
Sbjct: 197 VDIWSLGIMAIEMIEG 212
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++P G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++P G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 65/169 (38%), Gaps = 11/169 (6%)
Query: 185 ISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR 243
+ + EL I+ + HP L F E +V+ L G L L + E T++
Sbjct: 59 VRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVK 118
Query: 244 YKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV 303
L I E + L K NILL E I+DF +A LP +
Sbjct: 119 ----LFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ---I 171
Query: 304 FPIEGTFGYLSPEYFMH---GIVDEKTDVFAFGVLLLELITGRRAVDSR 349
+ GT Y++PE F D ++ GV EL+ GRR R
Sbjct: 172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIR 220
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++P G + S L E
Sbjct: 104 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 163
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 164 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 215
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 216 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++P G + S L E
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 143
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 144 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 195
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 196 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++P G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++P G + S L E
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 143
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 144 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 195
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 196 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 84/213 (39%), Gaps = 14/213 (6%)
Query: 139 AATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHI 198
+ +NF IG+G + VYK E E S + E+ ++ +
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 199 NHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYL 257
NHPN KL+ TEN +LV + H F L I + + LQ L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFE---HVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 258 XXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLS 314
K N+L++ + +++DFGLA+ + H +V T Y +
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-----TLWYRA 174
Query: 315 PEYFM-HGIVDEKTDVFAFGVLLLELITGRRAV 346
PE + D+++ G + E++T RRA+
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRAL 206
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 14/196 (7%)
Query: 150 IGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLI- 207
IG+G VY + G+ +E I ++E+ ++ +PN +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI---INEILVMRENKNPNIVNYLD 85
Query: 208 GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXX 267
+ + +V+++L GSL+ ++ + C++ +IA E LQ L
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVV--TETCMD---EGQIAAVCRECLQALEFLHSNQVIH 140
Query: 268 XXXKASNILLSEDYEAQISDFGL-AKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEK 326
K+ NILL D +++DFG A+ P+ + GT +++PE K
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV---GTPYWMAPEVVTRKAYGPK 197
Query: 327 TDVFAFGVLLLELITG 342
D+++ G++ +E+I G
Sbjct: 198 VDIWSLGIMAIEMIEG 213
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++P G + S L E
Sbjct: 76 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 135
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 136 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 187
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 188 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 67/178 (37%), Gaps = 31/178 (17%)
Query: 185 ISDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIR 243
+ E+ I +NHPN KL TE +LV ++ G + L E R
Sbjct: 57 LQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEAR 116
Query: 244 YKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV 303
K I +QY KA N+LL D +I+DFG
Sbjct: 117 AKFR-QIVSAVQYCHQKFIVHRDL---KAENLLLDADXNIKIADFG-------------- 158
Query: 304 FPIEGTFG-----------YLSPEYFMHGIVD-EKTDVFAFGVLLLELITGRRAVDSR 349
F E TFG Y +PE F D + DV++ GV+L L++G D +
Sbjct: 159 FSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 216
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 25/163 (15%)
Query: 190 SELGIVAHINHPNAAKLI-GFSTENGFHLVLQFLPHGSL------SSLLFGSTECLEWTI 242
+E I+ + HP LI F T +L+L++L G L + T C +
Sbjct: 70 AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLA 128
Query: 243 RYKIALGI--AEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAK-WLPDNWS 299
+ALG +G+ Y K NI+L+ +++DFGL K + D
Sbjct: 129 EISMALGHLHQKGIIY-----------RDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV 177
Query: 300 HHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
H GT Y++PE M + D ++ G L+ +++TG
Sbjct: 178 THTFC---GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 14/196 (7%)
Query: 150 IGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLI- 207
IG+G VY + G+ +E I ++E+ ++ +PN +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI---INEILVMRENKNPNIVNYLD 84
Query: 208 GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXX 267
+ + +V+++L GSL+ ++ + C++ +IA E LQ L
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVV--TETCMD---EGQIAAVCRECLQALEFLHSNQVIH 139
Query: 268 XXXKASNILLSEDYEAQISDFGL-AKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEK 326
K+ NILL D +++DFG A+ P+ + GT +++PE K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV---GTPYWMAPEVVTRKAYGPK 196
Query: 327 TDVFAFGVLLLELITG 342
D+++ G++ +E+I G
Sbjct: 197 VDIWSLGIMAIEMIEG 212
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 82/207 (39%), Gaps = 13/207 (6%)
Query: 141 TDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEER-ISDFLSELGIVAHIN 199
+DN++ + +GKG + V + C+ + R E I +
Sbjct: 28 SDNYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 86
Query: 200 HPNAAKLIGFSTENGFH-LVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLX 258
HPN +L E FH LV + G L F E+ + I + L+ +
Sbjct: 87 HPNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESIA 142
Query: 259 XXXXXXXXXXXXKASNILLSEDYEA---QISDFGLAKWLPDNWSHHIVFPIEGTFGYLSP 315
K N+LL+ + +++DFGLA + D+ + H GT GYLSP
Sbjct: 143 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSP 199
Query: 316 EYFMHGIVDEKTDVFAFGVLLLELITG 342
E + D++A GV+L L+ G
Sbjct: 200 EVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++P G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 14/196 (7%)
Query: 150 IGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLI- 207
IG+G VY + G+ +E I ++E+ ++ +PN +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI---INEILVMRENKNPNIVNYLD 85
Query: 208 GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXX 267
+ + +V+++L GSL+ ++ + C++ +IA E LQ L
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVV--TETCMD---EGQIAAVCRECLQALEFLHSNQVIH 140
Query: 268 XXXKASNILLSEDYEAQISDFGL-AKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEK 326
K+ NILL D +++DFG A+ P+ + GT +++PE K
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV---GTPYWMAPEVVTRKAYGPK 197
Query: 327 TDVFAFGVLLLELITG 342
D+++ G++ +E+I G
Sbjct: 198 VDIWSLGIMAIEMIEG 213
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++P G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++P G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 83/195 (42%), Gaps = 12/195 (6%)
Query: 150 IGKGGHAEVYKGC-LPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLI- 207
IG+G VY + G+ +E I ++E+ ++ +PN +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI---INEILVMRENKNPNIVNYLD 84
Query: 208 GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXX 267
+ + +V+++L GSL+ ++ + C++ +IA E LQ L
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVV--TETCMD---EGQIAAVCRECLQALEFLHSNQVIH 139
Query: 268 XXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKT 327
K+ NILL D +++DFG + S + GT +++PE K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SEMVGTPYWMAPEVVTRKAYGPKV 197
Query: 328 DVFAFGVLLLELITG 342
D+++ G++ +E+I G
Sbjct: 198 DIWSLGIMAIEMIEG 212
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 23/162 (14%)
Query: 190 SELGIVAHINHPNAAKLI-GFSTENGFHLVLQFLPHGSL------SSLLFGSTECLEWTI 242
+E I+ + HP LI F T +L+L++L G L + T C +
Sbjct: 70 AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLA 128
Query: 243 RYKIALGI--AEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+ALG +G+ Y K NI+L+ +++DFGL K + +
Sbjct: 129 EISMALGHLHQKGIIY-----------RDLKPENIMLNHQGHVKLTDFGLCKESIHDGT- 176
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ GT Y++PE M + D ++ G L+ +++TG
Sbjct: 177 -VTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 102/263 (38%), Gaps = 18/263 (6%)
Query: 114 DDADDGGSVPIVRHSWKNFDFAELA--AATDNFNSENLIGKGGHAEVY-----KGCLPDG 166
D D G + V+H + + A +NF ++G G + +V+ G
Sbjct: 24 DGGDGGEQLLTVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGK 83
Query: 167 EXXXXXXXXXXXXEDEERISDFLSELGIVAHINH-PNAAKL-IGFSTENGFHLVLQFLPH 224
+ + +E ++ HI P L F TE HL+L ++
Sbjct: 84 LYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYING 143
Query: 225 GSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQ 284
G L F E +++ + + E + L K NILL +
Sbjct: 144 GEL----FTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVV 199
Query: 285 ISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIV--DEKTDVFAFGVLLLELITG 342
++DFGL+K + + + GT Y++P+ G D+ D ++ GVL+ EL+TG
Sbjct: 200 LTDFGLSKEFVADETER-AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
Query: 343 RR--AVDSRRQSLVIWAKPLLQT 363
VD + S ++ +L++
Sbjct: 259 ASPFTVDGEKNSQAEISRRILKS 281
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 125
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 182 YV-----ATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 83/210 (39%), Gaps = 18/210 (8%)
Query: 141 TDNFNSENLIGKGGHAEVYKGCL--PDGEXXXXX--XXXXXXXEDEERISDFLSELGIVA 196
TD + +GKG + V + C+ P G+ D +++ E I
Sbjct: 3 TDEYQLFEELGKGAFS-VVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE---REARICR 58
Query: 197 HINHPNAAKLIGFSTENGFH-LVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQ 255
+ HPN +L +E GFH LV + G L F E+ + I + L+
Sbjct: 59 LLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQILE 114
Query: 256 YLXXXXXXXXXXXXXKASNILL---SEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGY 312
+ K N+LL S+ +++DFGLA + F GT GY
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGY 172
Query: 313 LSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
LSPE + D++A GV+L L+ G
Sbjct: 173 LSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 97/236 (41%), Gaps = 33/236 (13%)
Query: 130 KNFDFAELAAATDNFNSENLIGKGGHAEVYKGCL---PDGEXXXXXXXXXXXXEDEERI- 185
K E++ + F E +G+ +VYKG L GE + E +
Sbjct: 16 KQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR 73
Query: 186 SDFLSELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLF--------GSTE 236
+F E + A + HPN L+G T++ ++ + HG L L GST+
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 133
Query: 237 -------CLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFG 289
LE + IA G++YL N+L+ + +ISD G
Sbjct: 134 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLA---TRNVLVYDKLNVKISDLG 190
Query: 290 LAK--WLPDNWS--HHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
L + + D + + + PI +++PE M+G +D++++GV+L E+ +
Sbjct: 191 LFREVYAADYYKLLGNSLLPIR----WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 82/207 (39%), Gaps = 13/207 (6%)
Query: 141 TDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEER-ISDFLSELGIVAHIN 199
+DN++ + +GKG + V + C+ + R E I +
Sbjct: 5 SDNYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 200 HPNAAKLIGFSTENGFH-LVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLX 258
HPN +L E FH LV + G L F E+ + I + L+ +
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESIA 119
Query: 259 XXXXXXXXXXXXKASNILLSEDYEA---QISDFGLAKWLPDNWSHHIVFPIEGTFGYLSP 315
K N+LL+ + +++DFGLA + D+ + H GT GYLSP
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSP 176
Query: 316 EYFMHGIVDEKTDVFAFGVLLLELITG 342
E + D++A GV+L L+ G
Sbjct: 177 EVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
+ I L+E I+ +N P KL F + ++V+++ P G + S L E
Sbjct: 83 KEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+++ + Q++DFGLAK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLMIDQQGYIQVTDFGLAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 82/207 (39%), Gaps = 13/207 (6%)
Query: 141 TDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEER-ISDFLSELGIVAHIN 199
+DN++ + +GKG + V + C+ + R E I +
Sbjct: 4 SDNYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 62
Query: 200 HPNAAKLIGFSTENGFH-LVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLX 258
HPN +L E FH LV + G L F E+ + I + L+ +
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESIA 118
Query: 259 XXXXXXXXXXXXKASNILLSEDYEA---QISDFGLAKWLPDNWSHHIVFPIEGTFGYLSP 315
K N+LL+ + +++DFGLA + D+ + H GT GYLSP
Sbjct: 119 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSP 175
Query: 316 EYFMHGIVDEKTDVFAFGVLLLELITG 342
E + D++A GV+L L+ G
Sbjct: 176 EVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 84/212 (39%), Gaps = 18/212 (8%)
Query: 139 AATDNFNSENLIGKGGHAEVYKGCL--PDGEXXXXX--XXXXXXXEDEERISDFLSELGI 194
+ TD + +GKG + V + C+ P G+ D +++ E I
Sbjct: 1 SMTDEYQLFEELGKGAFS-VVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE---REARI 56
Query: 195 VAHINHPNAAKLIGFSTENGFH-LVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEG 253
+ HPN +L +E GFH LV + G L F E+ + I +
Sbjct: 57 CRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQI 112
Query: 254 LQYLXXXXXXXXXXXXXKASNILL---SEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTF 310
L+ + K N+LL S+ +++DFGLA + F GT
Sbjct: 113 LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA--IEVQGDQQAWFGFAGTP 170
Query: 311 GYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
GYLSPE + D++A GV+L L+ G
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 189 LSELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLLFGSTECLEWTIRYKIA 247
+ EL A ++ P L G E + ++ ++ L GSL L+ CL R
Sbjct: 98 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-KQMGCLP-EDRALYY 155
Query: 248 LGIA-EGLQYLXXXXXXXXXXXXXKASNILLSED-YEAQISDFGLAKWL-PDNWSHHIVF 304
LG A EGL+YL KA N+LLS D A + DFG A L PD ++
Sbjct: 156 LGQALEGLEYLHTRRILHGDV---KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 212
Query: 305 P--IEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
I GT +++PE M D K D+++ ++L ++ G
Sbjct: 213 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++P G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + +++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIKVADFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 37/182 (20%)
Query: 189 LSELGIVAHI-NHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECL-EWTIRYK 245
+SEL ++ + +H N L+G T +G +L+ ++ +G L + L E E I Y+
Sbjct: 96 MSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYE 155
Query: 246 ---------------------IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQ 284
A +A+G+++L A N+L++ +
Sbjct: 156 NQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLA---ARNVLVTHGKVVK 212
Query: 285 ISDFGLAKWLPDNWSHHIV-----FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLEL 339
I DFGLA+ + + S+++V P++ +++PE GI K+DV+++G+LL E+
Sbjct: 213 ICDFGLARDIMSD-SNYVVRGNARLPVK----WMAPESLFEGIYTIKSDVWSYGILLWEI 267
Query: 340 IT 341
+
Sbjct: 268 FS 269
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++P G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + +++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIKVADFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 82/207 (39%), Gaps = 13/207 (6%)
Query: 141 TDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEER-ISDFLSELGIVAHIN 199
+DN++ + +GKG + V + C+ + R E I +
Sbjct: 5 SDNYDVKEELGKGAFS-VVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 200 HPNAAKLIGFSTENGFH-LVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLX 258
HPN +L E FH LV + G L F E+ + I + L+ +
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESIA 119
Query: 259 XXXXXXXXXXXXKASNILLSEDYEA---QISDFGLAKWLPDNWSHHIVFPIEGTFGYLSP 315
K N+LL+ + +++DFGLA + D+ + H GT GYLSP
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSP 176
Query: 316 EYFMHGIVDEKTDVFAFGVLLLELITG 342
E + D++A GV+L L+ G
Sbjct: 177 EVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 189 LSELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLLFGSTECLEWTIRYKIA 247
+ EL A ++ P L G E + ++ ++ L GSL L+ CL R
Sbjct: 114 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-KQMGCLP-EDRALYY 171
Query: 248 LGIA-EGLQYLXXXXXXXXXXXXXKASNILLSED-YEAQISDFGLAKWL-PDNWSHHIVF 304
LG A EGL+YL KA N+LLS D A + DFG A L PD ++
Sbjct: 172 LGQALEGLEYLHTRRILHGDV---KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 228
Query: 305 P--IEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
I GT +++PE M D K D+++ ++L ++ G
Sbjct: 229 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 33/230 (14%)
Query: 136 ELAAATDNFNSENLIGKGGHAEVYKGCL---PDGEXXXXXXXXXXXXEDEERI-SDFLSE 191
E++ + F E +G+ +VYKG L GE + E + +F E
Sbjct: 5 EISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHE 62
Query: 192 LGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLF--------GSTE------ 236
+ A + HPN L+G T++ ++ + HG L L GST+
Sbjct: 63 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 122
Query: 237 -CLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAK--W 293
LE + IA G++YL N+L+ + +ISD GL + +
Sbjct: 123 SALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLA---TRNVLVYDKLNVKISDLGLFREVY 179
Query: 294 LPDNWS--HHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
D + + + PI +++PE M+G +D++++GV+L E+ +
Sbjct: 180 AADYYKLLGNSLLPIR----WMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 189 LSELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLLFGSTECLEWTIRYKIA 247
+ EL A ++ P L G E + ++ ++ L GSL L+ CL R
Sbjct: 112 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-KQMGCLP-EDRALYY 169
Query: 248 LGIA-EGLQYLXXXXXXXXXXXXXKASNILLSED-YEAQISDFGLAKWL-PDNWSHHIVF 304
LG A EGL+YL KA N+LLS D A + DFG A L PD ++
Sbjct: 170 LGQALEGLEYLHTRRILHGDV---KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 226
Query: 305 P--IEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
I GT +++PE M D K D+++ ++L ++ G
Sbjct: 227 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 150 IGKGGHAEVYKGCLPD-----GEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAA 204
+G+G VY+G D E ERI +FL+E ++ +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHHVV 83
Query: 205 KLIGFSTENGFHLV-LQFLPHGSLSSLLFG-----------STECLEWTIRYKIALGIAE 252
+L+G ++ LV ++ + HG L S L L+ I ++A IA+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI--QMAAEIAD 141
Query: 253 GLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI----VFPIEG 308
G+ YL A N +++ D+ +I DFG+ + + + + + P+
Sbjct: 142 GMAYLNAKKFVHRDLA---ARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR- 197
Query: 309 TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+++PE G+ +D+++FGV+L E+ +
Sbjct: 198 ---WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++P G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + +++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIKVADFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V+++ P G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+++ + Q++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLMIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 132
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 133 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTADEMTG 188
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 189 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 113/287 (39%), Gaps = 48/287 (16%)
Query: 150 IGKGGHAEVYKGCLPD-----GEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAA 204
+G+G VY+G D E ERI +FL+E ++ +
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHHVV 84
Query: 205 KLIGFSTENGFHLV-LQFLPHGSLSSLLFG-----------STECLEWTIRYKIALGIAE 252
+L+G ++ LV ++ + HG L S L L+ I ++A IA+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI--QMAAEIAD 142
Query: 253 GLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI----VFPIEG 308
G+ YL A N +++ D+ +I DFG+ + + + + + P+
Sbjct: 143 GMAYLNAKKFVHRNLA---ARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR- 198
Query: 309 TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPLLQTSN--- 365
+++PE G+ +D+++FGV+L E+ + + +P SN
Sbjct: 199 ---WMAPESLKDGVFTTSSDMWSFGVVLWEITS-------------LAEQPYQGLSNEQV 242
Query: 366 FKELVDPRLADAYDLAEMKRAMLTASVCIHHLSTMRPQMTRVLQLLR 412
K ++D D D +R +C MRP ++ LL+
Sbjct: 243 LKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 132
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 133 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTADEMTG 188
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 189 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 150 IGKGGHAEVYKGCLPD-----GEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAA 204
+G+G VY+G D E ERI +FL+E ++ +
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHHVV 82
Query: 205 KLIGFSTENGFHLV-LQFLPHGSLSSLLFG-----------STECLEWTIRYKIALGIAE 252
+L+G ++ LV ++ + HG L S L L+ I ++A IA+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI--QMAAEIAD 140
Query: 253 GLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI----VFPIEG 308
G+ YL A N +++ D+ +I DFG+ + + + + + P+
Sbjct: 141 GMAYLNAKKFVHRDLA---ARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR- 196
Query: 309 TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+++PE G+ +D+++FGV+L E+ +
Sbjct: 197 ---WMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
Query: 200 HPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKI--ALGIAEGLQY 256
HP + F T+ V+++L G L ++ C ++ + A I GLQ+
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEIILGLQF 134
Query: 257 LXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAK--WLPDNWSHHIVFPIEGTFGYLS 314
L K NILL +D +I+DFG+ K L D ++ GT Y++
Sbjct: 135 LHSKGIVYRDL---KLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC----GTPDYIA 187
