Query 012768
Match_columns 456
No_of_seqs 260 out of 1817
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 15:51:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012768.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012768hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1tt5_A APPBP1, amyloid protein 100.0 3E-90 1E-94 725.6 40.6 451 2-454 15-507 (531)
2 3cmm_A Ubiquitin-activating en 100.0 8.3E-58 2.8E-62 507.7 9.4 353 2-454 10-370 (1015)
3 1y8q_A Ubiquitin-like 1 activa 100.0 3.2E-54 1.1E-58 431.7 22.5 300 2-454 19-319 (346)
4 1tt5_B Ubiquitin-activating en 100.0 1.3E-32 4.4E-37 281.7 23.4 145 10-157 30-187 (434)
5 3h8v_A Ubiquitin-like modifier 100.0 2.6E-33 8.9E-38 272.2 11.4 200 2-216 16-235 (292)
6 1zud_1 Adenylyltransferase THI 100.0 2.1E-32 7E-37 262.3 13.6 154 2-157 9-164 (251)
7 2nvu_B Maltose binding protein 100.0 1.3E-30 4.4E-35 288.8 25.8 149 6-157 397-558 (805)
8 1y8q_B Anthracycline-, ubiquit 100.0 3.5E-31 1.2E-35 280.2 18.4 150 5-157 3-154 (640)
9 1jw9_B Molybdopterin biosynthe 100.0 1.2E-31 4.2E-36 256.7 13.0 154 2-157 12-167 (249)
10 3cmm_A Ubiquitin-activating en 100.0 9.5E-31 3.2E-35 291.0 14.7 156 2-157 408-572 (1015)
11 3h5n_A MCCB protein; ubiquitin 100.0 2E-29 6.7E-34 252.8 18.1 152 1-154 94-252 (353)
12 3rui_A Ubiquitin-like modifier 100.0 3E-29 1E-33 247.3 15.2 203 5-216 20-238 (340)
13 3vh1_A Ubiquitin-like modifier 100.0 1.7E-28 5.8E-33 256.8 14.7 208 2-216 303-531 (598)
14 4gsl_A Ubiquitin-like modifier 100.0 2.6E-28 8.8E-33 255.4 15.8 201 7-216 314-530 (615)
15 3dfz_A SIRC, precorrin-2 dehyd 97.5 0.00022 7.4E-09 66.1 8.5 96 16-144 28-123 (223)
16 2g1u_A Hypothetical protein TM 97.4 0.00045 1.5E-08 59.9 8.4 103 14-144 14-118 (155)
17 3llv_A Exopolyphosphatase-rela 97.3 0.00099 3.4E-08 56.5 8.9 97 17-142 4-101 (141)
18 2hmt_A YUAA protein; RCK, KTN, 97.3 0.0012 4.3E-08 55.5 9.3 37 15-52 2-38 (144)
19 3jyo_A Quinate/shikimate dehyd 97.2 0.00055 1.9E-08 65.8 7.1 79 17-120 125-203 (283)
20 3ic5_A Putative saccharopine d 97.1 0.002 6.7E-08 52.3 8.9 93 19-141 5-98 (118)
21 1lss_A TRK system potassium up 97.1 0.0014 4.9E-08 54.9 8.0 91 20-138 5-96 (140)
22 3tum_A Shikimate dehydrogenase 96.9 0.0031 1.1E-07 60.0 9.1 73 17-119 123-195 (269)
23 3l4b_C TRKA K+ channel protien 96.7 0.0026 8.8E-08 58.3 7.1 95 21-142 2-97 (218)
24 1id1_A Putative potassium chan 96.7 0.0045 1.5E-07 53.3 8.2 99 18-142 2-103 (153)
25 3tnl_A Shikimate dehydrogenase 96.6 0.0028 9.7E-08 61.7 6.9 83 17-120 152-235 (315)
26 1pjq_A CYSG, siroheme synthase 96.6 0.0068 2.3E-07 62.2 10.0 95 16-144 9-105 (457)
27 3c85_A Putative glutathione-re 96.5 0.0084 2.9E-07 53.1 8.8 92 17-136 37-130 (183)
28 1kyq_A Met8P, siroheme biosynt 96.4 0.0061 2.1E-07 58.1 7.7 114 16-143 10-141 (274)
29 3fwz_A Inner membrane protein 96.4 0.009 3.1E-07 50.6 8.0 88 19-135 7-95 (140)
30 3t4e_A Quinate/shikimate dehyd 96.4 0.0045 1.6E-07 60.2 6.8 84 17-120 146-229 (312)
31 3abi_A Putative uncharacterize 96.3 0.0097 3.3E-07 59.1 8.5 92 18-142 15-107 (365)
32 2aef_A Calcium-gated potassium 96.2 0.007 2.4E-07 55.9 6.6 95 18-142 8-103 (234)
33 2ph5_A Homospermidine synthase 96.2 0.018 6.1E-07 58.9 10.0 99 19-143 13-114 (480)
34 3gvi_A Malate dehydrogenase; N 96.1 0.014 4.8E-07 57.0 8.2 36 16-51 4-39 (324)
35 3pwz_A Shikimate dehydrogenase 96.0 0.0096 3.3E-07 56.7 6.5 74 17-121 118-191 (272)
36 3o8q_A Shikimate 5-dehydrogena 96.0 0.014 4.8E-07 55.9 7.5 74 17-121 124-197 (281)
37 2z2v_A Hypothetical protein PH 95.8 0.022 7.6E-07 56.6 8.5 93 17-142 14-107 (365)
38 3e8x_A Putative NAD-dependent 95.8 0.073 2.5E-06 48.7 11.4 39 12-51 14-53 (236)
39 4g65_A TRK system potassium up 95.7 0.0081 2.8E-07 61.7 4.8 98 20-144 4-102 (461)
40 3p7m_A Malate dehydrogenase; p 95.6 0.024 8.3E-07 55.3 7.7 75 17-119 3-81 (321)
41 2hk9_A Shikimate dehydrogenase 95.5 0.026 8.7E-07 53.7 7.5 35 17-52 127-161 (275)
42 3don_A Shikimate dehydrogenase 95.5 0.019 6.5E-07 54.8 6.3 112 17-140 115-230 (277)
43 2d4a_B Malate dehydrogenase; a 95.4 0.058 2E-06 52.2 9.5 71 21-119 1-75 (308)
44 3oj0_A Glutr, glutamyl-tRNA re 95.3 0.019 6.6E-07 48.7 5.3 35 16-51 18-52 (144)
45 4ina_A Saccharopine dehydrogen 95.3 0.039 1.3E-06 55.6 8.2 98 20-141 2-105 (405)
46 3tri_A Pyrroline-5-carboxylate 95.3 0.031 1.1E-06 53.3 7.1 34 18-51 2-37 (280)
47 3gpi_A NAD-dependent epimerase 95.2 0.12 4.1E-06 48.7 11.0 100 18-150 2-115 (286)
48 3vku_A L-LDH, L-lactate dehydr 95.2 0.046 1.6E-06 53.4 8.1 74 18-120 8-85 (326)
49 3u62_A Shikimate dehydrogenase 95.2 0.04 1.4E-06 51.8 7.4 36 17-53 107-142 (253)
50 3l9w_A Glutathione-regulated p 95.2 0.043 1.5E-06 55.4 8.1 96 19-143 4-101 (413)
51 2x0j_A Malate dehydrogenase; o 95.1 0.071 2.4E-06 51.2 9.0 71 21-119 2-77 (294)
52 2raf_A Putative dinucleotide-b 95.0 0.082 2.8E-06 47.9 8.9 36 15-51 15-50 (209)
53 3d0o_A L-LDH 1, L-lactate dehy 95.0 0.03 1E-06 54.5 6.2 37 15-51 2-39 (317)
54 3pqe_A L-LDH, L-lactate dehydr 94.9 0.046 1.6E-06 53.4 7.3 72 19-119 5-81 (326)
55 4e21_A 6-phosphogluconate dehy 94.9 0.036 1.2E-06 54.9 6.5 121 17-146 20-143 (358)
56 3ruf_A WBGU; rossmann fold, UD 94.9 0.19 6.5E-06 48.7 11.7 112 15-149 21-156 (351)
57 4ezb_A Uncharacterized conserv 94.8 0.11 3.8E-06 50.4 9.7 45 8-52 13-57 (317)
58 2hjr_A Malate dehydrogenase; m 94.8 0.072 2.5E-06 52.0 8.2 35 18-52 13-47 (328)
59 3d1l_A Putative NADP oxidoredu 94.8 0.075 2.6E-06 49.8 8.1 34 17-50 8-41 (266)
60 1lld_A L-lactate dehydrogenase 94.7 0.15 5.1E-06 49.2 10.2 34 19-52 7-41 (319)
61 1hyh_A L-hicdh, L-2-hydroxyiso 94.6 0.18 6E-06 48.6 10.6 32 20-51 2-34 (309)
62 1hdo_A Biliverdin IX beta redu 94.6 0.12 4.3E-06 45.6 8.9 34 19-53 3-37 (206)
63 3ew7_A LMO0794 protein; Q8Y8U8 94.5 0.19 6.4E-06 45.0 10.0 94 21-146 2-105 (221)
64 1ldn_A L-lactate dehydrogenase 94.5 0.1 3.6E-06 50.5 8.6 72 19-119 6-82 (316)
65 2b69_A UDP-glucuronate decarbo 94.5 0.24 8.4E-06 47.8 11.4 106 15-149 23-146 (343)
66 3tl2_A Malate dehydrogenase; c 94.5 0.077 2.6E-06 51.5 7.5 36 17-52 6-41 (315)
67 1t2d_A LDH-P, L-lactate dehydr 94.5 0.14 4.9E-06 49.7 9.5 32 20-51 5-36 (322)
68 1oju_A MDH, malate dehydrogena 94.4 0.11 3.6E-06 50.0 8.3 31 21-51 2-33 (294)
69 1lnq_A MTHK channels, potassiu 94.3 0.042 1.4E-06 53.7 5.4 89 19-137 115-203 (336)
70 4aj2_A L-lactate dehydrogenase 94.3 0.052 1.8E-06 53.1 5.9 77 15-119 15-95 (331)
71 3dqp_A Oxidoreductase YLBE; al 94.2 0.18 6.3E-06 45.3 9.3 96 21-146 2-108 (219)
72 2ewd_A Lactate dehydrogenase,; 94.2 0.11 3.7E-06 50.4 8.1 34 19-52 4-37 (317)
73 3h2s_A Putative NADH-flavin re 94.2 0.16 5.4E-06 45.7 8.8 94 21-146 2-107 (224)
74 3ius_A Uncharacterized conserv 94.2 0.39 1.3E-05 44.9 11.9 97 19-149 5-108 (286)
75 3doj_A AT3G25530, dehydrogenas 94.2 0.069 2.3E-06 51.6 6.6 51 2-53 2-54 (310)
76 3rku_A Oxidoreductase YMR226C; 94.1 0.26 8.8E-06 46.9 10.4 66 11-95 25-93 (287)
77 3ggo_A Prephenate dehydrogenas 94.1 0.22 7.4E-06 48.2 10.0 33 20-52 34-67 (314)
78 3m2p_A UDP-N-acetylglucosamine 94.1 0.16 5.5E-06 48.4 8.9 98 19-149 2-114 (311)
79 3obb_A Probable 3-hydroxyisobu 94.1 0.35 1.2E-05 46.5 11.2 117 20-147 4-126 (300)
80 3qsg_A NAD-binding phosphogluc 94.1 0.2 6.9E-06 48.3 9.6 35 18-52 23-57 (312)
81 3slg_A PBGP3 protein; structur 94.1 0.041 1.4E-06 54.1 4.7 40 12-52 17-58 (372)
82 1ur5_A Malate dehydrogenase; o 94.0 0.19 6.4E-06 48.6 9.3 32 20-51 3-34 (309)
83 3ldh_A Lactate dehydrogenase; 94.0 0.17 6E-06 49.3 9.0 33 18-50 20-53 (330)
84 4id9_A Short-chain dehydrogena 94.0 0.14 4.9E-06 49.5 8.4 39 13-52 13-52 (347)
85 3fi9_A Malate dehydrogenase; s 93.8 0.12 4.3E-06 50.7 7.6 35 17-51 6-42 (343)
86 1ez4_A Lactate dehydrogenase; 93.8 0.2 6.8E-06 48.6 8.9 72 20-120 6-81 (318)
87 3nep_X Malate dehydrogenase; h 93.6 0.28 9.6E-06 47.5 9.7 71 21-119 2-77 (314)
88 2v6b_A L-LDH, L-lactate dehydr 93.6 0.18 6.2E-06 48.5 8.3 32 21-52 2-34 (304)
89 4e12_A Diketoreductase; oxidor 93.6 0.11 3.8E-06 49.4 6.7 32 20-52 5-36 (283)
90 2d5c_A AROE, shikimate 5-dehyd 93.6 0.24 8E-06 46.5 8.9 34 17-52 115-148 (263)
91 1vl6_A Malate oxidoreductase; 93.6 0.054 1.8E-06 53.8 4.5 37 16-52 189-225 (388)
92 2zyd_A 6-phosphogluconate dehy 93.5 0.24 8.1E-06 51.0 9.5 127 14-145 10-140 (480)
