Query 012766
Match_columns 457
No_of_seqs 124 out of 828
Neff 2.6
Searched_HMMs 29240
Date Mon Mar 25 15:49:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012766.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012766hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2cop_A Acyl-coenzyme A binding 100.0 1.2E-31 4.2E-36 227.3 11.6 95 311-410 4-98 (109)
2 1hbk_A ACBP, acyl-COA binding 100.0 2E-31 6.7E-36 217.9 11.4 88 315-405 2-89 (89)
3 1st7_A ACBP, acyl-COA-binding 100.0 1.7E-31 5.9E-36 217.1 7.8 85 315-404 1-85 (86)
4 2cqu_A Peroxisomal D3,D2-enoyl 100.0 2.5E-30 8.7E-35 222.0 12.0 95 311-410 12-106 (116)
5 3epy_A Acyl-COA-binding domain 100.0 1.1E-30 3.8E-35 214.5 9.3 86 314-404 3-88 (89)
6 2wh5_A Acyl-COA-binding domain 100.0 2.1E-30 7.2E-35 219.2 8.8 98 312-410 5-102 (106)
7 2cb8_A Acyl-COA-binding protei 100.0 4.6E-30 1.6E-34 209.6 9.1 84 316-404 3-86 (87)
8 3flv_A Acyl-COA-binding domain 100.0 5.1E-30 1.7E-34 221.6 8.9 93 311-404 20-112 (119)
9 3fp5_A Acyl-COA binding protei 100.0 1E-29 3.6E-34 215.2 9.2 87 315-402 4-90 (106)
10 2lbb_A Acyl COA binding protei 100.0 1.6E-29 5.4E-34 211.2 8.4 85 317-405 12-96 (96)
11 1mix_A Talin; focal adhesion, 98.2 7.7E-06 2.6E-10 71.3 9.9 84 315-404 18-115 (206)
12 1ef1_A Moesin; membrane, FERM 95.3 0.06 2E-06 49.5 8.7 84 316-405 97-200 (294)
13 4f7g_A Talin-1; alpha-helix bu 94.9 0.17 6E-06 45.2 10.4 84 314-403 28-125 (222)
14 3qij_A Protein 4.1; cytoskelet 94.7 0.043 1.5E-06 51.6 6.1 80 319-404 114-205 (296)
15 1h4r_A Merlin; FERM, neurofibr 94.2 0.15 5E-06 47.6 8.4 81 318-404 119-219 (314)
16 3ivf_A Talin-1; FERM domain, c 93.6 0.34 1.2E-05 46.4 9.8 83 316-404 184-280 (371)
17 2i1j_A Moesin; FERM, coiled-co 91.6 0.49 1.7E-05 49.2 8.6 83 317-405 101-203 (575)
18 3au4_A Myosin-X; protein-prote 89.6 1.1 3.8E-05 45.3 8.9 85 315-405 321-452 (555)
19 4dxa_B KREV interaction trappe 86.1 1.4 4.6E-05 41.6 6.6 82 316-403 115-221 (322)
20 2al6_A Focal adhesion kinase 1 83.1 1.5 5E-05 42.6 5.5 83 315-403 114-223 (375)
21 3pvl_A Myosin VIIA isoform 1; 73.8 8.9 0.0003 40.5 8.4 83 317-404 372-476 (655)
22 4eku_A Protein-tyrosine kinase 67.0 7.3 0.00025 38.7 5.7 88 313-406 132-246 (392)
23 2j0j_A Focal adhesion kinase 1 24.3 69 0.0023 32.9 4.6 61 338-398 133-219 (656)
No 1
>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.97 E-value=1.2e-31 Score=227.31 Aligned_cols=95 Identities=26% Similarity=0.507 Sum_probs=89.1
Q ss_pred ccchHHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHHhhhhhccCCCCCCCCCccChhhHHHHHHHHHcCCCChHHHHH
Q 012766 311 ERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAME 390 (457)
Q Consensus 311 EssELEErFeaAVefVksLPk~G~vsqLS~DdKLeLYGLYKQATeGDCn~pKPG~fD~VGRAKWnAWKaLKGMSKEEAMk 390 (457)
++++|+++|.+|+.+|+.++ .+|+++++|+|||||||||+|||++++|++||+++|+||+||++|+|||+++||+
T Consensus 4 ~~~~l~~~F~~A~~~vk~l~-----~~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~eeAm~ 78 (109)
T 2cop_A 4 GSSGLAELFEKAAAHLQGLI-----QVASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDSSPSQAMQ 78 (109)
T ss_dssp CCCCSHHHHHHHHHHHTTST-----TTSCHHHHHHHHHHHHHHHTCSCCSCCCCSSCHHHHHHHHHHHSCTTCCHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHcc-----cCCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHHHHHHHHHHHhcCCCHHHHHH
Confidence 45678999999999999986 3689999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCcccccCCCCC
Q 012766 391 QYVTILSRSIPGCIQDGIGG 410 (457)
Q Consensus 391 KYIELVeeLiP~W~e~s~~~ 410 (457)
+||++|++++|.|....+..