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELITGR 343
PE + + D ++FGVLL E++ G+
Sbjct: 188 PEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 132
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 133 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTADEMTG 188
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 189 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 113/287 (39%), Gaps = 48/287 (16%)
Query: 150 IGKGGHAEVYKGCLPD-----GEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAA 204
+G+G VY+G D E ERI +FL+E ++ +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHHVV 83
Query: 205 KLIGFSTENGFHLV-LQFLPHGSLSSLLFG-----------STECLEWTIRYKIALGIAE 252
+L+G ++ LV ++ + HG L S L L+ I ++A IA+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI--QMAAEIAD 141
Query: 253 GLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI----VFPIEG 308
G+ YL A N +++ D+ +I DFG+ + + + + + P+
Sbjct: 142 GMAYLNAKKFVHRNLA---ARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR- 197
Query: 309 TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPLLQTSN--- 365
+++PE G+ +D+++FGV+L E+ + + +P SN
Sbjct: 198 ---WMAPESLKDGVFTTSSDMWSFGVVLWEITS-------------LAEQPYQGLSNEQV 241
Query: 366 FKELVDPRLADAYDLAEMKRAMLTASVCIHHLSTMRPQMTRVLQLLR 412
K ++D D D +R +C MRP ++ LL+
Sbjct: 242 LKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 125
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 182 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 85/221 (38%), Gaps = 15/221 (6%)
Query: 130 KNFDFAELAAAT---DNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERIS 186
+N F +A T D++ +GKG + V + C+ + R
Sbjct: 16 ENLYFQXMATCTRFTDDYQLFEELGKGAFS-VVRRCVKKTPTQEYAAKIINTKKLSARDH 74
Query: 187 DFLS-ELGIVAHINHPNAAKLIGFSTENGFH-LVLQFLPHGSLSSLLFGSTECLEWTIRY 244
L E I + HPN +L +E GFH LV + G L F E+
Sbjct: 75 QKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEA 130
Query: 245 KIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEA---QISDFGLAKWLPDNWSHH 301
+ I + L+ + K N+LL+ + +++DFGLA +
Sbjct: 131 DASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGEQQ 188
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
F GT GYLSPE + D++A GV+L L+ G
Sbjct: 189 AWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 125
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 182 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 130
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 131 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDXELKILDFGLARHTDDEMTG 186
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 187 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 130
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 131 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDXELKILDFGLARHTDDEMTG 186
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 187 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 125
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 182 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
Query: 200 HPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKI--ALGIAEGLQY 256
HP + F T+ V+++L G L ++ C ++ + A I GLQ+
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEIILGLQF 133
Query: 257 LXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAK--WLPDNWSHHIVFPIEGTFGYLS 314
L K NILL +D +I+DFG+ K L D ++ GT Y++
Sbjct: 134 LHSKGIVYRDL---KLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC----GTPDYIA 186
Query: 315 PEYFMHGIVDEKTDVFAFGVLLLELITGR 343
PE + + D ++FGVLL E++ G+
Sbjct: 187 PEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 136
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 137 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDXELKILDFGLARHTDDEMTG 192
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 193 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 127
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 128 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 183
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 184 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 137
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 138 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 193
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 194 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 137
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 138 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 193
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 194 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 137
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 138 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 193
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 194 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 125
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 182 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCAKLTDD 121
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 122 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 177
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 178 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 130
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 131 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 186
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 187 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 70 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 124
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 125 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 180
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 181 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 125
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 182 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 125
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 182 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++ G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 89/213 (41%), Gaps = 31/213 (14%)
Query: 150 IGKGGHAEVYKGCLPD-----GEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAA 204
+G+G VY+G D E ERI +FL+E ++ +
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHHVV 80
Query: 205 KLIGFSTENGFHLV-LQFLPHGSLSSLLFG-----------STECLEWTIRYKIALGIAE 252
+L+G ++ LV ++ + HG L S L L+ I ++A IA+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI--QMAAEIAD 138
Query: 253 GLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI----VFPIEG 308
G+ YL A N +++ D+ +I DFG+ + + + + P+
Sbjct: 139 GMAYLNAKKFVHRDLA---ARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR- 194
Query: 309 TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+++PE G+ +D+++FGV+L E+ +
Sbjct: 195 ---WMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 132
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 133 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 188
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 189 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 144
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 145 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 200
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 201 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 136
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 137 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 192
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 193 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 81 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 135
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 136 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 191
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 192 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 125
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 182 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++ G + S L E
Sbjct: 70 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 129
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ E Q++DFG AK +
Sbjct: 130 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDEQGYIQVTDFGFAKRVKGR---- 181
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 182 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 144
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 145 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 200
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 201 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++ G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 127
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 128 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 183
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 184 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 127
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 128 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 183
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 184 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 145
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 146 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 201
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 202 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 131
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 132 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 187
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 188 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 67/159 (42%), Gaps = 7/159 (4%)
Query: 191 ELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I + H + GF +N F +VL+ SL L E RY +
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-Q 149
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I G QYL K N+ L+ED E +I DFGLA + + V + GT
Sbjct: 150 IVLGCQYLHRNRVIHRDL---KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGT 204
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDS 348
Y++PE + DV++ G ++ L+ G+ ++
Sbjct: 205 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 243
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 130
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 131 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 186
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 187 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 148
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 149 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 204
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 205 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 150 IGKGGHAEVYKGCLPD-----GEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAA 204
+G+G VY+G D E ERI +FL+E ++ +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHHVV 83
Query: 205 KLIGFSTENGFHLV-LQFLPHGSLSSLLFG-----------STECLEWTIRYKIALGIAE 252
+L+G ++ LV ++ + HG L S L L+ I ++A IA+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI--QMAAEIAD 141
Query: 253 GLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI----VFPIEG 308
G+ YL A N +++ D+ +I DFG+ + + + + + P+
Sbjct: 142 GMAYLNAKKFVHRDLA---ARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR- 197
Query: 309 TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+++PE G+ +D+++FGV+L E+ +
Sbjct: 198 ---WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 122
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 123 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 178
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 179 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K N+LL +D +ISD GLA L + + GT G+++PE + D D F
Sbjct: 316 KPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AGTPGFMAPELLLGEEYDFSVDYF 373
Query: 331 AFGVLLLELITGRRAVDSR 349
A GV L E+I R +R
Sbjct: 374 ALGVTLYEMIAARGPFRAR 392
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K NILL + +ISD GLA +P+ + GT GY++PE + D +
Sbjct: 313 KPENILLDDHGHIRISDLGLAVHVPEG---QTIKGRVGTVGYMAPEVVKNERYTFSPDWW 369
Query: 331 AFGVLLLELITGRRAVDSRRQSL 353
A G LL E+I G+ R++ +
Sbjct: 370 ALGCLLYEMIAGQSPFQQRKKKI 392
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 125
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 182 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 145
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 146 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 201
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 202 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWTIR 243
EL ++ H+ H N L+ T N +LV + G+ + + S + + ++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKSQKLTDDHVQ 128
Query: 244 YKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV 303
+ I I GL+Y+ K SN+ ++ED E +I DFGL + D + ++
Sbjct: 129 FLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDSELKILDFGLCRHTDDEMTGYV- 183
Query: 304 FPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 184 ----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K N+LL +D +ISD GLA L + + GT G+++PE + D D F
Sbjct: 316 KPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AGTPGFMAPELLLGEEYDFSVDYF 373
Query: 331 AFGVLLLELITGRRAVDSR 349
A GV L E+I R +R
Sbjct: 374 ALGVTLYEMIAARGPFRAR 392
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 67/159 (42%), Gaps = 7/159 (4%)
Query: 191 ELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I + H + GF +N F +VL+ SL L E RY +
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-Q 147
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I G QYL K N+ L+ED E +I DFGLA + + V + GT
Sbjct: 148 IVLGCQYLHRNRVIHRDL---KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGT 202
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDS 348
Y++PE + DV++ G ++ L+ G+ ++
Sbjct: 203 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 241
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++ G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 127
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 128 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDSELKILDFGLARHTDDEMTG 183
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 184 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWTIR 243
EL ++ H+ H N L+ T N +LV + G+ + + + + ++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQ 128
Query: 244 YKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV 303
+ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D + ++
Sbjct: 129 FLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDXELKILDFGLARHTDDEMTGYV- 183
Query: 304 FPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 184 ----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 112/287 (39%), Gaps = 48/287 (16%)
Query: 150 IGKGGHAEVYKGCLPD-----GEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAA 204
+G+G VY+G D E ERI +FL+E ++ +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHHVV 83
Query: 205 KLIGFSTENGFHLV-LQFLPHGSLSSLLFG-----------STECLEWTIRYKIALGIAE 252
+L+G ++ LV ++ + HG L S L L+ I ++A IA+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI--QMAAEIAD 141
Query: 253 GLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI----VFPIEG 308
G+ YL A N +++ D+ +I DFG+ + + + + P+
Sbjct: 142 GMAYLNAKKFVHRDLA---ARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR- 197
Query: 309 TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPLLQTSN--- 365
+++PE G+ +D+++FGV+L E+ + + +P SN
Sbjct: 198 ---WMAPESLKDGVFTTSSDMWSFGVVLWEITS-------------LAEQPYQGLSNEQV 241
Query: 366 FKELVDPRLADAYDLAEMKRAMLTASVCIHHLSTMRPQMTRVLQLLR 412
K ++D D D +R +C MRP ++ LL+
Sbjct: 242 LKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K NILL + +ISD GLA +P+ + GT GY++PE + D +
Sbjct: 313 KPENILLDDHGHIRISDLGLAVHVPEG---QTIKGRVGTVGYMAPEVVKNERYTFSPDWW 369
Query: 331 AFGVLLLELITGRRAVDSRRQSL 353
A G LL E+I G+ R++ +
Sbjct: 370 ALGCLLYEMIAGQSPFQQRKKKI 392
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 131
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 132 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDSELKILDFGLARHTDDEMTG 187
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 188 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 121
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 122 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 177
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 178 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++ G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 121
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 122 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 177
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 178 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
+ I L+E I+ +N P KL F + ++V+++ P G + S L E
Sbjct: 83 KEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+++ + +++DFGLAK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLMIDQQGYIKVTDFGLAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 122
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 123 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 178
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 179 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 69 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 123
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 124 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 179
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 180 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPI 306
+ +A G+++L A NILLSE+ +I DFGLA+ + N +
Sbjct: 205 SFQVARGMEFLSSRKCIHRDLA---ARNILLSENNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 307 EGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+++PE I K+DV+++GVLL E+ +
Sbjct: 262 RLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++ G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K N+LL +D +ISD GLA L + + GT G+++PE + D D F
Sbjct: 316 KPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AGTPGFMAPELLLGEEYDFSVDYF 373
Query: 331 AFGVLLLELITGRRAVDSR 349
A GV L E+I R +R
Sbjct: 374 ALGVTLYEMIAARGPFRAR 392
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K N+LL +D +ISD GLA L + + GT G+++PE + D D F
Sbjct: 316 KPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AGTPGFMAPELLLGEEYDFSVDYF 373
Query: 331 AFGVLLLELITGRRAVDSR 349
A GV L E+I R +R
Sbjct: 374 ALGVTLYEMIAARGPFRAR 392
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWTIR 243
EL ++ H+ H N L+ T N +LV + G+ + + + + ++
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQ 134
Query: 244 YKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV 303
+ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D + ++
Sbjct: 135 FLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 189
Query: 304 FPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 190 ----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++ G + S L E
Sbjct: 78 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH 137
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 138 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 189
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 190 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 139 AATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHI 198
+++ F +G G +A VYKG L +E S + E+ ++ +
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKG-LNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 199 NHPNAAKLIG-FSTENGFHLVLQFLPHG---SLSSLLFGST-ECLEWTIRYKIALGIAEG 253
H N +L TEN LV +F+ + + S G+T LE + + +G
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQG 120
Query: 254 LQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAK--WLPDN-WSHHIVFPIEGTF 310
L + K N+L+++ + ++ DFGLA+ +P N +S +V T
Sbjct: 121 LAFCHENKILHRDL---KPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-----TL 172
Query: 311 GYLSPEYFMHG-IVDEKTDVFAFGVLLLELITGR 343
Y +P+ M D+++ G +L E+ITG+
Sbjct: 173 WYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWTIR 243
EL ++ H+ H N L+ T N +LV + G+ + + + + ++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQ 128
Query: 244 YKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV 303
+ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D + ++
Sbjct: 129 FLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTGYV- 183
Query: 304 FPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 184 ----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++ G + S L E
Sbjct: 104 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH 163
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 164 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 215
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 216 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 131
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 132 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 187
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 188 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V+++ P G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+++ + +++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLMIDQQGYIKVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V+++ P G + S L E
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPH 143
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+++ + +++DFG AK +
Sbjct: 144 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLMIDQQGYIKVTDFGFAKRVKGR---- 195
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 196 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++ G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 89/213 (41%), Gaps = 31/213 (14%)
Query: 150 IGKGGHAEVYKGCLPD-----GEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAA 204
+G+G VY+G D E ERI +FL+E ++ +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEASVMKGFTCHHVV 83
Query: 205 KLIGFSTENGFHLV-LQFLPHGSLSSLLFG-----------STECLEWTIRYKIALGIAE 252
+L+G ++ LV ++ + HG L S L L+ I ++A IA+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI--QMAAEIAD 141
Query: 253 GLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI----VFPIEG 308
G+ YL A N +++ D+ +I DFG+ + + + + P+
Sbjct: 142 GMAYLNAKKFVHRDLA---ARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR- 197
Query: 309 TFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+++PE G+ +D+++FGV+L E+ +
