Query 012767
Match_columns 456
No_of_seqs 322 out of 2456
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 06:05:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012767.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012767hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0205 Plasma membrane H+-tra 100.0 7.5E-98 2E-102 757.1 28.4 446 1-456 318-942 (942)
2 COG0474 MgtA Cation transport 100.0 7.9E-71 1.7E-75 615.4 30.2 398 1-402 339-775 (917)
3 KOG0202 Ca2+ transporting ATPa 100.0 5.1E-67 1.1E-71 547.3 30.0 377 1-378 323-792 (972)
4 KOG0204 Calcium transporting A 100.0 6.3E-67 1.4E-71 546.0 25.6 442 1-455 426-918 (1034)
5 TIGR01647 ATPase-IIIA_H plasma 100.0 3.2E-65 6.9E-70 561.9 38.8 352 1-363 277-631 (755)
6 PRK15122 magnesium-transportin 100.0 2E-64 4.4E-69 563.2 38.2 355 1-363 360-735 (903)
7 PRK10517 magnesium-transportin 100.0 3.1E-64 6.7E-69 561.0 38.0 355 1-363 362-735 (902)
8 TIGR01524 ATPase-IIIB_Mg magne 100.0 2.2E-63 4.8E-68 553.9 39.5 355 1-363 327-700 (867)
9 TIGR01523 ATPase-IID_K-Na pota 100.0 1.1E-63 2.4E-68 563.3 35.1 371 1-372 350-859 (1053)
10 TIGR01517 ATPase-IIB_Ca plasma 100.0 9.1E-63 2E-67 554.5 36.0 360 1-363 367-767 (941)
11 TIGR01106 ATPase-IIC_X-K sodiu 100.0 1.5E-61 3.3E-66 546.5 35.6 362 1-363 335-782 (997)
12 TIGR01116 ATPase-IIA1_Ca sarco 100.0 5.9E-60 1.3E-64 530.1 35.2 370 1-372 280-738 (917)
13 TIGR01522 ATPase-IIA2_Ca golgi 100.0 5.5E-59 1.2E-63 521.0 35.1 352 1-363 315-716 (884)
14 TIGR01657 P-ATPase-V P-type AT 100.0 1.6E-59 3.5E-64 533.0 31.1 360 1-363 439-895 (1054)
15 PRK14010 potassium-transportin 100.0 4.6E-57 9.9E-62 484.7 31.9 286 1-339 289-575 (673)
16 TIGR01652 ATPase-Plipid phosph 100.0 6.9E-57 1.5E-61 512.5 29.4 340 1-342 350-843 (1057)
17 PRK01122 potassium-transportin 100.0 1.5E-55 3.3E-60 473.3 34.1 285 1-337 289-577 (679)
18 PLN03190 aminophospholipid tra 100.0 1.8E-54 4E-59 490.4 32.0 334 2-337 445-941 (1178)
19 KOG0203 Na+/K+ ATPase, alpha s 100.0 1.4E-55 3.1E-60 460.5 14.7 362 1-363 357-804 (1019)
20 TIGR01497 kdpB K+-transporting 100.0 1.4E-52 3E-57 449.6 32.3 287 1-338 290-579 (675)
21 COG2217 ZntA Cation transport 100.0 1.9E-52 4.1E-57 449.6 31.6 314 2-383 397-710 (713)
22 KOG0207 Cation transport ATPas 100.0 1E-50 2.3E-55 429.7 29.1 341 2-396 574-915 (951)
23 KOG0206 P-type ATPase [General 100.0 9.5E-50 2.1E-54 439.9 16.8 334 3-338 380-865 (1151)
24 PRK11033 zntA zinc/cadmium/mer 100.0 3.8E-46 8.2E-51 409.6 31.4 311 1-383 427-739 (741)
25 KOG0208 Cation transport ATPas 100.0 4.6E-46 1E-50 394.5 22.1 259 78-339 600-926 (1140)
26 TIGR01494 ATPase_P-type ATPase 100.0 1.2E-44 2.6E-49 383.7 31.1 261 2-348 222-482 (499)
27 KOG0210 P-type ATPase [Inorgan 100.0 1.3E-46 2.9E-51 385.0 14.4 329 3-337 400-851 (1051)
28 PRK10671 copA copper exporting 100.0 5.6E-43 1.2E-47 390.8 31.4 321 2-384 509-831 (834)
29 TIGR01525 ATPase-IB_hvy heavy 100.0 3.4E-41 7.3E-46 361.2 32.9 290 1-350 237-530 (556)
30 TIGR01511 ATPase-IB1_Cu copper 100.0 3E-41 6.4E-46 361.3 30.4 283 1-351 268-550 (562)
31 TIGR01512 ATPase-IB2_Cd heavy 100.0 3.5E-40 7.7E-45 351.6 28.8 295 1-379 237-533 (536)
32 COG2216 KdpB High-affinity K+ 100.0 1.8E-39 4E-44 324.8 21.8 272 2-324 291-566 (681)
33 KOG0209 P-type ATPase [Inorgan 100.0 6.3E-40 1.4E-44 341.5 15.5 287 7-297 476-836 (1160)
34 PF00702 Hydrolase: haloacid d 100.0 4.7E-29 1E-33 234.2 11.3 211 10-287 1-215 (215)
35 COG4087 Soluble P-type ATPase 99.6 1.2E-15 2.6E-20 128.5 10.1 116 165-309 20-138 (152)
36 PRK11133 serB phosphoserine ph 99.2 6.1E-11 1.3E-15 118.8 10.8 131 175-320 181-316 (322)
37 TIGR02137 HSK-PSP phosphoserin 99.2 9.7E-11 2.1E-15 109.9 11.2 131 175-322 68-198 (203)
38 PRK01158 phosphoglycolate phos 99.1 1.5E-10 3.2E-15 110.3 9.3 145 176-320 21-226 (230)
39 PRK10513 sugar phosphate phosp 99.1 1.7E-10 3.6E-15 112.8 8.9 66 255-320 196-265 (270)
40 COG0561 Cof Predicted hydrolas 99.1 8.3E-10 1.8E-14 107.6 12.3 143 176-321 21-259 (264)
41 PRK15126 thiamin pyrimidine py 99.1 5.1E-10 1.1E-14 109.7 10.1 66 255-320 188-259 (272)
42 TIGR00338 serB phosphoserine p 99.1 6.7E-10 1.4E-14 105.1 10.3 129 175-318 85-218 (219)
43 TIGR01487 SPP-like sucrose-pho 99.0 3.8E-10 8.3E-15 106.7 7.3 144 175-318 18-214 (215)
44 PRK10976 putative hydrolase; P 99.0 1.2E-09 2.6E-14 106.6 10.7 66 255-320 190-261 (266)
45 TIGR01670 YrbI-phosphatas 3-de 99.0 1.2E-09 2.7E-14 98.0 9.7 105 183-319 36-145 (154)
46 TIGR02726 phenyl_P_delta pheny 99.0 1.1E-09 2.3E-14 99.8 9.2 103 182-314 41-145 (169)
47 TIGR01482 SPP-subfamily Sucros 99.0 1.4E-09 3E-14 103.2 9.6 146 175-320 15-222 (225)
48 PF08282 Hydrolase_3: haloacid 98.9 5.5E-09 1.2E-13 99.7 11.1 147 173-319 13-254 (254)
49 COG0560 SerB Phosphoserine pho 98.9 2.8E-09 6.2E-14 100.6 8.5 115 174-308 76-200 (212)
50 PLN02887 hydrolase family prot 98.9 1.5E-08 3.2E-13 108.7 13.0 66 255-320 507-576 (580)
51 PRK10530 pyridoxal phosphate ( 98.9 1.3E-08 2.7E-13 99.5 11.6 66 255-320 199-268 (272)
52 PRK09484 3-deoxy-D-manno-octul 98.8 1.2E-08 2.6E-13 94.2 9.1 110 182-323 55-172 (183)
53 TIGR00099 Cof-subfamily Cof su 98.8 1.2E-08 2.7E-13 98.9 8.5 64 255-318 188-255 (256)
54 PF13246 Hydrolase_like2: Puta 98.8 9.3E-09 2E-13 83.9 6.3 64 57-121 20-89 (91)
55 PRK13582 thrH phosphoserine ph 98.8 5.3E-08 1.2E-12 91.0 11.5 128 175-320 68-196 (205)
56 COG1778 Low specificity phosph 98.8 1.5E-08 3.3E-13 88.7 6.5 114 183-328 43-164 (170)
57 TIGR01486 HAD-SF-IIB-MPGP mann 98.7 8.5E-08 1.9E-12 93.1 11.6 66 255-320 176-253 (256)
58 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.7 4.7E-08 1E-12 90.8 9.3 117 175-304 80-200 (201)
59 PRK03669 mannosyl-3-phosphogly 98.6 3.8E-07 8.3E-12 89.4 12.5 67 254-320 186-265 (271)
60 PRK00192 mannosyl-3-phosphogly 98.6 2.7E-07 5.9E-12 90.5 11.1 66 255-320 190-267 (273)
61 TIGR03333 salvage_mtnX 2-hydro 98.6 4.7E-07 1E-11 85.6 10.7 111 174-293 69-182 (214)
62 KOG1615 Phosphoserine phosphat 98.5 2.3E-07 5E-12 84.1 7.1 109 176-293 89-199 (227)
63 PLN02954 phosphoserine phospha 98.5 1.6E-06 3.4E-11 82.2 11.7 130 176-317 85-221 (224)
64 PF12710 HAD: haloacid dehalog 98.4 6.3E-07 1.4E-11 82.5 7.5 92 178-284 92-192 (192)
65 PRK09552 mtnX 2-hydroxy-3-keto 98.4 2.1E-06 4.5E-11 81.4 9.7 109 175-292 74-185 (219)
66 TIGR01488 HAD-SF-IB Haloacid D 98.3 1.1E-06 2.5E-11 79.8 7.1 98 176-286 74-177 (177)
67 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.3 1.6E-06 3.5E-11 80.8 8.1 109 173-294 85-198 (202)
68 TIGR01489 DKMTPPase-SF 2,3-dik 98.3 2.1E-06 4.5E-11 78.7 8.6 114 174-291 71-186 (188)
69 PRK13222 phosphoglycolate phos 98.3 8.5E-06 1.8E-10 77.1 12.1 126 174-322 92-224 (226)
70 TIGR01485 SPP_plant-cyano sucr 98.3 4.2E-06 9.2E-11 80.9 9.7 147 174-320 20-244 (249)
71 COG0546 Gph Predicted phosphat 98.2 1.7E-05 3.8E-10 75.3 11.3 126 173-319 87-217 (220)
72 TIGR01454 AHBA_synth_RP 3-amin 98.1 1.9E-05 4.2E-10 73.8 10.3 124 175-319 75-203 (205)
73 TIGR02471 sucr_syn_bact_C sucr 98.1 6E-06 1.3E-10 79.1 6.1 68 254-321 158-233 (236)
74 PLN02382 probable sucrose-phos 98.0 2.5E-05 5.5E-10 81.1 10.5 71 250-320 168-257 (413)
75 PRK08238 hypothetical protein; 98.0 0.00012 2.6E-09 77.4 14.7 98 175-297 72-169 (479)
76 cd01427 HAD_like Haloacid deha 98.0 2.1E-05 4.5E-10 67.1 7.4 118 171-291 20-138 (139)
77 PRK13288 pyrophosphatase PpaX; 97.9 7.7E-05 1.7E-09 70.2 10.1 123 176-319 83-210 (214)
78 TIGR01449 PGP_bact 2-phosphogl 97.9 7.1E-05 1.5E-09 70.1 9.8 122 175-317 85-211 (213)
79 TIGR02461 osmo_MPG_phos mannos 97.9 5.3E-05 1.2E-09 72.3 8.7 44 173-216 13-56 (225)
80 PRK13223 phosphoglycolate phos 97.9 0.0001 2.2E-09 72.5 10.8 125 174-319 100-229 (272)
81 PRK10187 trehalose-6-phosphate 97.8 0.00016 3.5E-09 70.8 11.1 140 175-320 36-241 (266)
82 PRK10826 2-deoxyglucose-6-phos 97.8 0.00014 2.9E-09 69.0 9.3 122 174-316 91-216 (222)
83 TIGR02463 MPGP_rel mannosyl-3- 97.7 0.00016 3.4E-09 68.5 9.2 38 178-215 19-56 (221)
84 TIGR03351 PhnX-like phosphonat 97.7 0.00025 5.3E-09 67.0 10.1 125 174-317 86-217 (220)
85 KOG4383 Uncharacterized conser 97.7 0.00032 7E-09 74.2 11.4 131 163-293 814-1019(1354)
86 PRK13226 phosphoglycolate phos 97.7 0.00028 6E-09 67.4 9.9 124 175-319 95-224 (229)
87 PRK11590 hypothetical protein; 97.6 0.00028 6.1E-09 66.5 9.4 105 175-294 95-203 (211)
88 PRK12702 mannosyl-3-phosphogly 97.6 0.00023 5E-09 69.8 8.3 42 175-216 18-59 (302)
89 TIGR01544 HAD-SF-IE haloacid d 97.6 0.00079 1.7E-08 65.9 12.0 127 174-319 120-273 (277)
90 PRK13478 phosphonoacetaldehyde 97.5 0.00089 1.9E-08 65.4 11.2 96 175-288 101-197 (267)
91 TIGR01422 phosphonatase phosph 97.5 0.0011 2.4E-08 64.1 11.3 97 175-289 99-196 (253)
92 PRK13225 phosphoglycolate phos 97.5 0.00098 2.1E-08 65.5 11.0 121 175-319 142-267 (273)
93 PLN03243 haloacid dehalogenase 97.4 0.0009 2E-08 65.3 10.5 116 175-309 109-226 (260)
94 PLN02770 haloacid dehalogenase 97.4 0.0011 2.4E-08 64.1 10.7 117 175-310 108-228 (248)
95 TIGR01545 YfhB_g-proteo haloac 97.4 0.00071 1.5E-08 63.9 8.8 106 175-293 94-201 (210)
96 PRK06698 bifunctional 5'-methy 97.4 0.001 2.2E-08 70.3 10.9 124 175-322 330-456 (459)
97 COG4030 Uncharacterized protei 97.4 0.00095 2.1E-08 62.3 9.2 144 176-320 84-262 (315)
98 PRK14501 putative bifunctional 97.4 0.0016 3.5E-08 72.7 12.6 61 254-320 656-721 (726)
99 PRK11587 putative phosphatase; 97.3 0.0016 3.5E-08 61.5 9.8 115 175-309 83-199 (218)
100 TIGR01484 HAD-SF-IIB HAD-super 97.2 0.0011 2.4E-08 61.7 8.1 39 175-213 17-55 (204)
101 TIGR01548 HAD-SF-IA-hyp1 haloa 97.2 0.00063 1.4E-08 63.2 6.0 94 173-286 104-197 (197)
102 TIGR02253 CTE7 HAD superfamily 97.1 0.0019 4E-08 60.9 8.6 98 175-293 94-195 (221)
103 PRK11009 aphA acid phosphatase 97.1 0.0015 3.3E-08 62.7 7.8 90 174-289 113-206 (237)
104 PHA02530 pseT polynucleotide k 97.1 0.0023 5.1E-08 63.4 9.2 110 171-291 183-293 (300)
105 PF13419 HAD_2: Haloacid dehal 97.0 0.00092 2E-08 59.6 5.3 98 174-290 76-173 (176)
106 TIGR01428 HAD_type_II 2-haloal 97.0 0.0024 5.1E-08 59.2 7.8 95 175-290 92-188 (198)
107 TIGR01672 AphA HAD superfamily 97.0 0.0018 3.8E-08 62.3 6.9 89 175-289 114-206 (237)
108 PLN02779 haloacid dehalogenase 97.0 0.0034 7.3E-08 62.1 9.1 117 175-309 144-264 (286)
109 COG4359 Uncharacterized conser 97.0 0.0022 4.7E-08 58.1 6.7 112 175-292 73-184 (220)
110 PRK14988 GMP/IMP nucleotidase; 97.0 0.0024 5.2E-08 60.8 7.6 99 175-294 93-195 (224)
111 PRK06769 hypothetical protein; 97.0 0.0025 5.3E-08 58.2 7.3 121 141-292 3-135 (173)
112 PRK08942 D,D-heptose 1,7-bisph 96.9 0.008 1.7E-07 55.1 9.9 127 176-320 30-177 (181)
113 TIGR01668 YqeG_hyp_ppase HAD s 96.9 0.0055 1.2E-07 55.7 8.8 110 136-290 19-132 (170)
114 PLN02575 haloacid dehalogenase 96.8 0.0099 2.1E-07 60.9 11.1 120 175-315 216-337 (381)
115 TIGR01662 HAD-SF-IIIA HAD-supe 96.8 0.005 1.1E-07 53.2 7.6 93 175-290 25-127 (132)
116 PTZ00174 phosphomannomutase; P 96.8 0.00096 2.1E-08 64.5 3.2 59 249-307 180-245 (247)
117 TIGR02254 YjjG/YfnB HAD superf 96.8 0.0056 1.2E-07 57.5 8.3 119 175-317 97-222 (224)
118 PF05116 S6PP: Sucrose-6F-phos 96.7 0.0067 1.5E-07 58.7 8.7 68 254-321 164-244 (247)
119 TIGR01990 bPGM beta-phosphoglu 96.7 0.0031 6.8E-08 57.4 5.9 94 175-289 87-180 (185)
120 TIGR02009 PGMB-YQAB-SF beta-ph 96.6 0.0044 9.6E-08 56.4 6.5 94 174-290 87-182 (185)
121 TIGR01509 HAD-SF-IA-v3 haloaci 96.6 0.0069 1.5E-07 54.9 7.8 95 175-289 85-179 (183)
122 PLN02580 trehalose-phosphatase 96.6 0.022 4.7E-07 58.4 11.9 67 250-320 293-374 (384)
123 PRK09449 dUMP phosphatase; Pro 96.5 0.013 2.8E-07 55.3 8.9 123 175-319 95-222 (224)
124 PLN02940 riboflavin kinase 96.4 0.012 2.6E-07 60.7 8.4 116 175-309 93-212 (382)
125 TIGR01685 MDP-1 magnesium-depe 96.3 0.019 4.2E-07 52.5 8.5 112 165-292 35-155 (174)
126 smart00775 LNS2 LNS2 domain. T 96.3 0.036 7.7E-07 49.8 9.8 102 173-289 25-141 (157)
127 smart00577 CPDc catalytic doma 96.2 0.0084 1.8E-07 53.2 5.4 95 175-291 45-139 (148)
128 TIGR00213 GmhB_yaeD D,D-heptos 96.2 0.019 4.2E-07 52.3 7.9 121 176-308 27-169 (176)
129 TIGR01261 hisB_Nterm histidino 96.2 0.014 3E-07 52.7 6.7 98 175-292 29-145 (161)
130 TIGR01656 Histidinol-ppas hist 96.2 0.012 2.6E-07 52.1 6.2 98 175-290 27-141 (147)
131 TIGR01549 HAD-SF-IA-v1 haloaci 96.1 0.018 4E-07 50.8 7.1 90 176-287 65-154 (154)
132 TIGR02252 DREG-2 REG-2-like, H 96.0 0.017 3.6E-07 53.7 6.9 95 175-289 105-200 (203)
133 COG2179 Predicted hydrolase of 95.9 0.051 1.1E-06 48.7 8.7 113 131-289 17-133 (175)
134 PF06888 Put_Phosphatase: Puta 95.8 0.047 1E-06 52.3 8.9 101 175-283 71-186 (234)
135 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.6 0.083 1.8E-06 50.7 9.7 48 168-215 17-66 (242)
136 TIGR01533 lipo_e_P4 5'-nucleot 95.6 0.069 1.5E-06 52.2 9.1 87 173-284 116-205 (266)
137 PRK14502 bifunctional mannosyl 95.5 0.012 2.5E-07 64.2 3.8 40 176-215 434-473 (694)
138 PLN02811 hydrolase 95.4 0.038 8.2E-07 52.2 6.8 101 175-292 78-182 (220)
139 PRK05446 imidazole glycerol-ph 95.4 0.039 8.5E-07 56.1 6.9 99 174-292 29-146 (354)
140 TIGR00685 T6PP trehalose-phosp 95.2 0.03 6.4E-07 54.0 5.1 64 252-319 164-239 (244)
141 PLN02205 alpha,alpha-trehalose 95.1 0.11 2.3E-06 59.1 9.9 37 175-211 616-653 (854)
142 PLN02919 haloacid dehalogenase 95.1 0.11 2.4E-06 60.4 10.3 125 176-320 162-292 (1057)
143 TIGR01691 enolase-ppase 2,3-di 95.0 0.066 1.4E-06 50.9 6.9 100 172-292 92-194 (220)
144 PLN03017 trehalose-phosphatase 94.9 0.54 1.2E-05 48.0 13.5 63 133-209 102-166 (366)
145 TIGR01664 DNA-3'-Pase DNA 3'-p 94.9 0.1 2.2E-06 47.3 7.5 94 176-290 43-158 (166)
146 TIGR01681 HAD-SF-IIIC HAD-supe 94.8 0.1 2.2E-06 45.1 7.1 39 175-213 29-68 (128)
147 PRK10563 6-phosphogluconate ph 94.8 0.064 1.4E-06 50.5 6.2 97 175-292 88-184 (221)
148 PF13344 Hydrolase_6: Haloacid 94.4 0.11 2.3E-06 43.0 5.9 48 168-215 7-57 (101)
149 TIGR02247 HAD-1A3-hyp Epoxide 94.4 0.077 1.7E-06 49.5 5.7 98 174-290 93-192 (211)
150 KOG3120 Predicted haloacid deh 94.4 0.12 2.7E-06 48.4 6.7 139 127-293 56-209 (256)
151 TIGR01675 plant-AP plant acid 94.3 0.13 2.8E-06 49.1 7.0 88 173-281 118-210 (229)
152 PRK09456 ?-D-glucose-1-phospha 93.6 0.19 4.1E-06 46.6 6.7 95 175-290 84-181 (199)
153 TIGR01686 FkbH FkbH-like domai 93.1 0.24 5.1E-06 49.8 6.9 91 175-293 31-129 (320)
154 COG3769 Predicted hydrolase (H 93.1 0.33 7.1E-06 45.6 7.1 38 179-216 27-64 (274)
155 PRK10725 fructose-1-P/6-phosph 92.6 0.27 5.7E-06 44.8 5.9 91 180-290 92-182 (188)
156 TIGR01993 Pyr-5-nucltdase pyri 92.3 0.22 4.8E-06 45.4 5.0 98 175-290 84-181 (184)
157 PF09419 PGP_phosphatase: Mito 92.1 0.64 1.4E-05 42.2 7.5 107 137-287 36-157 (168)
158 PLN02645 phosphoglycolate phos 91.7 0.41 8.8E-06 47.9 6.5 48 168-215 37-87 (311)
159 PHA02597 30.2 hypothetical pro 91.4 0.41 8.9E-06 44.1 5.8 93 175-292 74-172 (197)
160 PLN02177 glycerol-3-phosphate 90.2 4.2 9.2E-05 43.4 12.7 98 176-294 111-215 (497)
161 COG0637 Predicted phosphatase/ 90.2 0.81 1.8E-05 43.4 6.7 101 173-292 84-184 (221)
162 PF03767 Acid_phosphat_B: HAD 89.9 0.71 1.5E-05 44.2 6.0 89 175-282 115-207 (229)
163 PLN02423 phosphomannomutase 89.3 0.4 8.6E-06 46.3 3.9 48 250-298 182-236 (245)
164 PRK10748 flavin mononucleotide 89.3 1.1 2.4E-05 42.8 7.0 91 175-292 113-206 (238)
165 COG1011 Predicted hydrolase (H 89.1 1.5 3.4E-05 40.9 7.7 121 175-319 99-226 (229)
166 TIGR01493 HAD-SF-IA-v2 Haloaci 85.5 1.3 2.7E-05 39.8 4.6 85 175-285 90-174 (175)
167 PF08235 LNS2: LNS2 (Lipin/Ned 84.8 5 0.00011 36.0 7.9 102 174-289 26-141 (157)
168 TIGR02251 HIF-SF_euk Dullard-l 84.7 1.2 2.5E-05 40.2 3.9 92 175-291 42-136 (162)
169 TIGR01452 PGP_euk phosphoglyco 84.3 4.1 9E-05 39.9 8.0 48 168-215 11-61 (279)
170 TIGR01680 Veg_Stor_Prot vegeta 84.0 5.8 0.00013 38.8 8.6 43 173-215 143-188 (275)
171 TIGR01458 HAD-SF-IIA-hyp3 HAD- 83.5 2 4.3E-05 41.7 5.3 118 178-318 123-253 (257)
172 TIGR01512 ATPase-IB2_Cd heavy 83.2 24 0.00052 38.1 14.0 164 124-364 361-529 (536)
173 TIGR01684 viral_ppase viral ph 82.3 2.5 5.3E-05 41.9 5.3 41 176-216 146-187 (301)
174 PRK10444 UMP phosphatase; Prov 81.3 1.7 3.6E-05 42.1 3.8 45 168-212 10-54 (248)
175 TIGR02244 HAD-IG-Ncltidse HAD 81.0 6 0.00013 40.2 7.8 37 177-213 186-223 (343)
176 TIGR01457 HAD-SF-IIA-hyp2 HAD- 80.9 2.9 6.4E-05 40.3 5.4 48 168-215 10-60 (249)
177 PF05822 UMPH-1: Pyrimidine 5' 80.5 16 0.00036 35.2 10.1 132 174-319 89-241 (246)
178 TIGR01663 PNK-3'Pase polynucle 80.1 4.7 0.0001 43.4 7.0 40 176-215 198-249 (526)
179 TIGR01458 HAD-SF-IIA-hyp3 HAD- 79.6 2.4 5.1E-05 41.2 4.3 48 168-215 10-64 (257)
180 PHA03398 viral phosphatase sup 79.4 3.5 7.5E-05 40.9 5.3 40 176-215 148-188 (303)
181 TIGR01525 ATPase-IB_hvy heavy 74.7 56 0.0012 35.4 13.6 48 318-365 502-552 (556)
182 PTZ00174 phosphomannomutase; P 74.0 5.4 0.00012 38.3 5.0 35 175-209 22-56 (247)
183 PRK11033 zntA zinc/cadmium/mer 73.9 50 0.0011 37.3 13.3 161 124-363 567-730 (741)
184 COG2217 ZntA Cation transport 73.9 1.2E+02 0.0025 34.2 15.8 162 123-363 535-701 (713)
185 TIGR01689 EcbF-BcbF capsule bi 71.6 4.7 0.0001 34.8 3.5 32 174-205 23-54 (126)
186 PTZ00445 p36-lilke protein; Pr 71.4 11 0.00024 35.5 6.1 64 127-203 28-103 (219)
187 COG1877 OtsB Trehalose-6-phosp 68.6 27 0.00059 34.2 8.5 68 136-214 12-80 (266)
188 KOG3040 Predicted sugar phosph 67.6 11 0.00024 35.3 5.2 51 165-215 13-66 (262)
189 COG0241 HisB Histidinol phosph 67.2 22 0.00048 32.7 7.1 103 176-289 32-144 (181)
190 COG3700 AphA Acid phosphatase 66.6 12 0.00026 34.3 5.0 90 176-292 115-210 (237)
191 TIGR01459 HAD-SF-IIA-hyp4 HAD- 64.2 5.7 0.00012 38.0 2.8 92 177-290 140-237 (242)
192 TIGR01456 CECR5 HAD-superfamil 61.8 28 0.00061 34.9 7.5 48 168-215 9-64 (321)
193 COG0647 NagD Predicted sugar p 60.7 10 0.00022 37.1 3.9 46 167-212 16-61 (269)
194 PLN02151 trehalose-phosphatase 60.6 18 0.00039 36.9 5.8 62 255-320 269-342 (354)
195 PF12689 Acid_PPase: Acid Phos 60.2 30 0.00064 31.5 6.6 40 176-215 46-86 (169)
196 PRK14502 bifunctional mannosyl 59.7 15 0.00033 40.6 5.3 42 253-294 611-658 (694)
197 PRK00208 thiG thiazole synthas 57.1 1.9E+02 0.0042 28.0 14.7 51 161-211 90-143 (250)
198 PF12710 HAD: haloacid dehalog 56.5 4.8 0.0001 36.3 0.8 13 13-25 1-13 (192)
199 PRK14194 bifunctional 5,10-met 55.5 40 0.00086 33.6 7.1 145 172-316 12-216 (301)
200 TIGR02250 FCP1_euk FCP1-like p 55.5 23 0.0005 31.6 5.0 42 174-216 57-98 (156)
201 PF00389 2-Hacid_dh: D-isomer 54.8 1.3E+02 0.0029 25.4 10.8 36 257-293 52-89 (133)
202 PF13380 CoA_binding_2: CoA bi 51.0 16 0.00034 30.9 3.0 80 132-215 18-104 (116)
203 cd04728 ThiG Thiazole synthase 49.7 1.3E+02 0.0029 29.0 9.3 51 161-211 90-143 (248)
204 PF02358 Trehalose_PPase: Treh 48.9 17 0.00037 34.4 3.3 56 255-310 165-234 (235)
205 COG2503 Predicted secreted aci 48.3 81 0.0018 30.5 7.5 86 175-285 122-211 (274)
206 PF13242 Hydrolase_like: HAD-h 47.0 20 0.00043 27.4 2.8 51 258-308 12-70 (75)
207 CHL00200 trpA tryptophan synth 44.7 1.2E+02 0.0025 29.7 8.4 29 254-282 188-216 (263)
208 PF14336 DUF4392: Domain of un 44.6 69 0.0015 31.8 6.9 38 178-215 63-101 (291)
209 TIGR01452 PGP_euk phosphoglyco 43.6 71 0.0015 31.1 6.8 33 259-291 211-244 (279)
210 PRK14179 bifunctional 5,10-met 42.9 92 0.002 30.8 7.4 65 247-311 136-210 (284)
211 KOG2914 Predicted haloacid-hal 42.4 87 0.0019 29.8 6.9 100 176-292 93-194 (222)
212 PF06506 PrpR_N: Propionate ca 42.2 94 0.002 28.1 7.0 107 179-331 65-172 (176)
213 KOG3085 Predicted hydrolase (H 41.8 66 0.0014 30.9 6.0 103 178-302 116-222 (237)
214 TIGR03849 arch_ComA phosphosul 40.8 54 0.0012 31.5 5.2 69 177-272 40-118 (237)
215 TIGR01460 HAD-SF-IIA Haloacid 40.8 37 0.00081 32.3 4.2 48 168-215 7-58 (236)
216 COG0279 GmhA Phosphoheptose is 40.1 82 0.0018 28.6 5.9 59 126-208 95-153 (176)
217 cd01917 ACS_2 Acetyl-CoA synth 38.4 1.2E+02 0.0026 29.8 7.2 138 177-323 140-283 (287)
218 cd02067 B12-binding B12 bindin 37.4 40 0.00088 28.1 3.5 80 135-215 21-104 (119)
219 PRK15108 biotin synthase; Prov 36.8 3.8E+02 0.0082 27.2 11.0 116 128-280 79-200 (345)
220 COG0078 ArgF Ornithine carbamo 36.5 2.9E+02 0.0062 27.7 9.5 59 136-215 65-123 (310)
221 PRK10527 hypothetical protein; 36.3 54 0.0012 28.3 4.0 50 335-389 6-55 (125)
222 PRK14170 bifunctional 5,10-met 34.9 2E+02 0.0044 28.5 8.3 45 172-216 10-63 (284)
223 PRK14184 bifunctional 5,10-met 34.8 2.4E+02 0.0052 27.9 8.8 64 247-310 135-212 (286)
224 cd02071 MM_CoA_mut_B12_BD meth 33.7 43 0.00094 28.3 3.1 80 135-215 21-104 (122)
225 cd00860 ThrRS_anticodon ThrRS 33.3 83 0.0018 24.3 4.6 47 169-215 6-53 (91)
226 TIGR02471 sucr_syn_bact_C sucr 33.3 36 0.00077 32.1 2.8 35 180-215 20-54 (236)
227 PLN02591 tryptophan synthase 33.3 2.2E+02 0.0047 27.6 8.2 28 253-280 174-201 (250)
228 PRK02261 methylaspartate mutas 33.1 46 0.001 29.0 3.2 81 135-215 25-114 (137)
229 PRK14174 bifunctional 5,10-met 32.8 1.1E+02 0.0025 30.3 6.3 63 248-310 138-214 (295)
230 PRK09529 bifunctional acetyl-C 32.7 2E+02 0.0044 31.8 8.4 140 178-325 149-294 (711)
231 TIGR01501 MthylAspMutase methy 32.5 98 0.0021 27.0 5.1 80 136-215 24-112 (134)
232 PRK14169 bifunctional 5,10-met 31.7 1.9E+02 0.0041 28.6 7.5 65 247-311 134-208 (282)
233 cd05017 SIS_PGI_PMI_1 The memb 30.9 87 0.0019 26.1 4.5 36 177-214 56-91 (119)
234 PLN02151 trehalose-phosphatase 30.3 1.1E+02 0.0024 31.3 5.8 60 136-209 92-153 (354)
235 COG2832 Uncharacterized protei 29.8 72 0.0016 27.1 3.6 51 333-388 4-54 (119)
236 PRK11840 bifunctional sulfur c 29.6 1.5E+02 0.0032 30.0 6.4 51 161-211 164-217 (326)
237 PLN02645 phosphoglycolate phos 29.5 1.1E+02 0.0024 30.3 5.8 59 259-319 239-307 (311)
238 cd02072 Glm_B12_BD B12 binding 28.1 63 0.0014 27.9 3.2 80 136-215 22-110 (128)
239 PRK04017 hypothetical protein; 28.0 1.9E+02 0.0041 25.2 6.0 58 257-314 10-78 (132)
240 COG1778 Low specificity phosph 27.9 37 0.00081 30.5 1.7 26 4-29 2-27 (170)
241 KOG2882 p-Nitrophenyl phosphat 27.8 97 0.0021 30.8 4.7 48 168-215 31-81 (306)
242 TIGR02370 pyl_corrinoid methyl 27.8 37 0.0008 31.5 1.8 79 135-215 106-188 (197)
243 PLN02423 phosphomannomutase 27.8 90 0.0019 29.9 4.5 30 175-205 24-53 (245)
244 PF03129 HGTP_anticodon: Antic 27.4 92 0.002 24.5 3.9 48 168-215 3-54 (94)
245 PF08645 PNK3P: Polynucleotide 27.0 55 0.0012 29.2 2.7 23 177-199 31-53 (159)
246 cd02070 corrinoid_protein_B12- 27.0 43 0.00094 31.1 2.1 79 135-215 104-186 (201)
247 PRK14172 bifunctional 5,10-met 26.6 2.9E+02 0.0063 27.3 7.8 65 247-311 136-210 (278)
248 PF06941 NT5C: 5' nucleotidase 26.6 59 0.0013 29.7 2.9 28 175-202 73-100 (191)
249 PRK13670 hypothetical protein; 26.4 1.9E+02 0.0042 29.9 6.9 97 165-285 2-112 (388)
250 TIGR00262 trpA tryptophan synt 26.2 3.9E+02 0.0085 25.8 8.7 39 174-212 123-163 (256)
251 TIGR00216 ispH_lytB (E)-4-hydr 26.0 5.1E+02 0.011 25.6 9.4 154 110-294 74-263 (280)
252 PF12017 Tnp_P_element: Transp 25.8 1.1E+02 0.0023 29.5 4.5 37 180-216 198-234 (236)
253 cd05014 SIS_Kpsf KpsF-like pro 25.5 72 0.0016 26.6 3.1 27 177-203 60-86 (128)
254 COG0309 HypE Hydrogenase matur 25.0 2.8E+02 0.0061 28.1 7.5 84 169-274 219-306 (339)
255 cd04724 Tryptophan_synthase_al 25.0 1.4E+02 0.003 28.6 5.3 24 257-280 176-199 (242)
256 cd00859 HisRS_anticodon HisRS 24.0 1.3E+02 0.0029 22.7 4.2 47 169-215 6-53 (91)
257 TIGR00288 conserved hypothetic 23.7 5.4E+02 0.012 23.1 11.2 93 130-275 43-137 (160)
258 PRK14178 bifunctional 5,10-met 23.6 2.2E+02 0.0047 28.2 6.3 65 247-311 130-204 (279)
259 PLN03064 alpha,alpha-trehalose 23.2 2.2E+02 0.0048 33.1 7.2 39 176-214 623-662 (934)
260 PRK01045 ispH 4-hydroxy-3-meth 23.1 5.7E+02 0.012 25.5 9.2 44 110-153 74-125 (298)
261 cd05008 SIS_GlmS_GlmD_1 SIS (S 23.1 82 0.0018 26.2 3.0 27 177-203 59-85 (126)
262 COG4229 Predicted enolase-phos 23.0 2.2E+02 0.0047 26.4 5.7 32 172-203 100-131 (229)
263 PRK10886 DnaA initiator-associ 22.8 3.2E+02 0.007 25.3 7.1 27 177-203 122-148 (196)
264 PF02219 MTHFR: Methylenetetra 22.7 83 0.0018 30.9 3.3 39 165-203 72-111 (287)
265 PRK13938 phosphoheptose isomer 22.5 1.6E+02 0.0034 27.4 4.9 27 177-203 126-152 (196)
266 COG1832 Predicted CoA-binding 22.5 1.4E+02 0.0031 26.2 4.2 35 165-199 17-51 (140)
267 cd06167 LabA_like LabA_like pr 22.1 3.1E+02 0.0068 23.4 6.6 27 257-283 113-139 (149)
268 cd01994 Alpha_ANH_like_IV This 22.1 3.7E+02 0.008 24.8 7.3 37 179-215 11-60 (194)
269 KOG0207 Cation transport ATPas 21.8 5.1E+02 0.011 29.9 9.3 81 123-209 721-802 (951)
270 PF02679 ComA: (2R)-phospho-3- 21.6 1.3E+02 0.0029 29.0 4.3 107 176-311 52-169 (244)
271 PF12218 End_N_terminal: N ter 21.5 37 0.00081 25.4 0.4 21 272-292 1-26 (67)
272 PF03031 NIF: NLI interacting 21.4 1.1E+02 0.0023 26.8 3.5 38 176-214 37-74 (159)
273 PRK13111 trpA tryptophan synth 21.4 7.5E+02 0.016 23.9 12.0 27 254-280 186-212 (258)
274 PRK00856 pyrB aspartate carbam 21.0 3.8E+02 0.0083 26.7 7.7 39 177-215 87-125 (305)
275 PRK00652 lpxK tetraacyldisacch 20.9 2.2E+02 0.0048 28.7 6.0 57 258-314 70-154 (325)
276 PRK06846 putative deaminase; V 20.8 8.9E+02 0.019 24.8 10.7 158 132-294 118-310 (410)
277 COG4996 Predicted phosphatase 20.7 2.3E+02 0.0051 24.8 5.1 54 162-215 22-81 (164)
278 COG2022 ThiG Uncharacterized e 20.5 7.7E+02 0.017 23.8 8.9 49 160-208 96-147 (262)
279 PRK00414 gmhA phosphoheptose i 20.3 2.3E+02 0.005 26.0 5.5 27 177-203 124-150 (192)
280 PRK15424 propionate catabolism 20.0 9.4E+02 0.02 26.1 10.9 70 179-278 95-165 (538)
No 1
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.5e-98 Score=757.14 Aligned_cols=446 Identities=74% Similarity=1.091 Sum_probs=426.2
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcce
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQ 80 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~ 80 (456)
|+|||+|+++|++|+|||||||.|+++|++..++++.++.++|+++++|+++++.+|+|+||+|++++++||++++.+|+
T Consensus 318 mtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ik 397 (942)
T KOG0205|consen 318 MTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIK 397 (942)
T ss_pred HHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCce
Confidence 78999999999999999999999999999998889999999999999999999999999999999999999999999999
Q ss_pred EEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCC
Q 012767 81 EVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESS 160 (456)
Q Consensus 81 ~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~ 160 (456)
+++|+||||++||++.+|.+++|++++++||+|++|+++|+.+.++++.+++.+++|+++|+|.|+||++.+|++.+++.
T Consensus 398 evhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~ 477 (942)
T KOG0205|consen 398 EVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESP 477 (942)
T ss_pred EEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHH
Q 012767 161 GSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240 (456)
Q Consensus 161 e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~ 240 (456)
+.+|+|+|++++.||||+++.++|++....|+.|.|+|||....++++++++|+++|++|+..+.|.+.++.+...+.++
T Consensus 478 g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~e 557 (942)
T KOG0205|consen 478 GGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDE 557 (942)
T ss_pred CCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 241 ~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
++++++.||.++|+||+++|+.||++||.|+|+|||+||+|+||+||+|||+.+++|+|+.++|||+++|+++.|+.++.
T Consensus 558 lie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avl 637 (942)
T KOG0205|consen 558 LIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (942)
T ss_pred HhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-------------------------------------------------------------
Q 012767 321 ISRAIFQRMRNYMVRGIDG------------------------------------------------------------- 339 (456)
Q Consensus 321 ~~R~i~~~i~~~~~y~~~~------------------------------------------------------------- 339 (456)
.||.+|+||++|.+|++..
T Consensus 638 tSraIfqrmknytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifatg 717 (942)
T KOG0205|consen 638 TSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATG 717 (942)
T ss_pred HHHHHHHHHhhheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhheee
Confidence 9999999999999987722
Q ss_pred ---------------------------------------HHHHHHHHHHH------------------------------
Q 012767 340 ---------------------------------------LSSTEFIQVLE------------------------------ 350 (456)
Q Consensus 340 ---------------------------------------~~~~i~l~~~~------------------------------ 350 (456)
++.++|+++|+
T Consensus 718 vVlgtyma~~tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~~ 797 (942)
T KOG0205|consen 718 VVLGTYMAIMTVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFFA 797 (942)
T ss_pred eEehhHHHHHHHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHHH
Confidence 44444555444
Q ss_pred ----------------------------------HhhhhhHHHHHHH---------------HHhcccCccccchHHHHH
Q 012767 351 ----------------------------------LNFLFTLDTVIAI---------------LQTAFTSKKDFGKEEREL 381 (456)
Q Consensus 351 ----------------------------------~~~~~pl~~~~~l---------------~~~~~~~~~~~~~~~~~~ 381 (456)
+..|+|++.+.+. .+++|+++++||.+.++.
T Consensus 798 aqliatliavya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~~~~~kk~~~~~~~~a 877 (942)
T KOG0205|consen 798 AQLIATLIAVYANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKTAFTTKKDYGKEEREA 877 (942)
T ss_pred HHHHHHHHHHHheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcchhhhccccchhhhhh
Confidence 4467788877774 467899999999999999
Q ss_pred HHHHhhhhhhcCCCCCCccccccccccccchhHHHHHhhhhHHhhhhhhcccchhhhhhhhcCCCHhhhhhcccC
Q 012767 382 LWAHAQRTLHGLQPPDTSMFSVRSSYGELSWMAEEARRRAEIARLRELHTLKGHVESLIRLKGLDIDAIQQSYSV 456 (456)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (456)
+|+..||++||+++++ -+++|+++++++||+|++|+|++|+||+|+|||+||||+|++++ |||||
T Consensus 878 ~~~~~qrt~~~lq~~~---------~~~~~~~a~~~~~~ae~~r~~e~~~l~g~vesv~klk~~d~~~~-~~~t~ 942 (942)
T KOG0205|consen 878 QWALAQRTLHGLQPPE---------GRELSEIAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETI-QHYTV 942 (942)
T ss_pred HHHHhhhhhcccCCCc---------cchhhHHHHHHhhhhhhhhccchhhhhhhhHhhhhhcccchhhh-hhccC
Confidence 9999999999999995 16899999999999999999999999999999999999999999 99997
No 2
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.9e-71 Score=615.45 Aligned_cols=398 Identities=31% Similarity=0.449 Sum_probs=322.5
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCC---------hHHHHHHHHHhcccC--------CCChHHH
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVD---------ADTVVLMAARASQVE--------NLDVIDA 63 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~---------~~~il~~aa~~~~~~--------~~~pi~~ 63 (456)
|.++|+||++|+||||||||||+|+|+|.++++.....+.+ ...++..++.|+... ..||.|.
T Consensus 339 l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~ 418 (917)
T COG0474 339 LNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEG 418 (917)
T ss_pred cchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceecCCccHH
Confidence 57999999999999999999999999999988652011122 112455555665322 3589999
Q ss_pred HHHHhhcC------chhhhhcceEEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccC-------CchhhhHH
Q 012767 64 AIVGMLAD------PKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN-------KSKIGRKV 130 (456)
Q Consensus 64 ai~~~~~~------~~~~~~~~~~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~-------~~~~~~~~ 130 (456)
||+.++.+ ....+..+++++.+||+|.+|||++++++.+|+++.++|||||.|+++|.. .++..+.+
T Consensus 419 Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~ 498 (917)
T COG0474 419 ALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTL 498 (917)
T ss_pred HHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHH
Confidence 99988753 333445567799999999999999999977777899999999999999963 34566788
Q ss_pred HHHHHHHHHccCeeeEEeeeecCCCCc----CCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH
Q 012767 131 NAVINKFAERGLRSLAVAYQEVPEGSK----ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAK 206 (456)
Q Consensus 131 ~~~i~~~~~~Glr~l~vA~~~~~~~~~----~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~ 206 (456)
....++|+++|+|++++||+.++.... +..|+++.|+|+++|+||||++++++|+.|+++||+|||+|||+..||+
T Consensus 499 ~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~ 578 (917)
T COG0474 499 EEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAI 578 (917)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHH
Confidence 999999999999999999998765543 5789999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhc
Q 012767 207 ETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKA 286 (456)
Q Consensus 207 ~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~A 286 (456)
+||++||+..+.....+++|.+.+...+. ++.+.+++..+|||++|+||..+|+.||++|+.|+|+|||+||+||||+|
T Consensus 579 aIa~~~Gi~~~~~~~~vi~G~el~~l~~~-el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~A 657 (917)
T COG0474 579 AIAKECGIEAEAESALVIDGAELDALSDE-ELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAA 657 (917)
T ss_pred HHHHHcCCCCCCCceeEeehHHhhhcCHH-HHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhc
Confidence 99999999876544457778776543333 56678888899999999999999999999999999999999999999999
Q ss_pred CeeEEec-cccHHHhhcccEEeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHh--hhhhHHHHHH
Q 012767 287 DIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQ-VLELN--FLFTLDTVIA 362 (456)
Q Consensus 287 dvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~-~~~~~--~~~pl~~~~~ 362 (456)
||||||+ +|+|+++++||+++++++|..|..++.+||++|+|+++++.|.+..+...++.+ ++.++ ..+|+.+.++
T Consensus 658 DVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~ql 737 (917)
T COG0474 658 DVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQL 737 (917)
T ss_pred CccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHH
Confidence 9999999 699999999999999999999999999999999999999999987655533333 33333 2368999999
Q ss_pred H-HHhcccCccccchHHHHHHHHHhhhhhhcCCCCCCcccc
Q 012767 363 I-LQTAFTSKKDFGKEERELLWAHAQRTLHGLQPPDTSMFS 402 (456)
Q Consensus 363 l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (456)
+ .++.++..+.+..+.....|....++ .+.|.+.+|+
T Consensus 738 l~inll~d~~pa~~L~~~~~~~~~m~~~---~~~p~~~i~~ 775 (917)
T COG0474 738 LWINLLTDSLPALALGVEDPESDVMKRP---PRGPEEGLFN 775 (917)
T ss_pred HHHHHHHhhhhhheeecCCCcccccccC---CCCccccccc
Confidence 8 66666666665543333333333333 3344444554
No 3
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-67 Score=547.26 Aligned_cols=377 Identities=27% Similarity=0.415 Sum_probs=303.3
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeeccc-----------CCCC------------------h---HHHHHH
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFA-----------GGVD------------------A---DTVVLM 48 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~-----------~~~~------------------~---~~il~~ 48 (456)
|.++|+||.+++||+|||||||+|+|+|.+.++.... .+++ . .+++.+
T Consensus 323 LPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i 402 (972)
T KOG0202|consen 323 LPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEI 402 (972)
T ss_pred ccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHHHHHHHHH
Confidence 5689999999999999999999999999998762110 0111 1 133444
Q ss_pred HHHhccc-----C------CCChHHHHHHHhhc-----Cch---h-----------hhhcceEEEeecCCCCCceEEEEE
Q 012767 49 AARASQV-----E------NLDVIDAAIVGMLA-----DPK---E-----------ARADIQEVHFLPFDPTGKRTALTY 98 (456)
Q Consensus 49 aa~~~~~-----~------~~~pi~~ai~~~~~-----~~~---~-----------~~~~~~~~~~~pf~~~~k~~~v~~ 98 (456)
++.|... . ...|.|.||...+. +.. . ....++.+..+||++.+|+|++.+
T Consensus 403 ~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c 482 (972)
T KOG0202|consen 403 CALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKC 482 (972)
T ss_pred HHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEE
Confidence 5554321 1 23588889876542 111 0 123345568999999999999999
Q ss_pred EecCCc--EEEEEcCcHHHHHhhcc------------CCchhhhHHHHHHHHHHHccCeeeEEeeeecCCC---------
Q 012767 99 IDSEGK--MHRVTKGSPEQILNLLH------------NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG--------- 155 (456)
Q Consensus 99 ~~~~g~--~~~~~KGa~e~Il~~~~------------~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~--------- 155 (456)
.+..+. ...|.|||+|.|+++|+ .++..++.+.+...+|.++|+|+|++|++..|..
T Consensus 483 ~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~ 562 (972)
T KOG0202|consen 483 SPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLND 562 (972)
T ss_pred ecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhcc
Confidence 876664 68899999999999994 1234567888899999999999999999977631
Q ss_pred --CcCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccccCCchhh
Q 012767 156 --SKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALSGQDRDE 231 (456)
Q Consensus 156 --~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~--~~~~l~g~~~~~ 231 (456)
.+...|.+++|+|++++.||||++++++|+.|+++||+|+|+|||+.+||++||+++|+..+.. ....++|.+.++
T Consensus 563 ~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ 642 (972)
T KOG0202|consen 563 TSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDD 642 (972)
T ss_pred cccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhc
Confidence 2445789999999999999999999999999999999999999999999999999999986543 446677877664
Q ss_pred hhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEec-cccHHHhhcccEEeeCC
Q 012767 232 SIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEP 310 (456)
Q Consensus 232 ~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~ 310 (456)
+...+.++.+....+|+|++|+||.+||+.||++|..|+|+|||+||+||||.|||||||| +|||+||+|||+||.|+
T Consensus 643 -ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DD 721 (972)
T KOG0202|consen 643 -LSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADD 721 (972)
T ss_pred -CCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecC
Confidence 3334456778888899999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHh-hhhhHHHHHHH-HHhcccCccccchHH
Q 012767 311 GLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQ-VLELN-FLFTLDTVIAI-LQTAFTSKKDFGKEE 378 (456)
Q Consensus 311 ~l~~i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~-~~~~~-~~~pl~~~~~l-~~~~~~~~~~~~~~~ 378 (456)
||+.|+.+|++||.+|.||++|+.|.+..+..++.+. ++..+ ...||.++++| .+.....+|.-+.+-
T Consensus 722 nFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ 792 (972)
T KOG0202|consen 722 NFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGF 792 (972)
T ss_pred cHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCC
Confidence 9999999999999999999999999997655544433 34444 55899999999 556666665544433
No 4
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-67 Score=546.02 Aligned_cols=442 Identities=22% Similarity=0.311 Sum_probs=338.4
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCC--------CChH--HHHHHH-HHhcc-------------cC
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGG--------VDAD--TVVLMA-ARASQ-------------VE 56 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~--------~~~~--~il~~a-a~~~~-------------~~ 56 (456)
|+|||+||.+++||+|||||||+|.|+|.+.++....+. .++. +++..+ +..+. ..
T Consensus 426 L~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~ 505 (1034)
T KOG0204|consen 426 LDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQ 505 (1034)
T ss_pred hHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccc
Confidence 689999999999999999999999999999887432211 2221 122111 11111 01
Q ss_pred CCChHHHHHHHhhc----CchhhhhcceEEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccC----------
Q 012767 57 NLDVIDAAIVGMLA----DPKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN---------- 122 (456)
Q Consensus 57 ~~~pi~~ai~~~~~----~~~~~~~~~~~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~---------- 122 (456)
..+|.++||+++.. +....|...++++++||||.+|+|+++++.++|..+.++|||+|.++..|..
T Consensus 506 ~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~ 585 (1034)
T KOG0204|consen 506 LGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVP 585 (1034)
T ss_pred cCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEee
Confidence 23699999998753 4455677788999999999999999999977776349999999999999962
Q ss_pred -CchhhhHHHHHHHHHHHccCeeeEEeeeecCCC-------C-cCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCe
Q 012767 123 -KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG-------S-KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLG 193 (456)
Q Consensus 123 -~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~-------~-~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~ 193 (456)
+++-...++..|+.|+.+|+|++|+||++++.. + .+.++.+++++|+++++||.|||++++|+.|+.+||.