T Consensus 79 ~YI~lv~~l~~~~~~~~~~~ 98 (109)
T 2cop_A 79 EYIAVVKKLDPGWNPQIPEK 98 (109)
T ss_dssp HHHHHHHHHCTTCCCCCCCC
T ss_pred HHHHHHHHHhhhhcccchhc
Confidence 99999999999999887653
No 2
>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1
Probab=99.97 E-value=2e-31 Score=217.91 Aligned_cols=88 Identities=28% Similarity=0.520 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHHhhhhhccCCCCCCCCCccChhhHHHHHHHHHcCCCChHHHHHHHHH
Q 012766 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVT 394 (457)
Q Consensus 315 LEErFeaAVefVksLPk~G~vsqLS~DdKLeLYGLYKQATeGDCn~pKPG~fD~VGRAKWnAWKaLKGMSKEEAMkKYIE 394 (457)
|+++|.+|+.+|+.+++. .+|+++++|+|||||||||+|||++++||+||+++|+||+||++++|||+++||++||+
T Consensus 2 l~~~F~~A~~~v~~l~~~---~~~~~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~YI~ 78 (89)
T 1hbk_A 2 MAQVFEECVSFINGLPRT---INLPNELKLDLYKYYKQSTIGNCNIKEPSAHKYIDRKKYEAWKSVENLNREDAQKRYVD 78 (89)
T ss_dssp HHHHHHHHHHHHHHSCTT---CCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTSHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCc---CCCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHhHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 688999999999999742 46899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCccccc
Q 012766 395 ILSRSIPGCIQ 405 (457)
Q Consensus 395 LVeeLiP~W~e 405 (457)
+|++++|.|.+
T Consensus 79 ~v~~l~~~~~~ 89 (89)
T 1hbk_A 79 IVSEIFPYWQD 89 (89)
T ss_dssp HHHHHCTTTTC
T ss_pred HHHHHcccccC
Confidence 99999999963
No 3
>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.7e-31 Score=217.08 Aligned_cols=85 Identities=26% Similarity=0.447 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHHhhhhhccCCCCCCCCCccChhhHHHHHHHHHcCCCChHHHHHHHHH
Q 012766 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVT 394 (457)
Q Consensus 315 LEErFeaAVefVksLPk~G~vsqLS~DdKLeLYGLYKQATeGDCn~pKPG~fD~VGRAKWnAWKaLKGMSKEEAMkKYIE 394 (457)
|+++|.+|+.+|+.++ .+|+++++|+|||||||||+|||++++||+||+++|+||+||++++|||+++||++||+
T Consensus 1 l~~~F~~A~~~v~~l~-----~~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~eeA~~~YI~ 75 (86)
T 1st7_A 1 VSQLFEEKAKAVNELP-----TKPSTDELLELYALYKQATVGDNDKEKPGIFNMKDRYKWEAWENLKGKSQEDAEKEYIA 75 (86)
T ss_dssp CHHHHHHHHHHHTSCS-----SCCCHHHHHHHHHHHHHHHHCSCCCCCCCSSCHHHHHHHHHHHTTTTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcc-----CCcCHHHHHHHHHHHHHHhhCCCCCCCCCccCHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 4689999999999997 36899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCcccc
Q 012766 395 ILSRSIPGCI 404 (457)
Q Consensus 395 LVeeLiP~W~ 404 (457)
+|++++|.|.
T Consensus 76 ~v~~l~~~~~ 85 (86)
T 1st7_A 76 LVDQLIAKYS 85 (86)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHhhhhc
Confidence 9999999995
No 4
>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.97 E-value=2.5e-30 Score=222.05 Aligned_cols=95 Identities=29% Similarity=0.514 Sum_probs=88.6
Q ss_pred ccchHHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHHhhhhhccCCCCCCCCCccChhhHHHHHHHHHcCCCChHHHHH
Q 012766 311 ERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAME 390 (457)
Q Consensus 311 EssELEErFeaAVefVksLPk~G~vsqLS~DdKLeLYGLYKQATeGDCn~pKPG~fD~VGRAKWnAWKaLKGMSKEEAMk 390 (457)
.+.+|+++|++|+++|+.++. .|+++++|+|||||||||+|||+.++|++||+++|+||+||++|+|||+++||+
T Consensus 12 ~m~~~~~~F~~A~~~vk~l~~-----~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graKw~AW~~l~gms~eeAm~ 86 (116)
T 2cqu_A 12 AMRASQKDFENSMNQVKLLKK-----DPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGSLPKEAARQ 86 (116)
T ss_dssp SCCCCHHHHHHHHHHHHHCCS-----CCCHHHHHHHHHHHTTTTTCSCCSCCCCTTCHHHHHHHHHHHHHCSCCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHccC-----CCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHHhcCCCHHHHHH
Confidence 355679999999999999973 589999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCcccccCCCCC
Q 012766 391 QYVTILSRSIPGCIQDGIGG 410 (457)
Q Consensus 391 KYIELVeeLiP~W~e~s~~~ 410 (457)
+||++|++++|.|.......
T Consensus 87 ~YI~lv~~l~~~~~~~~~~~ 106 (116)
T 2cqu_A 87 NYVDLVSSLSPSLESSSQVE 106 (116)
T ss_dssp HHHHHHHHHCSCCCCCCCCC
T ss_pred HHHHHHHHHccccccccccc
Confidence 99999999999998886654
No 5
>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1
Probab=99.97 E-value=1.1e-30 Score=214.48 Aligned_cols=86 Identities=26% Similarity=0.317 Sum_probs=82.1
Q ss_pred hHHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHHhhhhhccCCCCCCCCCccChhhHHHHHHHHHcCCCChHHHHHHHH
Q 012766 314 ELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYV 393 (457)
Q Consensus 314 ELEErFeaAVefVksLPk~G~vsqLS~DdKLeLYGLYKQATeGDCn~pKPG~fD~VGRAKWnAWKaLKGMSKEEAMkKYI 393 (457)
.|+++|.+|+.+|+.++ .+|+++++|+|||||||||+|||+.++||+||+++|+||+||++++|||+++||++||
T Consensus 3 ~L~~~F~~A~~~vk~l~-----~~p~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~g~s~eeA~~~Yi 77 (89)
T 3epy_A 3 ALQADFDRAAEDVRKLK-----ARPDDGELKELYGLYKQAIVGDINIACPGMLDLKGKAKWEAWNLKKGLSTEDATSAYI 77 (89)
T ss_dssp HHHHHHHHHHHHGGGCS-----SCCCHHHHHHHHHHHHHHHTCSCCSCCTTTTCHHHHHHHHHHHTTTTCCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcC-----CCcCHHHHHHHHHHHHHHhhCCCCCCCCcccchHHHHHHHHHHHhhCCCHHHHHHHHH
Confidence 48999999999999997 3689999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCcccc
Q 012766 394 TILSRSIPGCI 404 (457)
Q Consensus 394 ELVeeLiP~W~ 404 (457)
++|++++|.|.