Sbjct: 198 ---WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 21/170 (12%)
Query: 245 KIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVF 304
KIA+ I + L++L K SN+L++ + ++ DFG++ +L D+ + I
Sbjct: 157 KIAVSIVKALEHLHSKLSVIHRDV--KPSNVLINALGQVKMCDFGISGYLVDSVAKTI-- 212
Query: 305 PIEGTFGYLSPEYFMHGIVDE----KTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPL 360
G Y++PE + + K+D+++ G+ ++EL R DS W P
Sbjct: 213 -DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS-------WGTPF 264
Query: 361 LQTSNFKELVDPRL-ADAYDLAEMKRAMLTASVCIHHLSTMRPQMTRVLQ 409
Q E P+L AD + AE + S C+ S RP ++Q
Sbjct: 265 QQLKQVVEEPSPQLPADKFS-AEF---VDFTSQCLKKNSKERPTYPELMQ 310
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 11/160 (6%)
Query: 188 FLSELGIVAHINHPNAAKLI-GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKI 246
F E I+A N P +L F + ++V++++P G L +L+ +W Y
Sbjct: 122 FWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFY-- 179
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPI 306
AE + L K N+LL + +++DFG + + H +
Sbjct: 180 ---TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV 236
Query: 307 EGTFGYLSPEYFMH----GIVDEKTDVFAFGVLLLELITG 342
GT Y+SPE G + D ++ GV L E++ G
Sbjct: 237 -GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 71/158 (44%), Gaps = 11/158 (6%)
Query: 191 ELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
EL A + P L G E + ++ ++ L GSL L+ CL R LG
Sbjct: 135 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV-KEQGCLP-EDRALYYLG 192
Query: 250 IA-EGLQYLXXXXXXXXXXXXXKASNILLSED-YEAQISDFGLAKWL-PDNWSHHIVFP- 305
A EGL+YL KA N+LLS D A + DFG A L PD ++
Sbjct: 193 QALEGLEYLHSRRILHGDV---KADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGD 249
Query: 306 -IEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
I GT +++PE + D K DV++ ++L ++ G
Sbjct: 250 YIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 71/179 (39%), Gaps = 22/179 (12%)
Query: 191 ELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I + H + GF +N F +VL+ SL L E RY +
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-Q 123
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I G QYL K N+ L+ED E +I DFGLA + + V + GT
Sbjct: 124 IVLGCQYLHRNRVIHRDL---KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV--LCGT 178
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPLLQTSNFKE 368
Y++PE + DV++ G ++ L+ G KP +TS KE
Sbjct: 179 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG---------------KPPFETSCLKE 222
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 12/162 (7%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++ G + S L E
Sbjct: 104 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 163
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPD-NWSH 300
R+ A I +YL K N+L+ + Q++DFG AK + W+
Sbjct: 164 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGATWT- 218
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 219 -----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I +N P KL F + ++VL++ P G + S L E
Sbjct: 84 KQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPH 143
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + +++DFG AK +
Sbjct: 144 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIKVADFGFAKRVKGR---- 195
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 196 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 71/158 (44%), Gaps = 11/158 (6%)
Query: 191 ELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
EL A + P L G E + ++ ++ L GSL L+ CL R LG
Sbjct: 116 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV-KEQGCLP-EDRALYYLG 173
Query: 250 IA-EGLQYLXXXXXXXXXXXXXKASNILLSED-YEAQISDFGLAKWL-PDNWSHHIVFP- 305
A EGL+YL KA N+LLS D A + DFG A L PD ++
Sbjct: 174 QALEGLEYLHSRRILHGDV---KADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGD 230
Query: 306 -IEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
I GT +++PE + D K DV++ ++L ++ G
Sbjct: 231 YIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++ G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 23/162 (14%)
Query: 203 AAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXX- 261
AA+ G + E L+ F GSL+ L G+ + W +A ++ GL YL
Sbjct: 76 AAEKRGSNLEVELWLITAFHDKGSLTDYLKGNI--ITWNELCHVAETMSRGLSYLHEDVP 133
Query: 262 -------XXXXXXXXXKASNILLSEDYEAQISDFGLAKWL----PDNWSHHIVFPIEGTF 310
K+ N+LL D A ++DFGLA P +H V GT
Sbjct: 134 WCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV----GTR 189
Query: 311 GYLSPEYFMHGIVDE-----KTDVFAFGVLLLELITGRRAVD 347
Y++PE I + + D++A G++L EL++ +A D
Sbjct: 190 RYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++ G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++ G + S L E
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 143
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 144 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 195
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 196 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++ G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++ G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V+++ P G + S L E
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH 143
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+++ + +++DFG AK +
Sbjct: 144 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLMIDQQGYIKVTDFGFAKRVKGR---- 195
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 196 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++ G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 20/161 (12%)
Query: 191 ELGIVAHINHPNAAKLIGFSTENG-------FHLVLQFLPHGSLSSLLFGSTECLEWTIR 243
EL ++ H+ H N L+ T F+LV+ F+ L ++ E E I+
Sbjct: 91 ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM-QTDLQKIM--GMEFSEEKIQ 147
Query: 244 YKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV 303
Y + + +GL+Y+ K N+ ++ED E +I DFGLA+ + ++V
Sbjct: 148 Y-LVYQMLKGLKYIHSAGVVHRDL---KPGNLAVNEDCELKILDFGLARHADAEMTGYVV 203
Query: 304 FPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
T Y +PE + + ++ D+++ G ++ E++TG+
Sbjct: 204 -----TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V+++ P G + S L E
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH 143
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+++ + +++DFG AK +
Sbjct: 144 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLMIDQQGYIKVTDFGFAKRVKGR---- 195
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 196 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V+++ P G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+++ + +++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLMIDQQGYIKVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V+++ P G + S L E
Sbjct: 84 KQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH 143
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+++ + +++DFG AK +
Sbjct: 144 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLMIDQQGYIKVTDFGFAKRVKGR---- 195
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 196 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++ G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 148
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D
Sbjct: 149 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMXG 204
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 205 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 125
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I D+GLA+ D +
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDYGLARHTDDEMTG 181
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 182 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Query: 191 ELGIVAHINHPNAAKLIGFSTEN-------GFHLVLQFLPHGSLSSLLFGSTECLEWTIR 243
EL ++ H+ H N L+ T + F+LV+ F+ G+ L + E I+
Sbjct: 74 ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQ 131
Query: 244 YKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV 303
+ + + +GL+Y+ K N+ ++ED E +I DFGLA+ +V
Sbjct: 132 F-LVYQMLKGLRYIHAAGIIHRDL---KPGNLAVNEDCELKILDFGLARQADSEMXGXVV 187
Query: 304 FPIEGTFGYLSPEYFMHGIVDEKT-DVFAFGVLLLELITGR 343
T Y +PE ++ + +T D+++ G ++ E+ITG+
Sbjct: 188 -----TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 68/171 (39%), Gaps = 18/171 (10%)
Query: 190 SELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLL---FGSTECLEWTIRYK 245
E+ I A +NH N K G E +L L++ G L + G E ++
Sbjct: 54 KEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFP 305
+ G+ YL K N+LL E +ISDFGLA N ++
Sbjct: 114 LMAGVV----YLHGIGITHRDI---KPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 306 IEGTFGYLSPEYF----MHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQS 352
+ GT Y++PE H E DV++ G++L ++ G D S
Sbjct: 167 MCGTLPYVAPELLKRREFHA---EPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 88/224 (39%), Gaps = 39/224 (17%)
Query: 150 IGKGGHAEVYK----GCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAK 205
IG+G V++ G LP + +DF E ++A ++PN K
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 206 LIGF-STENGFHLVLQFLPHGSLSSLLFG---STEC--------------------LEWT 241
L+G + L+ +++ +G L+ L T C L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAK--WLPDNWS 299
+ IA +A G+ YL N L+ E+ +I+DFGL++ + D +
Sbjct: 175 EQLCIARQVAAGMAYLSERKFVHRDL---ATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 300 H--HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ PI ++ PE + ++DV+A+GV+L E+ +
Sbjct: 232 ADGNDAIPIR----WMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 125
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 181
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
+ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 182 XV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 21/170 (12%)
Query: 245 KIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVF 304
KIA+ I + L++L K SN+L++ + ++ DFG++ +L D+ + I
Sbjct: 113 KIAVSIVKALEHLHSKLSVIHRDV--KPSNVLINALGQVKMCDFGISGYLVDDVAKDI-- 168
Query: 305 PIEGTFGYLSPEYFMHGIVDE----KTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPL 360
G Y++PE + + K+D+++ G+ ++EL R DS W P
Sbjct: 169 -DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS-------WGTPF 220
Query: 361 LQTSNFKELVDPRL-ADAYDLAEMKRAMLTASVCIHHLSTMRPQMTRVLQ 409
Q E P+L AD + AE + S C+ S RP ++Q
Sbjct: 221 QQLKQVVEEPSPQLPADKFS-AEF---VDFTSQCLKKNSKERPTYPELMQ 266
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 22/174 (12%)
Query: 180 EDEERISDF----LSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGS 234
+D + I F +E+ ++ ++HPN KL F + F+LV +F G L +
Sbjct: 81 DDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR 140
Query: 235 ---TECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSED---YEAQISDF 288
EC I +I GI YL K NILL +I DF
Sbjct: 141 HKFDECDAANIMKQILSGIC----YL---HKHNIVHRDIKPENILLENKNSLLNIKIVDF 193
Query: 289 GLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
GL+ + ++ GT Y++PE + +EK DV++ GV++ L+ G
Sbjct: 194 GLSSFFSKDYKLRDRL---GTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 125
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMAG 181
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
+ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 182 FV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 125
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMAG 181
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
+ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 182 FV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 79/198 (39%), Gaps = 15/198 (7%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIG- 208
IG+G + VYK GE EDE S + E+ I+ + H N KL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEK-EDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 209 FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXX 268
T+ LV + L L LL LE L + G+ Y
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDL- 126
Query: 269 XXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLSPEYFMHGIVDE 325
K N+L++ + E +I+DFGLA+ ++H IV T Y +P+ M
Sbjct: 127 --KPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-----TLWYRAPDVLMGSKKYS 179
Query: 326 KT-DVFAFGVLLLELITG 342
T D+++ G + E++ G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 121
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 122 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMAG 177
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
+ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 178 FV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 70/177 (39%), Gaps = 12/177 (6%)
Query: 194 IVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAE 252
++ ++ HP L F T + + VL ++ G L L LE R+ A IA
Sbjct: 92 LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIAS 150
Query: 253 GLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH-IVFPIEGTFG 311
L YL K NILL ++DFGL K +N H+ GT
Sbjct: 151 ALGYLHSLNIVYRDL---KPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGTPE 204
Query: 312 YLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLV---IWAKPLLQTSN 365
YL+PE D D + G +L E++ G SR + + I KPL N
Sbjct: 205 YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPN 261
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 78/209 (37%), Gaps = 16/209 (7%)
Query: 141 TDNFNSENLIGKGGHAEV---YKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAH 197
TD + IGKG + V K C D +++ E I
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLE---REARICRL 59
Query: 198 INHPNAAKLIGFSTENGFH-LVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQY 256
+ H N +L +E GFH LV + G L F E+ + I + L+
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQILEA 115
Query: 257 LXXXXXXXXXXXXXKASNILLSEDYEA---QISDFGLAKWLPDNWSHHIVFPIEGTFGYL 313
+ K N+LL+ + +++DFGLA + F GT GYL
Sbjct: 116 VLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGDQQAWFGFAGTPGYL 173
Query: 314 SPEYFMHGIVDEKTDVFAFGVLLLELITG 342
SPE + D++A GV+L L+ G
Sbjct: 174 SPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 65/167 (38%), Gaps = 19/167 (11%)
Query: 198 INHPNAAKLIG-----FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAE 252
+ H N + IG S + L+ F GSLS L + W IA +A
Sbjct: 75 MKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL--KANVVSWNELCHIAETMAR 132
Query: 253 GLQYLXXXX-------XXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFP 305
GL YL K+ N+LL + A I+DFGLA S
Sbjct: 133 GLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHG 192
Query: 306 IEGTFGYLSPEYFMHGIVDE-----KTDVFAFGVLLLELITGRRAVD 347
GT Y++PE I + + D++A G++L EL + A D
Sbjct: 193 QVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 100 ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 154
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D +
Sbjct: 155 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMTG 210
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + + D+++ G ++ EL+TGR
Sbjct: 211 YV-----ATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 7/159 (4%)
Query: 191 ELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I + H + GF +N F +VL+ SL L E RY +
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-Q 125
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I G QYL K N+ L+ED E +I DFGLA + + + GT
Sbjct: 126 IVLGCQYLHRNRVIHRDL---KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGT 180
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDS 348
Y++PE + DV++ G ++ L+ G+ ++
Sbjct: 181 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 219
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 7/159 (4%)
Query: 191 ELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I + H + GF +N F +VL+ SL L E RY +
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-Q 125
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I G QYL K N+ L+ED E +I DFGLA + + + GT
Sbjct: 126 IVLGCQYLHRNRVIHRDL---KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGT 180
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDS 348
Y++PE + DV++ G ++ L+ G+ ++
Sbjct: 181 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 219
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 7/159 (4%)
Query: 191 ELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I + H + GF +N F +VL+ SL L E RY +
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-Q 129
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I G QYL K N+ L+ED E +I DFGLA + + + GT
Sbjct: 130 IVLGCQYLHRNRVIHRDL---KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGT 184
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDS 348
Y++PE + DV++ G ++ L+ G+ ++
Sbjct: 185 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 223
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++ G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ ++ G
Sbjct: 195 -TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 145
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DFGLA+ D
Sbjct: 146 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFGLARHTDDEMXG 201
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
+ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 202 XV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++ G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+++ + Q++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLIIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 79/198 (39%), Gaps = 15/198 (7%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIG- 208
IG+G + VYK GE EDE S + E+ I+ + H N KL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEK-EDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 209 FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXX 268
T+ LV + L L LL LE L + G+ Y
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDL- 126
Query: 269 XXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLSPEYFMHGIVDE 325
K N+L++ + E +I+DFGLA+ ++H +V T Y +P+ M
Sbjct: 127 --KPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-----TLWYRAPDVLMGSKKYS 179
Query: 326 KT-DVFAFGVLLLELITG 342
T D+++ G + E++ G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 79/198 (39%), Gaps = 15/198 (7%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIG- 208
IG+G + VYK GE EDE S + E+ I+ + H N KL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEK-EDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 209 FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXX 268
T+ LV + L L LL LE L + G+ Y
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDL- 126
Query: 269 XXKASNILLSEDYEAQISDFGLAKWL---PDNWSHHIVFPIEGTFGYLSPEYFMHGIVDE 325
K N+L++ + E +I+DFGLA+ ++H +V T Y +P+ M
Sbjct: 127 --KPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-----TLWYRAPDVLMGSKKYS 179
Query: 326 KT-DVFAFGVLLLELITG 342
T D+++ G + E++ G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 65/161 (40%), Gaps = 18/161 (11%)
Query: 190 SELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLL---FGSTECLEWTIRYK 245
E+ I +NH N K G E +L L++ G L + G E ++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFP 305
+ G+ YL K N+LL E +ISDFGLA N ++
Sbjct: 113 LMAGVV----YLHGIGITHRDI---KPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 306 IEGTFGYLSPEYF----MHGIVDEKTDVFAFGVLLLELITG 342
+ GT Y++PE H E DV++ G++L ++ G
Sbjct: 166 MXGTLPYVAPELLKRREFHA---EPVDVWSCGIVLTAMLAG 203
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 65/161 (40%), Gaps = 18/161 (11%)
Query: 190 SELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLL---FGSTECLEWTIRYK 245
E+ I +NH N K G E +L L++ G L + G E ++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFP 305
+ G+ YL K N+LL E +ISDFGLA N ++
Sbjct: 113 LMAGVV----YLHGIGITHRDI---KPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 306 IEGTFGYLSPEYF----MHGIVDEKTDVFAFGVLLLELITG 342
+ GT Y++PE H E DV++ G++L ++ G
Sbjct: 166 MXGTLPYVAPELLKRREFHA---EPVDVWSCGIVLTAMLAG 203
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 65/161 (40%), Gaps = 18/161 (11%)
Query: 190 SELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLL---FGSTECLEWTIRYK 245
E+ I +NH N K G E +L L++ G L + G E ++
Sbjct: 53 KEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFP 305
+ G+ YL K N+LL E +ISDFGLA N ++
Sbjct: 113 LMAGVV----YLHGIGITHRDI---KPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 306 IEGTFGYLSPEYF----MHGIVDEKTDVFAFGVLLLELITG 342
+ GT Y++PE H E DV++ G++L ++ G
Sbjct: 166 MXGTLPYVAPELLKRREFHA---EPVDVWSCGIVLTAMLAG 203
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 85/215 (39%), Gaps = 9/215 (4%)
Query: 140 ATDNFNSENLIGKGGHAEVYKGCLPD-GEXXXXXXXXXXXXEDEERISDFLSELGIVAHI 198
DNF ++GKG +V + + G+ ++ + ++E I++
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 199 -NHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQY 256
NHP +L F T + V++F+ G L + S E R+ A E +
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAA----EIISA 136
Query: 257 LXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPE 316
L K N+LL + +++DFG+ K N F GT Y++PE
Sbjct: 137 LMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFC--GTPDYIAPE 194
Query: 317 YFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQ 351
+ D +A GVLL E++ G ++ +
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE 229
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 16/164 (9%)
Query: 200 HPNAAKLI-GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLX 258
HP+ LI + + + LV + G L L E R I + E + +L
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETR-SIMRSLLEAVSFLH 217
Query: 259 XXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL-PDNWSHHIVFPIEGTFGYLSPEY 317
K NILL ++ + ++SDFG + L P + GT GYL+PE
Sbjct: 218 ANNIVHRDL---KPENILLDDNMQIRLSDFGFSCHLEPGEKLRELC----GTPGYLAPEI 270
Query: 318 F------MHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVI 355
H ++ D++A GV+L L+ G RRQ L++
Sbjct: 271 LKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILML 314
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 67/171 (39%), Gaps = 18/171 (10%)
Query: 190 SELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLL---FGSTECLEWTIRYK 245
E+ I +NH N K G E +L L++ G L + G E ++
Sbjct: 54 KEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFP 305
+ G+ YL K N+LL E +ISDFGLA N ++
Sbjct: 114 LMAGVV----YLHGIGITHRDI---KPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 306 IEGTFGYLSPEYF----MHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQS 352
+ GT Y++PE H E DV++ G++L ++ G D S