T Consensus 586 ~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGIt 665 (1034)
T KOG0204|consen 586 FNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGIT 665 (1034)
T ss_pred CCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcE
Confidence 233445889999999999999999999985432 1 1345789999999999999999999999999999999
Q ss_pred EEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEe
Q 012767 194 VKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMI 273 (456)
Q Consensus 194 v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~i 273 (456)
|.|+||||..||++||.+|||.+..-+-..+.|.+.. .+.+.+.++++.+..++||.+|.||+-+|+.|+++|++|+.+
T Consensus 666 VRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr-~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVT 744 (1034)
T KOG0204|consen 666 VRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFR-ELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVT 744 (1034)
T ss_pred EEEEeCCcHHHHHHHHHHcccccCCCccceecchhhh-hcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEe
Confidence 9999999999999999999998876666778887776 445566788999999999999999999999999999999999
Q ss_pred cCCCCchhhhhhcCeeEEec-cccHHHhhcccEEeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 012767 274 GNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELN 352 (456)
Q Consensus 274 GDG~ND~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~ 352 (456)
|||.||+|||++||||.||| .||++||++|||||+++||++|+.++.|||.+|.||+||+.|.+..+..|+...+...+
T Consensus 745 GDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~ 824 (1034)
T KOG0204|consen 745 GDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSAC 824 (1034)
T ss_pred cCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhh
Confidence 99999999999999999999 89999999999999999999999999999999999999999988765555555443322
Q ss_pred --hhhhHHHHHHH-HHhcccCccccchHHHHHHHHHhhhhhhcCCCCCCccccccccccccchhHHHHHhhhhHHhhhhh
Q 012767 353 --FLFTLDTVIAI-LQTAFTSKKDFGKEERELLWAHAQRTLHGLQPPDTSMFSVRSSYGELSWMAEEARRRAEIARLREL 429 (456)
Q Consensus 353 --~~~pl~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (456)
.-.||..+|+| .++.+-....+..+.+.+.-....|.+.|...| +-.+++++.+ .-+...|+--+
T Consensus 825 ~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~----LIt~tMwkni--------l~qa~YQl~vl 892 (1034)
T KOG0204|consen 825 ATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKP----LITRTMWKNI--------LGQAVYQLIVL 892 (1034)
T ss_pred hcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCc----chHHHHHHHH--------HHHHHHHHHHH
Confidence 55899999998 333332221111111101111223444555554 2233333322 24566667777
Q ss_pred hcccchhhhhhhhcCCCHhhhhhccc
Q 012767 430 HTLKGHVESLIRLKGLDIDAIQQSYS 455 (456)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (456)
-.|...-++...+.+.+-..-.+|||
T Consensus 893 ~iL~F~G~~if~~~~~~~~~~~~~nT 918 (1034)
T KOG0204|consen 893 FILNFAGKSIFGLNGPLHSPPSVHNT 918 (1034)
T ss_pred HHHHhcchhhhccCCCCCCchhhhee
Confidence 77777777776666665544445555
No 5
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=3.2e-65 Score=561.91 Aligned_cols=352 Identities=55% Similarity=0.865 Sum_probs=299.4
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcce
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQ 80 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~ 80 (456)
++++|+||++|+||||||||||+|+|+|.+++. ...+.+.++++.+++.++...+.||+|.|++.++.+....+..++
T Consensus 277 l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~--~~~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~ 354 (755)
T TIGR01647 277 LTAIEELAGMDILCSDKTGTLTLNKLSIDEILP--FFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYK 354 (755)
T ss_pred cHHHHhccCCcEEEecCCCccccCceEEEEEEe--cCCCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCc
Confidence 579999999999999999999999999998653 222367788888888776555667999999998776554556788
Q ss_pred EEEeecCCCCCceEEEEEEecC-CcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCC
Q 012767 81 EVHFLPFDPTGKRTALTYIDSE-GKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKES 159 (456)
Q Consensus 81 ~~~~~pf~~~~k~~~v~~~~~~-g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~ 159 (456)
.++++||++.+|+|++++.+.+ |+.++++||+|+.++++|....+.++.+.+.+++++.+|+|++++|+++
T Consensus 355 ~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~-------- 426 (755)
T TIGR01647 355 VLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD-------- 426 (755)
T ss_pred eEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------
Confidence 8999999999999998887653 7778899999999999998766667788888999999999999999973
Q ss_pred CCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccc-cCCchhhhhhcCCh
Q 012767 160 SGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSAL-SGQDRDESIVALPV 238 (456)
Q Consensus 160 ~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l-~g~~~~~~~~~~~~ 238 (456)
.|++|+|+|+++|+|||||+++++|+.|+++||+|+|+|||++.+|.++|+++||..+.+....+ .|.+ .+.+...++
T Consensus 427 ~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~-~~~~~~~~~ 505 (755)
T TIGR01647 427 EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDN-RDDLPSGEL 505 (755)
T ss_pred CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcc-hhhCCHHHH
Confidence 25789999999999999999999999999999999999999999999999999997543322222 2221 123333457
Q ss_pred HHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHH
Q 012767 239 DELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITA 318 (456)
Q Consensus 239 ~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~ 318 (456)
++++++.++||+++|+||.++|+.||++|++|+|+|||+||+|||++|||||||++|+|+|+++||+||++++|+.|+.+
T Consensus 506 ~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~a 585 (755)
T TIGR01647 506 GEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDA 585 (755)
T ss_pred HHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHH
Confidence 78888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhhhhHHHHHHH
Q 012767 319 VLISRAIFQRMRNYMVRGIDGLSSTEFI-QVLELNFLFTLDTVIAI 363 (456)
Q Consensus 319 i~~~R~i~~~i~~~~~y~~~~~~~~i~l-~~~~~~~~~pl~~~~~l 363 (456)
+++||++|+||++|+.|.+..++..++. .++.++..+|+++++++
T Consensus 586 i~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~~l~~~~il 631 (755)
T TIGR01647 586 ILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVV 631 (755)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCcchhHHHHH
Confidence 9999999999999999998765544432 33333344678888877
No 6
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=2e-64 Score=563.18 Aligned_cols=355 Identities=28% Similarity=0.453 Sum_probs=297.0
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhccc--CCCChHHHHHHHhhcCch--hhh
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQV--ENLDVIDAAIVGMLADPK--EAR 76 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~--~~~~pi~~ai~~~~~~~~--~~~ 76 (456)
++++|+||++|+||||||||||+|+|+|.+.+. ..+.+.++++.+++.++.. ...||+|.|++.++.... ..+
T Consensus 360 l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~---~~~~~~~~~l~~a~l~s~~~~~~~~p~e~All~~a~~~~~~~~~ 436 (903)
T PRK15122 360 LNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKP 436 (903)
T ss_pred cchhhhhcCCcEEEecCCcccccCeEEEEEEEc---CCCCChHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHcCchhhh
Confidence 579999999999999999999999999998542 2234456677777654322 234799999998875432 123
Q ss_pred hcceEEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccC----------CchhhhHHHHHHHHHHHccCeeeE
Q 012767 77 ADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLA 146 (456)
Q Consensus 77 ~~~~~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~----------~~~~~~~~~~~i~~~~~~Glr~l~ 146 (456)
..++.++.+||++.+|+|++++++.+|+++.++||+|+.|+++|.. +++..+.+.+.+++++.+|+|+++
T Consensus 437 ~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvla 516 (903)
T PRK15122 437 AGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLL 516 (903)
T ss_pred hcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEE
Confidence 4678899999999999999988876788889999999999999962 112345567778899999999999
Q ss_pred EeeeecCCCCc-----CCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCC
Q 012767 147 VAYQEVPEGSK-----ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS 221 (456)
Q Consensus 147 vA~~~~~~~~~-----~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~ 221 (456)
+||+.++..+. +..|++++|+|+++|+|||||+++++|+.|+++||+|+|+|||++.+|.++|+++||.. .
T Consensus 517 vA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~----~ 592 (903)
T PRK15122 517 VATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP----G 592 (903)
T ss_pred EEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC----C
Confidence 99998765331 23577899999999999999999999999999999999999999999999999999963 3
Q ss_pred ccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhh
Q 012767 222 SALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARS 301 (456)
Q Consensus 222 ~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~ 301 (456)
.++.|.+.+. +...++.+.+++.++|||++|+||.++|+.||++|++|+|+|||+||+|||++|||||||++|+|+|++
T Consensus 593 ~vi~G~el~~-~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdvAke 671 (903)
T PRK15122 593 EPLLGTEIEA-MDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVDSGADIAKE 671 (903)
T ss_pred CccchHhhhh-CCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeCcccHHHHH
Confidence 4667766543 333456778888899999999999999999999999999999999999999999999999999999999
Q ss_pred cccEEeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-HhhhhhHHHHHHH
Q 012767 302 AADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQV-LE-LNFLFTLDTVIAI 363 (456)
Q Consensus 302 aaDivl~~~~l~~i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~-~~-~~~~~pl~~~~~l 363 (456)
+||+||++++|+.|+.++++||++|+||++|+.|.+..++..++..+ .. +..++|+.++++|
T Consensus 672 aADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil 735 (903)
T PRK15122 672 SADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLL 735 (903)
T ss_pred hcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHH
Confidence 99999999999999999999999999999999999876554433322 22 2355799999998
No 7
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=3.1e-64 Score=561.04 Aligned_cols=355 Identities=29% Similarity=0.466 Sum_probs=298.0
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccC--CCChHHHHHHHhhcCch--hhh
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVE--NLDVIDAAIVGMLADPK--EAR 76 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~--~~~pi~~ai~~~~~~~~--~~~ 76 (456)
++++|+||++|+||||||||||+|+|+|.+.. . ..+.+.++++.+++.++... ..||+|.|++.++.... ...
T Consensus 362 l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~-~--~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~~~ 438 (902)
T PRK10517 362 LDAIQNFGAMDILCTDKTGTLTQDKIVLENHT-D--ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSLA 438 (902)
T ss_pred chhhhhccCCCEEEecCCCccccceEEEEEEe-c--CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhhhh
Confidence 57999999999999999999999999998753 1 22445677888777655432 35799999998765321 234
Q ss_pred hcceEEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccC----------CchhhhHHHHHHHHHHHccCeeeE
Q 012767 77 ADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLA 146 (456)
Q Consensus 77 ~~~~~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~----------~~~~~~~~~~~i~~~~~~Glr~l~ 146 (456)
..|+.++.+||++.+|+|++++.+.++....++||+||.|+++|.. +++..+.+.+..++++++|+|+++
T Consensus 439 ~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvla 518 (902)
T PRK10517 439 SRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVA 518 (902)
T ss_pred hcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEE
Confidence 5678899999999999999988766677789999999999999963 112345567778899999999999
Q ss_pred EeeeecCCCCcC---CCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCcc
Q 012767 147 VAYQEVPEGSKE---SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSA 223 (456)
Q Consensus 147 vA~~~~~~~~~~---~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~ 223 (456)
+||++++..+.+ ..|++++|+|+++|+|||||+++++|+.|+++||+|+|+|||++.+|.++|+++||.. ..+
T Consensus 519 vA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~----~~v 594 (902)
T PRK10517 519 VATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA----GEV 594 (902)
T ss_pred EEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----cCc
Confidence 999987643221 2367999999999999999999999999999999999999999999999999999952 346
Q ss_pred ccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcc
Q 012767 224 LSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAA 303 (456)
Q Consensus 224 l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aa 303 (456)
+.|.+.+ .+...++++.+++..+|||++|+||.++|+.||++|++|+|+|||+||+|||++|||||||++|+|+|+++|
T Consensus 595 ~~G~el~-~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAkeaA 673 (902)
T PRK10517 595 LIGSDIE-TLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAA 673 (902)
T ss_pred eeHHHHH-hCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHHhC
Confidence 6776654 234445777888999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH-hhhhhHHHHHHH
Q 012767 304 DIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQV-LEL-NFLFTLDTVIAI 363 (456)
Q Consensus 304 Divl~~~~l~~i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~-~~~-~~~~pl~~~~~l 363 (456)
|+||++++|..|+.++++||++|+||++|+.|.+..++..++..+ +.+ ..++|+.++++|
T Consensus 674 DiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL 735 (902)
T PRK10517 674 DIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLL 735 (902)
T ss_pred CEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHH
Confidence 999999999999999999999999999999999876665544443 222 345799999998
No 8
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=2.2e-63 Score=553.91 Aligned_cols=355 Identities=27% Similarity=0.444 Sum_probs=296.3
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccC--CCChHHHHHHHhhcCc--hhhh
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVE--NLDVIDAAIVGMLADP--KEAR 76 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~--~~~pi~~ai~~~~~~~--~~~~ 76 (456)
++++|+||++|+||||||||||+|+|+|.+.+. ..+.+.++++.+++.++... ..||+|.|++.++.+. ...+
T Consensus 327 l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~---~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~~ 403 (867)
T TIGR01524 327 LSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTA 403 (867)
T ss_pred chhhhhccCccEEEecCCCccccCeEEEEEEec---CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhHh
Confidence 579999999999999999999999999988531 23445677777777654422 2479999999887542 1234
Q ss_pred hcceEEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccC----------CchhhhHHHHHHHHHHHccCeeeE
Q 012767 77 ADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN----------KSKIGRKVNAVINKFAERGLRSLA 146 (456)
Q Consensus 77 ~~~~~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~----------~~~~~~~~~~~i~~~~~~Glr~l~ 146 (456)
..++.++.+||++.+|+|++++.+.++..+.++||+|+.++++|.. +++..+.+.+.+++++++|+|+++
T Consensus 404 ~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvla 483 (867)
T TIGR01524 404 SRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIA 483 (867)
T ss_pred hcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEE
Confidence 5678889999999999999988765556788999999999999962 122345677888999999999999
Q ss_pred EeeeecCCCCc---CCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCcc
Q 012767 147 VAYQEVPEGSK---ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSA 223 (456)
Q Consensus 147 vA~~~~~~~~~---~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~ 223 (456)
+|+++++..+. +..|++++|+|+++|+|||||+++++|++|+++||+|+|+|||+..+|.++|+++||.+ ..+
T Consensus 484 vA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~~v 559 (867)
T TIGR01524 484 VATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA----NDF 559 (867)
T ss_pred EEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----CCe
Confidence 99998765432 12477899999999999999999999999999999999999999999999999999963 245
Q ss_pred ccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcc
Q 012767 224 LSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAA 303 (456)
Q Consensus 224 l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aa 303 (456)
+.|.+.++ +...++.+.+++.++|||++|+||.++|+.||++|++|+|+|||+||+|||++|||||||++|+|+|+++|
T Consensus 560 ~~g~~l~~-~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~aA 638 (867)
T TIGR01524 560 LLGADIEE-LSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEAS 638 (867)
T ss_pred eecHhhhh-CCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHhC
Confidence 66665532 23345667788889999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH-hhhhhHHHHHHH
Q 012767 304 DIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQV-LEL-NFLFTLDTVIAI 363 (456)
Q Consensus 304 Divl~~~~l~~i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~-~~~-~~~~pl~~~~~l 363 (456)
|+||++++|+.|+.++++||++|+||++|+.|.+..++..++..+ +.+ ..++|+.++++|
T Consensus 639 DiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil 700 (867)
T TIGR01524 639 DIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLL 700 (867)
T ss_pred CEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 999999999999999999999999999999999876555444332 222 345799999998
No 9
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1.1e-63 Score=563.30 Aligned_cols=371 Identities=27% Similarity=0.422 Sum_probs=296.3
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeec---c-----cCCC--------------------------------
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEI---F-----AGGV-------------------------------- 40 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~---~-----~~~~-------------------------------- 40 (456)
|+++|+||.+++||+|||||||+|+|+|.++++.. + ..++
T Consensus 350 L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (1053)
T TIGR01523 350 LDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEF 429 (1053)
T ss_pred chhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccc
Confidence 67999999999999999999999999999876531 0 0000
Q ss_pred -------C---------hHHHHHHHHHhccc------------CCCChHHHHHHHhhcCch----------h--------
Q 012767 41 -------D---------ADTVVLMAARASQV------------ENLDVIDAAIVGMLADPK----------E-------- 74 (456)
Q Consensus 41 -------~---------~~~il~~aa~~~~~------------~~~~pi~~ai~~~~~~~~----------~-------- 74 (456)
+ ...++..++.|+.. ...||.|.|++.++...+ .
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~ 509 (1053)
T TIGR01523 430 KDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNEND 509 (1053)
T ss_pred cccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhcccc
Confidence 0 01345555655421 124899999998753111 0
Q ss_pred -----------hhhcceEEEeecCCCCCceEEEEEEecCC-cEEEEEcCcHHHHHhhccC------------CchhhhHH
Q 012767 75 -----------ARADIQEVHFLPFDPTGKRTALTYIDSEG-KMHRVTKGSPEQILNLLHN------------KSKIGRKV 130 (456)
Q Consensus 75 -----------~~~~~~~~~~~pf~~~~k~~~v~~~~~~g-~~~~~~KGa~e~Il~~~~~------------~~~~~~~~ 130 (456)
.+..|+.++.+||+|.+|||++++++.++ ++++|+|||||.|+++|.. +++.++.+
T Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i 589 (1053)
T TIGR01523 510 QSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELI 589 (1053)
T ss_pred ccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHH
Confidence 02347789999999999999999886544 4788999999999999962 11235667
Q ss_pred HHHHHHHHHccCeeeEEeeeecCCCC------------cCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEc
Q 012767 131 NAVINKFAERGLRSLAVAYQEVPEGS------------KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMIT 198 (456)
Q Consensus 131 ~~~i~~~~~~Glr~l~vA~~~~~~~~------------~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miT 198 (456)
.+.+++|+++|+|||++||+.++..+ .+..|++|+|+|+++++||||++++++|+.|+++||+|+|+|
T Consensus 590 ~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiT 669 (1053)
T TIGR01523 590 IANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLT 669 (1053)
T ss_pred HHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEEC
Confidence 78899999999999999999886432 234578999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHhCCCCCC--------CCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEE
Q 012767 199 GDQLAIAKETGRRLGMGTNM--------YPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHIC 270 (456)
Q Consensus 199 GD~~~~a~~ia~~lGi~~~~--------~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v 270 (456)
||++.+|.++|+++||.+.. ....+++|.+.+. +...+++++++...+|||++|+||.++|+.+|++|++|
T Consensus 670 GD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~-l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~V 748 (1053)
T TIGR01523 670 GDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDA-LSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFC 748 (1053)
T ss_pred CCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhh-cCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCee
Confidence 99999999999999996431 1234666665542 22334566777788999999999999999999999999
Q ss_pred EEecCCCCchhhhhhcCeeEEec-cccHHHhhcccEEeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012767 271 GMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVL 349 (456)
Q Consensus 271 ~~iGDG~ND~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~ 349 (456)
+|+|||+||+|||++|||||||| +|++.|+++||+++++++|+.|+.++.+||++|+||++++.|.+..++..++..+.
T Consensus 749 am~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~ 828 (1053)
T TIGR01523 749 AMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLII 828 (1053)
T ss_pred EEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 99999999999999999999998 89999999999999999999999999999999999999999999876655554443
Q ss_pred HHhh-------hhhHHHHHHH-HHhcccCcc
Q 012767 350 ELNF-------LFTLDTVIAI-LQTAFTSKK 372 (456)
Q Consensus 350 ~~~~-------~~pl~~~~~l-~~~~~~~~~ 372 (456)
..+. .+|++++++| +++.+...+
T Consensus 829 ~~~~~~~~g~~~~Pl~~~qiL~inli~d~~p 859 (1053)
T TIGR01523 829 GLAFRDENGKSVFPLSPVEILWCIMITSCFP 859 (1053)
T ss_pred HHHHhcccCCCcCchHHHHHHHHHHHHHHHH
Confidence 3222 3799999998 333333333
No 10
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=9.1e-63 Score=554.54 Aligned_cols=360 Identities=25% Similarity=0.369 Sum_probs=293.9
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeeccc---CC----CC--hHHHHHHHHHhccc------------CCCC
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFA---GG----VD--ADTVVLMAARASQV------------ENLD 59 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~---~~----~~--~~~il~~aa~~~~~------------~~~~ 59 (456)
++++|+||++|+||||||||||+|+|+|.+++..... .+ .. ..+++..++.++.. ...|
T Consensus 367 l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~ 446 (941)
T TIGR01517 367 LAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGS 446 (941)
T ss_pred hHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCC
Confidence 5789999999999999999999999999987653210 00 01 12233333333221 1247
Q ss_pred hHHHHHHHhhcC----chhhhhcceEEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCC-----c-----h
Q 012767 60 VIDAAIVGMLAD----PKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK-----S-----K 125 (456)
Q Consensus 60 pi~~ai~~~~~~----~~~~~~~~~~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~-----~-----~ 125 (456)
|+|.|++.++.. ....+..++.++.+||++.+|+|+++++..+++++.++||+||.|+++|..- . +
T Consensus 447 p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~ 526 (941)
T TIGR01517 447 KTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD 526 (941)
T ss_pred ccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH
Confidence 999999988642 2233456777889999999999999988766778899999999999999631 0 1
Q ss_pred hhhHHHHHHHHHHHccCeeeEEeeeecCCCCc---CCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcH
Q 012767 126 IGRKVNAVINKFAERGLRSLAVAYQEVPEGSK---ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQL 202 (456)
Q Consensus 126 ~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~---~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~ 202 (456)
..+.+.+.+++++++|+|++++||+.++.++. +..|++|+|+|+++++|||||+++++|+.|+++||+|+|+|||++
T Consensus 527 ~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~ 606 (941)
T TIGR01517 527 DKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNI 606 (941)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCCh
Confidence 24567788899999999999999998864432 234789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhh
Q 012767 203 AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPA 282 (456)
Q Consensus 203 ~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~a 282 (456)
.+|.++|+++||.++. ..++.|.+.+. +...++++++.+..+|||++|+||.++|+.||++|++|+|+|||+||+||
T Consensus 607 ~tA~~iA~~~GI~~~~--~~vi~G~~~~~-l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapA 683 (941)
T TIGR01517 607 DTAKAIARNCGILTFG--GLAMEGKEFRR-LVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPA 683 (941)
T ss_pred HHHHHHHHHcCCCCCC--ceEeeHHHhhh-CCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHH
Confidence 9999999999997532 34666665543 23345677788889999999999999999999999999999999999999
Q ss_pred hhhcCeeEEec-cccHHHhhcccEEeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-hhhhHHH
Q 012767 283 LKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLE-LN-FLFTLDT 359 (456)
Q Consensus 283 Lk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~-~~-~~~pl~~ 359 (456)
|++|||||||| +|+|+|+++||+||++++|+.|+.++.+||++|+||++++.|.+..+...+.+.+.. ++ ...|+++
T Consensus 684 Lk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~ 763 (941)
T TIGR01517 684 LKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTA 763 (941)
T ss_pred HHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHH
Confidence 99999999999 999999999999999999999999999999999999999999998766665555432 22 4579999
Q ss_pred HHHH
Q 012767 360 VIAI 363 (456)
Q Consensus 360 ~~~l 363 (456)
++++
T Consensus 764 ~qil 767 (941)
T TIGR01517 764 VQLL 767 (941)
T ss_pred HHHH
Confidence 9998
No 11
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=1.5e-61 Score=546.45 Aligned_cols=362 Identities=25% Similarity=0.385 Sum_probs=292.2
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecc--c-CC--------CCh-----HHHHHHHHHhccc---------
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIF--A-GG--------VDA-----DTVVLMAARASQV--------- 55 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~--~-~~--------~~~-----~~il~~aa~~~~~--------- 55 (456)
++++|+||++|+||||||||||+|+|+|.++++... . ++ .+. +.++.+++.|+..
T Consensus 335 ~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~ 414 (997)
T TIGR01106 335 LEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENV 414 (997)
T ss_pred cHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccCCC
Confidence 579999999999999999999999999998875210 0 00 111 2455666666421
Q ss_pred ------CCCChHHHHHHHhhc----CchhhhhcceEEEeecCCCCCceEEEEEEe--c-CCcEEEEEcCcHHHHHhhccC
Q 012767 56 ------ENLDVIDAAIVGMLA----DPKEARADIQEVHFLPFDPTGKRTALTYID--S-EGKMHRVTKGSPEQILNLLHN 122 (456)
Q Consensus 56 ------~~~~pi~~ai~~~~~----~~~~~~~~~~~~~~~pf~~~~k~~~v~~~~--~-~g~~~~~~KGa~e~Il~~~~~ 122 (456)
...||.|.|++.++. +....+..++.++.+||+|.+|+|++++.. . ++++++++|||||.|+++|+.
T Consensus 415 ~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~ 494 (997)
T TIGR01106 415 PILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSS 494 (997)
T ss_pred cccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhH
Confidence 124799999998764 233456678899999999999999887753 2 246788999999999999952
Q ss_pred ----------CchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCc--------C---CCCCCceEeEecccCCCCCcchH
Q 012767 123 ----------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK--------E---SSGSPWQFIGLIPLFDPPIHDSA 181 (456)
Q Consensus 123 ----------~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~--------~---~~e~~~~~lG~i~l~d~~r~~~~ 181 (456)
+++..+.+.+.+++|+++|+||+++||+.++.++. + ..|++|+|+|+++++||||++++
T Consensus 495 ~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~ 574 (997)
T TIGR01106 495 ILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVP 574 (997)
T ss_pred HhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHHH
Confidence 12345668888999999999999999998864321 1 12789999999999999999999
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC----------------------CccccCCchhhhhhcCChH
Q 012767 182 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SSALSGQDRDESIVALPVD 239 (456)
Q Consensus 182 ~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~----------------------~~~l~g~~~~~~~~~~~~~ 239 (456)
++|+.|+++||+|+|+|||+..+|.++|+++|+..+... ..++.|.+.+. +...+++
T Consensus 575 ~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~-l~~~el~ 653 (997)
T TIGR01106 575 DAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD-MTSEQLD 653 (997)
T ss_pred HHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh-CCHHHHH
Confidence 999999999999999999999999999999999643211 13555555432 2223456
Q ss_pred HHHhhcc--cccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEec-cccHHHhhcccEEeeCCCchHHH
Q 012767 240 ELIEKAD--GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVII 316 (456)
Q Consensus 240 ~~~~~~~--v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~ 316 (456)
+++.++. +|||++|+||.++|+.+|+.|++|+|+|||+||+|||++|||||||| +|+++++++||+||++++|+.|+
T Consensus 654 ~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv 733 (997)
T TIGR01106 654 EILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIV 733 (997)
T ss_pred HHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHH
Confidence 6666654 99999999999999999999999999999999999999999999999 79999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhhHHHHHHH
Q 012767 317 TAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELN--FLFTLDTVIAI 363 (456)
Q Consensus 317 ~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~--~~~pl~~~~~l 363 (456)
.++.+||++|.|+++++.|.+..++..++..+...+ .+.|++++++|
T Consensus 734 ~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL 782 (997)
T TIGR01106 734 TGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITIL 782 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHH
Confidence 999999999999999999999876666555543333 45689999998
No 12
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=5.9e-60 Score=530.10 Aligned_cols=370 Identities=28% Similarity=0.391 Sum_probs=293.3
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecc-----------cCCCC-------------------hHHHHHHHH
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIF-----------AGGVD-------------------ADTVVLMAA 50 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~-----------~~~~~-------------------~~~il~~aa 50 (456)
++++|+||++|+||||||||||+|+|+|.+++.... ..+++ .+.++..++
T Consensus 280 ~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 359 (917)
T TIGR01116 280 LPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAA 359 (917)
T ss_pred cHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHH
Confidence 578999999999999999999999999998764210 00010 123445555
Q ss_pred HhcccC------------CCChHHHHHHHhhcCch--------------------hhhhcceEEEeecCCCCCceEEEEE
Q 012767 51 RASQVE------------NLDVIDAAIVGMLADPK--------------------EARADIQEVHFLPFDPTGKRTALTY 98 (456)
Q Consensus 51 ~~~~~~------------~~~pi~~ai~~~~~~~~--------------------~~~~~~~~~~~~pf~~~~k~~~v~~ 98 (456)
.|+... ..||.|.|++.++.+.+ ..+..|+.++.+||+|.+|||++++
T Consensus 360 lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv 439 (917)
T TIGR01116 360 LCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLC 439 (917)
T ss_pred hcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEE
Confidence 555321 24899999998753211 1235577899999999999999988
Q ss_pred EecCCcEEEEEcCcHHHHHhhccC-----------CchhhhHHHHHHHHHHH-ccCeeeEEeeeecCCCC----------
Q 012767 99 IDSEGKMHRVTKGSPEQILNLLHN-----------KSKIGRKVNAVINKFAE-RGLRSLAVAYQEVPEGS---------- 156 (456)
Q Consensus 99 ~~~~g~~~~~~KGa~e~Il~~~~~-----------~~~~~~~~~~~i~~~~~-~Glr~l~vA~~~~~~~~---------- 156 (456)
++ +++++.|+|||||.|++.|+. +++..+.+.+.+++|++ +|+||+++||+.++.+.
T Consensus 440 ~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~ 518 (917)
T TIGR01116 440 KP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPAN 518 (917)
T ss_pred ee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchh
Confidence 75 467889999999999999962 12234567888999999 99999999999986421
Q ss_pred cCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC--CccccCCchhhhhh
Q 012767 157 KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SSALSGQDRDESIV 234 (456)
Q Consensus 157 ~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~--~~~l~g~~~~~~~~ 234 (456)
.+..|++++|+|+++++||||++++++|+.|+++|++++|+|||+..+|.++|+++|+..+..+ ...+.|.+.+. +.
T Consensus 519 ~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~-~~ 597 (917)
T TIGR01116 519 FEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDE-MG 597 (917)
T ss_pred hhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhh-CC
Confidence 1345889999999999999999999999999999999999999999999999999999753221 12445544322 22
Q ss_pred cCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchH
Q 012767 235 ALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV 314 (456)
Q Consensus 235 ~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~ 314 (456)
..+..+.+.+..+|||++|+||.++|+.+|+.|+.|+|+|||+||+|||++|||||+|++|++.++++||+++.+++|+.
T Consensus 598 ~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~ 677 (917)
T TIGR01116 598 PAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFAT 677 (917)
T ss_pred HHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHH
Confidence 22344556667899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-hhhhHHHHHHH-HHhcccCcc
Q 012767 315 IITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLE-LN-FLFTLDTVIAI-LQTAFTSKK 372 (456)
Q Consensus 315 i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~-~~-~~~pl~~~~~l-~~~~~~~~~ 372 (456)
|+.++.+||++|+|+++++.|.+..++..++..+.. ++ ...|+++++++ .+..+...+
T Consensus 678 i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qll~inli~d~lp 738 (917)
T TIGR01116 678 IVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLP 738 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998655554444333 23 34799999987 333334333
No 13
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=5.5e-59 Score=520.99 Aligned_cols=352 Identities=29% Similarity=0.436 Sum_probs=289.0
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeeccc----C--CC-------------------ChHHHHHHHHHhccc
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFA----G--GV-------------------DADTVVLMAARASQV 55 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~----~--~~-------------------~~~~il~~aa~~~~~ 55 (456)
++++|+||++|+||||||||||+|+|+|.+++..... . ++ ...+++..++.++..
T Consensus 315 ~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 394 (884)
T TIGR01522 315 LPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNA 394 (884)
T ss_pred hHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCC
Confidence 4689999999999999999999999999987642100 0 00 013455555555432
Q ss_pred C--------CCChHHHHHHHhhcCc--hhhhhcceEEEeecCCCCCceEEEEEEec-CCcEEEEEcCcHHHHHhhccC--
Q 012767 56 E--------NLDVIDAAIVGMLADP--KEARADIQEVHFLPFDPTGKRTALTYIDS-EGKMHRVTKGSPEQILNLLHN-- 122 (456)
Q Consensus 56 ~--------~~~pi~~ai~~~~~~~--~~~~~~~~~~~~~pf~~~~k~~~v~~~~~-~g~~~~~~KGa~e~Il~~~~~-- 122 (456)
. ..||+|.|++.++... ...+..++.++.+||++.+|+|+++++.. +++.+.++||+||.|+..|..
T Consensus 395 ~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~ 474 (884)
T TIGR01522 395 KFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQ 474 (884)
T ss_pred eecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhh
Confidence 1 1369999999886532 22345688899999999999999988753 567889999999999999962
Q ss_pred ---------CchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCe
Q 012767 123 ---------KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLG 193 (456)
Q Consensus 123 ---------~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~ 193 (456)
+++.++.+.+.+++++++|+|++++||+++ +++|+|+|+++++|||||+++++|+.|+++|++
T Consensus 475 ~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~ 546 (884)
T TIGR01522 475 KKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVR 546 (884)
T ss_pred hcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCe
Confidence 122345677788899999999999999874 357899999999999999999999999999999
Q ss_pred EEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEe
Q 012767 194 VKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMI 273 (456)
Q Consensus 194 v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~i 273 (456)
++|+|||+..+|.++|+++||.... ...+.|.+.+. +...++++++.+..+|||++|+||..+|+.+|+.|+.|+|+
T Consensus 547 v~miTGD~~~tA~~ia~~~Gi~~~~--~~~v~g~~l~~-~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mv 623 (884)
T TIGR01522 547 IIMITGDSQETAVSIARRLGMPSKT--SQSVSGEKLDA-MDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMT 623 (884)
T ss_pred EEEECCCCHHHHHHHHHHcCCCCCC--CceeEhHHhHh-CCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEE
Confidence 9999999999999999999997532 33456655432 33345667788889999999999999999999999999999
Q ss_pred cCCCCchhhhhhcCeeEEec-cccHHHhhcccEEeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Q 012767 274 GNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQV-LEL 351 (456)
Q Consensus 274 GDG~ND~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~-~~~ 351 (456)
|||+||+|||++|||||+|| +++++++++||+++++++|+.|+.++++||++|+||++++.|.+..+...+.+.+ +.+
T Consensus 624 GDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~ 703 (884)
T TIGR01522 624 GDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATL 703 (884)
T ss_pred CCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 99999999999999999998 7999999999999999999999999999999999999999999986655554432 233
Q ss_pred h-hhhhHHHHHHH
Q 012767 352 N-FLFTLDTVIAI 363 (456)
Q Consensus 352 ~-~~~pl~~~~~l 363 (456)
+ ...|++++++|
T Consensus 704 ~~~~~pl~~~qiL 716 (884)
T TIGR01522 704 MGFPNPLNAMQIL 716 (884)
T ss_pred HcCCCchhHHHHH
Confidence 3 45799999998
No 14
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=1.6e-59 Score=533.00 Aligned_cols=360 Identities=22% Similarity=0.240 Sum_probs=281.4
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCC----------CChHHHHHHHHHhcc------cCCCChHHHH
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGG----------VDADTVVLMAARASQ------VENLDVIDAA 64 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~----------~~~~~il~~aa~~~~------~~~~~pi~~a 64 (456)
+.++|++|++|++|||||||||+|+|+|.+++....... .....+....+.|.. ....||+|.|
T Consensus 439 ~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~a 518 (1054)
T TIGR01657 439 PFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKK 518 (1054)
T ss_pred cccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHH
Confidence 468999999999999999999999999998654211000 011222333333332 1236899999
Q ss_pred HHHhhcCchhh-------------------hhcceEEEeecCCCCCceEEEEEEecC-CcEEEEEcCcHHHHHhhccCCc
Q 012767 65 IVGMLADPKEA-------------------RADIQEVHFLPFDPTGKRTALTYIDSE-GKMHRVTKGSPEQILNLLHNKS 124 (456)
Q Consensus 65 i~~~~~~~~~~-------------------~~~~~~~~~~pf~~~~k~~~v~~~~~~-g~~~~~~KGa~e~Il~~~~~~~ 124 (456)
++.+.+..... ...+++++.+||+|.+|||+++++..+ ++.+.++|||||.|+++|.. +
T Consensus 519 l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~-~ 597 (1054)
T TIGR01657 519 MFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP-E 597 (1054)
T ss_pred HHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC-c
Confidence 99876421100 145788999999999999999988643 56789999999999999974 3
Q ss_pred hhhhHHHHHHHHHHHccCeeeEEeeeecCCC--------CcCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEE
Q 012767 125 KIGRKVNAVINKFAERGLRSLAVAYQEVPEG--------SKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKM 196 (456)
Q Consensus 125 ~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~--------~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~m 196 (456)
..++.+.+.+++|+++|+||+++||+.+++. +++..|++++|+|+++|+||+||+++++|+.|+++||+|+|
T Consensus 598 ~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~m 677 (1054)
T TIGR01657 598 TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVM 677 (1054)
T ss_pred CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEE
Confidence 4677888999999999999999999998742 23456899999999999999999999999999999999999
Q ss_pred EcCCcHHHHHHHHHHhCCCCCCCC---------------------------------------------------Ccccc
Q 012767 197 ITGDQLAIAKETGRRLGMGTNMYP---------------------------------------------------SSALS 225 (456)
Q Consensus 197 iTGD~~~~a~~ia~~lGi~~~~~~---------------------------------------------------~~~l~ 225 (456)
+|||++.||.++|+++||.++... ..+++
T Consensus 678 iTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~it 757 (1054)
T TIGR01657 678 ITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMS 757 (1054)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEE
Confidence 999999999999999999643210 01222
Q ss_pred CCchhhh--hhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcc
Q 012767 226 GQDRDES--IVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAA 303 (456)
Q Consensus 226 g~~~~~~--~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aa 303 (456)
|+..+.. .....+.+++.++.+|||++|+||.++|+.||+.|+.|+|||||+||+||||+|||||||+++ + |..||
T Consensus 758 G~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-d-as~AA 835 (1054)
T TIGR01657 758 GKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-E-ASVAA 835 (1054)
T ss_pred cHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-c-ceeec
Confidence 2222111 111235567788899999999999999999999999999999999999999999999999865 3 45899
Q ss_pred cEEeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Q 012767 304 DIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLDTVIAI 363 (456)
Q Consensus 304 Divl~~~~l~~i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~~~~pl~~~~~l 363 (456)
|+++.+++|+.|+.+|++||+++.++++.+.|.+.+....++......+...|+..++++
T Consensus 836 ~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~Q~l 895 (1054)
T TIGR01657 836 PFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILYLIGSNLGDGQFL 895 (1054)
T ss_pred ccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcCccHHHH
Confidence 999999999999999999999999999888887765444433332222344677888866
No 15
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=4.6e-57 Score=484.69 Aligned_cols=286 Identities=23% Similarity=0.356 Sum_probs=245.2
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcce
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQ 80 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~ 80 (456)
++++|+||.+|+||||||||||+|++.+.++. . ..+.+.++++.+++.++..++ ||+++||+.++...+... ...
T Consensus 289 ~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~-~--~~~~~~~~ll~~a~~~~~~s~-~P~~~AIv~~a~~~~~~~-~~~ 363 (673)
T PRK14010 289 GRSVETCGDVNVLILDKTGTITYGNRMADAFI-P--VKSSSFERLVKAAYESSIADD-TPEGRSIVKLAYKQHIDL-PQE 363 (673)
T ss_pred cHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEE-e--CCCccHHHHHHHHHHhcCCCC-ChHHHHHHHHHHHcCCCc-hhh
Confidence 47899999999999999999999888876642 1 234566778888888776655 599999998765321110 011
Q ss_pred EEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCC-chhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCC
Q 012767 81 EVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK-SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKES 159 (456)
Q Consensus 81 ~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~-~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~ 159 (456)
..+++||++.+|++++.+ +|+ .+.||+++.++++|... ...+..+.+.+++++++|+|+++++.+
T Consensus 364 ~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~~~--------- 429 (673)
T PRK14010 364 VGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLED--------- 429 (673)
T ss_pred hcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEEEC---------
Confidence 245689999999998764 343 56699999999999642 223345667778899999999998753
Q ss_pred CCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChH
Q 012767 160 SGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 239 (456)
Q Consensus 160 ~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 239 (456)
++++|++++.||+|||++++|++|+++||+++|+|||++.+|.++|+++||.
T Consensus 430 ----~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~------------------------ 481 (673)
T PRK14010 430 ----NEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD------------------------ 481 (673)
T ss_pred ----CEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc------------------------
Confidence 4999999999999999999999999999999999999999999999999995
Q ss_pred HHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHH
Q 012767 240 ELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 240 ~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i 319 (456)
++|++++|+||.++|+.+|++|+.|+|+|||+||+|||++|||||||++|+|+|+++||+|+++++|+.|+.++
T Consensus 482 ------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~ls~Iv~av 555 (673)
T PRK14010 482 ------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVV 555 (673)
T ss_pred ------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCCCCHHHHHhCCEEEcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 012767 320 LISRAIFQRMRNYMVRGIDG 339 (456)
Q Consensus 320 ~~~R~i~~~i~~~~~y~~~~ 339 (456)
++||++|.|+++++.|.+..
T Consensus 556 ~~gR~i~~n~~~~~~f~~~~ 575 (673)
T PRK14010 556 LIGKQLLMTRGSLTTFSIAN 575 (673)
T ss_pred HHHHHHHHHHHHHHheeeec
Confidence 99999999999999998854
No 16
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=6.9e-57 Score=512.52 Aligned_cols=340 Identities=21% Similarity=0.299 Sum_probs=270.2
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecc--cCCC-------------------------------C------
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIF--AGGV-------------------------------D------ 41 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~--~~~~-------------------------------~------ 41 (456)
++++|+||.+++||+|||||||+|+|++.++++... ..+. +
T Consensus 350 ~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (1057)
T TIGR01652 350 SNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDL 429 (1057)
T ss_pred CCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHh
Confidence 357899999999999999999999999999876311 0000 0
Q ss_pred ----------hHHHHHHHHHhccc-------C-------CCChHHHHHHHhhcCch------------------hhhhcc
Q 012767 42 ----------ADTVVLMAARASQV-------E-------NLDVIDAAIVGMLADPK------------------EARADI 79 (456)
Q Consensus 42 ----------~~~il~~aa~~~~~-------~-------~~~pi~~ai~~~~~~~~------------------~~~~~~ 79 (456)
..+++..++.|... . ..+|.|.|++.++...+ .....|
T Consensus 430 ~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~ 509 (1057)
T TIGR01652 430 LKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEY 509 (1057)
T ss_pred hhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEE
Confidence 02334444444321 1 24799999998754321 012457
Q ss_pred eEEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccC-CchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCc-
Q 012767 80 QEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHN-KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK- 157 (456)
Q Consensus 80 ~~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~-~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~- 157 (456)
+.++.+||++.+|||++++++.+|++++++||||+.|+++|.. +++..+.+.+++++|+.+|+||+++|++.++++++
T Consensus 510 ~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~ 589 (1057)
T TIGR01652 510 EILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYE 589 (1057)
T ss_pred EEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHH
Confidence 8899999999999999999988888899999999999999974 34456778899999999999999999999875421
Q ss_pred ------------------------CCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhC
Q 012767 158 ------------------------ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG 213 (456)
Q Consensus 158 ------------------------~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lG 213 (456)
+..|++++|+|+++++||||++++++|+.|+++||+|||+|||+.+||.++|++||
T Consensus 590 ~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ 669 (1057)
T TIGR01652 590 EWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCR 669 (1057)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhC
Confidence 34589999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCC---------------------------------------ccccCCchhhhhhc---CChHHHHhhcc--ccc
Q 012767 214 MGTNMYPS---------------------------------------SALSGQDRDESIVA---LPVDELIEKAD--GFA 249 (456)
Q Consensus 214 i~~~~~~~---------------------------------------~~l~g~~~~~~~~~---~~~~~~~~~~~--v~a 249 (456)
|.++.... .++.|...+..... ..+.+++..+. +||
T Consensus 670 ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~a 749 (1057)
T TIGR01652 670 LLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICC 749 (1057)
T ss_pred CCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEe
Confidence 97643211 13344333222211 12334555555 999
Q ss_pred ccCchhHHHHHHHHhhc-CCEEEEecCCCCchhhhhhcCeeEEecc-ccHHHhhcccEEeeCCCchHHHHHH-HHHHHHH
Q 012767 250 GVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIAVAD-ATDAARSAADIVLTEPGLNVIITAV-LISRAIF 326 (456)
Q Consensus 250 ~~~P~~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~AdvGIa~~~-~~~~a~~aaDivl~~~~l~~i~~~i-~~~R~i~ 326 (456)
|++|+||.++|+.+|+. |++|+|+|||+||+|||++|||||++.+ ...+|+.+||+++.+ |..+..++ .+||++|
T Consensus 750 R~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~ 827 (1057)
T TIGR01652 750 RVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSY 827 (1057)
T ss_pred CCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHH
Confidence 99999999999999998 9999999999999999999999999853 333788999999975 99999988 7899999
Q ss_pred HHHHHHHHHHHHHHHH
Q 012767 327 QRMRNYMVRGIDGLSS 342 (456)
Q Consensus 327 ~~i~~~~~y~~~~~~~ 342 (456)
+|+++++.|.+.-++.
T Consensus 828 ~r~~~~i~~~~~kn~~ 843 (1057)
T TIGR01652 828 KRISKMILYFFYKNLI 843 (1057)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999998865443
No 17
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.5e-55 Score=473.35 Aligned_cols=285 Identities=26% Similarity=0.376 Sum_probs=244.7
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCc-h--hhhh
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADP-K--EARA 77 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~-~--~~~~ 77 (456)
+.++|+||++|+||||||||||+|+|.+.+++. ..+.+.++++.+++.++..++| |+++||+.++... + ..+.
T Consensus 289 ~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~a~~~s~~s~h-P~~~AIv~~a~~~~~~~~~~~ 364 (679)
T PRK01122 289 GRAVEAAGDVDTLLLDKTGTITLGNRQASEFLP---VPGVTEEELADAAQLSSLADET-PEGRSIVVLAKQRFNLRERDL 364 (679)
T ss_pred chHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEe---CCCCCHHHHHHHHHHhcCCCCC-chHHHHHHHHHhhcCCCchhh
Confidence 478999999999999999999999999988642 2456778888888888887765 9999999876531 1 1112
Q ss_pred cceEEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCC-chhhhHHHHHHHHHHHccCeeeEEeeeecCCCC
Q 012767 78 DIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK-SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGS 156 (456)
Q Consensus 78 ~~~~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~-~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~ 156 (456)
.++..+++||++.++++++.+ +| ..+.||+++.++++|... ...++.+.+.+++++++|.|++++|++.
T Consensus 365 ~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va~~~----- 434 (679)
T PRK01122 365 QSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVAEDN----- 434 (679)
T ss_pred ccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEEECC-----
Confidence 245678899999988887643 34 578899999999999642 2345677888899999999999999753
Q ss_pred cCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcC
Q 012767 157 KESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVAL 236 (456)
Q Consensus 157 ~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~ 236 (456)
+++|+++++||+|||++++|++|+++||+++|+|||++.+|.++|+++||+
T Consensus 435 --------~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId--------------------- 485 (679)
T PRK01122 435 --------RVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD--------------------- 485 (679)
T ss_pred --------eEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc---------------------
Confidence 999999999999999999999999999999999999999999999999995
Q ss_pred ChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHH
Q 012767 237 PVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVII 316 (456)
Q Consensus 237 ~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~ 316 (456)
++||+++|+||.++|+.+|++|+.|+|+|||+||+|||++|||||||++|+++|+++||+|++++||+.|+
T Consensus 486 ---------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~~s~Iv 556 (679)
T PRK01122 486 ---------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMVDLDSNPTKLI 556 (679)
T ss_pred ---------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 012767 317 TAVLISRAIFQRMRNYMVRGI 337 (456)
Q Consensus 317 ~~i~~~R~i~~~i~~~~~y~~ 337 (456)
.++++||++.-.--....|++
T Consensus 557 ~av~~GR~~~~tr~~~~~f~~ 577 (679)
T PRK01122 557 EVVEIGKQLLMTRGALTTFSI 577 (679)
T ss_pred HHHHHHHHHHhhhHhhhhhhH
Confidence 999999996633333334443
No 18
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=1.8e-54 Score=490.42 Aligned_cols=334 Identities=21% Similarity=0.270 Sum_probs=264.6
Q ss_pred hHHHHhccccEEEcCcccccccCceEEEEEeeecccCC-----------------------------C------------
Q 012767 2 SAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGG-----------------------------V------------ 40 (456)
Q Consensus 2 ~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~-----------------------------~------------ 40 (456)
+..|+||+|++||+|||||||+|+|++.+|++.....+ .
T Consensus 445 nl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (1178)
T PLN03190 445 NINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGK 524 (1178)
T ss_pred cchhhhccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccc
Confidence 56899999999999999999999999999987311000 0
Q ss_pred C-h-----HHHHHHHHHhccc------------------CCCChHHHHHHHhhcCch----------------hhhhcce
Q 012767 41 D-A-----DTVVLMAARASQV------------------ENLDVIDAAIVGMLADPK----------------EARADIQ 80 (456)
Q Consensus 41 ~-~-----~~il~~aa~~~~~------------------~~~~pi~~ai~~~~~~~~----------------~~~~~~~ 80 (456)
+ . .+++...+.|... ...+|.|.||+.++...+ ..+..|+
T Consensus 525 ~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~ 604 (1178)
T PLN03190 525 DTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFN 604 (1178)
T ss_pred cchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecce
Confidence 0 0 1234444444321 112699999998764322 2356789
Q ss_pred EEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCC--chhhhHHHHHHHHHHHccCeeeEEeeeecCCCCc-
Q 012767 81 EVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK--SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK- 157 (456)
Q Consensus 81 ~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~--~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~- 157 (456)
+++.+||+|.+|||++++++.+|+.++++||||+.|+++|... .+..+.+.+++++|+++|+|||++||+.++++++
T Consensus 605 il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~ 684 (1178)
T PLN03190 605 VLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFE 684 (1178)
T ss_pred eEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHh
Confidence 9999999999999999999878888999999999999999642 3456778899999999999999999999975422
Q ss_pred ------------------------CCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhC
Q 012767 158 ------------------------ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG 213 (456)
Q Consensus 158 ------------------------~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lG 213 (456)
+.+|++++++|+++++||||++++++|+.|+++||+|||+|||+.++|.+||+.||
T Consensus 685 ~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~ 764 (1178)
T PLN03190 685 QWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSK 764 (1178)
T ss_pred hHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhC
Confidence 24589999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcc-----------------------------------------------ccCCchhhhhh---cCChHHHHh
Q 012767 214 MGTNMYPSSA-----------------------------------------------LSGQDRDESIV---ALPVDELIE 243 (456)
Q Consensus 214 i~~~~~~~~~-----------------------------------------------l~g~~~~~~~~---~~~~~~~~~ 243 (456)
|.++...... +.|...+.... ...+.+++.