93 4gwg_A 6-phosphogluconate dehy 93.5 0.11 3.7E-06 53.6 6.8 122 19-146 4-131 (484)
94 3vps_A TUNA, NAD-dependent epi 93.4 0.34 1.1E-05 46.0 9.9 37 16-53 4-41 (321)
95 2egg_A AROE, shikimate 5-dehyd 93.4 0.059 2E-06 51.9 4.4 35 17-51 139-173 (297)
96 2rcy_A Pyrroline carboxylate r 93.4 0.064 2.2E-06 50.1 4.6 34 19-52 4-40 (262)
97 3fbt_A Chorismate mutase and s 93.4 0.067 2.3E-06 51.1 4.6 35 17-51 120-154 (282)
98 3dhn_A NAD-dependent epimerase 93.3 0.53 1.8E-05 42.3 10.6 33 20-53 5-38 (227)
99 1a5z_A L-lactate dehydrogenase 93.3 0.14 4.6E-06 49.8 6.9 31 21-51 2-33 (319)
100 1lu9_A Methylene tetrahydromet 93.3 0.11 3.6E-06 49.6 6.0 34 17-51 117-151 (287)
101 2f1k_A Prephenate dehydrogenas 93.2 0.27 9.2E-06 46.2 8.7 30 21-51 2-31 (279)
102 3ko8_A NAD-dependent epimerase 93.2 0.54 1.8E-05 44.5 10.9 30 21-51 2-32 (312)
103 2a9f_A Putative malic enzyme ( 93.1 0.072 2.5E-06 53.0 4.5 38 16-53 185-222 (398)
104 3sxp_A ADP-L-glycero-D-mannohe 93.0 0.35 1.2E-05 47.1 9.5 34 17-51 8-44 (362)
105 2pv7_A T-protein [includes: ch 93.0 0.13 4.4E-06 49.3 6.1 32 20-52 22-54 (298)
106 3kkj_A Amine oxidase, flavin-c 93.0 0.092 3.1E-06 47.4 4.9 33 19-52 2-34 (336)
107 1yqg_A Pyrroline-5-carboxylate 93.0 0.11 3.8E-06 48.4 5.6 30 21-50 2-31 (263)
108 3ego_A Probable 2-dehydropanto 93.0 0.22 7.7E-06 47.9 7.8 31 19-51 2-32 (307)
109 1bg6_A N-(1-D-carboxylethyl)-L 92.9 0.13 4.4E-06 50.2 6.2 33 19-52 4-36 (359)
110 2axq_A Saccharopine dehydrogen 92.9 0.17 5.9E-06 51.8 7.2 38 16-53 20-57 (467)
111 1y1p_A ARII, aldehyde reductas 92.9 1.2 4.2E-05 42.4 13.1 110 17-149 9-137 (342)
112 1pzg_A LDH, lactate dehydrogen 92.8 0.39 1.3E-05 46.8 9.4 33 20-52 10-42 (331)
113 2zqz_A L-LDH, L-lactate dehydr 92.8 0.24 8.1E-06 48.3 7.8 72 19-119 9-84 (326)
114 2g5c_A Prephenate dehydrogenas 92.7 0.39 1.3E-05 45.2 9.0 32 20-51 2-34 (281)
115 1guz_A Malate dehydrogenase; o 92.6 0.48 1.7E-05 45.6 9.7 32 21-52 2-34 (310)
116 3nzo_A UDP-N-acetylglucosamine 92.6 0.49 1.7E-05 47.1 10.1 37 15-51 31-68 (399)
117 3g0o_A 3-hydroxyisobutyrate de 92.5 0.33 1.1E-05 46.4 8.3 33 19-52 7-39 (303)
118 1npy_A Hypothetical shikimate 92.5 0.12 4.1E-06 49.0 5.0 33 18-50 118-150 (271)
119 2p4q_A 6-phosphogluconate dehy 92.4 0.46 1.6E-05 49.0 9.8 125 18-146 9-137 (497)
120 4egb_A DTDP-glucose 4,6-dehydr 92.4 0.052 1.8E-06 52.7 2.4 35 17-51 22-58 (346)
121 4huj_A Uncharacterized protein 92.3 0.15 5.2E-06 46.5 5.4 31 19-50 23-54 (220)
122 2xxj_A L-LDH, L-lactate dehydr 92.3 0.34 1.2E-05 46.8 8.1 71 20-119 1-75 (310)
123 3pef_A 6-phosphogluconate dehy 92.3 0.15 5.1E-06 48.4 5.5 33 20-53 2-34 (287)
124 2bka_A CC3, TAT-interacting pr 92.3 1.3 4.4E-05 40.1 11.8 37 16-52 15-53 (242)
125 3pdu_A 3-hydroxyisobutyrate de 92.3 0.24 8.1E-06 47.0 6.9 33 20-53 2-34 (287)
126 2dvm_A Malic enzyme, 439AA lon 92.2 0.11 3.7E-06 52.7 4.6 35 16-50 183-219 (439)
127 1y6j_A L-lactate dehydrogenase 92.1 0.17 5.9E-06 49.0 5.8 34 19-52 7-41 (318)
128 3qha_A Putative oxidoreductase 92.1 0.092 3.1E-06 50.3 3.8 34 19-53 15-48 (296)
129 4gbj_A 6-phosphogluconate dehy 92.1 0.32 1.1E-05 46.6 7.6 115 19-147 5-126 (297)
130 2x6t_A ADP-L-glycero-D-manno-h 92.0 1.2 4E-05 43.2 11.8 39 14-52 41-80 (357)
131 1z82_A Glycerol-3-phosphate de 92.0 0.26 8.8E-06 47.9 6.9 33 18-51 13-45 (335)
132 2pzm_A Putative nucleotide sug 92.0 1.3 4.3E-05 42.5 11.9 37 15-52 16-53 (330)
133 1x7d_A Ornithine cyclodeaminas 92.0 0.38 1.3E-05 47.3 8.1 76 18-121 128-204 (350)
134 3b1f_A Putative prephenate deh 91.6 0.44 1.5E-05 45.0 8.0 34 18-51 5-39 (290)
135 2pgd_A 6-phosphogluconate dehy 91.6 0.6 2E-05 48.0 9.5 33 20-53 3-35 (482)
136 3phh_A Shikimate dehydrogenase 91.6 0.16 5.5E-06 48.0 4.7 32 19-51 118-149 (269)
137 3ehe_A UDP-glucose 4-epimerase 91.5 0.55 1.9E-05 44.6 8.6 29 20-50 2-31 (313)
138 1nyt_A Shikimate 5-dehydrogena 91.5 0.15 5.3E-06 48.1 4.5 33 17-50 117-149 (271)
139 4dll_A 2-hydroxy-3-oxopropiona 91.4 0.14 4.6E-06 49.7 4.1 36 17-53 29-64 (320)
140 1sb8_A WBPP; epimerase, 4-epim 91.4 0.6 2.1E-05 45.2 8.9 35 16-51 24-59 (352)
141 1omo_A Alanine dehydrogenase; 91.4 0.71 2.4E-05 44.7 9.3 73 18-121 124-197 (322)
142 1p9l_A Dihydrodipicolinate red 91.3 0.31 1E-05 45.5 6.3 31 21-51 2-34 (245)
143 3qvo_A NMRA family protein; st 91.3 0.48 1.6E-05 43.2 7.6 105 17-149 21-130 (236)
144 3i6i_A Putative leucoanthocyan 91.1 0.58 2E-05 45.3 8.4 103 17-141 8-116 (346)
145 4g65_A TRK system potassium up 91.1 0.84 2.9E-05 46.6 9.9 97 19-142 235-331 (461)
146 1o6z_A MDH, malate dehydrogena 91.1 0.75 2.6E-05 44.1 9.1 31 21-51 2-34 (303)
147 2h78_A Hibadh, 3-hydroxyisobut 91.1 1.1 3.9E-05 42.4 10.4 32 20-52 4-35 (302)
148 3hwr_A 2-dehydropantoate 2-red 91.1 0.51 1.7E-05 45.5 7.9 32 17-49 17-48 (318)
149 2iz1_A 6-phosphogluconate dehy 91.0 0.77 2.6E-05 47.0 9.6 33 19-52 5-37 (474)
150 3r6d_A NAD-dependent epimerase 91.0 0.61 2.1E-05 41.9 7.9 102 20-148 6-112 (221)
151 1gpj_A Glutamyl-tRNA reductase 90.9 0.18 6.2E-06 50.6 4.5 35 17-51 165-199 (404)
152 1p77_A Shikimate 5-dehydrogena 90.7 0.15 5E-06 48.3 3.6 34 17-51 117-150 (272)
153 2dc1_A L-aspartate dehydrogena 90.7 1.2 4E-05 40.8 9.7 32 21-52 2-33 (236)
154 2gas_A Isoflavone reductase; N 90.7 0.52 1.8E-05 44.5 7.5 102 19-141 2-109 (307)
155 2ywl_A Thioredoxin reductase r 90.7 0.24 8.3E-06 43.0 4.8 33 20-53 2-34 (180)
156 3dtt_A NADP oxidoreductase; st 90.6 0.24 8.2E-06 45.9 4.9 39 14-53 14-52 (245)
157 1qyc_A Phenylcoumaran benzylic 90.6 0.36 1.2E-05 45.7 6.2 101 19-141 4-110 (308)
158 3e48_A Putative nucleoside-dip 90.6 1.5 5.3E-05 40.8 10.6 97 21-146 2-108 (289)
159 1i36_A Conserved hypothetical 90.5 0.61 2.1E-05 43.3 7.7 29 21-50 2-30 (264)
160 3gvx_A Glycerate dehydrogenase 90.5 0.061 2.1E-06 51.6 0.6 44 9-53 112-155 (290)
161 3l6d_A Putative oxidoreductase 90.4 0.22 7.4E-06 47.9 4.5 35 18-53 8-42 (306)
162 2q1s_A Putative nucleotide sug 90.2 1.4 4.8E-05 43.1 10.4 37 16-52 29-66 (377)
163 1vl0_A DTDP-4-dehydrorhamnose 90.1 1.3 4.3E-05 41.5 9.6 36 16-52 9-45 (292)
164 1pgj_A 6PGDH, 6-PGDH, 6-phosph 90.1 0.26 8.8E-06 50.7 5.0 32 21-53 3-34 (478)
165 3enk_A UDP-glucose 4-epimerase 90.1 0.87 3E-05 43.6 8.6 32 19-51 5-37 (341)
166 1rkx_A CDP-glucose-4,6-dehydra 90.1 2.2 7.4E-05 41.2 11.5 37 15-52 5-42 (357)
167 3d4o_A Dipicolinate synthase s 90.0 0.26 8.7E-06 47.1 4.6 36 16-52 152-187 (293)
168 4gx0_A TRKA domain protein; me 90.0 1 3.5E-05 47.0 9.7 91 20-142 349-440 (565)
169 3t4x_A Oxidoreductase, short c 90.0 0.48 1.6E-05 44.2 6.4 58 16-93 7-65 (267)
170 3oh8_A Nucleoside-diphosphate 89.9 1.6 5.6E-05 44.9 11.1 33 19-52 147-180 (516)
171 2bll_A Protein YFBG; decarboxy 89.9 0.41 1.4E-05 46.0 6.1 31 21-52 2-34 (345)
172 3pp8_A Glyoxylate/hydroxypyruv 89.8 0.079 2.7E-06 51.4 0.8 44 9-53 129-172 (315)
173 2c5a_A GDP-mannose-3', 5'-epim 89.6 1.3 4.4E-05 43.5 9.5 33 19-52 29-62 (379)
174 2a35_A Hypothetical protein PA 89.6 1.7 5.7E-05 38.4 9.6 34 19-52 5-40 (215)
175 2rir_A Dipicolinate synthase, 89.6 0.28 9.7E-06 46.9 4.6 36 16-52 154-189 (300)
176 3hdj_A Probable ornithine cycl 89.6 0.45 1.5E-05 46.0 6.0 72 19-121 121-193 (313)
177 2ydy_A Methionine adenosyltran 89.4 1.2 4E-05 42.2 8.9 32 19-51 2-34 (315)
178 4hb9_A Similarities with proba 89.4 0.3 1E-05 48.0 4.8 33 19-52 1-33 (412)
179 3gg2_A Sugar dehydrogenase, UD 89.4 1.5 5.1E-05 44.5 10.1 33 20-53 3-35 (450)
180 1s6y_A 6-phospho-beta-glucosid 89.4 1.6 5.4E-05 44.4 10.2 94 19-137 7-111 (450)
181 1yb4_A Tartronic semialdehyde 89.3 0.63 2.1E-05 44.0 6.8 30 20-50 4-33 (295)
182 3lk7_A UDP-N-acetylmuramoylala 89.2 0.92 3.1E-05 46.0 8.3 36 17-53 7-42 (451)
183 1y81_A Conserved hypothetical 89.2 3.2 0.00011 34.7 10.4 39 12-51 7-49 (138)
184 2cul_A Glucose-inhibited divis 89.1 0.38 1.3E-05 43.9 4.9 34 18-52 2-35 (232)
185 3k96_A Glycerol-3-phosphate de 89.1 1.8 6E-05 42.5 10.0 33 19-52 29-61 (356)
186 3hg7_A D-isomer specific 2-hyd 89.1 0.097 3.3E-06 51.0 0.8 44 9-53 130-173 (324)
187 3rc1_A Sugar 3-ketoreductase; 89.0 1.2 4.1E-05 43.5 8.7 92 16-140 24-117 (350)
188 1nvt_A Shikimate 5'-dehydrogen 88.9 0.23 7.7E-06 47.3 3.3 32 17-50 126-157 (287)
189 1qyd_A Pinoresinol-lariciresin 88.9 1 3.6E-05 42.5 8.1 99 19-140 4-112 (313)
190 3ec7_A Putative dehydrogenase; 88.9 1.5 5.1E-05 42.9 9.4 94 16-140 20-115 (357)