Sbjct: 167 MXGTLPYVAPELLKRREFHA---EPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 84/211 (39%), Gaps = 20/211 (9%)
Query: 143 NFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPN 202
+F LIG GG +V+K E ER L++L V +I H N
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHV-NIVHYN 70
Query: 203 ------------AAKLIGFSTENGFHLVLQFLPHGSLSSLLFGST-ECLEWTIRYKIALG 249
++K S + ++F G+L + E L+ + ++
Sbjct: 71 GCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQ 130
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGT 309
I +G+ Y+ K SNI L + + +I DFGL L ++ +GT
Sbjct: 131 ITKGVDYIHSKKLINRDL---KPSNIFLVDTKQVKIGDFGLVTSLKNDGKRX---RSKGT 184
Query: 310 FGYLSPEYFMHGIVDEKTDVFAFGVLLLELI 340
Y+SPE ++ D++A G++L EL+
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 80/201 (39%), Gaps = 20/201 (9%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDF-LSELGIVAHINHPNAAKLIG 208
IG+G + V+K C ED+ I L E+ ++ + HPN L+
Sbjct: 11 IGEGSYGVVFK-CRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 209 -FSTENGFHLVLQFLPHGSLSSL---LFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXX 264
F + HLV ++ H L L G E L +I + + LQ +
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITW-------QTLQAVNFCHKHN 122
Query: 265 XXXXXXKASNILLSEDYEAQISDFGLAKWL--PDNWSHHIVFPIEGTFGYLSPEYFMHGI 322
K NIL+++ ++ DFG A+ L P ++ V T Y SPE +
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV----ATRWYRSPELLVGDT 178
Query: 323 -VDEKTDVFAFGVLLLELITG 342
DV+A G + EL++G
Sbjct: 179 QYGPPVDVWAIGCVFAELLSG 199
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 67/171 (39%), Gaps = 18/171 (10%)
Query: 190 SELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLL---FGSTECLEWTIRYK 245
E+ I +NH N K G E +L L++ G L + G E ++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFP 305
+ G+ YL K N+LL E +ISDFGLA N ++
Sbjct: 113 LMAGVV----YLHGIGITHRDI---KPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 306 IEGTFGYLSPEYF----MHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQS 352
+ GT Y++PE H E DV++ G++L ++ G D S
Sbjct: 166 MXGTLPYVAPELLKRREFHA---EPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 65/161 (40%), Gaps = 18/161 (11%)
Query: 190 SELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLL---FGSTECLEWTIRYK 245
E+ I +NH N K G E +L L++ G L + G E ++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFP 305
+ G+ YL K N+LL E +ISDFGLA N ++
Sbjct: 113 LMAGVV----YLHGIGITHRDI---KPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 306 IEGTFGYLSPEYF----MHGIVDEKTDVFAFGVLLLELITG 342
+ GT Y++PE H E DV++ G++L ++ G
Sbjct: 166 MCGTLPYVAPELLKRREFHA---EPVDVWSCGIVLTAMLAG 203
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 65/161 (40%), Gaps = 18/161 (11%)
Query: 190 SELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLL---FGSTECLEWTIRYK 245
E+ I +NH N K G E +L L++ G L + G E ++
Sbjct: 52 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 111
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFP 305
+ G+ YL K N+LL E +ISDFGLA N ++
Sbjct: 112 LMAGVV----YLHGIGITHRDI---KPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 164
Query: 306 IEGTFGYLSPEYF----MHGIVDEKTDVFAFGVLLLELITG 342
+ GT Y++PE H E DV++ G++L ++ G
Sbjct: 165 MCGTLPYVAPELLKRREFHA---EPVDVWSCGIVLTAMLAG 202
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 65/161 (40%), Gaps = 18/161 (11%)
Query: 190 SELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLL---FGSTECLEWTIRYK 245
E+ I +NH N K G E +L L++ G L + G E ++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFP 305
+ G+ YL K N+LL E +ISDFGLA N ++
Sbjct: 113 LMAGVV----YLHGIGITHRDI---KPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 306 IEGTFGYLSPEYF----MHGIVDEKTDVFAFGVLLLELITG 342
+ GT Y++PE H E DV++ G++L ++ G
Sbjct: 166 MCGTLPYVAPELLKRREFHA---EPVDVWSCGIVLTAMLAG 203
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 65/161 (40%), Gaps = 18/161 (11%)
Query: 190 SELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLL---FGSTECLEWTIRYK 245
E+ I +NH N K G E +L L++ G L + G E ++
Sbjct: 53 KEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFP 305
+ G+ YL K N+LL E +ISDFGLA N ++
Sbjct: 113 LMAGVV----YLHGIGITHRDI---KPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 306 IEGTFGYLSPEYF----MHGIVDEKTDVFAFGVLLLELITG 342
+ GT Y++PE H E DV++ G++L ++ G
Sbjct: 166 MCGTLPYVAPELLKRREFHA---EPVDVWSCGIVLTAMLAG 203
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 67/171 (39%), Gaps = 18/171 (10%)
Query: 190 SELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLL---FGSTECLEWTIRYK 245
E+ I +NH N K G E +L L++ G L + G E ++
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFP 305
+ G+ YL K N+LL E +ISDFGLA N ++
Sbjct: 114 LMAGVV----YLHGIGITHRDI---KPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 306 IEGTFGYLSPEYF----MHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQS 352
+ GT Y++PE H E DV++ G++L ++ G D S
Sbjct: 167 MCGTLPYVAPELLKRREFHA---EPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 67/170 (39%), Gaps = 18/170 (10%)
Query: 191 ELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLL---FGSTECLEWTIRYKI 246
E+ I +NH N K G E +L L++ G L + G E +++
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPI 306
G+ YL K N+LL E +ISDFGLA N ++ +
Sbjct: 115 MAGVV----YLHGIGITHRDI---KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 307 EGTFGYLSPEYF----MHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQS 352
GT Y++PE H E DV++ G++L ++ G D S
Sbjct: 168 CGTLPYVAPELLKRREFHA---EPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 67/170 (39%), Gaps = 18/170 (10%)
Query: 191 ELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLL---FGSTECLEWTIRYKI 246
E+ I +NH N K G E +L L++ G L + G E +++
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPI 306
G+ YL K N+LL E +ISDFGLA N ++ +
Sbjct: 115 MAGVV----YLHGIGITHRDI---KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 307 EGTFGYLSPEYF----MHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQS 352
GT Y++PE H E DV++ G++L ++ G D S
Sbjct: 168 CGTLPYVAPELLKRREFHA---EPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 67/170 (39%), Gaps = 18/170 (10%)
Query: 191 ELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLL---FGSTECLEWTIRYKI 246
E+ I +NH N K G E +L L++ G L + G E +++
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPI 306
G+ YL K N+LL E +ISDFGLA N ++ +
Sbjct: 115 MAGVV----YLHGIGITHRDI---KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 307 EGTFGYLSPEYF----MHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQS 352
GT Y++PE H E DV++ G++L ++ G D S
Sbjct: 168 CGTLPYVAPELLKRREFHA---EPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K N++L + +I+DFG+ K + W GT Y++PE + + D +
Sbjct: 469 KLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWW 526
Query: 331 AFGVLLLELITGR 343
AFGVLL E++ G+
Sbjct: 527 AFGVLLYEMLAGQ 539
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 125
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I FGLA+ D +
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILGFGLARHTDDEMTG 181
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 182 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 82/178 (46%), Gaps = 32/178 (17%)
Query: 188 FLSELGIVAHI-NHPNAAKLIGFSTENGFHLVL-QFLPHGSLSSLLFGSTECLEWT---- 241
+SEL +++++ NH N L+G T G LV+ ++ +G L + L + +
Sbjct: 96 LMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP 155
Query: 242 -------------IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDF 288
+ +A+G+ +L A NILL+ +I DF
Sbjct: 156 AIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLA---ARNILLTHGRITKICDF 212
Query: 289 GLAKWLPDNWSHHIV-----FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
GLA+ + ++ S+++V P++ +++PE + + ++DV+++G+ L EL +
Sbjct: 213 GLARHIKND-SNYVVKGNARLPVK----WMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 69/168 (41%), Gaps = 19/168 (11%)
Query: 189 LSELGIVAHIN----HPNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFG--STECLEWTI 242
L GIV + N KL S + ++ +Q +L + G + E E ++
Sbjct: 60 LEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSV 119
Query: 243 RYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL-PDNWSHH 301
I L IAE +++L K SNI + D ++ DFGL + D
Sbjct: 120 CLHIFLQIAEAVEFLHSKGLMHRDL---KPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 302 IVFPIE---------GTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELI 340
++ P+ GT Y+SPE K D+F+ G++L EL+
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 67/171 (39%), Gaps = 18/171 (10%)
Query: 190 SELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLL---FGSTECLEWTIRYK 245
E+ I +NH N K G E +L L++ G L + G E ++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFP 305
+ G+ YL K N+LL E +ISDFGLA N ++
Sbjct: 113 LMAGVV----YLHGIGITHRDI---KPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 306 IEGTFGYLSPEYF----MHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQS 352
+ GT Y++PE H E DV++ G++L ++ G D S
Sbjct: 166 MCGTLPYVAPELLKRREFHA---EPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 20/161 (12%)
Query: 191 ELGIVAHINHPNAAKLIGFSTENG-------FHLVLQFLPHGSLSSLLFGSTECLEWTIR 243
EL ++ H+ H N L+ T F+LV+ F+ L ++ + E I+
Sbjct: 73 ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM-QTDLQKIM--GLKFSEEKIQ 129
Query: 244 YKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV 303
Y + + +GL+Y+ K N+ ++ED E +I DFGLA+ + ++V
Sbjct: 130 Y-LVYQMLKGLKYIHSAGVVHRDL---KPGNLAVNEDCELKILDFGLARHADAEMTGYVV 185
Query: 304 FPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
T Y +PE + + ++ D+++ G ++ E++TG+
Sbjct: 186 -----TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++ G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT YL+P + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 125
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I D GLA+ D +
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDAGLARHTDDEMTG 181
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 182 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 64/157 (40%), Gaps = 12/157 (7%)
Query: 191 ELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLL---FGSTECLEWTIRYKI 246
E+ I +NH N K G E +L L++ G L + G E +++
Sbjct: 55 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 114
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPI 306
G+ YL K N+LL E +ISDFGLA N ++ +
Sbjct: 115 MAGVV----YLHGIGITHRDI---KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 307 EGTFGYLSPEYF-MHGIVDEKTDVFAFGVLLLELITG 342
GT Y++PE E DV++ G++L ++ G
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 67/171 (39%), Gaps = 18/171 (10%)
Query: 190 SELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLL---FGSTECLEWTIRYK 245
E+ I +NH N K G E +L L++ G L + G E ++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFP 305
+ G+ YL K N+LL E +ISDFGLA N ++
Sbjct: 113 LMAGVV----YLHGIGITHRDI---KPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 306 IEGTFGYLSPEYF----MHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQS 352
+ GT Y++PE H E DV++ G++L ++ G D S
Sbjct: 166 MCGTLPYVAPELLKRREFHA---EPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 125
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I DF LA+ D +
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDFYLARHTDDEMTG 181
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 182 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 65/160 (40%), Gaps = 18/160 (11%)
Query: 191 ELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLL---FGSTECLEWTIRYKI 246
E+ I +NH N K G E +L L++ G L + G E +++
Sbjct: 54 EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL 113
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPI 306
G+ YL K N+LL E +ISDFGLA N ++ +
Sbjct: 114 MAGVV----YLHGIGITHRDI---KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 307 EGTFGYLSPEYF----MHGIVDEKTDVFAFGVLLLELITG 342
GT Y++PE H E DV++ G++L ++ G
Sbjct: 167 CGTLPYVAPELLKRREFHA---EPVDVWSCGIVLTAMLAG 203
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 67/171 (39%), Gaps = 18/171 (10%)
Query: 190 SELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLL---FGSTECLEWTIRYK 245
E+ I +NH N K G E +L L++ G L + G E ++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFP 305
+ G+ YL K N+LL E +ISDFGLA N ++
Sbjct: 113 LMAGVV----YLHGIGITHRDI---KPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 306 IEGTFGYLSPEYF----MHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQS 352
+ GT Y++PE H E DV++ G++L ++ G D S
Sbjct: 166 MCGTLPYVAPELLKRREFHA---EPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 67/171 (39%), Gaps = 18/171 (10%)
Query: 190 SELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLL---FGSTECLEWTIRYK 245
E+ I +NH N K G E +L L++ G L + G E ++
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFP 305
+ G+ YL K N+LL E +ISDFGLA N ++
Sbjct: 113 LMAGVV----YLHGIGITHRDI---KPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 306 IEGTFGYLSPEYF----MHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQS 352
+ GT Y++PE H E DV++ G++L ++ G D S
Sbjct: 166 MCGTLPYVAPELLKRREFHA---EPVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 125
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I D GLA+ D +
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDRGLARHTDDEMTG 181
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 182 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 67/171 (39%), Gaps = 18/171 (10%)
Query: 190 SELGIVAHINHPNAAKLIGFSTENGF-HLVLQFLPHGSLSSLL---FGSTECLEWTIRYK 245
E+ I +NH N K G E +L L++ G L + G E ++
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFP 305
+ G+ YL K N+LL E +ISDFGLA N ++
Sbjct: 114 LMAGVV----YLHGIGITHRDI---KPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 306 IEGTFGYLSPEYF----MHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQS 352
+ GT Y++PE H E DV++ G++L ++ G D S
Sbjct: 167 MCGTLPYVAPELLKRREFHA---EPVDVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 39/181 (21%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFSTE-NGFHLVLQFLPHGSLSSLL-------------- 231
DF E ++ ++ H + K G + + +V +++ HG L+ L
Sbjct: 63 DFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQ 122
Query: 232 -------FGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQ 284
G ++ L IA IA G+ YL N L+ + +
Sbjct: 123 PRQAKGELGLSQMLH------IASQIASGMVYLASQHFVHRDLA---TRNCLVGANLLVK 173
Query: 285 ISDFGLAK--WLPDNW--SHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELI 340
I DFG+++ + D + H + PI ++ PE M+ ++DV++FGV+L E+
Sbjct: 174 IGDFGMSRDVYSTDYYRVGGHTMLPIR----WMPPESIMYRKFTTESDVWSFGVILWEIF 229
Query: 341 T 341
T
Sbjct: 230 T 230
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 82/178 (46%), Gaps = 32/178 (17%)
Query: 188 FLSELGIVAHI-NHPNAAKLIGFSTENGFHLVL-QFLPHGSLSSLLFGSTECLEWT---- 241
+SEL +++++ NH N L+G T G LV+ ++ +G L + L + +
Sbjct: 89 LMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP 148
Query: 242 -------------IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDF 288
+ +A+G+ +L A NILL+ +I DF
Sbjct: 149 AIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLA---ARNILLTHGRITKICDF 205
Query: 289 GLAKWLPDNWSHHIV-----FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
GLA+ + ++ S+++V P++ +++PE + + ++DV+++G+ L EL +
Sbjct: 206 GLARDIKND-SNYVVKGNARLPVK----WMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 186 SDFLSELGIVAHINHPNAAKLIGF-STENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRY 244
S L E+ ++ ++HPN KL F + ++LV++ G L + + E
Sbjct: 81 SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV 140
Query: 245 KIALGIAEGLQYLXXXXXXXXXXXXXKASNILLS---EDYEAQISDFGLAKWLPDNWSHH 301
I + G+ YL K N+LL +D +I DFGL+ +
Sbjct: 141 -IIKQVLSGVTYLHKHNIVHRDL---KPENLLLESKEKDALIKIVDFGLSAVFENQKKMK 196
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
GT Y++PE + DEK DV++ GV+L L+ G
Sbjct: 197 ERL---GTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K NIL+S D A + DFG+A D + + GT Y +PE F + D++
Sbjct: 161 KPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYRADIY 219
Query: 331 AFGVLLLELITG 342
A +L E +TG
Sbjct: 220 ALTCVLYECLTG 231
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 82/178 (46%), Gaps = 32/178 (17%)
Query: 188 FLSELGIVAHI-NHPNAAKLIGFSTENGFHLVL-QFLPHGSLSSLLFGSTECLEWT---- 241
+SEL +++++ NH N L+G T G LV+ ++ +G L + L + +
Sbjct: 96 LMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP 155
Query: 242 -------------IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDF 288
+ +A+G+ +L A NILL+ +I DF
Sbjct: 156 AIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLA---ARNILLTHGRITKICDF 212
Query: 289 GLAKWLPDNWSHHIV-----FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
GLA+ + ++ S+++V P++ +++PE + + ++DV+++G+ L EL +
Sbjct: 213 GLARDIKND-SNYVVKGNARLPVK----WMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 33/218 (15%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPN--AAKLI 207
+GKG + EV++G L GE + R ++ + + ++ H N A+ +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTV-LLRHDNILGFIASDMT 73
Query: 208 GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLX-----XXXX 262
++ L+ + HGSL L T LE + ++A+ A GL +L
Sbjct: 74 SRNSSTQLWLITHYHEHGSLYDFLQRQT--LEPHLALRLAVSAACGLAHLHVEIFGTQGK 131
Query: 263 XXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVF---PIEGTFGYLSPEYFM 319
K+ N+L+ + + I+D GLA + S ++ P GT Y++PE
Sbjct: 132 PAIAHRDFKSRNVLVKSNLQCCIADLGLAV-MHSQGSDYLDIGNNPRVGTKRYMAPE--- 187
Query: 320 HGIVDEK-----------TDVFAFGVLLLELITGRRAV 346
++DE+ TD++AFG++L E+ RR +
Sbjct: 188 --VLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTI 221
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 25/164 (15%)
Query: 191 ELGIVAHINHPNAAKLIGFSTE-------NGFHLVLQFLPHGSLSSLLFGSTECLEWT-- 241
EL ++ H+ H N L+ T N +LV + + L +C + T
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-----GADLNNIVKCQKLTDD 125
Query: 242 -IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+++ I I GL+Y+ K SN+ ++ED E +I D GLA+ D +
Sbjct: 126 HVQFLI-YQILRGLKYIHSADIIHRDL---KPSNLAVNEDCELKILDGGLARHTDDEMTG 181
Query: 301 HIVFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGR 343
++ T Y +PE ++ + ++ D+++ G ++ EL+TGR
Sbjct: 182 YV-----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 82/178 (46%), Gaps = 32/178 (17%)
Query: 188 FLSELGIVAHI-NHPNAAKLIGFSTENGFHLVL-QFLPHGSLSSLLFGSTECLEWT---- 241
+SEL +++++ NH N L+G T G LV+ ++ +G L + L + +
Sbjct: 91 LMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP 150
Query: 242 -------------IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDF 288
+ +A+G+ +L A NILL+ +I DF
Sbjct: 151 AIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLA---ARNILLTHGRITKICDF 207
Query: 289 GLAKWLPDNWSHHIV-----FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
GLA+ + ++ S+++V P++ +++PE + + ++DV+++G+ L EL +
Sbjct: 208 GLARDIKND-SNYVVKGNARLPVK----WMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 82/178 (46%), Gaps = 32/178 (17%)
Query: 188 FLSELGIVAHI-NHPNAAKLIGFSTENGFHLVL-QFLPHGSLSSLLFGSTECLEWT---- 241
+SEL +++++ NH N L+G T G LV+ ++ +G L + L + +
Sbjct: 73 LMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSP 132
Query: 242 -------------IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDF 288
+ +A+G+ +L A NILL+ +I DF
Sbjct: 133 AIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLA---ARNILLTHGRITKICDF 189
Query: 289 GLAKWLPDNWSHHIV-----FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
GLA+ + ++ S+++V P++ +++PE + + ++DV+++G+ L EL +
Sbjct: 190 GLARDIKND-SNYVVKGNARLPVK----WMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 9/156 (5%)
Query: 190 SELGIVAHINHPNAAKLI-GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIAL 248
+E+ ++ ++H N +L F ++N LV++++ G L + + L
Sbjct: 135 NEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK 194
Query: 249 GIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQIS--DFGLAKWLPDNWSHHIVFPI 306
I EG++++ K NIL QI DFGLA+ + F
Sbjct: 195 QICEGIRHMHQMYILHLDL---KPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF-- 249
Query: 307 EGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
GT +L+PE + V TD+++ GV+ L++G
Sbjct: 250 -GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K N++L + +I+DFG+ K + W GT Y++PE + + D +
Sbjct: 148 KLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWW 205
Query: 331 AFGVLLLELITGR 343
AFGVLL E++ G+
Sbjct: 206 AFGVLLYEMLAGQ 218
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 92/212 (43%), Gaps = 24/212 (11%)
Query: 182 EERISDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
++R +E+ I+ +H N + + + +V++FL G+L+ ++ T E
Sbjct: 83 QQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIV-THTRMNEE 141
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFG----LAKWLPD 296
I + L + L YL K+ +ILL+ D ++SDFG ++K +P
Sbjct: 142 QIA-TVCLSVLRALSYLHNQGVIHRDI---KSDSILLTSDGRIKLSDFGFCAQVSKEVPK 197
Query: 297 NWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIW 356
+ GT +++PE + D+++ G++++E+I G +
Sbjct: 198 RKX------LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG--------EPPYFN 243
Query: 357 AKPLLQTSNFKELVDPRLADAYDLAEMKRAML 388
PL ++ + PR+ D + ++ + R L
Sbjct: 244 EPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFL 275
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 10/156 (6%)
Query: 191 ELGIVAHINHPNAAKLIGFSTENGFH-LVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E I + HPN +L +E G H L+ + G L F E+ +
Sbjct: 71 EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL----FEDIVAREYYSEADASHC 126
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEA---QISDFGLAKWLPDNWSHHIVFPI 306
I + L+ + K N+LL+ + +++DFGLA + F
Sbjct: 127 IQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGF 184
Query: 307 EGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
GT GYLSPE + D++A GV+L L+ G
Sbjct: 185 AGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 79/202 (39%), Gaps = 12/202 (5%)
Query: 150 IGKGGHAEVYKGC-LPDGEXXXXXXXXXXXX-EDEERISDFLSELGIVAHINHPNAAKLI 207
IG GG A+V C + GE D RI +E+ + ++ H + +L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIK---TEIEALKNLRHQHICQLY 74
Query: 208 G-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXX 266
T N +VL++ P G L + E R + I + Y+
Sbjct: 75 HVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAVAYVHSQGYAHRD 133
Query: 267 XXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFM-HGIVDE 325