T Consensus 78 ~~v~~l~~ky~ 88 (89)
T 3epy_A 78 SKAKELIEKYG 88 (89)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHhhhhc
Confidence 99999999873
No 6
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=99.96 E-value=2.1e-30 Score=219.24 Aligned_cols=98 Identities=30% Similarity=0.479 Sum_probs=85.9
Q ss_pred cchHHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHHhhhhhccCCCCCCCCCccChhhHHHHHHHHHcCCCChHHHHHH
Q 012766 312 RTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQ 391 (457)
Q Consensus 312 ssELEErFeaAVefVksLPk~G~vsqLS~DdKLeLYGLYKQATeGDCn~pKPG~fD~VGRAKWnAWKaLKGMSKEEAMkK 391 (457)
.++|+++|++|+.+|+.+++.|+ .+|+++++|+|||||||||+|||+.++||+||+++|+||+||++++|||+++||++
T Consensus 5 ~~~l~~~F~~A~~~vk~l~~~g~-~~ps~e~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~ 83 (106)
T 2wh5_A 5 EPDCQKQFQAAVSVIQNLPKNGS-YRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMSA 83 (106)
T ss_dssp ----CHHHHHHHHHHHHSCSSCS-CCCCHHHHHHHHHHHHHHHHCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhccccCC-CCCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 34688999999999999987665 37899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCcccccCCCCC
Q 012766 392 YVTILSRSIPGCIQDGIGG 410 (457)
Q Consensus 392 YIELVeeLiP~W~e~s~~~ 410 (457)
||+++++++|.+.+.-|..
T Consensus 84 YI~~v~~l~~k~~~t~~~~ 102 (106)
T 2wh5_A 84 YITEMKLVAQKVIDTVPLG 102 (106)
T ss_dssp HHHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHHHhhccCCch
Confidence 9999999999998775553
No 7
>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A
Probab=99.96 E-value=4.6e-30 Score=209.61 Aligned_cols=84 Identities=25% Similarity=0.370 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCChHHHHHHHHhhhhhccCCCCCCCCCccChhhHHHHHHHHHcCCCChHHHHHHHHHH
Q 012766 316 ERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTI 395 (457)
Q Consensus 316 EErFeaAVefVksLPk~G~vsqLS~DdKLeLYGLYKQATeGDCn~pKPG~fD~VGRAKWnAWKaLKGMSKEEAMkKYIEL 395 (457)
+++|++|+.+|+.++ .+|+++++|+|||||||||+|||+.++||+||+++|+||+||++++|||+++||++||++
T Consensus 3 ~~~F~~A~~~vk~l~-----~~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~Yi~~ 77 (87)
T 2cb8_A 3 QAEFEKAAEEVRHLK-----TKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINK 77 (87)
T ss_dssp HHHHHHHHHHGGGCS-----SCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcc-----CCcCHHHHHHHHHHHHhhhhCCCCCCCCCcccHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 679999999999997 368999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCcccc
Q 012766 396 LSRSIPGCI 404 (457)
Q Consensus 396 VeeLiP~W~ 404 (457)
|++++|.|.
T Consensus 78 v~~l~~~~~ 86 (87)
T 2cb8_A 78 VEELKKKYG 86 (87)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999999884
No 8
>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens}
Probab=99.96 E-value=5.1e-30 Score=221.61 Aligned_cols=93 Identities=30% Similarity=0.476 Sum_probs=86.2
Q ss_pred ccchHHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHHhhhhhccCCCCCCCCCccChhhHHHHHHHHHcCCCChHHHHH
Q 012766 311 ERTELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAME 390 (457)
Q Consensus 311 EssELEErFeaAVefVksLPk~G~vsqLS~DdKLeLYGLYKQATeGDCn~pKPG~fD~VGRAKWnAWKaLKGMSKEEAMk 390 (457)
.+++|+++|.+|+.+|+.+|+.|++ +|+++++|+|||||||||+|||+.++|++||+++|+||+||++++|||+++||+
T Consensus 20 ~~~dLe~~F~~A~~~Vk~l~~~g~~-~ps~d~~L~LYaLyKQAT~Gd~~~~~Pg~~d~~graKw~AW~~l~gmS~eeAm~ 98 (119)
T 3flv_A 20 FQSMHETRFEAAVKVIQSLPKNGSF-QPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSSLGDMTKEEAMI 98 (119)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHSSC-CCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHhCcccCCC-CCCHHHHHHHHHHHHHHhcCCCCCCCCCccCHHHHHHHHHHHHccCCCHHHHHH
Confidence 5679999999999999999876653 789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCcccc
Q 012766 391 QYVTILSRSIPGCI 404 (457)
Q Consensus 391 KYIELVeeLiP~W~ 404 (457)
+||++|+++++...
T Consensus 99 ~YI~~v~~l~~~~~ 112 (119)
T 3flv_A 99 AYVEEMKKIIETMP 112 (119)
T ss_dssp HHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHhhCC
Confidence 99999999988763
No 9
>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} SCOP: a.11.1.0
Probab=99.96 E-value=1e-29 Score=215.19 Aligned_cols=87 Identities=26% Similarity=0.434 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHHhhhhhccCCCCCCCCCccChhhHHHHHHHHHcCCCChHHHHHHHHH
Q 012766 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVT 394 (457)
Q Consensus 315 LEErFeaAVefVksLPk~G~vsqLS~DdKLeLYGLYKQATeGDCn~pKPG~fD~VGRAKWnAWKaLKGMSKEEAMkKYIE 394 (457)
++++|.+|+.+|+.++++|+ .+|+++++|+|||||||||+|||+.++||+||+++|+||+||++++|||+++||++||+
T Consensus 4 ~~~~F~~A~~~vk~l~~~g~-~~ps~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gmS~eeA~~~YI~ 82 (106)
T 3fp5_A 4 SKAKFDKAVEIVQSLPKDGP-IKPTQDEQLYFYKYFKQATVGDVNISRPGLMDFTGKAKWDAWKSVEGTSKEVAYQKYVE 82 (106)
T ss_dssp CHHHHHHHHHHHHHCCSSSS-SCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcccccC-CCCCHHHHHHHHHHHHHHhcCCCCCCCCCccchHHHHHHHHHHHccCCCHHHHHHHHHH
Confidence 57899999999999997765 37999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCcc
Q 012766 395 ILSRSIPG 402 (457)
Q Consensus 395 LVeeLiP~ 402 (457)
+|.+++|.