191 3nv9_A Malic enzyme; rossmann 88.7 0.37 1.3E-05 48.7 4.7 40 15-54 215-256 (487)
192 1hye_A L-lactate/malate dehydr 88.7 1.4 4.9E-05 42.3 8.9 31 21-51 2-34 (313)
193 2j6i_A Formate dehydrogenase; 88.7 0.28 9.6E-06 48.5 3.9 37 16-52 161-197 (364)
194 2q1w_A Putative nucleotide sug 88.5 1 3.5E-05 43.2 7.8 36 16-52 18-54 (333)
195 2i6t_A Ubiquitin-conjugating e 88.5 1 3.5E-05 43.3 7.6 34 19-52 14-48 (303)
196 1np3_A Ketol-acid reductoisome 88.5 0.52 1.8E-05 46.0 5.6 36 15-51 12-47 (338)
197 3ghy_A Ketopantoate reductase 88.4 0.4 1.4E-05 46.6 4.8 32 19-51 3-34 (335)
198 3c1o_A Eugenol synthase; pheny 88.4 0.78 2.7E-05 43.7 6.8 102 19-141 4-110 (321)
199 2x4g_A Nucleoside-diphosphate- 88.4 1.8 6E-05 41.4 9.4 32 20-52 14-46 (342)
200 2ixa_A Alpha-N-acetylgalactosa 88.4 2.2 7.6E-05 43.0 10.5 98 15-139 16-118 (444)
201 2xdo_A TETX2 protein; tetracyc 88.4 0.32 1.1E-05 48.3 4.1 38 15-53 22-59 (398)
202 1yvv_A Amine oxidase, flavin-c 88.3 0.43 1.5E-05 45.6 4.9 34 19-53 2-35 (336)
203 3d1c_A Flavin-containing putat 88.3 0.32 1.1E-05 47.3 4.0 35 19-53 4-38 (369)
204 1xq6_A Unknown protein; struct 88.3 2.4 8.1E-05 38.3 9.8 35 18-52 3-39 (253)
205 1f0y_A HCDH, L-3-hydroxyacyl-C 88.3 0.42 1.4E-05 45.7 4.7 32 20-52 16-47 (302)
206 1u8x_X Maltose-6'-phosphate gl 88.2 1.9 6.6E-05 44.0 9.9 93 18-137 27-130 (472)
207 1dih_A Dihydrodipicolinate red 88.2 1.2 4.1E-05 42.1 7.8 96 19-144 5-104 (273)
208 2r6j_A Eugenol synthase 1; phe 88.0 1.2 4E-05 42.4 7.8 96 20-141 12-112 (318)
209 3c96_A Flavin-containing monoo 87.9 0.45 1.6E-05 47.3 4.9 35 19-53 4-38 (410)
210 3dje_A Fructosyl amine: oxygen 87.9 0.5 1.7E-05 47.3 5.2 36 19-54 6-41 (438)
211 4dgs_A Dehydrogenase; structur 87.9 0.21 7.2E-06 48.9 2.4 37 15-52 167-203 (340)
212 3sc6_A DTDP-4-dehydrorhamnose 87.9 0.58 2E-05 43.7 5.4 104 21-149 7-111 (287)
213 1ks9_A KPA reductase;, 2-dehyd 87.9 0.43 1.5E-05 44.8 4.5 32 21-53 2-33 (291)
214 2y0c_A BCEC, UDP-glucose dehyd 87.9 2.8 9.6E-05 42.9 10.9 35 18-53 7-41 (478)
215 1obb_A Maltase, alpha-glucosid 87.7 3.2 0.00011 42.5 11.1 92 19-137 3-105 (480)
216 2vhw_A Alanine dehydrogenase; 87.7 0.43 1.5E-05 47.4 4.5 35 16-51 165-199 (377)
217 3rp8_A Flavoprotein monooxygen 87.7 0.47 1.6E-05 47.1 4.8 39 14-53 18-56 (407)
218 1e6u_A GDP-fucose synthetase; 87.6 2.7 9.1E-05 39.7 10.0 32 19-51 3-35 (321)
219 2vns_A Metalloreductase steap3 87.5 0.57 1.9E-05 42.4 4.9 32 19-51 28-59 (215)
220 1pjc_A Protein (L-alanine dehy 87.4 0.46 1.6E-05 46.8 4.5 34 17-51 165-198 (361)
221 2vt3_A REX, redox-sensing tran 87.4 1.3 4.6E-05 40.2 7.3 87 19-140 85-173 (215)
222 3q2i_A Dehydrogenase; rossmann 87.2 1.7 5.8E-05 42.3 8.6 32 19-50 13-46 (354)
223 4f6c_A AUSA reductase domain p 87.2 1.7 6E-05 43.3 8.8 110 20-151 70-203 (427)
224 2dpo_A L-gulonate 3-dehydrogen 87.2 0.54 1.8E-05 45.6 4.8 35 17-52 4-38 (319)
225 1gy8_A UDP-galactose 4-epimera 87.2 3.5 0.00012 40.3 11.0 32 20-52 3-36 (397)
226 2ew2_A 2-dehydropantoate 2-red 87.1 0.5 1.7E-05 44.9 4.6 31 20-51 4-34 (316)
227 4b8w_A GDP-L-fucose synthase; 87.1 0.55 1.9E-05 44.2 4.8 27 17-43 4-31 (319)
228 2izz_A Pyrroline-5-carboxylate 87.1 0.53 1.8E-05 45.5 4.7 35 17-51 20-57 (322)
229 2yq5_A D-isomer specific 2-hyd 87.1 0.2 6.9E-06 49.2 1.7 38 15-53 144-181 (343)
230 1y56_B Sarcosine oxidase; dehy 87.1 0.57 2E-05 45.8 5.1 35 19-54 5-39 (382)
231 3i83_A 2-dehydropantoate 2-red 87.1 0.54 1.8E-05 45.3 4.7 32 20-52 3-34 (320)
232 3hn2_A 2-dehydropantoate 2-red 87.1 0.53 1.8E-05 45.2 4.6 32 20-52 3-34 (312)
233 1c0p_A D-amino acid oxidase; a 87.0 0.55 1.9E-05 45.7 4.9 36 19-55 6-41 (363)
234 3ijp_A DHPR, dihydrodipicolina 87.0 2.6 9E-05 40.0 9.4 106 12-147 13-122 (288)
235 3st7_A Capsular polysaccharide 87.0 0.77 2.6E-05 44.8 5.9 31 21-51 2-33 (369)
236 2jl1_A Triphenylmethane reduct 86.9 1.8 6.2E-05 40.2 8.3 98 20-147 1-110 (287)
237 3cgv_A Geranylgeranyl reductas 86.9 0.39 1.3E-05 47.1 3.7 35 18-53 3-37 (397)
238 4ej6_A Putative zinc-binding d 86.9 1 3.5E-05 44.3 6.8 32 19-50 183-214 (370)
239 3g17_A Similar to 2-dehydropan 86.9 0.5 1.7E-05 45.0 4.3 32 20-52 3-34 (294)
240 1r6d_A TDP-glucose-4,6-dehydra 86.9 2.8 9.7E-05 39.9 9.8 32 21-52 2-39 (337)
241 1mld_A Malate dehydrogenase; o 86.8 1.7 5.8E-05 41.9 8.1 32 21-52 2-35 (314)
242 1ek6_A UDP-galactose 4-epimera 86.8 3.7 0.00013 39.2 10.7 32 19-51 2-34 (348)
243 1ryi_A Glycine oxidase; flavop 86.7 0.48 1.6E-05 46.3 4.2 35 19-54 17-51 (382)
244 1z45_A GAL10 bifunctional prot 86.7 2.3 8E-05 45.4 10.0 36 15-51 7-43 (699)
245 1orr_A CDP-tyvelose-2-epimeras 86.6 2.2 7.7E-05 40.7 9.0 31 20-51 2-33 (347)
246 4a2c_A Galactitol-1-phosphate 86.6 1.2 4.1E-05 43.1 7.0 34 18-51 160-193 (346)
247 3fpf_A Mtnas, putative unchara 86.6 4.9 0.00017 38.3 11.1 75 18-120 122-197 (298)
248 3vrd_B FCCB subunit, flavocyto 86.6 0.58 2E-05 46.3 4.8 35 19-53 2-37 (401)
249 2eez_A Alanine dehydrogenase; 86.5 0.55 1.9E-05 46.4 4.5 35 16-51 163-197 (369)
250 1pl8_A Human sorbitol dehydrog 86.4 1.5 5.1E-05 42.7 7.6 33 19-51 172-204 (356)
251 3lyl_A 3-oxoacyl-(acyl-carrier 86.4 1.2 4E-05 40.7 6.5 33 17-50 3-36 (247)
252 2hun_A 336AA long hypothetical 86.3 1.5 5.3E-05 41.8 7.6 34 19-52 3-38 (336)
253 3ftp_A 3-oxoacyl-[acyl-carrier 86.3 0.86 2.9E-05 42.7 5.6 41 9-50 17-59 (270)
254 3nyw_A Putative oxidoreductase 86.3 1.3 4.5E-05 40.8 6.8 52 16-87 4-56 (250)
255 3oz2_A Digeranylgeranylglycero 86.1 0.57 2E-05 45.6 4.4 32 19-51 4-35 (397)
256 1yb1_A 17-beta-hydroxysteroid 86.1 0.99 3.4E-05 42.1 5.9 34 16-50 28-62 (272)
257 3evt_A Phosphoglycerate dehydr 86.0 0.65 2.2E-05 45.1 4.6 43 9-52 126-169 (324)
258 3jtm_A Formate dehydrogenase, 86.0 0.47 1.6E-05 46.7 3.6 42 9-51 150-195 (351)
259 1leh_A Leucine dehydrogenase; 85.9 0.63 2.2E-05 46.0 4.6 35 16-51 170-204 (364)
260 3rft_A Uronate dehydrogenase; 85.9 0.8 2.7E-05 42.6 5.1 34 19-53 3-37 (267)
261 3fbs_A Oxidoreductase; structu 85.8 0.72 2.5E-05 43.0 4.8 33 20-53 3-35 (297)
262 3c7a_A Octopine dehydrogenase; 85.8 0.7 2.4E-05 46.0 4.9 30 20-50 3-33 (404)
263 4a9w_A Monooxygenase; baeyer-v 85.7 0.51 1.8E-05 45.2 3.8 33 19-52 3-35 (357)
264 3euw_A MYO-inositol dehydrogen 85.7 1.7 5.9E-05 42.1 7.6 88 20-140 5-93 (344)
265 3mz0_A Inositol 2-dehydrogenas 85.5 5.1 0.00018 38.6 11.0 31 20-50 3-35 (344)
266 2uzz_A N-methyl-L-tryptophan o 85.5 0.5 1.7E-05 46.0 3.6 35 19-54 2-36 (372)
267 2ekl_A D-3-phosphoglycerate de 85.5 0.68 2.3E-05 44.7 4.5 35 16-51 139-173 (313)
268 3hhp_A Malate dehydrogenase; M 85.5 1.5 5.1E-05 42.3 6.9 31 21-51 2-35 (312)
269 3alj_A 2-methyl-3-hydroxypyrid 85.5 0.71 2.4E-05 45.3 4.7 36 17-53 9-44 (379)
270 3ond_A Adenosylhomocysteinase; 85.4 0.67 2.3E-05 47.5 4.6 35 17-52 263-297 (488)
271 3uuw_A Putative oxidoreductase 85.4 2.4 8.2E-05 40.3 8.4 35 17-51 4-40 (308)
272 2d0i_A Dehydrogenase; structur 85.4 0.61 2.1E-05 45.5 4.1 37 15-52 142-178 (333)
273 1j4a_A D-LDH, D-lactate dehydr 85.3 0.79 2.7E-05 44.6 4.9 35 16-51 143-177 (333)
274 1x13_A NAD(P) transhydrogenase 85.2 0.66 2.3E-05 46.5 4.4 36 17-53 170-205 (401)
275 3ba1_A HPPR, hydroxyphenylpyru 85.1 0.7 2.4E-05 45.0 4.4 36 16-52 161-196 (333)
276 3m6i_A L-arabinitol 4-dehydrog 85.1 1.8 6.1E-05 42.3 7.5 32 19-50 180-211 (363)
277 2gcg_A Glyoxylate reductase/hy 85.1 0.67 2.3E-05 45.1 4.3 36 16-52 152-187 (330)
278 2gf3_A MSOX, monomeric sarcosi 85.1 0.69 2.4E-05 45.2 4.5 35 19-54 3-37 (389)
279 3fg2_P Putative rubredoxin red 85.1 0.83 2.9E-05 45.3 5.1 35 19-53 1-36 (404)
280 1zej_A HBD-9, 3-hydroxyacyl-CO 85.0 0.78 2.7E-05 43.9 4.6 32 18-51 11-42 (293)
281 3s55_A Putative short-chain de 85.0 0.59 2E-05 43.9 3.8 41 11-52 2-43 (281)
282 3cky_A 2-hydroxymethyl glutara 84.9 0.82 2.8E-05 43.3 4.8 32 19-51 4-35 (301)
283 2cuk_A Glycerate dehydrogenase 84.9 0.76 2.6E-05 44.3 4.5 37 16-53 141-177 (311)
284 3dme_A Conserved exported prot 84.9 0.67 2.3E-05 44.7 4.2 33 19-52 4-36 (369)
285 3pxx_A Carveol dehydrogenase; 84.9 1.2 4.2E-05 41.6 6.0 38 14-52 5-43 (287)
286 1iy9_A Spermidine synthase; ro 84.9 1.3 4.5E-05 41.7 6.1 34 18-53 75-109 (275)
287 2dbq_A Glyoxylate reductase; D 84.8 0.75 2.6E-05 44.8 4.5 35 16-51 147-181 (334)
288 3adn_A Spermidine synthase; am 84.8 1.7 5.8E-05 41.4 6.9 32 18-52 83-116 (294)