T Consensus 765 Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~ 844 (1178)
T PLN03190 765 LLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLAS 844 (1178)
T ss_pred CCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHH
Confidence 9765322111 12221111111 012345555
Q ss_pred hcc--cccccCchhHHHHHHHHhhc-CCEEEEecCCCCchhhhhhcCeeEEec-cccHHHhhcccEEeeCCCchHHHHHH
Q 012767 244 KAD--GFAGVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 244 ~~~--v~a~~~P~~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i 319 (456)
++. +|||++|.||.++|+.+|+. +++|+|||||+||++||++|||||++. ....+|..+||+.+.+ |..+..++
T Consensus 845 ~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~--Fr~L~rLL 922 (1178)
T PLN03190 845 KCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQ--FRFLVPLL 922 (1178)
T ss_pred hCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhh--hHHHHHHH
Confidence 555 79999999999999999997 589999999999999999999999875 3445888999999965 87888887
Q ss_pred H-HHHHHHHHHHHHHHHHH
Q 012767 320 L-ISRAIFQRMRNYMVRGI 337 (456)
Q Consensus 320 ~-~~R~i~~~i~~~~~y~~ 337 (456)
. +||+.|.|+.+.+.|.+
T Consensus 923 lvHGr~~y~R~s~~i~y~f 941 (1178)
T PLN03190 923 LVHGHWNYQRMGYMILYNF 941 (1178)
T ss_pred HHhCHHHHHHHHHHHHHHH
Confidence 7 99999999998887766
No 19
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-55 Score=460.48 Aligned_cols=362 Identities=26% Similarity=0.394 Sum_probs=296.2
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCC----------------CChHHHHHHHHHhcc----------
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGG----------------VDADTVVLMAARASQ---------- 54 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~----------------~~~~~il~~aa~~~~---------- 54 (456)
|.|+|+||..++||+|||||||+|+|+|...|.+..... ..-..+++.+..|++
T Consensus 357 LeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dv 436 (1019)
T KOG0203|consen 357 LEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDV 436 (1019)
T ss_pred eeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceecccccCC
Confidence 578999999999999999999999999998775321111 111245666666653
Q ss_pred -----cCCCChHHHHHHHhh----cCchhhhhcceEEEeecCCCCCceEEEEEEecC---CcEEEEEcCcHHHHHhhcc-
Q 012767 55 -----VENLDVIDAAIVGML----ADPKEARADIQEVHFLPFDPTGKRTALTYIDSE---GKMHRVTKGSPEQILNLLH- 121 (456)
Q Consensus 55 -----~~~~~pi~~ai~~~~----~~~~~~~~~~~~~~~~pf~~~~k~~~v~~~~~~---g~~~~~~KGa~e~Il~~~~- 121 (456)
..+.|+.+.||+.+. .+..+.|..++.+..+||||++|..-.+....+ .+..++.||+||.++++|+
T Consensus 437 Pv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CST 516 (1019)
T KOG0203|consen 437 PVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCST 516 (1019)
T ss_pred ceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccc
Confidence 234578899998764 344567888889999999999999876666433 5778899999999999996
Q ss_pred ---------CCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCC-----------cCCCCCCceEeEecccCCCCCcchH
Q 012767 122 ---------NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGS-----------KESSGSPWQFIGLIPLFDPPIHDSA 181 (456)
Q Consensus 122 ---------~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~-----------~~~~e~~~~~lG~i~l~d~~r~~~~ 181 (456)
.++...+.++....++...|-||++++++.+|+.. ...+-.+|.|+|++++-||||..++
T Consensus 517 i~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP 596 (1019)
T KOG0203|consen 517 ILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVP 596 (1019)
T ss_pred eeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCc
Confidence 23445677888899999999999999999888543 2234578999999999999999999
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC------------C----------CccccCCchhhhhhcCChH
Q 012767 182 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY------------P----------SSALSGQDRDESIVALPVD 239 (456)
Q Consensus 182 ~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~------------~----------~~~l~g~~~~~~~~~~~~~ 239 (456)
+++..|+.+||+|+|+|||++.||+++|+.+||..+.. + ..++.|.+.. .+....++
T Consensus 597 ~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~-~~~~~qld 675 (1019)
T KOG0203|consen 597 DAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELP-DMSSEQLD 675 (1019)
T ss_pred hhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEeccccc-ccCHHHHH
Confidence 99999999999999999999999999999999764211 0 1233444332 23445577
Q ss_pred HHHhhcc--cccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEec-cccHHHhhcccEEeeCCCchHHH
Q 012767 240 ELIEKAD--GFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVII 316 (456)
Q Consensus 240 ~~~~~~~--v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~ 316 (456)
+++..+. +|||.+|+||+.||+.+|++|.+|+.+|||+||+||||+|||||||| .|+|+++.|||+||+++||++|+
T Consensus 676 ~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIV 755 (1019)
T KOG0203|consen 676 ELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIV 755 (1019)
T ss_pred HHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhhe
Confidence 8877665 89999999999999999999999999999999999999999999999 89999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhhHHHHHHH
Q 012767 317 TAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELN--FLFTLDTVIAI 363 (456)
Q Consensus 317 ~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~--~~~pl~~~~~l 363 (456)
.-+++||-+|+|+||.+.|.+..++.-+..++..++ ..+|+..+.+|
T Consensus 756 tGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL 804 (1019)
T KOG0203|consen 756 TGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTIL 804 (1019)
T ss_pred eecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhh
Confidence 999999999999999999999987766655554444 45677778877
No 20
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=1.4e-52 Score=449.62 Aligned_cols=287 Identities=26% Similarity=0.345 Sum_probs=249.2
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhh--hhc
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEA--RAD 78 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~--~~~ 78 (456)
+.++|+||++|+||||||||||+|+|+|.+++. ..+.+.++++.+++.++..++| |+++||+.++...+.. ...
T Consensus 290 ~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~aa~~~~~s~h-P~a~Aiv~~a~~~~~~~~~~~ 365 (675)
T TIGR01497 290 GRAVEACGDVDTLLLDKTGTITLGNRLASEFIP---AQGVDEKTLADAAQLASLADDT-PEGKSIVILAKQLGIREDDVQ 365 (675)
T ss_pred cHHHHHhhCCCEEEECCCCcccCCCeEEEEEEe---cCCCcHHHHHHHHHHhcCCCCC-cHHHHHHHHHHHcCCCccccc
Confidence 468999999999999999999999999988642 2456778899999888887665 9999999876532211 112
Q ss_pred ceEEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCC-chhhhHHHHHHHHHHHccCeeeEEeeeecCCCCc
Q 012767 79 IQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNK-SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK 157 (456)
Q Consensus 79 ~~~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~-~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~ 157 (456)
++..++.||++.++++++.+. +| ..+.||+++.+++.|... ...+..+.+.+++++++|+|++++|++.
T Consensus 366 ~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va~~~------ 435 (675)
T TIGR01497 366 SLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCEDN------ 435 (675)
T ss_pred cccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEEECC------
Confidence 345678999999877765443 44 568899999999888532 2345667888899999999999999864
Q ss_pred CCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCC
Q 012767 158 ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALP 237 (456)
Q Consensus 158 ~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~ 237 (456)
+++|++++.||+||+++++|++|+++|++++|+|||+..+|.++|+++||.
T Consensus 436 -------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~---------------------- 486 (675)
T TIGR01497 436 -------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD---------------------- 486 (675)
T ss_pred -------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----------------------
Confidence 999999999999999999999999999999999999999999999999995
Q ss_pred hHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHH
Q 012767 238 VDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIIT 317 (456)
Q Consensus 238 ~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~ 317 (456)
+++++++|++|.++|+.+|++|+.|+|+|||.||+|||++|||||||+++++.++++||+++++++|+.|+.
T Consensus 487 --------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~~gt~~akeaadivLldd~~s~Iv~ 558 (675)
T TIGR01497 487 --------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSDPTKLIE 558 (675)
T ss_pred --------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEECCCCHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 012767 318 AVLISRAIFQRMRNYMVRGID 338 (456)
Q Consensus 318 ~i~~~R~i~~~i~~~~~y~~~ 338 (456)
++++||+++-+......|+++
T Consensus 559 av~~GR~~~~t~~~~~t~~~~ 579 (675)
T TIGR01497 559 VVHIGKQLLITRGALTTFSIA 579 (675)
T ss_pred HHHHHHHHHHHHHHHheeeec
Confidence 999999999888777777664
No 21
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-52 Score=449.63 Aligned_cols=314 Identities=30% Similarity=0.368 Sum_probs=262.0
Q ss_pred hHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcceE
Q 012767 2 SAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQE 81 (456)
Q Consensus 2 ~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~ 81 (456)
+++|+++++|+++||||||||+|+|.|.++. .. .+ ++++++.+|+..+..++| |+++||+.++.+.. ....+.
T Consensus 397 ~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~--~~-~~-~e~~~L~laAalE~~S~H-PiA~AIv~~a~~~~--~~~~~~ 469 (713)
T COG2217 397 EALERLAKVDTVVFDKTGTLTEGKPEVTDVV--AL-DG-DEDELLALAAALEQHSEH-PLAKAIVKAAAERG--LPDVED 469 (713)
T ss_pred HHHHhhccCCEEEEeCCCCCcCCceEEEEEe--cC-CC-CHHHHHHHHHHHHhcCCC-hHHHHHHHHHHhcC--CCCccc
Confidence 4799999999999999999999999999854 22 23 889999999999999887 99999998765432 111122
Q ss_pred EEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCC
Q 012767 82 VHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSG 161 (456)
Q Consensus 82 ~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e 161 (456)
++.+|.. ...+ ..+| ..+..|++..+.+.-. +... .....+.+.++|.+++.++.++
T Consensus 470 ~~~i~G~---Gv~~----~v~g--~~v~vG~~~~~~~~~~---~~~~-~~~~~~~~~~~G~t~v~va~dg---------- 526 (713)
T COG2217 470 FEEIPGR---GVEA----EVDG--ERVLVGNARLLGEEGI---DLPL-LSERIEALESEGKTVVFVAVDG---------- 526 (713)
T ss_pred eeeeccC---cEEE----EECC--EEEEEcCHHHHhhcCC---Cccc-hhhhHHHHHhcCCeEEEEEECC----------
Confidence 3333321 1111 1255 4566799998865321 1222 5566788999999999999976
Q ss_pred CCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHH
Q 012767 162 SPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDEL 241 (456)
Q Consensus 162 ~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~ 241 (456)
+++|++++.|++||+++++|+.|++.|++++|+|||+..+|.++|+++||+
T Consensus 527 ---~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId-------------------------- 577 (713)
T COG2217 527 ---KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID-------------------------- 577 (713)
T ss_pred ---EEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH--------------------------
Confidence 999999999999999999999999999999999999999999999999995
Q ss_pred HhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHH
Q 012767 242 IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 321 (456)
Q Consensus 242 ~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~ 321 (456)
++++++.|++|.++|+.||++|++|+|||||+||+|||++||||||||.|+|+|+++||++|+.+++..++.+|..
T Consensus 578 ----~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~l 653 (713)
T COG2217 578 ----EVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDL 653 (713)
T ss_pred ----hheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcccCccccchHHHHHHH
Q 012767 322 SRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLDTVIAILQTAFTSKKDFGKEERELLW 383 (456)
Q Consensus 322 ~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~~~ 383 (456)
||+++++||+|++|++.++...+.+.++.+ +++..-.+.|.+++..+..+++|...|
T Consensus 654 sr~t~~~IkqNl~~A~~yn~~~iplA~~g~-----l~p~~A~~am~~SSv~VvlNaLRL~~~ 710 (713)
T COG2217 654 SRATRRIIKQNLFWAFGYNAIAIPLAAGGL-----LTPWIAALAMSGSSVLVVLNALRLLRS 710 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----cCHHHHHHHHcccHHHHHHHHHHhhcc
Confidence 999999999999999988777776665441 123333378889999998888888765
No 22
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-50 Score=429.66 Aligned_cols=341 Identities=25% Similarity=0.264 Sum_probs=279.8
Q ss_pred hHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcceE
Q 012767 2 SAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQE 81 (456)
Q Consensus 2 ~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~ 81 (456)
+++|.+.++++++||||||||+|++.|.++.+ .....+..+++.+++..+..+.| |+.+||+.|+.+..........
T Consensus 574 e~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~--~~~~~~~~e~l~~v~a~Es~SeH-Pig~AIv~yak~~~~~~~~~~~ 650 (951)
T KOG0207|consen 574 EALEKAHKVKTVVFDKTGTLTEGKPTVVDFKS--LSNPISLKEALALVAAMESGSEH-PIGKAIVDYAKEKLVEPNPEGV 650 (951)
T ss_pred HHHHHHhcCCEEEEcCCCceecceEEEEEEEe--cCCcccHHHHHHHHHHHhcCCcC-chHHHHHHHHHhcccccCcccc
Confidence 57999999999999999999999999998653 33337788999999988888776 9999999998754421111112
Q ss_pred EEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCC
Q 012767 82 VHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSG 161 (456)
Q Consensus 82 ~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e 161 (456)
+.+-.|....+...+. .+|+. ++.|+.+++...- ....+.++..+++-...|.++.++++++
T Consensus 651 ~~~~~~pg~g~~~~~~---~~~~~--i~iGN~~~~~r~~---~~~~~~i~~~~~~~e~~g~tvv~v~vn~---------- 712 (951)
T KOG0207|consen 651 LSFEYFPGEGIYVTVT---VDGNE--VLIGNKEWMSRNG---CSIPDDILDALTESERKGQTVVYVAVNG---------- 712 (951)
T ss_pred ceeecccCCCcccceE---EeeeE--EeechHHHHHhcC---CCCchhHHHhhhhHhhcCceEEEEEECC----------
Confidence 2222232222221111 23433 7789999986532 2345567778888899999999999987
Q ss_pred CCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHH
Q 012767 162 SPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDEL 241 (456)
Q Consensus 162 ~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~ 241 (456)
+++|++.++|++|||+..+|..||+.|++++|+||||..+|..+|+++|+.
T Consensus 713 ---~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~-------------------------- 763 (951)
T KOG0207|consen 713 ---QLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID-------------------------- 763 (951)
T ss_pred ---EEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc--------------------------
Confidence 999999999999999999999999999999999999999999999999975
Q ss_pred HhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHH
Q 012767 242 IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 321 (456)
Q Consensus 242 ~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~ 321 (456)
++||++.|+||.++|+.+|+.++.|+|+|||+||+|||.+|||||+|+.+++.|.++|||||+.+++..++.+|.+
T Consensus 764 ----~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~L 839 (951)
T KOG0207|consen 764 ----NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDL 839 (951)
T ss_pred ----eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHhcccCccccchHHHHHHHHHhhhhhhcCCCC
Q 012767 322 SRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFL-FTLDTVIAILQTAFTSKKDFGKEERELLWAHAQRTLHGLQPP 396 (456)
Q Consensus 322 ~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~~~-~pl~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (456)
||+++.|+|.|+.|++.++..++...++.|+.+ +-|.+..--+.|++++.+++-.++.++.|..++-.-+..+.+
T Consensus 840 Srkt~~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SSvsVv~sSllLk~~k~p~~~~~~~~e~ 915 (951)
T KOG0207|consen 840 SRKTVKRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASSVSVVLSSLLLKRYKKPTINKLYRYEA 915 (951)
T ss_pred HHHHHhhHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhhHHHhhhHHHHhhccccccccceeccc
Confidence 999999999999999999999888777775522 223333333899999999999888888888876433333333
No 23
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=9.5e-50 Score=439.92 Aligned_cols=334 Identities=21% Similarity=0.259 Sum_probs=262.8
Q ss_pred HHHHhccccEEEcCcccccccCceEEEEEeeecccCCCC-----------------------------------------
Q 012767 3 AIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVD----------------------------------------- 41 (456)
Q Consensus 3 aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~----------------------------------------- 41 (456)
--|+||++++|++|||||||+|.|++.+|.|....++..
T Consensus 380 l~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 459 (1151)
T KOG0206|consen 380 LNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQ 459 (1151)
T ss_pred chhhhcceeEEEEcCcCccccceeeeecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccC
Confidence 359999999999999999999999999999853222111
Q ss_pred ---hHHHHHHHHHhcc-------------cCCCChHHHHHHHhhcCchh----------------hhhcceEEEeecCCC
Q 012767 42 ---ADTVVLMAARASQ-------------VENLDVIDAAIVGMLADPKE----------------ARADIQEVHFLPFDP 89 (456)
Q Consensus 42 ---~~~il~~aa~~~~-------------~~~~~pi~~ai~~~~~~~~~----------------~~~~~~~~~~~pf~~ 89 (456)
..+.....+.|.. .....|.+.|++..+.+.+. ....|++++.++|+|
T Consensus 460 ~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S 539 (1151)
T KOG0206|consen 460 AEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNS 539 (1151)
T ss_pred cchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEecccc
Confidence 0122333333321 11235889999876543211 145789999999999
Q ss_pred CCceEEEEEEecCCcEEEEEcCcHHHHHhhcc-CCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCc-----------
Q 012767 90 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLH-NKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK----------- 157 (456)
Q Consensus 90 ~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~-~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~----------- 157 (456)
.||||||++++++|+..++||||+..|.+++. +.....++..+++++|+.+|+|+||+||++++++++
T Consensus 540 ~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ 619 (1151)
T KOG0206|consen 540 TRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAK 619 (1151)
T ss_pred ccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 455677888899999999999999999999987653
Q ss_pred --------------CCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCcc
Q 012767 158 --------------ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSA 223 (456)
Q Consensus 158 --------------~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~ 223 (456)
+.+|+++.++|..++||+++++++++|+.|+++|||+||+|||..+||..||..|++..+.+...+
T Consensus 620 ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~ 699 (1151)
T KOG0206|consen 620 TSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLII 699 (1151)
T ss_pred hhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEE
Confidence 346899999999999999999999999999999999999999999999999999998876443222
Q ss_pred ccCCc---------------------------------------------hhhhhhcC---ChHHHHh--hcccccccCc
Q 012767 224 LSGQD---------------------------------------------RDESIVAL---PVDELIE--KADGFAGVFP 253 (456)
Q Consensus 224 l~g~~---------------------------------------------~~~~~~~~---~~~~~~~--~~~v~a~~~P 253 (456)
+.... ....+... .+-++.. ++.+|||++|
T Consensus 700 i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sP 779 (1151)
T KOG0206|consen 700 INTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSP 779 (1151)
T ss_pred EecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCH
Confidence 22111 10000000 0112222 3458999999
Q ss_pred hhHHHHHHHHhhc-CCEEEEecCCCCchhhhhhcCeeEEec-cccHHHhhcccEEeeCCCchHHHHHHH-HHHHHHHHHH
Q 012767 254 EHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVL-ISRAIFQRMR 330 (456)
Q Consensus 254 ~~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i~-~~R~i~~~i~ 330 (456)
.||+.+|+..++. +.++++||||+||++|++.|||||+++ ....+|..+||+.+.+ |.-+..++. +||+.|.|+.
T Consensus 780 lQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaq--FrfL~rLLLVHGhW~Y~R~a 857 (1151)
T KOG0206|consen 780 LQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQ--FRFLERLLLVHGHWSYIRLA 857 (1151)
T ss_pred HHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHH--HHHHhhhheeecceeHHHHH
Confidence 9999999999754 889999999999999999999999997 6778899999999977 444444443 8999999999
Q ss_pred HHHHHHHH
Q 012767 331 NYMVRGID 338 (456)
Q Consensus 331 ~~~~y~~~ 338 (456)
+.++|.+.
T Consensus 858 ~~ilyfFY 865 (1151)
T KOG0206|consen 858 KMILYFFY 865 (1151)
T ss_pred HHHHHHHH
Confidence 88888764
No 24
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=3.8e-46 Score=409.63 Aligned_cols=311 Identities=26% Similarity=0.314 Sum_probs=250.0
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcce
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQ 80 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~ 80 (456)
.+++|+|+++|++|||||||||+|+|+|.++.. ..+.++++++.+++..+..++| |+++||+.++.+.+ +
T Consensus 427 ~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~---~~~~~~~~~l~~aa~~e~~s~h-Pia~Ai~~~a~~~~-----~- 496 (741)
T PRK11033 427 GAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHP---ATGISESELLALAAAVEQGSTH-PLAQAIVREAQVRG-----L- 496 (741)
T ss_pred cHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEe---cCCCCHHHHHHHHHHHhcCCCC-HHHHHHHHHHHhcC-----C-
Confidence 368999999999999999999999999988542 2356788899999888877655 99999998764321 1
Q ss_pred EEEeecCCCCCceEEEE-EE-ecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcC
Q 012767 81 EVHFLPFDPTGKRTALT-YI-DSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKE 158 (456)
Q Consensus 81 ~~~~~pf~~~~k~~~v~-~~-~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~ 158 (456)
.+||.+..+.+.-. ++ ..+|+. +..|+++.+.+ +.+.+...++++..+|+|+++++++.
T Consensus 497 ---~~~~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~------- 557 (741)
T PRK11033 497 ---AIPEAESQRALAGSGIEGQVNGER--VLICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND------- 557 (741)
T ss_pred ---CCCCCcceEEEeeEEEEEEECCEE--EEEecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------
Confidence 14665555544211 22 135543 44699988754 12345556778999999999999865
Q ss_pred CCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCCh
Q 012767 159 SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPV 238 (456)
Q Consensus 159 ~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~ 238 (456)
+++|+++|+|++|||++++|++|++.|++++|+|||+..+|..+++++||.
T Consensus 558 ------~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~----------------------- 608 (741)
T PRK11033 558 ------DVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID----------------------- 608 (741)
T ss_pred ------EEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-----------------------
Confidence 999999999999999999999999999999999999999999999999994
Q ss_pred HHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHH
Q 012767 239 DELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITA 318 (456)
Q Consensus 239 ~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~ 318 (456)
.++++.|++|..+|+.+|+. +.|+|+|||+||+|||++|||||+|+++++.++++||+++..+++..++.+
T Consensus 609 --------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~ 679 (741)
T PRK11033 609 --------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQM 679 (741)
T ss_pred --------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHH
Confidence 36789999999999999965 589999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcccCccccchHHHHHHH
Q 012767 319 VLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLDTVIAILQTAFTSKKDFGKEERELLW 383 (456)
Q Consensus 319 i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~~~ 383 (456)
+.+||+++.||++|+.|++.++...+.+.+.. ++|+ ..-.+.+..++..+..++.|...|
T Consensus 680 i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g---~~~~--~~a~~~~~~ss~~v~~Nslrl~~~ 739 (741)
T PRK11033 680 IELSRATHANIRQNITIALGLKAIFLVTTLLG---ITGL--WLAVLADSGATALVTANALRLLRK 739 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhHH--HHHHHHHcChHHHHHHHHHhhccc
Confidence 99999999999999999887765554443321 2221 112256666777777777766554
No 25
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-46 Score=394.47 Aligned_cols=259 Identities=25% Similarity=0.368 Sum_probs=215.0
Q ss_pred cceEEEeecCCCCCceEEEEEEec-CCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCC-
Q 012767 78 DIQEVHFLPFDPTGKRTALTYIDS-EGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEG- 155 (456)
Q Consensus 78 ~~~~~~~~pf~~~~k~~~v~~~~~-~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~- 155 (456)
.+.+++.+||+|.-+||+|++.++ +.+.+.|+|||||.|.+.|. .+.++..+.+.++.|+.+|+|++++|.+.++..
T Consensus 600 ~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~-p~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~ 678 (1140)
T KOG0208|consen 600 EISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICK-PETVPADYQEVLKEYTHQGFRVIALASKELETST 678 (1140)
T ss_pred ceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcC-cccCCccHHHHHHHHHhCCeEEEEEecCccCcch
Confidence 467899999999999999999874 46789999999999999995 456889999999999999999999999999865
Q ss_pred -------CcCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCcc-----
Q 012767 156 -------SKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSA----- 223 (456)
Q Consensus 156 -------~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~----- 223 (456)
+++..|++++|+|++.|++++|+.++.+|++|.+++|+++|+||||..||..+|++|||........+
T Consensus 679 ~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~ 758 (1140)
T KOG0208|consen 679 LQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEP 758 (1140)
T ss_pred HHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccC
Confidence 36778999999999999999999999999999999999999999999999999999999763211000
Q ss_pred -------------------c-----------------------------cCCchhhhh--hcCChHHHHhhcccccccCc
Q 012767 224 -------------------L-----------------------------SGQDRDESI--VALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 224 -------------------l-----------------------------~g~~~~~~~--~~~~~~~~~~~~~v~a~~~P 253 (456)
. .|...+-.. ...-++.++.+..+|||++|
T Consensus 759 ~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP 838 (1140)
T KOG0208|consen 759 PEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSP 838 (1140)
T ss_pred CccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCc
Confidence 0 000000000 00013456678889999999
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHHHHH----HHHHH
Q 012767 254 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRA----IFQRM 329 (456)
Q Consensus 254 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~~R~----i~~~i 329 (456)
.||.++|+.||+-|+.|+|||||+||+.|||+||+||+++++ .|.-||.+.-.-++.+.++..|++||+ .|..+
T Consensus 839 ~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSea--EASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~F 916 (1140)
T KOG0208|consen 839 DQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEA--EASVAAPFTSKTPSISCVPDVIREGRAALVTSFACF 916 (1140)
T ss_pred hhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhh--hHhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHH
Confidence 999999999999999999999999999999999999999753 467788888777899999999999998 35555
Q ss_pred HHHHHHHHHH
Q 012767 330 RNYMVRGIDG 339 (456)
Q Consensus 330 ~~~~~y~~~~ 339 (456)
|-...|+++.
T Consensus 917 kYMalYs~iq 926 (1140)
T KOG0208|consen 917 KYMALYSAIQ 926 (1140)
T ss_pred HHHHHHHHHH
Confidence 5555666544
No 26
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=1.2e-44 Score=383.67 Aligned_cols=261 Identities=35% Similarity=0.526 Sum_probs=226.8
Q ss_pred hHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcceE
Q 012767 2 SAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQE 81 (456)
Q Consensus 2 ~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~ 81 (456)
+++|+||++|++|||||||||+|+|+|.++++. . + +.. +.||++.|++.++... .
T Consensus 222 ~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~--~-~-------------~~~-s~hp~~~ai~~~~~~~--------~ 276 (499)
T TIGR01494 222 NALEELGKVDYICSDKTGTLTKNEMSFKKVSVL--G-G-------------EYL-SGHPDERALVKSAKWK--------I 276 (499)
T ss_pred hhhhhccCCcEEEeeCCCccccCceEEEEEEec--C-C-------------CcC-CCChHHHHHHHHhhhc--------C
Confidence 689999999999999999999999999987531 1 1 122 3469999999877531 2
Q ss_pred EEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCC
Q 012767 82 VHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSG 161 (456)
Q Consensus 82 ~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e 161 (456)
++..||++..+++++++.+.++ .++||+++.+.+.|.. +.+..+++..+|+|++++|++.
T Consensus 277 ~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~---------- 336 (499)
T TIGR01494 277 LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE---------- 336 (499)
T ss_pred cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC----------
Confidence 3567999999999888765322 4789999999998742 2334556889999999999876
Q ss_pred CCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHH
Q 012767 162 SPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDEL 241 (456)
Q Consensus 162 ~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~ 241 (456)
+++|++.++|++|++++++|+.|+++|++++|+|||+..+|..+|+++||
T Consensus 337 ---~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi--------------------------- 386 (499)
T TIGR01494 337 ---TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI--------------------------- 386 (499)
T ss_pred ---eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------
Confidence 89999999999999999999999999999999999999999999999987
Q ss_pred HhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHH
Q 012767 242 IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 321 (456)
Q Consensus 242 ~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~ 321 (456)
+++++|++|.++|+.+|+.|+.|+|+|||.||+|||+.|||||+|+ ++++||++++++++..++.++.+
T Consensus 387 ------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~ 455 (499)
T TIGR01494 387 ------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKE 455 (499)
T ss_pred ------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999997 68999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012767 322 SRAIFQRMRNYMVRGIDGLSSTEFIQV 348 (456)
Q Consensus 322 ~R~i~~~i~~~~~y~~~~~~~~i~l~~ 348 (456)
||++++++++++.|++.++...+.+.+
T Consensus 456 ~r~~~~~i~~~~~~~~~~n~~~~~~a~ 482 (499)
T TIGR01494 456 GRKTFSTIKSNIFWAIAYNLILIPLAA 482 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998876665554443
No 27
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-46 Score=385.03 Aligned_cols=329 Identities=23% Similarity=0.277 Sum_probs=249.2
Q ss_pred HHHHhccccEEEcCcccccccCceEEEEEeeecccCCCC-hHHHH---------------------------------HH
Q 012767 3 AIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVD-ADTVV---------------------------------LM 48 (456)
Q Consensus 3 aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~-~~~il---------------------------------~~ 48 (456)
.-|+||+|.++.+|||||||+|.|.++|+++.....+.+ -+++- ..
T Consensus 400 IPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~a 479 (1051)
T KOG0210|consen 400 IPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLA 479 (1051)
T ss_pred ChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHH
Confidence 359999999999999999999999999987643322211 11111 11
Q ss_pred HHHhccc----CC--------CChHHHHHHHhh-----------------cCchhhhhcceEEEeecCCCCCceEEEEEE
Q 012767 49 AARASQV----EN--------LDVIDAAIVGML-----------------ADPKEARADIQEVHFLPFDPTGKRTALTYI 99 (456)
Q Consensus 49 aa~~~~~----~~--------~~pi~~ai~~~~-----------------~~~~~~~~~~~~~~~~pf~~~~k~~~v~~~ 99 (456)
.+.|.+. ++ ..|-+-||+..- .++.....+|+++..+||++..|||+++++
T Consensus 480 lalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr 559 (1051)
T KOG0210|consen 480 LALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVR 559 (1051)
T ss_pred HHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEe
Confidence 1222111 00 123444443221 012222357999999999999999999999
Q ss_pred ec-CCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcC--------------------
Q 012767 100 DS-EGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKE-------------------- 158 (456)
Q Consensus 100 ~~-~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~-------------------- 158 (456)
+. .|+...|.|||+.+|..... ..+++++...+|+++|+|+|.+|.+.+++++++
T Consensus 560 ~e~~~evtfylKGAD~VMs~iVq----~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~m 635 (1051)
T KOG0210|consen 560 DETTEEVTFYLKGADVVMSGIVQ----YNDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKM 635 (1051)
T ss_pred cCCCceEEEEEecchHHHhcccc----cchhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHH
Confidence 85 68899999999999877653 345777888999999999999999999876422
Q ss_pred ------CCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC------------
Q 012767 159 ------SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP------------ 220 (456)
Q Consensus 159 ------~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~------------ 220 (456)
..|.+++++|+.+.+|+++++++.+++.|+++||+|||+|||..+||..+|+..++......
T Consensus 636 a~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~d 715 (1051)
T KOG0210|consen 636 ANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGD 715 (1051)
T ss_pred HHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchH
Confidence 34889999999999999999999999999999999999999999999999999998753221
Q ss_pred --------------CccccCCchhhhhhc--CChHHHHh--hcccccccCchhHHHHHHHHhhc-CCEEEEecCCCCchh
Q 012767 221 --------------SSALSGQDRDESIVA--LPVDELIE--KADGFAGVFPEHKYEIVKHLQAR-NHICGMIGNGVNDAP 281 (456)
Q Consensus 221 --------------~~~l~g~~~~~~~~~--~~~~~~~~--~~~v~a~~~P~~K~~iV~~lq~~-g~~v~~iGDG~ND~~ 281 (456)
..++.|+...--+.. .++-++.. .+.++|||+|.||+++++.+|++ |..|++||||-||+.
T Consensus 716 ah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVs 795 (1051)
T KOG0210|consen 716 AHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVS 795 (1051)
T ss_pred HHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccch
Confidence 123333332221111 11223322 34589999999999999999987 889999999999999
Q ss_pred hhhhcCeeEEec-cccHHHhhcccEEeeCCCchHHHHHHH-HHHHHHHHHHHHHHHHH
Q 012767 282 ALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITAVL-ISRAIFQRMRNYMVRGI 337 (456)
Q Consensus 282 aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~i~-~~R~i~~~i~~~~~y~~ 337 (456)
|+++||+||++. ....+|.-|||+.+++ |+.+-.++. +||..|+|-.+...|-+
T Consensus 796 MIq~A~~GiGI~gkEGkQASLAADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfVi 851 (1051)
T KOG0210|consen 796 MIQAADVGIGIVGKEGKQASLAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVI 851 (1051)
T ss_pred heeecccceeeecccccccchhccccHHH--HHHHHHHhhccccchHHHHHHHHHHHH
Confidence 999999999985 7788999999999977 888888777 89999999876655544
No 28
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=5.6e-43 Score=390.76 Aligned_cols=321 Identities=27% Similarity=0.321 Sum_probs=263.1
Q ss_pred hHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcceE
Q 012767 2 SAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQE 81 (456)
Q Consensus 2 ~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~ 81 (456)
+++|+|+++|++|||||||||+|+|+|.+... ..+.++++++.+++.++..++| |+++||+.++.+.. ....
T Consensus 509 ~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~---~~~~~~~~~l~~a~~~e~~s~h-p~a~Ai~~~~~~~~--~~~~-- 580 (834)
T PRK10671 509 DALQRASTLDTLVFDKTGTLTEGKPQVVAVKT---FNGVDEAQALRLAAALEQGSSH-PLARAILDKAGDMT--LPQV-- 580 (834)
T ss_pred HHHHhhcCCCEEEEcCCCccccCceEEEEEEc---cCCCCHHHHHHHHHHHhCCCCC-HHHHHHHHHHhhCC--CCCc--
Confidence 68999999999999999999999999987532 2356778889999888887776 99999998764211 0111
Q ss_pred EEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCC
Q 012767 82 VHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSG 161 (456)
Q Consensus 82 ~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e 161 (456)
.+|....+.. +... .+|. .+.+|+++++.+... ..+.+...+++++++|.++++++++.
T Consensus 581 ---~~~~~~~g~G-v~~~-~~g~--~~~~G~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~v~va~~~---------- 639 (834)
T PRK10671 581 ---NGFRTLRGLG-VSGE-AEGH--ALLLGNQALLNEQQV----DTKALEAEITAQASQGATPVLLAVDG---------- 639 (834)
T ss_pred ---ccceEecceE-EEEE-ECCE--EEEEeCHHHHHHcCC----ChHHHHHHHHHHHhCCCeEEEEEECC----------
Confidence 1222222111 1111 2453 466799998754221 12345666778899999999999875
Q ss_pred CCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHH
Q 012767 162 SPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDEL 241 (456)
Q Consensus 162 ~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~ 241 (456)
.++|++.+.|++||+++++|++|++.|++++|+|||+..++..+++++||.
T Consensus 640 ---~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~-------------------------- 690 (834)
T PRK10671 640 ---KAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID-------------------------- 690 (834)
T ss_pred ---EEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC--------------------------
Confidence 899999999999999999999999999999999999999999999999995
Q ss_pred HhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHH
Q 012767 242 IEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLI 321 (456)
Q Consensus 242 ~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~ 321 (456)
++|+++.|++|.++++.++.+++.|+|+|||.||++|++.||+||+|+++++.++++||++++.+++..|+.++++
T Consensus 691 ----~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l 766 (834)
T PRK10671 691 ----EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAI 766 (834)
T ss_pred ----EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHH
Confidence 3688999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHhcccCccccchHHHHHHHH
Q 012767 322 SRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFL--FTLDTVIAILQTAFTSKKDFGKEERELLWA 384 (456)
Q Consensus 322 ~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~~~--~pl~~~~~l~~~~~~~~~~~~~~~~~~~~~ 384 (456)
||+++.+|++|+.|++.++..++.+.++.+... +.++|+.-...|.+|+..+..++.|...|.
T Consensus 767 ~r~~~~~i~~Nl~~a~~yn~~~i~~a~g~~~p~~g~~l~p~~a~~~m~~ss~~vv~nslrl~~~~ 831 (834)
T PRK10671 767 SRATLRNMKQNLLGAFIYNSLGIPIAAGILWPFTGTLLNPVVAGAAMALSSITVVSNANRLLRFK 831 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhhhcccCHHHHHHHhcccceeehhhhHHhcCCC
Confidence 999999999999999998888887776554322 235666666899999999999988876443
No 29
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=3.4e-41 Score=361.24 Aligned_cols=290 Identities=29% Similarity=0.383 Sum_probs=233.5
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCC--hHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhc
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVD--ADTVVLMAARASQVENLDVIDAAIVGMLADPKEARAD 78 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~--~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~ 78 (456)
++++|+|+++|++|||||||||+|+|+|.++.. . .+.+ .++++.+++.++..++| |++.||+.++...+.....
T Consensus 237 ~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~--~-~~~~~~~~~~l~~a~~~e~~~~h-p~~~Ai~~~~~~~~~~~~~ 312 (556)
T TIGR01525 237 GDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEP--L-DDASISEEELLALAAALEQSSSH-PLARAIVRYAKKRGLELPK 312 (556)
T ss_pred chHHHHhhcCCEEEEeCCCCCcCCceEEEEEEe--c-CCCCccHHHHHHHHHHHhccCCC-hHHHHHHHHHHhcCCCccc
Confidence 468999999999999999999999999988542 1 2333 67888888888877665 9999999887532211110
Q ss_pred ce-EEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCc
Q 012767 79 IQ-EVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK 157 (456)
Q Consensus 79 ~~-~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~ 157 (456)
+ ....+| .+..... .+|. ..+..|+++++ + +. ..+. ......++++.++|+|+++++++.
T Consensus 313 -~~~~~~~~----~~gi~~~---~~g~-~~~~lg~~~~~-~-~~-~~~~-~~~~~~~~~~~~~g~~~~~v~~~~------ 373 (556)
T TIGR01525 313 -QEDVEEVP----GKGVEAT---VDGQ-EEVRIGNPRLL-E-LA-AEPI-SASPDLLNEGESQGKTVVFVAVDG------ 373 (556)
T ss_pred -ccCeeEec----CCeEEEE---ECCe-eEEEEecHHHH-h-hc-CCCc-hhhHHHHHHHhhCCcEEEEEEECC------
Confidence 1 111221 1111111 2342 34567999877 2 11 1111 223455677889999999999865
Q ss_pred CCCCCCceEeEecccCCCCCcchHHHHHHHHhCC-CeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcC
Q 012767 158 ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLG-LGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVAL 236 (456)
Q Consensus 158 ~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~G-i~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~ 236 (456)
+++|.+.++|++||+++++|+.|++.| ++++|+|||+..++..+++++|+.
T Consensus 374 -------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~--------------------- 425 (556)
T TIGR01525 374 -------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID--------------------- 425 (556)
T ss_pred -------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC---------------------
Confidence 999999999999999999999999999 999999999999999999999995
Q ss_pred ChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHH
Q 012767 237 PVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVII 316 (456)
Q Consensus 237 ~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~ 316 (456)
++|+++.|++|.++++.++..++.|+|+|||.||++|+++||+||+++++++.+++.||+++.+++++.+.
T Consensus 426 ---------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~~l~ 496 (556)
T TIGR01525 426 ---------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLSSLP 496 (556)
T ss_pred ---------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012767 317 TAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLE 350 (456)
Q Consensus 317 ~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~ 350 (456)
.++++||+++++|++++.|++.++..++.+.+..
T Consensus 497 ~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g 530 (556)
T TIGR01525 497 TAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGG 530 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888777666555433
No 30
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=3e-41 Score=361.32 Aligned_cols=283 Identities=30% Similarity=0.389 Sum_probs=232.7
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcce
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQ 80 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~ 80 (456)
.+++|+|+++|++|||||||||+|+|+|.++.. ..+.+.++++.+++.+++.++| |+++||+.++...+.....++
T Consensus 268 ~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~---~~~~~~~~~l~~aa~~e~~s~H-Pia~Ai~~~~~~~~~~~~~~~ 343 (562)
T TIGR01511 268 GDALERAANIDTVVFDKTGTLTQGKPTVTDVHV---FGDRDRTELLALAAALEAGSEH-PLAKAIVSYAKEKGITLVEVS 343 (562)
T ss_pred hHHHHHhhCCCEEEECCCCCCcCCCEEEEEEec---CCCCCHHHHHHHHHHHhccCCC-hHHHHHHHHHHhcCCCcCCCC
Confidence 368999999999999999999999999998542 2356678899999988888776 999999988753221111122
Q ss_pred EEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCC
Q 012767 81 EVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESS 160 (456)
Q Consensus 81 ~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~ 160 (456)
.++.+|. +..... .+| ..+..|+++++.+.. ... .++.++|.+++.++.+.
T Consensus 344 ~~~~~~g----~Gi~~~---~~g--~~~~iG~~~~~~~~~---~~~--------~~~~~~g~~~~~~~~~~--------- 394 (562)
T TIGR01511 344 DFKAIPG----IGVEGT---VEG--TKIQLGNEKLLGENA---IKI--------DGKAEQGSTSVLVAVNG--------- 394 (562)
T ss_pred CeEEECC----ceEEEE---ECC--EEEEEECHHHHHhCC---CCC--------ChhhhCCCEEEEEEECC---------
Confidence 2222221 111111 244 456789999875421 111 12457899999998765
Q ss_pred CCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHH
Q 012767 161 GSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240 (456)
Q Consensus 161 e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~ 240 (456)
+++|++.++|++||+++++|+.|++.|++++|+|||+...+..+++++|+.
T Consensus 395 ----~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------------------------- 445 (562)
T TIGR01511 395 ----ELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------------------------- 445 (562)
T ss_pred ----EEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------
Confidence 999999999999999999999999999999999999999999999999993
Q ss_pred HHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 241 ~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
+|+++.|++|.++++.++.+++.|+|+|||.||++|+++||+||+++.+++.++++||+++.++++..++.++.
T Consensus 446 ------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~ 519 (562)
T TIGR01511 446 ------VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAID 519 (562)
T ss_pred ------EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHH
Confidence 47888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 012767 321 ISRAIFQRMRNYMVRGIDGLSSTEFIQVLEL 351 (456)
Q Consensus 321 ~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~ 351 (456)
+||+++++|++|+.|++.++...+.+.++.+
T Consensus 520 lsr~~~~~i~qn~~~a~~~n~~~i~la~~~~ 550 (562)
T TIGR01511 520 LSRKTLRRIKQNLLWAFGYNVIAIPIAAGVL 550 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999988877776665443
No 31
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=3.5e-40 Score=351.57 Aligned_cols=295 Identities=29% Similarity=0.396 Sum_probs=232.7
Q ss_pred ChHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcce
Q 012767 1 MSAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQ 80 (456)
Q Consensus 1 l~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~ 80 (456)
++++|+++++|++|||||||||+|+|+|.++.. .+++.+++.++..++| |++.||+.++.+.. .+.
T Consensus 237 ~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~---------~~~l~~a~~~e~~~~h-p~~~Ai~~~~~~~~----~~~ 302 (536)
T TIGR01512 237 GAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP---------AEVLRLAAAAEQASSH-PLARAIVDYARKRE----NVE 302 (536)
T ss_pred cHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH---------HHHHHHHHHHhccCCC-cHHHHHHHHHHhcC----CCc
Confidence 468999999999999999999999999987531 3688888877776655 99999998875321 222
Q ss_pred EEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCC
Q 012767 81 EVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESS 160 (456)
Q Consensus 81 ~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~ 160 (456)
....+|.. .... ..+|. .+..|+++++.+.. . ..+..+|.+++.++.+.
T Consensus 303 ~~~~~~g~----gi~~---~~~g~--~~~ig~~~~~~~~~-----~--------~~~~~~~~~~~~v~~~~--------- 351 (536)
T TIGR01512 303 SVEEVPGE----GVRA---VVDGG--EVRIGNPRSLEAAV-----G--------ARPESAGKTIVHVARDG--------- 351 (536)
T ss_pred ceEEecCC----eEEE---EECCe--EEEEcCHHHHhhcC-----C--------cchhhCCCeEEEEEECC---------
Confidence 23333321 1111 12454 34569987764321 0 14567888988887754
Q ss_pred CCCceEeEecccCCCCCcchHHHHHHHHhCCC-eEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChH
Q 012767 161 GSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 239 (456)
Q Consensus 161 e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi-~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 239 (456)
.++|.+.++|++||+++++|+.|++.|+ +++|+|||+..++..+++++|+.
T Consensus 352 ----~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~------------------------ 403 (536)
T TIGR01512 352 ----TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID------------------------ 403 (536)
T ss_pred ----EEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh------------------------
Confidence 9999999999999999999999999999 99999999999999999999995
Q ss_pred HHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEec-cccHHHhhcccEEeeCCCchHHHHH
Q 012767 240 ELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DATDAARSAADIVLTEPGLNVIITA 318 (456)
Q Consensus 240 ~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~-~~~~~a~~aaDivl~~~~l~~i~~~ 318 (456)
++|+++.|++|..+++.++.+++.|+|+|||.||++|++.||+||+++ ++++.++++||+++.++++..+..+
T Consensus 404 ------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~ 477 (536)
T TIGR01512 404 ------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQA 477 (536)
T ss_pred ------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHH
Confidence 368899999999999999999999999999999999999999999999 7899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcccCccccchHHH
Q 012767 319 VLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNFLFTLDTVIAILQTAFTSKKDFGKEER 379 (456)
Q Consensus 319 i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~ 379 (456)
+.+||++++++++++.|++.++..++.+.+..+ +.|+.....|.+++..+..++.|
T Consensus 478 i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G~-----~~p~~aa~~m~~ss~~v~~ns~r 533 (536)
T TIGR01512 478 IRLARRTRRIVKQNVVIALGIILLLILLALFGV-----LPLWLAVLGHEGSTVLVILNALR 533 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----ccHHHHHHHHcChHHHHHHHHHh
Confidence 999999999999999888877666655544221 11112224455555555444443
No 32
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-39 Score=324.79 Aligned_cols=272 Identities=27% Similarity=0.398 Sum_probs=234.7
Q ss_pred hHHHHhccccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchh--hhhcc
Q 012767 2 SAIVDMAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKE--ARADI 79 (456)
Q Consensus 2 ~aiE~l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~--~~~~~ 79 (456)
.|+|..|.+|++..|||||+|.|+-.-.+++ ..++.+.+++...|..++-... .|-.+.|+..+++... .....
T Consensus 291 RAVEaaGDvdtliLDKTGTIT~GnR~A~~f~---p~~gv~~~~la~aa~lsSl~De-TpEGrSIV~LA~~~~~~~~~~~~ 366 (681)
T COG2216 291 RAVEAAGDVDTLLLDKTGTITLGNRQASEFI---PVPGVSEEELADAAQLASLADE-TPEGRSIVELAKKLGIELREDDL 366 (681)
T ss_pred chhhhcCCccEEEecccCceeecchhhhhee---cCCCCCHHHHHHHHHHhhhccC-CCCcccHHHHHHHhccCCCcccc
Confidence 3789999999999999999999988777654 3468899999888877776544 4778888876653221 11112
Q ss_pred e-EEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCc-hhhhHHHHHHHHHHHccCeeeEEeeeecCCCCc
Q 012767 80 Q-EVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKS-KIGRKVNAVINKFAERGLRSLAVAYQEVPEGSK 157 (456)
Q Consensus 80 ~-~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~-~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~ 157 (456)
+ ...+.||+...++..+.. .++ ..+.||+.+.+.+...... ..+..++...++.++.|-+.|.|+.+.
T Consensus 367 ~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~~~~------ 436 (681)
T COG2216 367 QSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVVENG------ 436 (681)
T ss_pred cccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEEECC------
Confidence 2 357899998877665443 233 5677999999998886433 478899999999999999999999876
Q ss_pred CCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCC
Q 012767 158 ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALP 237 (456)
Q Consensus 158 ~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~ 237 (456)
+++|++.++|-++|+.+|-+.+||+.||+.+|+||||+.||..||.+.|++
T Consensus 437 -------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD---------------------- 487 (681)
T COG2216 437 -------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD---------------------- 487 (681)
T ss_pred -------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch----------------------
Confidence 999999999999999999999999999999999999999999999999996
Q ss_pred hHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHH
Q 012767 238 VDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIIT 317 (456)
Q Consensus 238 ~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~ 317 (456)
+..|+++||+|.+.|+.-|.+|+.|+|+|||.||+|||.+||||+||.+|+.+||++++.|=+++|-..+.+
T Consensus 488 --------dfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAAkEAaNMVDLDS~PTKlie 559 (681)
T COG2216 488 --------DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSNPTKLIE 559 (681)
T ss_pred --------hhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccHHHHHhhcccccCCCccceeh
Confidence 468999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 012767 318 AVLISRA 324 (456)
Q Consensus 318 ~i~~~R~ 324 (456)
.++.|++
T Consensus 560 vV~IGKq 566 (681)
T COG2216 560 VVEIGKQ 566 (681)
T ss_pred Hhhhhhh
Confidence 9999987
No 33
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-40 Score=341.50 Aligned_cols=287 Identities=26% Similarity=0.338 Sum_probs=223.9
Q ss_pred hccccEEEcCcccccccCceEEEEEeeecccC--------CCChHHHHHHHHHhc-----ccCCCChHHHHHHHhhcCch
Q 012767 7 MAGMDVLCCDKTGTLTLNKLTVDKNLIEIFAG--------GVDADTVVLMAARAS-----QVENLDVIDAAIVGMLADPK 73 (456)
Q Consensus 7 l~~i~~i~~DKTGTLT~~~~~v~~~~i~~~~~--------~~~~~~il~~aa~~~-----~~~~~~pi~~ai~~~~~~~~ 73 (456)
.|++|+.|||||||||+..|.|..+--. ..+ ....+.+..+|++.+ ..--.||+++|.+..+++..
T Consensus 476 AGkvdvCCFDKTGTLT~d~lvv~Gvag~-~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~W~~ 554 (1160)
T KOG0209|consen 476 AGKVDVCCFDKTGTLTEDDLVVEGVAGL-SADEGALTPASKAPNETVLVLASCHSLVLLEDKLVGDPLEKATLEAVGWNL 554 (1160)
T ss_pred CCceeEEEecCCCccccccEEEEecccc-cCCcccccchhhCCchHHHHHHHHHHHHHhcCcccCChHHHHHHHhcCccc
Confidence 5899999999999999999999873210 001 112234554544332 23356899999998775321
Q ss_pred h------hh----hcceEEEeecCCCCCceEEEEEEec----CCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHH
Q 012767 74 E------AR----ADIQEVHFLPFDPTGKRTALTYIDS----EGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAE 139 (456)
Q Consensus 74 ~------~~----~~~~~~~~~pf~~~~k~~~v~~~~~----~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~ 139 (456)
+ .+ ...++.+.+.|.|.-|||+++.... .-+++..+|||||.|.++.. +++..+++...+|++
T Consensus 555 ~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~---dvP~dY~~iYk~ytR 631 (1160)
T KOG0209|consen 555 EKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLR---DVPKDYDEIYKRYTR 631 (1160)
T ss_pred ccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHH---hCchhHHHHHHHHhh
Confidence 1 11 2467788999999999999876532 13578889999999998774 678889999999999
Q ss_pred ccCeeeEEeeeecCC--------CCcCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH
Q 012767 140 RGLRSLAVAYQEVPE--------GSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR 211 (456)
Q Consensus 140 ~Glr~l~vA~~~~~~--------~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~ 211 (456)
+|.|||+++|+.++. ..++..|+++.|.|++.|.-|+|+|++++|+.|++.+++++||||||+.||..+|++
T Consensus 632 ~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~ 711 (1160)
T KOG0209|consen 632 QGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKE 711 (1160)
T ss_pred ccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehhe
Confidence 999999999999873 246788999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCc---------------------------------------cccCCchhhhhhcCChHHHHhhcccccccC
Q 012767 212 LGMGTNMYPSS---------------------------------------ALSGQDRDESIVALPVDELIEKADGFAGVF 252 (456)
Q Consensus 212 lGi~~~~~~~~---------------------------------------~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~ 252 (456)
+||..+-.+.. ++.|+..+.......+.+++....+|||+.
T Consensus 712 v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARva 791 (1160)
T KOG0209|consen 712 VGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVA 791 (1160)
T ss_pred eeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeC
Confidence 99976421111 112222222222222345666777999999
Q ss_pred chhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccH
Q 012767 253 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATD 297 (456)
Q Consensus 253 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~ 297 (456)
|.||..++..|++.|+.++|||||.||+.|||+||||||+-+++.
T Consensus 792 P~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~ 836 (1160)
T KOG0209|consen 792 PKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPE 836 (1160)
T ss_pred hhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCCh
Confidence 999999999999999999999999999999999999999865444
No 34
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.96 E-value=4.7e-29 Score=234.22 Aligned_cols=211 Identities=32% Similarity=0.413 Sum_probs=157.4
Q ss_pred ccEEEcCcccccccCceEEEEEeeecccCCCChHHHHHHHHHhcccCCCChHHHHHHHhhcCchhhhhcceEEEeecCCC
Q 012767 10 MDVLCCDKTGTLTLNKLTVDKNLIEIFAGGVDADTVVLMAARASQVENLDVIDAAIVGMLADPKEARADIQEVHFLPFDP 89 (456)
Q Consensus 10 i~~i~~DKTGTLT~~~~~v~~~~i~~~~~~~~~~~il~~aa~~~~~~~~~pi~~ai~~~~~~~~~~~~~~~~~~~~pf~~ 89 (456)
|++||||||||||+|++.+ . . .....++.++...+..++| |+..++..+....... ........+
T Consensus 1 i~~i~fDktGTLt~~~~~v-~-----~---~~~~~~~~~~~~~~~~s~~-p~~~~~~~~~~~~~~~-~~~~~~~~~---- 65 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV-A-----P---PSNEAALAIAAALEQGSEH-PIGKAIVEFAKNHQWS-KSLESFSEF---- 65 (215)
T ss_dssp ESEEEEECCTTTBESHHEE-E-----S---CSHHHHHHHHHHHHCTSTS-HHHHHHHHHHHHHHHH-SCCEEEEEE----
T ss_pred CeEEEEecCCCcccCeEEE-E-----e---ccHHHHHHHHHHhhhcCCC-cchhhhhhhhhhccch-hhhhhheee----
Confidence 6899999999999999999 1 1 5667778888777777775 9999999876542211 111111111
Q ss_pred CCceEEEEEEecCCcEEEEEcCcHHHHHhhccCCchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCCCCceEeEe
Q 012767 90 TGKRTALTYIDSEGKMHRVTKGSPEQILNLLHNKSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGL 169 (456)
Q Consensus 90 ~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~ 169 (456)
..++..... ++. +. |+++++.+..... . ............|.+.+.++.+ +.++|.