T Consensus 83 ~v~~l~~~ 90 (106)
T 3fp5_A 83 KLLEILKK 90 (106)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcc
Confidence 99999987
No 10
>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis}
Probab=99.96 E-value=1.6e-29 Score=211.16 Aligned_cols=85 Identities=35% Similarity=0.594 Sum_probs=80.4
Q ss_pred HHHHHHHHHHhhccCCCCCCCCChHHHHHHHHhhhhhccCCCCCCCCCccChhhHHHHHHHHHcCCCChHHHHHHHHHHH
Q 012766 317 RLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQPMALKVSARANWNAWKQLGNMTPEIAMEQYVTIL 396 (457)
Q Consensus 317 ErFeaAVefVksLPk~G~vsqLS~DdKLeLYGLYKQATeGDCn~pKPG~fD~VGRAKWnAWKaLKGMSKEEAMkKYIELV 396 (457)
.+|++|+..|+++++ .+|+++++|+|||||||||+|||++++||+||++||+||+||++++|||+++||++||++|
T Consensus 12 ~~F~~A~~~vk~l~~----~~ps~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graKw~AW~~l~gmS~eeAm~~YI~lv 87 (96)
T 2lbb_A 12 DDFDAAVKYVSNTTT----MMASNDDKLCFYKYYKQATVGDCNKPKPGMLQLQEKYKWEAWNALRGMSTESAKEAYVKLL 87 (96)
T ss_dssp STHHHHHHHHHHCCC----SCCCTTTTTHHHHHHHHTTTSSCCCCCCCSSCSHHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC----CCCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHhHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 379999999999973 2589999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCccccc
Q 012766 397 SRSIPGCIQ 405 (457)
Q Consensus 397 eeLiP~W~e 405 (457)
++++|.|.+
T Consensus 88 ~~l~~~~~~ 96 (96)
T 2lbb_A 88 DTLAPSWRN 96 (96)
T ss_dssp HHHCGGGTC
T ss_pred HHHhchhcC
Confidence 999999963
No 11
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=98.18 E-value=7.7e-06 Score=71.33 Aligned_cols=84 Identities=25% Similarity=0.263 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHHhhhhhccCCCCCC--CCCccChh------------hHHHHHHHHHc
Q 012766 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP--QPMALKVS------------ARANWNAWKQL 380 (457)
Q Consensus 315 LEErFeaAVefVksLPk~G~vsqLS~DdKLeLYGLYKQATeGDCn~p--KPG~fD~V------------GRAKWnAWKaL 380 (457)
+.--|.++..-|-. |++ ..+.++.+.|.||..||..||++.. .|+.+++. .+.-+++|+++
T Consensus 18 ~~l~y~Q~~~dil~----g~~-~~~~~~a~~Laal~~qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~i~~~~~~~ 92 (206)
T 1mix_A 18 LNLLYVQARDDILN----GSH-PVSFDKACEFAGYQCQIQFGPHNEQKHKPGFLELKDFLPKEYIKQKGERKIFMAHKNC 92 (206)
T ss_dssp HHHHHHHHHHHHHT----TSS-CCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGSTTCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHC----Ccc-ccCHHHHHHHHHHhhhheecCCCcccccCCccchHhhCCHHHhhcccHHHHHHHHHHc
Confidence 34456666665543 333 5789999999999999999999874 46554443 67789999999
Q ss_pred CCCChHHHHHHHHHHHHhhCcccc
Q 012766 381 GNMTPEIAMEQYVTILSRSIPGCI 404 (457)
Q Consensus 381 KGMSKEEAMkKYIELVeeLiP~W~ 404 (457)
+|||+++|+.+|++++.++ |.|-
T Consensus 93 ~g~s~~~A~~~yL~~~~~l-~~yG 115 (206)
T 1mix_A 93 GNMSEIEAKVRYVKLARSL-KTYG 115 (206)
T ss_dssp TTCCHHHHHHHHHHHHHHS-TTTT
T ss_pred cCCCHHHHHHHHHHHHHhC-cccC
Confidence 9999999999999999765 5554
No 12
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=95.31 E-value=0.06 Score=49.51 Aligned_cols=84 Identities=14% Similarity=0.108 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCChHHHHHHHHhhhhhccCCCCCC--CCCccC---h--h---h-----HHHH-----H
Q 012766 316 ERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP--QPMALK---V--S---A-----RANW-----N 375 (457)
Q Consensus 316 EErFeaAVefVksLPk~G~vsqLS~DdKLeLYGLYKQATeGDCn~p--KPG~fD---~--V---G-----RAKW-----n 375 (457)
.--|.++..-|-. |.+ ..+.++.+.|=||--||..||++.. .|+.++ + . . ...| .
T Consensus 97 ~l~y~Q~~~dil~----g~~-~~~~e~a~~Laal~~q~~~Gd~~~~~~~~~~l~~~~~lP~~~~~~~~~~~~~~~~~I~~ 171 (294)
T 1ef1_A 97 RLFFLQVKEGILN----DDI-YCPPETAVLLASYAVQSKYGDFNKEVHKSGYLAGDKLLPQRVLEQHKLNKDQWEERIQV 171 (294)
T ss_dssp HHHHHHHHHHHHT----TSS-CCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHHHBCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc----Ccc-cCCHHHHHHHHHHHHHHHhCCCCccccChhhccccccCCHHHHhhcCCCHHHHHHHHHH
Confidence 3445555555432 343 5788999999999999999999864 244321 1 0 0 2234 6
Q ss_pred HHHHcCCCChHHHHHHHHHHHHhhCccccc
Q 012766 376 AWKQLGNMTPEIAMEQYVTILSRSIPGCIQ 405 (457)
Q Consensus 376 AWKaLKGMSKEEAMkKYIELVeeLiP~W~e 405 (457)
+|++++|||+.+|+.+|++++.+ +|.|-.