289 3cea_A MYO-inositol 2-dehydrog 84.8 2 6.8E-05 41.5 7.6 32 19-50 8-41 (346)
290 1n7h_A GDP-D-mannose-4,6-dehyd 84.8 5.3 0.00018 38.8 10.8 32 20-52 29-61 (381)
291 3lf2_A Short chain oxidoreduct 84.7 2 6.8E-05 39.9 7.3 34 17-51 6-40 (265)
292 1sby_A Alcohol dehydrogenase; 84.7 0.87 3E-05 41.9 4.7 35 17-51 3-38 (254)
293 3nix_A Flavoprotein/dehydrogen 84.7 0.72 2.4E-05 45.7 4.4 35 19-54 5-39 (421)
294 2vou_A 2,6-dihydroxypyridine h 84.7 0.77 2.6E-05 45.4 4.6 35 18-53 4-38 (397)
295 4hkt_A Inositol 2-dehydrogenas 84.6 3.8 0.00013 39.3 9.5 32 20-51 4-36 (331)
296 3qy9_A DHPR, dihydrodipicolina 84.6 1.5 5E-05 40.7 6.2 32 20-52 4-36 (243)
297 1xdw_A NAD+-dependent (R)-2-hy 84.5 0.81 2.8E-05 44.5 4.6 38 15-53 142-179 (331)
298 3gt0_A Pyrroline-5-carboxylate 84.5 0.87 3E-05 42.0 4.6 32 20-51 3-37 (247)
299 5mdh_A Malate dehydrogenase; o 84.5 2.4 8.1E-05 41.2 7.9 76 20-119 4-87 (333)
300 2gf2_A Hibadh, 3-hydroxyisobut 84.5 0.85 2.9E-05 43.1 4.6 31 21-52 2-32 (296)
301 3fef_A Putative glucosidase LP 84.5 1.1 3.8E-05 45.4 5.7 103 18-149 4-115 (450)
302 3ihm_A Styrene monooxygenase A 84.4 0.69 2.4E-05 46.5 4.2 33 20-53 23-55 (430)
303 1jay_A Coenzyme F420H2:NADP+ o 84.4 0.85 2.9E-05 40.7 4.4 30 21-51 2-32 (212)
304 3h7a_A Short chain dehydrogena 84.4 1.7 5.7E-05 40.1 6.5 35 16-51 4-39 (252)
305 2glx_A 1,5-anhydro-D-fructose 84.3 4.2 0.00014 38.9 9.7 32 21-52 2-34 (332)
306 3p2y_A Alanine dehydrogenase/p 84.3 0.74 2.5E-05 45.7 4.2 36 17-53 182-217 (381)
307 1k0i_A P-hydroxybenzoate hydro 84.2 0.87 3E-05 44.7 4.8 34 19-53 2-35 (394)
308 2ho3_A Oxidoreductase, GFO/IDH 84.2 2.3 7.8E-05 40.8 7.6 30 21-50 3-33 (325)
309 3ip3_A Oxidoreductase, putativ 84.2 1.3 4.6E-05 42.8 6.0 93 20-140 3-95 (337)
310 3tsc_A Putative oxidoreductase 84.1 3 0.0001 38.8 8.3 36 16-52 8-44 (277)
311 1wwk_A Phosphoglycerate dehydr 84.0 0.87 3E-05 43.8 4.5 37 15-52 138-174 (307)
312 1iy8_A Levodione reductase; ox 84.0 2.6 8.7E-05 39.0 7.7 34 16-50 10-44 (267)
313 3rkr_A Short chain oxidoreduct 84.0 0.97 3.3E-05 41.9 4.8 37 14-51 24-61 (262)
314 4ea9_A Perosamine N-acetyltran 84.0 6.7 0.00023 35.2 10.4 36 18-53 11-46 (220)
315 2uyy_A N-PAC protein; long-cha 84.0 0.94 3.2E-05 43.3 4.8 32 20-52 31-62 (316)
316 3un1_A Probable oxidoreductase 84.0 2.7 9.3E-05 38.9 7.8 40 14-54 23-63 (260)
317 3e03_A Short chain dehydrogena 84.0 2.6 8.8E-05 39.3 7.7 36 17-53 4-40 (274)
318 1tlt_A Putative oxidoreductase 83.9 4.3 0.00015 38.7 9.5 34 18-51 4-39 (319)
319 2pi1_A D-lactate dehydrogenase 83.9 0.99 3.4E-05 44.0 4.9 37 15-52 137-173 (334)
320 1gdh_A D-glycerate dehydrogena 83.8 0.85 2.9E-05 44.2 4.3 35 16-51 143-177 (320)
321 3i3l_A Alkylhalidase CMLS; fla 83.8 0.81 2.8E-05 48.3 4.5 36 17-53 21-56 (591)
322 4fn4_A Short chain dehydrogena 83.8 2.4 8.2E-05 39.5 7.3 52 16-87 4-56 (254)
323 2yy7_A L-threonine dehydrogena 83.8 4.3 0.00015 38.0 9.4 34 19-52 2-37 (312)
324 1evy_A Glycerol-3-phosphate de 83.8 0.26 8.8E-06 48.5 0.6 30 21-51 17-46 (366)
325 1mx3_A CTBP1, C-terminal bindi 83.7 0.85 2.9E-05 44.7 4.3 36 16-52 165-200 (347)
326 2hrz_A AGR_C_4963P, nucleoside 83.7 2.1 7.1E-05 41.0 7.2 36 17-52 12-54 (342)
327 3qiv_A Short-chain dehydrogena 83.7 1.6 5.6E-05 39.9 6.2 34 16-50 6-40 (253)
328 7mdh_A Protein (malate dehydro 83.7 4 0.00014 40.3 9.2 78 19-119 32-116 (375)
329 3db2_A Putative NADPH-dependen 83.7 3.1 0.00011 40.4 8.4 33 19-51 5-38 (354)
330 1mjf_A Spermidine synthase; sp 83.7 2.2 7.5E-05 40.2 7.1 34 18-53 75-108 (281)
331 1dxy_A D-2-hydroxyisocaproate 83.7 0.93 3.2E-05 44.1 4.6 36 16-52 142-177 (333)
332 3axb_A Putative oxidoreductase 83.7 1.2 4.3E-05 44.5 5.7 38 17-54 21-59 (448)
333 3bio_A Oxidoreductase, GFO/IDH 83.6 1.9 6.5E-05 41.2 6.7 35 17-51 7-42 (304)
334 2c20_A UDP-glucose 4-epimerase 83.5 7.9 0.00027 36.5 11.2 32 20-52 2-34 (330)
335 3f9i_A 3-oxoacyl-[acyl-carrier 83.5 1.6 5.6E-05 39.8 6.1 34 16-50 11-45 (249)
336 1n2s_A DTDP-4-, DTDP-glucose o 83.5 1.7 5.7E-05 40.7 6.2 107 21-149 2-109 (299)
337 2oln_A NIKD protein; flavoprot 83.5 1 3.5E-05 44.3 4.9 34 20-54 5-38 (397)
338 2qcu_A Aerobic glycerol-3-phos 83.4 1.1 3.7E-05 46.1 5.2 37 18-55 2-38 (501)
339 1xg5_A ARPG836; short chain de 83.4 2.5 8.7E-05 39.3 7.5 35 15-50 28-63 (279)
340 1b8p_A Protein (malate dehydro 83.4 3 0.0001 40.3 8.2 32 20-51 6-44 (329)
341 4gx0_A TRKA domain protein; me 83.3 1.6 5.4E-05 45.5 6.5 35 18-53 126-160 (565)
342 2q0l_A TRXR, thioredoxin reduc 83.3 1 3.5E-05 42.4 4.7 33 20-52 2-34 (311)
343 1f8f_A Benzyl alcohol dehydrog 83.2 1.3 4.5E-05 43.4 5.6 32 19-50 191-222 (371)
344 3e82_A Putative oxidoreductase 83.2 6 0.0002 38.6 10.3 32 19-50 7-40 (364)
345 2o7s_A DHQ-SDH PR, bifunctiona 83.1 0.81 2.8E-05 47.5 4.1 35 16-51 361-395 (523)
346 1qp8_A Formate dehydrogenase; 83.1 1 3.5E-05 43.3 4.5 36 16-52 121-156 (303)
347 3awd_A GOX2181, putative polyo 83.1 2.3 8E-05 38.9 7.0 33 17-50 11-44 (260)
348 2aqj_A Tryptophan halogenase, 83.1 1 3.5E-05 46.6 4.9 35 19-54 5-42 (538)
349 2yvl_A TRMI protein, hypotheti 83.1 7.3 0.00025 35.1 10.3 99 18-142 91-190 (248)
350 1ff9_A Saccharopine reductase; 83.1 0.95 3.2E-05 46.0 4.5 35 18-53 2-36 (450)
351 1xq1_A Putative tropinone redu 83.0 1.2 4.2E-05 41.1 5.0 33 17-50 12-45 (266)
352 2cvz_A Dehydrogenase, 3-hydrox 83.0 1 3.5E-05 42.3 4.5 30 20-51 2-31 (289)
353 3eag_A UDP-N-acetylmuramate:L- 83.0 4.7 0.00016 38.8 9.3 32 20-52 5-37 (326)
354 4dio_A NAD(P) transhydrogenase 82.9 0.95 3.2E-05 45.3 4.3 36 17-53 188-223 (405)
355 2gag_B Heterotetrameric sarcos 82.9 0.91 3.1E-05 44.6 4.3 37 19-55 21-58 (405)
356 3u95_A Glycoside hydrolase, fa 82.8 1.7 5.9E-05 44.5 6.4 76 21-119 2-84 (477)
357 2gv8_A Monooxygenase; FMO, FAD 82.8 0.83 2.8E-05 46.0 4.0 35 18-52 5-40 (447)
358 3itj_A Thioredoxin reductase 1 82.7 1.2 4.2E-05 42.2 5.0 35 18-53 21-55 (338)
359 2w2k_A D-mandelate dehydrogena 82.7 0.98 3.4E-05 44.2 4.3 36 16-52 160-196 (348)
360 3qlj_A Short chain dehydrogena 82.7 1.4 4.7E-05 42.3 5.4 42 10-52 18-60 (322)
361 2o4c_A Erythronate-4-phosphate 82.6 1.1 3.9E-05 44.4 4.8 35 16-51 113-147 (380)
362 4dqv_A Probable peptide synthe 82.6 2.8 9.4E-05 42.7 7.9 35 17-51 71-108 (478)
363 1vpd_A Tartronate semialdehyde 82.6 1.1 3.7E-05 42.4 4.5 31 20-51 6-36 (299)
364 3nyc_A D-arginine dehydrogenas 82.6 1.9 6.7E-05 41.6 6.5 33 18-52 8-40 (381)
365 3i1j_A Oxidoreductase, short c 82.6 2.2 7.4E-05 38.8 6.5 36 15-51 10-46 (247)
366 3e05_A Precorrin-6Y C5,15-meth 82.6 10 0.00034 33.1 10.8 77 18-120 40-117 (204)
367 4g2n_A D-isomer specific 2-hyd 82.5 1 3.4E-05 44.2 4.3 37 15-52 169-205 (345)
368 2fk8_A Methoxy mycolic acid sy 82.5 7 0.00024 37.0 10.3 71 19-118 91-162 (318)
369 2ejw_A HDH, homoserine dehydro 82.5 4.9 0.00017 39.0 9.2 86 19-142 3-97 (332)
370 1txg_A Glycerol-3-phosphate de 82.5 0.98 3.3E-05 43.4 4.2 30 21-51 2-31 (335)
371 1l7d_A Nicotinamide nucleotide 82.5 0.91 3.1E-05 45.1 4.0 36 16-52 169-204 (384)
372 3oet_A Erythronate-4-phosphate 82.5 1.2 4E-05 44.3 4.8 35 16-51 116-150 (381)
373 3gg9_A D-3-phosphoglycerate de 82.4 1 3.6E-05 44.1 4.4 36 15-51 156-191 (352)
374 1pj5_A N,N-dimethylglycine oxi 82.4 1.1 3.9E-05 49.0 5.2 36 19-54 4-39 (830)
375 3aog_A Glutamate dehydrogenase 82.3 5.8 0.0002 40.0 9.8 36 17-52 233-268 (440)
376 3evn_A Oxidoreductase, GFO/IDH 82.3 5.8 0.0002 38.0 9.7 36 18-53 4-40 (329)
377 2i99_A MU-crystallin homolog; 82.3 1.1 3.6E-05 43.2 4.3 35 17-51 133-168 (312)
378 3c1a_A Putative oxidoreductase 82.2 3 0.0001 39.8 7.5 34 19-52 10-44 (315)
379 3f8d_A Thioredoxin reductase ( 82.0 1.3 4.3E-05 41.7 4.8 33 19-52 15-47 (323)
380 2p2s_A Putative oxidoreductase 82.0 8.9 0.0003 36.7 11.0 35 18-52 3-38 (336)
381 1oc2_A DTDP-glucose 4,6-dehydr 81.9 5.5 0.00019 38.0 9.4 33 20-52 5-39 (348)
382 3lzw_A Ferredoxin--NADP reduct 81.9 1.2 4.2E-05 42.1 4.6 34 19-53 7-40 (332)
383 2g76_A 3-PGDH, D-3-phosphoglyc 81.9 1.1 3.8E-05 43.7 4.3 35 16-51 162-196 (335)
384 3gdo_A Uncharacterized oxidore 81.9 4.7 0.00016 39.2 9.0 33 19-51 5-39 (358)
385 1jg1_A PIMT;, protein-L-isoasp 81.8 4.6 0.00016 36.4 8.4 102 18-146 91-193 (235)
386 3c24_A Putative oxidoreductase 81.8 1.2 4.1E-05 42.0 4.5 30 20-50 12-42 (286)
387 1z7e_A Protein aRNA; rossmann 81.8 1.1 3.8E-05 47.7 4.7 35 17-52 313-349 (660)