T Consensus 66 -~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 121 (215)
T PF00702_consen 66 -IGRGISGDV--DGI---YL-GSPEWIHELGIRV--I--SPDLVEEIQESQGRTVIVLAVN-------------LIFLGL 121 (215)
T ss_dssp -TTTEEEEEE--HCH---EE-HHHHHHHHHHHHH--H--HHHHHHHHHHHHHHHCEEEEES-------------HEEEEE
T ss_pred -eeccccccc--ccc---cc-ccchhhhhccccc--c--ccchhhhHHHhhCCcccceeec-------------CeEEEE
Confidence 111211111 122 33 8888887655321 1 1122223345666667777653 499999
Q ss_pred cccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhccccc
Q 012767 170 IPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 249 (456)
Q Consensus 170 i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a 249 (456)
+.+.|++||+++++|+.|+++|++++|+|||+..++..+++.+||... .+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~----------------------------~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS----------------------------IVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE----------------------------EEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc----------------------------cccc
Confidence 999999999999999999999999999999999999999999999521 3799
Q ss_pred cc--CchhH--HHHHHHHhhcCCEEEEecCCCCchhhhhhcC
Q 012767 250 GV--FPEHK--YEIVKHLQARNHICGMIGNGVNDAPALKKAD 287 (456)
Q Consensus 250 ~~--~P~~K--~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Ad 287 (456)
++ +|++| ..+++.|+.+++.|+|+|||+||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
No 35
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.64 E-value=1.2e-15 Score=128.48 Aligned_cols=116 Identities=28% Similarity=0.414 Sum_probs=106.7
Q ss_pred eEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhh
Q 012767 165 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEK 244 (456)
Q Consensus 165 ~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 244 (456)
.+.+.++---++-++++++|++|++. ++|++.|||...+....|..+||+..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 67888888889999999999999999 99999999999999999999999743
Q ss_pred cccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEec---cccHHHhhcccEEeeC
Q 012767 245 ADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA---DATDAARSAADIVLTE 309 (456)
Q Consensus 245 ~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~---~~~~~a~~aaDivl~~ 309 (456)
.+|+...|+.|..+++.|+++++.|.|+|||.||.+||+.||+||..- +.+..+.++||+|+-+
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~ 138 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE 138 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh
Confidence 479999999999999999999999999999999999999999999863 5777888999999855
No 36
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.21 E-value=6.1e-11 Score=118.76 Aligned_cols=131 Identities=19% Similarity=0.241 Sum_probs=99.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccc-cccCc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGVFP 253 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~-a~~~P 253 (456)
++.|++.+.|+.|++.|+++.++||.....+..+.+++|+.....+...+..... .. .+. .-+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~l----tg----------~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKL----TG----------NVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEE----Ee----------EecCccCCc
Confidence 5889999999999999999999999998888899999998531100000000000 00 000 01234
Q ss_pred hhHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 254 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 254 ~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
+.|.++++.+.++ ...|+|+|||.||.+|++.||+|||+ ++.+..++.||.++..+++.++..++-
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 6788888887655 35799999999999999999999999 999999999999999999999887654
No 37
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.20 E-value=9.7e-11 Score=109.94 Aligned_cols=131 Identities=15% Similarity=0.145 Sum_probs=95.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+..-..+...+.+.. .+. ......++
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g---~~t------------G~~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD---RVV------------GYQLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC---eeE------------CeeecCcc
Confidence 57999999999999975 999999999999999999999963211111111000 000 00114578
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLIS 322 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~~ 322 (456)
+|..+++.+++.+..+.|+|||.||.+|++.||+||++... +..+++||=+-.-.+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak-~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAP-ENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCC-HHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 89999999988888899999999999999999999999644 44555554333335677777777665
No 38
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.14 E-value=1.5e-10 Score=110.32 Aligned_cols=145 Identities=26% Similarity=0.342 Sum_probs=101.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccc-c---CC-----chhh------hh-----
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-S---GQ-----DRDE------SI----- 233 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~--~~~~l-~---g~-----~~~~------~~----- 233 (456)
+.+.+.++|++|++.|++++++||+....+..+.+.+|+..... +...+ . +. ..+. ..
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFP 100 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhcc
Confidence 67899999999999999999999999999999999999864211 11110 0 00 0000 00
Q ss_pred ---------------------hcCC---hHHHHhhcc---------cccccCch--hHHHHHHHHhhc----CCEEEEec
Q 012767 234 ---------------------VALP---VDELIEKAD---------GFAGVFPE--HKYEIVKHLQAR----NHICGMIG 274 (456)
Q Consensus 234 ---------------------~~~~---~~~~~~~~~---------v~a~~~P~--~K~~iV~~lq~~----g~~v~~iG 274 (456)
.... ..+.+.+.. .+.++.|. .|...++.+.+. ...++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~G 180 (230)
T PRK01158 101 EASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIG 180 (230)
T ss_pred ccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEC
Confidence 0000 001111110 01233343 378777777654 34599999
Q ss_pred CCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 275 NGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 275 DG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
|+.||.+|++.|++|+||+|+.+.++++||+|..+++-.++..+++
T Consensus 181 D~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 181 DSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 9999999999999999999999999999999999899999988876
No 39
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.12 E-value=1.7e-10 Score=112.82 Aligned_cols=66 Identities=23% Similarity=0.234 Sum_probs=58.2
Q ss_pred hHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
.|+..++.|.+. ...|+++|||.||.+||+.|++|+||+||.+.+|++||+|..+++-.++..+|+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 577777776654 245999999999999999999999999999999999999999899999988876
No 40
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.09 E-value=8.3e-10 Score=107.63 Aligned_cols=143 Identities=21% Similarity=0.241 Sum_probs=104.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCC----------------------------
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQ---------------------------- 227 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~---------------------------- 227 (456)
+.+.++++|+++++.|++|+++||.....+..+.+.+++..... ..+|.
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I---~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~ 97 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLI---TFNGALIYNGGELLFQKPLSREDVEELLELLED 97 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEE---EeCCeEEecCCcEEeeecCCHHHHHHHHHHHHh
Confidence 88999999999999999999999999999999999999975110 00000
Q ss_pred -----------c-----hhh---------------------hhh-------c---CChHHHH---hh-c----c------
Q 012767 228 -----------D-----RDE---------------------SIV-------A---LPVDELI---EK-A----D------ 246 (456)
Q Consensus 228 -----------~-----~~~---------------------~~~-------~---~~~~~~~---~~-~----~------ 246 (456)
. ... ... . ....++. .+ . .
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~ 177 (264)
T COG0561 98 FQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSG 177 (264)
T ss_pred ccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcC
Confidence 0 000 000 0 0001111 00 0 0
Q ss_pred -cccccCc--hhHHHHHHHHhhc-CC---EEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHH
Q 012767 247 -GFAGVFP--EHKYEIVKHLQAR-NH---ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 247 -v~a~~~P--~~K~~iV~~lq~~-g~---~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i 319 (456)
.+..+.| .+|+..++.+.+. |- .|+++||+.||.+||+.|+.||||+|+.+.+++.||++...++-.+|..+|
T Consensus 178 ~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l 257 (264)
T COG0561 178 PISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDEDGVAEAL 257 (264)
T ss_pred CceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccchHHHHHH
Confidence 1134444 4688888888774 43 499999999999999999999999999999999999888999999999888
Q ss_pred HH
Q 012767 320 LI 321 (456)
Q Consensus 320 ~~ 321 (456)
+.
T Consensus 258 ~~ 259 (264)
T COG0561 258 EK 259 (264)
T ss_pred HH
Confidence 73
No 41
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.07 E-value=5.1e-10 Score=109.67 Aligned_cols=66 Identities=17% Similarity=0.189 Sum_probs=57.8
Q ss_pred hHHHHHHHHhhc-C---CEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccE--EeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI--VLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~-g---~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDi--vl~~~~l~~i~~~i~ 320 (456)
.|+.-++.|.+. | ..|+++|||.||.+||+.|+.||||+||.+.+|++||. |+.+++-+++..+|+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 588888888665 2 45999999999999999999999999999999999986 777888899988875
No 42
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.07 E-value=6.7e-10 Score=105.07 Aligned_cols=129 Identities=21% Similarity=0.266 Sum_probs=94.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccc-cCc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG-VFP 253 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~-~~P 253 (456)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+..- +.......+. .... .+... ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~~~---~~~~----------~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVEDG---KLTG----------LVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEECC---EEEE----------EecCcccCC
Confidence 5899999999999999999999999999999999999998631 1100000000 0000 00011 223
Q ss_pred hhHHHHHHHHhhcC----CEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHH
Q 012767 254 EHKYEIVKHLQARN----HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITA 318 (456)
Q Consensus 254 ~~K~~iV~~lq~~g----~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~ 318 (456)
..|..+++.+.++. ..|+|+||+.||.+|++.|+++++++ +.+..+.+||+++.+++|..+..+
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 44777777665542 35999999999999999999999984 568888999999999998887654
No 43
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.04 E-value=3.8e-10 Score=106.65 Aligned_cols=144 Identities=21% Similarity=0.252 Sum_probs=100.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccccC--C------chhh-------------
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSALSG--Q------DRDE------------- 231 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~--~~~~l~g--~------~~~~------------- 231 (456)
.+.+.+.++|++|++.|++++++||.....+..+.+.+++..... +...+.. . ....
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 478899999999999999999999999999999999999863211 0000000 0 0000
Q ss_pred -hhh-c------------CC---hHHHHhhcc-------cccccCc--hhHHHHHHHHhhc----CCEEEEecCCCCchh
Q 012767 232 -SIV-A------------LP---VDELIEKAD-------GFAGVFP--EHKYEIVKHLQAR----NHICGMIGNGVNDAP 281 (456)
Q Consensus 232 -~~~-~------------~~---~~~~~~~~~-------v~a~~~P--~~K~~iV~~lq~~----g~~v~~iGDG~ND~~ 281 (456)
... . .. ..+.+.... .+..++| ..|...++.+.+. ...++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 000 0 00 001111111 1123333 4788888887664 235999999999999
Q ss_pred hhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHH
Q 012767 282 ALKKADIGIAVADATDAARSAADIVLTEPGLNVIITA 318 (456)
Q Consensus 282 aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~ 318 (456)
|++.|++|+||+|+.+.+++.||+|...++-.++.++
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999999999999988888877664
No 44
>PRK10976 putative hydrolase; Provisional
Probab=99.03 E-value=1.2e-09 Score=106.56 Aligned_cols=66 Identities=18% Similarity=0.241 Sum_probs=57.1
Q ss_pred hHHHHHHHHhhc-C---CEEEEecCCCCchhhhhhcCeeEEeccccHHHhhccc--EEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD--IVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~-g---~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaD--ivl~~~~l~~i~~~i~ 320 (456)
.|...++.+.+. | ..|+++||+.||.+||+.|+.|+||+||.+.+|+.|| .|+.+++-+++..+|+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 477777777654 2 4599999999999999999999999999999999987 6777888889988875
No 45
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.03 E-value=1.2e-09 Score=97.97 Aligned_cols=105 Identities=26% Similarity=0.350 Sum_probs=83.0
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHH
Q 012767 183 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 262 (456)
Q Consensus 183 ~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~ 262 (456)
+|+.|++.|+++.|+||+....+..+.+.+|+.. .|... ..|.+.++.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~------------------------------~~~~~--~~k~~~~~~ 83 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH------------------------------LYQGQ--SNKLIAFSD 83 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE------------------------------EEecc--cchHHHHHH
Confidence 8999999999999999999999999999999852 11111 234444444
Q ss_pred Hhh----cCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchH-HHHHH
Q 012767 263 LQA----RNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV-IITAV 319 (456)
Q Consensus 263 lq~----~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~-i~~~i 319 (456)
+.+ ....|+|+||+.||.+|++.|+++++|.++.+..+..+++++..+.-.+ +.+++
T Consensus 84 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~ 145 (154)
T TIGR01670 84 ILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVC 145 (154)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHH
Confidence 433 3457999999999999999999999999999999999999998776444 44433
No 46
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.02 E-value=1.1e-09 Score=99.79 Aligned_cols=103 Identities=18% Similarity=0.256 Sum_probs=81.5
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccC--chhHHHH
Q 012767 182 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF--PEHKYEI 259 (456)
Q Consensus 182 ~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~--P~~K~~i 259 (456)
..|+.|++.|+++.++|+.....+..+.+.+|+.. +|.... |+--..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~------------------------------~f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR------------------------------FHEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE------------------------------EEecCCCCHHHHHHH
Confidence 57999999999999999999999999999999952 222222 2222334
Q ss_pred HHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchH
Q 012767 260 VKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV 314 (456)
Q Consensus 260 V~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~ 314 (456)
++.++-....|+++||+.||.+|++.|++++||+++.+.++..|++|+..++-.+
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g 145 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHG 145 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCC
Confidence 4444333456999999999999999999999999999999999999987655444
No 47
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.01 E-value=1.4e-09 Score=103.23 Aligned_cols=146 Identities=23% Similarity=0.278 Sum_probs=100.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccc-cCC--------chhh------------
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-SGQ--------DRDE------------ 231 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~--~~~~l-~g~--------~~~~------------ 231 (456)
.+.+.+.++|+++++.|+.++++||.+...+..+.+.+|+....+ +...+ ... ..+.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 477889999999999999999999999999999999999643111 00000 000 0000
Q ss_pred ---hhh-c-------------CC---hHHHHhhcc---------cccccCc--hhHHHHHHHHhhc----CCEEEEecCC
Q 012767 232 ---SIV-A-------------LP---VDELIEKAD---------GFAGVFP--EHKYEIVKHLQAR----NHICGMIGNG 276 (456)
Q Consensus 232 ---~~~-~-------------~~---~~~~~~~~~---------v~a~~~P--~~K~~iV~~lq~~----g~~v~~iGDG 276 (456)
... . .+ ..++..... .+..+.| ..|...++.+.++ ...|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 000 0 00 001111110 1223334 4688888877664 2469999999
Q ss_pred CCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchH----HHHHHH
Q 012767 277 VNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNV----IITAVL 320 (456)
Q Consensus 277 ~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~----i~~~i~ 320 (456)
.||.+|++.|++|+||+|+.+.+++.||.|..+++-.+ +..+++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999998888888 665554
No 48
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.94 E-value=5.5e-09 Score=99.67 Aligned_cols=147 Identities=18% Similarity=0.221 Sum_probs=102.0
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC--CCccc-cC-----------------------
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-SG----------------------- 226 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~--~~~~l-~g----------------------- 226 (456)
...+.+.+.++|+++++.|+++++.||+....+..+...+++..... +...+ ..
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 34577999999999999999999999999999999999999863110 00000 00
Q ss_pred -----------------Cc---hh-----------------hhhhcCC------------hHH----HHhhc--------
Q 012767 227 -----------------QD---RD-----------------ESIVALP------------VDE----LIEKA-------- 245 (456)
Q Consensus 227 -----------------~~---~~-----------------~~~~~~~------------~~~----~~~~~-------- 245 (456)
.. .. ......+ ... +-+..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 00 00 0000000 000 00010
Q ss_pred --ccccccCc--hhHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHH
Q 012767 246 --DGFAGVFP--EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIIT 317 (456)
Q Consensus 246 --~v~a~~~P--~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~ 317 (456)
..+-.++| ..|+..++.+.+. ...++++||+.||.+||+.|+.|+||+++++..+..||+++...+-.+|.+
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHH
Confidence 12234445 5699888888754 357999999999999999999999999999999999999998877788887
Q ss_pred HH
Q 012767 318 AV 319 (456)
Q Consensus 318 ~i 319 (456)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 64
No 49
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.93 E-value=2.8e-09 Score=100.62 Aligned_cols=115 Identities=23% Similarity=0.231 Sum_probs=86.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCc-----cccCCchhhhhhcCChHHHHhhcccc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSS-----ALSGQDRDESIVALPVDELIEKADGF 248 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~-----~l~g~~~~~~~~~~~~~~~~~~~~v~ 248 (456)
.+++|++.+.++.+++.|.+|+++||-....+..+++.+|+....-+.. .+.|. +.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~-------------------v~ 136 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGR-------------------VV 136 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEece-------------------ee
Confidence 5789999999999999999999999999999999999999975322111 12221 12
Q ss_pred c-ccCchhHHHHHHHHhhc-CC---EEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEee
Q 012767 249 A-GVFPEHKYEIVKHLQAR-NH---ICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLT 308 (456)
Q Consensus 249 a-~~~P~~K~~iV~~lq~~-g~---~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~ 308 (456)
. .+..+.|...++.+.+. |. .+.++|||.||.|||+.|+.+|++. +....+..|+....
T Consensus 137 g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n-~~~~l~~~a~~~~~ 200 (212)
T COG0560 137 GPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN-PKPKLRALADVRIW 200 (212)
T ss_pred eeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC-cCHHHHHHHHHhcC
Confidence 2 34457898888766654 44 4999999999999999999999995 34445555555443
No 50
>PLN02887 hydrolase family protein
Probab=98.89 E-value=1.5e-08 Score=108.74 Aligned_cols=66 Identities=24% Similarity=0.321 Sum_probs=57.2
Q ss_pred hHHHHHHHHhhcC----CEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQARN----HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~g----~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
.|+..++.|.+.- ..|+++|||.||.+||+.|+.||||+||.+.+|++||+|..+++-++|..+|+
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 4666666665542 35999999999999999999999999999999999999999999999998886
No 51
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.88 E-value=1.3e-08 Score=99.46 Aligned_cols=66 Identities=23% Similarity=0.333 Sum_probs=57.1
Q ss_pred hHHHHHHHHhhc-C---CEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~-g---~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
.|...++.+.++ | ..|+++||+.||.+|++.|++|++|+++.+..+..||+|+.+++-.++..+|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 477666666544 2 35999999999999999999999999999999999999999999999998876
No 52
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.84 E-value=1.2e-08 Score=94.22 Aligned_cols=110 Identities=25% Similarity=0.381 Sum_probs=84.3
Q ss_pred HHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHH
Q 012767 182 ETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVK 261 (456)
Q Consensus 182 ~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~ 261 (456)
..|+.|++.|+++.++||.....+..+++.+|+.. +|.. .+.|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~------------------------------~f~g--~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH------------------------------LYQG--QSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce------------------------------eecC--CCcHHHHHH
Confidence 68999999999999999999999999999999852 1221 234555555
Q ss_pred HHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCC----chHHHHHHHHHH
Q 012767 262 HLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPG----LNVIITAVLISR 323 (456)
Q Consensus 262 ~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~----l~~i~~~i~~~R 323 (456)
.+.++ ...|+||||+.||.+|++.|+++++++++.+..+..+|+++..++ +..+.+.+...|
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~ 172 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQ 172 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhc
Confidence 44332 346999999999999999999999999888888999999986444 344444444443
No 53
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.81 E-value=1.2e-08 Score=98.90 Aligned_cols=64 Identities=23% Similarity=0.287 Sum_probs=56.6
Q ss_pred hHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHH
Q 012767 255 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITA 318 (456)
Q Consensus 255 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~ 318 (456)
.|...++.+.+. ...++++||+.||++|++.|++|+||+++.+.+++.||+++.+++-.+|..+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 588888888765 2469999999999999999999999999999999999999988888887764
No 54
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=98.80 E-value=9.3e-09 Score=83.90 Aligned_cols=64 Identities=30% Similarity=0.381 Sum_probs=53.0
Q ss_pred CCChHHHHHHHhhcC------chhhhhcceEEEeecCCCCCceEEEEEEecCCcEEEEEcCcHHHHHhhcc
Q 012767 57 NLDVIDAAIVGMLAD------PKEARADIQEVHFLPFDPTGKRTALTYIDSEGKMHRVTKGSPEQILNLLH 121 (456)
Q Consensus 57 ~~~pi~~ai~~~~~~------~~~~~~~~~~~~~~pf~~~~k~~~v~~~~~~g~~~~~~KGa~e~Il~~~~ 121 (456)
..+|.|.||+.++.. ....+..+++++.+||+|.+|+|+++++ .++...+++|||||.|+++|+
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct 89 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCT 89 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcC
Confidence 457999999887643 2356788999999999999999999998 334566799999999999996
No 55
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.78 E-value=5.3e-08 Score=90.98 Aligned_cols=128 Identities=20% Similarity=0.230 Sum_probs=89.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++. +++.++|+.....+..+..++|+..-........++.. . ..+....|+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~---i------------~~~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGM---I------------TGYDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCe---E------------ECccccccc
Confidence 3679999999999999 99999999999999999999998521100000000000 0 001112467
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccE-EeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADI-VLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDi-vl~~~~l~~i~~~i~ 320 (456)
.|...++.++..+..++|+|||.||.+|.+.|++|+.++.........++. ++ +++..+...+.
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l~ 196 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAID 196 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHHH
Confidence 888899988888889999999999999999999999886543334445554 44 45666655444
No 56
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.76 E-value=1.5e-08 Score=88.73 Aligned_cols=114 Identities=24% Similarity=0.413 Sum_probs=91.7
Q ss_pred HHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHH
Q 012767 183 TIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKH 262 (456)
Q Consensus 183 ~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~ 262 (456)
.|+.|.++||+|-++||.+...+..-++.|||. .+|-. -++|....+.
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~------------------------------~~~qG--~~dK~~a~~~ 90 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK------------------------------HLYQG--ISDKLAAFEE 90 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc------------------------------eeeec--hHhHHHHHHH
Confidence 489999999999999999999999999999995 12222 2567766666
Q ss_pred Hhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCC----chHHHHHHHHHHHHHHH
Q 012767 263 LQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPG----LNVIITAVLISRAIFQR 328 (456)
Q Consensus 263 lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~----l~~i~~~i~~~R~i~~~ 328 (456)
|.++ ...|+++||..||.|+|++.++++|+.++.+..++.||+|+...+ +..+.++|..++..++-
T Consensus 91 L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~ 164 (170)
T COG1778 91 LLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDE 164 (170)
T ss_pred HHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHH
Confidence 6554 346999999999999999999999999999999999999998665 44456666666555443
No 57
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.73 E-value=8.5e-08 Score=93.14 Aligned_cols=66 Identities=18% Similarity=0.207 Sum_probs=54.1
Q ss_pred hHHHHHHHHhhc------CCEEEEecCCCCchhhhhhcCeeEEecccc---HHHhhc--c-cEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQAR------NHICGMIGNGVNDAPALKKADIGIAVADAT---DAARSA--A-DIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~------g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~---~~a~~a--a-Divl~~~~l~~i~~~i~ 320 (456)
.|...++.+.+. ...++++||+.||.+||+.|+.||||+|+. +..++. | ++|..+++-+++..+++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 566666666543 456999999999999999999999999987 467876 4 58888889999998876
No 58
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.73 E-value=4.7e-08 Score=90.78 Aligned_cols=117 Identities=25% Similarity=0.331 Sum_probs=82.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
+++|++.++++.|++.|+++.++|+-....+..+.+.+|+.. .+...+...+... . +-..+....|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~g~--~----------~p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFDEKGF--I----------QPDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEcCCCe--E----------ecceeeEEccc
Confidence 579999999999999999999999999999999999999752 1111111100000 0 00011123456
Q ss_pred hHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhccc
Q 012767 255 HKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD 304 (456)
Q Consensus 255 ~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaD 304 (456)
.|.++++.+.++ ...++|+||+.||.+|++.||++++++......+.|+|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 677777766544 34599999999999999999999999865555666665
No 59
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.62 E-value=3.8e-07 Score=89.40 Aligned_cols=67 Identities=21% Similarity=0.172 Sum_probs=53.6
Q ss_pred hhHHHHHHHHhh-------cCCEEEEecCCCCchhhhhhcCeeEEecccc-HH-----HhhcccEEeeCCCchHHHHHHH
Q 012767 254 EHKYEIVKHLQA-------RNHICGMIGNGVNDAPALKKADIGIAVADAT-DA-----ARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 254 ~~K~~iV~~lq~-------~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~-~~-----a~~aaDivl~~~~l~~i~~~i~ 320 (456)
.+|+..++.|.+ ....|+++||+.||.+||+.|++||||+++. +. .+..+|++....+-.++.++++
T Consensus 186 ~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 186 AGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 457777766654 3356999999999999999999999999654 21 3457899999999899988876
No 60
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.61 E-value=2.7e-07 Score=90.54 Aligned_cols=66 Identities=24% Similarity=0.327 Sum_probs=54.4
Q ss_pred hHHHHHHHHhh----cC-CEEEEecCCCCchhhhhhcCeeEEeccccHHHh----hcc-cEEe--eCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQA----RN-HICGMIGNGVNDAPALKKADIGIAVADATDAAR----SAA-DIVL--TEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~----~g-~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~----~aa-Divl--~~~~l~~i~~~i~ 320 (456)
.|...++.+.+ .. ..|+++||+.||.+|++.|++|++|+||.+.++ .+| +.+. ..++-.++..++.
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 67766766654 35 789999999999999999999999999999999 666 6666 5667888887775
No 61
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.55 E-value=4.7e-07 Score=85.60 Aligned_cols=111 Identities=16% Similarity=0.093 Sum_probs=77.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC-CccccCCchhhhhhcCChHHHHhhcccc--cc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP-SSALSGQDRDESIVALPVDELIEKADGF--AG 250 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~-~~~l~g~~~~~~~~~~~~~~~~~~~~v~--a~ 250 (456)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++....++. ...+.++..... .+.. ..+ ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~---~p~~------~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHID---WPHP------CDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEe---CCCC------Ccccccc
Confidence 36899999999999999999999999999888888888754332221 112222211100 0000 000 00
Q ss_pred cCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEec
Q 012767 251 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA 293 (456)
Q Consensus 251 ~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~ 293 (456)
-....|..+++.++.....++|+|||.||.+|++.||+.+|-+
T Consensus 140 ~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 140 QCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred CCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 1135799999998888888999999999999999999987754
No 62
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.52 E-value=2.3e-07 Score=84.06 Aligned_cols=109 Identities=20% Similarity=0.203 Sum_probs=75.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchh
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 255 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 255 (456)
+-|++++.+..|++.|.+|.++||.-...+..++.+|||+-.......+.-+..-+ ...++. --.-+...-
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk---~~gfd~------~~ptsdsgg 159 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGK---YLGFDT------NEPTSDSGG 159 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCc---cccccc------CCccccCCc
Confidence 56899999999999999999999999999999999999985322111111000000 000000 000112346
Q ss_pred HHHHHHHHhhc--CCEEEEecCCCCchhhhhhcCeeEEec
Q 012767 256 KYEIVKHLQAR--NHICGMIGNGVNDAPALKKADIGIAVA 293 (456)
Q Consensus 256 K~~iV~~lq~~--g~~v~~iGDG~ND~~aLk~AdvGIa~~ 293 (456)
|.+++..+++. ...++|||||.||.+|+..||.=|+.+
T Consensus 160 Ka~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 160 KAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred cHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 89999998875 456999999999999999977666654
No 63
>PLN02954 phosphoserine phosphatase
Probab=98.46 E-value=1.6e-06 Score=82.22 Aligned_cols=130 Identities=22% Similarity=0.297 Sum_probs=82.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC-CCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT-NMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++|++.++++.|++.|+++.++||.....+..+.+.+|+.. +.+...+....+. ...... .......+.
T Consensus 85 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g--~~~g~~--------~~~~~~~~~ 154 (224)
T PLN02954 85 LSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG--EYAGFD--------ENEPTSRSG 154 (224)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC--cEECcc--------CCCcccCCc
Confidence 68999999999999999999999999999999999999963 2221100000000 000000 000001224
Q ss_pred hHHHHHHHHhhc--CCEEEEecCCCCchhhhhh--cCeeEEeccc--cHHHhhcccEEeeCCCchHHHH
Q 012767 255 HKYEIVKHLQAR--NHICGMIGNGVNDAPALKK--ADIGIAVADA--TDAARSAADIVLTEPGLNVIIT 317 (456)
Q Consensus 255 ~K~~iV~~lq~~--g~~v~~iGDG~ND~~aLk~--AdvGIa~~~~--~~~a~~aaDivl~~~~l~~i~~ 317 (456)
.|.+.++.+.++ ...++|+||+.||..|.+. ++++++.+.. .+.....+|+++. ++..+..
T Consensus 155 ~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~ 221 (224)
T PLN02954 155 GKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIE 221 (224)
T ss_pred cHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHH
Confidence 577777776654 3569999999999999888 4555555532 2334556898884 4555544
No 64
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.41 E-value=6.3e-07 Score=82.46 Aligned_cols=92 Identities=24% Similarity=0.289 Sum_probs=68.4
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch-h-
Q 012767 178 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE-H- 255 (456)
Q Consensus 178 ~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~-~- 255 (456)
+++.+.|+.+++.|++++|+||+....+..+++.+|++........+.... ......+++|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~---------------~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNG---------------GGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTT---------------CCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecc---------------cceeeeeECCCCCC
Confidence 788899999999999999999999999999999999974211010010000 00123444444 4
Q ss_pred -HHHHHHHH------hhcCCEEEEecCCCCchhhhh
Q 012767 256 -KYEIVKHL------QARNHICGMIGNGVNDAPALK 284 (456)
Q Consensus 256 -K~~iV~~l------q~~g~~v~~iGDG~ND~~aLk 284 (456)
|...++.+ +.....++++|||.||.||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 445789999999999999986
No 65
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.35 E-value=2.1e-06 Score=81.44 Aligned_cols=109 Identities=17% Similarity=0.110 Sum_probs=74.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCC--CccccCCchhhhhhcCChHHHHhhccc-cccc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYP--SSALSGQDRDESIVALPVDELIEKADG-FAGV 251 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~--~~~l~g~~~~~~~~~~~~~~~~~~~~v-~a~~ 251 (456)
+++|++.++++.|++.|+++.++||-....+..+.+.+ +....+. ...+.|+.... ..+..+ .. +...
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~---~kp~p~-----~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITI---TWPHPC-----DEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEE---eccCCc-----ccccccc
Confidence 57999999999999999999999999999999999888 6431110 11122211100 000000 00 0000
Q ss_pred CchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEe
Q 012767 252 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 292 (456)
Q Consensus 252 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~ 292 (456)
....|..+++.++.....|+|+|||.||.+|.+.||+.++-
T Consensus 145 ~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~ 185 (219)
T PRK09552 145 CGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR 185 (219)
T ss_pred CCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH
Confidence 11348888998887777899999999999999999997773
No 66
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.33 E-value=1.1e-06 Score=79.79 Aligned_cols=98 Identities=18% Similarity=0.167 Sum_probs=69.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccc--cccCc
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF--AGVFP 253 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~--a~~~P 253 (456)
++|++.+.++.+++.|++++++||.....+..++..+|+..-.-+...+..+. .... .+. ....+
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g---~~~g----------~~~~~~~~~~ 140 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNG---LLTG----------PIEGQVNPEG 140 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCC---EEeC----------ccCCcccCCc
Confidence 58999999999999999999999999999999999999862111100010000 0000 000 12446
Q ss_pred hhHHHHHHHHhhc----CCEEEEecCCCCchhhhhhc
Q 012767 254 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKA 286 (456)
Q Consensus 254 ~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~A 286 (456)
..|..+++.+.+. ...++++|||.||.+|++.|
T Consensus 141 ~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 141 ECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred chHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 7899999887654 34699999999999999875
No 67
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.33 E-value=1.6e-06 Score=80.78 Aligned_cols=109 Identities=16% Similarity=0.127 Sum_probs=77.4
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccc-ccc
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGF-AGV 251 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~-a~~ 251 (456)
..+++|++.+.|+.+++.|++++++||.....+..+++.+|+.. .+......+.+ ..... .+. -.+
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~-~~~~~l~~~~~--g~~~g----------~~~~~~~ 151 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN-AIGTRLEESED--GIYTG----------NIDGNNC 151 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc-eEecceEEcCC--CEEeC----------CccCCCC
Confidence 34689999999999999999999999999999999999999853 11111110000 00000 000 123
Q ss_pred CchhHHHHHHHHhhc-C---CEEEEecCCCCchhhhhhcCeeEEecc
Q 012767 252 FPEHKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVAD 294 (456)
Q Consensus 252 ~P~~K~~iV~~lq~~-g---~~v~~iGDG~ND~~aLk~AdvGIa~~~ 294 (456)
.++.|...++.+.++ + ..+.++||+.+|.||++.|+.++++..
T Consensus 152 ~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred CChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 467788877766543 3 368999999999999999999999863
No 68
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.32 E-value=2.1e-06 Score=78.70 Aligned_cols=114 Identities=16% Similarity=0.066 Sum_probs=75.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhccccc-ccC
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA-GVF 252 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a-~~~ 252 (456)
-+++|++.+.++.|++.|+++.++|+........+.+..|+.... ..++.....-+. .+. ..-...++..+. ...
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~~~~-~g~-~~~~~~~~~~~~~~~~ 146 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIYSNPASFDN-DGR-HIVWPHHCHGCCSCPC 146 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEeccCceECC-CCc-EEEecCCCCccCcCCC
Confidence 368899999999999999999999999999999999998885321 111111100000 000 000000001111 112
Q ss_pred chhHHHHHHHHhhc-CCEEEEecCCCCchhhhhhcCeeEE
Q 012767 253 PEHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGIA 291 (456)
Q Consensus 253 P~~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~AdvGIa 291 (456)
...|.++++.++.+ ...++++|||.||..|.+.||+-.|
T Consensus 147 g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 147 GCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 23589999999887 8899999999999999999987654
No 69
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.28 E-value=8.5e-06 Score=77.06 Aligned_cols=126 Identities=16% Similarity=0.208 Sum_probs=88.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
-++.|++.+.++.|++.|+++.++||........+.+.+|+... + ..++.++. +....|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~-f-~~~~~~~~-------------------~~~~kp 150 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADY-F-SVVIGGDS-------------------LPNKKP 150 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccC-c-cEEEcCCC-------------------CCCCCc
Confidence 45789999999999999999999999999999899999998532 1 11111110 111222
Q ss_pred --hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCe-eEEecc----ccHHHhhcccEEeeCCCchHHHHHHHHH
Q 012767 254 --EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVAD----ATDAARSAADIVLTEPGLNVIITAVLIS 322 (456)
Q Consensus 254 --~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv-GIa~~~----~~~~a~~aaDivl~~~~l~~i~~~i~~~ 322 (456)
+--..+++.++.....++++||+.||+.+.+.||+ +|.+.. ..+.....+++++ +++..+..++.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 22234555555556679999999999999999999 666542 2334445688877 6688888777643
No 70
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.26 E-value=4.2e-06 Score=80.94 Aligned_cols=147 Identities=17% Similarity=0.128 Sum_probs=97.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC----CCc-cccCC-c-hhh---------------
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY----PSS-ALSGQ-D-RDE--------------- 231 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~----~~~-~l~g~-~-~~~--------------- 231 (456)
.+..|...++++++++.|+.++++||.....+..+.+++++....+ +.. ++.+. . .+.
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 4566889999999999999999999999999999999888754210 111 00000 0 000
Q ss_pred --hhh---cC--------------------C----h---HHHHhhc--cc--------ccccCc--hhHHHHHHHHhhc-
Q 012767 232 --SIV---AL--------------------P----V---DELIEKA--DG--------FAGVFP--EHKYEIVKHLQAR- 266 (456)
Q Consensus 232 --~~~---~~--------------------~----~---~~~~~~~--~v--------~a~~~P--~~K~~iV~~lq~~- 266 (456)
... .. . . .+.+... .+ +-.+.| ..|...++.+.+.
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 000 00 0 0 0011110 00 113344 4688888888664
Q ss_pred ---CCEEEEecCCCCchhhhhh-cCeeEEeccccHHHhhccc-------EEeeCCCchHHHHHHH
Q 012767 267 ---NHICGMIGNGVNDAPALKK-ADIGIAVADATDAARSAAD-------IVLTEPGLNVIITAVL 320 (456)
Q Consensus 267 ---g~~v~~iGDG~ND~~aLk~-AdvGIa~~~~~~~a~~aaD-------ivl~~~~l~~i~~~i~ 320 (456)
...|+++||+.||.+|++. ++.|++|+|+.+..++.++ ++....+-+++.+++.
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3569999999999999998 6799999999998887543 5565666788887775
No 71
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.16 E-value=1.7e-05 Score=75.26 Aligned_cols=126 Identities=19% Similarity=0.217 Sum_probs=90.1
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccC
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 252 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~ 252 (456)
...+-|++++++..|+++|++..++|++....+..+.+..|+..-.. .++.++.. ....-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~--~i~g~~~~-----------------~~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD--VIVGGDDV-----------------PPPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc--eEEcCCCC-----------------CCCCcC
Confidence 34578999999999999999999999999999999999999864211 11111100 112234
Q ss_pred chhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcC---eeEEecc--ccHHHhhcccEEeeCCCchHHHHHH
Q 012767 253 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKAD---IGIAVAD--ATDAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 253 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Ad---vGIa~~~--~~~~a~~aaDivl~~~~l~~i~~~i 319 (456)
|.....+++.+......++||||..+|+.|-++|+ ||+..+. ........+|+++. ++..+...+
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~el~~~l 217 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAELLALL 217 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHHHHHHH
Confidence 55555666666655457999999999999999998 5566653 34566667899984 466666554
No 72
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.10 E-value=1.9e-05 Score=73.78 Aligned_cols=124 Identities=16% Similarity=0.193 Sum_probs=82.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+....+.+|+..-. ..++..++. ....-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF--DHVIGSDEV-----------------PRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe--eeEEecCcC-----------------CCCCCChH
Confidence 57899999999999999999999999998888888889885311 011111000 01111222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEE-ec----cccHHHhhcccEEeeCCCchHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VA----DATDAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa-~~----~~~~~a~~aaDivl~~~~l~~i~~~i 319 (456)
-=..+++.++-....++||||+.+|+.+-+++++... +. ...+.....+|+++ +++..+..++
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 2234445555445679999999999999999998643 22 22234456788887 4466555443
No 73
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.07 E-value=6e-06 Score=79.15 Aligned_cols=68 Identities=16% Similarity=0.173 Sum_probs=58.9
Q ss_pred hhHHHHHHHHhhc-C---CEEEEecCCCCchhhhhhcCeeEEeccccHHHhhccc----EEeeCCCchHHHHHHHH
Q 012767 254 EHKYEIVKHLQAR-N---HICGMIGNGVNDAPALKKADIGIAVADATDAARSAAD----IVLTEPGLNVIITAVLI 321 (456)
Q Consensus 254 ~~K~~iV~~lq~~-g---~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaD----ivl~~~~l~~i~~~i~~ 321 (456)
..|...++.+.++ | ..|+++||+.||.+|++.++.||+|+++.+..+..|| +|...++-.++.++|.+
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 4788888888765 2 2589999999999999999999999999999999999 78777888889888863
No 74
>PLN02382 probable sucrose-phosphatase
Probab=98.04 E-value=2.5e-05 Score=81.15 Aligned_cols=71 Identities=24% Similarity=0.237 Sum_probs=55.6
Q ss_pred ccCch--hHHHHHHHHhhc-------CCEEEEecCCCCchhhhhhcC-eeEEeccccHHHhhcc--------cEEee-CC
Q 012767 250 GVFPE--HKYEIVKHLQAR-------NHICGMIGNGVNDAPALKKAD-IGIAVADATDAARSAA--------DIVLT-EP 310 (456)
Q Consensus 250 ~~~P~--~K~~iV~~lq~~-------g~~v~~iGDG~ND~~aLk~Ad-vGIa~~~~~~~a~~aa--------Divl~-~~ 310 (456)
++.|. .|...++.|.++ ...|+++||+.||.+||+.++ .||+|+|+.+..++.+ +++.. ++
T Consensus 168 dI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~ 247 (413)
T PLN02382 168 DVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATER 247 (413)
T ss_pred EEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCC
Confidence 44553 599888888665 236899999999999999999 6999999999998743 55533 55
Q ss_pred CchHHHHHHH
Q 012767 311 GLNVIITAVL 320 (456)
Q Consensus 311 ~l~~i~~~i~ 320 (456)
+-.+|.++|.
T Consensus 248 ~~~GI~~al~ 257 (413)
T PLN02382 248 CAAGIIQAIG 257 (413)
T ss_pred CccHHHHHHH
Confidence 6778888776
No 75
>PRK08238 hypothetical protein; Validated
Probab=97.99 E-value=0.00012 Score=77.40 Aligned_cols=98 Identities=15% Similarity=0.177 Sum_probs=74.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
|++|++.+.++++++.|+++.++|+-+...+..+++.+|+.+. ++.+++ ..++.|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~-----Vigsd~-------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG-----VFASDG-------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-----EEeCCC-------------------ccccCCc
Confidence 4789999999999999999999999999999999999997321 111110 1245667
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATD 297 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~ 297 (456)
.|.+.++..... +.+.++||..||.++++.|+-+++++.+..
T Consensus 128 ~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~ 169 (479)
T PRK08238 128 AKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPG 169 (479)
T ss_pred hHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHH
Confidence 776655433222 226789999999999999999999985443
No 76
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.99 E-value=2.1e-05 Score=67.08 Aligned_cols=118 Identities=14% Similarity=0.064 Sum_probs=73.1
Q ss_pred ccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccc
Q 012767 171 PLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 250 (456)
Q Consensus 171 ~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~ 250 (456)
....++.+++.+.++.|++.|++++++||.....+....+.+|+... ...++............ ..........+..
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIYYPKE-GLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhhcccc-cccccccccccCC
Confidence 34568899999999999999999999999999999999999987421 11111110000000000 0000000011223
Q ss_pred cCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhh-cCeeEE
Q 012767 251 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKK-ADIGIA 291 (456)
Q Consensus 251 ~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~-AdvGIa 291 (456)
-.|+.+..+.+.+......++++||+.+|..|++. ..-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 34444555666665556779999999999999998 444443
No 77
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.89 E-value=7.7e-05 Score=70.19 Aligned_cols=123 Identities=18% Similarity=0.184 Sum_probs=81.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchh
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 255 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 255 (456)
+.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+++.. ...-.|+-
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f--~~i~~~~~~~-----------------~~Kp~p~~ 143 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF--DVVITLDDVE-----------------HAKPDPEP 143 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce--eEEEecCcCC-----------------CCCCCcHH
Confidence 6799999999999999999999999999999888999985321 1111111000 01122232
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEE-e--cc-ccH-HHhhcccEEeeCCCchHHHHHH
Q 012767 256 KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-V--AD-ATD-AARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 256 K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa-~--~~-~~~-~a~~aaDivl~~~~l~~i~~~i 319 (456)
-..+++.+......++||||+.+|+.|-++|++-.. + +. ..+ .....+|+++ +++..+..++
T Consensus 144 ~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 144 VLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 234445554445679999999999999999998533 2 21 122 2344688877 4577776654
No 78
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.89 E-value=7.1e-05 Score=70.09 Aligned_cols=122 Identities=15% Similarity=0.153 Sum_probs=79.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.... ..++.+++.. ...-.|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~p~ 145 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF--SVLIGGDSLA-----------------QRKPHPD 145 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC--cEEEecCCCC-----------------CCCCChH
Confidence 57899999999999999999999999999999999999985321 1111111000 0111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEec---cc--cHHHhhcccEEeeCCCchHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA---DA--TDAARSAADIVLTEPGLNVIIT 317 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~---~~--~~~a~~aaDivl~~~~l~~i~~ 317 (456)
-=..+.+.+......++|+||+.+|+.+.++|++....- .. .......+|+++. ++..+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~--~~~~l~~ 211 (213)
T TIGR01449 146 PLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD--SLNELPP 211 (213)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC--CHHHHHh
Confidence 123334444444566999999999999999999875532 11 1222346888773 4555443
No 79
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.87 E-value=5.3e-05 Score=72.27 Aligned_cols=44 Identities=14% Similarity=0.140 Sum_probs=38.7
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 216 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~ 216 (456)
.+..-+.+.++|++|++.|++++++||.....+..+.+++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 34555679999999999999999999999999999999999853
No 80
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.87 E-value=0.0001 Score=72.45 Aligned_cols=125 Identities=14% Similarity=0.162 Sum_probs=80.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
.++.|++.++++.|++.|+++.++|+.....+..+....|+.... ..++.+++.. ...-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--~~i~~~d~~~-----------------~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--RWIIGGDTLP-----------------QKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--eEEEecCCCC-----------------CCCCCc
Confidence 467899999999999999999999999988888888888875211 1111111000 001111
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCe-eEEecc----ccHHHhhcccEEeeCCCchHHHHHH
Q 012767 254 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAVAD----ATDAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 254 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv-GIa~~~----~~~~a~~aaDivl~~~~l~~i~~~i 319 (456)
+-=..+++.+.-....++||||+.||+.+.+.|++ .+++.. ..+.....+|.++ +++..+..++
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~ 229 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGC 229 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHH
Confidence 11123333333335679999999999999999997 344432 2223445788888 4566665443
No 81
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.81 E-value=0.00016 Score=70.78 Aligned_cols=140 Identities=9% Similarity=0.098 Sum_probs=84.9
Q ss_pred CCCcchHHHHHHHHh-CCCeEEEEcCCcHHHHHHHHHHhCCCC---C---CC--CCc----cccCCchh-------hhh-
Q 012767 175 PPIHDSAETIRRALS-LGLGVKMITGDQLAIAKETGRRLGMGT---N---MY--PSS----ALSGQDRD-------ESI- 233 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~-~Gi~v~miTGD~~~~a~~ia~~lGi~~---~---~~--~~~----~l~g~~~~-------~~~- 233 (456)
.+-+++.++|+.|++ .|+.|+++||+.......+.+.+++.- + .. ... .+..+... +..
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 455789999999997 799999999999999888877665320 0 00 000 00000000 000
Q ss_pred ------------------hcC--C---hH----HHHhhcc--------cccccCc--hhHHHHHHHHhhc----CCEEEE
Q 012767 234 ------------------VAL--P---VD----ELIEKAD--------GFAGVFP--EHKYEIVKHLQAR----NHICGM 272 (456)
Q Consensus 234 ------------------~~~--~---~~----~~~~~~~--------v~a~~~P--~~K~~iV~~lq~~----g~~v~~ 272 (456)
... + .. .+..... .+.++.| .+|...++.+.+. ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 000 0 00 1111111 1223334 3788888877654 356999
Q ss_pred ecCCCCchhhhhhc----CeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 273 IGNGVNDAPALKKA----DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 273 iGDG~ND~~aLk~A----dvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
+||+.||.+||+.+ +.||+||++. ..|++.|. +...+...+.
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~--~~~~v~~~L~ 241 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLA--GVPDVWSWLE 241 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCC--CHHHHHHHHH
Confidence 99999999999999 9999999864 45677775 4555554443
No 82
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.75 E-value=0.00014 Score=68.99 Aligned_cols=122 Identities=16% Similarity=0.217 Sum_probs=77.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
-++.|++.++++.|++.|+++.++|+........+.+.+|+..-. ..++.+++. ....-.|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~Kp~~ 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASAEKL-----------------PYSKPHP 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEcccC-----------------CCCCCCH
Confidence 357899999999999999999999999999999999999985321 111111100 0111112
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEec-cc---cHHHhhcccEEeeCCCchHHH
Q 012767 254 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DA---TDAARSAADIVLTEPGLNVII 316 (456)
Q Consensus 254 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~-~~---~~~a~~aaDivl~~~~l~~i~ 316 (456)
+-=..+.+.+.-....|+|+||..||+.+-+.||+....- .+ .+.-...+|+++. ++..+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~dl~ 216 (222)
T PRK10826 152 EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE--SLTELT 216 (222)
T ss_pred HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc--CHHHHh
Confidence 2112223333333456999999999999999999876543 21 1122235677763 355543
No 83
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.72 E-value=0.00016 Score=68.47 Aligned_cols=38 Identities=21% Similarity=0.238 Sum_probs=35.5
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 012767 178 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 215 (456)
Q Consensus 178 ~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~ 215 (456)
+.++++|+.|++.|++++++||.....+..+.+.+|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44899999999999999999999999999999999986
No 84
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.69 E-value=0.00025 Score=66.96 Aligned_cols=125 Identities=18% Similarity=0.159 Sum_probs=79.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
.++.||+.+.++.|++.|+++.++|+-.......+.+.+|+....+-..++.+.+.. ...-.|
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~-----------------~~KP~p 148 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA-----------------AGRPAP 148 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC-----------------CCCCCH
Confidence 368999999999999999999999999999999999999985211111222221100 011112
Q ss_pred hhHHHHHHHHhhc-CCEEEEecCCCCchhhhhhcCeeE--Eeccc--c-H-HHhhcccEEeeCCCchHHHH
Q 012767 254 EHKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIGI--AVADA--T-D-AARSAADIVLTEPGLNVIIT 317 (456)
Q Consensus 254 ~~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~AdvGI--a~~~~--~-~-~a~~aaDivl~~~~l~~i~~ 317 (456)
+-=...++.+.-. ...++||||+.+|+.+-+.|++.. ++..+ + . .....+|.++ +++..+..
T Consensus 149 ~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~ 217 (220)
T TIGR03351 149 DLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPA 217 (220)
T ss_pred HHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHH
Confidence 2112233333333 357999999999999999999986 33322 1 1 1234567776 34555544
No 85
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.68 E-value=0.00032 Score=74.24 Aligned_cols=131 Identities=21% Similarity=0.212 Sum_probs=96.6
Q ss_pred CceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCcccc-----------------
Q 012767 163 PWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALS----------------- 225 (456)
Q Consensus 163 ~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~----------------- 225 (456)
+-.|.|++.+.-+++++....|+.|-++-|+.+..+-.+....+-.|.++||.....+...+.
T Consensus 814 GQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~ 893 (1354)
T KOG4383|consen 814 GQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQF 893 (1354)
T ss_pred cchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhh
Confidence 457999999999999999999999999999999999999999999999999976221110000
Q ss_pred -C-------------------Cchhhh------hhc----------C--------------------ChHHHHhhccccc
Q 012767 226 -G-------------------QDRDES------IVA----------L--------------------PVDELIEKADGFA 249 (456)
Q Consensus 226 -g-------------------~~~~~~------~~~----------~--------------------~~~~~~~~~~v~a 249 (456)
+ ...++. ... . ++|.+-.....|.
T Consensus 894 a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFT 973 (1354)
T KOG4383|consen 894 AAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFT 973 (1354)
T ss_pred hccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeecc
Confidence 0 000000 000 0 0111111222689
Q ss_pred ccCchhHHHHHHHHhhcCCEEEEecCCCCch--hhhhhcCeeEEec
Q 012767 250 GVFPEHKYEIVKHLQARNHICGMIGNGVNDA--PALKKADIGIAVA 293 (456)
Q Consensus 250 ~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~--~aLk~AdvGIa~~ 293 (456)
+++|+.-.++|+.+|+.|.+|+.+|...|-. ..+.+|||+|++.
T Consensus 974 DcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD 1019 (1354)
T KOG4383|consen 974 DCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALD 1019 (1354)
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEec
Confidence 9999999999999999999999999998865 4568999999986
No 86
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.65 E-value=0.00028 Score=67.36 Aligned_cols=124 Identities=13% Similarity=0.113 Sum_probs=81.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+..+-+.+|+.... ..++.+++. ....-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~~-----------------~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC--AVLIGGDTL-----------------AERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc--cEEEecCcC-----------------CCCCCCHH
Confidence 47899999999999999999999999988888888888875321 111111100 01122232
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEE-ecc----cc-HHHhhcccEEeeCCCchHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VAD----AT-DAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa-~~~----~~-~~a~~aaDivl~~~~l~~i~~~i 319 (456)
-=..+++.+.-....++||||+.||+.|-+.|++... +.. .. ......+|+++. ++..+...+
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~~ 224 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLWNPA 224 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHHHHh
Confidence 2334555665556779999999999999999998743 321 11 122346888884 465555443
No 87
>PRK11590 hypothetical protein; Provisional
Probab=97.63 E-value=0.00028 Score=66.49 Aligned_cols=105 Identities=12% Similarity=0.014 Sum_probs=74.4
Q ss_pred CCCcchHHHH-HHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC--CCCCCCccccCCchhhhhhcCChHHHHhhccccccc
Q 012767 175 PPIHDSAETI-RRALSLGLGVKMITGDQLAIAKETGRRLGMG--TNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 251 (456)
Q Consensus 175 ~~r~~~~~~I-~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~--~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~ 251 (456)
.+.|++.+.| +.+++.|++++++|+-....+..+++.+|+. .+.+ +.+.+....+ + -.-..|
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i------~t~l~~~~tg--------~-~~g~~c 159 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLI------ASQMQRRYGG--------W-VLTLRC 159 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceE------EEEEEEEEcc--------E-ECCccC
Confidence 3589999999 5788899999999999999999999999962 2211 1111100000 0 001246
Q ss_pred CchhHHHHHHHH-hhcCCEEEEecCCCCchhhhhhcCeeEEecc
Q 012767 252 FPEHKYEIVKHL-QARNHICGMIGNGVNDAPALKKADIGIAVAD 294 (456)
Q Consensus 252 ~P~~K~~iV~~l-q~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~ 294 (456)
..+.|..-++.. ......+.+-||+.||.|||+.|+-+++++.