T Consensus 172 ~~~~~~g~s~~~A~~~yL~~~~~-lp~yG~ 200 (294)
T 1ef1_A 172 WHEEHRGMLREDAVLEYLKIAQD-LEMYGV 200 (294)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHTT-STTTTC
T ss_pred HHHHccCCCHHHHHHHHHHHHcc-cCccCc
Confidence 89999999999999999999975 566643
No 13
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}
Probab=94.94 E-value=0.17 Score=45.15 Aligned_cols=84 Identities=23% Similarity=0.263 Sum_probs=58.5
Q ss_pred hHHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHHhhhhhccCCCCCC--CCCccCh-----------h-hHHHHHHHHH
Q 012766 314 ELERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP--QPMALKV-----------S-ARANWNAWKQ 379 (457)
Q Consensus 314 ELEErFeaAVefVksLPk~G~vsqLS~DdKLeLYGLYKQATeGDCn~p--KPG~fD~-----------V-GRAKWnAWKa 379 (457)
.+.--|.++..-|-. |.+ ..+.++-+.|=||--||..||.+.. .|+.+.+ . .+.=..+|++
T Consensus 28 ~l~l~ylQ~~~dil~----G~~-~~~~e~a~~LAal~~Qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~~~~~I~~~h~~ 102 (222)
T 4f7g_A 28 QLNLLYVQARDDILN----GSH-PVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKN 102 (222)
T ss_dssp HHHHHHHHHHHHHHT----TSS-CCCHHHHHHHHHHHHHHHHCSCCTTTSCSSCSCGGGTSCGGGGGGCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhC----Ccc-cCCHHHHHHHHHHHHHHHHCCCCchhcccCccchhhccCHHHHhhhhHHHHHHHHHh
Confidence 344455555554432 332 5788999999999999999998763 2332211 1 1122468999
Q ss_pred cCCCChHHHHHHHHHHHHhhCccc
Q 012766 380 LGNMTPEIAMEQYVTILSRSIPGC 403 (457)
Q Consensus 380 LKGMSKEEAMkKYIELVeeLiP~W 403 (457)
++|||+.+|+.+|++++.++ |.|
T Consensus 103 ~~g~s~~eA~~~yL~~~~~l-~~y 125 (222)
T 4f7g_A 103 CGQMSEIEAKVRYVKLARSL-KTY 125 (222)
T ss_dssp TTTCCHHHHHHHHHHHHHTS-TTT
T ss_pred ccCCCHHHHHHHHHHHHhhc-ccc
Confidence 99999999999999999865 554
No 14
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A
Probab=94.72 E-value=0.043 Score=51.55 Aligned_cols=80 Identities=11% Similarity=0.006 Sum_probs=55.8
Q ss_pred HHHHHHHHhhccCCCCCCCCChHHHHHHHHhhhhhccCCCCCC--CCCccC-----hhhHHH-----HHHHHHcCCCChH
Q 012766 319 FGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP--QPMALK-----VSARAN-----WNAWKQLGNMTPE 386 (457)
Q Consensus 319 FeaAVefVksLPk~G~vsqLS~DdKLeLYGLYKQATeGDCn~p--KPG~fD-----~VGRAK-----WnAWKaLKGMSKE 386 (457)
|.++..-|-. |.+ ..+.++-+.|=||--||..||++.. .|+.+. +..... ..+|++++|||+.
T Consensus 114 ylQ~~~dil~----G~~-~c~~e~a~~LAAl~~Qae~Gd~~~~~~~~~yl~~~~~~P~~~~~~~~~I~~~h~~~~g~s~~ 188 (296)
T 3qij_A 114 CLQLRQDIVA----GRL-PCSFATLALLGSYTIQSELGDYDPELHGVDYVSDFKLAPNQTKELEEKVMELHKSYRSMTPA 188 (296)
T ss_dssp HHHHHHHHHH----TSS-CCCHHHHHHHHHHHHHHHHCSCCHHHHTTCCCTTSCCSSSCCHHHHHHHHHHHHTCCSCCHH
T ss_pred HHHHHHHHHc----CCC-CCCHHHHHHHHHHHHHHhcCCCCccccchhhCcHhhcCCcCHHHHHHHHHHHHHHccCCCHH
Confidence 4555554432 333 5688999999999999999998742 222221 111222 3679999999999
Q ss_pred HHHHHHHHHHHhhCcccc
Q 012766 387 IAMEQYVTILSRSIPGCI 404 (457)
Q Consensus 387 EAMkKYIELVeeLiP~W~ 404 (457)
+|+.+|++++.+ +|.|-
T Consensus 189 eA~~~yL~~a~~-l~~yG 205 (296)
T 3qij_A 189 QADLEFLENAKK-LSMYG 205 (296)
T ss_dssp HHHHHHHHHHTT-STTTT
T ss_pred HHHHHHHHHHhc-ccccC
Confidence 999999999987 56654
No 15
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=94.20 E-value=0.15 Score=47.59 Aligned_cols=81 Identities=12% Similarity=0.069 Sum_probs=57.0
Q ss_pred HHHHHHHHHhhccCCCCCCCCChHHHHHHHHhhhhhccCCCCCC--CCCccCh--------hh-----HHHH-----HHH
Q 012766 318 LFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP--QPMALKV--------SA-----RANW-----NAW 377 (457)
Q Consensus 318 rFeaAVefVksLPk~G~vsqLS~DdKLeLYGLYKQATeGDCn~p--KPG~fD~--------VG-----RAKW-----nAW 377 (457)
-|.++..-|- .|.+ ..+.++-+.|=||--||..||++.. .|+.++. .. ...| .+|
T Consensus 119 ~y~Q~~~dil----~g~~-~~~~e~a~~Laal~~Qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~~~~~~~I~~~~ 193 (314)
T 1h4r_A 119 FFLQVKKQIL----DEKI-YCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMTPEMWEERITAWY 193 (314)
T ss_dssp HHHHHHHHHH----TTSS-CCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHTTSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHh----CCCc-cCCHHHHHHHHHHHHHHHHCCCCccccchhhcchhhcCCHHHHhhccCCHHHHHHHHHHHH
Confidence 4455555443 2343 5788999999999999999999764 3433211 00 1233 689
Q ss_pred HHcCCCChHHHHHHHHHHHHhhCcccc
Q 012766 378 KQLGNMTPEIAMEQYVTILSRSIPGCI 404 (457)
Q Consensus 378 KaLKGMSKEEAMkKYIELVeeLiP~W~ 404 (457)
+++.|||+.+|+.+|++++.+ +|.|-
T Consensus 194 ~~~~g~s~~eA~~~yL~~~~~-lp~yG 219 (314)