K N+L E ++ ++ DFGL N +H+ G+ Y +PE +
Sbjct: 134 L---KPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQ-TCCGSLAYAAPELIQGKSYLGS 189
Query: 326 KTDVFAFGVLLLELITGRRAVD 347
+ DV++ G+LL L+ G D
Sbjct: 190 EADVWSMGILLYVLMCGFLPFD 211
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 11/157 (7%)
Query: 190 SELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIAL 248
+E+ ++ I HPN L G +L++Q + G L + E ++
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-RLIF 123
Query: 249 GIAEGLQYLXXXXXXXXXXXXXKASNIL---LSEDYEAQISDFGLAKWLPDNWSHHIVFP 305
+ + ++YL K N+L L ED + ISDFGL+K + D S ++
Sbjct: 124 QVLDAVKYLHDLGIVHRDL---KPENLLYYSLDEDSKIMISDFGLSK-MEDPGS--VLST 177
Query: 306 IEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
GT GY++PE + D ++ GV+ L+ G
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 10/156 (6%)
Query: 191 ELGIVAHINHPNAAKLIGFSTENGFH-LVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E I + HPN +L +E G H L+ + G L F E+ +
Sbjct: 60 EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL----FEDIVAREYYSEADASHC 115
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEA---QISDFGLAKWLPDNWSHHIVFPI 306
I + L+ + K N+LL+ + +++DFGLA + F
Sbjct: 116 IQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGF 173
Query: 307 EGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
GT GYLSPE + D++A GV+L L+ G
Sbjct: 174 AGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 11/157 (7%)
Query: 190 SELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIAL 248
+E+ ++ I HPN L G +L++Q + G L + E ++
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-RLIF 123
Query: 249 GIAEGLQYLXXXXXXXXXXXXXKASNIL---LSEDYEAQISDFGLAKWLPDNWSHHIVFP 305
+ + ++YL K N+L L ED + ISDFGL+K + D S ++
Sbjct: 124 QVLDAVKYLHDLGIVHRDL---KPENLLYYSLDEDSKIMISDFGLSK-MEDPGS--VLST 177
Query: 306 IEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
GT GY++PE + D ++ GV+ L+ G
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 189 LSELGIVAHINHPNAAKL-------IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
L EL I+ H H N + + + ++VL + L ++ S
Sbjct: 102 LRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEH 160
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
+RY + + GL+Y+ K SN+L++E+ E +I DFG+A+ L + + H
Sbjct: 161 VRYFL-YQLLRGLKYMHSAQVIHRDL---KPSNLLVNENCELKIGDFGMARGLCTSPAEH 216
Query: 302 IVFPIE--GTFGYLSPEYF--MHGIVDEKTDVFAFGVLLLELITGRR 344
F E T Y +PE +H + D+++ G + E++ R+
Sbjct: 217 QYFMTEYVATRWYRAPELMLSLHEYT-QAIDLWSVGCIFGEMLARRQ 262
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 17/176 (9%)
Query: 189 LSELGIVAHIN-HPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKI 246
L E+ I+ ++ HPN +L + T F LV + G L L E R KI
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-KI 116
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL-PDNWSHHIVFP 305
+ L+ + K NILL +D +++DFG + L P +
Sbjct: 117 MRAL---LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC-- 171
Query: 306 IEGTFGYLSPEYFMHGIVD------EKTDVFAFGVLLLELITGRRAVDSRRQSLVI 355
GT YL+PE + D ++ D+++ GV++ L+ G R+Q L++
Sbjct: 172 --GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 225
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 11/157 (7%)
Query: 190 SELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIAL 248
+E+ ++ I HPN L G +L++Q + G L + E ++
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-RLIF 123
Query: 249 GIAEGLQYLXXXXXXXXXXXXXKASNIL---LSEDYEAQISDFGLAKWLPDNWSHHIVFP 305
+ + ++YL K N+L L ED + ISDFGL+K + D S ++
Sbjct: 124 QVLDAVKYLHDLGIVHRDL---KPENLLYYSLDEDSKIMISDFGLSK-MEDPGS--VLST 177
Query: 306 IEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
GT GY++PE + D ++ GV+ L+ G
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 189 LSELGIVAHINHPNAAKL-------IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
L EL I+ H H N + + + ++VL + L ++ S
Sbjct: 101 LRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEH 159
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
+RY + + GL+Y+ K SN+L++E+ E +I DFG+A+ L + + H
Sbjct: 160 VRYFL-YQLLRGLKYMHSAQVIHRDL---KPSNLLVNENCELKIGDFGMARGLCTSPAEH 215
Query: 302 IVFPIE--GTFGYLSPEYF--MHGIVDEKTDVFAFGVLLLELITGRR 344
F E T Y +PE +H + D+++ G + E++ R+
Sbjct: 216 QYFMTEYVATRWYRAPELMLSLHEYT-QAIDLWSVGCIFGEMLARRQ 261
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 11/157 (7%)
Query: 190 SELGIVAHINHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIAL 248
+E+ ++ I HPN L G +L++Q + G L + E ++
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-RLIF 123
Query: 249 GIAEGLQYLXXXXXXXXXXXXXKASNIL---LSEDYEAQISDFGLAKWLPDNWSHHIVFP 305
+ + ++YL K N+L L ED + ISDFGL+K + D S ++
Sbjct: 124 QVLDAVKYLHDLGIVHRDL---KPENLLYYSLDEDSKIMISDFGLSK-MEDPGS--VLST 177
Query: 306 IEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
GT GY++PE + D ++ GV+ L+ G
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 10/161 (6%)
Query: 183 ERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWT 241
++I L+E I+ +N P KL F + ++V++++ G + S L E
Sbjct: 83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH 142
Query: 242 IRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHH 301
R+ A I +YL K N+L+ + Q++DFG AK +
Sbjct: 143 ARF-YAAQIVLTFEYLHSLDLIYRDL---KPENLLIDQQGYIQVTDFGFAKRVKGR---- 194
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ + GT L+PE + ++ D +A GVL+ E+ G
Sbjct: 195 -TWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 77/191 (40%), Gaps = 40/191 (20%)
Query: 182 EERISDFLSELGIVAHINHPNAAK--------------LIGFSTENGFHLVLQFLPHGSL 227
EE++S LSE+ ++A +NH + + ++ + +++ +G+L
Sbjct: 43 EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL 102
Query: 228 SSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISD 287
L+ + +++ I E L Y+ K NI + E +I D
Sbjct: 103 YDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDL---KPMNIFIDESRNVKIGD 159
Query: 288 FGLAK--------------WLP---DNWSHHIVFPIEGTFGYLSPEYF-MHGIVDEKTDV 329
FGLAK LP DN + I GT Y++ E G +EK D+
Sbjct: 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI-----GTAMYVATEVLDGTGHYNEKIDM 214
Query: 330 FAFGVLLLELI 340
++ G++ E+I
Sbjct: 215 YSLGIIFFEMI 225
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 17/176 (9%)
Query: 189 LSELGIVAHIN-HPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKI 246
L E+ I+ ++ HPN +L + T F LV + G L L E R KI
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-KI 129
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL-PDNWSHHIVFP 305
+ L+ + K NILL +D +++DFG + L P +
Sbjct: 130 MRAL---LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC-- 184
Query: 306 IEGTFGYLSPEYFMHGIVD------EKTDVFAFGVLLLELITGRRAVDSRRQSLVI 355
GT YL+PE + D ++ D+++ GV++ L+ G R+Q L++
Sbjct: 185 --GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 238
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 7/141 (4%)
Query: 201 PNAAKLIGFSTENGFHLVLQFLPHGSLSSLLFGST-ECLEWTIRYKIALGIAEGLQYLXX 259
P +K S + ++F G+L + E L+ + ++ I +G+ Y+
Sbjct: 95 PENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS 154
Query: 260 XXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFM 319
K SNI L + + +I DFGL L ++ +GT Y+SPE
Sbjct: 155 KKLIHRDL---KPSNIFLVDTKQVKIGDFGLVTSLKNDGKRT---RSKGTLRYMSPEQIS 208
Query: 320 HGIVDEKTDVFAFGVLLLELI 340
++ D++A G++L EL+
Sbjct: 209 SQDYGKEVDLYALGLILAELL 229
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 15/175 (8%)
Query: 189 LSELGIVAHIN-HPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKI 246
L E+ I+ ++ HPN +L + T F LV + G L L E R KI
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-KI 129
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPI 306
+ L+ + K NILL +D +++DFG + L + +
Sbjct: 130 MRAL---LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LRSV 183
Query: 307 EGTFGYLSPEYFMHGIVD------EKTDVFAFGVLLLELITGRRAVDSRRQSLVI 355
GT YL+PE + D ++ D+++ GV++ L+ G R+Q L++
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 238
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 238 LEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN 297
LE I Y + +A+G+++L A NILLSE +I DFGLA+ + +
Sbjct: 199 LEHLICY--SFQVAKGMEFLASRKCIHRDLA---ARNILLSEKNVVKICDFGLARDIYKD 253
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ +++PE + ++DV++FGVLL E+ +
Sbjct: 254 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 238 LEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN 297
LE I Y + +A+G+++L A NILLSE +I DFGLA+ + +
Sbjct: 197 LEHLICY--SFQVAKGMEFLASRKCIHRDLA---ARNILLSEKNVVKICDFGLARDIYKD 251
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ +++PE + ++DV++FGVLL E+ +
Sbjct: 252 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 238 LEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN 297
LE I Y + +A+G+++L A NILLSE +I DFGLA+ + +
Sbjct: 192 LEHLICY--SFQVAKGMEFLASRKCIHRDLA---ARNILLSEKNVVKICDFGLARDIYKD 246
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ +++PE + ++DV++FGVLL E+ +
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 238 LEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDN 297
LE I Y + +A+G+++L A NILLSE +I DFGLA+ + +
Sbjct: 190 LEHLICY--SFQVAKGMEFLASRKCIHRDLA---ARNILLSEKNVVKICDFGLARDIYKD 244
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ +++PE + ++DV++FGVLL E+ +
Sbjct: 245 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 7/163 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
++ ++ ++E ++ + HP L F T + V+++ G L L E
Sbjct: 49 KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE 108
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K N++L +D +I+DFGL K + +
Sbjct: 109 RARFYGA-EIVSALEYLHSRDVVYRDI---KLENLMLDKDGHIKITDFGLCKEGISDGAT 164
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
F GT YL+PE D + GV++ E++ GR
Sbjct: 165 MKTFC--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 89/221 (40%), Gaps = 35/221 (15%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPN-----AA 204
+GKG + EV++G GE + R +EL + H N A+
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFR----ETELYNTVMLRHENILGFIAS 70
Query: 205 KLIGFSTENGFHLVLQFLPHGSLSSLL----FGSTECLEWTIRYKIALGIAEGLQYLX-- 258
+ + L+ + GSL L + CL +I L IA GL +L
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL------RIVLSIASGLAHLHIE 124
Query: 259 ---XXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV--FPIEGTFGYL 313
K+ NIL+ ++ + I+D GLA + + V P GT Y+
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 314 SPEYFMHGI-VD-----EKTDVFAFGVLLLELITGRRAVDS 348
+PE I VD ++ D++AFG++L E+ RR V +
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSN 223
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 7/163 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
++ ++ ++E ++ + HP L F T + V+++ G L L E
Sbjct: 46 KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE 105
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K N++L +D +I+DFGL K + +
Sbjct: 106 RARFYGA-EIVSALEYLHSRDVVYRDI---KLENLMLDKDGHIKITDFGLCKEGISDGAT 161
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
F GT YL+PE D + GV++ E++ GR
Sbjct: 162 MKTFC--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 21/170 (12%)
Query: 245 KIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVF 304
KIA+ I + L++L K SN+L++ + + DFG++ +L D+ + I
Sbjct: 140 KIAVSIVKALEHLHSKLSVIHRDV--KPSNVLINALGQVKXCDFGISGYLVDDVAKDI-- 195
Query: 305 PIEGTFGYLSPEYFMHGIVDE----KTDVFAFGVLLLELITGRRAVDSRRQSLVIWAKPL 360
G Y +PE + + K+D+++ G+ +EL R DS W P
Sbjct: 196 -DAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDS-------WGTPF 247
Query: 361 LQTSNFKELVDPRL-ADAYDLAEMKRAMLTASVCIHHLSTMRPQMTRVLQ 409
Q E P+L AD + AE + S C+ S RP + Q
Sbjct: 248 QQLKQVVEEPSPQLPADKFS-AEF---VDFTSQCLKKNSKERPTYPELXQ 293
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 11/160 (6%)
Query: 188 FLSELGIVAHINHPNAAKLI-GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKI 246
F E I+A N P +L F + ++V++++P G L +L+ +W Y
Sbjct: 116 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFY-- 173
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPI 306
AE + L K N+LL + +++DFG + +
Sbjct: 174 ---TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 230
Query: 307 EGTFGYLSPEYFM----HGIVDEKTDVFAFGVLLLELITG 342
GT Y+SPE G + D ++ GV L E++ G
Sbjct: 231 -GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 7/163 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
++ ++ ++E ++ + HP L F T + V+++ G L L E
Sbjct: 46 KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE 105
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K N++L +D +I+DFGL K + +
Sbjct: 106 RARFYGA-EIVSALEYLHSRDVVYRDI---KLENLMLDKDGHIKITDFGLCKEGISDGAT 161
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
F GT YL+PE D + GV++ E++ GR
Sbjct: 162 MKTFC--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 11/160 (6%)
Query: 188 FLSELGIVAHINHPNAAKLI-GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKI 246
F E I+A N P +L F + ++V++++P G L +L+ +W Y
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFY-- 178
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPI 306
AE + L K N+LL + +++DFG + +
Sbjct: 179 ---TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 235
Query: 307 EGTFGYLSPEYFM----HGIVDEKTDVFAFGVLLLELITG 342
GT Y+SPE G + D ++ GV L E++ G
Sbjct: 236 -GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 89/221 (40%), Gaps = 35/221 (15%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPN-----AA 204
+GKG + EV++G GE + R +EL + H N A+
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFR----ETELYNTVMLRHENILGFIAS 70
Query: 205 KLIGFSTENGFHLVLQFLPHGSLSSLL----FGSTECLEWTIRYKIALGIAEGLQYLX-- 258
+ + L+ + GSL L + CL +I L IA GL +L
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL------RIVLSIASGLAHLHIE 124
Query: 259 ---XXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV--FPIEGTFGYL 313
K+ NIL+ ++ + I+D GLA + + V P GT Y+
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 314 SPEYFMHGI-VD-----EKTDVFAFGVLLLELITGRRAVDS 348
+PE I VD ++ D++AFG++L E+ RR V +
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSN 223
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 11/160 (6%)
Query: 188 FLSELGIVAHINHPNAAKLI-GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKI 246
F E I+A N P +L F + ++V++++P G L +L+ +W Y
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFY-- 178
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPI 306
AE + L K N+LL + +++DFG + +
Sbjct: 179 ---TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV 235
Query: 307 EGTFGYLSPEYFM----HGIVDEKTDVFAFGVLLLELITG 342
GT Y+SPE G + D ++ GV L E++ G
Sbjct: 236 -GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 7/163 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
++ ++ ++E ++ + HP L F T + V+++ G L L E
Sbjct: 51 KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE 110
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K N++L +D +I+DFGL K + +
Sbjct: 111 RARFYGA-EIVSALEYLHSRDVVYRDI---KLENLMLDKDGHIKITDFGLCKEGISDGAT 166
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
F GT YL+PE D + GV++ E++ GR
Sbjct: 167 MKXFC--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 71/162 (43%), Gaps = 8/162 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
++R +E+ I+ H N ++ + + +V++FL G+L+ ++ + E
Sbjct: 189 QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE- 247
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+IA LQ L K+ +ILL+ D ++SDFG +
Sbjct: 248 ----QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 303
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ GT +++PE + D+++ G++++E++ G
Sbjct: 304 RKX--LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 343
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGI-VDEKTDV 329
K SN+ ++ED E +I DFGLA+ + + ++ T Y +PE ++ + ++ D+
Sbjct: 150 KPSNVAVNEDCELRILDFGLARQADEEMTGYV-----ATRWYRAPEIMLNWMHYNQTVDI 204
Query: 330 FAFGVLLLELITGR 343
++ G ++ EL+ G+
Sbjct: 205 WSVGCIMAELLQGK 218
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 7/163 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
++ ++ ++E ++ + HP L F T + V+++ G L L E
Sbjct: 46 KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE 105
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K N++L +D +I+DFGL K + +
Sbjct: 106 RARFYGA-EIVSALEYLHSRDVVYRDI---KLENLMLDKDGHIKITDFGLCKEGISDGAT 161
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
F GT YL+PE D + GV++ E++ GR
Sbjct: 162 MKXFC--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 189 LSELGIVAHINHPNAAKLI-GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIA 247
L E+ ++ ++HPN L+ F ++ LV F+ L ++ ++ L +
Sbjct: 60 LREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYM 118
Query: 248 LGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL--PDN-WSHHIVF 304
L +GL+YL K +N+LL E+ +++DFGLAK P+ + H +V
Sbjct: 119 LMTLQGLEYLHQHWILHRDL---KPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV- 174
Query: 305 PIEGTFGYLSPEYF----MHGIVDEKTDVFAFGVLLLELI 340
T Y +PE M+G+ D++A G +L EL+
Sbjct: 175 ----TRWYRAPELLFGARMYGV---GVDMWAVGCILAELL 207
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 7/163 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
++ ++ ++E ++ + HP L F T + V+++ G L L E
Sbjct: 46 KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE 105
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K N++L +D +I+DFGL K + +
Sbjct: 106 RARFYGA-EIVSALEYLHSRDVVYRDI---KLENLMLDKDGHIKITDFGLCKEGISDGAT 161
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
F GT YL+PE D + GV++ E++ GR
Sbjct: 162 MKXFC--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 71/162 (43%), Gaps = 8/162 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
++R +E+ I+ H N ++ + + +V++FL G+L+ ++ + E
Sbjct: 67 QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE- 125
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+IA LQ L K+ +ILL+ D ++SDFG +
Sbjct: 126 ----QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 181
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ GT +++PE + D+++ G++++E++ G
Sbjct: 182 RKX--LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 7/163 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
++ ++ ++E ++ + HP L F T + V+++ G L L E
Sbjct: 46 KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE 105
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L+YL K N++L +D +I+DFGL K + +
Sbjct: 106 RARFYGA-EIVSALEYLHSRDVVYRDI---KLENLMLDKDGHIKITDFGLCKEGISDGAT 161
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
F GT YL+PE D + GV++ E++ GR
Sbjct: 162 MKXFC--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGI-VDEKTDV 329
K SN+ ++ED E +I DFGLA+ + + ++ T Y +PE ++ + ++ D+
Sbjct: 158 KPSNVAVNEDSELRILDFGLARQADEEMTGYV-----ATRWYRAPEIMLNWMHYNQTVDI 212
Query: 330 FAFGVLLLELITGR 343
++ G ++ EL+ G+
Sbjct: 213 WSVGCIMAELLQGK 226
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 89/221 (40%), Gaps = 35/221 (15%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPN-----AA 204
+GKG + EV++G GE + R +EL + H N A+
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFR----ETELYNTVMLRHENILGFIAS 99
Query: 205 KLIGFSTENGFHLVLQFLPHGSLSSLL----FGSTECLEWTIRYKIALGIAEGLQYLX-- 258
+ + L+ + GSL L + CL +I L IA GL +L
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCL------RIVLSIASGLAHLHIE 153
Query: 259 ---XXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIV--FPIEGTFGYL 313
K+ NIL+ ++ + I+D GLA + + V P GT Y+
Sbjct: 154 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 213
Query: 314 SPEYFMHGI-VD-----EKTDVFAFGVLLLELITGRRAVDS 348
+PE I VD ++ D++AFG++L E+ RR V +
Sbjct: 214 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSN 252
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 71/162 (43%), Gaps = 8/162 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
++R +E+ I+ H N ++ + + +V++FL G+L+ ++ + E
Sbjct: 69 QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE- 127
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+IA LQ L K+ +ILL+ D ++SDFG +
Sbjct: 128 ----QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 183
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ GT +++PE + D+++ G++++E++ G
Sbjct: 184 RKX--LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 71/162 (43%), Gaps = 8/162 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
++R +E+ I+ H N ++ + + +V++FL G+L+ ++ + E
Sbjct: 112 QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE- 170
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+IA LQ L K+ +ILL+ D ++SDFG +
Sbjct: 171 ----QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 226
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ GT +++PE + D+++ G++++E++ G
Sbjct: 227 RKX--LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGI-VDEKTDV 329
K SN+ ++ED E +I DFGLA+ + + ++ T Y +PE ++ + ++ D+
Sbjct: 158 KPSNVAVNEDSELRILDFGLARQADEEMTGYV-----ATRWYRAPEIMLNWMHYNQTVDI 212
Query: 330 FAFGVLLLELITGR 343
++ G ++ EL+ G+
Sbjct: 213 WSVGCIMAELLQGK 226
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL-PDNWSHHIVF 304
I + IAE +++L K SNI + D ++ DFGL + D ++
Sbjct: 169 IFIQIAEAVEFLHSKGLMHRDL---KPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 305 PIE---------GTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELI 340
P+ GT Y+SPE K D+F+ G++L EL+
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 63/167 (37%), Gaps = 20/167 (11%)
Query: 191 ELGIVAHINHPNAAK-------LIGFSTENGFHLVLQFLPHGSLSSLLFGSTECL---EW 240
E+ I+ +NHPN L + + L +++ G L L C E
Sbjct: 63 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG 122
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEA---QISDFGLAKWLPDN 297
IR ++ I+ L+YL K NI+L + +I D G AK L
Sbjct: 123 PIRTLLS-DISSALRYLHENRIIHRDL---KPENIVLQPGPQRLIHKIIDLGYAKELDQG 178
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
+ GT YL+PE D ++FG L E ITG R
Sbjct: 179 ---ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 63/167 (37%), Gaps = 20/167 (11%)
Query: 191 ELGIVAHINHPNAAK-------LIGFSTENGFHLVLQFLPHGSLSSLLFGSTECL---EW 240
E+ I+ +NHPN L + + L +++ G L L C E
Sbjct: 62 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG 121
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEA---QISDFGLAKWLPDN 297
IR ++ I+ L+YL K NI+L + +I D G AK L
Sbjct: 122 PIRTLLS-DISSALRYLHENRIIHRDL---KPENIVLQPGPQRLIHKIIDLGYAKELDQG 177
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRR 344