T Consensus 160 ~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 160 LGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred CChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 678888777654 3344566788999999999999999999963
No 88
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.59 E-value=0.00023 Score=69.78 Aligned_cols=42 Identities=7% Similarity=0.018 Sum_probs=38.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 216 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~ 216 (456)
..-+.+.++|++|++.||.|++.||........+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 355678999999999999999999999999999999999864
No 89
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.58 E-value=0.00079 Score=65.90 Aligned_cols=127 Identities=11% Similarity=0.065 Sum_probs=81.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCC----------CCccccCCchhhhhhcCChHHHHh
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMY----------PSSALSGQDRDESIVALPVDELIE 243 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~----------~~~~l~g~~~~~~~~~~~~~~~~~ 243 (456)
-++|||+.+.++.|++.|+++.++||-....+..+.+++|+..... ...++.|.. .
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~-~------------- 185 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK-G------------- 185 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC-C-------------
Confidence 4689999999999999999999999999999999999999852211 011111110 0
Q ss_pred hcccccccCchhHHHHHH-----HHh--hcCCEEEEecCCCCchhhhhhc---CeeEEec--cc-----cHHHhhcccEE
Q 012767 244 KADGFAGVFPEHKYEIVK-----HLQ--ARNHICGMIGNGVNDAPALKKA---DIGIAVA--DA-----TDAARSAADIV 306 (456)
Q Consensus 244 ~~~v~a~~~P~~K~~iV~-----~lq--~~g~~v~~iGDG~ND~~aLk~A---dvGIa~~--~~-----~~~a~~aaDiv 306 (456)
--+....|.+.+. .+. .....|+++|||.||+.|..-. .--+.+| +. -+.-.++=|||
T Consensus 186 -----P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Div 260 (277)
T TIGR01544 186 -----PLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIV 260 (277)
T ss_pred -----CcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEE
Confidence 0011134554433 222 2346799999999999996544 2233444 32 23346788999
Q ss_pred eeCCCchHHHHHH
Q 012767 307 LTEPGLNVIITAV 319 (456)
Q Consensus 307 l~~~~l~~i~~~i 319 (456)
|.++.=-.++..|
T Consensus 261 l~~D~t~~v~~~i 273 (277)
T TIGR01544 261 LVQDETLEVANSI 273 (277)
T ss_pred EECCCCchHHHHH
Confidence 9877644444444
No 90
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.50 E-value=0.00089 Score=65.40 Aligned_cols=96 Identities=14% Similarity=0.071 Sum_probs=63.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++-|++.++++.|++.|+++.++||.....+..+-+.+|+..-.. ..++.+++. ....-.|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~-d~i~~~~~~-----------------~~~KP~p~ 162 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP-DHVVTTDDV-----------------PAGRPYPW 162 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc-eEEEcCCcC-----------------CCCCCChH
Confidence 467899999999999999999999999988887777777643211 112221110 01111122
Q ss_pred hHHHHHHHHhhc-CCEEEEecCCCCchhhhhhcCe
Q 012767 255 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADI 288 (456)
Q Consensus 255 ~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~Adv 288 (456)
-=....+.+.-. ...++||||+.+|+.+-+.|++
T Consensus 163 ~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 163 MALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred HHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 222333444332 3569999999999999999997
No 91
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.47 E-value=0.0011 Score=64.12 Aligned_cols=97 Identities=15% Similarity=0.114 Sum_probs=66.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+..+-+.+|+..... ..++.+++.. ...-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~-d~ii~~~~~~-----------------~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP-DYNVTTDDVP-----------------AGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC-ceEEccccCC-----------------CCCCCHH
Confidence 467899999999999999999999999999998888888864211 1222221100 1111222
Q ss_pred hHHHHHHHHhhc-CCEEEEecCCCCchhhhhhcCee
Q 012767 255 HKYEIVKHLQAR-NHICGMIGNGVNDAPALKKADIG 289 (456)
Q Consensus 255 ~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~AdvG 289 (456)
-=...++.+.-. ...++||||..+|+.+-+.|++-
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 223334444432 44699999999999999999965
No 92
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.46 E-value=0.00098 Score=65.52 Aligned_cols=121 Identities=12% Similarity=0.084 Sum_probs=79.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+..+-+.+|+..... .++.++. +. ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~--~vi~~~~------------------~~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS--VVQAGTP------------------IL--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE--EEEecCC------------------CC--CCHH
Confidence 567999999999999999999999999999999999999853211 1111110 00 0011
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEe-cc--ccH--HHhhcccEEeeCCCchHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV-AD--ATD--AARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~-~~--~~~--~a~~aaDivl~~~~l~~i~~~i 319 (456)
-=..+++.+.-....++||||+.+|+.+-+.|++-... .. .+. .....+|+++ +++..+..++
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 11122233333345699999999999999999986432 22 122 2234688887 5577776654
No 93
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.45 E-value=0.0009 Score=65.30 Aligned_cols=116 Identities=18% Similarity=0.095 Sum_probs=76.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+..+-..+|+..- -..++.+++.. ...-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~--Fd~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF--FSVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh--CcEEEecccCC-----------------CCCCCHH
Confidence 4689999999999999999999999999999999999998531 11222221110 0111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeE-Eec-cccHHHhhcccEEeeC
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI-AVA-DATDAARSAADIVLTE 309 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI-a~~-~~~~~a~~aaDivl~~ 309 (456)
-=...++.+.-....++||||..+|+.|-+.|++-. ++. ..+......+|+++.+
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~ 226 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR 226 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC
Confidence 223344455444567999999999999999999843 332 2222233457887744
No 94
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.42 E-value=0.0011 Score=64.07 Aligned_cols=117 Identities=12% Similarity=0.141 Sum_probs=78.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+-....+...-+.+|+..-. ..++.+++.. ...-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F--d~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF--QAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC--cEEEecCcCC-----------------CCCCChH
Confidence 46789999999999999999999999999999999999985321 1222222110 1122222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEE-eccc-c-H-HHhhcccEEeeCC
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VADA-T-D-AARSAADIVLTEP 310 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa-~~~~-~-~-~a~~aaDivl~~~ 310 (456)
--..+.+.+.-....++||||..+|+.+-++|++-.. +..+ . + .....+|+++.+.
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~ 228 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDY 228 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccc
Confidence 2334455555455679999999999999999998643 2221 1 1 2234688888553
No 95
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.40 E-value=0.00071 Score=63.86 Aligned_cols=106 Identities=11% Similarity=0.038 Sum_probs=73.0
Q ss_pred CCCcchHHHHH-HHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 175 PPIHDSAETIR-RALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 175 ~~r~~~~~~I~-~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
.++|++.++|+ .+++.|++++++|+-....+..+++..++.... .++ |.+.... .. .. -.-..|.-
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~---~~i-~t~le~~-~g---g~-----~~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL---NLI-ASQIERG-NG---GW-----VLPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC---cEE-EEEeEEe-CC---ce-----EcCccCCC
Confidence 46899999996 788899999999999999999999986652210 011 1111100 00 00 01124666
Q ss_pred hhHHHHHHHH-hhcCCEEEEecCCCCchhhhhhcCeeEEec
Q 012767 254 EHKYEIVKHL-QARNHICGMIGNGVNDAPALKKADIGIAVA 293 (456)
Q Consensus 254 ~~K~~iV~~l-q~~g~~v~~iGDG~ND~~aLk~AdvGIa~~ 293 (456)
++|..-++.. ......+.+-||+.||.|||+.||.+++++
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 8888777644 323345678899999999999999999996
No 96
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.40 E-value=0.001 Score=70.33 Aligned_cols=124 Identities=11% Similarity=0.055 Sum_probs=81.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.||+.++++.|++.|+++.++|+.....+..+.+.+|+..-. ..++.+++. ...-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~v------------------~~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQI------------------NSLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCCC------------------CCCCCcH
Confidence 67899999999999999999999999999999999999985321 112222110 0011222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee-EEecc--ccHHHhhcccEEeeCCCchHHHHHHHHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVAD--ATDAARSAADIVLTEPGLNVIITAVLIS 322 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~~--~~~~a~~aaDivl~~~~l~~i~~~i~~~ 322 (456)
-=...++.++ ...++|+||+.+|+.+-+.|++- |++.. ..+.....+|+++ +++..+..++...
T Consensus 390 ~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~~ 456 (459)
T PRK06698 390 LVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILSTV 456 (459)
T ss_pred HHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHHH
Confidence 1112222222 35699999999999999999974 44432 2222234578887 4577777666543
No 97
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.40 E-value=0.00095 Score=62.32 Aligned_cols=144 Identities=22% Similarity=0.305 Sum_probs=94.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCC-------ccccCCchhhhh------hcCChHHHH
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS-------SALSGQDRDESI------VALPVDELI 242 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~-------~~l~g~~~~~~~------~~~~~~~~~ 242 (456)
+-|++.++.+.|++. ...+++|--...-+..+|..+|++...... ..+...+..+.+ ...+-+++.
T Consensus 84 lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geelf 162 (315)
T COG4030 84 LVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEELF 162 (315)
T ss_pred cCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHHH
Confidence 568999999998765 445555666777889999999996422111 111111111111 112233444
Q ss_pred hhcc-cccccCchhHHHHHHHHhhc------------------CCEEEEecCCCCchhhhhhcC-ee-EEec-cccHHHh
Q 012767 243 EKAD-GFAGVFPEHKYEIVKHLQAR------------------NHICGMIGNGVNDAPALKKAD-IG-IAVA-DATDAAR 300 (456)
Q Consensus 243 ~~~~-v~a~~~P~~K~~iV~~lq~~------------------g~~v~~iGDG~ND~~aLk~Ad-vG-Ia~~-~~~~~a~ 300 (456)
++.+ +|.+..|..-.+|+..++.- ....+++||++.|+.||+.+. -| +|++ ||.+-|.
T Consensus 163 e~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYal 242 (315)
T COG4030 163 EKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYAL 242 (315)
T ss_pred HHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcccc
Confidence 4332 68888887666665555432 123688999999999999883 33 6666 8888888
Q ss_pred hcccEEeeCCCchHHHHHHH
Q 012767 301 SAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 301 ~aaDivl~~~~l~~i~~~i~ 320 (456)
..||+.+.+++...+..+|.
T Consensus 243 ~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 243 KEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccceEEeccchhhhhHHHH
Confidence 88999999999988888776
No 98
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.36 E-value=0.0016 Score=72.68 Aligned_cols=61 Identities=18% Similarity=0.183 Sum_probs=47.2
Q ss_pred hhHHHHHHHHhhc--CCEEEEecCCCCchhhhhhc---CeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 254 EHKYEIVKHLQAR--NHICGMIGNGVNDAPALKKA---DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 254 ~~K~~iV~~lq~~--g~~v~~iGDG~ND~~aLk~A---dvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
-+|+..++.+.+. ...++++||+.||.+||+.+ +.+|+||++ ..+|++++.++ ..+..++.
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCH--HHHHHHHH
Confidence 4799999888764 34799999999999999986 688888874 57888988754 44555443
No 99
>PRK11587 putative phosphatase; Provisional
Probab=97.28 E-value=0.0016 Score=61.52 Aligned_cols=115 Identities=13% Similarity=0.137 Sum_probs=73.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+.....+...-...|+.. + ..++.+++. ....-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~--~-~~i~~~~~~-----------------~~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA--P-EVFVTAERV-----------------KRGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC--c-cEEEEHHHh-----------------cCCCCCcH
Confidence 468999999999999999999999988776666666677631 1 112211100 01112222
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee-EEecccc-HHHhhcccEEeeC
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADAT-DAARSAADIVLTE 309 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~~~~-~~a~~aaDivl~~ 309 (456)
-=....+.+.-....++||||..+|+.+-+.|++. |++..+. ......+|+++.+
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecc
Confidence 22334444544457799999999999999999984 5554332 2223457777643
No 100
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.23 E-value=0.0011 Score=61.74 Aligned_cols=39 Identities=28% Similarity=0.342 Sum_probs=35.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhC
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG 213 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lG 213 (456)
++.+.+.++|++|++.|++++++||.....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 467899999999999999999999999999998888754
No 101
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.20 E-value=0.00063 Score=63.19 Aligned_cols=94 Identities=19% Similarity=0.137 Sum_probs=65.8
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccC
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 252 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~ 252 (456)
.+++.+++.++++.|++.|+++.++||.....+..+.+.+|+..-. ..++.++ ++...-.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f--~~~~~~~------------------~~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF--PVQIWME------------------DCPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC--CEEEeec------------------CCCCCcC
Confidence 3446677899999999999999999999999999999999985311 1111111 1111223
Q ss_pred chhHHHHHHHHhhcCCEEEEecCCCCchhhhhhc
Q 012767 253 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKA 286 (456)
Q Consensus 253 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~A 286 (456)
|+--..+++.+.-....|+||||+.+|+.+-++|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 3333455566655566799999999999877654
No 102
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.13 E-value=0.0019 Score=60.86 Aligned_cols=98 Identities=16% Similarity=0.197 Sum_probs=66.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|++++++|+-....+....+.+|+..-. ..++.+++ .....|.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f--~~i~~~~~-------------------~~~~KP~ 152 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF--DAVITSEE-------------------EGVEKPH 152 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc--cEEEEecc-------------------CCCCCCC
Confidence 47899999999999999999999999888888888888875311 11111111 1112222
Q ss_pred h--HHHHHHHHhhcCCEEEEecCCC-CchhhhhhcCee-EEec
Q 012767 255 H--KYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG-IAVA 293 (456)
Q Consensus 255 ~--K~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvG-Ia~~ 293 (456)
. =..+.+.+.-....++||||.. +|+.+-++||+- |.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 153 PKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 1 1233344443445799999998 999999999874 4444
No 103
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.12 E-value=0.0015 Score=62.69 Aligned_cols=90 Identities=18% Similarity=0.202 Sum_probs=62.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCc----HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhccccc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQ----LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 249 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~----~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a 249 (456)
-.|.+++.++++.+++.|+++.++||.. ..++..+.+..|++...+-..++.|+.
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~--------------------- 171 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDK--------------------- 171 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCC---------------------
Confidence 3467889999999999999999999964 568888888899952211112222210
Q ss_pred ccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee
Q 012767 250 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 289 (456)
Q Consensus 250 ~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG 289 (456)
..-.+|...+ ++.+ .++|+||..+|..+-+.|++-
T Consensus 172 -~~K~~K~~~l---~~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 172 -PGQYTKTQWL---KKKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred -CCCCCHHHHH---HhcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 0113444433 3333 589999999999999999875
No 104
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.09 E-value=0.0023 Score=63.39 Aligned_cols=110 Identities=14% Similarity=0.071 Sum_probs=75.9
Q ss_pred ccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccc
Q 012767 171 PLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 250 (456)
Q Consensus 171 ~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~ 250 (456)
...+++.|++.++++.|++.|++++++||.....+..+.+.+|+....+. .+.|.+. ...+.....-.+
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~--~i~~~~~---------~~~~~~~~~~~k 251 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD--DLIGRPP---------DMHFQREQGDKR 251 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh--hhhCCcc---------hhhhcccCCCCC
Confidence 35788999999999999999999999999999999999999988531111 1111110 000000000113
Q ss_pred cCchhHHHHHHHHhh-cCCEEEEecCCCCchhhhhhcCeeEE
Q 012767 251 VFPEHKYEIVKHLQA-RNHICGMIGNGVNDAPALKKADIGIA 291 (456)
Q Consensus 251 ~~P~~K~~iV~~lq~-~g~~v~~iGDG~ND~~aLk~AdvGIa 291 (456)
-.|+-+...++.+.. ....++|+||..+|+.+-+.|++...
T Consensus 252 p~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i 293 (300)
T PHA02530 252 PDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECW 293 (300)
T ss_pred CcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEE
Confidence 345566666666543 34789999999999999999998743
No 105
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=97.04 E-value=0.00092 Score=59.60 Aligned_cols=98 Identities=19% Similarity=0.240 Sum_probs=68.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
.++.|++.++++.|++.|++++++|+..........+.+|+.. +...++...+. ....-.|
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~--~f~~i~~~~~~-----------------~~~Kp~~ 136 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDD--YFDEIISSDDV-----------------GSRKPDP 136 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGG--GCSEEEEGGGS-----------------SSSTTSH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCccccccccccccccc--ccccccccchh-----------------hhhhhHH
Confidence 3578999999999999999999999999999999999999862 11122211110 0011111
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeE
Q 012767 254 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 290 (456)
Q Consensus 254 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI 290 (456)
+-=..+++.+.-....+++|||+..|+.+-+.||+.-
T Consensus 137 ~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 137 DAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 2223455555555678999999999999999998753
No 106
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=97.00 E-value=0.0024 Score=59.22 Aligned_cols=95 Identities=16% Similarity=0.189 Sum_probs=65.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+-+......+.+.+|+... + ..++..++ .....|.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~-f-d~i~~s~~-------------------~~~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDP-F-DAVLSADA-------------------VRAYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhh-h-heeEehhh-------------------cCCCCCC
Confidence 4679999999999999999999999998888888888997421 1 11111110 0111222
Q ss_pred h--HHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeE
Q 012767 255 H--KYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 290 (456)
Q Consensus 255 ~--K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI 290 (456)
. =..+.+.+.-....+++|||+.+|+.+-+.||+-.
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 1 12334444444567999999999999999998763
No 107
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.98 E-value=0.0018 Score=62.28 Aligned_cols=89 Identities=19% Similarity=0.188 Sum_probs=61.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC----cHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGD----QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 250 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD----~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~ 250 (456)
.+.+++.++++.+++.|+++.++|+. ...++..+.+.+|+... + ..++.++... .
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~-f-~~i~~~d~~~-------------------~ 172 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM-N-PVIFAGDKPG-------------------Q 172 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh-e-eEEECCCCCC-------------------C
Confidence 35556999999999999999999998 66789999999999631 1 1122211100 0
Q ss_pred cCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee
Q 012767 251 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 289 (456)
Q Consensus 251 ~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG 289 (456)
..| +|. ..+++.+ .++|+||..||..+-+.|++-
T Consensus 173 ~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 173 YQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 112 232 2344444 589999999999999999865
No 108
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.98 E-value=0.0034 Score=62.13 Aligned_cols=117 Identities=18% Similarity=0.135 Sum_probs=71.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCC-ccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPS-SALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~-~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
++.|++.++++.|++.|+++.++|+-.......+-...+... .... .++.+++. ....-.|
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~-~~~~~~~v~~~~~-----------------~~~KP~p 205 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPE-RAQGLDVFAGDDV-----------------PKKKPDP 205 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccc-ccCceEEEecccc-----------------CCCCCCH
Confidence 578999999999999999999999988877766655543211 0110 11111100 0011112
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEec-cc--cHHHhhcccEEeeC
Q 012767 254 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVA-DA--TDAARSAADIVLTE 309 (456)
Q Consensus 254 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~-~~--~~~a~~aaDivl~~ 309 (456)
+-=..+++.+.-....++||||+.+|+.|-+.||+....- .+ .......+|+++.+
T Consensus 206 ~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 206 DIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred HHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 2223344555444567999999999999999999875543 22 11112357887743
No 109
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.96 E-value=0.0022 Score=58.14 Aligned_cols=112 Identities=13% Similarity=0.018 Sum_probs=73.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
.++|+-++.++.+++.+++++++|+........+-..++=-...++..++..+..-.. .... .++. -.....-.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~--dg~h-~i~~---~~ds~fG~ 146 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHI--DGQH-SIKY---TDDSQFGH 146 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcC--CCce-eeec---CCccccCC
Confidence 3789999999999999999999999988888877776652111111111111100000 0000 0000 01133346
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEe
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 292 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~ 292 (456)
+|...|+.+.+....+.|+|||+.|..|-+.+|+=.|-
T Consensus 147 dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 147 DKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred CcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 79999999999999999999999999988887766553
No 110
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=96.96 E-value=0.0024 Score=60.77 Aligned_cols=99 Identities=12% Similarity=0.041 Sum_probs=66.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc-
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP- 253 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P- 253 (456)
++.|++.++++.|++.|+++.++|+-....+...-+.+|+..- + ..++.+++ +....|
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~-f-d~iv~s~~-------------------~~~~KP~ 151 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAH-L-DLLLSTHT-------------------FGYPKED 151 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHH-C-CEEEEeee-------------------CCCCCCC
Confidence 5689999999999999999999999888888877777887421 1 11111110 111122
Q ss_pred -hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee--EEecc
Q 012767 254 -EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG--IAVAD 294 (456)
Q Consensus 254 -~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG--Ia~~~ 294 (456)
+-=..+.+.+.-....++||||..+|+.+-+.||+. +++.+
T Consensus 152 p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 152 QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 111222333433455699999999999999999996 44544
No 111
>PRK06769 hypothetical protein; Validated
Probab=96.96 E-value=0.0025 Score=58.22 Aligned_cols=121 Identities=9% Similarity=0.057 Sum_probs=69.7
Q ss_pred cCeeeEEeeeecCCCCcCCCCCCceEeEecccCC----CCCcchHHHHHHHHhCCCeEEEEcCCcHH--------HHHHH
Q 012767 141 GLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFD----PPIHDSAETIRRALSLGLGVKMITGDQLA--------IAKET 208 (456)
Q Consensus 141 Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d----~~r~~~~~~I~~l~~~Gi~v~miTGD~~~--------~a~~i 208 (456)
|+|+|.+-..+ ++.|-..+.+ ++.|++.++++.|++.|+++.++|+.... .....
T Consensus 3 ~~~~~~~d~d~-------------~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~ 69 (173)
T PRK06769 3 NIQAIFIDRDG-------------TIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQE 69 (173)
T ss_pred CCcEEEEeCCC-------------cccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHH
Confidence 67777776544 3333322222 26799999999999999999999987631 12222
Q ss_pred HHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCe
Q 012767 209 GRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI 288 (456)
Q Consensus 209 a~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv 288 (456)
.+..|+..- +......+++. ....-.|+-=..+++.+....+.++||||..+|+.+-+.|++
T Consensus 70 l~~~g~~~~-~~~~~~~~~~~-----------------~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi 131 (173)
T PRK06769 70 LKGFGFDDI-YLCPHKHGDGC-----------------ECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNA 131 (173)
T ss_pred HHhCCcCEE-EECcCCCCCCC-----------------CCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCC
Confidence 334555310 00000000000 011112222234455554445679999999999999999988
Q ss_pred eEEe
Q 012767 289 GIAV 292 (456)
Q Consensus 289 GIa~ 292 (456)
-...
T Consensus 132 ~~i~ 135 (173)
T PRK06769 132 TTIL 135 (173)
T ss_pred eEEE
Confidence 6553
No 112
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.86 E-value=0.008 Score=55.06 Aligned_cols=127 Identities=20% Similarity=0.143 Sum_probs=69.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHH
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~---------------~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~ 240 (456)
+.||+.++++.|++.|+++.++|.... .....+-+.+|+. +...+.......+.
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~---f~~i~~~~~~~~~~-------- 98 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGR---LDGIYYCPHHPEDG-------- 98 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCc---cceEEECCCCCCCC--------
Confidence 579999999999999999999998762 1112223344542 11000000000000
Q ss_pred HHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEE-eccccH---HHhhcc--cEEeeCCCchH
Q 012767 241 LIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VADATD---AARSAA--DIVLTEPGLNV 314 (456)
Q Consensus 241 ~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa-~~~~~~---~a~~aa--Divl~~~~l~~ 314 (456)
.....-.|+--..+++.+.-....++||||+.+|+.+-+.|++..- +..+.. .....+ |+++ +++..
T Consensus 99 -----~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~e 171 (181)
T PRK08942 99 -----CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLAD 171 (181)
T ss_pred -----CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHHH
Confidence 0011112222234445555455779999999999999999997432 222211 112234 7776 44666
Q ss_pred HHHHHH
Q 012767 315 IITAVL 320 (456)
Q Consensus 315 i~~~i~ 320 (456)
+..++.
T Consensus 172 l~~~l~ 177 (181)
T PRK08942 172 LPQALK 177 (181)
T ss_pred HHHHHH
Confidence 655543
No 113
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.86 E-value=0.0055 Score=55.73 Aligned_cols=110 Identities=10% Similarity=0.105 Sum_probs=72.7
Q ss_pred HHHHccCeeeEEeeeecCCCCcCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCc-HHHHHHHHHHhCC
Q 012767 136 KFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQ-LAIAKETGRRLGM 214 (456)
Q Consensus 136 ~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~-~~~a~~ia~~lGi 214 (456)
.+.+.|.+.+.+-+.. ++.-- =...+-|++.++++.|++.|+++.++|+.+ ...+..+.+.+|+
T Consensus 19 ~~~~~~v~~vv~D~Dg-------------tl~~~--~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 19 LLKKVGIKGVVLDKDN-------------TLVYP--DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred HHHHCCCCEEEEecCC-------------ccccC--CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 3456788888776543 11100 123567999999999999999999999987 5667777777776
Q ss_pred CCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchh--HHHHHHHHhhcCCEEEEecCCC-CchhhhhhcCeeE
Q 012767 215 GTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH--KYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGI 290 (456)
Q Consensus 215 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~--K~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvGI 290 (456)
... +....|.. =..+.+.+.-....++||||.. .|+.+-+.|++-.
T Consensus 84 ~~~------------------------------~~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~ 132 (170)
T TIGR01668 84 PVL------------------------------PHAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYT 132 (170)
T ss_pred EEE------------------------------cCCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeE
Confidence 310 11112221 1223333333345699999998 7999999998743
No 114
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.83 E-value=0.0099 Score=60.94 Aligned_cols=120 Identities=16% Similarity=0.119 Sum_probs=79.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.||+.++++.|++.|+++.++|+.....+..+-+.+||..- -..++.+++.. ...-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~y--Fd~Iv~sddv~-----------------~~KP~Pe 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGF--FSVIVAAEDVY-----------------RGKPDPE 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHH--ceEEEecCcCC-----------------CCCCCHH
Confidence 4779999999999999999999999999999999999998531 11122111100 0111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEe-ccccHHH-hhcccEEeeCCCchHH
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV-ADATDAA-RSAADIVLTEPGLNVI 315 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~-~~~~~~a-~~aaDivl~~~~l~~i 315 (456)
-=...++.+.-....|+||||..+|+.|-+.|++-... ..+.... ...+|+++. ++..+
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~--s~~EL 337 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVR--RLDEL 337 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEEC--CHHHH
Confidence 22344555555567899999999999999999985433 2322222 235788774 35544
No 115
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.79 E-value=0.005 Score=53.17 Aligned_cols=93 Identities=14% Similarity=0.149 Sum_probs=63.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCc--------HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQ--------LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 246 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~--------~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 246 (456)
++.|++.++++.|++.|+++.++|+.. ......+.+.+|+.... ....+
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~-------------------- 81 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP-------------------- 81 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC--------------------
Confidence 578999999999999999999999988 67777888888874110 00100
Q ss_pred cccccCchhHHHHHHHHh-hcCCEEEEecC-CCCchhhhhhcCeeE
Q 012767 247 GFAGVFPEHKYEIVKHLQ-ARNHICGMIGN-GVNDAPALKKADIGI 290 (456)
Q Consensus 247 v~a~~~P~~K~~iV~~lq-~~g~~v~~iGD-G~ND~~aLk~AdvGI 290 (456)
.+..-.|+-=..+++.++ -....++|||| ..+|+.+-+.+++-.
T Consensus 82 ~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~ 127 (132)
T TIGR01662 82 HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAF 127 (132)
T ss_pred CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeE
Confidence 000111121123444442 44567999999 699999999988643
No 116
>PTZ00174 phosphomannomutase; Provisional
Probab=96.77 E-value=0.00096 Score=64.50 Aligned_cols=59 Identities=25% Similarity=0.379 Sum_probs=49.4
Q ss_pred cccCc--hhHHHHHHHHhhcCCEEEEecC----CCCchhhhhhc-CeeEEeccccHHHhhcccEEe
Q 012767 249 AGVFP--EHKYEIVKHLQARNHICGMIGN----GVNDAPALKKA-DIGIAVADATDAARSAADIVL 307 (456)
Q Consensus 249 a~~~P--~~K~~iV~~lq~~g~~v~~iGD----G~ND~~aLk~A-dvGIa~~~~~~~a~~aaDivl 307 (456)
.++.| -+|+.-++.|.+....|+++|| |.||.+||+.| -.|++++|+.+..+..+.+++
T Consensus 180 leI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 180 FDVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred EEeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 35555 5799999999888888999999 99999999976 688888899999998876543
No 117
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=96.76 E-value=0.0056 Score=57.52 Aligned_cols=119 Identities=10% Similarity=0.102 Sum_probs=74.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++. +++.++|+-....+..+.+.+|+..-. ..++.+.+ .....|.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~-------------------~~~~KP~ 154 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSED-------------------AGIQKPD 154 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCc-------------------cCCCCCC
Confidence 4689999999999999 999999999888888888889885321 11111110 0011232
Q ss_pred hH--HHHHHHH-hhcCCEEEEecCCC-CchhhhhhcCee-EEecc--ccHHHhhcccEEeeCCCchHHHH
Q 012767 255 HK--YEIVKHL-QARNHICGMIGNGV-NDAPALKKADIG-IAVAD--ATDAARSAADIVLTEPGLNVIIT 317 (456)
Q Consensus 255 ~K--~~iV~~l-q~~g~~v~~iGDG~-ND~~aLk~AdvG-Ia~~~--~~~~a~~aaDivl~~~~l~~i~~ 317 (456)
.. ...++.+ .-....++||||.. +|+.+-+.+|+. |.+.. .+......++.++ +++..+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 11 2333444 33345699999998 899999999973 33332 2212223456666 34555443
No 118
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=96.73 E-value=0.0067 Score=58.69 Aligned_cols=68 Identities=19% Similarity=0.189 Sum_probs=48.0
Q ss_pred hhHHHHHHHHhhc----CCEEEEecCCCCchhhhhhcCeeEEeccccHH-----Hhhc---cc-EEeeCCCchHHHHHHH
Q 012767 254 EHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKADIGIAVADATDA-----ARSA---AD-IVLTEPGLNVIITAVL 320 (456)
Q Consensus 254 ~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~-----a~~a---aD-ivl~~~~l~~i~~~i~ 320 (456)
..|...|+.|+++ ...|+++||+.||.+||..++-||.|+|+.+. .... .. ++-..+.-.+|.+.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 5699999998876 24688899999999999999999999998887 2222 22 3444566677777765
Q ss_pred H
Q 012767 321 I 321 (456)
Q Consensus 321 ~ 321 (456)
+
T Consensus 244 ~ 244 (247)
T PF05116_consen 244 H 244 (247)
T ss_dssp H
T ss_pred H
Confidence 3
No 119
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.70 E-value=0.0031 Score=57.43 Aligned_cols=94 Identities=12% Similarity=0.068 Sum_probs=59.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++|+.|++.|+++.++|+... +..+.+.+|+.... ..++.+.+. ....-.|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~~-----------------~~~kp~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAEI-----------------KKGKPDPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhhc-----------------CCCCCChH
Confidence 5779999999999999999999997532 34566777774221 111111100 01111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 289 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG 289 (456)
-=..+.+.+.-....++||||..+|+.+-+.|++-
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 11233344433345699999999999999999875
No 120
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.65 E-value=0.0044 Score=56.44 Aligned_cols=94 Identities=12% Similarity=0.159 Sum_probs=60.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
-++.|++.++++.|++.|+++.++|+. ..+..+-+.+|+..-. ..++.+.+ .....|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f--~~v~~~~~-------------------~~~~kp 143 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF--DAIVDADE-------------------VKEGKP 143 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC--CEeeehhh-------------------CCCCCC
Confidence 357899999999999999999999987 5566777778874211 11111100 001122
Q ss_pred hhH--HHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeE
Q 012767 254 EHK--YEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 290 (456)
Q Consensus 254 ~~K--~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI 290 (456)
... ..+.+.+.-....++||||+.+|+.+-+.|++..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 144 HPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeE
Confidence 211 1223333333456999999999999999998753
No 121
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.65 E-value=0.0069 Score=54.85 Aligned_cols=95 Identities=15% Similarity=0.173 Sum_probs=61.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|++.|+++.++|+-.... ..+..++|+... + ..++.+.+. ....-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~-f-~~i~~~~~~-----------------~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDL-F-DVVIFSGDV-----------------GRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHH-C-CEEEEcCCC-----------------CCCCCCHH
Confidence 578999999999999999999999988777 555555777421 1 111111100 01111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG 289 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG 289 (456)
-=..+.+.+.-....++++||...|+.+-+++++-
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 22334444444457799999999999999998873
No 122
>PLN02580 trehalose-phosphatase
Probab=96.62 E-value=0.022 Score=58.43 Aligned_cols=67 Identities=24% Similarity=0.239 Sum_probs=47.6
Q ss_pred ccCch---hHHHHHHHHhhc-C-----C-EEEEecCCCCchhhhhh-----cCeeEEeccccHHHhhcccEEeeCCCchH
Q 012767 250 GVFPE---HKYEIVKHLQAR-N-----H-ICGMIGNGVNDAPALKK-----ADIGIAVADATDAARSAADIVLTEPGLNV 314 (456)
Q Consensus 250 ~~~P~---~K~~iV~~lq~~-g-----~-~v~~iGDG~ND~~aLk~-----AdvGIa~~~~~~~a~~aaDivl~~~~l~~ 314 (456)
++.|. +|...|+.+.+. | . .++++||+.||..||+. +++||+|+++... ..|++.|.+ -..
T Consensus 293 EVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~--t~A~y~L~d--p~e 368 (384)
T PLN02580 293 EVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKE--SNAFYSLRD--PSE 368 (384)
T ss_pred EEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCC--ccceEEcCC--HHH
Confidence 45564 899988887655 2 1 25899999999999996 6999999876542 356777744 555
Q ss_pred HHHHHH
Q 012767 315 IITAVL 320 (456)
Q Consensus 315 i~~~i~ 320 (456)
+..++.
T Consensus 369 V~~~L~ 374 (384)
T PLN02580 369 VMEFLK 374 (384)
T ss_pred HHHHHH
Confidence 554443
No 123
>PRK09449 dUMP phosphatase; Provisional
Probab=96.49 E-value=0.013 Score=55.27 Aligned_cols=123 Identities=12% Similarity=0.105 Sum_probs=73.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.|+ .|+++.++|+.....+...-+.+|+..- + ..++.+++. ....-.|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~-f-d~v~~~~~~-----------------~~~KP~p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDY-F-DLLVISEQV-----------------GVAKPDVA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHH-c-CEEEEECcc-----------------CCCCCCHH
Confidence 36799999999999 6899999999888888887788887421 1 111111100 00111111
Q ss_pred hHHHHHHHHhhc-CCEEEEecCCC-CchhhhhhcCee-EEec-cccH-HHhhcccEEeeCCCchHHHHHH
Q 012767 255 HKYEIVKHLQAR-NHICGMIGNGV-NDAPALKKADIG-IAVA-DATD-AARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 255 ~K~~iV~~lq~~-g~~v~~iGDG~-ND~~aLk~AdvG-Ia~~-~~~~-~a~~aaDivl~~~~l~~i~~~i 319 (456)
-=..+++.+.-. ...++||||.. +|+.+-+.|++- |.+. .+.. .....+|+++ +++..+..++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 112334444322 24699999998 799999999985 4443 2211 1112467776 4466665543
No 124
>PLN02940 riboflavin kinase
Probab=96.37 E-value=0.012 Score=60.71 Aligned_cols=116 Identities=18% Similarity=0.192 Sum_probs=72.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH-HhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR-RLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~-~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
++.|++.++++.|++.|+++.|+|+.....+..... ..|+.... ..++.+++. ....-.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~v-----------------~~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDEV-----------------EKGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhhc-----------------CCCCCCH
Confidence 367999999999999999999999998877766554 56764211 111111100 0111122
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEE-eccc--cHHHhhcccEEeeC
Q 012767 254 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA-VADA--TDAARSAADIVLTE 309 (456)
Q Consensus 254 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa-~~~~--~~~a~~aaDivl~~ 309 (456)
+-=..+++.+.-....|+||||+.+|+.+-+.||+... +..+ .......+|.++.+
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~s 212 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINS 212 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCC
Confidence 22234445554446679999999999999999998743 3322 22233456666633
No 125
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.31 E-value=0.019 Score=52.47 Aligned_cols=112 Identities=8% Similarity=-0.044 Sum_probs=70.5
Q ss_pred eEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCC-cHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHh
Q 012767 165 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGD-QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 243 (456)
Q Consensus 165 ~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD-~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 243 (456)
.......-.-++.|++.++++.|++.|+++.++|+- ....+..+...+|+..... ...+.+...
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~---------------~~~~~~~Fd 99 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK---------------TVPMHSLFD 99 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC---------------cccHHHhce
Confidence 344555556678899999999999999999999976 8888888888888741000 000000000
Q ss_pred hcccccccCchhH--HHHHHHHhhc------CCEEEEecCCCCchhhhhhcCeeEEe
Q 012767 244 KADGFAGVFPEHK--YEIVKHLQAR------NHICGMIGNGVNDAPALKKADIGIAV 292 (456)
Q Consensus 244 ~~~v~a~~~P~~K--~~iV~~lq~~------g~~v~~iGDG~ND~~aLk~AdvGIa~ 292 (456)
. .+.+.-.+..| ..+.+.+.+. ...++||||...|+.+-++|++-...
T Consensus 100 ~-iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 100 D-RIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred e-eeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 0 01111111112 2344544432 35699999999999999999886654
No 126
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=96.26 E-value=0.036 Score=49.83 Aligned_cols=102 Identities=14% Similarity=0.136 Sum_probs=65.1
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH---HHHHHh---C--CCCCCCCCccc--cCCchhhhhhcCChHHHH
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAK---ETGRRL---G--MGTNMYPSSAL--SGQDRDESIVALPVDELI 242 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~---~ia~~l---G--i~~~~~~~~~l--~g~~~~~~~~~~~~~~~~ 242 (456)
+|.+.|+++++++++++.|++++++||.....+. .....+ | ++. ..++ +|..... ..
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~~~g~~~~~-~~-------- 91 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLLSPDRLFAA-LH-------- 91 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEEcCCcchhh-hh--------
Confidence 4677899999999999999999999999988774 444442 2 321 1111 1111100 00
Q ss_pred hhcccccccCchhHHHHHHHHhh-----cCCEEEEecCCCCchhhhhhcCee
Q 012767 243 EKADGFAGVFPEHKYEIVKHLQA-----RNHICGMIGNGVNDAPALKKADIG 289 (456)
Q Consensus 243 ~~~~v~a~~~P~~K~~iV~~lq~-----~g~~v~~iGDG~ND~~aLk~AdvG 289 (456)
. .+..+-.-+.|.+.++.+.+ ....++.+|++.+|+.+.++++|.
T Consensus 92 -~-e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 92 -R-EVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred -c-ccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 0 11112122347777777766 345677899999999999998765
No 127
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=96.20 E-value=0.0084 Score=53.19 Aligned_cols=95 Identities=14% Similarity=-0.031 Sum_probs=64.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++||++.++++.|+ .++++.++|.-....+..+-+.+++... +...++.+++. ....|.
T Consensus 45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~-~f~~i~~~~d~-------------------~~~KP~ 103 (148)
T smart00577 45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY-FGYRRLFRDEC-------------------VFVKGK 103 (148)
T ss_pred EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC-EeeeEEECccc-------------------cccCCe
Confidence 47999999999998 5799999999999999999999887421 11112221111 011121
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEE
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIA 291 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa 291 (456)
=...++.+......|+||||..+|..+-+.++|-|.
T Consensus 104 -~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 104 -YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred -EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 011233344446679999999999998888866654
No 128
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.19 E-value=0.019 Score=52.32 Aligned_cols=121 Identities=15% Similarity=0.129 Sum_probs=63.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHH---------------HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHH
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLA---------------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDE 240 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~---------------~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~ 240 (456)
+.|++.++|+.|++.|+++.++|.-... ....+....|+.-. ..........+ .. .+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~i~~~~~~~~~-~~--~~~- 99 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLD---GIYYCPHHPEG-VE--EFR- 99 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCcc---EEEECCCCCcc-cc--ccc-
Confidence 5689999999999999999999976531 11122333333210 00000000000 00 000
Q ss_pred HHhhcccccccCch--hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee--EEeccccH---HHhhcccEEee
Q 012767 241 LIEKADGFAGVFPE--HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG--IAVADATD---AARSAADIVLT 308 (456)
Q Consensus 241 ~~~~~~v~a~~~P~--~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG--Ia~~~~~~---~a~~aaDivl~ 308 (456)
.-.....|. -=....+.+.-....++||||..+|+.+-+.|++. |.+..+.. .....+|+++.
T Consensus 100 -----~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~ 169 (176)
T TIGR00213 100 -----QVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLN 169 (176)
T ss_pred -----CCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEec
Confidence 000011222 11223333333456799999999999999999985 34433221 11234788874
No 129
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=96.17 E-value=0.014 Score=52.71 Aligned_cols=98 Identities=11% Similarity=0.085 Sum_probs=59.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCc---------------HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChH
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQ---------------LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 239 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~---------------~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 239 (456)
++-|++.++++.|++.|+++.++|.-. ......+...+|+. +...++......+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd~ii~~~~~~~~-------- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII---FDDVLICPHFPDD-------- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc---eeEEEECCCCCCC--------
Confidence 356899999999999999999999852 33455666777774 1111110000000
Q ss_pred HHHhhcccccccCchhHHHHHHHH----hhcCCEEEEecCCCCchhhhhhcCeeEEe
Q 012767 240 ELIEKADGFAGVFPEHKYEIVKHL----QARNHICGMIGNGVNDAPALKKADIGIAV 292 (456)
Q Consensus 240 ~~~~~~~v~a~~~P~~K~~iV~~l----q~~g~~v~~iGDG~ND~~aLk~AdvGIa~ 292 (456)
+ +....|. .+++..+ ......++||||+.+|+.+-+.|++....
T Consensus 98 ------~-~~~~KP~--~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 98 ------N-CDCRKPK--IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred ------C-CCCCCCC--HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 0 0011222 2333332 22234699999999999999999887543
No 130
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=96.16 E-value=0.012 Score=52.07 Aligned_cols=98 Identities=16% Similarity=0.173 Sum_probs=59.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcH---------------HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChH
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVD 239 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~---------------~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 239 (456)
++.|++.++++.|++.|+++.++|+... .....+.+.+|+.... ..+......
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~~~~~--------- 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG---VLFCPHHPA--------- 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE---EEECCCCCC---------
Confidence 4689999999999999999999998762 3455566777774110 000000000
Q ss_pred HHHhhcccccccCchhH--HHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeE
Q 012767 240 ELIEKADGFAGVFPEHK--YEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 290 (456)
Q Consensus 240 ~~~~~~~v~a~~~P~~K--~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI 290 (456)
.......|+.+ ..+++.+.-....++||||...|+.+-+.+++-.
T Consensus 95 ------~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 95 ------DNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 00000122211 2233333333466999999999999999988753
No 131
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=96.11 E-value=0.018 Score=50.82 Aligned_cols=90 Identities=20% Similarity=0.235 Sum_probs=56.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchh
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH 255 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 255 (456)
..+++.++++.|++.|+++.++|+-....+....+.. +... + ..++..+ ++...-.|+-
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f-~~i~~~~------------------~~~~Kp~~~~ 123 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-F-DLILGSD------------------EFGAKPEPEI 123 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-C-cEEEecC------------------CCCCCcCHHH
Confidence 3479999999999999999999999988888777765 3211 1 1111100 0111111211
Q ss_pred HHHHHHHHhhcCCEEEEecCCCCchhhhhhcC
Q 012767 256 KYEIVKHLQARNHICGMIGNGVNDAPALKKAD 287 (456)
Q Consensus 256 K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Ad 287 (456)
=..+.+.+.-.. .+++|||..+|+.+-+.|+
T Consensus 124 ~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 124 FLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 122333343334 7999999999998888764
No 132
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.05 E-value=0.017 Score=53.66 Aligned_cols=95 Identities=15% Similarity=0.116 Sum_probs=58.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++-|++.++++.|++.|+++.++|+-... .....+.+|+... + ..++...+. ....-.|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~-f-d~i~~s~~~-----------------~~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEY-F-DFVVTSYEV-----------------GAEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHh-c-ceEEeeccc-----------------CCCCCCHH
Confidence 56789999999999999999999986553 4566677777421 1 111111000 00111111
Q ss_pred hHHHHHHHHhhcCCEEEEecCCC-CchhhhhhcCee
Q 012767 255 HKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIG 289 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvG 289 (456)
-=..+++.+.-....++||||+. +|+.+-++||+-
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 11223344443456799999997 899998988764
No 133
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.89 E-value=0.051 Score=48.75 Aligned_cols=113 Identities=10% Similarity=0.173 Sum_probs=79.9
Q ss_pred HHHHHHHHHccCeeeEEeeeecCCCCcCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH
Q 012767 131 NAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR 210 (456)
Q Consensus 131 ~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~ 210 (456)
+-..+.+..+|.+.+.+-.+. +++..= ....-|++++=+..++.+|+++.++|.-+...+...+.
T Consensus 17 ~i~~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~ 81 (175)
T COG2179 17 DITPDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAE 81 (175)
T ss_pred hCCHHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhh
Confidence 334678899999999886654 433321 12345788888999999999999999999999999999
Q ss_pred HhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhh---cCCEEEEecCCC-Cchhhhhhc
Q 012767 211 RLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQA---RNHICGMIGNGV-NDAPALKKA 286 (456)
Q Consensus 211 ~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~---~g~~v~~iGDG~-ND~~aLk~A 286 (456)
.+|++- ++.-..|-.+ .+-+++++ ....|+||||.. .|+.+=+.+
T Consensus 82 ~l~v~f------------------------------i~~A~KP~~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~ 130 (175)
T COG2179 82 KLGVPF------------------------------IYRAKKPFGR-AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRA 130 (175)
T ss_pred hcCCce------------------------------eecccCccHH-HHHHHHHHcCCChhHEEEEcchhhhhhhccccc
Confidence 999851 1222223322 34444444 456799999985 888877777
Q ss_pred Cee
Q 012767 287 DIG 289 (456)
Q Consensus 287 dvG 289 (456)
++-
T Consensus 131 G~~ 133 (175)
T COG2179 131 GMR 133 (175)
T ss_pred CcE
Confidence 654
No 134
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=95.82 E-value=0.047 Score=52.29 Aligned_cols=101 Identities=20% Similarity=0.255 Sum_probs=66.3
Q ss_pred CCCcchHHHHHHH--HhCCCeEEEEcCCcHHHHHHHHHHhCCCCCC---C-CCccccCCchhhhhhcCChHHHHhhcccc
Q 012767 175 PPIHDSAETIRRA--LSLGLGVKMITGDQLAIAKETGRRLGMGTNM---Y-PSSALSGQDRDESIVALPVDELIEKADGF 248 (456)
Q Consensus 175 ~~r~~~~~~I~~l--~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~---~-~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ 248 (456)
|+.|+.+++++.+ +..|+.+.++|.-+.-.-..+-+.-|+.... + +...+..+. .+.-.+.. .+.+
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G---~l~v~pyh-----~h~C 142 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADG---RLRVRPYH-----SHGC 142 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCc---eEEEeCcc-----CCCC
Confidence 5678999999999 5689999999999999889999998885321 1 111111100 00000000 0223
Q ss_pred cccCc-hhHHHHHHHHhhc----C---CEEEEecCCCCch-hhh
Q 012767 249 AGVFP-EHKYEIVKHLQAR----N---HICGMIGNGVNDA-PAL 283 (456)
Q Consensus 249 a~~~P-~~K~~iV~~lq~~----g---~~v~~iGDG~ND~-~aL 283 (456)
..+.| -=|..+++.+++. | ..|.+||||.||. |++
T Consensus 143 ~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~ 186 (234)
T PF06888_consen 143 SLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPAL 186 (234)
T ss_pred CcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCccc
Confidence 44444 3599999888765 3 6899999999997 444
No 135
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.58 E-value=0.083 Score=50.74 Aligned_cols=48 Identities=17% Similarity=0.255 Sum_probs=37.8
Q ss_pred EecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH--HHHHHhCCC
Q 012767 168 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAK--ETGRRLGMG 215 (456)
Q Consensus 168 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~--~ia~~lGi~ 215 (456)
|.+.-...+-|++.++++.|+++|+++.++|.-...... ...+++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 455556778899999999999999999999996554443 456778875
No 136
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=95.55 E-value=0.069 Score=52.21 Aligned_cols=87 Identities=13% Similarity=0.078 Sum_probs=59.2
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHH---HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhccccc
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAI---AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 249 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~---a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a 249 (456)
..++-|++.++++.|++.|+++.++|+..... +...-+..|++...... ++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~-------------------------lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEH-------------------------LLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcce-------------------------EEe
Confidence 45578999999999999999999999987433 34555667875321111 111
Q ss_pred ccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhh
Q 012767 250 GVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALK 284 (456)
Q Consensus 250 ~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk 284 (456)
+-....|....+.+.+...+++++||-.+|.....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 11123455666666666677999999999986543
No 137
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=95.50 E-value=0.012 Score=64.21 Aligned_cols=40 Identities=10% Similarity=0.133 Sum_probs=36.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 215 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~ 215 (456)
.-+.+.++|++|+++|+.+++.||.....+..+.+.+|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3357799999999999999999999999999999999874
No 138
>PLN02811 hydrolase
Probab=95.44 E-value=0.038 Score=52.22 Aligned_cols=101 Identities=12% Similarity=0.171 Sum_probs=58.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHH-HHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAK-ETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~-~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
++.|++.++|+.|++.|+++.++||-...... .+.+..++.. +-..++.+++.+ . ....-.|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~--~f~~i~~~~~~~--~-------------~~~KP~p 140 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS--LMHHVVTGDDPE--V-------------KQGKPAP 140 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh--hCCEEEECChhh--c-------------cCCCCCc
Confidence 46799999999999999999999997764332 2222223321 001111111000 0 0001112
Q ss_pred hhHHHHHHHHh---hcCCEEEEecCCCCchhhhhhcCeeEEe
Q 012767 254 EHKYEIVKHLQ---ARNHICGMIGNGVNDAPALKKADIGIAV 292 (456)
Q Consensus 254 ~~K~~iV~~lq---~~g~~v~~iGDG~ND~~aLk~AdvGIa~ 292 (456)
+-=...++.+. -....|+||||+..|+.|-+.|++....
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~ 182 (220)
T PLN02811 141 DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVM 182 (220)
T ss_pred HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEE
Confidence 21123344443 2246699999999999999999986543
No 139
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=95.36 E-value=0.039 Score=56.14 Aligned_cols=99 Identities=10% Similarity=0.053 Sum_probs=59.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCC---------------cHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCCh
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPV 238 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD---------------~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~ 238 (456)
-++.|++.++++.|++.|+++.|+|+- .......+.+..|+. +....+......+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~---fd~i~i~~~~~sd------- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK---FDEVLICPHFPED------- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc---eeeEEEeCCcCcc-------
Confidence 357899999999999999999999983 123445566666663 1111111000000
Q ss_pred HHHHhhcccccccCchhHHHHHHHH----hhcCCEEEEecCCCCchhhhhhcCeeEEe
Q 012767 239 DELIEKADGFAGVFPEHKYEIVKHL----QARNHICGMIGNGVNDAPALKKADIGIAV 292 (456)
Q Consensus 239 ~~~~~~~~v~a~~~P~~K~~iV~~l----q~~g~~v~~iGDG~ND~~aLk~AdvGIa~ 292 (456)
+..+ ..|+ ..++..+ .-....++||||+.+|..+-+.|++-...
T Consensus 99 -------~~~~-rKP~--p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~ 146 (354)
T PRK05446 99 -------NCSC-RKPK--TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIR 146 (354)
T ss_pred -------cCCC-CCCC--HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEE
Confidence 0001 1222 2233322 22346799999999999999999987543
No 140
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=95.16 E-value=0.03 Score=53.98 Aligned_cols=64 Identities=20% Similarity=0.229 Sum_probs=46.3
Q ss_pred CchhHHHHHHHHhhc----CCEEEEecCCCCchhhhhhc--------CeeEEeccccHHHhhcccEEeeCCCchHHHHHH
Q 012767 252 FPEHKYEIVKHLQAR----NHICGMIGNGVNDAPALKKA--------DIGIAVADATDAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 252 ~P~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~A--------dvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i 319 (456)
.+.+|...++.+.++ ...++|+||+.||.+|++.+ ..||+|+.+ ..+..|++++. +...+..++
T Consensus 164 ~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g--~~~~~A~~~~~--~~~~v~~~L 239 (244)
T TIGR00685 164 RFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG--SKKTVAKFHLT--GPQQVLEFL 239 (244)
T ss_pred CCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC--CcCCCceEeCC--CHHHHHHHH
Confidence 345788887776654 34799999999999999999 578888533 24567888885 455555444
No 141
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=95.09 E-value=0.11 Score=59.08 Aligned_cols=37 Identities=8% Similarity=-0.020 Sum_probs=31.2
Q ss_pred CCCcchHHHHHHH-HhCCCeEEEEcCCcHHHHHHHHHH
Q 012767 175 PPIHDSAETIRRA-LSLGLGVKMITGDQLAIAKETGRR 211 (456)
Q Consensus 175 ~~r~~~~~~I~~l-~~~Gi~v~miTGD~~~~a~~ia~~ 211 (456)
.|-+++.+++++| ++.|+.|+++||.........-..