T 1h4r_A 194 AEHRGRARDEAEMEYLKIAQD-LEMYG 219 (314)
T ss_dssp HTTTTCCHHHHHHHHHHHHTT-STTTT
T ss_pred HHcCCCCHHHHHHHHHHHHhc-cCccC
Confidence 999999999999999999976 46553
No 16
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=93.57 E-value=0.34 Score=46.38 Aligned_cols=83 Identities=22% Similarity=0.225 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCChHHHHHHHHhhhhhccCCCCCCC--CCccCh-----------h-hHHHHHHHHHcC
Q 012766 316 ERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQ--PMALKV-----------S-ARANWNAWKQLG 381 (457)
Q Consensus 316 EErFeaAVefVksLPk~G~vsqLS~DdKLeLYGLYKQATeGDCn~pK--PG~fD~-----------V-GRAKWnAWKaLK 381 (457)
.--|.++..-+-. |.+ ..+.++-+.|=||.-||..||++... |+.+.+ . .+.=-.+|++++
T Consensus 184 ~l~y~Q~~~dil~----G~~-~c~~e~a~~LAAl~~qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~~e~~I~~~~~~~~ 258 (371)
T 3ivf_A 184 NLLYVQARDDILN----GSH-PVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCG 258 (371)
T ss_dssp HHHHHHHHHHHHT----SSS-CCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGTTSCHHHHHHHHHHHTT
T ss_pred HHHHHHhhHHHhC----cee-ecCHHHHHHHHHHHHHHHhCCCChhhcccchhcccccCCHHHhCchHHHHHHHHHHHcc
Confidence 3345555554432 333 57889999999999999999998642 322110 1 122246899999
Q ss_pred CCChHHHHHHHHHHHHhhCcccc
Q 012766 382 NMTPEIAMEQYVTILSRSIPGCI 404 (457)
Q Consensus 382 GMSKEEAMkKYIELVeeLiP~W~ 404 (457)
|||+.+|+.+|++++.++ |.|-
T Consensus 259 g~s~~eA~~~yL~~~~~l-~~yG 280 (371)
T 3ivf_A 259 QMSEIEAKVRYVKLARSL-KTYG 280 (371)
T ss_dssp TCCHHHHHHHHHHHHHHS-TTTT
T ss_pred CCCHHHHHHHHHHHHhcc-cccC
Confidence 999999999999999764 5553
No 17
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=91.60 E-value=0.49 Score=49.18 Aligned_cols=83 Identities=19% Similarity=0.222 Sum_probs=58.6
Q ss_pred HHHHHHHHHHhhccCCCCCCCCChHHHHHHHHhhhhhccCCCCCC--CCCccC---hh----------hHHHH-----HH
Q 012766 317 RLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP--QPMALK---VS----------ARANW-----NA 376 (457)
Q Consensus 317 ErFeaAVefVksLPk~G~vsqLS~DdKLeLYGLYKQATeGDCn~p--KPG~fD---~V----------GRAKW-----nA 376 (457)
--|..+..-|- .|.+ +.+.++-+.|=||--||..||++.. .|+.++ +. ....| ..
T Consensus 101 LlYlQvk~dIl----~G~l-~c~~e~a~~LAAL~lQae~GDy~~~~~~~~yl~~~~~lP~~vl~~~~~s~e~~~~~I~~~ 175 (575)
T 2i1j_A 101 LFYLQVKNAIL----SDEI-YCPPETSVLLASYAVQARHGDHNPAVHGPGFLANDRLLPQRVTDQHKMSREEWEQSITNW 175 (575)
T ss_dssp HHHHHHHHHHH----TTSS-CCCHHHHHHHHHHHHHHHHCSCCTTTCCTTTTTTCCCSCHHHHHTBCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHh----CCCC-CCCHHHHHHHHHHHHHHHhcCCChhhcccccccccccCCHHHHhhcCCCHHHHHHHHHHH
Confidence 34555555443 2443 5788999999999999999999864 344331 11 12344 67
Q ss_pred HHHcCCCChHHHHHHHHHHHHhhCccccc
Q 012766 377 WKQLGNMTPEIAMEQYVTILSRSIPGCIQ 405 (457)
Q Consensus 377 WKaLKGMSKEEAMkKYIELVeeLiP~W~e 405 (457)
|+++.|||+.+|+..|+.++.+ +|.|-.
T Consensus 176 hk~l~G~s~~eA~~~yL~~a~~-lp~YG~ 203 (575)
T 2i1j_A 176 WQEHRGMLREDAMMEYLKIAQD-LEMYGV 203 (575)
T ss_dssp HGGGTTCCHHHHHHHHHHHHTT-STTTTC
T ss_pred HHHccCCCHHHHHHHHHHHHHh-ccccCC
Confidence 9999999999999999999985 466643
No 18
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A
Probab=89.64 E-value=1.1 Score=45.28 Aligned_cols=85 Identities=21% Similarity=0.309 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCChHHHHHHHHhhhhhccCCCCCCC--CCccC------hhh----------------
Q 012766 315 LERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQ--PMALK------VSA---------------- 370 (457)
Q Consensus 315 LEErFeaAVefVksLPk~G~vsqLS~DdKLeLYGLYKQATeGDCn~pK--PG~fD------~VG---------------- 370 (457)
+.--|.++..-|-. |.+ ..+.++-+.|-||.-|+..||++... +..-+ +..
T Consensus 321 ~~lly~Q~~~dil~----G~~-~~~~e~a~~LAAl~lQ~~~GD~~~~~~~~~l~~~lP~~~l~~~~~~~~k~~s~~~~~l 395 (555)
T 3au4_A 321 FAFMFEQAHEAVIH----GHH-PAPEENLQVLAALRLQYLQGDYTLHAAIPPLEEVYSLQRLKARISQSTKTFSFRTGSV 395 (555)
T ss_dssp HHHHHHHHHHHHHT----TCS-CCCHHHHHHHHHHHHHHHHCSCCTTCCCCCGGGTSCCHHHHHHHHHTTCCEECCTTSC
T ss_pred HHhhHHHHHHHHHC----CCC-CCCHHHHHHHHHHHHHHHcCCCccccchhhhhhhCCHHHhhhhhcccccccccccccc
Confidence 44566667665543 332 56789999999999999999987632 11100 000
Q ss_pred ----------HHHH-------------HHHHHcCCCChHHHHHHHHHHHHhhCccccc
Q 012766 371 ----------RANW-------------NAWKQLGNMTPEIAMEQYVTILSRSIPGCIQ 405 (457)
Q Consensus 371 ----------RAKW-------------nAWKaLKGMSKEEAMkKYIELVeeLiP~W~e 405 (457)
...| ..|++++|||+.+|+.+|++++.++ |.|-.