388 2x3n_A Probable FAD-dependent 81.7 1.2 4.1E-05 43.9 4.6 34 19-53 6-39 (399)
389 2zbw_A Thioredoxin reductase; 81.7 1.3 4.4E-05 42.3 4.7 33 19-52 5-37 (335)
390 2bry_A NEDD9 interacting prote 81.6 1.3 4.4E-05 45.6 4.9 33 19-52 92-124 (497)
391 3pgx_A Carveol dehydrogenase; 81.6 3.3 0.00011 38.6 7.5 37 15-52 11-48 (280)
392 2gn4_A FLAA1 protein, UDP-GLCN 81.6 1.3 4.5E-05 43.0 4.8 35 17-51 19-55 (344)
393 2e4g_A Tryptophan halogenase; 81.6 1.2 4.3E-05 46.2 4.9 35 19-54 25-62 (550)
394 1x0v_A GPD-C, GPDH-C, glycerol 81.6 0.59 2E-05 45.5 2.3 34 19-52 8-47 (354)
395 2nu8_A Succinyl-COA ligase [AD 81.6 4.4 0.00015 38.4 8.4 116 18-146 6-125 (288)
396 4imr_A 3-oxoacyl-(acyl-carrier 81.6 2.5 8.6E-05 39.5 6.6 40 11-51 25-65 (275)
397 4fb5_A Probable oxidoreductase 81.6 4.4 0.00015 39.5 8.7 25 15-39 21-45 (393)
398 3uko_A Alcohol dehydrogenase c 81.6 1.8 6.2E-05 42.5 5.9 32 19-50 194-225 (378)
399 4h7p_A Malate dehydrogenase; s 81.5 2.3 8E-05 41.5 6.5 81 16-119 21-108 (345)
400 2qa1_A PGAE, polyketide oxygen 81.5 1.3 4.5E-05 45.5 5.0 37 15-52 7-43 (500)
401 1f06_A MESO-diaminopimelate D- 81.4 2.5 8.7E-05 40.6 6.7 34 19-52 3-37 (320)
402 4e5n_A Thermostable phosphite 81.3 0.86 2.9E-05 44.3 3.3 36 16-52 142-177 (330)
403 1rp0_A ARA6, thiazole biosynth 81.3 1.5 5.2E-05 41.2 5.0 36 17-53 37-73 (284)
404 1zcj_A Peroxisomal bifunctiona 81.3 1.2 4E-05 45.5 4.4 33 19-52 37-69 (463)
405 3v76_A Flavoprotein; structura 81.2 1.3 4.6E-05 44.4 4.8 35 18-53 26-60 (417)
406 2dtx_A Glucose 1-dehydrogenase 81.2 4.1 0.00014 37.7 7.9 36 16-52 5-41 (264)
407 3orf_A Dihydropteridine reduct 81.0 1.4 4.7E-05 40.6 4.5 47 6-53 9-56 (251)
408 3sc4_A Short chain dehydrogena 81.0 3.5 0.00012 38.7 7.4 36 17-53 7-43 (285)
409 3o9z_A Lipopolysaccaride biosy 81.0 6.4 0.00022 37.5 9.4 33 20-52 4-37 (312)
410 2zcu_A Uncharacterized oxidore 81.0 2.6 8.9E-05 39.0 6.5 98 21-148 1-108 (286)
411 3gaf_A 7-alpha-hydroxysteroid 80.9 2.2 7.6E-05 39.3 5.9 34 16-50 9-43 (256)
412 3o38_A Short chain dehydrogena 80.9 1 3.6E-05 41.7 3.6 35 16-51 19-55 (266)
413 3ce6_A Adenosylhomocysteinase; 80.9 1.3 4.4E-05 45.6 4.6 35 17-52 272-306 (494)
414 2rgh_A Alpha-glycerophosphate 80.8 2 6.8E-05 44.9 6.2 36 19-55 32-67 (571)
415 3sju_A Keto reductase; short-c 80.8 2.7 9.4E-05 39.3 6.6 34 16-50 21-55 (279)
416 3ktd_A Prephenate dehydrogenas 80.8 1.5 5.1E-05 42.9 4.8 33 19-52 8-40 (341)
417 3rd5_A Mypaa.01249.C; ssgcid, 80.7 0.85 2.9E-05 43.0 3.0 43 9-52 6-49 (291)
418 3h9u_A Adenosylhomocysteinase; 80.6 1.4 4.7E-05 44.5 4.6 37 16-53 208-244 (436)
419 3ip1_A Alcohol dehydrogenase, 80.6 2.8 9.7E-05 41.6 7.0 32 19-50 214-245 (404)
420 2ahr_A Putative pyrroline carb 80.6 1.1 3.9E-05 41.4 3.7 31 20-51 4-34 (259)
421 3kux_A Putative oxidoreductase 80.4 6 0.0002 38.3 9.1 33 19-51 7-41 (352)
422 1oaa_A Sepiapterin reductase; 80.4 2.5 8.4E-05 38.9 6.1 33 17-50 4-40 (259)
423 3pwk_A Aspartate-semialdehyde 80.4 6.9 0.00024 38.5 9.5 91 20-142 3-94 (366)
424 1kpg_A CFA synthase;, cyclopro 80.4 11 0.00036 35.0 10.6 71 19-118 65-136 (287)
425 1xhc_A NADH oxidase /nitrite r 80.3 1.1 3.7E-05 44.0 3.7 33 19-53 8-40 (367)
426 3ado_A Lambda-crystallin; L-gu 80.3 1.6 5.6E-05 42.1 4.9 33 19-52 6-38 (319)
427 3u3x_A Oxidoreductase; structu 80.3 7.7 0.00026 37.8 10.0 92 17-140 24-116 (361)
428 1yj8_A Glycerol-3-phosphate de 80.3 0.93 3.2E-05 44.7 3.2 33 20-52 22-60 (375)
429 3klj_A NAD(FAD)-dependent dehy 80.3 2.1 7.1E-05 42.3 5.8 33 19-52 146-178 (385)
430 3grp_A 3-oxoacyl-(acyl carrier 80.3 0.7 2.4E-05 43.2 2.2 41 9-50 17-58 (266)
431 3mog_A Probable 3-hydroxybutyr 80.2 1.5 5.2E-05 44.9 4.9 33 19-52 5-37 (483)
432 3f1l_A Uncharacterized oxidore 80.2 1.6 5.5E-05 40.2 4.7 36 15-51 8-44 (252)
433 1v8b_A Adenosylhomocysteinase; 80.2 1.3 4.5E-05 45.2 4.4 37 16-53 254-290 (479)
434 2gqw_A Ferredoxin reductase; f 80.2 1.5 5.3E-05 43.5 4.8 35 19-53 7-42 (408)
435 2gqf_A Hypothetical protein HI 80.2 1.3 4.5E-05 44.1 4.3 35 18-53 3-37 (401)
436 2weu_A Tryptophan 5-halogenase 80.2 1.1 3.6E-05 46.0 3.7 34 20-54 3-39 (511)
437 4f6l_B AUSA reductase domain p 80.1 4.1 0.00014 41.6 8.2 110 20-151 151-284 (508)
438 3cty_A Thioredoxin reductase; 80.1 1.6 5.4E-05 41.4 4.7 33 19-52 16-48 (319)
439 3r1i_A Short-chain type dehydr 80.1 4 0.00014 38.1 7.5 35 16-51 29-64 (276)
440 3keo_A Redox-sensing transcrip 80.0 0.94 3.2E-05 41.2 2.8 92 19-142 84-178 (212)
441 3ioy_A Short-chain dehydrogena 79.9 3.1 0.0001 39.9 6.7 35 16-51 5-40 (319)
442 2q7v_A Thioredoxin reductase; 79.9 1.6 5.5E-05 41.5 4.7 33 19-52 8-40 (325)
443 3atr_A Conserved archaeal prot 79.9 1.1 3.7E-05 45.2 3.7 34 19-53 6-39 (453)
444 4hy3_A Phosphoglycerate oxidor 79.9 1.2 3.9E-05 44.1 3.7 36 15-51 172-207 (365)
445 4e6p_A Probable sorbitol dehyd 79.8 1.4 4.6E-05 40.8 4.0 36 15-51 4-40 (259)
446 3pk0_A Short-chain dehydrogena 79.8 0.61 2.1E-05 43.4 1.6 36 15-51 6-42 (262)
447 3kd9_A Coenzyme A disulfide re 79.8 1.5 5.1E-05 44.2 4.6 36 18-53 2-38 (449)
448 4eso_A Putative oxidoreductase 79.8 1.4 4.7E-05 40.8 4.0 36 15-51 4-40 (255)
449 3e9m_A Oxidoreductase, GFO/IDH 79.8 3.3 0.00011 39.8 6.9 33 18-50 4-37 (330)
450 1fmc_A 7 alpha-hydroxysteroid 79.7 2.5 8.5E-05 38.5 5.8 34 16-50 8-42 (255)
451 2qa2_A CABE, polyketide oxygen 79.7 1.4 4.7E-05 45.3 4.4 35 17-52 10-44 (499)
452 2yjz_A Metalloreductase steap4 80.9 0.37 1.2E-05 43.4 0.0 34 17-51 17-50 (201)
453 3k6j_A Protein F01G10.3, confi 79.7 1.6 5.4E-05 44.5 4.7 33 20-53 55-87 (460)
454 3ihg_A RDME; flavoenzyme, anth 79.6 1.3 4.3E-05 45.8 4.1 34 19-53 5-38 (535)
455 4iiu_A 3-oxoacyl-[acyl-carrier 79.6 2.3 8E-05 39.3 5.6 31 15-45 22-53 (267)
456 3c4n_A Uncharacterized protein 79.6 1.5 5.1E-05 43.5 4.5 45 8-54 24-72 (405)
457 3g79_A NDP-N-acetyl-D-galactos 79.6 1.7 5.9E-05 44.4 5.0 43 12-54 11-54 (478)
458 3ezy_A Dehydrogenase; structur 79.5 5.6 0.00019 38.4 8.6 31 20-50 3-34 (344)
459 3tjr_A Short chain dehydrogena 79.5 3.6 0.00012 39.0 7.0 33 17-50 29-62 (301)
460 3ucx_A Short chain dehydrogena 79.4 3.7 0.00013 38.0 6.9 34 16-50 8-42 (264)
461 1ydw_A AX110P-like protein; st 79.3 11 0.00038 36.5 10.7 32 19-50 6-38 (362)
462 3n58_A Adenosylhomocysteinase; 79.2 1.6 5.5E-05 44.1 4.5 35 17-52 245-279 (464)
463 3fmw_A Oxygenase; mithramycin, 79.2 1.6 5.5E-05 45.7 4.8 34 19-53 49-82 (570)
464 3hyw_A Sulfide-quinone reducta 79.1 1.6 5.6E-05 43.7 4.7 35 19-53 2-37 (430)
465 3m2t_A Probable dehydrogenase; 79.1 2.6 9.1E-05 41.1 6.1 36 18-53 4-41 (359)
466 3ab1_A Ferredoxin--NADP reduct 78.9 1.5 5.2E-05 42.4 4.2 33 19-52 14-46 (360)
467 2vdc_G Glutamate synthase [NAD 78.9 1.7 5.7E-05 44.2 4.6 33 19-52 122-154 (456)
468 1zk7_A HGII, reductase, mercur 78.8 1.7 5.8E-05 44.0 4.7 34 19-53 4-37 (467)
469 3g3e_A D-amino-acid oxidase; F 78.8 1.6 5.6E-05 42.0 4.4 34 21-54 2-40 (351)
470 3h8l_A NADH oxidase; membrane 78.8 1.6 5.4E-05 43.2 4.4 33 20-53 2-37 (409)
471 1q1r_A Putidaredoxin reductase 78.8 1.8 6.2E-05 43.4 4.8 35 19-53 4-39 (431)
472 4g81_D Putative hexonate dehyd 78.8 1.8 6.1E-05 40.4 4.5 33 17-50 7-40 (255)
473 3lxd_A FAD-dependent pyridine 78.8 1.6 5.3E-05 43.5 4.3 36 19-54 9-45 (415)
474 4iin_A 3-ketoacyl-acyl carrier 78.7 2.9 0.0001 38.8 6.0 34 16-50 26-60 (271)
475 3svt_A Short-chain type dehydr 78.7 1.6 5.6E-05 40.8 4.3 35 16-51 8-43 (281)
476 3qj4_A Renalase; FAD/NAD(P)-bi 78.7 1.3 4.5E-05 42.6 3.7 32 20-52 2-36 (342)
477 3gvp_A Adenosylhomocysteinase 78.7 1.7 5.9E-05 43.7 4.6 36 16-52 217-252 (435)
478 3kvo_A Hydroxysteroid dehydrog 78.6 4.6 0.00016 39.3 7.6 37 16-53 42-79 (346)
479 2bgk_A Rhizome secoisolaricire 78.6 1.9 6.5E-05 39.9 4.7 34 16-50 13-47 (278)
480 3e1t_A Halogenase; flavoprotei 78.4 2.2 7.7E-05 43.7 5.6 35 19-54 7-41 (512)
481 1gq2_A Malic enzyme; oxidoredu 78.4 1.6 5.6E-05 44.9 4.3 40 15-54 278-327 (555)
482 1h5q_A NADP-dependent mannitol 78.4 2.9 9.9E-05 38.3 5.8 34 17-51 12-46 (265)
483 4fc7_A Peroxisomal 2,4-dienoyl 78.3 1.9 6.5E-05 40.3 4.6 36 15-51 23-59 (277)
484 3e18_A Oxidoreductase; dehydro 78.3 5.2 0.00018 39.0 7.9 34 18-51 4-38 (359)
485 3tfo_A Putative 3-oxoacyl-(acy 78.3 2.5 8.5E-05 39.4 5.4 33 17-50 2-35 (264)
486 4fgw_A Glycerol-3-phosphate de 78.2 3.8 0.00013 40.7 6.9 31 20-50 35-72 (391)