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 5667899999997 788999999999999888766543
No 142
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.07 E-value=0.11 Score=60.44 Aligned_cols=125 Identities=16% Similarity=0.211 Sum_probs=79.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc--
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP-- 253 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P-- 253 (456)
+.|++.+.++.|+++|+++.++|+-....+...-+.+|+....+ ..++.+++ +....|
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~F-d~iv~~~~-------------------~~~~KP~P 221 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMF-DAIVSADA-------------------FENLKPAP 221 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHC-CEEEECcc-------------------cccCCCCH
Confidence 57899999999999999999999999988888888898852111 11121111 111122
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCee-EEeccc---cHHHhhcccEEeeCCCchHHHHHHH
Q 012767 254 EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIG-IAVADA---TDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 254 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~~~---~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
+-=...++.+.-....++||||..+|+.+-+.|++- |++..+ .+.....+|+++.+..--.+..++.
T Consensus 222 e~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~ 292 (1057)
T PLN02919 222 DIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILT 292 (1057)
T ss_pred HHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHh
Confidence 211334455554556799999999999999999984 333322 2233456778875533223344433
No 143
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=95.01 E-value=0.066 Score=50.89 Aligned_cols=100 Identities=14% Similarity=0.103 Sum_probs=64.5
Q ss_pred cCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhC---CCCCCCCCccccCCchhhhhhcCChHHHHhhcccc
Q 012767 172 LFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG---MGTNMYPSSALSGQDRDESIVALPVDELIEKADGF 248 (456)
Q Consensus 172 l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lG---i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ 248 (456)
+.-++.||+.++++.|++.|+++.++|.........+-+..+ +..- +. ..+ + ..+.
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~-f~-~~f--------------d-----~~~g 150 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY-FS-GYF--------------D-----TTVG 150 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh-cc-eEE--------------E-----eCcc
Confidence 345689999999999999999999999988776666655542 2110 00 000 0 0001
Q ss_pred cccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEe
Q 012767 249 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 292 (456)
Q Consensus 249 a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~ 292 (456)
..-.|+-=..+++.+.-....++|+||...|+.|-++||+-...
T Consensus 151 ~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 151 LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 11112222344555544456799999999999999999987544
No 144
>PLN03017 trehalose-phosphatase
Probab=94.91 E-value=0.54 Score=48.00 Aligned_cols=63 Identities=10% Similarity=0.030 Sum_probs=45.3
Q ss_pred HHHHHHHccCeeeEEeeeecCCCCcCCCCCCceEeEecccCC--CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH
Q 012767 133 VINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFD--PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG 209 (456)
Q Consensus 133 ~i~~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d--~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia 209 (456)
.+..++....+.+++-|++ +++-+..-.| .+-+++.++|++|. .|+.|.++||........+.
T Consensus 102 ~~~~~~~~k~~llflD~DG-------------TL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 102 QIMEASRGKQIVMFLDYDG-------------TLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred HHHHHhcCCCeEEEEecCC-------------cCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 3444555555666665654 6665554333 36789999999999 78999999999999888773
No 145
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=94.88 E-value=0.1 Score=47.25 Aligned_cols=94 Identities=6% Similarity=-0.004 Sum_probs=57.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHH------------HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHh
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLA------------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIE 243 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~------------~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 243 (456)
+-|++.++++.|++.|+++.++|..... .+..+.+.+|+.. ..++.+...
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~----~~ii~~~~~-------------- 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI----QVLAATHAG-------------- 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE----EEEEecCCC--------------
Confidence 3489999999999999999999975542 3456677888742 111111100
Q ss_pred hcccccccCchhHHHHHHHHh--hcCCEEEEecCCC--------CchhhhhhcCeeE
Q 012767 244 KADGFAGVFPEHKYEIVKHLQ--ARNHICGMIGNGV--------NDAPALKKADIGI 290 (456)
Q Consensus 244 ~~~v~a~~~P~~K~~iV~~lq--~~g~~v~~iGDG~--------ND~~aLk~AdvGI 290 (456)
.+..-.|+-=..+.+.+. -....++||||.. +|+.+-++|++-.
T Consensus 105 ---~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 ---LYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred ---CCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 000111111123333333 2335699999986 6999988887653
No 146
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=94.83 E-value=0.1 Score=45.07 Aligned_cols=39 Identities=10% Similarity=0.103 Sum_probs=34.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC-cHHHHHHHHHHhC
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGD-QLAIAKETGRRLG 213 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD-~~~~a~~ia~~lG 213 (456)
++.+++.++++.|++.|+++.++|+- ....+..+-+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68899999999999999999999999 7777777666666
No 147
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=94.77 E-value=0.064 Score=50.47 Aligned_cols=97 Identities=12% Similarity=0.177 Sum_probs=62.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++.| ++++.++|+.....+...-+..|+.... +..++.+.+.. ...-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~-----------------~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQ-----------------RWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcC-----------------CCCCChH
Confidence 4568999999988 5999999999888888777788875321 11112111000 0011122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEe
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 292 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~ 292 (456)
-=..+.+.+.-....|+||||..+|+.+-+.||+....
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 22233344443345699999999999999999988753
No 148
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=94.41 E-value=0.11 Score=43.04 Aligned_cols=48 Identities=21% Similarity=0.304 Sum_probs=35.8
Q ss_pred EecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH---HHhCCC
Q 012767 168 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRLGMG 215 (456)
Q Consensus 168 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia---~~lGi~ 215 (456)
|++...+.+=|++.++|+.|++.|++++++|.....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 455567778899999999999999999999998866555444 556764
No 149
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=94.40 E-value=0.077 Score=49.54 Aligned_cols=98 Identities=11% Similarity=0.043 Sum_probs=56.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHH--HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhccccccc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAI--AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 251 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~--a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~ 251 (456)
-++.|++.++++.|++.|+++.++|...... ........++... ++ .++...+ .....-
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~-fd-~v~~s~~-----------------~~~~KP 153 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL-FD-AVVESCL-----------------EGLRKP 153 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh-CC-EEEEeee-----------------cCCCCC
Confidence 3578999999999999999999999865432 2222222333210 00 0000000 000111
Q ss_pred CchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeE
Q 012767 252 FPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 290 (456)
Q Consensus 252 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI 290 (456)
.|+-=..+++.+.-....++||||...|+.+-++||+-.
T Consensus 154 ~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 154 DPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 122112333444434466999999999999999998853
No 150
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=94.36 E-value=0.12 Score=48.36 Aligned_cols=139 Identities=17% Similarity=0.275 Sum_probs=80.9
Q ss_pred hhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCC-eEEEEcCCcHHHH
Q 012767 127 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GVKMITGDQLAIA 205 (456)
Q Consensus 127 ~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi-~v~miTGD~~~~a 205 (456)
.+.....++++.++|.|.--+. -+.=.=|+-|+..++|+.+++.|- .++++|--|.-..
T Consensus 56 ne~M~rv~k~Lheqgv~~~~ik--------------------~~~r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFI 115 (256)
T KOG3120|consen 56 NELMDRVFKELHEQGVRIAEIK--------------------QVLRSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFI 115 (256)
T ss_pred HHHHHHHHHHHHHcCCCHHHHH--------------------HHHhcCCCCccHHHHHHHHHhCCCceEEEEecCchhHH
Confidence 3455667778888886643221 111122567899999999999996 9999999998888
Q ss_pred HHHHHHhCCCCC---CC-CCccccCCchhhhhhcCChHHHHhhcccccccCchh--HHHHHHHHhhc-------CCEEEE
Q 012767 206 KETGRRLGMGTN---MY-PSSALSGQDRDESIVALPVDELIEKADGFAGVFPEH--KYEIVKHLQAR-------NHICGM 272 (456)
Q Consensus 206 ~~ia~~lGi~~~---~~-~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~--K~~iV~~lq~~-------g~~v~~ 272 (456)
..+-+..|+..- ++ +...+.... .+.-.+.. ..--|...|.. |..++..++.. ...+.+
T Consensus 116 e~~Lea~~~~d~F~~IfTNPa~~da~G---~L~v~pyH-----~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iY 187 (256)
T KOG3120|consen 116 EEILEAAGIHDLFSEIFTNPACVDASG---RLLVRPYH-----TQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIY 187 (256)
T ss_pred HHHHHHccHHHHHHHHhcCCcccCCCC---cEEeecCC-----CCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEE
Confidence 888888776421 00 000000000 00000000 00113334443 66666655433 237999
Q ss_pred ecCCCCch-hhhhhcCeeEEec
Q 012767 273 IGNGVNDA-PALKKADIGIAVA 293 (456)
Q Consensus 273 iGDG~ND~-~aLk~AdvGIa~~ 293 (456)
+|||.||. |+++....-+||-
T Consensus 188 vGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 188 VGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred EcCCCCCcCcchhcccCceecc
Confidence 99999996 7777666666664
No 151
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=94.31 E-value=0.13 Score=49.05 Aligned_cols=88 Identities=18% Similarity=0.273 Sum_probs=55.5
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHH---HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhccccc
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAI---AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFA 249 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~---a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a 249 (456)
.-|+-|++.++++.|++.|++|+++||..... +..--++.|++. +...++.+.+. .
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~--~~~LiLR~~~d-------------------~ 176 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG--WKHLILRGLED-------------------S 176 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC--cCeeeecCCCC-------------------C
Confidence 34778999999999999999999999999755 333334567652 11122221000 0
Q ss_pred ccC-chhHHHHHHHHhhcCC-EEEEecCCCCchh
Q 012767 250 GVF-PEHKYEIVKHLQARNH-ICGMIGNGVNDAP 281 (456)
Q Consensus 250 ~~~-P~~K~~iV~~lq~~g~-~v~~iGDG~ND~~ 281 (456)
+.+ .+-|.+.-+.+.+.|+ +++.+||-.+|..
T Consensus 177 ~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 177 NKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred CchHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 000 1126666666666655 5777999999874
No 152
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=93.64 E-value=0.19 Score=46.61 Aligned_cols=95 Identities=8% Similarity=-0.016 Sum_probs=57.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH-HHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG-RRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP 253 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia-~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P 253 (456)
++.|++.++++.|++.|+++.++|.-+.......- ...++... + ..++...+ +....|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~-f-d~v~~s~~-------------------~~~~KP 142 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA-A-DHIYLSQD-------------------LGMRKP 142 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh-c-CEEEEecc-------------------cCCCCC
Confidence 46899999999999999999999997765443322 11233210 0 00111000 001122
Q ss_pred h--hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeE
Q 012767 254 E--HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 290 (456)
Q Consensus 254 ~--~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI 290 (456)
. -=..+++.+.-....+++|||...|+.+-++||+-.
T Consensus 143 ~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 143 EARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 1 112334444444567999999999999999998854
No 153
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=93.13 E-value=0.24 Score=49.83 Aligned_cols=91 Identities=13% Similarity=0.060 Sum_probs=66.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH----hCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR----LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 250 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~----lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~ 250 (456)
++.+++.++|+.|++.|+.+.++|.-+...+..+-+. +|+.... .+..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f----------------------------~~~~ 82 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF----------------------------DARS 82 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe----------------------------eEEE
Confidence 3578999999999999999999999999999988887 6664210 0011
Q ss_pred cCchhHHHHHHH----HhhcCCEEEEecCCCCchhhhhhcCeeEEec
Q 012767 251 VFPEHKYEIVKH----LQARNHICGMIGNGVNDAPALKKADIGIAVA 293 (456)
Q Consensus 251 ~~P~~K~~iV~~----lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~ 293 (456)
..+..|.+.++. +.-....++||||...|..+.+.+...+.+-
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 223344444433 3333467999999999999999988876553
No 154
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=93.10 E-value=0.33 Score=45.61 Aligned_cols=38 Identities=16% Similarity=0.123 Sum_probs=34.0
Q ss_pred chHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 012767 179 DSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 216 (456)
Q Consensus 179 ~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~ 216 (456)
.+.+.+.+|+++|++|+.+|......-..+-+.+|+..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~ 64 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQG 64 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCC
Confidence 46789999999999999999999888888989999873
No 155
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=92.59 E-value=0.27 Score=44.82 Aligned_cols=91 Identities=14% Similarity=0.149 Sum_probs=58.8
Q ss_pred hHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHH
Q 012767 180 SAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEI 259 (456)
Q Consensus 180 ~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~i 259 (456)
..+++..|++. +++.++|+.....+...-+.+|+.... ..++.+++. ....-.|+-=...
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f--d~i~~~~~~-----------------~~~KP~p~~~~~~ 151 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF--DAVVAADDV-----------------QHHKPAPDTFLRC 151 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc--eEEEehhhc-----------------cCCCCChHHHHHH
Confidence 36889998765 899999999999999988999985321 112211110 0111112222333
Q ss_pred HHHHhhcCCEEEEecCCCCchhhhhhcCeeE
Q 012767 260 VKHLQARNHICGMIGNGVNDAPALKKADIGI 290 (456)
Q Consensus 260 V~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI 290 (456)
.+.++-....|++|||..+|+.+-+.||+-.
T Consensus 152 ~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 152 AQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred HHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 4444444456999999999999999998753
No 156
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=92.27 E-value=0.22 Score=45.35 Aligned_cols=98 Identities=11% Similarity=0.072 Sum_probs=61.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.+++.++++.|+ .++.++|+-....+....+.+|+... ++ .++.+.+.... ..++.-.|+
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~-fd-~i~~~~~~~~~-------------~~~~KP~p~ 145 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDC-FD-GIFCFDTANPD-------------YLLPKPSPQ 145 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhh-hC-eEEEeecccCc-------------cCCCCCCHH
Confidence 36789999999987 47899999988888888899998531 11 11111100000 000011122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeE
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGI 290 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI 290 (456)
-=..+++.+......++||||...|+.+-+.||+..
T Consensus 146 ~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 146 AYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 223444555555677999999999999999988753
No 157
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=92.06 E-value=0.64 Score=42.23 Aligned_cols=107 Identities=16% Similarity=0.153 Sum_probs=78.1
Q ss_pred HHHccCeeeEEeeeecCCCCcCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCe--EEEEcCC-------cHHHHHH
Q 012767 137 FAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLG--VKMITGD-------QLAIAKE 207 (456)
Q Consensus 137 ~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~--v~miTGD-------~~~~a~~ 207 (456)
+.+.|.+.+.+-.+. ++ ...=++.+-|+..+.+++|++.+.. |+++|.- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 677888888775543 11 1134677889999999999998874 9999986 4788999
Q ss_pred HHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhc-----CCEEEEecCCC-Cchh
Q 012767 208 TGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQAR-----NHICGMIGNGV-NDAP 281 (456)
Q Consensus 208 ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~-----g~~v~~iGDG~-ND~~ 281 (456)
+.+.+|++- -.+....|.-..++.+.++.+ .+.++||||-. .|+-
T Consensus 101 ~~~~lgIpv-----------------------------l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-----------------------------LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-----------------------------EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999851 013345676666788888755 56799999974 7877
Q ss_pred hhhhcC
Q 012767 282 ALKKAD 287 (456)
Q Consensus 282 aLk~Ad 287 (456)
+=...+
T Consensus 152 ~gN~~G 157 (168)
T PF09419_consen 152 MGNRMG 157 (168)
T ss_pred HhhccC
Confidence 666655
No 158
>PLN02645 phosphoglycolate phosphatase
Probab=91.73 E-value=0.41 Score=47.92 Aligned_cols=48 Identities=25% Similarity=0.304 Sum_probs=37.7
Q ss_pred EecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH---HHhCCC
Q 012767 168 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRLGMG 215 (456)
Q Consensus 168 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia---~~lGi~ 215 (456)
|++.-.+.+=|++.++|+.|++.|++++++|+....+...+. +.+|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 444445566799999999999999999999999977666666 456663
No 159
>PHA02597 30.2 hypothetical protein; Provisional
Probab=91.45 E-value=0.41 Score=44.09 Aligned_cols=93 Identities=11% Similarity=0.053 Sum_probs=54.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCC--CCCccccCCchhhhhhcCChHHHHhhcccccccC
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNM--YPSSALSGQDRDESIVALPVDELIEKADGFAGVF 252 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~--~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~ 252 (456)
++.|++.++++.|++.+ +.+++|.-+.......-+.+|+..-. +-..++.++ ...
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~----------------------~~~ 130 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCG----------------------HDE 130 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEec----------------------cCc
Confidence 36889999999999875 56677765544444444556653100 000111110 111
Q ss_pred chhHHHHHHHH-hhcC-CEEEEecCCCCchhhhhhc--CeeEEe
Q 012767 253 PEHKYEIVKHL-QARN-HICGMIGNGVNDAPALKKA--DIGIAV 292 (456)
Q Consensus 253 P~~K~~iV~~l-q~~g-~~v~~iGDG~ND~~aLk~A--dvGIa~ 292 (456)
| |.+++... .+.| ..++||||..+|+.+-++| |+-...
T Consensus 131 ~--kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~ 172 (197)
T PHA02597 131 S--KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIH 172 (197)
T ss_pred c--cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEE
Confidence 2 23333322 2222 4688999999999999999 886443
No 160
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=90.23 E-value=4.2 Score=43.44 Aligned_cols=98 Identities=15% Similarity=0.083 Sum_probs=62.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHH-hCCCC----CCC--CCccccCCchhhhhhcCChHHHHhhcccc
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRR-LGMGT----NMY--PSSALSGQDRDESIVALPVDELIEKADGF 248 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~-lGi~~----~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~v~ 248 (456)
+++++.+. +++.|. ++++|+-....+..++++ +|++. +.. ....++|.-.. -
T Consensus 111 l~~~a~~~---~~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g-----------------~ 169 (497)
T PLN02177 111 VHPETWRV---FNSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKK-----------------P 169 (497)
T ss_pred cCHHHHHH---HHhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecC-----------------C
Confidence 56665554 455775 499999999999999987 88862 100 01111211000 0
Q ss_pred cccCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEecc
Q 012767 249 AGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVAD 294 (456)
Q Consensus 249 a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~ 294 (456)
..+.-++|..-++..........+.||+.||.|||+.|+-+.++..
T Consensus 170 ~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 170 GVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 0134467877776433211223789999999999999999999975
No 161
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=90.19 E-value=0.81 Score=43.38 Aligned_cols=101 Identities=15% Similarity=0.152 Sum_probs=72.3
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccC
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVF 252 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~ 252 (456)
.-++.|++.++++.|+..|+.+.+.|+-....+..+...+|+.... ..++.+.+.. -..-.
T Consensus 84 ~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f--~~~v~~~dv~-----------------~~KP~ 144 (221)
T COG0637 84 GLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF--DVIVTADDVA-----------------RGKPA 144 (221)
T ss_pred CCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc--chhccHHHHh-----------------cCCCC
Confidence 3468899999999999999999999999999999999999986321 1122211110 11222
Q ss_pred chhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEe
Q 012767 253 PEHKYEIVKHLQARNHICGMIGNGVNDAPALKKADIGIAV 292 (456)
Q Consensus 253 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~ 292 (456)
|+-=....+.|.-....|+.+.|..|.+.|-++|+.-+-.
T Consensus 145 Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~ 184 (221)
T COG0637 145 PDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVG 184 (221)
T ss_pred CHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEE
Confidence 3333455566555567899999999999999999976544
No 162
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=89.87 E-value=0.71 Score=44.15 Aligned_cols=89 Identities=22% Similarity=0.205 Sum_probs=55.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHH---HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhccccccc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLA---IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 251 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~---~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~ 251 (456)
++=|++.+.++.+++.|++|+.+||+... .+..--++.|+... +..++.+.... -...
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~--~~l~lr~~~~~-----------------~~~~ 175 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW--DHLILRPDKDP-----------------SKKS 175 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB--SCGEEEEESST-----------------SS--
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc--chhcccccccc-----------------cccc
Confidence 45578999999999999999999998864 22333456675421 11111111100 0001
Q ss_pred CchhHHHHHHHHhhcCC-EEEEecCCCCchhh
Q 012767 252 FPEHKYEIVKHLQARNH-ICGMIGNGVNDAPA 282 (456)
Q Consensus 252 ~P~~K~~iV~~lq~~g~-~v~~iGDG~ND~~a 282 (456)
..+-|...-+.++++|+ +++++||..+|...
T Consensus 176 ~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 176 AVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ----SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 12347778888888854 57789999999875
No 163
>PLN02423 phosphomannomutase
Probab=89.33 E-value=0.4 Score=46.29 Aligned_cols=48 Identities=27% Similarity=0.385 Sum_probs=39.2
Q ss_pred ccCc--hhHHHHHHHHhhcCCEEEEecC----CCCchhhhhh-cCeeEEeccccHH
Q 012767 250 GVFP--EHKYEIVKHLQARNHICGMIGN----GVNDAPALKK-ADIGIAVADATDA 298 (456)
Q Consensus 250 ~~~P--~~K~~iV~~lq~~g~~v~~iGD----G~ND~~aLk~-AdvGIa~~~~~~~ 298 (456)
++.| -+|+..++.|+ ....|+++|| |.||.+||+. -=.||+|.+-.|.
T Consensus 182 Di~~~gvnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~~ 236 (245)
T PLN02423 182 DVFPQGWDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDDT 236 (245)
T ss_pred EEeeCCCCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHHH
Confidence 4444 47999999999 7788999999 8999999996 7789998754443
No 164
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=89.33 E-value=1.1 Score=42.77 Aligned_cols=91 Identities=11% Similarity=0.089 Sum_probs=54.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++-|++.++++.|++. +++.++|..+... ...|+..-. ..++..++ +....|.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~~-----~~~gl~~~f--d~i~~~~~-------------------~~~~KP~ 165 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQP-----ELFGLGDYF--EFVLRAGP-------------------HGRSKPF 165 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCchH-----HHCCcHHhh--ceeEeccc-------------------CCcCCCc
Confidence 4668999999999875 8999999866541 455653210 01111000 0111222
Q ss_pred hH--HHHHHHHhhcCCEEEEecCC-CCchhhhhhcCeeEEe
Q 012767 255 HK--YEIVKHLQARNHICGMIGNG-VNDAPALKKADIGIAV 292 (456)
Q Consensus 255 ~K--~~iV~~lq~~g~~v~~iGDG-~ND~~aLk~AdvGIa~ 292 (456)
-. ..+++.+.-....++||||. ..|+.+-+.||+-...
T Consensus 166 p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 166 SDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 11 22233444345679999999 5999999999976543
No 165
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=89.12 E-value=1.5 Score=40.93 Aligned_cols=121 Identities=13% Similarity=0.190 Sum_probs=71.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++-+++.++++.++.. +++.++|.-.........+++|+... ++..+..+ -+....|.
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~-Fd~v~~s~--------------------~~g~~KP~ 156 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDY-FDAVFISE--------------------DVGVAKPD 156 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhh-hheEEEec--------------------ccccCCCC
Confidence 4567899999999888 99999999888888888899996531 11111111 01122232
Q ss_pred hH--HHHHHHHhhcCCEEEEecCCC-CchhhhhhcCee-EEecccc---HHHhhcccEEeeCCCchHHHHHH
Q 012767 255 HK--YEIVKHLQARNHICGMIGNGV-NDAPALKKADIG-IAVADAT---DAARSAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 255 ~K--~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvG-Ia~~~~~---~~a~~aaDivl~~~~l~~i~~~i 319 (456)
.+ ....+.+.-....++||||.. ||+..-+++|.- |-+.... .......+..+ .++..+..++
T Consensus 157 ~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i--~~l~~l~~~~ 226 (229)
T COG1011 157 PEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEI--SSLAELLDLL 226 (229)
T ss_pred cHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEE--cCHHHHHHHH
Confidence 22 233444444456799999975 886666666664 3333211 11114555555 3355555444
No 166
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=85.45 E-value=1.3 Score=39.83 Aligned_cols=85 Identities=15% Similarity=0.078 Sum_probs=51.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
++.|++.++++ ++.++|.-+........+.+|+.... ..++.+++. ....-.|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~~-----------------~~~KP~p~ 143 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF--DRAFSVDTV-----------------RAYKPDPV 143 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH--hhhccHhhc-----------------CCCCCCHH
Confidence 47889999998 36789998888888888888874211 011111100 01111122
Q ss_pred hHHHHHHHHhhcCCEEEEecCCCCchhhhhh
Q 012767 255 HKYEIVKHLQARNHICGMIGNGVNDAPALKK 285 (456)
Q Consensus 255 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~ 285 (456)
-=..+.+.+.-....++||||+..|+.+-++
T Consensus 144 ~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 144 VYELVFDTVGLPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred HHHHHHHHHCCCHHHeEeEecChhhHHHHhc
Confidence 1134445555455679999999999877654
No 167
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=84.81 E-value=5 Score=35.99 Aligned_cols=102 Identities=21% Similarity=0.178 Sum_probs=65.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHH---HHHh-----CCCCCCCCCccccCCc-hhhhhhcCChHHHHhh
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKET---GRRL-----GMGTNMYPSSALSGQD-RDESIVALPVDELIEK 244 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~i---a~~l-----Gi~~~~~~~~~l~g~~-~~~~~~~~~~~~~~~~ 244 (456)
|..++++.+..+.+++.|++++-+|+...-.+..+ -... +++. ..++...+ .-... .
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~----Gpv~~sP~~l~~al----------~ 91 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD----GPVLLSPDSLFSAL----------H 91 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC----CCEEECCcchhhhh----------h
Confidence 68999999999999999999999999996544333 2222 3321 11111100 00000 0
Q ss_pred cccccccCchhHHHHHHHHhhc-----CCEEEEecCCCCchhhhhhcCee
Q 012767 245 ADGFAGVFPEHKYEIVKHLQAR-----NHICGMIGNGVNDAPALKKADIG 289 (456)
Q Consensus 245 ~~v~a~~~P~~K~~iV~~lq~~-----g~~v~~iGDG~ND~~aLk~AdvG 289 (456)
-++..+-..+.|...++.++.. ...++..|...+|+.+.++++|.
T Consensus 92 rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 92 REVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 0123333346788888888764 34577889999999999998875
No 168
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=84.69 E-value=1.2 Score=40.19 Aligned_cols=92 Identities=15% Similarity=0.013 Sum_probs=60.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
..||++.+.++.|.+. +++++.|......|..+...++.....+. ..+.. .-...
T Consensus 42 ~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~-~~l~r-----------------------~~~~~ 96 (162)
T TIGR02251 42 FKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVIS-RRLYR-----------------------ESCVF 96 (162)
T ss_pred EECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEe-EEEEc-----------------------cccEE
Confidence 4799999999999887 99999999999999999999886431111 01110 00000
Q ss_pred hHHHHHHHHh---hcCCEEEEecCCCCchhhhhhcCeeEE
Q 012767 255 HKYEIVKHLQ---ARNHICGMIGNGVNDAPALKKADIGIA 291 (456)
Q Consensus 255 ~K~~iV~~lq---~~g~~v~~iGDG~ND~~aLk~AdvGIa 291 (456)
.|..+++.|. .....|+||||...|..+-+.++|-|.
T Consensus 97 ~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 97 TNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred eCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecC
Confidence 0111333333 334579999999988877666655543
No 169
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=84.27 E-value=4.1 Score=39.89 Aligned_cols=48 Identities=21% Similarity=0.265 Sum_probs=34.7
Q ss_pred EecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHH---HHHHhCCC
Q 012767 168 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKE---TGRRLGMG 215 (456)
Q Consensus 168 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~---ia~~lGi~ 215 (456)
|++.-.+.+-|++.++|++|++.|++++++|+....+... --+++|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 3344456677889999999999999999999976443333 23556764
No 170
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=84.00 E-value=5.8 Score=38.83 Aligned_cols=43 Identities=16% Similarity=0.329 Sum_probs=32.7
Q ss_pred CCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH---HHhCCC
Q 012767 173 FDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG---RRLGMG 215 (456)
Q Consensus 173 ~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia---~~lGi~ 215 (456)
..|+=|++.+..+.+++.|++|+++||.....-..+. ++.|+.
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~ 188 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYH 188 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCC
Confidence 4566789999999999999999999999864333333 345664
No 171
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=83.53 E-value=2 Score=41.69 Aligned_cols=118 Identities=14% Similarity=0.111 Sum_probs=64.7
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhc-----ccccccC
Q 012767 178 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA-----DGFAGVF 252 (456)
Q Consensus 178 ~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-----~v~a~~~ 252 (456)
++..++++.|++.++++.+.|+.........+...|+.. +.+.+... ..+..-.
T Consensus 123 ~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~---------------------~~~~i~~~~~~~~~~~gKP~ 181 (257)
T TIGR01458 123 QILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGP---------------------FVTALEYATDTKATVVGKPS 181 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchH---------------------HHHHHHHHhCCCceeecCCC
Confidence 678889999999999999999876543332222222210 00000000 0111112
Q ss_pred chhHHHHHHHHhhcCCEEEEecCCC-CchhhhhhcCeeEE-ecccc---H---HHhhcccEEeeCCCchHHHHH
Q 012767 253 PEHKYEIVKHLQARNHICGMIGNGV-NDAPALKKADIGIA-VADAT---D---AARSAADIVLTEPGLNVIITA 318 (456)
Q Consensus 253 P~~K~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvGIa-~~~~~---~---~a~~aaDivl~~~~l~~i~~~ 318 (456)
|+-=..+++.+......++||||.. +|+.+-+.+++--. +..|. . .....+|+++ +++..+..+
T Consensus 182 p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~--~sl~el~~~ 253 (257)
T TIGR01458 182 KTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTC--DSLPHAVDL 253 (257)
T ss_pred HHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEE--CCHHHHHHH
Confidence 2211233444444457799999996 99999998887543 33331 1 1123467777 446666544
No 172
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=83.24 E-value=24 Score=38.11 Aligned_cols=164 Identities=15% Similarity=0.109 Sum_probs=94.0
Q ss_pred chhhhHHHHHHHHHHHccC-eeeEEeeeecCCCCcCCCCCCceEeEecccCCCCCc-chHHHHHHHHhCCCeEEEEcCCc
Q 012767 124 SKIGRKVNAVINKFAERGL-RSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIH-DSAETIRRALSLGLGVKMITGDQ 201 (456)
Q Consensus 124 ~~~~~~~~~~i~~~~~~Gl-r~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~-~~~~~I~~l~~~Gi~v~miTGD~ 201 (456)
....+...+.++.+.++|. ++..+.-+. ....+.-..-+|+-.+.....| +-.+.+++++..| +.++..||.
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~-----~~~a~~i~~~lgi~~~f~~~~p~~K~~~i~~l~~~~-~~v~~vGDg 434 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDR-----RAVAERVARELGIDEVHAELLPEDKLEIVKELREKY-GPVAMVGDG 434 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCC-----HHHHHHHHHHcCChhhhhccCcHHHHHHHHHHHhcC-CEEEEEeCC
Confidence 3566778888999999999 766654321 0000000011222222222222 3466888888777 455567886
Q ss_pred HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEec-CCCCch
Q 012767 202 LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIG-NGVNDA 280 (456)
Q Consensus 202 ~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iG-DG~ND~ 280 (456)
..-+... +..+ .-+..| +| ..
T Consensus 435 ~nD~~al-------------------------------------------------------~~A~-vgia~g~~~--~~ 456 (536)
T TIGR01512 435 INDAPAL-------------------------------------------------------AAAD-VGIAMGASG--SD 456 (536)
T ss_pred HHHHHHH-------------------------------------------------------HhCC-EEEEeCCCc--cH
Confidence 6433222 2222 233445 33 33
Q ss_pred hhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhhHH
Q 012767 281 PALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELN--FLFTLD 358 (456)
Q Consensus 281 ~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~--~~~pl~ 358 (456)
.+...||+=+.-.+-.+. . ..+...-+.-|.+.+|+.+.+.|++..+.+++++.+.|++ ..+..+
T Consensus 457 ~~~~~ad~vl~~~~l~~l----~---------~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G~~~p~~aa~~m~~s 523 (536)
T TIGR01512 457 VAIETADVVLLNDDLSRL----P---------QAIRLARRTRRIVKQNVVIALGIILLLILLALFGVLPLWLAVLGHEGS 523 (536)
T ss_pred HHHHhCCEEEECCCHHHH----H---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHcCh
Confidence 445577765532211111 1 1133444556789999999999999999999999999977 456666
Q ss_pred HHHHHH
Q 012767 359 TVIAIL 364 (456)
Q Consensus 359 ~~~~l~ 364 (456)
++.+++
T Consensus 524 s~~v~~ 529 (536)
T TIGR01512 524 TVLVIL 529 (536)
T ss_pred HHHHHH
Confidence 666653
No 173
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=82.33 E-value=2.5 Score=41.88 Aligned_cols=41 Identities=7% Similarity=-0.016 Sum_probs=37.9
Q ss_pred CC-cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 012767 176 PI-HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 216 (456)
Q Consensus 176 ~r-~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~ 216 (456)
+| |++.++++.|++.|+++.++|+-....+...-+.+|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999999999999999999974
No 174
>PRK10444 UMP phosphatase; Provisional
Probab=81.26 E-value=1.7 Score=42.06 Aligned_cols=45 Identities=20% Similarity=0.316 Sum_probs=38.9
Q ss_pred EecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh
Q 012767 168 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL 212 (456)
Q Consensus 168 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~l 212 (456)
|++.-.+.+-|++.++|+.|++.|++++++|+....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 555556778899999999999999999999999998887777765
No 175
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=80.96 E-value=6 Score=40.18 Aligned_cols=37 Identities=11% Similarity=0.084 Sum_probs=34.3
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh-C
Q 012767 177 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL-G 213 (456)
Q Consensus 177 r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~l-G 213 (456)
-|++.++++.|++.|+++.++|+-....+..+.+.+ |
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 479999999999999999999999999999988886 6
No 176
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=80.93 E-value=2.9 Score=40.29 Aligned_cols=48 Identities=8% Similarity=0.016 Sum_probs=37.9
Q ss_pred EecccCCCCCcchHHHHHHHHhCCCeEEEEcC---CcHHHHHHHHHHhCCC
Q 012767 168 GLIPLFDPPIHDSAETIRRALSLGLGVKMITG---DQLAIAKETGRRLGMG 215 (456)
Q Consensus 168 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTG---D~~~~a~~ia~~lGi~ 215 (456)
|++.-.+.+-|++.++|++|++.|++++++|| ..........+.+|+.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 34444566667999999999999999999996 5677777777778874
No 177
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=80.47 E-value=16 Score=35.19 Aligned_cols=132 Identities=15% Similarity=0.114 Sum_probs=67.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCc--hh--hhhhcCChHHHHhhccccc
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQD--RD--ESIVALPVDELIEKADGFA 249 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~--~~--~~~~~~~~~~~~~~~~v~a 249 (456)
-.+|+++.+.++.|.+.+|++.|.|+.-.....++-++-|..... ..+..+- .+ ..+.+... +++ +
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~N---v~VvSN~M~Fd~~g~l~gF~~-~lI---H--- 158 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPN---VKVVSNFMDFDEDGVLVGFKG-PLI---H--- 158 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTT---EEEEEE-EEE-TTSBEEEE-S-S---------
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCC---eEEEeeeEEECCcceEeecCC-Cce---E---
Confidence 347999999999999999999999998888888888877643211 1111000 00 00000000 000 0
Q ss_pred ccCchhHHH-------HHHHHhhcCCEEEEecCCCCchhhhhhc---CeeEEec--cc-----cHHHhhcccEEeeCCCc
Q 012767 250 GVFPEHKYE-------IVKHLQARNHICGMIGNGVNDAPALKKA---DIGIAVA--DA-----TDAARSAADIVLTEPGL 312 (456)
Q Consensus 250 ~~~P~~K~~-------iV~~lq~~g~~v~~iGDG~ND~~aLk~A---dvGIa~~--~~-----~~~a~~aaDivl~~~~l 312 (456)
+-.|-+ .-+.++. ...|+-.||...|+.|-.-. +.-+.+| +. -+.-.++=|||+.++.=
T Consensus 159 ---~~NKn~~~l~~~~~~~~~~~-R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~t 234 (246)
T PF05822_consen 159 ---TFNKNESALEDSPYFKQLKK-RTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQT 234 (246)
T ss_dssp ---TT-HHHHHHTTHHHHHCTTT---EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B
T ss_pred ---EeeCCcccccCchHHHHhcc-CCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCC
Confidence 011111 1122322 45799999999999997655 4444455 32 22346788999997764
Q ss_pred hHHHHHH
Q 012767 313 NVIITAV 319 (456)
Q Consensus 313 ~~i~~~i 319 (456)
-.++..|
T Consensus 235 m~v~~~i 241 (246)
T PF05822_consen 235 MDVPNAI 241 (246)
T ss_dssp -HHHHHH
T ss_pred chHHHHH
Confidence 4444433
No 178
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=80.08 E-value=4.7 Score=43.37 Aligned_cols=40 Identities=15% Similarity=0.172 Sum_probs=32.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcH------------HHHHHHHHHhCCC
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQL------------AIAKETGRRLGMG 215 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~------------~~a~~ia~~lGi~ 215 (456)
+-|++.+.++.|++.|++++|+|.-.. ..+..+.+.+|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 468999999999999999999997444 3456677777774
No 179
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=79.62 E-value=2.4 Score=41.16 Aligned_cols=48 Identities=23% Similarity=0.376 Sum_probs=35.7
Q ss_pred EecccCCC----CCcchHHHHHHHHhCCCeEEEEcCCcHHHH---HHHHHHhCCC
Q 012767 168 GLIPLFDP----PIHDSAETIRRALSLGLGVKMITGDQLAIA---KETGRRLGMG 215 (456)
Q Consensus 168 G~i~l~d~----~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a---~~ia~~lGi~ 215 (456)
|++.-.+. +-|++.++|+.|++.|++++++||....+. ....+.+|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 34444455 788999999999999999999999877653 3344556764
No 180
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=79.43 E-value=3.5 Score=40.90 Aligned_cols=40 Identities=3% Similarity=-0.135 Sum_probs=36.6
Q ss_pred CC-cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 012767 176 PI-HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 215 (456)
Q Consensus 176 ~r-~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~ 215 (456)
+| |++.+++++|++.|+++.++|+.....+..+.+.+|+.
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~ 188 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLE 188 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCC
Confidence 46 89999999999999999999988888888999999996
No 181
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=74.70 E-value=56 Score=35.43 Aligned_cols=48 Identities=15% Similarity=0.007 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h--hhhhHHHHHHHHH
Q 012767 318 AVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLEL-N--FLFTLDTVIAILQ 365 (456)
Q Consensus 318 ~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~-~--~~~pl~~~~~l~~ 365 (456)
.-+.-+.+.+|+.+.+.|++..+.+++++.+.+. + ..++++++.++++
T Consensus 502 ~r~~~~~i~~nl~~a~~~N~~~i~~a~~g~~~p~~~aa~~m~~ss~~v~ln 552 (556)
T TIGR01525 502 SRKTRRIIKQNLAWALGYNLVAIPLAAGGLLPLWLLAVLLHEGSTVLVVLN 552 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHhchHHHHHHH
Confidence 3345577999999999999999999999999884 4 5667777766643
No 182
>PTZ00174 phosphomannomutase; Provisional
Probab=73.97 E-value=5.4 Score=38.32 Aligned_cols=35 Identities=20% Similarity=0.328 Sum_probs=30.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG 209 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia 209 (456)
++.+.+.++|+++++.|+++++.||++........
T Consensus 22 ~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l 56 (247)
T PTZ00174 22 PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQL 56 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 47889999999999999999999999988655433
No 183
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=73.94 E-value=50 Score=37.30 Aligned_cols=161 Identities=15% Similarity=0.070 Sum_probs=90.6
Q ss_pred chhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHH
Q 012767 124 SKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLA 203 (456)
Q Consensus 124 ~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~ 203 (456)
+..++...+.++.+.+.|.++..+.=+.-. ....=..-+|+-...+..-++=.+.|+++++.+ .++..||...
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~-----~a~~ia~~lgi~~~~~~~p~~K~~~v~~l~~~~--~v~mvGDgiN 639 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPR-----AAAAIAGELGIDFRAGLLPEDKVKAVTELNQHA--PLAMVGDGIN 639 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHH-----HHHHHHHHcCCCeecCCCHHHHHHHHHHHhcCC--CEEEEECCHH
Confidence 456677888899999999987655422100 000000112221112222224455788887543 5677888765
Q ss_pred HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCchhhh
Q 012767 204 IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDAPAL 283 (456)
Q Consensus 204 ~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aL 283 (456)
-+.+++ ..+ +-.++|+|. | .+.
T Consensus 640 DapAl~-------------------------------------------------------~A~-vgia~g~~~-~-~a~ 661 (741)
T PRK11033 640 DAPAMK-------------------------------------------------------AAS-IGIAMGSGT-D-VAL 661 (741)
T ss_pred hHHHHH-------------------------------------------------------hCC-eeEEecCCC-H-HHH
Confidence 444332 222 223446552 3 345
Q ss_pred hhcCeeEEeccccHHHhhcccEEeeCCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhhHHHH
Q 012767 284 KKADIGIAVADATDAARSAADIVLTEPGL-NVIITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELN--FLFTLDTV 360 (456)
Q Consensus 284 k~AdvGIa~~~~~~~a~~aaDivl~~~~l-~~i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~--~~~pl~~~ 360 (456)
..||+=+.-.+= ..+ ..+...-+.-+.+.+|+.+.+.|+++++.+++++.+.+.+ ..++.+++
T Consensus 662 ~~adivl~~~~l--------------~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g~~~~~~a~~~~~~ss~ 727 (741)
T PRK11033 662 ETADAALTHNRL--------------RGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLLGITGLWLAVLADSGATA 727 (741)
T ss_pred HhCCEEEecCCH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHcChHH
Confidence 667755533221 111 2233334455789999999999999999999988877765 44556666
Q ss_pred HHH
Q 012767 361 IAI 363 (456)
Q Consensus 361 ~~l 363 (456)
.++
T Consensus 728 ~v~ 730 (741)
T PRK11033 728 LVT 730 (741)
T ss_pred HHH
Confidence 555
No 184
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=73.90 E-value=1.2e+02 Score=34.16 Aligned_cols=162 Identities=15% Similarity=0.143 Sum_probs=99.8
Q ss_pred CchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCCCCceEeEecccCCCCCcch-HHHHHHHHhCCCeEEEEcCCc
Q 012767 123 KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDS-AETIRRALSLGLGVKMITGDQ 201 (456)
Q Consensus 123 ~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~~~-~~~I~~l~~~Gi~v~miTGD~ 201 (456)
.+.+++.-.+.++.+.++|++++-+.=+.- ..-+.+ -.-+|+--+.-.+.|+- .+.|++|++.|.+ ++.-||.
T Consensus 535 ~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~--~~A~~i---A~~lGId~v~AellPedK~~~V~~l~~~g~~-VamVGDG 608 (713)
T COG2217 535 ADELRPDAKEAIAALKALGIKVVMLTGDNR--RTAEAI---AKELGIDEVRAELLPEDKAEIVRELQAEGRK-VAMVGDG 608 (713)
T ss_pred eCCCChhHHHHHHHHHHCCCeEEEEcCCCH--HHHHHH---HHHcChHhheccCCcHHHHHHHHHHHhcCCE-EEEEeCC
Confidence 345677788899999999999766542210 000000 02255544555555544 5789999999854 4556998
Q ss_pred HHHHHHHHHH-hCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCCCCch
Q 012767 202 LAIAKETGRR-LGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNGVNDA 280 (456)
Q Consensus 202 ~~~a~~ia~~-lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~ 280 (456)
..-|-+++.. +| .++|-| .|+
T Consensus 609 INDAPALA~AdVG---------------------------------------------------------iAmG~G-tDv 630 (713)
T COG2217 609 INDAPALAAADVG---------------------------------------------------------IAMGSG-TDV 630 (713)
T ss_pred chhHHHHhhcCee---------------------------------------------------------EeecCC-cHH
Confidence 7777666541 22 234442 233
Q ss_pred hhhhhcCeeEEeccccHHHhhcccEEeeCCCchH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hhhH
Q 012767 281 PALKKADIGIAVADATDAARSAADIVLTEPGLNV-IITAVLISRAIFQRMRNYMVRGIDGLSSTEFIQVLELNF--LFTL 357 (456)
Q Consensus 281 ~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~-i~~~i~~~R~i~~~i~~~~~y~~~~~~~~i~l~~~~~~~--~~pl 357 (456)
++..|||=+-=++= .++.. +--.-+.-|.+.||+.+.+.|+.+.+..++++.+++.+. .+-+
T Consensus 631 -A~eaADvvL~~~dL--------------~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g~l~p~~A~~am~~ 695 (713)
T COG2217 631 -AIEAADVVLMRDDL--------------SAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGGLLTPWIAALAMSG 695 (713)
T ss_pred -HHHhCCEEEecCCH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHcc
Confidence 56677765432211 11222 223344567899999999999999999999998888773 4455
Q ss_pred HHHHHH
Q 012767 358 DTVIAI 363 (456)
Q Consensus 358 ~~~~~l 363 (456)
+++.++
T Consensus 696 SSv~Vv 701 (713)
T COG2217 696 SSVLVV 701 (713)
T ss_pred cHHHHH
Confidence 555554
No 185
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=71.64 E-value=4.7 Score=34.78 Aligned_cols=32 Identities=19% Similarity=0.306 Sum_probs=28.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHH
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIA 205 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a 205 (456)
+++.+++.++++.+++.|+.++++||.+....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 66889999999999999999999999987543
No 186
>PTZ00445 p36-lilke protein; Provisional
Probab=71.38 E-value=11 Score=35.49 Aligned_cols=64 Identities=13% Similarity=0.171 Sum_probs=46.5
Q ss_pred hhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCCCCceEeE------------ecccCCCCCcchHHHHHHHHhCCCeE
Q 012767 127 GRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIG------------LIPLFDPPIHDSAETIRRALSLGLGV 194 (456)
Q Consensus 127 ~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG------------~i~l~d~~r~~~~~~I~~l~~~Gi~v 194 (456)
.+..+..++.+.+.|.+++++-++. ++++ ...+--.++|+.+..+.+|++.||+|
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~Dn-------------TlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v 94 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFDL-------------TMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKI 94 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecchh-------------hhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeE
Confidence 4455667788999999999886643 3333 11122237999999999999999999
Q ss_pred EEEcCCcHH
Q 012767 195 KMITGDQLA 203 (456)
Q Consensus 195 ~miTGD~~~ 203 (456)
.++|=-...
T Consensus 95 ~VVTfSd~~ 103 (219)
T PTZ00445 95 SVVTFSDKE 103 (219)
T ss_pred EEEEccchh
Confidence 999965543
No 187
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=68.65 E-value=27 Score=34.17 Aligned_cols=68 Identities=19% Similarity=0.087 Sum_probs=47.0
Q ss_pred HHHHccCeeeEEeeeecCCCCcCCCCCCceEeEecccCCCCCcchHHHHHHHHhC-CCeEEEEcCCcHHHHHHHHHHhCC
Q 012767 136 KFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSL-GLGVKMITGDQLAIAKETGRRLGM 214 (456)
Q Consensus 136 ~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~-Gi~v~miTGD~~~~a~~ia~~lGi 214 (456)
.+....-|.+.+-|++ .+.-+..-+...++-++..+++++|... ...++|+||...........-.||
T Consensus 12 ~~~~a~~~~~~lDyDG-----------Tl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i 80 (266)
T COG1877 12 PYLNARKRLLFLDYDG-----------TLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGI 80 (266)
T ss_pred ccccccceEEEEeccc-----------cccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCc
Confidence 3444555666666654 3344555566777888999999999866 557999999999887766553333
No 188
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=67.61 E-value=11 Score=35.33 Aligned_cols=51 Identities=20% Similarity=0.348 Sum_probs=42.8
Q ss_pred eEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH---HhCCC
Q 012767 165 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR---RLGMG 215 (456)
Q Consensus 165 ~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~---~lGi~ 215 (456)
.+-|.+.++|..-|++.+++++|++++.+|..+|.-..+.-..+.+ +||+.
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 4679999999999999999999999999999999877766666554 45654
No 189
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=67.21 E-value=22 Score=32.66 Aligned_cols=103 Identities=13% Similarity=0.204 Sum_probs=54.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCc--hhhhhh--cCChHHHH--hhc-ccc
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQD--RDESIV--ALPVDELI--EKA-DGF 248 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~--~~~~~~--~~~~~~~~--~~~-~v~ 248 (456)
+.+++.+++..++++|++++|+|.= -||....++...+..-. ....+. ...++.+. ..+ ...
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQ-----------sGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph~p~~~ 100 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQ-----------SGIGRGYFTEADFDKLHNKMLKILASQGVKIDGILYCPHHPEDN 100 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECC-----------CCccccCccHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCC
Confidence 4689999999999999999999962 23332211111110000 000000 00111100 000 001
Q ss_pred cccCchhHHHHHHHHhhcC---CEEEEecCCCCchhhhhhcCee
Q 012767 249 AGVFPEHKYEIVKHLQARN---HICGMIGNGVNDAPALKKADIG 289 (456)
Q Consensus 249 a~~~P~~K~~iV~~lq~~g---~~v~~iGDG~ND~~aLk~AdvG 289 (456)
|.+---....+.+.+++.+ ....+|||-..|..+-..|++.
T Consensus 101 c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 101 CDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 2222222344555555543 6789999999999998888887
No 190
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=66.56 E-value=12 Score=34.28 Aligned_cols=90 Identities=27% Similarity=0.352 Sum_probs=58.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHH----HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhccccccc
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLA----IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGV 251 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~----~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~ 251 (456)
|++-++..|..-++.|=+|+.+||.... .++.+++...|. ++. .. +|+.-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~-~m~-pv------------------------~f~Gd 168 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHIT-NMN-PV------------------------IFAGD 168 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccC-CCc-ce------------------------eeccC
Confidence 5667788899889999999999999863 445666666663 221 11 23333
Q ss_pred Cc-hhHHHHHHHHhhcCCEEEEecCCCCchhhhhhcCe-eEEe
Q 012767 252 FP-EHKYEIVKHLQARNHICGMIGNGVNDAPALKKADI-GIAV 292 (456)
Q Consensus 252 ~P-~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv-GIa~ 292 (456)
.| -.++.-...+|+++ .-..-||+-||+.|-+.|++ ||-+
T Consensus 169 k~k~~qy~Kt~~i~~~~-~~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 169 KPKPGQYTKTQWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCCcccccccHHHHhcC-ceEEecCCchhhhHHHhcCccceeE
Confidence 22 11223344555554 45678999999999999975 4443
No 191
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=64.18 E-value=5.7 Score=37.96 Aligned_cols=92 Identities=15% Similarity=0.148 Sum_probs=50.5
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhc---c-cccccC
Q 012767 177 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA---D-GFAGVF 252 (456)
Q Consensus 177 r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~---~-v~a~~~ 252 (456)
-++..++++.+++.|++. ++|+.+...+.......|.+. +...++.. . .+..-.
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~---------------------~~~~i~~~g~~~~~~gKP~ 197 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGY---------------------YAELIKQLGGKVIYSGKPY 197 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccH---------------------HHHHHHHhCCcEecCCCCC
Confidence 378889999998899997 778766544433333333210 00111000 0 011111
Q ss_pred chhHHHHHHHHhhc-CCEEEEecCC-CCchhhhhhcCeeE
Q 012767 253 PEHKYEIVKHLQAR-NHICGMIGNG-VNDAPALKKADIGI 290 (456)
Q Consensus 253 P~~K~~iV~~lq~~-g~~v~~iGDG-~ND~~aLk~AdvGI 290 (456)
|+-=..+.+.+... ...++||||. .+|+.+=+.|++-.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 198 PAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred HHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 22112333444322 3479999999 59999988888753
No 192
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=61.79 E-value=28 Score=34.87 Aligned_cols=48 Identities=21% Similarity=0.248 Sum_probs=37.9
Q ss_pred EecccCCCCCcchHHHHHHHHhC----CCeEEEEcCCc---HH-HHHHHHHHhCCC
Q 012767 168 GLIPLFDPPIHDSAETIRRALSL----GLGVKMITGDQ---LA-IAKETGRRLGMG 215 (456)
Q Consensus 168 G~i~l~d~~r~~~~~~I~~l~~~----Gi~v~miTGD~---~~-~a~~ia~~lGi~ 215 (456)
|++.-.+++-+++.++++.|+.. |+++..+|-.. .. .+..+.+++|+.