T Consensus 396 ~~~~~~~~~~~~~W~~~~~~~~~~~I~~~~~~~~g~s~~eA~~~yL~~~~~l-p~yG~ 452 (555)
T 3au4_A 396 VRQKVEEEQMLDMWIKEEVSSARASIIDKWRKFQGMNQEQAMAKYMALIKEW-PGYGS 452 (555)
T ss_dssp CEECCCCHHHHHHHTHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTS-TTTTC
T ss_pred ccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhC-CCcCc
Confidence 1123 5788999999999999999999766 66543
No 19
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A
Probab=86.13 E-value=1.4 Score=41.64 Aligned_cols=82 Identities=15% Similarity=0.071 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCChHHHHHHHHhhhhhccCCCCCC--CCCccC---h---------------hhHHHHH
Q 012766 316 ERLFGAAVAFVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREP--QPMALK---V---------------SARANWN 375 (457)
Q Consensus 316 EErFeaAVefVksLPk~G~vsqLS~DdKLeLYGLYKQATeGDCn~p--KPG~fD---~---------------VGRAKWn 375 (457)
.--|.++..-|-. |.+ ..+.++-+.|=||--||..||.+.. .|+.++ + -...=..
T Consensus 115 ~l~y~Q~~~dil~----G~~-~c~~e~a~~LAAl~~q~e~Gd~~~~~~~~~~l~~~~l~~~lP~~~~~~~~~~~~~~I~~ 189 (322)
T 4dxa_B 115 LILFDEARYNLLK----GFY-TAPDAKLITLASLLLQIVYGNYESKKHKQGFLNEENLKSIVPVTKLKSKAPHWTNRILH 189 (322)
T ss_dssp HHHHHHHHHHHHH----TCC-CCCHHHHHHHHHHHHHHHHCSCCHHHHSSSCSCHHHHTTTSCTTTTTTTGGGSHHHHHH
T ss_pred HHHHHHHHHHHHC----Ccc-cCCHHHHHHHHHHHHHHHhCCCCcccccccccchhhhhhhCCHHHHhcCHHHHHHHHHH
Confidence 3345666665543 232 5688999999999999999998642 343321 0 0122347
Q ss_pred HHHHc---CCCChH--HHHHHHHHHHHhhCccc
Q 012766 376 AWKQL---GNMTPE--IAMEQYVTILSRSIPGC 403 (457)
Q Consensus 376 AWKaL---KGMSKE--EAMkKYIELVeeLiP~W 403 (457)
+|+++ .|||++ +|+.+|++++.++ |.|
T Consensus 190 ~h~~~~~~~g~s~~~a~a~~~yL~~~~~l-p~y 221 (322)
T 4dxa_B 190 EYKNLSTSEGVSKEMHHLQRMFLQNCWEI-PTY 221 (322)
T ss_dssp HHHHHHC--CCCCCHHHHHHHHHHHHHTS-TTT
T ss_pred HHHhcccccCCChhHHHHHHHHHHHHhcC-CCc
Confidence 89999 999985 4699999998754 555
No 20
>2al6_A Focal adhesion kinase 1; transferase; 2.35A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 2j0m_A* 2aeh_A
Probab=83.08 E-value=1.5 Score=42.56 Aligned_cols=83 Identities=13% Similarity=0.165 Sum_probs=55.1
Q ss_pred HHHHHHHHHHH-HhhccCCCCCCCCChHHHHHHHHhhhhhccCCCCCCCC----C---------ccC-----h-------
Q 012766 315 LERLFGAAVAF-VGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQP----M---------ALK-----V------- 368 (457)
Q Consensus 315 LEErFeaAVef-VksLPk~G~vsqLS~DdKLeLYGLYKQATeGDCn~pKP----G---------~fD-----~------- 368 (457)
+.--|.++..- ++.. +...+.++-+.|-+|--|+..||++...+ + .-. +
T Consensus 114 ~~~~y~Q~r~Dil~g~-----~~~~~~e~al~LAaL~~q~~~gD~~~~~~~~k~~~~~l~k~~~l~~flP~~~~~~~~~~ 188 (375)
T 2al6_A 114 LNFFYQQVKNDYMLEI-----ADQVDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRFFPKSLLDSVKAK 188 (375)
T ss_dssp HHHHHHHHHHHHHHHT-----TTTSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHTTCGGGTSCHHHHHSSCHH
T ss_pred HHHHHHHHHHHHHcCC-----CccCCHHHHHHHHHHHHHHHhhhccchhhcccCCHHHhhhcccHHHhCCHHHHHHhChH
Confidence 44556666553 4322 12368899999999999999999853211 0 001 1
Q ss_pred -hhHHHHHHHHHcCCCChHHHHHHHHHHHHhhCccc
Q 012766 369 -SARANWNAWKQLGNMTPEIAMEQYVTILSRSIPGC 403 (457)
Q Consensus 369 -VGRAKWnAWKaLKGMSKEEAMkKYIELVeeLiP~W 403 (457)
..+.=...|+++.||++++||-+|++++.+ +|.|
T Consensus 189 ~~~k~I~~~~k~~~g~s~~eAk~~yL~~~~~-l~~y 223 (375)
T 2al6_A 189 TLRKLIQQTFRQFANLNREESILKFFEILSP-VYRF 223 (375)
T ss_dssp HHHHHHHHHHHTTTTCCHHHHHHHHHHHHTT-TCCC
T ss_pred HHHHHHHHHHHHhhCCCHHHHHHHHHHHHhh-cccC
Confidence 011113678889999999999999999987 4644
No 21
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=73.81 E-value=8.9 Score=40.50 Aligned_cols=83 Identities=14% Similarity=0.094 Sum_probs=54.6
Q ss_pred HHHHHHHHHHhhccCCCCCCCCChH-HHHHHHHhhhhhccCCCCCCC----------CCc-cCh-hhHHHH-----HHHH
Q 012766 317 RLFGAAVAFVGNKCNAGRISSIGSD-VKMQLYGLHKIATVGPCREPQ----------PMA-LKV-SARANW-----NAWK 378 (457)
Q Consensus 317 ErFeaAVefVksLPk~G~vsqLS~D-dKLeLYGLYKQATeGDCn~pK----------PG~-fD~-VGRAKW-----nAWK 378 (457)