487 3o4f_A Spermidine synthase; am 78.2 3.3 0.00011 39.5 6.2 34 18-53 83-117 (294)
488 3pvc_A TRNA 5-methylaminomethy 78.2 1.7 5.9E-05 46.5 4.7 33 19-52 264-296 (689)
489 2r00_A Aspartate-semialdehyde 78.1 2.9 9.9E-05 40.7 5.9 29 20-48 4-33 (336)
490 1mv8_A GMD, GDP-mannose 6-dehy 78.1 1.8 6.1E-05 43.7 4.5 32 21-53 2-33 (436)
491 1xhc_A NADH oxidase /nitrite r 78.1 2.7 9.1E-05 41.2 5.8 34 18-52 142-175 (367)
492 2d1y_A Hypothetical protein TT 78.1 1.6 5.6E-05 40.2 4.0 34 16-50 3-37 (256)
493 1zh8_A Oxidoreductase; TM0312, 78.1 4.4 0.00015 39.1 7.3 95 14-140 13-110 (340)
494 3fr7_A Putative ketol-acid red 78.0 2.5 8.4E-05 43.3 5.4 31 11-41 45-76 (525)
495 3s2e_A Zinc-containing alcohol 77.8 2.4 8.3E-05 40.8 5.3 32 18-50 166-197 (340)
496 3mw9_A GDH 1, glutamate dehydr 77.8 3.8 0.00013 41.9 6.8 52 17-77 242-293 (501)
497 1rjw_A ADH-HT, alcohol dehydro 77.8 2.1 7.3E-05 41.3 4.9 31 19-50 165-195 (339)
498 4f3y_A DHPR, dihydrodipicolina 77.8 4 0.00014 38.4 6.6 101 17-147 5-107 (272)
499 2xve_A Flavin-containing monoo 77.8 2 6.9E-05 43.6 4.9 33 20-52 3-40 (464)
500 2qyt_A 2-dehydropantoate 2-red 77.8 1.6 5.4E-05 41.5 3.9 30 21-50 10-44 (317)
No 1
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=100.00 E-value=3e-90 Score=725.64 Aligned_cols=451 Identities=39% Similarity=0.724 Sum_probs=410.4
Q ss_pred CcccccccCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHH
Q 012768 2 SMSTLRIWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAF 81 (456)
Q Consensus 2 y~RQlrlwG~~~q~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~ 81 (456)
||||+|+||.++|++|++++|+|+|+||+|+++||||+++|||+|||+|+|.|+.+||+|||+++.+|+|++||++++++
T Consensus 15 Y~Rqi~l~G~~~q~~L~~~~VlvvG~GGlGseiak~La~aGVg~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~ 94 (531)
T 1tt5_A 15 YDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEF 94 (531)
T ss_dssp THHHHHHHHHHHHHHHHHCEEEEECCSHHHHHHHHHHHTTTCSEEEEECCCBBCHHHHHHCTTCCGGGBTSBHHHHHHHH
T ss_pred hhHHHHhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEechhhcccCccCChhhcCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCEEEEEecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEEEeeccceeeEEeeeCCceeE
Q 012768 82 LQELNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGLTGFVRISVKEHTVV 161 (456)
Q Consensus 82 l~~lnp~v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~~G~v~~~~~~~~~~ 161 (456)
|+++||+|+++++......+.+...+++++||+||+|.++...+..++++|+.+++|+|.+++.|++|++++++|+|+++
T Consensus 95 l~~lNp~v~v~~~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~ln~~c~~~~iplI~~~~~G~~G~v~~~~p~~~~~ 174 (531)
T 1tt5_A 95 LQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVI 174 (531)
T ss_dssp HHTTCTTSBCCEESSCHHHHHHSCGGGGGGCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEEEETTEEEEEEECSCEEES
T ss_pred HHHhCCCCeEEEeCCCcchhhhhhHHHhcCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEEEecCCeEEEEEEcCCceec
Confidence 99999999999887765554445678899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCcccCCCCchhhhhhhcccCCCCCCcccCCCcHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhhcc
Q 012768 162 ESKPDHFLDDLRLNNPWPELRKFAETFDLNVPDPVAHKHTPYVVILIKMSEEWTNSHGGSLPSTREEKREFKELLKSKMV 241 (456)
Q Consensus 162 ~~~~~~~~~dlrl~~p~p~l~~~~~~~d~~~~~~~~~~~~P~~v~l~~~~~~~~~~~~g~~p~~~~~~~~f~~~~~~~~~ 241 (456)
+++|+...+++|+.+|||++.+++.++|.+.++...++|+|++++++++++.||..|+|++|++++++.+|++++.++|+
T Consensus 175 d~~~~~~~~~lr~~~p~P~~~~~~~~~~~~~~~~~~~~~~p~vv~~~~ale~~k~~~~g~~P~~~~~~~~f~~~i~~~~~ 254 (531)
T 1tt5_A 175 ESHPDNALEDLRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEKEDFRDLIRQGIL 254 (531)
T ss_dssp CCCCSSCCCCCCSSSCCHHHHHHHHTCC-------CGGGSCHHHHHHHHHHHHTTTTCCCCCCHHHHHHHHHHHHHHTTS
T ss_pred cCCCCCCCCcccccCCCCCchhhhhccCcccccCCCcCCchHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHhhcc
Confidence 99998888999999999999999999999988889999999999999999999999999999999999999999999886
Q ss_pred C-CCCCCHHHHHHHHhhccCCCCccHHHHHHHh--------cCCCCchHHHHHhh-------------------------
Q 012768 242 A-IDEDNYKEAIEASFKVFAPPGIKLALSKVLQ--------SADSSFFPFSIAIG------------------------- 287 (456)
Q Consensus 242 ~-~~~~nf~EA~~~~~~~~~~~~i~~~~~~~~~--------~~~~~fw~l~~~l~------------------------- 287 (456)
. .+++||+||+++++++++|+++|.+++++|+ ..++.||++++||+
T Consensus 255 ~~~~e~N~~Ea~~~~~~~~~~~~i~~~v~~~~~~~~~~~~~~~s~~Fwil~~alk~F~~~~~~g~lPl~g~ipDm~s~t~ 334 (531)
T 1tt5_A 255 KPEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVRGTIPDMIADSG 334 (531)
T ss_dssp SCTTHHHHHHHHHHHHHHSCCCCCCHHHHHHHTSHHHHSCCSSCCHHHHHHHHHHHHHHTTTTTSCCCCCCCCCCSSCHH
T ss_pred cCccccchHHHHHHHHhhcCCccCcHHHHHHhcccccccccCCCchHHHHHHHHHHHHHhcCCCCCCCCCccCccccchh
Confidence 5 4678999999999999999999999999996 23578999999987
Q ss_pred ------hhH-HHHHhhHHHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHhcccceEeeccccccccCCCChhhHhhhhccc
Q 012768 288 ------RPW-IFAEADCLAIEQRVRNNLKKLGREPESISKATIKSFCRNARKLKVCRYRLLEDEFSNPSVPDIQKYLTDE 360 (456)
Q Consensus 288 ------~iY-~ka~~D~~~~~~~~~~~l~~~g~~~~~i~~~~i~~f~~n~~~~~~i~~~sl~~~~~~p~~~~~~~~~~d~ 360 (456)
++| +||.+|+++|..+++++++++|++++.++...++.||||.+.+++++++++++++..|..+. ....+|+
T Consensus 335 ~Y~~lq~iy~~ka~~D~~~v~~~v~~~~~~~~~~~~~i~~~~i~~f~kn~~~l~~i~~~~l~~~~~~~~~~~-~~~~~~~ 413 (531)
T 1tt5_A 335 KYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINK-DEIISSM 413 (531)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSSSCHHHHHHHHHTGGGCEEECCCCHHHHHSTTTSCH-HHHHHHT
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCCHHHHHHHHhchhhhhcccccchHhhhccccchh-hhhhhhh
Confidence 389 99999999999999999999999888999999999999999999999999999998775421 0122333
Q ss_pred -cchhHHHHHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHHHHHHHHHHhhcCCCCCCchHHHHHHHHHhCCCcchhHHH
Q 012768 361 -DYSVAMGFYILLRAVDRFAANYNNYPGEFDGPMDEDISRLKTTAVSVLNDLGCNGSTLTEDLINEMCRFGAAELHAVAA 439 (456)
Q Consensus 361 -~~~~~~~~~~~~~al~~F~~~~gr~P~~~~~~~~~D~~~l~~~~~~i~~~~~~~~~~i~e~~v~e~~r~~~~~l~~vaa 439 (456)
+.+++..||++|||+++|.++|||+|++++.+.++|+++|.+++.+++++.++. ..+++++++|+||+++++||||||
T Consensus 414 ~~~~~~~~~~~~~~al~~f~~~~gr~P~~~~~~~~~D~~~l~~~~~~~~~~~~~~-~~~~~~~~~e~~r~~~~el~pvaA 492 (531)
T 1tt5_A 414 DNPDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLS-VMVKDDYVHEFCRYGAAEPHTIAA 492 (531)
T ss_dssp TSTTSTHHHHHHHHHHHHHHHHHSSCTTCSTTTHHHHHHHHHHHHHHHHHHHTCC-CCCCHHHHHHHHHTTTCCCHHHHH
T ss_pred hccccchHHHHHHHHHHHHHHHhCCCCCccccchHHHHHHHHHHHHHHHHhcCCc-ccccHHHHHHHHHhcCCCcCHHHH
Confidence 345678999999999999999999999887667899999999999999988874 568899999999999999999999
Q ss_pred HHHHHHHHHHHHHhc
Q 012768 440 FIGGVASQEVIKVVF 454 (456)
Q Consensus 440 ~~GGiaaQEvIK~i~ 454 (456)
|+||+|||||||+||
T Consensus 493 ~~GGi~AQEviK~iT 507 (531)
T 1tt5_A 493 FLGGAAAQEVIKIIT 507 (531)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc
Confidence 999999999999987
No 2
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.3e-58 Score=507.66 Aligned_cols=353 Identities=23% Similarity=0.351 Sum_probs=280.7
Q ss_pred CcccccccCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHH
Q 012768 2 SMSTLRIWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAF 81 (456)
Q Consensus 2 y~RQlrlwG~~~q~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~ 81 (456)
||||+|+||.+||++|++++|+|+|+||+|+++||||+++|||+|||+|+|.|+.+||+|||+++.+|+|++||++++++
T Consensus 10 Y~Rqi~l~G~~~q~rL~~s~VlIvG~GGlGseiak~La~aGVg~itlvD~D~V~~sNL~RQ~l~~~~dvG~~Ka~a~~~~ 89 (1015)
T 3cmm_A 10 YSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGVKSMTVFDPEPVQLADLSTQFFLTEKDIGQKRGDVTRAK 89 (1015)
T ss_dssp HHHHHHHSCHHHHHHHTTCEEEEECCSHHHHHHHHHHHHHCCSEEEEECCSBCCGGGGGTCTTCCGGGTTSBHHHHHHHH
T ss_pred ccchHhhcCHHHHHHHhcCEEEEECCChHHHHHHHHHHHcCCCeEEEecCCEechhhhccccccChhhcChHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCEEEEEecChhhhhcCCcCCCCCCcEEEEcCC-ChHHHHHHHHHHHHcCCeEEEEeeccceeeEEeeeCC-ce
Q 012768 82 LQELNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQL-GEEKMIKLDRICREANVMLIFARSYGLTGFVRISVKE-HT 159 (456)
Q Consensus 82 l~~lnp~v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~-~~~~~~~l~~~~~~~~ip~i~~~~~G~~G~v~~~~~~-~~ 159 (456)
|+++||+|+++++... + +.+++++||+||+|.+ +...+..|+++|+++++|+|++++.|++|++|+++++ |.