+ GT YL+PE D ++FG L E ITG R
Sbjct: 178 ---ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 6/163 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
++ ++ L+E ++ + HP L F T + V+++ G L L E
Sbjct: 189 KDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED 248
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L YL K N++L +D +I+DFGL K + +
Sbjct: 249 RARFYGA-EIVSALDYLHSEKNVVYRDL--KLENLMLDKDGHIKITDFGLCKEGIKDGAT 305
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
F GT YL+PE D + GV++ E++ GR
Sbjct: 306 MKTFC--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 6/163 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
++ ++ L+E ++ + HP L F T + V+++ G L L E
Sbjct: 192 KDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED 251
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L YL K N++L +D +I+DFGL K + +
Sbjct: 252 RARFYGA-EIVSALDYLHSEKNVVYRDL--KLENLMLDKDGHIKITDFGLCKEGIKDGAT 308
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
F GT YL+PE D + GV++ E++ GR
Sbjct: 309 MKTFC--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ N+ ++ P T Y +PE + E D++
Sbjct: 151 KPSNIVVKSDCTLKILDFGLARTASTNF---MMTPYVVTRYYRAPEVILGMGYKENVDIW 207
Query: 331 AFGVLLLELITG 342
+ G ++ EL+ G
Sbjct: 208 SVGCIMGELVKG 219
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 71/162 (43%), Gaps = 8/162 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
++R +E+ I+ H N ++ + + +V++FL G+L+ ++ + E
Sbjct: 58 QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE- 116
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+IA LQ L K+ +ILL+ D ++SDFG +
Sbjct: 117 ----QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 172
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ GT +++PE + D+++ G++++E++ G
Sbjct: 173 RKX--LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 71/162 (43%), Gaps = 8/162 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
++R +E+ I+ H N ++ + + +V++FL G+L+ ++ + E
Sbjct: 62 QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE- 120
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+IA LQ L K+ +ILL+ D ++SDFG +
Sbjct: 121 ----QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR 176
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ GT +++PE + D+++ G++++E++ G
Sbjct: 177 RKX--LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 87/208 (41%), Gaps = 14/208 (6%)
Query: 140 ATDNFNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDF-LSELGIVAHI 198
+ + + + L+G+G + V K C +D++ + + E+ ++ +
Sbjct: 23 SMEKYENLGLVGEGSYGMVMK-CRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 199 NHPNAAKLIGFSTENG-FHLVLQFLPHGSLSSL-LFGSTECLEWTIRYKIALGIAEGLQY 256
H N L+ + ++LV +F+ H L L LF + L++ + K I G+ +
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG--LDYQVVQKYLFQIINGIGF 139
Query: 257 LXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE-GTFGYLSP 315
K NIL+S+ ++ DFG A+ L V+ E T Y +P
Sbjct: 140 CHSHNIIHRDI---KPENILVSQSGVVKLCDFGFARTLAAPGE---VYDDEVATRWYRAP 193
Query: 316 EYFMHGI-VDEKTDVFAFGVLLLELITG 342
E + + + DV+A G L+ E+ G
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 13/92 (14%)
Query: 271 KASNILLSE---DYEAQISDFGLAKWLP-DNWSHHIVFPIEG---TFGYLSPEYFMHGIV 323
K N+L ++ + E +I DFG A+ P DN P++ T Y +PE
Sbjct: 133 KPENLLFTDENDNLEIKIIDFGFARLKPPDNQ------PLKTPCFTLHYAAPELLNQNGY 186
Query: 324 DEKTDVFAFGVLLLELITGRRAVDSRRQSLVI 355
DE D+++ GV+L +++G+ S +SL
Sbjct: 187 DESCDLWSLGVILYTMLSGQVPFQSHDRSLTC 218
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 12/159 (7%)
Query: 188 FLSELGIVAHINHPNAAKLIGF-STENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKI 246
L E+ ++ ++HPN KL F + ++LV++ G L + + E I
Sbjct: 51 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-I 109
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILL---SEDYEAQISDFGLAKWLPDNWSHHIV 303
+ G YL K N+LL S D +I DFGL+
Sbjct: 110 MKQVLSGTTYLHKHNIVHRDL---KPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER 166
Query: 304 FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
GT Y++PE + DEK DV++ GV+L L+ G
Sbjct: 167 L---GTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 245 KIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVF 304
K+ + I + L YL K SNILL E + ++ DFG++ L D+ +
Sbjct: 128 KMTVAIVKALYYLKEKHGVIHRDV--KPSNILLDERGQIKLCDFGISGRLVDDKAKDRS- 184
Query: 305 PIEGTFGYLSPEYF-----MHGIVDEKTDVFAFGVLLLELITGR 343
G Y++PE D + DV++ G+ L+EL TG+
Sbjct: 185 --AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 12/159 (7%)
Query: 188 FLSELGIVAHINHPNAAKLIGF-STENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKI 246
L E+ ++ ++HPN KL F + ++LV++ G L + + E I
Sbjct: 68 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-I 126
Query: 247 ALGIAEGLQYLXXXXXXXXXXXXXKASNILL---SEDYEAQISDFGLAKWLPDNWSHHIV 303
+ G YL K N+LL S D +I DFGL+
Sbjct: 127 MKQVLSGTTYLHKHNIVHRDL---KPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKER 183
Query: 304 FPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
GT Y++PE + DEK DV++ GV+L L+ G
Sbjct: 184 L---GTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 72/175 (41%), Gaps = 26/175 (14%)
Query: 186 SDFLSELGIVAHINHPNAAKLIGFSTEN-GFHLVLQFLPHGSL----------SSLLFGS 234
DF E ++ + H + + G TE +V +++ HG L + LL G
Sbjct: 59 QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGG 118
Query: 235 TEC----LEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGL 290
+ L +A +A G+ YL N L+ + +I DFG+
Sbjct: 119 EDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLA---TRNCLVGQGLVVKIGDFGM 175
Query: 291 AKWLPDNWSHHI----VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
++ + + + + PI ++ PE ++ ++DV++FGV+L E+ T
Sbjct: 176 SRDIYSTDYYRVGGRTMLPIR----WMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 72/175 (41%), Gaps = 26/175 (14%)
Query: 186 SDFLSELGIVAHINHPNAAKLIGFSTEN-GFHLVLQFLPHGSL----------SSLLFGS 234
DF E ++ + H + + G TE +V +++ HG L + LL G
Sbjct: 65 QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGG 124
Query: 235 TEC----LEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGL 290
+ L +A +A G+ YL N L+ + +I DFG+
Sbjct: 125 EDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLA---TRNCLVGQGLVVKIGDFGM 181
Query: 291 AKWLPDNWSHHI----VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
++ + + + + PI ++ PE ++ ++DV++FGV+L E+ T
Sbjct: 182 SRDIYSTDYYRVGGRTMLPIR----WMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 71/181 (39%), Gaps = 47/181 (25%)
Query: 198 INHPNAAKLIGFST-ENGFH----LVLQFLPHGSLSSLL--------FGSTECLEWTIRY 244
NHPN +L+ + E G L+L F G+L + + F + + + W +
Sbjct: 83 FNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLL-- 140
Query: 245 KIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVF 304
LGI GL+ + K +NILL ++ + + D G
Sbjct: 141 ---LGICRGLEAIHAKGYAHRDL---KPTNILLGDEGQPVLMDLGSMN--------QACI 186
Query: 305 PIEG---------------TFGYLSPEYFM---HGIVDEKTDVFAFGVLLLELITGRRAV 346
+EG T Y +PE F H ++DE+TDV++ G +L ++ G
Sbjct: 187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY 246
Query: 347 D 347
D
Sbjct: 247 D 247
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 11/152 (7%)
Query: 199 NHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYL 257
NHP L F TE+ V++++ G L + + E R+ A I+ L YL
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYL 137
Query: 258 XXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAK--WLPDNWSHHIVFPIEGTFGYLSP 315
K N+LL + +++D+G+ K P + + GT Y++P
Sbjct: 138 HERGIIYRDL---KLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC----GTPNYIAP 190
Query: 316 EYFMHGIVDEKTDVFAFGVLLLELITGRRAVD 347
E D +A GVL+ E++ GR D
Sbjct: 191 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 72/174 (41%), Gaps = 26/174 (14%)
Query: 187 DFLSELGIVAHINHPNAAKLIGFSTEN-GFHLVLQFLPHGSL----------SSLLFGST 235
DF E ++ + H + + G TE +V +++ HG L + LL G
Sbjct: 89 DFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGE 148
Query: 236 EC----LEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLA 291
+ L +A +A G+ YL N L+ + +I DFG++
Sbjct: 149 DVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLA---TRNCLVGQGLVVKIGDFGMS 205
Query: 292 KWLPDNWSHHI----VFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ + + + + PI ++ PE ++ ++DV++FGV+L E+ T
Sbjct: 206 RDIYSTDYYRVGGRTMLPIR----WMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 11/152 (7%)
Query: 199 NHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYL 257
NHP L F TE+ V++++ G L + + E R+ A I+ L YL
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYL 122
Query: 258 XXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAK--WLPDNWSHHIVFPIEGTFGYLSP 315
K N+LL + +++D+G+ K P + + GT Y++P
Sbjct: 123 HERGIIYRDL---KLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC----GTPNYIAP 175
Query: 316 EYFMHGIVDEKTDVFAFGVLLLELITGRRAVD 347
E D +A GVL+ E++ GR D
Sbjct: 176 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 11/152 (7%)
Query: 199 NHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYL 257
NHP L F TE+ V++++ G L + + E R+ A I+ L YL
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYL 126
Query: 258 XXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAK--WLPDNWSHHIVFPIEGTFGYLSP 315
K N+LL + +++D+G+ K P + + GT Y++P
Sbjct: 127 HERGIIYRDL---KLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC----GTPNYIAP 179
Query: 316 EYFMHGIVDEKTDVFAFGVLLLELITGRRAVD 347
E D +A GVL+ E++ GR D
Sbjct: 180 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 155 KPSNIVVKSDCTLKILDFGLARTAGTSF---MMVPFVVTRYYRAPEVILGMGYKENVDIW 211
Query: 331 AFGVLLLELITG 342
+ G ++ E+I G
Sbjct: 212 SVGCIMGEMIKG 223
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 11/152 (7%)
Query: 199 NHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYL 257
NHP L F TE+ V++++ G L + + E R+ A I+ L YL
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYL 169
Query: 258 XXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAK--WLPDNWSHHIVFPIEGTFGYLSP 315
K N+LL + +++D+G+ K P + + GT Y++P
Sbjct: 170 HERGIIYRDL---KLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC----GTPNYIAP 222
Query: 316 EYFMHGIVDEKTDVFAFGVLLLELITGRRAVD 347
E D +A GVL+ E++ GR D
Sbjct: 223 EILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 6/163 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
++ ++ L+E ++ + HP L F T + V+++ G L L E
Sbjct: 51 KDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED 110
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L YL K N++L +D +I+DFGL K + +
Sbjct: 111 RARFYGA-EIVSALDYLHSEKNVVYRDL--KLENLMLDKDGHIKITDFGLCKEGIKDGAT 167
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
F GT YL+PE D + GV++ E++ GR
Sbjct: 168 MKXFC--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 6/163 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
++ ++ L+E ++ + HP L F T + V+++ G L L E
Sbjct: 50 KDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED 109
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L YL K N++L +D +I+DFGL K + +
Sbjct: 110 RARFYGA-EIVSALDYLHSEKNVVYRDL--KLENLMLDKDGHIKITDFGLCKEGIKDGAT 166
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
F GT YL+PE D + GV++ E++ GR
Sbjct: 167 MKXFC--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 153 KPSNIVVKSDATLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 331 AFGVLLLELITG 342
+ GV++ E+I G
Sbjct: 210 SVGVIMGEMIKG 221
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 15/166 (9%)
Query: 185 ISDFLSELGIVAHINHPNAAKLIGF---STENGFHLVLQFLPHGSLSSLLFGSTECL-EW 240
I E+ I+ ++HPN KL+ E+ ++V + + G + + + + L E
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV--PTLKPLSED 137
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ + +G++YL K SN+L+ ED +I+DFG++ S
Sbjct: 138 QARFYFQ-DLIKGIEYLHYQKIIHRDI---KPSNLLVGEDGHIKIADFGVSNEF--KGSD 191
Query: 301 HIVFPIEGTFGYLSPEYF--MHGIVDEKT-DVFAFGVLLLELITGR 343
++ GT +++PE I K DV+A GV L + G+
Sbjct: 192 ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 153 KPSNIVVKSDATLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 331 AFGVLLLELITG 342
+ GV++ E+I G
Sbjct: 210 SVGVIMGEMIKG 221
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 6/163 (3%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL-IGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
++ ++ L+E ++ + HP L F T + V+++ G L L E
Sbjct: 49 KDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED 108
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
R+ A I L YL K N++L +D +I+DFGL K + +
Sbjct: 109 RARFYGA-EIVSALDYLHSEKNVVYRDL--KLENLMLDKDGHIKITDFGLCKEGIKDGAT 165
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGR 343
F GT YL+PE D + GV++ E++ GR
Sbjct: 166 MKXFC--GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 21/165 (12%)
Query: 187 DFLSELGIVAHINHPNAAKLIG-FSTENGFH--LVLQFLPHGSLSSLLF-GSTECLEWTI 242
DF E + +HPN ++G + H L+ ++P+GSL ++L G+ ++ +
Sbjct: 53 DFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQ 112
Query: 243 RYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI 302
K AL +A G+ +L S +++ ED A+IS +
Sbjct: 113 AVKFALDMARGMAFLHTLEPLIPRHALNSRS-VMIDEDMTARISMADVK----------F 161
Query: 303 VFPIEGTF---GYLSPEYFMHGIVD---EKTDVFAFGVLLLELIT 341
F G +++PE D D+++F VLL EL+T
Sbjct: 162 SFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT 206
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 76/191 (39%), Gaps = 40/191 (20%)
Query: 182 EERISDFLSELGIVAHINHPNAAK--------------LIGFSTENGFHLVLQFLPHGSL 227
EE++S LSE+ ++A +NH + + ++ + +++ + +L
Sbjct: 43 EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTL 102
Query: 228 SSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISD 287
L+ + +++ I E L Y+ K NI + E +I D
Sbjct: 103 YDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDL---KPMNIFIDESRNVKIGD 159
Query: 288 FGLAK--------------WLP---DNWSHHIVFPIEGTFGYLSPEYF-MHGIVDEKTDV 329
FGLAK LP DN + I GT Y++ E G +EK D+
Sbjct: 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI-----GTAMYVATEVLDGTGHYNEKIDM 214
Query: 330 FAFGVLLLELI 340
++ G++ E+I
Sbjct: 215 YSLGIIFFEMI 225
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 12/82 (14%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE-----GTFGYLSPEYFMHGIVDE 325
K N++L + +I+DFG+ K H++ + GT Y++PE + +
Sbjct: 147 KLDNVMLDSEGHIKIADFGMCK-------EHMMDGVTTREFCGTPDYIAPEIIAYQPYGK 199
Query: 326 KTDVFAFGVLLLELITGRRAVD 347
D +A+GVLL E++ G+ D
Sbjct: 200 SVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 103/246 (41%), Gaps = 36/246 (14%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
+G GG+ V+ D + D + + L E+ I+ ++H N K+
Sbjct: 19 LGCGGNGLVFSAV--DNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEI 76
Query: 210 STENGFHLVLQFLPHGSLSSL--LFGSTECLEWTIRYKIALG-------------IAEGL 254
+G L GSL+ L ++ E +E + + G + GL
Sbjct: 77 LGPSGSQLTDDV---GSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGL 133
Query: 255 QYLXXXXXXXXXXXXXKASNILL-SEDYEAQISDFGLAKWLPDNWSH--HIVFPIEG--T 309
+Y+ K +N+ + +ED +I DFGLA+ + ++SH H+ EG T
Sbjct: 134 KYIHSANVLHRDL---KPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS---EGLVT 187
Query: 310 FGYLSPEYFMH-GIVDEKTDVFAFGVLLLELITGRR----AVDSRRQSLVIWAKPLLQTS 364
Y SP + + D++A G + E++TG+ A + + L++ + P++
Sbjct: 188 KWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEE 247
Query: 365 NFKELV 370
+ +EL+
Sbjct: 248 DRQELL 253
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 71/162 (43%), Gaps = 8/162 (4%)
Query: 182 EERISDFLSELGIVAHINHPNAAKLI-GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEW 240
++R +E+ I+ H N ++ + ++++FL G+L+ ++ E
Sbjct: 83 QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEE- 141
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSH 300
+IA LQ L K+ +ILL+ D ++SDFG + +
Sbjct: 142 ----QIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK 197
Query: 301 HIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+ GT +++PE + + D+++ G++++E++ G
Sbjct: 198 RKX--LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHI-VFPIEGTFGYLSPEYFMHGIVDEKTDV 329
K NIL++ +++DFGLA+ +S+ + +FP+ T Y +PE + D+
Sbjct: 139 KPENILVTSGGTVKLADFGLARI----YSYQMALFPVVVTLWYRAPEVLLQSTYATPVDM 194
Query: 330 FAFGVLLLELI 340
++ G + E+
Sbjct: 195 WSVGCIFAEMF 205
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 331 AFGVLLLELITG 342
+ G ++ E+I G
Sbjct: 210 SVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 154 KPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIW 210
Query: 331 AFGVLLLELITG 342
+ G ++ E+I G
Sbjct: 211 SVGCIMGEMIKG 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 331 AFGVLLLELITG 342
+ G ++ E+I G
Sbjct: 210 SVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 331 AFGVLLLELITG 342
+ G ++ E+I G
Sbjct: 210 SVGCIMGEMIKG 221
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 87/212 (41%), Gaps = 33/212 (15%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
IGKG EV++G E EER +E+ + H N ++GF
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHEN---ILGF 63
Query: 210 ----STENG----FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXX 261
+ +NG LV + HGSL L T +E I K+AL A GL +L
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLALSTASGLAHLHMEI 121
Query: 262 XXXX-----XXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI-VFPIE--GTFGYL 313
K+ NIL+ ++ I+D GLA D+ + I + P GT Y+
Sbjct: 122 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV-RHDSATDTIDIAPNHRVGTKRYM 180
Query: 314 SPEYF------MHGIVDEKTDVFAFGVLLLEL 339
+PE H ++ D++A G++ E+
Sbjct: 181 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 153 KPSNIVVKSDATLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 331 AFGVLLLELITG 342
+ G ++ E+I G
Sbjct: 210 SVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 153 KPSNIVVKSDATLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 331 AFGVLLLELITG 342
+ G ++ E+I G
Sbjct: 210 SVGCIMGEMIKG 221
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 87/212 (41%), Gaps = 33/212 (15%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
IGKG EV++G E EER +E+ + H N ++GF
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHEN---ILGF 62
Query: 210 ----STENG----FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXX 261
+ +NG LV + HGSL L T +E I K+AL A GL +L
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLALSTASGLAHLHMEI 120
Query: 262 XXXX-----XXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI-VFPIE--GTFGYL 313
K+ NIL+ ++ I+D GLA D+ + I + P GT Y+
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV-RHDSATDTIDIAPNHRVGTKRYM 179
Query: 314 SPEYF------MHGIVDEKTDVFAFGVLLLEL 339
+PE H ++ D++A G++ E+
Sbjct: 180 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 87/212 (41%), Gaps = 33/212 (15%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
IGKG EV++G E EER +E+ + H N ++GF
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHEN---ILGF 68
Query: 210 ----STENG----FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXX 261
+ +NG LV + HGSL L T +E I K+AL A GL +L
Sbjct: 69 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLALSTASGLAHLHMEI 126
Query: 262 XXXX-----XXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI-VFPIE--GTFGYL 313
K+ NIL+ ++ I+D GLA D+ + I + P GT Y+
Sbjct: 127 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV-RHDSATDTIDIAPNHRVGTKRYM 185
Query: 314 SPEYF------MHGIVDEKTDVFAFGVLLLEL 339
+PE H ++ D++A G++ E+
Sbjct: 186 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 90/234 (38%), Gaps = 34/234 (14%)
Query: 130 KNFDFAELAAATDNFNSENL--IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISD 187
K +D E + E L IG+G EV+K E E
Sbjct: 4 KQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT 63
Query: 188 FLSELGIVAHINHPNAAKLIGFS---------TENGFHLVLQFLPHGSLSSLLFGSTECL 238
L E+ I+ + H N LI + +LV F H L+ LL S +
Sbjct: 64 ALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLL--SNVLV 120
Query: 239 EWTIR--YKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL-- 294
++T+ ++ + GL Y+ KA+N+L++ D +++DFGLA+
Sbjct: 121 KFTLSEIKRVMQMLLNGLYYIHRNKILHRDM---KAANVLITRDGVLKLADFGLARAFSL 177
Query: 295 -----PDNWSHHIVFPIEGTFGYLSPEYFMHGIVD--EKTDVFAFGVLLLELIT 341
P+ + + +V T Y PE + G D D++ G ++ E+ T
Sbjct: 178 AKNSQPNRYXNRVV-----TLWYRPPELLL-GERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 87/212 (41%), Gaps = 33/212 (15%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
IGKG EV++G E EER +E+ + H N ++GF
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHEN---ILGF 65
Query: 210 ----STENG----FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXX 261
+ +NG LV + HGSL L T +E I K+AL A GL +L
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLALSTASGLAHLHMEI 123
Query: 262 XXXX-----XXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI-VFPIE--GTFGYL 313
K+ NIL+ ++ I+D GLA D+ + I + P GT Y+
Sbjct: 124 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV-RHDSATDTIDIAPNHRVGTKRYM 182
Query: 314 SPEYF------MHGIVDEKTDVFAFGVLLLEL 339
+PE H ++ D++A G++ E+
Sbjct: 183 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 87/212 (41%), Gaps = 33/212 (15%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
IGKG EV++G E EER +E+ + H N ++GF
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHEN---ILGF 88
Query: 210 ----STENG----FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXX 261
+ +NG LV + HGSL L T +E I K+AL A GL +L
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLALSTASGLAHLHMEI 146
Query: 262 XXXX-----XXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI-VFPIE--GTFGYL 313
K+ NIL+ ++ I+D GLA D+ + I + P GT Y+
Sbjct: 147 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV-RHDSATDTIDIAPNHRVGTKRYM 205
Query: 314 SPEYF------MHGIVDEKTDVFAFGVLLLEL 339
+PE H ++ D++A G++ E+
Sbjct: 206 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 153 KPSNIVVKSDATLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 331 AFGVLLLELITG 342
+ G ++ E+I G
Sbjct: 210 SVGCIMGEMIKG 221
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 87/212 (41%), Gaps = 33/212 (15%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
IGKG EV++G E EER +E+ + H N ++GF
Sbjct: 50 IGKGRFGEVWRGKWRGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHEN---ILGF 101
Query: 210 ----STENG----FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXX 261
+ +NG LV + HGSL L T +E I K+AL A GL +L
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLALSTASGLAHLHMEI 159
Query: 262 XXXX-----XXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI-VFPIE--GTFGYL 313
K+ NIL+ ++ I+D GLA D+ + I + P GT Y+
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV-RHDSATDTIDIAPNHRVGTKRYM 218
Query: 314 SPEYF------MHGIVDEKTDVFAFGVLLLEL 339
+PE H ++ D++A G++ E+
Sbjct: 219 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ N+ ++ P T Y +PE + D++
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTACTNF---MMTPYVVTRYYRAPEVILGMGYAANVDIW 209
Query: 331 AFGVLLLELITG 342
+ G ++ EL+ G
Sbjct: 210 SVGCIMGELVKG 221
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 82/200 (41%), Gaps = 17/200 (8%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
+G+G +A VYKG + E+ + + E+ ++ + H N L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTA-IREVSLLKDLKHANIVTLHDI 68
Query: 210 -STENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXX 268
TE LV ++L L +C + + L + + L+ L
Sbjct: 69 IHTEKSLTLVFEYLDKDLKQYL----DDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHR 124
Query: 269 XXKASNILLSEDYEAQISDFGL--AKWLP-DNWSHHIVFPIEGTFGYLSPEYFMHGIVDE 325
K N+L++E E +++DFGL AK +P + + +V T Y P+ + G D
Sbjct: 125 DLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-----TLWYRPPDILL-GSTDY 178
Query: 326 KT--DVFAFGVLLLELITGR 343
T D++ G + E+ TGR
Sbjct: 179 STQIDMWGVGCIFYEMATGR 198
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 90/234 (38%), Gaps = 34/234 (14%)
Query: 130 KNFDFAELAAATDNFNSENL--IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISD 187
K +D E + E L IG+G EV+K E E
Sbjct: 3 KQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT 62
Query: 188 FLSELGIVAHINHPNAAKLIGFS---------TENGFHLVLQFLPHGSLSSLLFGSTECL 238
L E+ I+ + H N LI + +LV F H L+ LL S +
Sbjct: 63 ALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLL--SNVLV 119
Query: 239 EWTIR--YKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL-- 294
++T+ ++ + GL Y+ KA+N+L++ D +++DFGLA+
Sbjct: 120 KFTLSEIKRVMQMLLNGLYYIHRNKILHRDM---KAANVLITRDGVLKLADFGLARAFSL 176
Query: 295 -----PDNWSHHIVFPIEGTFGYLSPEYFMHGIVD--EKTDVFAFGVLLLELIT 341
P+ + + +V T Y PE + G D D++ G ++ E+ T
Sbjct: 177 AKNSQPNRYXNRVV-----TLWYRPPELLL-GERDYGPPIDLWGAGCIMAEMWT 224
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 90/234 (38%), Gaps = 34/234 (14%)
Query: 130 KNFDFAELAAATDNFNSENL--IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISD 187
K +D E + E L IG+G EV+K E E
Sbjct: 4 KQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT 63
Query: 188 FLSELGIVAHINHPNAAKLIGFS---------TENGFHLVLQFLPHGSLSSLLFGSTECL 238
L E+ I+ + H N LI + +LV F H L+ LL S +
Sbjct: 64 ALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLL--SNVLV 120
Query: 239 EWTIR--YKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL-- 294
++T+ ++ + GL Y+ KA+N+L++ D +++DFGLA+
Sbjct: 121 KFTLSEIKRVMQMLLNGLYYIHRNKILHRDM---KAANVLITRDGVLKLADFGLARAFSL 177
Query: 295 -----PDNWSHHIVFPIEGTFGYLSPEYFMHGIVD--EKTDVFAFGVLLLELIT 341
P+ + + +V T Y PE + G D D++ G ++ E+ T
Sbjct: 178 AKNSQPNRYXNRVV-----TLWYRPPELLL-GERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGI----VDEK 326
K SNILL ++ DFG++ L D+ + G Y++PE D +
Sbjct: 153 KPSNILLDRSGNIKLCDFGISGQLVDSIAKT---RDAGCRPYMAPERIDPSASRQGYDVR 209
Query: 327 TDVFAFGVLLLELITGR 343
+DV++ G+ L EL TGR
Sbjct: 210 SDVWSLGITLYELATGR 226
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPEVVTRYYRAPEVILGMGYKENVDIW 209
Query: 331 AFGVLLLELITG 342
+ G ++ E+I G
Sbjct: 210 SVGCIMGEMIKG 221
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 90/234 (38%), Gaps = 34/234 (14%)
Query: 130 KNFDFAELAAATDNFNSENL--IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISD 187
K +D E + E L IG+G EV+K E E
Sbjct: 4 KQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT 63
Query: 188 FLSELGIVAHINHPNAAKLIGFS---------TENGFHLVLQFLPHGSLSSLLFGSTECL 238
L E+ I+ + H N LI + +LV F H L+ LL S +
Sbjct: 64 ALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLL--SNVLV 120
Query: 239 EWTIR--YKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWL-- 294
++T+ ++ + GL Y+ KA+N+L++ D +++DFGLA+
Sbjct: 121 KFTLSEIKRVMQMLLNGLYYIHRNKILHRDM---KAANVLITRDGVLKLADFGLARAFSL 177
Query: 295 -----PDNWSHHIVFPIEGTFGYLSPEYFMHGIVD--EKTDVFAFGVLLLELIT 341
P+ + + +V T Y PE + G D D++ G ++ E+ T
Sbjct: 178 AKNSQPNRYXNRVV-----TLWYRPPELLL-GERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 9/150 (6%)
Query: 200 HPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLX 258
HP+ KL ST + +V++++ G L + + E R ++ I G+ Y
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESR-RLFQQILSGVDYCH 133
Query: 259 XXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYF 318
K N+LL A+I+DFGL+ + D + G+ Y +PE
Sbjct: 134 RHMVVHRDL---KPENVLLDAHMNAKIADFGLSNMMSDG---EFLRXSCGSPNYAAPEVI 187
Query: 319 MHGI-VDEKTDVFAFGVLLLELITGRRAVD 347
+ + D+++ GV+L L+ G D
Sbjct: 188 SGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE--GTFGYLSPEYFMHGIVDEKT- 327
K SN+L++ + +I DFGLA+ + D H F E T Y +PE ++ K+
Sbjct: 171 KPSNLLINTTCDLKICDFGLAR-IADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSI 229
Query: 328 DVFAFGVLLLELITGR 343
D+++ G +L E+++ R
Sbjct: 230 DIWSVGCILAEMLSNR 245
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLL--FGSTECLEWTIRYKIA 247
E+ I++ + H N K++ F + F LV++ HGS L L+ + I
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVME--KHGSGLDLFAFIDRHPRLDEPLASYIF 136
Query: 248 LGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE 307
+ + YL K NI+++ED+ ++ DFG A +L + +
Sbjct: 137 RQLVSAVGYLRLKDIIHRDI---KDENIVIAEDFTIKLIDFGSAAYLERG---KLFYTFC 190
Query: 308 GTFGYLSPEYFM-HGIVDEKTDVFAFGVLLLELI 340
GT Y +PE M + + ++++ GV L L+
Sbjct: 191 GTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 9/150 (6%)
Query: 200 HPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLX 258
HP+ KL ST F +V++++ G L + E R ++ I + Y
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH 128
Query: 259 XXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYF 318
K N+LL A+I+DFGL+ + D + G+ Y +PE
Sbjct: 129 RHMVVHRDL---KPENVLLDAHMNAKIADFGLSNMMSDG---EFLRTSCGSPNYAAPEVI 182
Query: 319 MHGI-VDEKTDVFAFGVLLLELITGRRAVD 347
+ + D+++ GV+L L+ G D
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE--GTFGYLSPEYFMHGIVDEKT- 327
K SN+LL+ + +I DFGLA+ + D H F E T Y +PE ++ K+
Sbjct: 155 KPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 213
Query: 328 DVFAFGVLLLELITGR 343
D+++ G +L E+++ R
Sbjct: 214 DIWSVGCILAEMLSNR 229
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE--GTFGYLSPEYFMHGIVDEKT- 327
K SN+LL+ + +I DFGLA+ + D H F E T Y +PE ++ K+
Sbjct: 155 KPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 213
Query: 328 DVFAFGVLLLELITGR 343
D+++ G +L E+++ R
Sbjct: 214 DIWSVGCILAEMLSNR 229
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE--GTFGYLSPEYFMHGIVDEKT- 327
K SN+LL+ + +I DFGLA+ + D H F E T Y +PE ++ K+
Sbjct: 155 KPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 213
Query: 328 DVFAFGVLLLELITGR 343
D+++ G +L E+++ R
Sbjct: 214 DIWSVGCILAEMLSNR 229
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE--GTFGYLSPEYFMHGIVDEKT- 327
K SN+LL+ + +I DFGLA+ + D H F E T Y +PE ++ K+
Sbjct: 151 KPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 209
Query: 328 DVFAFGVLLLELITGR 343
D+++ G +L E+++ R
Sbjct: 210 DIWSVGCILAEMLSNR 225
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 9/150 (6%)
Query: 200 HPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLX 258
HP+ KL ST F +V++++ G L + E R ++ I + Y
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH 128
Query: 259 XXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYF 318
K N+LL A+I+DFGL+ + D + G+ Y +PE
Sbjct: 129 RHMVVHRDL---KPENVLLDAHMNAKIADFGLSNMMSDG---EFLRDSCGSPNYAAPEVI 182
Query: 319 MHGI-VDEKTDVFAFGVLLLELITGRRAVD 347
+ + D+++ GV+L L+ G D
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE--GTFGYLSPEYFMHGIVDEKT- 327
K SN+LL+ + +I DFGLA+ + D H F E T Y +PE ++ K+
Sbjct: 153 KPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 211
Query: 328 DVFAFGVLLLELITGR 343
D+++ G +L E+++ R
Sbjct: 212 DIWSVGCILAEMLSNR 227
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE--GTFGYLSPEYFMHGIVDEKT- 327
K SN+LL+ + +I DFGLA+ + D H F E T Y +PE ++ K+
Sbjct: 156 KPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 214
Query: 328 DVFAFGVLLLELITGR 343
D+++ G +L E+++ R
Sbjct: 215 DIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE--GTFGYLSPEYFMHGIVDEKT- 327
K SN+LL+ + +I DFGLA+ + D H F E T Y +PE ++ K+
Sbjct: 157 KPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 215
Query: 328 DVFAFGVLLLELITGR 343
D+++ G +L E+++ R
Sbjct: 216 DIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE--GTFGYLSPEYFMHGIVDEKT- 327
K SN+LL+ + +I DFGLA+ + D H F E T Y +PE ++ K+
Sbjct: 148 KPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 206
Query: 328 DVFAFGVLLLELITGR 343
D+++ G +L E+++ R
Sbjct: 207 DIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE--GTFGYLSPEYFMHGIVDEKT- 327
K SN+LL+ + +I DFGLA+ + D H F E T Y +PE ++ K+
Sbjct: 155 KPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 213
Query: 328 DVFAFGVLLLELITGR 343
D+++ G +L E+++ R
Sbjct: 214 DIWSVGCILAEMLSNR 229
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE--GTFGYLSPEYFMHGIVDEKT- 327
K SN+LL+ + +I DFGLA+ + D H F E T Y +PE ++ K+
Sbjct: 171 KPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 229
Query: 328 DVFAFGVLLLELITGR 343
D+++ G +L E+++ R
Sbjct: 230 DIWSVGCILAEMLSNR 245
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE--GTFGYLSPEYFMHGIVDEKT- 327
K SN+LL+ + +I DFGLA+ + D H F E T Y +PE ++ K+
Sbjct: 159 KPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 217
Query: 328 DVFAFGVLLLELITGR 343
D+++ G +L E+++ R
Sbjct: 218 DIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE--GTFGYLSPEYFMHGIVDEKT- 327
K SN+LL+ + +I DFGLA+ + D H F E T Y +PE ++ K+
Sbjct: 151 KPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 209
Query: 328 DVFAFGVLLLELITGR 343
D+++ G +L E+++ R
Sbjct: 210 DIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE--GTFGYLSPEYFMHGIVDEKT- 327
K SN+LL+ + +I DFGLA+ + D H F E T Y +PE ++ K+
Sbjct: 153 KPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 211
Query: 328 DVFAFGVLLLELITGR 343
D+++ G +L E+++ R
Sbjct: 212 DIWSVGCILAEMLSNR 227
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE--GTFGYLSPEYFMHGIVDEKT- 327
K SN+LL+ + +I DFGLA+ + D H F E T Y +PE ++ K+
Sbjct: 171 KPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 229
Query: 328 DVFAFGVLLLELITGR 343
D+++ G +L E+++ R
Sbjct: 230 DIWSVGCILAEMLSNR 245
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE--GTFGYLSPEYFMHGIVDEKT- 327
K SN+LL+ + +I DFGLA+ + D H F E T Y +PE ++ K+
Sbjct: 149 KPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 207
Query: 328 DVFAFGVLLLELITGR 343
D+++ G +L E+++ R
Sbjct: 208 DIWSVGCILAEMLSNR 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE--GTFGYLSPEYFMHGIVDEKT- 327
K SN+LL+ + +I DFGLA+ + D H F E T Y +PE ++ K+
Sbjct: 149 KPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 207
Query: 328 DVFAFGVLLLELITGR 343
D+++ G +L E+++ R
Sbjct: 208 DIWSVGCILAEMLSNR 223
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE--GTFGYLSPEYFMHGIVDEKT- 327
K SN+LL+ + +I DFGLA+ + D H F E T Y +PE ++ K+
Sbjct: 151 KPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 209
Query: 328 DVFAFGVLLLELITGR 343
D+++ G +L E+++ R
Sbjct: 210 DIWSVGCILAEMLSNR 225
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 271 KASNILLSEDYEAQISDFGLAKWL-PDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKT-D 328
K SN+LL+ + +I DFGLA+ PD+ + T Y +PE ++ K+ D
Sbjct: 155 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSID 214
Query: 329 VFAFGVLLLELITGR 343
+++ G +L E+++ R
Sbjct: 215 IWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 271 KASNILLSEDYEAQISDFGLAKWL-PDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKT-D 328
K SN+LL+ + +I DFGLA+ PD+ + T Y +PE ++ K+ D
Sbjct: 156 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSID 215
Query: 329 VFAFGVLLLELITGR 343
+++ G +L E+++ R
Sbjct: 216 IWSVGCILAEMLSNR 230
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE--GTFGYLSPEYFMHGIVDEKT- 327
K SN+LL+ + +I DFGLA+ + D H F E T Y +PE ++ K+
Sbjct: 155 KPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 213
Query: 328 DVFAFGVLLLELITGR 343
D+++ G +L E+++ R
Sbjct: 214 DIWSVGCILAEMLSNR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE--GTFGYLSPEYFMHGIVDEKT- 327
K SN+LL+ + +I DFGLA+ + D H F E T Y +PE ++ K+
Sbjct: 151 KPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 209
Query: 328 DVFAFGVLLLELITGR 343
D+++ G +L E+++ R
Sbjct: 210 DIWSVGCILAEMLSNR 225
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVF-PIEGTFGYLSPEYFMHGIVDEKTDV 329
K NIL++ +++DFGLA+ +S+ + P+ T Y +PE + D+
Sbjct: 147 KPENILVTSGGTVKLADFGLARI----YSYQMALTPVVVTLWYRAPEVLLQSTYATPVDM 202
Query: 330 FAFGVLLLELI 340
++ G + E+
Sbjct: 203 WSVGCIFAEMF 213
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE--GTFGYLSPEYFMHGIVDEKT- 327
K SN+LL+ + +I DFGLA+ + D H F E T Y +PE ++ K+
Sbjct: 153 KPSNLLLNTTSDLKICDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 211
Query: 328 DVFAFGVLLLELITGR 343
D+++ G +L E+++ R
Sbjct: 212 DIWSVGCILAEMLSNR 227
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVF-PIEGTFGYLSPEYFMHGIVDEKTDV 329
K NIL++ +++DFGLA+ +S+ + P+ T Y +PE + D+
Sbjct: 139 KPENILVTSGGTVKLADFGLARI----YSYQMALAPVVVTLWYRAPEVLLQSTYATPVDM 194
Query: 330 FAFGVLLLELI 340
++ G + E+
Sbjct: 195 WSVGCIFAEMF 205
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVF-PIEGTFGYLSPEYFMHGIVDEKTDV 329
K NIL++ +++DFGLA+ +S+ + P+ T Y +PE + D+
Sbjct: 139 KPENILVTSGGTVKLADFGLARI----YSYQMALDPVVVTLWYRAPEVLLQSTYATPVDM 194
Query: 330 FAFGVLLLELI 340
++ G + E+
Sbjct: 195 WSVGCIFAEMF 205
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 72/191 (37%), Gaps = 40/191 (20%)
Query: 182 EERISDFLSELGIVAHINHPNAAKL--------------IGFSTENGFHLVLQFLPHGSL 227
EE++S LSE+ ++A +NH + ++ + ++ + +L
Sbjct: 43 EEKLSTILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTL 102
Query: 228 SSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISD 287
L+ + +++ I E L Y+ K NI + E +I D
Sbjct: 103 YDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRNL---KPXNIFIDESRNVKIGD 159
Query: 288 FGLAK--------------WLP---DNWSHHIVFPIEGTFGYLSPEYF-MHGIVDEKTDV 329
FGLAK LP DN + I GT Y++ E G +EK D
Sbjct: 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI-----GTAXYVATEVLDGTGHYNEKIDX 214
Query: 330 FAFGVLLLELI 340
++ G++ E I
Sbjct: 215 YSLGIIFFEXI 225
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 12/163 (7%)
Query: 184 RISDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTI 242
R S +E+ ++ I H N L + + ++LV+Q + G L + E
Sbjct: 49 RDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTE--- 105
Query: 243 RYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILL---SEDYEAQISDFGLAKWLPDNWS 299
+L I + L + K N+L E+ + I+DFGL+K +
Sbjct: 106 -KDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-- 162
Query: 300 HHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
I+ GT GY++PE + D ++ GV+ L+ G
Sbjct: 163 --IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIE--GTFGYLSPEYFMHGIVDEKT- 327
K SN+LL+ + +I DFGLA+ + D H F E T Y +PE ++ K+
Sbjct: 151 KPSNLLLNTTXDLKIXDFGLAR-VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSI 209
Query: 328 DVFAFGVLLLELITGR 343
D+++ G +L E+++ R
Sbjct: 210 DIWSVGCILAEMLSNR 225
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 191 KPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIW 247
Query: 331 AFGVLLLELI 340
+ G ++ E++
Sbjct: 248 SVGCIMGEMV 257
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 19/165 (11%)
Query: 186 SDFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLL----FGSTECLEW 240
S +E+ ++ I H N L + + N +LV+Q + G L + F + +
Sbjct: 65 SSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAST 124
Query: 241 TIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNILL-SEDYEAQI--SDFGLAKWLPDN 297
IR + + + YL K N+L S+D E++I SDFGL+K
Sbjct: 125 LIR-----QVLDAVYYLHRMGIVHRDL---KPENLLYYSQDEESKIMISDFGLSKM---E 173
Query: 298 WSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
++ GT GY++PE + D ++ GV+ L+ G
Sbjct: 174 GKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 153 KPSNIVVKSDXTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 331 AFGVLLLELI 340
+ G ++ E++
Sbjct: 210 SVGCIMGEMV 219
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 154 KPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIW 210
Query: 331 AFGVLLLELI 340
+ G ++ E++
Sbjct: 211 SVGCIMGEMV 220
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 331 AFGVLLLELI 340
+ G ++ E++
Sbjct: 210 SVGCIMGEMV 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 154 KPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIW 210
Query: 331 AFGVLLLELI 340
+ G ++ E++
Sbjct: 211 SVGCIMGEMV 220
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 191 KPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIW 247
Query: 331 AFGVLLLELI 340
+ G ++ E++
Sbjct: 248 SVGCIMGEMV 257
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 152 KPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIW 208
Query: 331 AFGVLLLELI 340
+ G ++ E++
Sbjct: 209 SVGCIMGEMV 218
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 153 KPSNIVVKSDXTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 331 AFGVLLLELI 340
+ G ++ E++
Sbjct: 210 SVGCIMGEMV 219
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 331 AFGVLLLELI 340
+ G ++ E++
Sbjct: 210 SVGCIMGEMV 219
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 146 KPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIW 202
Query: 331 AFGVLLLELI 340
+ G ++ E++
Sbjct: 203 SVGCIMGEMV 212
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 147 KPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIW 203
Query: 331 AFGVLLLELI 340
+ G ++ E++
Sbjct: 204 SVGCIMGEMV 213
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 73/198 (36%), Gaps = 13/198 (6%)
Query: 150 IGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNAAKLIGF 209
IG+G VYKG + + F E + + HPN +
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 210 --STENG---FHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXXXX 264
ST G LV + G+L + L + + + I +GLQ+L
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYL-KRFKVXKIKVLRSWCRQILKGLQFLHTRTPPI 152
Query: 265 XXXXXXKASNILLSEDY-EAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIV 323
K NI ++ +I D GLA +++ ++ GT + +PE +
Sbjct: 153 IHRDL-KCDNIFITGPTGSVKIGDLGLATLKRASFAKAVI----GTPEFXAPEXYEEK-Y 206
Query: 324 DEKTDVFAFGVLLLELIT 341
DE DV+AFG LE T
Sbjct: 207 DESVDVYAFGXCXLEXAT 224
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 153 KPSNIVVKSDXTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 331 AFGVLLLELI 340
+ G ++ E++
Sbjct: 210 SVGCIMGEMV 219
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 147 KPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIW 203
Query: 331 AFGVLLLELI 340
+ G ++ E++
Sbjct: 204 SVGCIMGEMV 213
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 158 KPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDLW 214
Query: 331 AFGVLLLELIT------GRRAVD 347
+ G ++ E++ GR +D
Sbjct: 215 SVGCIMGEMVCHKILFPGRDYID 237
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 146 KPSNIVVKSDXTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIW 202
Query: 331 AFGVLLLELI 340
+ G ++ E++
Sbjct: 203 SVGCIMGEMV 212
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 153 KPSNIVVKSDXTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 331 AFGVLLLELI 340
+ G ++ E++
Sbjct: 210 SVGCIMGEMV 219
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMH--GIVDEKTD 328
K SNIL+ ++ ++SDFG ++++ D + GT+ ++ PE+F + K D
Sbjct: 179 KPSNILMDKNGRVKLSDFGESEYMVDKK----IKGSRGTYEFMPPEFFSNESSYNGAKVD 234
Query: 329 VFAFGVLL 336
+++ G+ L
Sbjct: 235 IWSLGICL 242
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 10/129 (7%)
Query: 217 LVLQFLPHGSLSSLLFGS-TECLEWTIRYKIALGIAEGLQYLXXXXXXXXXXXXXKASNI 275
L+L++ G + SL E + ++ I EG+ YL K NI
Sbjct: 106 LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDL---KPQNI 162
Query: 276 LLSEDY---EAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAF 332
LLS Y + +I DFG+++ + + I GT YL+PE + + TD++
Sbjct: 163 LLSSIYPLGDIKIVDFGMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNI 219
Query: 333 GVLLLELIT 341
G++ L+T
Sbjct: 220 GIIAYMLLT 228
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 147 KPSNIVVKSDCTLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDLW 203
Query: 331 AFGVLLLELIT------GRRAVDS 348
+ G ++ E++ GR +D
Sbjct: 204 SVGCIMGEMVCHKILFPGRDYIDQ 227
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 31/164 (18%)
Query: 203 AAKLIGFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXX 262
AA + G + +L+ + +GSL L +T L+ K+A GL +L
Sbjct: 98 AADIKGTGSWTQLYLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 263 XXX-----XXXXXKASNILLSEDYEAQISDFGLA-KWLPDNWSHHIVFPIE---GTFGYL 313
K+ NIL+ ++ I+D GLA K++ D ++ + P GT Y+
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISD--TNEVDIPPNTRVGTKRYM 213
Query: 314 SPEYFMHGIVDEK-----------TDVFAFGVLLLELITGRRAV 346
PE ++DE D+++FG++L E+ RR V
Sbjct: 214 PPE-----VLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCV 250
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 16/204 (7%)
Query: 144 FNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNA 203
+ EN IG+G EV K + G E+ + F E+ I+ ++HPN
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVED-VDRFKQEIEIMKSLDHPNI 68
Query: 204 AKLI-GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXX 262
+L F +LV++ G L + E + +I + + Y
Sbjct: 69 IRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRE-SDAARIMKDVLSAVAYC---HK 124
Query: 263 XXXXXXXXKASNILL---SEDYEAQISDFGL-AKWLPDNWSHHIVFPIEGTFGYLSPEYF 318
K N L S D ++ DFGL A++ P V GT Y+SP+
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV----GTPYYVSPQ-V 179
Query: 319 MHGIVDEKTDVFAFGVLLLELITG 342
+ G+ + D ++ GV++ L+ G
Sbjct: 180 LEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 271 KASNILLSEDY----EAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEK 326
K SNIL ++ +I DFG AK L + ++ T +++PE D
Sbjct: 143 KPSNILYVDESGNPESIRICDFGFAKQL--RAENGLLMTPCYTANFVAPEVLERQGYDAA 200
Query: 327 TDVFAFGVLLLELITG 342
D+++ GVLL ++TG