--|.++..-|-. |.+ ..+.+ +...|=||.-||..||+.... |.. +.- .....| .+|+
T Consensus 372 LlYlQ~k~dIl~----Grl-pc~~E~~a~~LAAl~~Qae~Gd~~~~~~~~~~L~~~lP~~~l~~~~~~~~w~~~I~~~hk 446 (655)
T 3pvl_A 372 LIYQQVVRGVKF----GEY-RCEKEDDLAELASQQYFVDYGSEMILERLLSLVPTYIPDREITPLKNLEKWAQLAIAAHK 446 (655)
T ss_dssp HHHHHHHHHHHH----TSS-CCSSHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHSCGGGCCSSSCHHHHHHHHHHHHH
T ss_pred HHHHHHhccccc----Ccc-CCChHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHhCCHHHHhccCCHHHHHHHHHHHHH
Confidence 345555555432 333 34544 889999999999999986421 211 111 123344 5788
Q ss_pred Hc----CCCChHHHHHHHHHHHHhhCcccc
Q 012766 379 QL----GNMTPEIAMEQYVTILSRSIPGCI 404 (457)
Q Consensus 379 aL----KGMSKEEAMkKYIELVeeLiP~W~ 404 (457)
++ +|||+.+|+.+|++++..-+|-|-
T Consensus 447 k~~~~~~g~s~~eAk~~yL~~a~~~lp~YG 476 (655)
T 3pvl_A 447 KGIYAQRRTDSQKVKEDVVNYARFKWPLLF 476 (655)
T ss_dssp HHHHTTCSSCHHHHHHHHHHHHHHHCTTTS
T ss_pred hhhccccCCCHHHHHHHHHHHHHHhccccC
Confidence 88 999999999999999954556553
No 22
>4eku_A Protein-tyrosine kinase 2-beta; proline-rich tyrosine kinase 2, FERM domain, transferase; 3.25A {Homo sapiens}
Probab=66.96 E-value=7.3 Score=38.67 Aligned_cols=88 Identities=11% Similarity=0.121 Sum_probs=58.1
Q ss_pred chHHHHHHHHHH-HHhhccCCCCCCCCChHHHHHHHHhhhhhccCCCCCCC----C---------C---cc--Chhh---
Q 012766 313 TELERLFGAAVA-FVGNKCNAGRISSIGSDVKMQLYGLHKIATVGPCREPQ----P---------M---AL--KVSA--- 370 (457)
Q Consensus 313 sELEErFeaAVe-fVksLPk~G~vsqLS~DdKLeLYGLYKQATeGDCn~pK----P---------G---~f--D~VG--- 370 (457)
..++--|.++.. +++... ...+.++-++|-+|--|+-.||.+... + + ++ ++..
T Consensus 132 ~~~~ylY~Q~r~D~l~g~~-----~~~~~e~al~LAaL~~q~~~gd~~~~a~~~k~~~~~l~k~~~lk~flP~~l~~~ik 206 (392)
T 4eku_A 132 TTLLYFYQQLRNDYMQRYA-----SKVSEGMALQLGCLELRRFFKDMPHNALDKKSNFELLEKEVGLDLFFPKQMQENLK 206 (392)
T ss_dssp HHHHHHHHHHHHHHHHHTT-----TTSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHHTCGGGTSCHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHcCCC-----CCCCHHHHHHHHHHHHHHHhhhcchhhhccCCCHHHHhhhccHHHhcCHHHHhhcC
Confidence 345556766655 444331 246888999999999999999876411 0 0 01 1111
Q ss_pred -----HHHHHHHHHcCCCChHHHHHHHHHHHHhhCcccccC
Q 012766 371 -----RANWNAWKQLGNMTPEIAMEQYVTILSRSIPGCIQD 406 (457)
Q Consensus 371 -----RAKWnAWKaLKGMSKEEAMkKYIELVeeLiP~W~e~ 406 (457)
+.=...++++.||+..+||.+|+..+.++ |.|...
T Consensus 207 ~k~~rk~I~~~~kk~~~ls~~eakl~YL~~l~~L-p~yG~e 246 (392)
T 4eku_A 207 PKQFRKMIQQTFQQYASLREEECVMKFFNTLAGF-ANIDQE 246 (392)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTS-SCCSCE
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh-hccCcE
Confidence 11124677789999999999999999987 777544
No 23
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=24.32 E-value=69 Score=32.88 Aligned_cols=61 Identities=18% Similarity=0.279 Sum_probs=45.5
Q ss_pred CChHHHHHHHHhhhhhccCCCCCCC-------------CCccCh-----h--hHHH------HHHHHHcCCCChHHHHHH
Q 012766 338 IGSDVKMQLYGLHKIATVGPCREPQ-------------PMALKV-----S--ARAN------WNAWKQLGNMTPEIAMEQ 391 (457)
Q Consensus 338 LS~DdKLeLYGLYKQATeGDCn~pK-------------PG~fD~-----V--GRAK------WnAWKaLKGMSKEEAMkK 391 (457)
.+.+.-|.|-+|--|+..||++..+ -|.-.+ . -+.| .+.|+++.++++++||-+
T Consensus 133 ~~~~~al~La~l~~~~~~~d~~~~a~~~~~~~~~~~k~~~~~~fiP~~~~~~~~~~~~~k~i~~~~k~~~~~~~~~~~lk 212 (656)
T 2j0j_A 133 VDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRFFPKSLLDSVKAKTLRKLIQQTFRQFANLNREESILK 212 (656)
T ss_dssp SCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHTTTGGGTSCHHHHHHSCHHHHHHHHHHHHGGGTTCCHHHHHHH
T ss_pred ccHhHHHHHHHHHHHHHhhhccchhhhcCCCHHHHHhhccHHHhCCHHHHHHhhhhHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 6789999999999999999995431 110011 0 1122 578899999999999999
Q ss_pred HHHHHHh
Q 012766 392 YVTILSR 398 (457)
Q Consensus 392 YIELVee 398 (457)
|++.+..
T Consensus 213 ~l~~l~~ 219 (656)
T 2j0j_A 213 FFEILSP 219 (656)
T ss_dssp HHHHHGG
T ss_pred HHHHhcc
Confidence 9998887
Done!