T Consensus 90 L~~lNP~v~v~~~~~~---l---~~~~l~~~DvVv~~~d~~~~~r~~ln~~c~~~~iplI~~~~~G~~G~v~~d~~~~~~ 163 (1015)
T 3cmm_A 90 LAELNAYVPVNVLDSL---D---DVTQLSQFQVVVATDTVSLEDKVKINEFCHSSGIRFISSETRGLFGNTFVDLGDEFT 163 (1015)
T ss_dssp HTTSCTTSCEEECCCC---C---CSTTGGGCSEEEECTTSCHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEECCSCEE
T ss_pred HHHHCCCCeEEEecCC---C---CHHHHhcCCEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEEecccEEEEEecCCCceE
Confidence 9999999999986653 2 3467889999999999 9999999999999999999999999999999999987 56
Q ss_pred eEecCCCCCCCCcccCCCCchhhhhhhcccCCCCCCcccCCCcHHHHHHHHHHHHH-HhcCCCCCCCHHHHHHHHHHHHh
Q 012768 160 VVESKPDHFLDDLRLNNPWPELRKFAETFDLNVPDPVAHKHTPYVVILIKMSEEWT-NSHGGSLPSTREEKREFKELLKS 238 (456)
Q Consensus 160 ~~~~~~~~~~~dlrl~~p~p~l~~~~~~~d~~~~~~~~~~~~P~~v~l~~~~~~~~-~~~~g~~p~~~~~~~~f~~~~~~ 238 (456)
+++++++ .|++.+... +|. |++ +++++.|+ ..++| ++..|+++ +
T Consensus 164 c~~~~~~---------~p~~~~i~~---i~~-----------p~~---v~~l~~~~h~~~~g-------d~v~F~ev--~ 208 (1015)
T 3cmm_A 164 VLDPTGE---------EPRTGMVSD---IEP-----------DGT---VTMLDDNRHGLEDG-------NFVRFSEV--E 208 (1015)
T ss_dssp ESBSSCC---------CCCEEEEEE---ECT-----------TCE---EEESTTCCCCCCTT-------CEEEEECC--B
T ss_pred EeeCCCC---------CCccccccC---CCC-----------Cce---eEeeecccccCCCC-------CeEEEEee--c
Confidence 5565544 355544332 211 221 23333332 11223 23445554 4
Q ss_pred hccCCCCCCHHHHHHHHhhccCCCCccHHHHHHHhcCCCCchHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhhCCCCCCC
Q 012768 239 KMVAIDEDNYKEAIEASFKVFAPPGIKLALSKVLQSADSSFFPFSIAIGRPWIFAEADCLAIEQRVRNNLKKLGREPESI 318 (456)
Q Consensus 239 ~~~~~~~~nf~EA~~~~~~~~~~~~i~~~~~~~~~~~~~~fw~l~~~l~~iY~ka~~D~~~~~~~~~~~l~~~g~~~~~i 318 (456)
+|.+ +|+.|+. ..+++. ...||+ + +++.+
T Consensus 209 gm~e---lN~~e~~--~i~~~~---------------p~~f~I------------------------------~-Dts~~ 237 (1015)
T 3cmm_A 209 GLDK---LNDGTLF--KVEVLG---------------PFAFRI------------------------------G-SVKEY 237 (1015)
T ss_dssp TSGG---GGSSCCE--ECEEEE---------------TTEEEC------------------------------S-CCTTT
T ss_pred cchh---hcCccce--eeEEcC---------------CceeEe------------------------------c-ccchh
Confidence 5543 3433322 122222 234563 1 23445
Q ss_pred CHHHHHHHHHhcccceEeeccccccccCCCChhhHhhhhccc-cchhHHHHHHHHHHHHHHHHHc-CCCCCCCCCCchhh
Q 012768 319 SKATIKSFCRNARKLKVCRYRLLEDEFSNPSVPDIQKYLTDE-DYSVAMGFYILLRAVDRFAANY-NNYPGEFDGPMDED 396 (456)
Q Consensus 319 ~~~~i~~f~~n~~~~~~i~~~sl~~~~~~p~~~~~~~~~~d~-~~~~~~~~~~~~~al~~F~~~~-gr~P~~~~~~~~~D 396 (456)
+.|..++++++++.++.+.|+++++.+++|.. ..+|+ +.+++..+|++|||+++|.++| ||+|++++ ++|
T Consensus 238 ~~yv~~g~~~qvk~p~~i~f~~l~~~l~~p~~-----l~~d~~k~~~~~~l~~~~~Al~~F~~~~~gr~P~~~~---~~D 309 (1015)
T 3cmm_A 238 GEYKKGGIFTEVKVPRKISFKSLKQQLSNPEF-----VFSDFAKFDRAAQLHLGFQALHQFAVRHNGELPRTMN---DED 309 (1015)
T ss_dssp CCCCBCCEEEECCCCEEECCCCHHHHHHSCCB-----CCSCGGGTHHHHHHHHHHHHHHHHHHHTTTCCCCTTC---HHH
T ss_pred hhhhcCceeEEecCCcccCHHHHHHHHcChHH-----HHHHHhccCcchHHHHHHHHHHHHHHhcCCCCCCCCC---HHH
Confidence 55555566788899999999999999998842 22343 3567889999999999999999 99999754 689
Q ss_pred HHHHHHHHHHHHhhcCCC--C-CCchHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHhc
Q 012768 397 ISRLKTTAVSVLNDLGCN--G-STLTEDLINEMCRFGAAELHAVAAFIGGVASQEVIKVVF 454 (456)
Q Consensus 397 ~~~l~~~~~~i~~~~~~~--~-~~i~e~~v~e~~r~~~~~l~~vaa~~GGiaaQEvIK~i~ 454 (456)
++++.+++++++++.+.. . ..+++++++++||+++++|||||||+||+|||||||+||
T Consensus 310 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~el~pvaA~iGGivAQEVIKaiT 370 (1015)
T 3cmm_A 310 ANELIKLVTDLSVQQPEVLGEGVDVNEDLIKELSYQARGDIPGVVAFFGGLVAQEVLKACS 370 (1015)
T ss_dssp HHHHHHHHHHHHHHCHHHHCTTCCCCHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCccccccCcHHHHHHHHHhcCcccCcHHHHhcchHHHHHHHHhc
Confidence 999999999998875532 1 368899999999999999999999999999999999987
No 3
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=100.00 E-value=3.2e-54 Score=431.71 Aligned_cols=300 Identities=24% Similarity=0.379 Sum_probs=243.4
Q ss_pred CcccccccCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHH
Q 012768 2 SMSTLRIWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAF 81 (456)
Q Consensus 2 y~RQlrlwG~~~q~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~ 81 (456)
||||+|+||.++|++|++++|+|+|+||+|+++||||+++|||+|||+|+|.|+.+||+|||+++++|+|++||++++++
T Consensus 19 Y~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~ 98 (346)
T 1y8q_A 19 YDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLER 98 (346)
T ss_dssp HHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHH
T ss_pred HHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCEEEEEecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEEEeeccceeeEEeeeCCceeE
Q 012768 82 LQELNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGLTGFVRISVKEHTVV 161 (456)
Q Consensus 82 l~~lnp~v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~~G~v~~~~~~~~~~ 161 (456)
|+++||+|+++++.... .+...+++++||+||+|.++...+..++++|+++++|||.+++.|++|++|+++++|+++
T Consensus 99 l~~lnp~v~v~~~~~~~---~~~~~~~~~~~dvVv~~~d~~~~r~~ln~~~~~~~ip~i~~~~~G~~G~v~~d~~~~~~~ 175 (346)
T 1y8q_A 99 AQNLNPMVDVKVDTEDI---EKKPESFFTQFDAVCLTCCSRDVIVKVDQICHKNSIKFFTGDVFGYHGYTFANLGEHEFV 175 (346)
T ss_dssp HHHTCTTSEEEEECSCG---GGCCHHHHTTCSEEEEESCCHHHHHHHHHHHHHTTCEEEEEEEEBTEEEEEEECSEEEEE
T ss_pred HHhHCCCeEEEEEeccc---CcchHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEeecccEEEEEEecCCCCEE
Confidence 99999999999877643 233467789999999999999999999999999999999999999999999999999988
Q ss_pred ecCCCCCCCCcccCCCCchhhhhhhcccCCCCCCcccCCCcHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhhcc
Q 012768 162 ESKPDHFLDDLRLNNPWPELRKFAETFDLNVPDPVAHKHTPYVVILIKMSEEWTNSHGGSLPSTREEKREFKELLKSKMV 241 (456)
Q Consensus 162 ~~~~~~~~~dlrl~~p~p~l~~~~~~~d~~~~~~~~~~~~P~~v~l~~~~~~~~~~~~g~~p~~~~~~~~f~~~~~~~~~ 241 (456)
+.++++ +..|..+ + ...++
T Consensus 176 ~~~~~~-------------------------------~~~p~~~------~---~~~~~--------------------- 194 (346)
T 1y8q_A 176 EEKTKV-------------------------------AKVSQGV------E---DGPDT--------------------- 194 (346)
T ss_dssp EECC----------------------------------------------------------------------------
T ss_pred EcCCCC-------------------------------cCCCccc------c---cCCCC---------------------
Confidence 766442 0111100 0 00000
Q ss_pred CCCCCCHHHHHHHHhhccCCCCccHHHHHHHhcCCCCchHHHHHhhhhHHHHHhhHHHHHHHHHHHHHhhCCCCCCCCHH
Q 012768 242 AIDEDNYKEAIEASFKVFAPPGIKLALSKVLQSADSSFFPFSIAIGRPWIFAEADCLAIEQRVRNNLKKLGREPESISKA 321 (456)
Q Consensus 242 ~~~~~nf~EA~~~~~~~~~~~~i~~~~~~~~~~~~~~fw~l~~~l~~iY~ka~~D~~~~~~~~~~~l~~~g~~~~~i~~~ 321 (456)
.+.||+ ++
T Consensus 195 --~~~~~d-----------------------------------------------------------------~~----- 202 (346)
T 1y8q_A 195 --KRAKLD-----------------------------------------------------------------SS----- 202 (346)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --Cccccc-----------------------------------------------------------------CC-----
Confidence 001110 00
Q ss_pred HHHHHHHhcccceEeeccccccccCCCChh-hHhhhhccccchhHHHHHHHHHHHHHHHHHcCCCCCCCCCCchhhHHHH
Q 012768 322 TIKSFCRNARKLKVCRYRLLEDEFSNPSVP-DIQKYLTDEDYSVAMGFYILLRAVDRFAANYNNYPGEFDGPMDEDISRL 400 (456)
Q Consensus 322 ~i~~f~~n~~~~~~i~~~sl~~~~~~p~~~-~~~~~~~d~~~~~~~~~~~~~~al~~F~~~~gr~P~~~~~~~~~D~~~l 400 (456)
..++..+.+.|.||++.++.|... .+. .+.+++..+|++|||+++|.++|||+|++. ..++|+++|
T Consensus 203 ------~~~~~~~~~~f~~l~~~~~~~~~~~~~~-----~~~~r~~~~~~~~~al~~f~~~~~~~P~~~--~~~~d~~~l 269 (346)
T 1y8q_A 203 ------ETTMVKKKVVFCPVKEALEVDWSSEKAK-----AALKRTTSDYFLLQVLLKFRTDKGRDPSSD--TYEEDSELL 269 (346)
T ss_dssp ------CCCEEEEEEECCCHHHHTSCCSCSHHHH-----HHHTTSCTHHHHHHHHHHHHHHSSSCCCGG--GHHHHHHHH
T ss_pred ------ceEEEeceeeccCHHHHhcCCchhhhhh-----hhcccccHHHHHHHHHHHHHHHhCCCCCCC--CCHHHHHHH
Confidence 224667888899998888776431 110 012456689999999999999999999731 236899999
Q ss_pred HHHHHHHHhhcCCCCCCchHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHhc
Q 012768 401 KTTAVSVLNDLGCNGSTLTEDLINEMCRFGAAELHAVAAFIGGVASQEVIKVVF 454 (456)
Q Consensus 401 ~~~~~~i~~~~~~~~~~i~e~~v~e~~r~~~~~l~~vaa~~GGiaaQEvIK~i~ 454 (456)
.+++.++.++.+++...+++++++++ .++|||||||+||++||||||++|
T Consensus 270 ~~~a~~~~~~~~~~~~~~~~~~~~~~----~~~l~pv~AiiGGi~aQEviK~it 319 (346)
T 1y8q_A 270 LQIRNDVLDSLGISPDLLPEDFVRYC----FSEMAPVCAVVGGILAQEIVKALS 319 (346)
T ss_dssp HHHHHHHHHTTTCCGGGSCGGGGGSS----CSBCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCcccCCHHHHHHh----cCCccHHHHHHHHHHHHHHHHHhc
Confidence 99999999888765545778877755 889999999999999999999997
No 4
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=100.00 E-value=1.3e-32 Score=281.73 Aligned_cols=145 Identities=23% Similarity=0.323 Sum_probs=131.7
Q ss_pred CHHHHH-HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCC
Q 012768 10 GEQGQA-ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDA 88 (456)
Q Consensus 10 G~~~q~-~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~ 88 (456)
|.+.++ +|++++|+|+|+||+|++++++|+++|||+|+|+|+|.|+.+||+|||+++.+|+|++||++++++|+++||+
T Consensus 30 g~e~~~~~L~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~ 109 (434)
T 1tt5_B 30 STESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPN 109 (434)
T ss_dssp CSSHHHHHHHTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTT
T ss_pred CHHHHHHHhcCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCC
Confidence 444465 5599999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHc------------CCeEEEEeeccceeeEEeeeC
Q 012768 89 VKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREA------------NVMLIFARSYGLTGFVRISVK 156 (456)
Q Consensus 89 v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~------------~ip~i~~~~~G~~G~v~~~~~ 156 (456)
++++.+.... .+.+.+++++||+||+|.++.+.+..+|+.|... ++|+|++++.|+.|++++..|