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 66677788899999999999998 99999999665 22 355556778874
No 193
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=60.72 E-value=10 Score=37.13 Aligned_cols=46 Identities=22% Similarity=0.247 Sum_probs=38.8
Q ss_pred eEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHh
Q 012767 167 IGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRL 212 (456)
Q Consensus 167 lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~l 212 (456)
=|++.--+.+=|++.++|+.|+++|++++.+|.-...+...++.++
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 3677777888899999999999999999999998887777555544
No 194
>PLN02151 trehalose-phosphatase
Probab=60.63 E-value=18 Score=36.89 Aligned_cols=62 Identities=21% Similarity=0.234 Sum_probs=43.0
Q ss_pred hHHHHHHHHhhc-C------CEEEEecCCCCchhhhhhc-----CeeEEeccccHHHhhcccEEeeCCCchHHHHHHH
Q 012767 255 HKYEIVKHLQAR-N------HICGMIGNGVNDAPALKKA-----DIGIAVADATDAARSAADIVLTEPGLNVIITAVL 320 (456)
Q Consensus 255 ~K~~iV~~lq~~-g------~~v~~iGDG~ND~~aLk~A-----dvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~ 320 (456)
+|...|+.+.+. + ..++++||...|-.||+.. ++||-++.+.. ...|++.|.+ -..+..++.
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k--~T~A~y~L~d--p~eV~~~L~ 342 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK--ETNASYSLQE--PDEVMEFLE 342 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC--CCcceEeCCC--HHHHHHHHH
Confidence 899999888754 2 2489999999999999853 67787773321 2367787744 555554443
No 195
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=60.22 E-value=30 Score=31.46 Aligned_cols=40 Identities=18% Similarity=0.198 Sum_probs=31.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEc-CCcHHHHHHHHHHhCCC
Q 012767 176 PIHDSAETIRRALSLGLGVKMIT-GDQLAIAKETGRRLGMG 215 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miT-GD~~~~a~~ia~~lGi~ 215 (456)
+-|+++++++.|+..|+++.+.| -+.+..|+++-+.+++.
T Consensus 46 lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 46 LYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp --TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred eCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 45899999999999999999999 57899999999999986
No 196
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=59.69 E-value=15 Score=40.64 Aligned_cols=42 Identities=24% Similarity=0.178 Sum_probs=33.5
Q ss_pred chhHHHHHHHHhhc----CCEEEEe--cCCCCchhhhhhcCeeEEecc
Q 012767 253 PEHKYEIVKHLQAR----NHICGMI--GNGVNDAPALKKADIGIAVAD 294 (456)
Q Consensus 253 P~~K~~iV~~lq~~----g~~v~~i--GDG~ND~~aLk~AdvGIa~~~ 294 (456)
-.+|...++.|.+. ...|.++ |||.||.+||+.||+||+|++
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~ 658 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQR 658 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcC
Confidence 35788888888665 2335555 999999999999999999973
No 197
>PRK00208 thiG thiazole synthase; Reviewed
Probab=57.06 E-value=1.9e+02 Score=27.99 Aligned_cols=51 Identities=25% Similarity=0.281 Sum_probs=44.4
Q ss_pred CCCceEeEecccCCCCCcchHHHHHHHHhC---CCeEEEEcCCcHHHHHHHHHH
Q 012767 161 GSPWQFIGLIPLFDPPIHDSAETIRRALSL---GLGVKMITGDQLAIAKETGRR 211 (456)
Q Consensus 161 e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~---Gi~v~miTGD~~~~a~~ia~~ 211 (456)
+.+|.-+=+++=.+.+-||..++++.++.. |+.|+-.+-|++..|++++.-
T Consensus 90 ~~~~iKlEVi~d~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~~ 143 (250)
T PRK00208 90 GTNWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEA 143 (250)
T ss_pred CCCeEEEEEecCCCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 678888999988888999999999999999 999996777888888888754
No 198
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=56.54 E-value=4.8 Score=36.31 Aligned_cols=13 Identities=38% Similarity=0.368 Sum_probs=12.3
Q ss_pred EEcCcccccccCc
Q 012767 13 LCCDKTGTLTLNK 25 (456)
Q Consensus 13 i~~DKTGTLT~~~ 25 (456)
+|||.+||||.+.
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 6999999999998
No 199
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=55.51 E-value=40 Score=33.64 Aligned_cols=145 Identities=18% Similarity=0.230 Sum_probs=78.4
Q ss_pred cCCCCCcchHHHHHHHHhCCCe---EEEEcCCcHHHHH------HHHHHhCCCCCCCC--C-----------------cc
Q 012767 172 LFDPPIHDSAETIRRALSLGLG---VKMITGDQLAIAK------ETGRRLGMGTNMYP--S-----------------SA 223 (456)
Q Consensus 172 l~d~~r~~~~~~I~~l~~~Gi~---v~miTGD~~~~a~------~ia~~lGi~~~~~~--~-----------------~~ 223 (456)
+.++++.+.++.++.+++.|++ ..++-||+++... ..|+++||....+. . ..
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~ 91 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPS 91 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCC
Confidence 4556778888888888877775 3666787775443 35566787642110 0 00
Q ss_pred ccC--------Cchhh-----------hhh---cCChHHHHhhcccccccCchhHHHHHHHHhh--cCCEEEEecCC-CC
Q 012767 224 LSG--------QDRDE-----------SIV---ALPVDELIEKADGFAGVFPEHKYEIVKHLQA--RNHICGMIGNG-VN 278 (456)
Q Consensus 224 l~g--------~~~~~-----------~~~---~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~--~g~~v~~iGDG-~N 278 (456)
+.| ...++ ..+ ..+...+......|.=|+|..=.++++...- .|..++++|-| .-
T Consensus 92 V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~iv 171 (301)
T PRK14194 92 VNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQGRDVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIV 171 (301)
T ss_pred CCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCcc
Confidence 000 00000 000 0111122222233555666665666665543 38999999997 54
Q ss_pred chh---hhhhcCeeEEecc----ccHHHhhcccEEeeCCCchHHH
Q 012767 279 DAP---ALKKADIGIAVAD----ATDAARSAADIVLTEPGLNVII 316 (456)
Q Consensus 279 D~~---aLk~AdvGIa~~~----~~~~a~~aaDivl~~~~l~~i~ 316 (456)
-.| +|..++.-+.+-+ ....+...||+|++.-+-...+
T Consensus 172 G~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsavg~~~~v 216 (301)
T PRK14194 172 GKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAAVGRPRLI 216 (301)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEecCChhcc
Confidence 443 5667777776652 1233456789998754444333
No 200
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=55.48 E-value=23 Score=31.58 Aligned_cols=42 Identities=14% Similarity=0.023 Sum_probs=37.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 012767 174 DPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 216 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~ 216 (456)
=.+||++.+.++.|++. +++.+.|.-....|..+.+.++...
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~ 98 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG 98 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC
Confidence 34799999999999855 9999999999999999999998753
No 201
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=54.79 E-value=1.3e+02 Score=25.44 Aligned_cols=36 Identities=22% Similarity=0.326 Sum_probs=23.6
Q ss_pred HHHHHHHhhcCCEEEEecCCCC--chhhhhhcCeeEEec
Q 012767 257 YEIVKHLQARNHICGMIGNGVN--DAPALKKADIGIAVA 293 (456)
Q Consensus 257 ~~iV~~lq~~g~~v~~iGDG~N--D~~aLk~AdvGIa~~ 293 (456)
.++++.+ .+-+.+...|-|+| |..++++-+|-++-.
T Consensus 52 ~~~l~~~-~~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 52 AEVLEAA-PNLKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp HHHHHHH-TT-SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred HHHHhcc-ceeEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 4555666 33457888899997 667888877777754
No 202
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=50.96 E-value=16 Score=30.91 Aligned_cols=80 Identities=19% Similarity=0.234 Sum_probs=45.2
Q ss_pred HHHHHHHHccCeeeEEeeee--cCC-CCcCCC---CCCceEeEecccCCCCCcchHHHHHHHHhCCCe-EEEEcCCcHHH
Q 012767 132 AVINKFAERGLRSLAVAYQE--VPE-GSKESS---GSPWQFIGLIPLFDPPIHDSAETIRRALSLGLG-VKMITGDQLAI 204 (456)
Q Consensus 132 ~~i~~~~~~Glr~l~vA~~~--~~~-~~~~~~---e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~-v~miTGD~~~~ 204 (456)
..+..+.+.|++++.|.-+. +.. ..+.+. ..+..++=++. +.+.+.+.+++|.+.|++ +|+.+|...+.
T Consensus 18 ~v~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~e~p~~iDlavv~~----~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~ 93 (116)
T PF13380_consen 18 RVLRNLKAAGYEVYPVNPKGGEILGIKCYPSLAEIPEPIDLAVVCV----PPDKVPEIVDEAAALGVKAVWLQPGAESEE 93 (116)
T ss_dssp HHHHHHHHTT-EEEEESTTCSEETTEE-BSSGGGCSST-SEEEE-S-----HHHHHHHHHHHHHHT-SEEEE-TTS--HH
T ss_pred HHHHHHHhCCCEEEEECCCceEECcEEeeccccCCCCCCCEEEEEc----CHHHHHHHHHHHHHcCCCEEEEEcchHHHH
Confidence 34566666999988885432 111 011111 11222211111 445778999999999995 89999999999
Q ss_pred HHHHHHHhCCC
Q 012767 205 AKETGRRLGMG 215 (456)
Q Consensus 205 a~~ia~~lGi~ 215 (456)
+...+++.||.
T Consensus 94 ~~~~a~~~gi~ 104 (116)
T PF13380_consen 94 LIEAAREAGIR 104 (116)
T ss_dssp HHHHHHHTT-E
T ss_pred HHHHHHHcCCE
Confidence 99999998873
No 203
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=49.66 E-value=1.3e+02 Score=29.00 Aligned_cols=51 Identities=25% Similarity=0.292 Sum_probs=45.0
Q ss_pred CCCceEeEecccCCCCCcchHHHHHHHHhC---CCeEEEEcCCcHHHHHHHHHH
Q 012767 161 GSPWQFIGLIPLFDPPIHDSAETIRRALSL---GLGVKMITGDQLAIAKETGRR 211 (456)
Q Consensus 161 e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~---Gi~v~miTGD~~~~a~~ia~~ 211 (456)
+.+|.-+=+++=.+.+-||..++|+.++.. |+.|+-.+-|++..|++++.-
T Consensus 90 ~~~~iKlEVi~d~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~ 143 (248)
T cd04728 90 GTDWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA 143 (248)
T ss_pred CCCeEEEEEecCccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 578888889988888999999999999999 999997778889889888764
No 204
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=48.90 E-value=17 Score=34.44 Aligned_cols=56 Identities=25% Similarity=0.362 Sum_probs=28.7
Q ss_pred hHHHHHHHHhhc-C------CEEEEecCCCCchhhhhhc------CeeEEecccc-HHHhhcccEEeeCC
Q 012767 255 HKYEIVKHLQAR-N------HICGMIGNGVNDAPALKKA------DIGIAVADAT-DAARSAADIVLTEP 310 (456)
Q Consensus 255 ~K~~iV~~lq~~-g------~~v~~iGDG~ND~~aLk~A------dvGIa~~~~~-~~a~~aaDivl~~~ 310 (456)
.|...|+.+-+. + ..++++||...|-.|++.. +++|-++..+ -.-..+|++-+.+|
T Consensus 165 ~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~p 234 (235)
T PF02358_consen 165 NKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDDP 234 (235)
T ss_dssp -HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred ChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccccC
Confidence 499999877665 3 3699999999999998763 6677777543 22335566666554
No 205
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=48.33 E-value=81 Score=30.46 Aligned_cols=86 Identities=13% Similarity=0.061 Sum_probs=53.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHH----HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccc
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAI----AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAG 250 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~----a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~ 250 (456)
.+=||+.+.++..-+.|..|..+|.+..+. +..--++.|++....+...+.
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llk------------------------- 176 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLK------------------------- 176 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEe-------------------------
Confidence 345899999999999999999999988765 344445667753221111111
Q ss_pred cCchhHHHHHHHHhhcCCEEEEecCCCCchhhhhh
Q 012767 251 VFPEHKYEIVKHLQARNHICGMIGNGVNDAPALKK 285 (456)
Q Consensus 251 ~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~ 285 (456)
-.-..|..--+.+++-..+|+.+||..+|-.....
T Consensus 177 k~~k~Ke~R~~~v~k~~~iVm~vGDNl~DF~d~~~ 211 (274)
T COG2503 177 KDKKSKEVRRQAVEKDYKIVMLVGDNLDDFGDNAY 211 (274)
T ss_pred eCCCcHHHHHHHHhhccceeeEecCchhhhcchhh
Confidence 01112222223333456678889999998754433
No 206
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=47.04 E-value=20 Score=27.39 Aligned_cols=51 Identities=24% Similarity=0.355 Sum_probs=33.8
Q ss_pred HHHHHHhhcCCEEEEecCC-CCchhhhhhcCeeEEe-cc---ccHHH---hhcccEEee
Q 012767 258 EIVKHLQARNHICGMIGNG-VNDAPALKKADIGIAV-AD---ATDAA---RSAADIVLT 308 (456)
Q Consensus 258 ~iV~~lq~~g~~v~~iGDG-~ND~~aLk~AdvGIa~-~~---~~~~a---~~aaDivl~ 308 (456)
.+.+.+......++||||. ..|+.+-+++++--.. .. ..+.. ...+|+|+.
T Consensus 12 ~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~ 70 (75)
T PF13242_consen 12 QALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVD 70 (75)
T ss_dssp HHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEES
T ss_pred HHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEEC
Confidence 3445554445679999999 9999999999875443 22 22222 257888873
No 207
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=44.72 E-value=1.2e+02 Score=29.73 Aligned_cols=29 Identities=7% Similarity=0.227 Sum_probs=18.9
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCchhh
Q 012767 254 EHKYEIVKHLQARNHICGMIGNGVNDAPA 282 (456)
Q Consensus 254 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~a 282 (456)
++-.++++.+++.-..-+++|=|+|+...
T Consensus 188 ~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~ 216 (263)
T CHL00200 188 KKLKKLIETIKKMTNKPIILGFGISTSEQ 216 (263)
T ss_pred HHHHHHHHHHHHhcCCCEEEECCcCCHHH
Confidence 44456777777664555677888885543
No 208
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=44.60 E-value=69 Score=31.76 Aligned_cols=38 Identities=26% Similarity=0.307 Sum_probs=27.8
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHH-HHHHHHhCCC
Q 012767 178 HDSAETIRRALSLGLGVKMITGDQLAIA-KETGRRLGMG 215 (456)
Q Consensus 178 ~~~~~~I~~l~~~Gi~v~miTGD~~~~a-~~ia~~lGi~ 215 (456)
+++...-+.|+..|.+++++|......+ +...+.++..
T Consensus 63 ~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~~ 101 (291)
T PF14336_consen 63 PGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGLQ 101 (291)
T ss_pred HHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhhC
Confidence 4666677888899999999998776544 4555666654
No 209
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=43.63 E-value=71 Score=31.13 Aligned_cols=33 Identities=12% Similarity=0.161 Sum_probs=24.7
Q ss_pred HHHHHhhcCCEEEEecCCC-CchhhhhhcCeeEE
Q 012767 259 IVKHLQARNHICGMIGNGV-NDAPALKKADIGIA 291 (456)
Q Consensus 259 iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvGIa 291 (456)
+++.+.-....++||||.. .|+.+-+.|++--.
T Consensus 211 ~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si 244 (279)
T TIGR01452 211 ITENFSIDPARTLMVGDRLETDILFGHRCGMTTV 244 (279)
T ss_pred HHHHhCCChhhEEEECCChHHHHHHHHHcCCcEE
Confidence 4444444457899999995 99999999987643
No 210
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=42.90 E-value=92 Score=30.81 Aligned_cols=65 Identities=15% Similarity=0.257 Sum_probs=40.4
Q ss_pred cccccCchhHHHHHHHHhh--cCCEEEEecC-CCCchh---hhhhcCeeEEec--ccc--HHHhhcccEEeeCCC
Q 012767 247 GFAGVFPEHKYEIVKHLQA--RNHICGMIGN-GVNDAP---ALKKADIGIAVA--DAT--DAARSAADIVLTEPG 311 (456)
Q Consensus 247 v~a~~~P~~K~~iV~~lq~--~g~~v~~iGD-G~ND~~---aLk~AdvGIa~~--~~~--~~a~~aaDivl~~~~ 311 (456)
.|.=|+|..=.++++...- .|..++++|- |+--.| +|..++.-+.+- ... ......||+|+..-+
T Consensus 136 ~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~avg 210 (284)
T PRK14179 136 VMIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVAIG 210 (284)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEecC
Confidence 3556666665566665543 3889999999 555544 566666666654 222 233567899987543
No 211
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=42.41 E-value=87 Score=29.80 Aligned_cols=100 Identities=15% Similarity=0.128 Sum_probs=54.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhC-CCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCch
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLG-MGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPE 254 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lG-i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 254 (456)
+-||+.+.++.|+..|+++.++|+-+..++..--...+ +.. .+...++ |++.+-.. . ...|+
T Consensus 93 ~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~-~f~~~v~-~d~~~v~~-g--------------KP~Pd 155 (222)
T KOG2914|consen 93 LMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFK-NFSHVVL-GDDPEVKN-G--------------KPDPD 155 (222)
T ss_pred cCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHH-hcCCCee-cCCccccC-C--------------CCCch
Confidence 34599999999999999999999997665543333333 322 2222233 32221100 0 11122
Q ss_pred hHHHHHHHHhhcC-CEEEEecCCCCchhhhhhcCeeEEe
Q 012767 255 HKYEIVKHLQARN-HICGMIGNGVNDAPALKKADIGIAV 292 (456)
Q Consensus 255 ~K~~iV~~lq~~g-~~v~~iGDG~ND~~aLk~AdvGIa~ 292 (456)
-=....+.+.... ..|+.+.|..+-+.|-++|+.-+-+
T Consensus 156 i~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~ 194 (222)
T KOG2914|consen 156 IYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVG 194 (222)
T ss_pred HHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEE
Confidence 1123333444444 5666677766666666666654443
No 212
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=42.16 E-value=94 Score=28.06 Aligned_cols=107 Identities=18% Similarity=0.166 Sum_probs=63.5
Q ss_pred chHHHHHHHHhCCCeEEEEcCCcHHH-HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHH
Q 012767 179 DSAETIRRALSLGLGVKMITGDQLAI-AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKY 257 (456)
Q Consensus 179 ~~~~~I~~l~~~Gi~v~miTGD~~~~-a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~ 257 (456)
|.-.++..++..|-++.+++=.+... ...+...+|+.- ..+.--++++=.
T Consensus 65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i-----------------------------~~~~~~~~~e~~ 115 (176)
T PF06506_consen 65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDI-----------------------------KIYPYDSEEEIE 115 (176)
T ss_dssp HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EE-----------------------------EEEEESSHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCce-----------------------------EEEEECCHHHHH
Confidence 55566666666666777766655543 556666666531 123344566666
Q ss_pred HHHHHHhhcCCEEEEecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHHHHHHHHHHHH
Q 012767 258 EIVKHLQARNHICGMIGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISRAIFQRMRN 331 (456)
Q Consensus 258 ~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~~R~i~~~i~~ 331 (456)
..++.++..| .-+.+|++.- ...-+ +.--..++..++..+|..++.+++.+.+.+++
T Consensus 116 ~~i~~~~~~G-~~viVGg~~~-~~~A~---------------~~gl~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 116 AAIKQAKAEG-VDVIVGGGVV-CRLAR---------------KLGLPGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHHHHTT---EEEESHHH-HHHHH---------------HTTSEEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcC-CcEEECCHHH-HHHHH---------------HcCCcEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 7788887777 4556676531 11111 22334677788899999999999998887654
No 213
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=41.80 E-value=66 Score=30.91 Aligned_cols=103 Identities=17% Similarity=0.176 Sum_probs=57.6
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhH-
Q 012767 178 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHK- 256 (456)
Q Consensus 178 ~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K- 256 (456)
++..++++.||+.|..+.++|-=.... ..+-..+|+... +|.++..+.+ .-..|+-+
T Consensus 116 ~~~~~~lq~lR~~g~~l~iisN~d~r~-~~~l~~~~l~~~--------------------fD~vv~S~e~-g~~KPDp~I 173 (237)
T KOG3085|consen 116 DGMQELLQKLRKKGTILGIISNFDDRL-RLLLLPLGLSAY--------------------FDFVVESCEV-GLEKPDPRI 173 (237)
T ss_pred cHHHHHHHHHHhCCeEEEEecCCcHHH-HHHhhccCHHHh--------------------hhhhhhhhhh-ccCCCChHH
Confidence 455599999999998888888543322 244455555311 1111111110 01112211
Q ss_pred -HHHHHHHhhcCCEEEEecCC-CCchhhhhhcCee-EEeccccHHHhhc
Q 012767 257 -YEIVKHLQARNHICGMIGNG-VNDAPALKKADIG-IAVADATDAARSA 302 (456)
Q Consensus 257 -~~iV~~lq~~g~~v~~iGDG-~ND~~aLk~AdvG-Ia~~~~~~~a~~a 302 (456)
...++.+.-+..-|+++||. .||...-+.+|.- |-+.++....+..
T Consensus 174 f~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~~ 222 (237)
T KOG3085|consen 174 FQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKEL 222 (237)
T ss_pred HHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhhh
Confidence 23455555556679999996 6999988888764 3334444444433
No 214
>TIGR03849 arch_ComA phosphosulfolactate synthase. This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679.
Probab=40.82 E-value=54 Score=31.52 Aligned_cols=69 Identities=17% Similarity=0.196 Sum_probs=45.9
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHH----------HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcc
Q 012767 177 IHDSAETIRRALSLGLGVKMITGDQLAI----------AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD 246 (456)
Q Consensus 177 r~~~~~~I~~l~~~Gi~v~miTGD~~~~----------a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 246 (456)
+.-.++-|+.++++||.|. ||+.... -..-++++|+.. ++-.+
T Consensus 40 ~~~l~eki~la~~~~V~v~--~GGtl~E~~~~q~~~~~Yl~~~k~lGf~~-------------------------IEiS~ 92 (237)
T TIGR03849 40 RDIVKEKIEMYKDYGIKVY--PGGTLFEIAHSKGKFDEYLNECDELGFEA-------------------------VEISD 92 (237)
T ss_pred HHHHHHHHHHHHHcCCeEe--CCccHHHHHHHhhhHHHHHHHHHHcCCCE-------------------------EEEcC
Confidence 3457899999999998754 8874321 122556666531 11123
Q ss_pred cccccCchhHHHHHHHHhhcCCEEEE
Q 012767 247 GFAGVFPEHKYEIVKHLQARNHICGM 272 (456)
Q Consensus 247 v~a~~~P~~K~~iV~~lq~~g~~v~~ 272 (456)
.+-.+++++|.++|+..++.|-+|..
T Consensus 93 G~~~i~~~~~~rlI~~~~~~g~~v~~ 118 (237)
T TIGR03849 93 GSMEISLEERCNLIERAKDNGFMVLS 118 (237)
T ss_pred CccCCCHHHHHHHHHHHHhCCCeEec
Confidence 56678889999999999988766553
No 215
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=40.77 E-value=37 Score=32.26 Aligned_cols=48 Identities=25% Similarity=0.275 Sum_probs=33.6
Q ss_pred EecccCCCCCcchHHHHHHHHhCCCeEEEEc---CCcHHHHH-HHHHHhCCC
Q 012767 168 GLIPLFDPPIHDSAETIRRALSLGLGVKMIT---GDQLAIAK-ETGRRLGMG 215 (456)
Q Consensus 168 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miT---GD~~~~a~-~ia~~lGi~ 215 (456)
|++.-.+.+=|++.++|+.+++.|++++++| |....... .+.+..|+.
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 4444556667799999999999999999999 44444333 333335663
No 216
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=40.11 E-value=82 Score=28.60 Aligned_cols=59 Identities=12% Similarity=0.125 Sum_probs=40.9
Q ss_pred hhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHH
Q 012767 126 IGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIA 205 (456)
Q Consensus 126 ~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a 205 (456)
....+...++.+...|--.++++.-+ --+++.++++.+++.|+.|+.+||.+-..-
T Consensus 95 yd~vFsRqveA~g~~GDvLigISTSG------------------------NS~nVl~Ai~~Ak~~gm~vI~ltG~~GG~~ 150 (176)
T COG0279 95 YDEVFSRQVEALGQPGDVLIGISTSG------------------------NSKNVLKAIEAAKEKGMTVIALTGKDGGKL 150 (176)
T ss_pred HHHHHHHHHHhcCCCCCEEEEEeCCC------------------------CCHHHHHHHHHHHHcCCEEEEEecCCCccc
Confidence 44455566677777765555554322 246888999999999999999999986443
Q ss_pred HHH
Q 012767 206 KET 208 (456)
Q Consensus 206 ~~i 208 (456)
..+
T Consensus 151 ~~~ 153 (176)
T COG0279 151 AGL 153 (176)
T ss_pred ccc
Confidence 333
No 217
>cd01917 ACS_2 Acetyl-CoA synthase (ACS), also known as acetyl-CoA decarbonylase, is found in acetogenic and methanogenic organisms and is responsible for the synthesis and breakdown of acetyl-CoA. ACS forms a heterotetramer with carbon monoxide dehydrogenase (CODH) consisting of two ACS and two CODH subunits. CODH reduces carbon dioxide to carbon monoxide and ACS then synthesizes acetyl-CoA from carbon monoxide, CoA, and a methyl group donated by another protein (CoFeSP). ACS has three structural domains, an N-terminal rossman fold domain with a helical region at its N-terminus which interacts with CODH, and two alpha + beta fold domains. A Ni-Fe-S center referred to as the A-cluster is located in the C-terminal domain. A large cavity exists between the three domains which may bind CoA.
Probab=38.39 E-value=1.2e+02 Score=29.82 Aligned_cols=138 Identities=12% Similarity=0.188 Sum_probs=78.2
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhH
Q 012767 177 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHK 256 (456)
Q Consensus 177 r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K 256 (456)
.+++.+.++.+++.|+-+.+ +||-.....+-+.++|......|..-+... ..-..-.++-+.+|+++.|-+.
T Consensus 140 ~e~~~~I~~e~q~r~~lv~l-~G~i~~q~~E~G~~lg~~~~lvp~G~~ts~-------~H~~g~AiRaAliFggv~pGn~ 211 (287)
T cd01917 140 SKALKKIVDDLMGRGFMLFL-CDEIVEQLLEENVKLGLDYIAYPLGNFTQA-------IHAANYALRAGLMFGGIEPGKR 211 (287)
T ss_pred hHHHHHHHHHHHHCCcEEEE-ecHHHHHHHHcCCeeccceeEeecCchhhH-------HHHHHHHHHHHHHhCCCCCcCH
Confidence 35778899999999987654 675333333333445543221111100000 0001122334458999999989
Q ss_pred HHHHHHHhhc-CCEEEEecCCCCchhhhhh-----cCeeEEeccccHHHhhcccEEeeCCCchHHHHHHHHHH
Q 012767 257 YEIVKHLQAR-NHICGMIGNGVNDAPALKK-----ADIGIAVADATDAARSAADIVLTEPGLNVIITAVLISR 323 (456)
Q Consensus 257 ~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~-----AdvGIa~~~~~~~a~~aaDivl~~~~l~~i~~~i~~~R 323 (456)
.++....+++ +..|.+.| ...|..+--. .++.+-........+..-+.++.+++.+.++.-=.+.|
T Consensus 212 ~ei~dY~~nRV~Afv~A~G-~~s~~~~A~aaGai~~GfPVI~d~~~pei~~~P~~~~~~~~~d~iv~~alE~R 283 (287)
T cd01917 212 EEIRDYQRRRVRAFVLYLG-ELDMVKTAAAAGAIFTGFPVITDQELPEDKQIPDWFFSSSDYDKIVQNALEMR 283 (287)
T ss_pred HHHHHHHHhhcCEEEEecc-ccCHHHHHHHhhHHHcCCCEEeCCCCcccccCccceecCCCHHHHHHHHHHhc
Confidence 9999998887 88888998 4444322222 23333333333333345567888888888776544444
No 218
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=37.44 E-value=40 Score=28.08 Aligned_cols=80 Identities=16% Similarity=0.260 Sum_probs=53.6
Q ss_pred HHHHHccCeeeEEeeeecCCCCc--CCCCCCceEeEecccCCCCCcchHHHHHHHHhCCC-eE-EEEcCCcHHHHHHHHH
Q 012767 135 NKFAERGLRSLAVAYQEVPEGSK--ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GV-KMITGDQLAIAKETGR 210 (456)
Q Consensus 135 ~~~~~~Glr~l~vA~~~~~~~~~--~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi-~v-~miTGD~~~~a~~ia~ 210 (456)
.-+...|++|+.+..+ +|.++. .-.+.+..++|+-....+.-+.+++.++.+++.+- ++ +++-|-....-...++
T Consensus 21 ~~l~~~G~~V~~lg~~-~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~~~~~~ 99 (119)
T cd02067 21 RALRDAGFEVIDLGVD-VPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRDFKFLK 99 (119)
T ss_pred HHHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCCChhHHHHH
Confidence 3566799999776633 332211 11244567888888877777999999999999976 55 5666655444345778
Q ss_pred HhCCC
Q 012767 211 RLGMG 215 (456)
Q Consensus 211 ~lGi~ 215 (456)
.+|.+
T Consensus 100 ~~G~D 104 (119)
T cd02067 100 EIGVD 104 (119)
T ss_pred HcCCe
Confidence 88864
No 219
>PRK15108 biotin synthase; Provisional
Probab=36.80 E-value=3.8e+02 Score=27.17 Aligned_cols=116 Identities=11% Similarity=0.088 Sum_probs=63.7
Q ss_pred hHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCCCCceEeEecccCCC-CC--cchHHHHHHHHhCCCeEEEEcCCcHHH
Q 012767 128 RKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDP-PI--HDSAETIRRALSLGLGVKMITGDQLAI 204 (456)
Q Consensus 128 ~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~-~r--~~~~~~I~~l~~~Gi~v~miTGD~~~~ 204 (456)
+++.+....+.+.|.+-+++ ..+..+| .+ +...++++.+++.|+.+.+--|.-...
T Consensus 79 eEI~~~a~~~~~~G~~~i~i---------------------~~~g~~p~~~~~e~i~~~i~~ik~~~i~v~~s~G~ls~e 137 (345)
T PRK15108 79 EQVLESARKAKAAGSTRFCM---------------------GAAWKNPHERDMPYLEQMVQGVKAMGLETCMTLGTLSES 137 (345)
T ss_pred HHHHHHHHHHHHcCCCEEEE---------------------EecCCCCCcchHHHHHHHHHHHHhCCCEEEEeCCcCCHH
Confidence 44555566666777764432 2222344 33 567788999998898877555644444
Q ss_pred HHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHHHHHHHHhhcCCEEE---EecCCCCch
Q 012767 205 AKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICG---MIGNGVNDA 280 (456)
Q Consensus 205 a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~---~iGDG~ND~ 280 (456)
...--++.|+..-..+ +.. ..+.. ..+++.-+.+++.+.++..++.|..+. ++|=|..+-
T Consensus 138 ~l~~LkeAGld~~n~~---leT-----------~p~~f--~~I~~~~~~~~rl~~i~~a~~~G~~v~sg~i~GlgEt~e 200 (345)
T PRK15108 138 QAQRLANAGLDYYNHN---LDT-----------SPEFY--GNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVK 200 (345)
T ss_pred HHHHHHHcCCCEEeec---ccc-----------ChHhc--CCCCCCCCHHHHHHHHHHHHHcCCceeeEEEEeCCCCHH
Confidence 4444456677521000 000 00000 012333355778888888888876544 667766543
No 220
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=36.49 E-value=2.9e+02 Score=27.66 Aligned_cols=59 Identities=19% Similarity=0.250 Sum_probs=39.0
Q ss_pred HHHHccCeeeEEeeeecCCCCcCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 012767 136 KFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 215 (456)
Q Consensus 136 ~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~ 215 (456)
.+...|..++.+.-.++. +| ..+.=.|+..++.+. +..+|+-+....+...+|+..+++
T Consensus 65 a~~qlGg~~~~l~~~~~Q-------------lg----r~Esi~DTArVLsr~----~D~I~~R~~~~~~ve~lA~~s~VP 123 (310)
T COG0078 65 AATQLGGHAIYLGPGDSQ-------------LG----RGESIKDTARVLSRM----VDAIMIRGFSHETLEELAKYSGVP 123 (310)
T ss_pred HHHHcCCCeEEeCCCccc-------------cC----CCCcHHHHHHHHHhh----hheEEEecccHHHHHHHHHhCCCc
Confidence 345677777776544311 11 222334566666665 567899999999999999999885
No 221
>PRK10527 hypothetical protein; Provisional
Probab=36.30 E-value=54 Score=28.27 Aligned_cols=50 Identities=14% Similarity=0.018 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcccCccccchHHHHHHHHHhhhh
Q 012767 335 RGIDGLSSTEFIQVLELNFLFTLDTVIAILQTAFTSKKDFGKEERELLWAHAQRT 389 (456)
Q Consensus 335 y~~~~~~~~i~l~~~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (456)
|...|..+...+.++++++.+|.++.-++....|+.- +.|..+|-..|+.
T Consensus 6 ~~~lG~~~~~LG~iGi~LPlLPTTPFlLLAa~cfaRs-----SpR~~~WL~~h~~ 55 (125)
T PRK10527 6 LIIIGWLAVVLGTLGVVLPLLPTTPFILLAAWCFARS-----SPRFHAWLLYRSW 55 (125)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHcC-----CHHHHHHHHcCch
Confidence 6666777777788888899999999988855555432 3466666655543
No 222
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=34.89 E-value=2e+02 Score=28.45 Aligned_cols=45 Identities=16% Similarity=0.207 Sum_probs=31.8
Q ss_pred cCCCCCcchHHHHHHHHhCCCe---EEEEcCCcHHHH------HHHHHHhCCCC
Q 012767 172 LFDPPIHDSAETIRRALSLGLG---VKMITGDQLAIA------KETGRRLGMGT 216 (456)
Q Consensus 172 l~d~~r~~~~~~I~~l~~~Gi~---v~miTGD~~~~a------~~ia~~lGi~~ 216 (456)
+...++.+.++-++.++..|++ +.+..||+++.. ...|+++||..
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKS 63 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 3455677888888988877875 467788887544 34567788764
No 223
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=34.80 E-value=2.4e+02 Score=27.94 Aligned_cols=64 Identities=16% Similarity=0.201 Sum_probs=39.6
Q ss_pred cccccCchhHHHHHHHHhh--cCCEEEEecCCCCc----hhhhhh------cCeeEEeccccH--HHhhcccEEeeCC
Q 012767 247 GFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVND----APALKK------ADIGIAVADATD--AARSAADIVLTEP 310 (456)
Q Consensus 247 v~a~~~P~~K~~iV~~lq~--~g~~v~~iGDG~ND----~~aLk~------AdvGIa~~~~~~--~a~~aaDivl~~~ 310 (456)
.|.=|+|..=.++++.++- .|..++.+|-+..= +.+|.. |.|-++.....+ .....||+++..-
T Consensus 135 ~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~~~~ADIVI~Av 212 (286)
T PRK14184 135 GFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAEECREADFLFVAI 212 (286)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHHHHHhCCEEEEec
Confidence 3556677666666666543 38899999987422 235544 566666654333 3456789988653
No 224
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=33.73 E-value=43 Score=28.30 Aligned_cols=80 Identities=15% Similarity=0.123 Sum_probs=53.3
Q ss_pred HHHHHccCeeeEEeeeecCCCCc--CCCCCCceEeEecccCCCCCcchHHHHHHHHhCCC-eE-EEEcCCcHHHHHHHHH
Q 012767 135 NKFAERGLRSLAVAYQEVPEGSK--ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GV-KMITGDQLAIAKETGR 210 (456)
Q Consensus 135 ~~~~~~Glr~l~vA~~~~~~~~~--~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi-~v-~miTGD~~~~a~~ia~ 210 (456)
.-+...|++++.+... +|.+.. .-.+.+-.++++-.......+.+++.++.|++.|. ++ +++-|..+..-.+-.+
T Consensus 21 ~~l~~~G~~vi~lG~~-vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~ 99 (122)
T cd02071 21 RALRDAGFEVIYTGLR-QTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLK 99 (122)
T ss_pred HHHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHH
Confidence 3467889998887754 222111 01134457888888888888999999999999977 54 4455544443455566
Q ss_pred HhCCC
Q 012767 211 RLGMG 215 (456)
Q Consensus 211 ~lGi~ 215 (456)
+.|+.
T Consensus 100 ~~G~d 104 (122)
T cd02071 100 EMGVA 104 (122)
T ss_pred HCCCC
Confidence 88874
No 225
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=33.30 E-value=83 Score=24.31 Aligned_cols=47 Identities=15% Similarity=0.295 Sum_probs=35.7
Q ss_pred ecccCCCCCcchHHHHHHHHhCCCeEEE-EcCCcHHHHHHHHHHhCCC
Q 012767 169 LIPLFDPPIHDSAETIRRALSLGLGVKM-ITGDQLAIAKETGRRLGMG 215 (456)
Q Consensus 169 ~i~l~d~~r~~~~~~I~~l~~~Gi~v~m-iTGD~~~~a~~ia~~lGi~ 215 (456)
++++.+..++.+.+..+.|++.|+.|.+ ..+.....-..-|.+.|+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 3445566778888999999999999988 4666666666778888874
No 226
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=33.29 E-value=36 Score=32.15 Aligned_cols=35 Identities=23% Similarity=0.285 Sum_probs=30.3
Q ss_pred hHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 012767 180 SAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 215 (456)
Q Consensus 180 ~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~ 215 (456)
..++++ +++.|+.++++||.....+..+...+++.
T Consensus 20 ~~~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~ 54 (236)
T TIGR02471 20 FVELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLP 54 (236)
T ss_pred HHHHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCC
Confidence 335665 68899999999999999999999999885
No 227
>PLN02591 tryptophan synthase
Probab=33.29 E-value=2.2e+02 Score=27.60 Aligned_cols=28 Identities=11% Similarity=0.189 Sum_probs=19.7
Q ss_pred chhHHHHHHHHhhcCCEEEEecCCCCch
Q 012767 253 PEHKYEIVKHLQARNHICGMIGNGVNDA 280 (456)
Q Consensus 253 P~~K~~iV~~lq~~g~~v~~iGDG~ND~ 280 (456)
|.+-.+.++.+++....-+++|=|+++.
T Consensus 174 ~~~~~~~i~~vk~~~~~Pv~vGFGI~~~ 201 (250)
T PLN02591 174 SGRVESLLQELKEVTDKPVAVGFGISKP 201 (250)
T ss_pred chhHHHHHHHHHhcCCCceEEeCCCCCH
Confidence 4445567778877666677789998843
No 228
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=33.13 E-value=46 Score=29.00 Aligned_cols=81 Identities=12% Similarity=0.189 Sum_probs=54.1
Q ss_pred HHHHHccCeeeEEeeeecCCCCc-CCCCCCceEeEecccCCCCCcchHHHHHHHHhCCC-eE-EEEcCCc------HHHH
Q 012767 135 NKFAERGLRSLAVAYQEVPEGSK-ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GV-KMITGDQ------LAIA 205 (456)
Q Consensus 135 ~~~~~~Glr~l~vA~~~~~~~~~-~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi-~v-~miTGD~------~~~a 205 (456)
.-+...|++|+.+..+.-+++-. .-.+.+-.++|+-.+.-.-.+.+++.++.|++.|. .+ +++-|-- ....
T Consensus 25 ~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~~~~~~~~~ 104 (137)
T PRK02261 25 RALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGNLVVGKHDFEEV 104 (137)
T ss_pred HHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECCCCCCccChHHH
Confidence 35678999999988654221110 01134557899988888888999999999999966 34 4444432 3445
Q ss_pred HHHHHHhCCC
Q 012767 206 KETGRRLGMG 215 (456)
Q Consensus 206 ~~ia~~lGi~ 215 (456)
....+++|+.
T Consensus 105 ~~~l~~~G~~ 114 (137)
T PRK02261 105 EKKFKEMGFD 114 (137)
T ss_pred HHHHHHcCCC
Confidence 5677788863
No 229
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.76 E-value=1.1e+02 Score=30.34 Aligned_cols=63 Identities=14% Similarity=0.238 Sum_probs=38.7
Q ss_pred ccccCchhHHHHHHHHhh--cCCEEEEecCCCCc---h-hhhh------hcCeeEEecccc--HHHhhcccEEeeCC
Q 012767 248 FAGVFPEHKYEIVKHLQA--RNHICGMIGNGVND---A-PALK------KADIGIAVADAT--DAARSAADIVLTEP 310 (456)
Q Consensus 248 ~a~~~P~~K~~iV~~lq~--~g~~v~~iGDG~ND---~-~aLk------~AdvGIa~~~~~--~~a~~aaDivl~~~ 310 (456)
|.=|+|..=.++++...- .|..|+.+|-+..= . .||. .|.|-++..... ......||+++..-
T Consensus 138 ~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~ADIvI~Av 214 (295)
T PRK14174 138 FVSCTPYGILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQADILIAAI 214 (295)
T ss_pred cCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHhCCEEEEec
Confidence 455677666666665543 38999999998532 2 2443 356666655332 33457889998754
No 230
>PRK09529 bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta; Reviewed
Probab=32.67 E-value=2e+02 Score=31.84 Aligned_cols=140 Identities=22% Similarity=0.317 Sum_probs=83.3
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHH
Q 012767 178 HDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKY 257 (456)
Q Consensus 178 ~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~ 257 (456)
+++.+.++.+++.|+-|.+. |+-.+....-..+.|++...+|-. .+..... .-..-.++-+-+|+++.|-+..
T Consensus 149 e~a~~Ia~Elq~r~~lvfl~-G~l~EQl~e~gvk~G~~~~lvp~G----~~~ts~v--Ha~g~AiRaAliFGgv~pGd~~ 221 (711)
T PRK09529 149 EKAKKIIKELQKKNLLTFLC-GEVIEQLIEAGVKLGLDYRLVPLG----DDITSAI--HAANFAIRAALIFGGVEPGDYE 221 (711)
T ss_pred HHHHHHHHHHHHCCcEEEEc-CcHHHHhhhcccccccceeEEecC----CchhhHH--HHHHHHHHHHHHhcCCCCcCHH
Confidence 78888999999999987765 765555555555666543322211 0000000 0011223444589999999999
Q ss_pred HHHHHHhhc-CCEEEEecCCCCchhhhhhc---CeeEEec--cccHHHhhcccEEeeCCCchHHHHHHHHHHHH
Q 012767 258 EIVKHLQAR-NHICGMIGNGVNDAPALKKA---DIGIAVA--DATDAARSAADIVLTEPGLNVIITAVLISRAI 325 (456)
Q Consensus 258 ~iV~~lq~~-g~~v~~iGDG~ND~~aLk~A---dvGIa~~--~~~~~a~~aaDivl~~~~l~~i~~~i~~~R~i 325 (456)
++..+.+++ +..|.+.| ..+|..+-..| ..||=+- +.-......-+.++.+++.+.++.-=.+.|.+
T Consensus 222 ei~dY~~nRV~AfViA~G-~~s~~~~A~aaGai~~GfPVItd~~~pe~~~~~~~~~~~~~~d~iv~~~le~rgi 294 (711)
T PRK09529 222 ELLDYTKERVPAFVNALG-ELDDEWVAAAAGAINLGFPVITDQDVPEGICVPEWVLSEPDYDKIVQKALEVRGI 294 (711)
T ss_pred HHHHHHHhhccEEEEeec-ccCHHHHHHHhhHHhcCCcEeeCCCCccccccccccccCCCHHHHHHHHHHhcCc
Confidence 999999888 88899999 44554332222 2233221 22111123567788888888877666656553
No 231
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=32.48 E-value=98 Score=26.96 Aligned_cols=80 Identities=13% Similarity=0.144 Sum_probs=51.1
Q ss_pred HHHHccCeeeEEeeeecCCCCcC-CCCCCceEeEecccCCCCCcchHHHHHHHHhCCC--eEEEEcCCc------HHHHH
Q 012767 136 KFAERGLRSLAVAYQEVPEGSKE-SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL--GVKMITGDQ------LAIAK 206 (456)
Q Consensus 136 ~~~~~Glr~l~vA~~~~~~~~~~-~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi--~v~miTGD~------~~~a~ 206 (456)
-+...|+.|+.+..+.-+++--+ -.+.+-.++|+-++.-.--+..+++++.|++.|+ .++++-|-. .....
T Consensus 24 ~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~d~~~~~ 103 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQDFPDVE 103 (134)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcChhhhHHHH
Confidence 46778999988877653322111 1133557788887777777788999999999987 345555531 11123
Q ss_pred HHHHHhCCC
Q 012767 207 ETGRRLGMG 215 (456)
Q Consensus 207 ~ia~~lGi~ 215 (456)
.-.+++|+.
T Consensus 104 ~~l~~~Gv~ 112 (134)
T TIGR01501 104 KRFKEMGFD 112 (134)
T ss_pred HHHHHcCCC
Confidence 456888864
No 232
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.74 E-value=1.9e+02 Score=28.63 Aligned_cols=65 Identities=12% Similarity=0.177 Sum_probs=38.3
Q ss_pred cccccCchhHHHHHHHHhh--cCCEEEEecCCCCc----hhhhhhcCeeEEe--ccccH--HHhhcccEEeeCCC
Q 012767 247 GFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVND----APALKKADIGIAV--ADATD--AARSAADIVLTEPG 311 (456)
Q Consensus 247 v~a~~~P~~K~~iV~~lq~--~g~~v~~iGDG~ND----~~aLk~AdvGIa~--~~~~~--~a~~aaDivl~~~~ 311 (456)
.|.=|+|..=.++++.+.- .|..|+.+|-+..= +.+|...+.-+.+ ....+ .....|||++..-+
T Consensus 134 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~AvG 208 (282)
T PRK14169 134 TVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVAVG 208 (282)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEccC
Confidence 3555666666666666543 48899999987422 3455544444444 33322 23467899987544
No 233
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=30.95 E-value=87 Score=26.13 Aligned_cols=36 Identities=19% Similarity=0.255 Sum_probs=27.1
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCC
Q 012767 177 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGM 214 (456)
Q Consensus 177 r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi 214 (456)
-+++.++++.+++.|++++.+|++.. -...+.+.|.
T Consensus 56 t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 56 TEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 46888899999999999999998764 3334554443
No 234
>PLN02151 trehalose-phosphatase
Probab=30.35 E-value=1.1e+02 Score=31.27 Aligned_cols=60 Identities=10% Similarity=0.050 Sum_probs=40.8
Q ss_pred HHHHccCeeeEEeeeecCCCCcCCCCCCceEeEecccCCC--CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH
Q 012767 136 KFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDP--PIHDSAETIRRALSLGLGVKMITGDQLAIAKETG 209 (456)
Q Consensus 136 ~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~--~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia 209 (456)
.++....+.+++-|++ +++-+..--|. +-++++++|+.|. .+..|.++||........+.
T Consensus 92 ~~~~~~~~ll~lDyDG-------------TL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 153 (354)
T PLN02151 92 HKSEGKQIVMFLDYDG-------------TLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFV 153 (354)
T ss_pred HhhcCCceEEEEecCc-------------cCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHc
Confidence 4444455666666654 55544433333 5578899999998 45799999999998777654
No 235
>COG2832 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.82 E-value=72 Score=27.14 Aligned_cols=51 Identities=14% Similarity=0.145 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHhcccCccccchHHHHHHHHHhhh
Q 012767 333 MVRGIDGLSSTEFIQVLELNFLFTLDTVIAILQTAFTSKKDFGKEERELLWAHAQR 388 (456)
Q Consensus 333 ~~y~~~~~~~~i~l~~~~~~~~~pl~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (456)
.+|.+.|..+...+.++++.+.+|.++.-++....|..- +.|...|-..|+
T Consensus 4 ~i~i~iGfl~l~LGIiGifLPlLPTTPFlLLaa~cFaRs-----SpRf~~WLl~~~ 54 (119)
T COG2832 4 IIYIILGFLSLALGIIGIFLPLLPTTPFLLLAAACFARS-----SPRFHAWLLRHK 54 (119)
T ss_pred cHHHHHHHHHHHHHHHHhcCcccCCcHHHHHHHHHHHcC-----CcHHHHHHHcCc
Confidence 467777877777788888888999998888744444332 225555655443
No 236
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=29.62 E-value=1.5e+02 Score=29.95 Aligned_cols=51 Identities=20% Similarity=0.145 Sum_probs=45.1
Q ss_pred CCCceEeEecccCCCCCcchHHHHHHHHhC---CCeEEEEcCCcHHHHHHHHHH
Q 012767 161 GSPWQFIGLIPLFDPPIHDSAETIRRALSL---GLGVKMITGDQLAIAKETGRR 211 (456)
Q Consensus 161 e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~---Gi~v~miTGD~~~~a~~ia~~ 211 (456)
+.+|.-+=+++=..-+-||..++++.++.. |+.|...+-|++..|++++.-
T Consensus 164 ~~~~iKlEvi~e~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~~ 217 (326)
T PRK11840 164 GWDLVKLEVLGDAKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLEDA 217 (326)
T ss_pred CCCeEEEEEcCCCCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhc
Confidence 578888889988788889999999999999 999988888999999988764
No 237
>PLN02645 phosphoglycolate phosphatase
Probab=29.54 E-value=1.1e+02 Score=30.33 Aligned_cols=59 Identities=10% Similarity=0.107 Sum_probs=35.9
Q ss_pred HHHHHhhcCCEEEEecCCC-CchhhhhhcCeeEE-e--ccccH-HHh-----hcccEEeeCCCchHHHHHH
Q 012767 259 IVKHLQARNHICGMIGNGV-NDAPALKKADIGIA-V--ADATD-AAR-----SAADIVLTEPGLNVIITAV 319 (456)
Q Consensus 259 iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvGIa-~--~~~~~-~a~-----~aaDivl~~~~l~~i~~~i 319 (456)
+.+.+.-....++||||.. +|+.+-+.|++--. + |..+. ... ..+|+++ +++..+..++
T Consensus 239 a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~--~~~~~l~~~~ 307 (311)
T PLN02645 239 LANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYT--SKISDFLTLK 307 (311)
T ss_pred HHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEE--CCHHHHHHHh
Confidence 3344444456799999997 99999999985432 2 21221 111 2467777 4466655543
No 238
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=28.10 E-value=63 Score=27.93 Aligned_cols=80 Identities=15% Similarity=0.179 Sum_probs=53.8
Q ss_pred HHHHccCeeeEEeeeecCCCCc-CCCCCCceEeEecccCCCCCcchHHHHHHHHhCCC-eEEEEcCCcH-------HHHH
Q 012767 136 KFAERGLRSLAVAYQEVPEGSK-ESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL-GVKMITGDQL-------AIAK 206 (456)
Q Consensus 136 ~~~~~Glr~l~vA~~~~~~~~~-~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi-~v~miTGD~~-------~~a~ 206 (456)
-|...|+.|+-+..+.-+++-- .-.+.+-.++|+-++.-.--+..+++++.|+++|+ .+.++=|-.. +...
T Consensus 22 ~L~~~GfeVidLG~~v~~e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl~~v~vivGG~~~i~~~d~~~~~ 101 (128)
T cd02072 22 AFTEAGFNVVNLGVLSPQEEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGLKDILLYVGGNLVVGKQDFEDVE 101 (128)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCCCCCeEEEECCCCCChhhhHHHH
Confidence 4567899998887754322211 11234567889888888888899999999999998 6655555542 2233
Q ss_pred HHHHHhCCC
Q 012767 207 ETGRRLGMG 215 (456)
Q Consensus 207 ~ia~~lGi~ 215 (456)
...+++|+.