Sbjct: 201 CDIWSLGVLLYTMLTG 216
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 24/186 (12%)
Query: 189 LSELGIVAHINHPNAAKLIGFSTENGFH-----LVLQFLPHGSLSSLLFGSTECLEWTIR 243
L E+ I+ H H N + + F ++Q L L ++ ST+ L
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI--STQMLSDD-- 112
Query: 244 YKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI- 302
I I + L+ + K SN+L++ + + ++ DFGLA+ + ++ + +
Sbjct: 113 -HIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 303 -------VFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGRRAV----DSRR 350
+ T Y +PE + DV++ G +L EL RR + D R
Sbjct: 172 PTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRH 230
Query: 351 QSLVIW 356
Q L+I+
Sbjct: 231 QLLLIF 236
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 79/204 (38%), Gaps = 16/204 (7%)
Query: 144 FNSENLIGKGGHAEVYKGCLPDGEXXXXXXXXXXXXEDEERISDFLSELGIVAHINHPNA 203
+ EN IG+G EV K + G E+ + F E+ I+ ++HPN
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVED-VDRFKQEIEIMKSLDHPNI 85
Query: 204 AKLI-GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALGIAEGLQYLXXXXX 262
+L F +LV++ G L + + +I + + Y
Sbjct: 86 IRLYETFEDNTDIYLVMELCTGGELFERVV-HKRVFRESDAARIMKDVLSAVAYC---HK 141
Query: 263 XXXXXXXXKASNILL---SEDYEAQISDFGL-AKWLPDNWSHHIVFPIEGTFGYLSPEYF 318
K N L S D ++ DFGL A++ P V GT Y+SP+
Sbjct: 142 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV----GTPYYVSPQ-V 196
Query: 319 MHGIVDEKTDVFAFGVLLLELITG 342
+ G+ + D ++ GV++ L+ G
Sbjct: 197 LEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGI-VDEKTDV 329
K N+LL ++ +I+DFGL+ + D + + G+ Y +PE + + DV
Sbjct: 135 KPENLLLDDNLNVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPEVINGKLYAGPEVDV 191
Query: 330 FAFGVLLLELITGRRAVD 347
++ G++L ++ GR D
Sbjct: 192 WSCGIVLYVMLVGRLPFD 209
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSF---MMEPEVVTRYYRAPEVILGMGYKENVDIW 209
Query: 331 AFGVLLLELIT------GRRAVD 347
+ G ++ E++ GR +D
Sbjct: 210 SVGCIMGEMVCHKILFPGRDYID 232
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 12/157 (7%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I+ + HPN L + L+L+ + G L L E L
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQ 123
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDY----EAQISDFGLAKWLPDNWSHHIVFP 305
I +G+ YL K NI+L + ++ DFGLA + D +F
Sbjct: 124 ILDGVNYLHTKKIAHFDL---KPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF- 179
Query: 306 IEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
GT +++PE + + + D+++ GV+ L++G
Sbjct: 180 --GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 271 KASNILLSEDYEA----QISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEK 326
K SNIL ++ +I DFG AK L + ++ T +++PE DE
Sbjct: 148 KPSNILYVDESGNPECLRICDFGFAKQL--RAENGLLMTPCYTANFVAPEVLKRQGYDEG 205
Query: 327 TDVFAFGVLLLELITG 342
D+++ G+LL ++ G
Sbjct: 206 CDIWSLGILLYTMLAG 221
>pdb|3Q6G|H Chain H, Crystal Structure Of Fab Of Rhesus Mab 2.5b Specific For
Quaternary Neutralizing Epitope Of Hiv-1 Gp120
pdb|3Q6G|I Chain I, Crystal Structure Of Fab Of Rhesus Mab 2.5b Specific For
Quaternary Neutralizing Epitope Of Hiv-1 Gp120
Length = 234
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 372 PRLADAYDLAEMKRAMLTASVCIHHLSTMRPQMTRVLQ---LLRGEGGQTDLKPKPSARR 428
P L + + A+ S+ +H S +R + L+ L+ G GG TD P +R
Sbjct: 9 PGLVKPSETLSLTCAVSGGSISNNHWSWIRQPPGKGLEWIGLISGSGGSTDYNPSLKSRV 68
Query: 429 TVILDGSDEEYS 440
T+ D S ++S
Sbjct: 69 TISTDTSKNQFS 80
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 63/157 (40%), Gaps = 11/157 (7%)
Query: 190 SELGIVAHINHPNAAKLI-GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIAL 248
+E+ I+ ++HP L F + L+L+FL G L + +
Sbjct: 97 NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMR 156
Query: 249 GIAEGLQYLXXXXXXXXXXXXXKASNILL--SEDYEAQISDFGLAKWL-PDNWSHHIVFP 305
EGL+++ K NI+ + +I DFGLA L PD IV
Sbjct: 157 QACEGLKHMHEHSIVHLDI---KPENIMCETKKASSVKIIDFGLATKLNPDE----IVKV 209
Query: 306 IEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
T + +PE V TD++A GVL L++G
Sbjct: 210 TTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 271 KASNILLSEDYEA----QISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEK 326
K SNIL ++ +I DFG AK L + ++ T +++PE DE
Sbjct: 148 KPSNILYVDESGNPECLRICDFGFAKQL--RAENGLLMTPCYTANFVAPEVLKRQGYDEG 205
Query: 327 TDVFAFGVLLLELITG 342
D+++ G+LL ++ G
Sbjct: 206 CDIWSLGILLYTMLAG 221
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 24/186 (12%)
Query: 189 LSELGIVAHINHPNAAKLIGFSTENGFH-----LVLQFLPHGSLSSLLFGSTECLEWTIR 243
L E+ I+ H H N + + F ++Q L L ++ ST+ L
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI--STQMLSDD-- 112
Query: 244 YKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI- 302
I I + L+ + K SN+L++ + + ++ DFGLA+ + ++ + +
Sbjct: 113 -HIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 303 -------VFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGRRAV----DSRR 350
+ T Y +PE + DV++ G +L EL RR + D R
Sbjct: 172 PTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRH 230
Query: 351 QSLVIW 356
Q L+I+
Sbjct: 231 QLLLIF 236
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 31.6 bits (70), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVF 330
K SNI++ D +I DFGLA+ ++ ++ P T Y +PE + E D++
Sbjct: 153 KPSNIVVKSDCTLKILDFGLARTAGTSF---MMEPEVVTRYYRAPEVILGMGYKENVDLW 209
Query: 331 AFGVLLLELIT------GRRAVD 347
+ G ++ E++ GR +D
Sbjct: 210 SVGCIMGEMVCHKILFPGRDYID 232
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 76/186 (40%), Gaps = 24/186 (12%)
Query: 189 LSELGIVAHINHPNAAKLIGFSTENGFH-----LVLQFLPHGSLSSLLFGSTECLEWTIR 243
L E+ I+ H H N + + F ++Q L L ++ ST+ L
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI--STQMLSDD-- 112
Query: 244 YKIALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDYEAQISDFGLAKWLPDNWSHHI- 302
I I + L+ + K SN+L++ + + ++ DFGLA+ + ++ + +
Sbjct: 113 -HIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 303 -------VFPIEGTFGYLSPEYFMHGI-VDEKTDVFAFGVLLLELITGRRAV----DSRR 350
+ T Y +PE + DV++ G +L EL RR + D R
Sbjct: 172 PTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRH 230
Query: 351 QSLVIW 356
Q L+I+
Sbjct: 231 QLLLIF 236
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 12/161 (7%)
Query: 187 DFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYK 245
D E+ I+ I HPN L + + L+L+ + G L L E L +
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATE 118
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDY----EAQISDFGLAKWLPDNWSHH 301
I G+ YL K NI+L + +I DFGLA +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDL---KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+F GT +++PE + + + D+++ GV+ L++G
Sbjct: 176 NIF---GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 12/157 (7%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I+ I HPN L F + L+L+ + G L L E L +
Sbjct: 58 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTEDEATQFLKQ 116
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSE----DYEAQISDFGLAKWLPDNWSHHIVFP 305
I +G+ YL K NI+L + + ++ DFG+A + +F
Sbjct: 117 ILDGVHYLHSKRIAHFDL---KPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF- 172
Query: 306 IEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
GT +++PE + + + D+++ GV+ L++G
Sbjct: 173 --GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 284 QISDFGLAKWLP--DNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+I +FG A+ L DN+ P Y +PE H +V TD+++ G L+ L++
Sbjct: 144 KIIEFGQARQLKPGDNFRLLFTAP-----EYYAPEVHQHDVVSTATDMWSLGTLVYVLLS 198
Query: 342 GRR--AVDSRRQSL--VIWAKPLLQTSNFKELVDPRLADAYD--LAEMKRAMLTASVCIH 395
G ++ +Q + ++ A+ FKE + D D L + +++ +TAS +
Sbjct: 199 GINPFLAETNQQIIENIMNAEYTFDEEAFKE-ISIEAMDFVDRLLVKERKSRMTASEALQ 257
Query: 396 H 396
H
Sbjct: 258 H 258
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 67/169 (39%), Gaps = 24/169 (14%)
Query: 187 DFLSELGIVAHINHPNAAKLI-GFSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYK 245
D E I + HP+ +L+ +S++ ++V +F+ G+ C E R
Sbjct: 72 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMD---------GADLCFEIVKRAD 122
Query: 246 IALGIAEG---------LQYLXXXXXXXXXXXXXKASNILLSEDYEA---QISDFGLAKW 293
+E L+ L K N+LL+ + ++ DFG+A
Sbjct: 123 AGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQ 182
Query: 294 LPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
L + S + GT +++PE + DV+ GV+L L++G
Sbjct: 183 LGE--SGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 12/157 (7%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I+ I HPN L F + L+L+ + G L L E L +
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTEDEATQFLKQ 123
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSE----DYEAQISDFGLAKWLPDNWSHHIVFP 305
I +G+ YL K NI+L + + ++ DFG+A + +F
Sbjct: 124 ILDGVHYLHSKRIAHFDL---KPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF- 179
Query: 306 IEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
GT +++PE + + + D+++ GV+ L++G
Sbjct: 180 --GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 12/157 (7%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I+ I HPN L F + L+L+ + G L L E L +
Sbjct: 79 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTEDEATQFLKQ 137
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSE----DYEAQISDFGLAKWLPDNWSHHIVFP 305
I +G+ YL K NI+L + + ++ DFG+A + +F
Sbjct: 138 ILDGVHYLHSKRIAHFDL---KPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF- 193
Query: 306 IEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
GT +++PE + + + D+++ GV+ L++G
Sbjct: 194 --GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIV 303
K +N LL++D +I DFGLA+ + + HIV
Sbjct: 158 KPANCLLNQDCSVKICDFGLARTINSDKDIHIV 190
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 271 KASNILLSEDY----EAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEK 326
K SNIL ++ +I DFG AK L + ++ T +++PE D
Sbjct: 143 KPSNILYVDESGNPESIRICDFGFAKQL--RAENGLLXTPCYTANFVAPEVLERQGYDAA 200
Query: 327 TDVFAFGVLLLELITG 342
D+++ GVLL +TG
Sbjct: 201 CDIWSLGVLLYTXLTG 216
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGI-VDEKTDV 329
K N+LL E +I+DFGL+ + D + + G+ Y +PE + + DV
Sbjct: 139 KPENLLLDEHLNVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPEVISGKLYAGPEVDV 195
Query: 330 FAFGVLLLELITGRRAVD 347
++ GV+L ++ R D
Sbjct: 196 WSCGVILYVMLCRRLPFD 213
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGI-VDEKTDV 329
K N+LL E +I+DFGL+ + D + + G+ Y +PE + + DV
Sbjct: 130 KPENLLLDEHLNVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPEVISGKLYAGPEVDV 186
Query: 330 FAFGVLLLELITGRRAVD 347
++ GV+L ++ R D
Sbjct: 187 WSCGVILYVMLCRRLPFD 204
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGI-VDEKTDV 329
K N+LL E +I+DFGL+ + D + + G+ Y +PE + + DV
Sbjct: 140 KPENLLLDEHLNVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPEVISGKLYAGPEVDV 196
Query: 330 FAFGVLLLELITGRRAVD 347
++ GV+L ++ R D
Sbjct: 197 WSCGVILYVMLCRRLPFD 214
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 271 KASNILLSEDYEAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGI-VDEKTDV 329
K N+LL E +I+DFGL+ + D + + G+ Y +PE + + DV
Sbjct: 134 KPENLLLDEHLNVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPEVISGKLYAGPEVDV 190
Query: 330 FAFGVLLLELITGRRAVD 347
++ GV+L ++ R D
Sbjct: 191 WSCGVILYVMLCRRLPFD 208
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 14/174 (8%)
Query: 187 DFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYK 245
D E+ I+ I HPN L + + L+L+ + G L L E L +
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATE 118
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDY----EAQISDFGLAKWLPDNWSHH 301
I G+ YL K NI+L + +I DFGLA +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDL---KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAV--DSRRQSL 353
+F GT +++PE + + + D+++ GV+ L++G D+++++L
Sbjct: 176 NIF---GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 14/174 (8%)
Query: 187 DFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYK 245
D E+ I+ I HPN L + + L+L+ + G L L E L +
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATE 118
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDY----EAQISDFGLAKWLPDNWSHH 301
I G+ YL K NI+L + +I DFGLA +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDL---KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAV--DSRRQSL 353
+F GT +++PE + + + D+++ GV+ L++G D+++++L
Sbjct: 176 NIF---GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 12/161 (7%)
Query: 187 DFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYK 245
D E+ I+ I HPN L + + L+L+ + G L L E L +
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATE 118
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDY----EAQISDFGLAKWLPDNWSHH 301
I G+ YL K NI+L + +I DFGLA +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDL---KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
+F GT +++PE + + + D+++ GV+ L++G
Sbjct: 176 NIF---GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 14/174 (8%)
Query: 187 DFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYK 245
D E+ I+ I HPN L + + L+L+ + G L L E L +
Sbjct: 59 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATE 117
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDY----EAQISDFGLAKWLPDNWSHH 301
I G+ YL K NI+L + +I DFGLA +
Sbjct: 118 FLKQILNGVYYLHSLQIAHFDL---KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 174
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAV--DSRRQSL 353
+F GT +++PE + + + D+++ GV+ L++G D+++++L
Sbjct: 175 NIF---GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 225
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 14/174 (8%)
Query: 187 DFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYK 245
D E+ I+ I HPN L + + L+L+ + G L L E L +
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATE 118
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDY----EAQISDFGLAKWLPDNWSHH 301
I G+ YL K NI+L + +I DFGLA +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDL---KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAV--DSRRQSL 353
+F GT +++PE + + + D+++ GV+ L++G D+++++L
Sbjct: 176 NIF---GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 14/174 (8%)
Query: 187 DFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYK 245
D E+ I+ I HPN L + + L+L+ + G L L E L +
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATE 118
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDY----EAQISDFGLAKWLPDNWSHH 301
I G+ YL K NI+L + +I DFGLA +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDL---KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAV--DSRRQSL 353
+F GT +++PE + + + D+++ GV+ L++G D+++++L
Sbjct: 176 NIF---GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 14/174 (8%)
Query: 187 DFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYK 245
D E+ I+ I HPN L + + L+L+ + G L L E L +
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATE 118
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDY----EAQISDFGLAKWLPDNWSHH 301
I G+ YL K NI+L + +I DFGLA +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDL---KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAV--DSRRQSL 353
+F GT +++PE + + + D+++ GV+ L++G D+++++L
Sbjct: 176 NIF---GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 14/174 (8%)
Query: 187 DFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYK 245
D E+ I+ I HPN L + + L+L+ + G L L E L +
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATE 118
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDY----EAQISDFGLAKWLPDNWSHH 301
I G+ YL K NI+L + +I DFGLA +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDL---KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAV--DSRRQSL 353
+F GT +++PE + + + D+++ GV+ L++G D+++++L
Sbjct: 176 NIF---GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 14/174 (8%)
Query: 187 DFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYK 245
D E+ I+ I HPN L + + L+L+ + G L L E L +
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATE 118
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDY----EAQISDFGLAKWLPDNWSHH 301
I G+ YL K NI+L + +I DFGLA +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDL---KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAV--DSRRQSL 353
+F GT +++PE + + + D+++ GV+ L++G D+++++L
Sbjct: 176 NIF---GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 14/174 (8%)
Query: 187 DFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYK 245
D E+ I+ I HPN L + + L+L+ + G L L E L +
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATE 118
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDY----EAQISDFGLAKWLPDNWSHH 301
I G+ YL K NI+L + +I DFGLA +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDL---KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAV--DSRRQSL 353
+F GT +++PE + + + D+++ GV+ L++G D+++++L
Sbjct: 176 NIF---GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 14/174 (8%)
Query: 187 DFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYK 245
D E+ I+ I HPN L + + L+L+ + G L L E L +
Sbjct: 59 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATE 117
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDY----EAQISDFGLAKWLPDNWSHH 301
I G+ YL K NI+L + +I DFGLA +
Sbjct: 118 FLKQILNGVYYLHSLQIAHFDL---KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 174
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAV--DSRRQSL 353
+F GT +++PE + + + D+++ GV+ L++G D+++++L
Sbjct: 175 NIF---GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 225
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 14/174 (8%)
Query: 187 DFLSELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYK 245
D E+ I+ I HPN L + + L+L+ + G L L E L +
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATE 118
Query: 246 IALGIAEGLQYLXXXXXXXXXXXXXKASNILLSEDY----EAQISDFGLAKWLPDNWSHH 301
I G+ YL K NI+L + +I DFGLA +
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDL---KPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 302 IVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAV--DSRRQSL 353
+F GT +++PE + + + D+++ GV+ L++G D+++++L
Sbjct: 176 NIF---GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 226
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 282 EAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ +I+D G A W +++++ I T Y SPE + D+++ L+ ELIT
Sbjct: 176 QIKIADLGNACWYDEHYTNSI-----QTREYRSPEVLLGAPWGCGADIWSTACLIFELIT 230
Query: 342 G 342
G
Sbjct: 231 G 231
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 282 EAQISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELIT 341
+ +I+D G A W +++++ I T Y SPE + D+++ L+ ELIT
Sbjct: 176 QIKIADLGNACWYDEHYTNSI-----QTREYRSPEVLLGAPWGCGADIWSTACLIFELIT 230
Query: 342 G 342
G
Sbjct: 231 G 231
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 13/82 (15%)
Query: 271 KASNILLSE-----DYEAQISDFGLAKWLP---DNWSHHIVFPIEGTFGYLSPEYFMHGI 322
K NIL+S +A ISDFGL K L ++S P GT G+++PE
Sbjct: 145 KPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP--GTEGWIAPEMLSEDC 202
Query: 323 VDEKT---DVFAFGVLLLELIT 341
+ T D+F+ G + +I+
Sbjct: 203 KENPTYTVDIFSAGCVFYYVIS 224
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 284 QISDFGLAKWLPDNWSHHIVFPIEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
++ DFG A + D I T Y +PE ++ D +D+++FG +L EL TG
Sbjct: 202 KLIDFGCATFKSDYHG-----SIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG 255
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 17/116 (14%)
Query: 271 KASNILLSEDYEA---QISDFGLAKWLPDNWSHHIVFPIE-----GTFGYLSPEYFMH-- 320
K NIL + +I DFGL + N + E G+ Y++PE
Sbjct: 138 KPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 321 ---GIVDEKTDVFAFGVLLLELITGRRAVDSRRQSLVIW----AKPLLQTSNFKEL 369
I D++ D+++ GV+L L++G R S W A P Q F+ +
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESI 253
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 28.5 bits (62), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 12/157 (7%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I+ + H N L + L+L+ + G L L E L
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQ 123
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDY----EAQISDFGLAKWLPDNWSHHIVFP 305
I +G+ YL K NI+L + ++ DFGLA + D +F
Sbjct: 124 ILDGVNYLHTKKIAHFDL---KPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF- 179
Query: 306 IEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
GT +++PE + + + D+++ GV+ L++G
Sbjct: 180 --GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 70/170 (41%), Gaps = 14/170 (8%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I+ + H N L + L+L+ + G L L E L
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQ 123
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDY----EAQISDFGLAKWLPDNWSHHIVFP 305
I +G+ YL K NI+L + ++ DFGLA + D +F
Sbjct: 124 ILDGVNYLHTKKIAHFDL---KPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF- 179
Query: 306 IEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITGRRAV--DSRRQSL 353
GT +++PE + + + D+++ GV+ L++G D+++++L
Sbjct: 180 --GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL 227
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 28.1 bits (61), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 12/157 (7%)
Query: 191 ELGIVAHINHPNAAKLIG-FSTENGFHLVLQFLPHGSLSSLLFGSTECLEWTIRYKIALG 249
E+ I+ + H N L + L+L+ + G L L E L
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQ 123
Query: 250 IAEGLQYLXXXXXXXXXXXXXKASNILLSEDY----EAQISDFGLAKWLPDNWSHHIVFP 305
I +G+ YL K NI+L + ++ DFGLA + D +F
Sbjct: 124 ILDGVNYLHTKKIAHFDL---KPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF- 179
Query: 306 IEGTFGYLSPEYFMHGIVDEKTDVFAFGVLLLELITG 342
GT +++PE + + + D+++ GV+ L++G
Sbjct: 180 --GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,114,053
Number of Sequences: 62578
Number of extensions: 511073
Number of successful extensions: 2915
Number of sequences better than 100.0: 912
Number of HSP's better than 100.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 502
Number of HSP's that attempted gapping in prelim test: 1449
Number of HSP's gapped (non-prelim): 928
length of query: 457
length of database: 14,973,337
effective HSP length: 102
effective length of query: 355
effective length of database: 8,590,381
effective search space: 3049585255
effective search space used: 3049585255
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)