T Consensus 102 ~~L~~~Gv~ 110 (128)
T cd02072 102 KRFKEMGFD 110 (128)
T ss_pred HHHHHcCCC
Confidence 556777774
No 239
>PRK04017 hypothetical protein; Provisional
Probab=27.99 E-value=1.9e+02 Score=25.22 Aligned_cols=58 Identities=22% Similarity=0.297 Sum_probs=34.5
Q ss_pred HHHHHHHhhcCCE-EEEecCCCCchhhhhhcCee--------EEecccc-HHHhhccc-EEeeCCCchH
Q 012767 257 YEIVKHLQARNHI-CGMIGNGVNDAPALKKADIG--------IAVADAT-DAARSAAD-IVLTEPGLNV 314 (456)
Q Consensus 257 ~~iV~~lq~~g~~-v~~iGDG~ND~~aLk~AdvG--------Ia~~~~~-~~a~~aaD-ivl~~~~l~~ 314 (456)
.+++..|++.... +..+=.|-+|..+|+.+++. .++.+.. ..+....+ |++++++..+
T Consensus 10 ~e~i~~L~e~s~~g~vIVVEGk~D~~~L~~lGv~~~iI~t~g~~~~~~~e~ia~~~r~VIILTD~D~~G 78 (132)
T PRK04017 10 EEIIEELKEFSEAGAPIIVEGKRDVESLRKLGVEGEIIKVSRTPLAEIAELIASRGKEVIILTDFDRKG 78 (132)
T ss_pred HHHHHHHHHhcCCCCEEEEeCccHHHHHHHcCCCccEEEECCeecchHHHHHHhcCCeEEEEECCCcch
Confidence 4677777776433 44445789999999999772 2222222 11222233 5677888765
No 240
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=27.92 E-value=37 Score=30.50 Aligned_cols=26 Identities=35% Similarity=0.395 Sum_probs=23.3
Q ss_pred HHHhccccEEEcCcccccccCceEEE
Q 012767 4 IVDMAGMDVLCCDKTGTLTLNKLTVD 29 (456)
Q Consensus 4 iE~l~~i~~i~~DKTGTLT~~~~~v~ 29 (456)
.+.+.++.-+++|--||||-|++-+.
T Consensus 2 ~~ra~~IkLli~DVDGvLTDG~ly~~ 27 (170)
T COG1778 2 IARAKNIKLLILDVDGVLTDGKLYYD 27 (170)
T ss_pred hhhhhhceEEEEeccceeecCeEEEc
Confidence 57889999999999999999988764
No 241
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=27.82 E-value=97 Score=30.82 Aligned_cols=48 Identities=25% Similarity=0.377 Sum_probs=39.2
Q ss_pred EecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH---HhCCC
Q 012767 168 GLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETGR---RLGMG 215 (456)
Q Consensus 168 G~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~---~lGi~ 215 (456)
|++-..+.+=|++.++++.|+.+|-++.++|.....+-+...+ .+|+.
T Consensus 31 GVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 31 GVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred cceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 6666788889999999999999999999999888766666554 46664
No 242
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=27.78 E-value=37 Score=31.50 Aligned_cols=79 Identities=11% Similarity=0.175 Sum_probs=54.4
Q ss_pred HHHHHccCeeeEEeeeecCCCCc-C-CCCCCceEeEecccCCCCCcchHHHHHHHHhCCCe--EEEEcCCcHHHHHHHHH
Q 012767 135 NKFAERGLRSLAVAYQEVPEGSK-E-SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLG--VKMITGDQLAIAKETGR 210 (456)
Q Consensus 135 ~~~~~~Glr~l~vA~~~~~~~~~-~-~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~--v~miTGD~~~~a~~ia~ 210 (456)
.-|...|++|+.+..+- |.+.. + -.+.+..++|+-....+--+..++.|+.+++.|.+ +.++=|-..-+ ...++
T Consensus 106 ~~l~~~G~~vi~LG~~v-p~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG~~~~-~~~~~ 183 (197)
T TIGR02370 106 TMLRANGFDVIDLGRDV-PIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGGAPVT-QDWAD 183 (197)
T ss_pred HHHHhCCcEEEECCCCC-CHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEEChhcC-HHHHH
Confidence 35678899999887543 21110 0 11345578999998888899999999999999875 55444444433 46788
Q ss_pred HhCCC
Q 012767 211 RLGMG 215 (456)
Q Consensus 211 ~lGi~ 215 (456)
++|-+
T Consensus 184 ~~gad 188 (197)
T TIGR02370 184 KIGAD 188 (197)
T ss_pred HhCCc
Confidence 88764
No 243
>PLN02423 phosphomannomutase
Probab=27.76 E-value=90 Score=29.88 Aligned_cols=30 Identities=13% Similarity=0.230 Sum_probs=25.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcHHHH
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQLAIA 205 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a 205 (456)
++.+.+.++|++|++. ++++++||......
T Consensus 24 ~i~~~~~~ai~~l~~~-i~fviaTGR~~~~~ 53 (245)
T PLN02423 24 EATPEMLEFMKELRKV-VTVGVVGGSDLSKI 53 (245)
T ss_pred cCCHHHHHHHHHHHhC-CEEEEECCcCHHHH
Confidence 5778999999999976 99999999976544
No 244
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=27.42 E-value=92 Score=24.49 Aligned_cols=48 Identities=19% Similarity=0.250 Sum_probs=36.1
Q ss_pred EecccCC---CCCcchHHHHHHHHhCCCeEEEE-cCCcHHHHHHHHHHhCCC
Q 012767 168 GLIPLFD---PPIHDSAETIRRALSLGLGVKMI-TGDQLAIAKETGRRLGMG 215 (456)
Q Consensus 168 G~i~l~d---~~r~~~~~~I~~l~~~Gi~v~mi-TGD~~~~a~~ia~~lGi~ 215 (456)
.++++.+ ...+-+.+..+.|+++|+.+.+- ++++......-|...|++
T Consensus 3 ~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p 54 (94)
T PF03129_consen 3 VIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIP 54 (94)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTES
T ss_pred EEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCe
Confidence 4566666 56677788999999999998887 555556666777888874
No 245
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=26.98 E-value=55 Score=29.23 Aligned_cols=23 Identities=17% Similarity=0.264 Sum_probs=20.4
Q ss_pred CcchHHHHHHHHhCCCeEEEEcC
Q 012767 177 IHDSAETIRRALSLGLGVKMITG 199 (456)
Q Consensus 177 r~~~~~~I~~l~~~Gi~v~miTG 199 (456)
-+++.++|+.+.+.|+.++|+|-
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTN 53 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTN 53 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE
T ss_pred chhHHHHHHHHHhcCCeEEEEeC
Confidence 35799999999999999999995
No 246
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=26.98 E-value=43 Score=31.06 Aligned_cols=79 Identities=19% Similarity=0.283 Sum_probs=53.9
Q ss_pred HHHHHccCeeeEEeeeecCCCCcC--CCCCCceEeEecccCCCCCcchHHHHHHHHhCCC--eEEEEcCCcHHHHHHHHH
Q 012767 135 NKFAERGLRSLAVAYQEVPEGSKE--SSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGL--GVKMITGDQLAIAKETGR 210 (456)
Q Consensus 135 ~~~~~~Glr~l~vA~~~~~~~~~~--~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi--~v~miTGD~~~~a~~ia~ 210 (456)
.-|...|++|+.+..+ +|.+... -.+.+..++|+-.....--+..++.|+.+++.+. ++.++=|-..-+ ...++
T Consensus 104 ~~l~~~G~~vi~lG~~-~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~vGG~~~~-~~~~~ 181 (201)
T cd02070 104 TMLEANGFEVIDLGRD-VPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGLRDKVKVMVGGAPVN-QEFAD 181 (201)
T ss_pred HHHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCCCcCCeEEEECCcCC-HHHHH
Confidence 3567899999877633 2322110 1134567899998888888999999999999987 675555554433 35778
Q ss_pred HhCCC
Q 012767 211 RLGMG 215 (456)
Q Consensus 211 ~lGi~ 215 (456)
.+|-+
T Consensus 182 ~~GaD 186 (201)
T cd02070 182 EIGAD 186 (201)
T ss_pred HcCCc
Confidence 88764
No 247
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.56 E-value=2.9e+02 Score=27.25 Aligned_cols=65 Identities=18% Similarity=0.252 Sum_probs=39.6
Q ss_pred cccccCchhHHHHHHHHhh--cCCEEEEecCCCCc----hhhhhhcCeeEEec--cccHH--HhhcccEEeeCCC
Q 012767 247 GFAGVFPEHKYEIVKHLQA--RNHICGMIGNGVND----APALKKADIGIAVA--DATDA--ARSAADIVLTEPG 311 (456)
Q Consensus 247 v~a~~~P~~K~~iV~~lq~--~g~~v~~iGDG~ND----~~aLk~AdvGIa~~--~~~~~--a~~aaDivl~~~~ 311 (456)
.|.=|+|..=.++++.+.- .|..|+.+|-+..= +.+|...+.-+.+. ...+. ....|||++..-+
T Consensus 136 ~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsAvG 210 (278)
T PRK14172 136 CFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVAIG 210 (278)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEcCC
Confidence 3556677766677776653 48999999997532 34555555444443 33222 3467899987544
No 248
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=26.56 E-value=59 Score=29.67 Aligned_cols=28 Identities=25% Similarity=0.463 Sum_probs=22.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCcH
Q 012767 175 PPIHDSAETIRRALSLGLGVKMITGDQL 202 (456)
Q Consensus 175 ~~r~~~~~~I~~l~~~Gi~v~miTGD~~ 202 (456)
+|-||+.+++++|.+.|..++++|+...
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~ 100 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPP 100 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCc
Confidence 4668999999999999988888888754
No 249
>PRK13670 hypothetical protein; Provisional
Probab=26.37 E-value=1.9e+02 Score=29.93 Aligned_cols=97 Identities=14% Similarity=0.148 Sum_probs=64.0
Q ss_pred eEeEecccCCCCCcchHHHHHHHHh---CCCeEEEEcCCc----------HHHHHHHHHHhCCCCCCCCCccccCCchhh
Q 012767 165 QFIGLIPLFDPPIHDSAETIRRALS---LGLGVKMITGDQ----------LAIAKETGRRLGMGTNMYPSSALSGQDRDE 231 (456)
Q Consensus 165 ~~lG~i~l~d~~r~~~~~~I~~l~~---~Gi~v~miTGD~----------~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~ 231 (456)
..+|+|+=+||+-.|=...|+++++ .|..+++++|+- ...-..++..+|++-
T Consensus 2 k~~GIIaEfdg~H~GH~~~i~~a~~~a~~~~~~~Vmp~~f~qrg~p~i~~~~~R~~~a~~~GvD~--------------- 66 (388)
T PRK13670 2 KVTGIIVEYNPFHNGHLYHLNQAKKLTNADVTIAVMSGNFVQRGEPAIVDKWTRAKMALENGVDL--------------- 66 (388)
T ss_pred ceeEEEeeeCCcCHHHHHHHHHHHHHHhCCCcEEEecHHHhCCCCCCCCCHHHHHHHHHHcCCCE---------------
Confidence 5789999999999999998888874 477787777762 233345556666531
Q ss_pred hhhcCChHHHHhhcccccccCchhHHH-HHHHHhhcCCEEEEecCCCCchhhhhh
Q 012767 232 SIVALPVDELIEKADGFAGVFPEHKYE-IVKHLQARNHICGMIGNGVNDAPALKK 285 (456)
Q Consensus 232 ~~~~~~~~~~~~~~~v~a~~~P~~K~~-iV~~lq~~g~~v~~iGDG~ND~~aLk~ 285 (456)
+++.--.|+..+|++=.. .|+.|..-|-..+.+|....|...|+.
T Consensus 67 ---------vielpf~~a~~sae~F~~~aV~iL~~l~v~~lv~G~e~g~~~~L~~ 112 (388)
T PRK13670 67 ---------VVELPFLYSVQSADFFAEGAVSILDALGVDSLVFGSESGDIEDFQK 112 (388)
T ss_pred ---------EEEeCCchHhCCHHHHHHhHHHHHHHcCCCEEEEcCCCCCHHHHHH
Confidence 000001267777776553 455665557677889988778766654
No 250
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=26.15 E-value=3.9e+02 Score=25.81 Aligned_cols=39 Identities=15% Similarity=0.247 Sum_probs=24.9
Q ss_pred CCCCcchHHHHHHHHhCCCeE-EEEcCCcH-HHHHHHHHHh
Q 012767 174 DPPIHDSAETIRRALSLGLGV-KMITGDQL-AIAKETGRRL 212 (456)
Q Consensus 174 d~~r~~~~~~I~~l~~~Gi~v-~miTGD~~-~~a~~ia~~l 212 (456)
|.+-++..+.++.+++.|+.. .+++-... +....++...
T Consensus 123 Dlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~ 163 (256)
T TIGR00262 123 DLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKS 163 (256)
T ss_pred CCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhC
Confidence 444467788888888888874 46665553 3445555544
No 251
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=26.02 E-value=5.1e+02 Score=25.56 Aligned_cols=154 Identities=15% Similarity=0.182 Sum_probs=80.2
Q ss_pred cCcHHHHHhhccC-Cc-------hhhhHHHHHHHHHHHccCeeeEEeeeecCCCC----c--------------CCCCCC
Q 012767 110 KGSPEQILNLLHN-KS-------KIGRKVNAVINKFAERGLRSLAVAYQEVPEGS----K--------------ESSGSP 163 (456)
Q Consensus 110 KGa~e~Il~~~~~-~~-------~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~----~--------------~~~e~~ 163 (456)
-|.+..+.+.... +- ..-.+++..+.++.++|+.++.+..+.-|+-. + +.+. .
T Consensus 74 HGv~~~~~~~~~~~gl~viDaTCP~V~kv~~~v~~~~~~Gy~iiiiG~~~HpEv~gi~g~~~~~~~vv~~~~d~~~l~-~ 152 (280)
T TIGR00216 74 HGVPPEVREELEKKGLEVIDATCPLVTKVHNAVKKYAKEGYHVILIGKKNHPEVIGTRGYAPDKAIVVETLEDLENFK-V 152 (280)
T ss_pred CCCCHHHHHHHHHCCCeEEeCCCcccHHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEECCHHHHHhCC-C
Confidence 3666666554431 11 23357888999999999999999987655310 0 0000 0
Q ss_pred ceEeEecccCCCCCcchHHHHHHHHhCC----C----eEEEEcCCcHHHHHHHHHHhCCCCCCCCCccccCCchhhhhhc
Q 012767 164 WQFIGLIPLFDPPIHDSAETIRRALSLG----L----GVKMITGDQLAIAKETGRRLGMGTNMYPSSALSGQDRDESIVA 235 (456)
Q Consensus 164 ~~~lG~i~l~d~~r~~~~~~I~~l~~~G----i----~v~miTGD~~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~ 235 (456)
..-++++.=.-..+.+..+.++.|++.. + .++-.|-+.+..+..+|+++.+. +
T Consensus 153 ~~~v~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~nTIC~AT~~RQ~a~~~la~~vD~m-------i------------ 213 (280)
T TIGR00216 153 EDLLGVVSQTTLSQEDTKEIVAELKARVPQKEVPVFNTICYATQNRQDAVKELAPEVDLM-------I------------ 213 (280)
T ss_pred CCcEEEEEcCCCcHHHHHHHHHHHHHhCCCcCCCCCCCcccccHHHHHHHHHHHhhCCEE-------E------------
Confidence 1124444433334455555555555543 1 24455555566666666554321 1
Q ss_pred CChHHHHhhcccccccCchhHHHHHHHHhhcCCEEEEecCC-CCchhhhhhcC-eeEEecc
Q 012767 236 LPVDELIEKADGFAGVFPEHKYEIVKHLQARNHICGMIGNG-VNDAPALKKAD-IGIAVAD 294 (456)
Q Consensus 236 ~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG-~ND~~aLk~Ad-vGIa~~~ 294 (456)
+...-....=..+.+..++.|..+..|.+- --|...|+.++ |||.-|.
T Consensus 214 -----------VVGg~nSsNT~rL~ei~~~~~~~t~~Ie~~~el~~~~l~~~~~VGiTAGA 263 (280)
T TIGR00216 214 -----------VIGGKNSSNTTRLYEIAEEHGPPSYLIETAEELPEEWLKGVKVVGITAGA 263 (280)
T ss_pred -----------EECCCCCchHHHHHHHHHHhCCCEEEECChHHCCHHHhCCCCEEEEEecC
Confidence 122222222234455555556667777553 23456676554 5776653
No 252
>PF12017 Tnp_P_element: Transposase protein; InterPro: IPR021896 Protein in this family are transposases found in insects. This region is about 230 amino acids in length and is found associated with PF05485 from PFAM.
Probab=25.76 E-value=1.1e+02 Score=29.52 Aligned_cols=37 Identities=22% Similarity=0.234 Sum_probs=33.8
Q ss_pred hHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCCC
Q 012767 180 SAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMGT 216 (456)
Q Consensus 180 ~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~~ 216 (456)
..+.|..|.+.|+.|+=++-|...+=..+-++|||..
T Consensus 198 l~~iI~~l~~~g~~VvAivsD~g~~N~~~w~~Lgi~~ 234 (236)
T PF12017_consen 198 LKNIIEKLHEIGYNVVAIVSDMGSNNISLWRELGISE 234 (236)
T ss_pred HHHHHHHHHHCCCEEEEEECCCCcchHHHHHHcCCCC
Confidence 3788999999999999999999999999999999964
No 253
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=25.51 E-value=72 Score=26.65 Aligned_cols=27 Identities=15% Similarity=0.161 Sum_probs=23.5
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHH
Q 012767 177 IHDSAETIRRALSLGLGVKMITGDQLA 203 (456)
Q Consensus 177 r~~~~~~I~~l~~~Gi~v~miTGD~~~ 203 (456)
-+++.++++.+++.|++|+.+|+....
T Consensus 60 t~~~~~~~~~a~~~g~~vi~iT~~~~s 86 (128)
T cd05014 60 TDELLNLLPHLKRRGAPIIAITGNPNS 86 (128)
T ss_pred CHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 367889999999999999999997654
No 254
>COG0309 HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]
Probab=25.05 E-value=2.8e+02 Score=28.11 Aligned_cols=84 Identities=19% Similarity=0.289 Sum_probs=60.3
Q ss_pred ecccCCCCCcchHHHHHHHH-hCCCeEEEEcCCc--HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhc
Q 012767 169 LIPLFDPPIHDSAETIRRAL-SLGLGVKMITGDQ--LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA 245 (456)
Q Consensus 169 ~i~l~d~~r~~~~~~I~~l~-~~Gi~v~miTGD~--~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 245 (456)
+.++.|+-|-+...++.++. ..|+.+.+--..- .+.++.+++.+||++- .+...-
T Consensus 219 vtAMhDaTrGGla~aLnEmA~aSgvgi~I~ee~Ipv~~eVr~vce~lGiDPl----------------------~~anEG 276 (339)
T COG0309 219 VTAMHDATRGGLAGALNEMAEASGVGISIEEEKIPVREEVRGVCELLGLDPL----------------------ELANEG 276 (339)
T ss_pred hhhccCCchhHHHHHHHHHHHHcCCeEEEeeccccccHHHHHHHHHhCCCHH----------------------HhhcCc
Confidence 67799999999999988875 6777776654433 3788999999999641 111222
Q ss_pred ccccccCchhHHHHHHHHhhcC-CEEEEec
Q 012767 246 DGFAGVFPEHKYEIVKHLQARN-HICGMIG 274 (456)
Q Consensus 246 ~v~a~~~P~~K~~iV~~lq~~g-~~v~~iG 274 (456)
.+.+-+.|++-.+.++.|++.+ .....+|
T Consensus 277 ~lv~~V~~~~a~~~l~~L~~~~~~~A~iIG 306 (339)
T COG0309 277 KLVIAVPPEHAEEVLEALRSHGLKDAAIIG 306 (339)
T ss_pred eEEEEECHHHHHHHHHHHHhcCCccceeEE
Confidence 3567788888788899999887 4444444
No 255
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are both strongly stimulated by the formation of the complex. The alpha subunit catalyzes the cleavage of indole 3-glycerol phosphate (IGP) to indole and d-glyceraldehyde 3-phosphate (G3P). Indole is then channeled to the active site of the beta subunit, a PLP-dependent enzyme that catalyzes a replacement reaction to convert L-serine into L-tryptophan.
Probab=25.01 E-value=1.4e+02 Score=28.63 Aligned_cols=24 Identities=17% Similarity=0.365 Sum_probs=14.5
Q ss_pred HHHHHHHhhcCCEEEEecCCCCch
Q 012767 257 YEIVKHLQARNHICGMIGNGVNDA 280 (456)
Q Consensus 257 ~~iV~~lq~~g~~v~~iGDG~ND~ 280 (456)
.+.++.+++....-.++|=|+|+.
T Consensus 176 ~~~i~~lr~~~~~pI~vggGI~~~ 199 (242)
T cd04724 176 KELIKRIRKYTDLPIAVGFGISTP 199 (242)
T ss_pred HHHHHHHHhcCCCcEEEEccCCCH
Confidence 355566655545556677777744
No 256
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=24.01 E-value=1.3e+02 Score=22.73 Aligned_cols=47 Identities=17% Similarity=0.260 Sum_probs=34.0
Q ss_pred ecccCCCCCcchHHHHHHHHhCCCeEEEEc-CCcHHHHHHHHHHhCCC
Q 012767 169 LIPLFDPPIHDSAETIRRALSLGLGVKMIT-GDQLAIAKETGRRLGMG 215 (456)
Q Consensus 169 ~i~l~d~~r~~~~~~I~~l~~~Gi~v~miT-GD~~~~a~~ia~~lGi~ 215 (456)
++++.+..++.+.+..+.|++.|+.|.+.. +.+.......|...|+.
T Consensus 6 i~~~~~~~~~~a~~i~~~Lr~~g~~v~~~~~~~~~~~~~~~a~~~~~~ 53 (91)
T cd00859 6 VVPLGEGALSEALELAEQLRDAGIKAEIDYGGRKLKKQFKYADRSGAR 53 (91)
T ss_pred EEEcChHHHHHHHHHHHHHHHCCCEEEEecCCCCHHHHHHHHHHcCCC
Confidence 444556667788888999999999988744 34666666777777763
No 257
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=23.71 E-value=5.4e+02 Score=23.14 Aligned_cols=93 Identities=13% Similarity=0.201 Sum_probs=52.3
Q ss_pred HHHHHHHHHHccCeeeEEeeeecCCCCcCCCCCCceEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHH
Q 012767 130 VNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITGDQLAIAKETG 209 (456)
Q Consensus 130 ~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia 209 (456)
++...+.++..|--++.-+|.. + + . ....++.|+..|++++...|+ ...+..+-
T Consensus 43 ~~~i~~~ls~~G~i~~~R~Y~~------------a-~----a--------~~~l~~~l~~~Gf~pv~~kG~-~Dv~laID 96 (160)
T TIGR00288 43 LDEIREILSEYGDIKIGKVLLN------------Q-Y----A--------SDKLIEAVVNQGFEPIIVAGD-VDVRMAVE 96 (160)
T ss_pred HHHHHHHHHhcCCeEEEEEEec------------h-h----c--------cHHHHHHHHHCCceEEEecCc-ccHHHHHH
Confidence 4556677888887666655542 0 0 0 124577888999999888883 22222221
Q ss_pred HHhCCC-CCCCCCccccCCchhhhhhcCChHHHHhhcccccccCc-hhHHHHHHHHhhcCCEEEEecC
Q 012767 210 RRLGMG-TNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFP-EHKYEIVKHLQARNHICGMIGN 275 (456)
Q Consensus 210 ~~lGi~-~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P-~~K~~iV~~lq~~g~~v~~iGD 275 (456)
- +.+. . .+.+.|+=+|- .+=..+++.++++|..|..+|-
T Consensus 97 a-me~~~~--------------------------~~iD~~vLvSgD~DF~~Lv~~lre~G~~V~v~g~ 137 (160)
T TIGR00288 97 A-MELIYN--------------------------PNIDAVALVTRDADFLPVINKAKENGKETIVIGA 137 (160)
T ss_pred H-HHHhcc--------------------------CCCCEEEEEeccHhHHHHHHHHHHCCCEEEEEeC
Confidence 1 1010 0 11123444433 2334678888999988888774
No 258
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.65 E-value=2.2e+02 Score=28.16 Aligned_cols=65 Identities=23% Similarity=0.374 Sum_probs=39.5
Q ss_pred cccccCchhHHHHHHHHhh--cCCEEEEecCC-CCchh---hhhhcC--eeEEeccccH--HHhhcccEEeeCCC
Q 012767 247 GFAGVFPEHKYEIVKHLQA--RNHICGMIGNG-VNDAP---ALKKAD--IGIAVADATD--AARSAADIVLTEPG 311 (456)
Q Consensus 247 v~a~~~P~~K~~iV~~lq~--~g~~v~~iGDG-~ND~~---aLk~Ad--vGIa~~~~~~--~a~~aaDivl~~~~ 311 (456)
.|.-++|..=.++++...- .|..|..+|-+ .-=-| +|...+ |-++.....+ .....||+++..-+
T Consensus 130 ~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~ADIvI~Avg 204 (279)
T PRK14178 130 GFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQADILVSAAG 204 (279)
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCCEEEECCC
Confidence 4556677666666666543 38899999998 44445 665444 4444443222 23467899887543
No 259
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=23.22 E-value=2.2e+02 Score=33.07 Aligned_cols=39 Identities=15% Similarity=0.175 Sum_probs=29.7
Q ss_pred CCcchHHHHHHHHh-CCCeEEEEcCCcHHHHHHHHHHhCC
Q 012767 176 PIHDSAETIRRALS-LGLGVKMITGDQLAIAKETGRRLGM 214 (456)
Q Consensus 176 ~r~~~~~~I~~l~~-~Gi~v~miTGD~~~~a~~ia~~lGi 214 (456)
|-+++.++++.|.+ -+-.|+|+||...+.....-..+++
T Consensus 623 p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~L 662 (934)
T PLN03064 623 LHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFDM 662 (934)
T ss_pred CCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCCc
Confidence 34677888888865 4678999999999888776655443
No 260
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=23.07 E-value=5.7e+02 Score=25.50 Aligned_cols=44 Identities=11% Similarity=0.227 Sum_probs=30.4
Q ss_pred cCcHHHHHhhccC-Cc-------hhhhHHHHHHHHHHHccCeeeEEeeeecC
Q 012767 110 KGSPEQILNLLHN-KS-------KIGRKVNAVINKFAERGLRSLAVAYQEVP 153 (456)
Q Consensus 110 KGa~e~Il~~~~~-~~-------~~~~~~~~~i~~~~~~Glr~l~vA~~~~~ 153 (456)
-|.+..+.+.... +- ..-.+++..+.++.++|+.++.+..+.-|
T Consensus 74 HGv~~~~~~~~~~~g~~viDaTCP~V~k~~~~v~~~~~~Gy~vvi~G~~~Hp 125 (298)
T PRK01045 74 HGVSPAVREEAKERGLTVIDATCPLVTKVHKEVARMSREGYEIILIGHKGHP 125 (298)
T ss_pred CCCCHHHHHHHHHCCCeEEeCCCccchHHHHHHHHHHhCCCEEEEEeCCCCC
Confidence 3666666554431 11 13357888999999999999999977654
No 261
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=23.05 E-value=82 Score=26.18 Aligned_cols=27 Identities=22% Similarity=0.113 Sum_probs=23.2
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHH
Q 012767 177 IHDSAETIRRALSLGLGVKMITGDQLA 203 (456)
Q Consensus 177 r~~~~~~I~~l~~~Gi~v~miTGD~~~ 203 (456)
-+++.++++.+++.|.+++.+|+....
T Consensus 59 t~e~~~~~~~a~~~g~~vi~iT~~~~s 85 (126)
T cd05008 59 TADTLAALRLAKEKGAKTVAITNVVGS 85 (126)
T ss_pred CHHHHHHHHHHHHcCCeEEEEECCCCC
Confidence 357889999999999999999997553
No 262
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=23.01 E-value=2.2e+02 Score=26.44 Aligned_cols=32 Identities=22% Similarity=0.307 Sum_probs=27.4
Q ss_pred cCCCCCcchHHHHHHHHhCCCeEEEEcCCcHH
Q 012767 172 LFDPPIHDSAETIRRALSLGLGVKMITGDQLA 203 (456)
Q Consensus 172 l~d~~r~~~~~~I~~l~~~Gi~v~miTGD~~~ 203 (456)
+.-++-||+.+.|++.+..|++|.+-|.....
T Consensus 100 lkahlypDav~~ik~wk~~g~~vyiYSSGSV~ 131 (229)
T COG4229 100 LKAHLYPDAVQAIKRWKALGMRVYIYSSGSVK 131 (229)
T ss_pred cccccCHhHHHHHHHHHHcCCcEEEEcCCCch
Confidence 46678899999999999999999998876553
No 263
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=22.76 E-value=3.2e+02 Score=25.29 Aligned_cols=27 Identities=15% Similarity=0.231 Sum_probs=23.5
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHH
Q 012767 177 IHDSAETIRRALSLGLGVKMITGDQLA 203 (456)
Q Consensus 177 r~~~~~~I~~l~~~Gi~v~miTGD~~~ 203 (456)
-+++.++++.+|+.|.+++.+||....
T Consensus 122 s~~v~~a~~~Ak~~G~~vI~IT~~~~s 148 (196)
T PRK10886 122 SRDIVKAVEAAVTRDMTIVALTGYDGG 148 (196)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 467889999999999999999997654
No 264
>PF02219 MTHFR: Methylenetetrahydrofolate reductase; InterPro: IPR003171 This family includes the 5,10-methylenetetrahydrofolate reductase 1.7.99.5 from EC from bacteria and methylenetetrahydrofolate reductase 1.5.1.20 from EC from eukaryotes. The structure for this domain is known [] to be a TIM barrel.; GO: 0004489 methylenetetrahydrofolate reductase (NADPH) activity, 0006555 methionine metabolic process, 0055114 oxidation-reduction process; PDB: 3IJD_B 1B5T_B 3FSU_C 1ZPT_C 2FMO_B 3FST_C 2FMN_C 1ZP3_A 1ZP4_B 1ZRQ_B ....
Probab=22.65 E-value=83 Score=30.93 Aligned_cols=39 Identities=21% Similarity=0.208 Sum_probs=29.4
Q ss_pred eEeEecccCCCCCcchHHHHHHHHhCCC-eEEEEcCCcHH
Q 012767 165 QFIGLIPLFDPPIHDSAETIRRALSLGL-GVKMITGDQLA 203 (456)
Q Consensus 165 ~~lG~i~l~d~~r~~~~~~I~~l~~~Gi-~v~miTGD~~~ 203 (456)
..+--+...|.-|......+..++.+|| .|..+|||.+.
T Consensus 72 ~~i~Hlt~rd~n~~~l~~~L~~~~~~Gi~niL~l~GD~~~ 111 (287)
T PF02219_consen 72 EPIPHLTCRDRNREALQSDLLGAHALGIRNILALTGDPPK 111 (287)
T ss_dssp -EEEEEESTTSBHHHHHHHHHHHHHTT--EEEEESS-TST
T ss_pred ceEEeecccCCCHHHHHHHHHHHHHcCCCeEEEecCCCCC
Confidence 4455566778778888899999999999 59999999874
No 265
>PRK13938 phosphoheptose isomerase; Provisional
Probab=22.51 E-value=1.6e+02 Score=27.37 Aligned_cols=27 Identities=22% Similarity=0.263 Sum_probs=23.5
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHH
Q 012767 177 IHDSAETIRRALSLGLGVKMITGDQLA 203 (456)
Q Consensus 177 r~~~~~~I~~l~~~Gi~v~miTGD~~~ 203 (456)
-+++.++++.+++.|++++.+||....
T Consensus 126 t~~vi~a~~~Ak~~G~~vI~iT~~~~s 152 (196)
T PRK13938 126 SMSVLRAAKTARELGVTVVAMTGESGG 152 (196)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 468889999999999999999997653
No 266
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=22.46 E-value=1.4e+02 Score=26.18 Aligned_cols=35 Identities=17% Similarity=0.128 Sum_probs=32.0
Q ss_pred eEeEecccCCCCCcchHHHHHHHHhCCCeEEEEcC
Q 012767 165 QFIGLIPLFDPPIHDSAETIRRALSLGLGVKMITG 199 (456)
Q Consensus 165 ~~lG~i~l~d~~r~~~~~~I~~l~~~Gi~v~miTG 199 (456)
.-++++++.+.|...+-.+-+.|+++|++|+-+--
T Consensus 17 K~IAvVG~S~~P~r~sy~V~kyL~~~GY~ViPVNP 51 (140)
T COG1832 17 KTIAVVGASDKPDRPSYRVAKYLQQKGYRVIPVNP 51 (140)
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHCCCEEEeeCc
Confidence 56899999999999999999999999999998865
No 267
>cd06167 LabA_like LabA_like proteins. A well conserved group of bacterial proteins with no defined function. LabA, a member from Synechococcus elongatus PCC 7942, has been shown to play a role in cyanobacterial circadian timing. It is required for negative feedback regulation of the autokinase/autophosphatase KaiC, a central component of the circadian clock system. In particular, LabA seems necessary for KaiC-dependent repression of gene expression.
Probab=22.11 E-value=3.1e+02 Score=23.40 Aligned_cols=27 Identities=15% Similarity=0.203 Sum_probs=15.9
Q ss_pred HHHHHHHhhcCCEEEEecCCCCchhhh
Q 012767 257 YEIVKHLQARNHICGMIGNGVNDAPAL 283 (456)
Q Consensus 257 ~~iV~~lq~~g~~v~~iGDG~ND~~aL 283 (456)
...++.++++|..|..+|-...-.+.|
T Consensus 113 ~~~i~~lr~~G~~V~v~~~~~~~s~~L 139 (149)
T cd06167 113 VPLVERLRELGKRVIVVGFEAKTSREL 139 (149)
T ss_pred HHHHHHHHHcCCEEEEEccCccChHHH
Confidence 345666777777777777653333333
No 268
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=22.09 E-value=3.7e+02 Score=24.76 Aligned_cols=37 Identities=22% Similarity=0.285 Sum_probs=24.2
Q ss_pred chHHHHHHHHhCCCeEEEEcC------C-------cHHHHHHHHHHhCCC
Q 012767 179 DSAETIRRALSLGLGVKMITG------D-------QLAIAKETGRRLGMG 215 (456)
Q Consensus 179 ~~~~~I~~l~~~Gi~v~miTG------D-------~~~~a~~ia~~lGi~ 215 (456)
|+.-++..+++.|.+|.-++- + +.+.+..+|+.+|++
T Consensus 11 DS~~al~~a~~~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgip 60 (194)
T cd01994 11 DSCYALYRALEEGHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIP 60 (194)
T ss_pred HHHHHHHHHHHcCCEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCc
Confidence 444556666777777554441 1 456778888888885
No 269
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=21.84 E-value=5.1e+02 Score=29.92 Aligned_cols=81 Identities=16% Similarity=0.236 Sum_probs=48.1
Q ss_pred CchhhhHHHHHHHHHHHccCeeeEEeeeecCCCCcCCCCCCceEeEecccCCCCCc-chHHHHHHHHhCCCeEEEEcCCc
Q 012767 123 KSKIGRKVNAVINKFAERGLRSLAVAYQEVPEGSKESSGSPWQFIGLIPLFDPPIH-DSAETIRRALSLGLGVKMITGDQ 201 (456)
Q Consensus 123 ~~~~~~~~~~~i~~~~~~Glr~l~vA~~~~~~~~~~~~e~~~~~lG~i~l~d~~r~-~~~~~I~~l~~~Gi~v~miTGD~ 201 (456)
.+..+......+..+.+.|.++..+.=+.-. .-... -+=+|+--+.-.+.| +=.+-|+++++.|..|.| -||.
T Consensus 721 ~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~--aA~sv---A~~VGi~~V~aev~P~~K~~~Ik~lq~~~~~VaM-VGDG 794 (951)
T KOG0207|consen 721 EDQVRPDAALAVAELKSMGIKVVMLTGDNDA--AARSV---AQQVGIDNVYAEVLPEQKAEKIKEIQKNGGPVAM-VGDG 794 (951)
T ss_pred ccccchhHHHHHHHHHhcCceEEEEcCCCHH--HHHHH---HHhhCcceEEeccCchhhHHHHHHHHhcCCcEEE-EeCC
Confidence 3456677788899999999999887532100 00000 012443333333444 335789999999966666 5786
Q ss_pred HHHHHHHH
Q 012767 202 LAIAKETG 209 (456)
Q Consensus 202 ~~~a~~ia 209 (456)
..-|-++|
T Consensus 795 INDaPALA 802 (951)
T KOG0207|consen 795 INDAPALA 802 (951)
T ss_pred CCccHHHH
Confidence 66555554
No 270
>PF02679 ComA: (2R)-phospho-3-sulfolactate synthase (ComA); InterPro: IPR003830 Methanogenic archaea produce methane via the anaerobic reduction of acetate or single carbon compounds []. Coenzyme M (CoM; 2-mercaptoethanesulphonic acid) serves as the terminal methyl carrier for this process. Previously thought to be unique to methanogenic archaea, CoM has also been found in methylotrophic bacteria. Biosynthesis of CoM begins with the Michael addition of sulphite to phosphoenolpyruvate, forming 2-phospho-3-sulpholactate (PSL). This reaction is catalyzed by members of this family, PSL synthase (ComA) []. Subsequently, PSL is dephosphorylated by phosphosulpholactate phosphatase (ComB) to form 3-sulpholactate [], which is then converted to 3-sulphopyruvate by L-sulpholactate dehydrogenase (ComC; 1.1.1.272 from EC) []. Sulphopyruvate decarboxylase (ComDE; 4.1.1.79 from EC) converts 3-sulphopyruvate to sulphoacetaldehyde []. Reductive thiolation of sulphoacetaldehyde is the final step.; GO: 0019295 coenzyme M biosynthetic process; PDB: 1U83_A 1QWG_A.
Probab=21.61 E-value=1.3e+02 Score=29.02 Aligned_cols=107 Identities=23% Similarity=0.236 Sum_probs=57.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHH----------HHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhc
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLA----------IAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKA 245 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~----------~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 245 (456)
+++-.++-|+.++++||.|. +|.... .-...++++|+.. ++-.
T Consensus 52 ~~~~l~eki~l~~~~gV~v~--~GGtl~E~a~~q~~~~~yl~~~k~lGf~~-------------------------IEiS 104 (244)
T PF02679_consen 52 PEEILKEKIDLAHSHGVYVY--PGGTLFEVAYQQGKFDEYLEECKELGFDA-------------------------IEIS 104 (244)
T ss_dssp TCHHHHHHHHHHHCTT-EEE--E-HHHHHHHHHTT-HHHHHHHHHHCT-SE-------------------------EEE-
T ss_pred CHHHHHHHHHHHHHcCCeEe--CCcHHHHHHHhcChHHHHHHHHHHcCCCE-------------------------EEec
Confidence 45558899999999998754 776542 3334455666531 1111
Q ss_pred ccccccCchhHHHHHHHHhhcCCEEEE-ecCCCCchhhhhhcCeeEEeccccHHHhhcccEEeeCCC
Q 012767 246 DGFAGVFPEHKYEIVKHLQARNHICGM-IGNGVNDAPALKKADIGIAVADATDAARSAADIVLTEPG 311 (456)
Q Consensus 246 ~v~a~~~P~~K~~iV~~lq~~g~~v~~-iGDG~ND~~aLk~AdvGIa~~~~~~~a~~aaDivl~~~~ 311 (456)
+.+-.+++++|.++|+..++.|-.|.. +| .-|...-..-++.--+..+......-||.|+.+..
T Consensus 105 dGti~l~~~~r~~~I~~~~~~Gf~v~~EvG--~K~~~~~~~~~~~~~i~~~~~dLeAGA~~ViiEar 169 (244)
T PF02679_consen 105 DGTIDLPEEERLRLIRKAKEEGFKVLSEVG--KKDPESDFSLDPEELIEQAKRDLEAGADKVIIEAR 169 (244)
T ss_dssp -SSS---HHHHHHHHHHHCCTTSEEEEEES---SSHHHHTT--CCHHHHHHHHHHHHTECEEEE--T
T ss_pred CCceeCCHHHHHHHHHHHHHCCCEEeeccc--CCCchhcccCCHHHHHHHHHHHHHCCCCEEEEeee
Confidence 345678899999999999999877664 67 33333222222222222333444456788887655
No 271
>PF12218 End_N_terminal: N terminal extension of bacteriophage endosialidase; InterPro: IPR024429 This entry represents the N-terminal extension domain of endosialidases which is approximately 70 amino acids in length. The two N-terminal domains (this domain and the beta propeller) assemble in the compact 'cap' whereas the C-terminal domain forms an extended tail-like structure. The very N-terminal part of the 'cap' region (residues 246 to 312) holds the only alpha-helix of the protein and is presumably the residual part of the deleted N-terminal head-binding domain [].; PDB: 3JU4_A 3GVL_A 3GVK_B 3GVJ_A 1V0E_B 1V0F_E.
Probab=21.51 E-value=37 Score=25.37 Aligned_cols=21 Identities=29% Similarity=0.612 Sum_probs=8.9
Q ss_pred EecCCCCc-hhhh----hhcCeeEEe
Q 012767 272 MIGNGVND-APAL----KKADIGIAV 292 (456)
Q Consensus 272 ~iGDG~ND-~~aL----k~AdvGIa~ 292 (456)
++|||++| ..|+ ..+.+|--+
T Consensus 1 A~GDGvtdDt~A~~a~l~a~~~g~~I 26 (67)
T PF12218_consen 1 AKGDGVTDDTAAITAALEASPVGRKI 26 (67)
T ss_dssp ---CCCCE-HHHHHHHHHHS-TTS-E
T ss_pred CCCccccCcHHHHHHHHhccCCCeEE
Confidence 57999855 4444 445555433
No 272
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=21.42 E-value=1.1e+02 Score=26.84 Aligned_cols=38 Identities=13% Similarity=-0.061 Sum_probs=31.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCC
Q 012767 176 PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGM 214 (456)
Q Consensus 176 ~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi 214 (456)
+||++.+.++.|.+ .++++|.|......|..+.+.+.-
T Consensus 37 ~RP~l~~FL~~l~~-~~ev~i~T~~~~~ya~~v~~~ldp 74 (159)
T PF03031_consen 37 LRPGLDEFLEELSK-HYEVVIWTSASEEYAEPVLDALDP 74 (159)
T ss_dssp E-TTHHHHHHHHHH-HCEEEEE-SS-HHHHHHHHHHHTT
T ss_pred eCchHHHHHHHHHH-hceEEEEEeehhhhhhHHHHhhhh
Confidence 49999999999954 499999999999999999998874
No 273
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=21.39 E-value=7.5e+02 Score=23.94 Aligned_cols=27 Identities=22% Similarity=0.356 Sum_probs=16.5
Q ss_pred hhHHHHHHHHhhcCCEEEEecCCCCch
Q 012767 254 EHKYEIVKHLQARNHICGMIGNGVNDA 280 (456)
Q Consensus 254 ~~K~~iV~~lq~~g~~v~~iGDG~ND~ 280 (456)
..-.+.++.+++....-+++|=|+++.
T Consensus 186 ~~~~~~i~~vk~~~~~pv~vGfGI~~~ 212 (258)
T PRK13111 186 ADLAELVARLKAHTDLPVAVGFGISTP 212 (258)
T ss_pred ccHHHHHHHHHhcCCCcEEEEcccCCH
Confidence 334456777776545556678888554
No 274
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=21.02 E-value=3.8e+02 Score=26.70 Aligned_cols=39 Identities=21% Similarity=0.150 Sum_probs=32.8
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 012767 177 IHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 215 (456)
Q Consensus 177 r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~ 215 (456)
.+..+++++-+-..|..++++=......+..+++...++
T Consensus 87 gEs~~Dta~vls~y~~D~iv~R~~~~~~~~~~a~~~~vP 125 (305)
T PRK00856 87 GETLADTIRTLSAMGADAIVIRHPQSGAARLLAESSDVP 125 (305)
T ss_pred CcCHHHHHHHHHhcCCCEEEEeCCChHHHHHHHHHCCCC
Confidence 467788888888888999999888888999999887664
No 275
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=20.88 E-value=2.2e+02 Score=28.68 Aligned_cols=57 Identities=32% Similarity=0.466 Sum_probs=37.2
Q ss_pred HHHHHHhhcCCEEEEecCCC--------------------Cchhhhhhc--CeeEEecc----ccHHHhh--cccEEeeC
Q 012767 258 EIVKHLQARNHICGMIGNGV--------------------NDAPALKKA--DIGIAVAD----ATDAARS--AADIVLTE 309 (456)
Q Consensus 258 ~iV~~lq~~g~~v~~iGDG~--------------------ND~~aLk~A--dvGIa~~~----~~~~a~~--aaDivl~~ 309 (456)
.+++.|+++|..++.+.=|. .|-|+|-+- ++.+.++. +...+.+ .+|++++|
T Consensus 70 ~L~~~l~~~g~~~~ilsRGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~~~~V~V~~dR~~~~~~~~~~~~~dviilD 149 (325)
T PRK00652 70 ALAEQLQARGLKPGVVSRGYGGKLEKGPLLVDPDHTAAEVGDEPLLIARRTGAPVAVSPDRVAAARALLAAHGADIIILD 149 (325)
T ss_pred HHHHHHHHCCCeEEEECCCCCCCcCCCCEEeCCCCChhhhCcHHHHhccCCCceEEEcCcHHHHHHHHHhcCCCCEEEEc
Confidence 45677888888888874332 366655433 77888872 3333332 58999999
Q ss_pred CCchH
Q 012767 310 PGLNV 314 (456)
Q Consensus 310 ~~l~~ 314 (456)
++|..
T Consensus 150 DGfQh 154 (325)
T PRK00652 150 DGLQH 154 (325)
T ss_pred CCccC
Confidence 98754
No 276
>PRK06846 putative deaminase; Validated
Probab=20.75 E-value=8.9e+02 Score=24.83 Aligned_cols=158 Identities=15% Similarity=0.119 Sum_probs=81.9
Q ss_pred HHHHHHHHccCeeeEEeeeecCCCC----------cCCCCCCceEeEecccCCCC--CcchHHHHHHHHhCCCeEE-EEc
Q 012767 132 AVINKFAERGLRSLAVAYQEVPEGS----------KESSGSPWQFIGLIPLFDPP--IHDSAETIRRALSLGLGVK-MIT 198 (456)
Q Consensus 132 ~~i~~~~~~Glr~l~vA~~~~~~~~----------~~~~e~~~~~lG~i~l~d~~--r~~~~~~I~~l~~~Gi~v~-miT 198 (456)
..++.+...|-+.+.--....+... .+.+ ..+...+++.+...- +....+.++++.+.|..++ .+.
T Consensus 118 ~~l~~~~~~Gtt~~r~~v~~~~~~~~~~~~a~~e~l~e~-~~~v~~~~~a~~~~g~~~~~~~~lL~~al~~Ga~~i~gl~ 196 (410)
T PRK06846 118 KLIELLQSKGATHIRSHCNIDPVIGLKNLENLQAALERY-KDGFTYEIVAFPQHGLLRSNSEPLMREAMKMGAHLVGGVD 196 (410)
T ss_pred HHHHHHHhCCccEEEEEEeeCcccccchHHHHHHHHHHh-hCcceEEEEeccCcccCCccHHHHHHHHHHcCCCEEeCCC
Confidence 4566667778777533332222110 1111 133445666554432 4566788999988886633 222
Q ss_pred CCc--------HHHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcc-----c--cc----ccCchhHHHH
Q 012767 199 GDQ--------LAIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKAD-----G--FA----GVFPEHKYEI 259 (456)
Q Consensus 199 GD~--------~~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-----v--~a----~~~P~~K~~i 259 (456)
... .....++|++.|++-..- +..............-+...... . ++ ..+.++-.++
T Consensus 197 p~~~~~~~~~~l~~~~~lA~~~g~~v~~H----v~e~~~~~~~~~~~~~~~~~~~gl~~~v~~~H~~~l~~~~~~e~~~l 272 (410)
T PRK06846 197 PASVDGAIEKSLDTMFQIAVDFNKGVDIH----LHDTGPLGVATIKYLVETTEEAQWKGKVTISHAFALGDLNEEEVEEL 272 (410)
T ss_pred CccCCcCHHHHHHHHHHHHHHhCCCcEEE----ECCCCChhHHHHHHHHHHHHHhCCCCCEEEEecchhhcCCHHHHHHH
Confidence 222 566778888988763211 11100000000000111111111 1 11 1233344456
Q ss_pred HHHHhhcCCEEEE---ecCCCCchhhhhhcCeeEEecc
Q 012767 260 VKHLQARNHICGM---IGNGVNDAPALKKADIGIAVAD 294 (456)
Q Consensus 260 V~~lq~~g~~v~~---iGDG~ND~~aLk~AdvGIa~~~ 294 (456)
++.+++.|-.|.. .|.|......|..++|-+++|.
T Consensus 273 i~~la~~g~~v~~~~~~~~g~~p~~~l~~~Gv~v~lGt 310 (410)
T PRK06846 273 AERLAAQGISITSTVPIGRLHMPIPLLHDKGVKVSLGT 310 (410)
T ss_pred HHHHHHcCCeEEEeCCCCCCCCCHHHHHhCCCeEEEec
Confidence 7889988865543 4889999999999999999863
No 277
>COG4996 Predicted phosphatase [General function prediction only]
Probab=20.65 E-value=2.3e+02 Score=24.78 Aligned_cols=54 Identities=19% Similarity=0.147 Sum_probs=43.4
Q ss_pred CCceEeEecccCCC------CCcchHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHhCCC
Q 012767 162 SPWQFIGLIPLFDP------PIHDSAETIRRALSLGLGVKMITGDQLAIAKETGRRLGMG 215 (456)
Q Consensus 162 ~~~~~lG~i~l~d~------~r~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~lGi~ 215 (456)
.+++.+.--.++|. ++++++++++.+++.|.-+-..|=.....|...-+.+++.
T Consensus 22 pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~ 81 (164)
T COG4996 22 PPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLL 81 (164)
T ss_pred CcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchh
Confidence 34444444445553 7899999999999999999999999999999888888875
No 278
>COG2022 ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
Probab=20.49 E-value=7.7e+02 Score=23.82 Aligned_cols=49 Identities=24% Similarity=0.304 Sum_probs=43.0
Q ss_pred CCCCceEeEecccCCCCCcchHHHHHHH---HhCCCeEEEEcCCcHHHHHHH
Q 012767 160 SGSPWQFIGLIPLFDPPIHDSAETIRRA---LSLGLGVKMITGDQLAIAKET 208 (456)
Q Consensus 160 ~e~~~~~lG~i~l~d~~r~~~~~~I~~l---~~~Gi~v~miTGD~~~~a~~i 208 (456)
.+.||.-+=+++=.+.+.||.-++++.+ -+.|+.|.--|.|++..|+.+
T Consensus 96 ~~t~wiKlEVi~d~~tLlPD~~etl~Aae~Lv~eGF~VlPY~~dD~v~arrL 147 (262)
T COG2022 96 LGTNWIKLEVIGDEKTLLPDPIETLKAAEQLVKEGFVVLPYTTDDPVLARRL 147 (262)
T ss_pred ccCCeEEEEEecCCcccCCChHHHHHHHHHHHhCCCEEeeccCCCHHHHHHH
Confidence 4689999999999999999998888765 478999999999999888776
No 279
>PRK00414 gmhA phosphoheptose isomerase; Reviewed
Probab=20.30 E-value=2.3e+02 Score=26.05 Aligned_cols=27 Identities=22% Similarity=0.244 Sum_probs=23.5
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCcHH
Q 012767 177 IHDSAETIRRALSLGLGVKMITGDQLA 203 (456)
Q Consensus 177 r~~~~~~I~~l~~~Gi~v~miTGD~~~ 203 (456)
-+++.++++.+++.|++++.+||....
T Consensus 124 t~~~i~~~~~ak~~g~~iI~iT~~~~s 150 (192)
T PRK00414 124 SGNIIKAIEAARAKGMKVITLTGKDGG 150 (192)
T ss_pred CHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 468889999999999999999997653
No 280
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=20.01 E-value=9.4e+02 Score=26.09 Aligned_cols=70 Identities=16% Similarity=0.193 Sum_probs=49.9
Q ss_pred chHHHHHHHHhCCCeEEEEcCCcH-HHHHHHHHHhCCCCCCCCCccccCCchhhhhhcCChHHHHhhcccccccCchhHH
Q 012767 179 DSAETIRRALSLGLGVKMITGDQL-AIAKETGRRLGMGTNMYPSSALSGQDRDESIVALPVDELIEKADGFAGVFPEHKY 257 (456)
Q Consensus 179 ~~~~~I~~l~~~Gi~v~miTGD~~-~~a~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~ 257 (456)
|+-.++..+++.+-++.+++=.+. ..+..++.-+++.- ..+.-.++++=.
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~i-----------------------------~~~~~~~~~e~~ 145 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLRI-----------------------------EQRSYVTEEDAR 145 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCce-----------------------------EEEEecCHHHHH
Confidence 577778888877778887776664 45566777777642 245666777888
Q ss_pred HHHHHHhhcCCEEEEecCCCC
Q 012767 258 EIVKHLQARNHICGMIGNGVN 278 (456)
Q Consensus 258 ~iV~~lq~~g~~v~~iGDG~N 278 (456)
..|+.+++.|.. +.+||+.-
T Consensus 146 ~~v~~lk~~G~~-~vvG~~~~ 165 (538)
T PRK15424 146 GQINELKANGIE-AVVGAGLI 165 (538)
T ss_pred HHHHHHHHCCCC-EEEcCchH
Confidence 889999998854 45688753
Done!