T Consensus 110 v~v~~~~~~i---~~~~~~~~~~~DlVi~~~Dn~~~R~~in~~c~~~~~~~~g~~~~~~~iPli~~~~~g~~G~v~v~~p 186 (434)
T 1tt5_B 110 CNVVPHFNKI---QDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILP 186 (434)
T ss_dssp CCCEEEESCG---GGBCHHHHTTCSEEEECCSCHHHHHHHHHHHHHTCCBSSSCBCGGGCCCEEEEEEETTEEEEEEECT
T ss_pred CEEEEEeccc---chhhHHHhcCCCEEEECCCCHHHHHHHHHHHHHhhhccccccccccCCcEEEeccccceeEEEEECC
Confidence 9988876543 3334577899999999999999999999999874 999999999999999999876
Q ss_pred C
Q 012768 157 E 157 (456)
Q Consensus 157 ~ 157 (456)
+
T Consensus 187 ~ 187 (434)
T 1tt5_B 187 G 187 (434)
T ss_dssp T
T ss_pred C
Confidence 5
No 5
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=100.00 E-value=2.6e-33 Score=272.20 Aligned_cols=200 Identities=18% Similarity=0.194 Sum_probs=133.0
Q ss_pred Ccccccc--cCH-HHHHHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHH
Q 012768 2 SMSTLRI--WGE-QGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSV 78 (456)
Q Consensus 2 y~RQlrl--wG~-~~q~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~ 78 (456)
|||||.| ||. ++|++|++++|+|+|+||+|++++++|+++|||+|+|+|+|.|+.+||+||| ++.+|+|++||+++
T Consensus 16 y~r~i~L~~~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~-~~~~diG~~Ka~aa 94 (292)
T 3h8v_A 16 PRGSMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLF-FQPHQAGLSKVQAA 94 (292)
T ss_dssp ----------------CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC-------------CCTTSBHHHHH
T ss_pred chHhhcccccChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhccccc-CChhhcCchHHHHH
Confidence 9999988 998 9999999999999999999999999999999999999999999999999996 58899999999999
Q ss_pred HHHHHHhCCCCEEEEEecChhhhhcCC-cCCC-----------CCCcEEEEcCCChHHHHHHHHHHHHcCCeEEEEeecc
Q 012768 79 CAFLQELNDAVKAKFIEEYPEALIEMN-PPFF-----------SQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYG 146 (456)
Q Consensus 79 ~~~l~~lnp~v~v~~~~~~~~~~~~~~-~~~~-----------~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G 146 (456)
+++|+++||+++++++....... ++ .+++ +++|+||+|.|+...+..+|+.|+++++|||++++.|
T Consensus 95 ~~~L~~iNP~v~v~~~~~~l~~~--~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~~Pli~~gv~~ 172 (292)
T 3h8v_A 95 EHTLRNINPDVLFEVHNYNITTV--ENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGVSE 172 (292)
T ss_dssp HHHHHHHCTTSEEEEECCCTTSH--HHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEECT
T ss_pred HHHHHhhCCCcEEEEecccCCcH--HHHHHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhCCCEEEeeeec
Confidence 99999999999999876543210 01 1121 6899999999999999999999999999999999975
Q ss_pred --ceeeEEeeeCCceeEecCCCCCCCCcccCCCCchhhhhh---hcccCCCCCCcccCCCcHHHHHHHHHHHHHH
Q 012768 147 --LTGFVRISVKEHTVVESKPDHFLDDLRLNNPWPELRKFA---ETFDLNVPDPVAHKHTPYVVILIKMSEEWTN 216 (456)
Q Consensus 147 --~~G~v~~~~~~~~~~~~~~~~~~~dlrl~~p~p~l~~~~---~~~d~~~~~~~~~~~~P~~v~l~~~~~~~~~ 216 (456)
+.|++.+..|+. ..|+.|-||.+..-. ..++..+.-....+.++.++..++++|.+|-
T Consensus 173 ~~~~Gqv~~~~pg~------------t~Cy~Cl~p~~~~~~~~~~~~~~~gvc~~~l~~~~g~vgslqA~EalK~ 235 (292)
T 3h8v_A 173 NAVSGHIQLIIPGE------------SACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVAGILVQNVLKF 235 (292)
T ss_dssp TSSEEEEEEECTTT------------SCCTTSSSCCCCCCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEEEEECCCC------------CCCHhhcCCccccccccccchhhcCcccCCcchHHHHHHHHHHHHHHHH
Confidence 899999887651 125666666432100 0111000000013344556666777776664
No 6
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=99.98 E-value=2.1e-32 Score=262.29 Aligned_cols=154 Identities=16% Similarity=0.241 Sum_probs=140.8
Q ss_pred Ccccccc--cCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHH
Q 012768 2 SMSTLRI--WGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVC 79 (456)
Q Consensus 2 y~RQlrl--wG~~~q~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~ 79 (456)
|+||+++ ||.++|++|++++|+|+|+||+|++++++|+++||++|+|+|+|.|+.+||+||++++.+|+|++||++++
T Consensus 9 y~Rq~~l~~~g~~~q~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~ 88 (251)
T 1zud_1 9 YSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQ 88 (251)
T ss_dssp THHHHTSTTTHHHHHHHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHH
T ss_pred hhhhcchhhcCHHHHHHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHH
Confidence 9999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCEEEEEecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEEEeeccceeeEEeeeCC
Q 012768 80 AFLQELNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGLTGFVRISVKE 157 (456)
Q Consensus 80 ~~l~~lnp~v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~~G~v~~~~~~ 157 (456)
++|+++||+++++.+...... ++..++++++|+||+|.++...+..+++.|++.++|+|.+++.|+.|++++..++
T Consensus 89 ~~l~~~np~~~v~~~~~~~~~--~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p~i~~~~~g~~G~v~~~~p~ 164 (251)
T 1zud_1 89 QRLTQLNPDIQLTALQQRLTG--EALKDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGGQLMVLTPP 164 (251)
T ss_dssp HHHHHHCTTSEEEEECSCCCH--HHHHHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCCEEEEEEEBTEEEEEEECTT
T ss_pred HHHHHHCCCCEEEEEeccCCH--HHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCCEEEEeccccceEEEEEccC
Confidence 999999999999887643211 0113456789999999999999999999999999999999999999999986553
No 7
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=99.97 E-value=1.3e-30 Score=288.80 Aligned_cols=149 Identities=23% Similarity=0.284 Sum_probs=138.1
Q ss_pred ccccCHHHHHHH-hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHH
Q 012768 6 LRIWGEQGQAAL-EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQE 84 (456)
Q Consensus 6 lrlwG~~~q~~L-~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~ 84 (456)
-..+|.++|+++ ++++|+|||+||+||+++++|+++|||+|+|+|+|.|+.+||+|||+++.+|||++||++++++|++
T Consensus 397 ~~~~g~~~~~~~l~~~~vlvvG~GglG~~~~~~L~~~Gvg~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka~~~~~~l~~ 476 (805)
T 2nvu_B 397 DFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLND 476 (805)
T ss_dssp TCCCCSHHHHHHHHTCCEEEECCSSHHHHHHHHHHTTTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCcEEEECCCeecccccccccccchhhcCChHHHHHHHHHHH
Confidence 356899999988 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCEEEEEecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHH------------cCCeEEEEeeccceeeEE
Q 012768 85 LNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICRE------------ANVMLIFARSYGLTGFVR 152 (456)
Q Consensus 85 lnp~v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~------------~~ip~i~~~~~G~~G~v~ 152 (456)
+||+++++.+.... .+.+.+++++||+||+|.++...+..||+.|+. +++|+|++++.|+.|+++
T Consensus 477 ~np~~~v~~~~~~~---~~~~~~~~~~~d~vv~~~d~~~~r~~in~~~~~~~~~~~g~~~~~~~~p~i~~~~~g~~G~~~ 553 (805)
T 2nvu_B 477 RVPNCNVVPHFNKI---QDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNAR 553 (805)
T ss_dssp HSTTCEEEEEESCG---GGSCHHHHHTCSEEEECCSCHHHHHHHHHHHHHTCCEETTEECGGGCCCEEEEEEETTEEEEE
T ss_pred HCCCCEEEEEeccc---cccHHHHHhcCCEEEECCCCHHHHHHHHHHHHHHhhccccccccccCCcEEEeccccCceeEE
Confidence 99999998876543 334567788999999999999999999999987 499999999999999999
Q ss_pred eeeCC
Q 012768 153 ISVKE 157 (456)
Q Consensus 153 ~~~~~ 157 (456)
++.++
T Consensus 554 ~~~p~ 558 (805)
T 2nvu_B 554 VILPG 558 (805)
T ss_dssp EECTT
T ss_pred EECCC
Confidence 99876
No 8
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=99.97 E-value=3.5e-31 Score=280.17 Aligned_cols=150 Identities=27% Similarity=0.356 Sum_probs=138.3
Q ss_pred cccccCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHH
Q 012768 5 TLRIWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQE 84 (456)
Q Consensus 5 QlrlwG~~~q~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~ 84 (456)
|+|+||.++|++|++++|+|||+||+||++|+||+++|||+|+|+|+|.|+.+||+|||+++.+|||++||++++++|++
T Consensus 3 qi~l~G~e~Q~kL~~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~ 82 (640)
T 1y8q_B 3 LSRGLPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQ 82 (640)
T ss_dssp ---CCCHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHT
T ss_pred hhhhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCEEEEEecChhhhhcC--CcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEEEeeccceeeEEeeeCC
Q 012768 85 LNDAVKAKFIEEYPEALIEM--NPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGLTGFVRISVKE 157 (456)
Q Consensus 85 lnp~v~v~~~~~~~~~~~~~--~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~~G~v~~~~~~ 157 (456)
+||+++++++.... .+. ..+++++||+||+|.++...+..++++|+.+++|+|.+++.|+.|++++..++
T Consensus 83 iNP~v~V~a~~~~i---~~~~~~~~~~~~~DlVvda~Dn~~aR~~ln~~c~~~~iPlI~~g~~G~~G~v~vi~p~ 154 (640)
T 1y8q_B 83 FYPKANIVAYHDSI---MNPDYNVEFFRQFILVMNALDNRAARNHVNRMCLAADVPLIESGTAGYLGQVTTIKKG 154 (640)
T ss_dssp TCTTCEEEEEESCT---TSTTSCHHHHTTCSEEEECCSCHHHHHHHHHHHHHHTCCEEEEEEETTEEEEEEECTT
T ss_pred HCCCCeEEEEeccc---chhhhhHhhhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEEEecccceEEEECCC
Confidence 99999999877543 222 24678999999999999999999999999999999999999999999999876
No 9
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=99.97 E-value=1.2e-31 Score=256.68 Aligned_cols=154 Identities=18% Similarity=0.277 Sum_probs=140.5
Q ss_pred Ccccccc--cCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHH
Q 012768 2 SMSTLRI--WGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVC 79 (456)
Q Consensus 2 y~RQlrl--wG~~~q~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~ 79 (456)
|+||+++ ||.++|++|++++|+|+|+||+|++++++|+++|+++|+|+|.|.|+.+||+||++++.+|+|++|+++++
T Consensus 12 y~Rq~~l~~~g~~~q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~ 91 (249)
T 1jw9_B 12 YNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESAR 91 (249)
T ss_dssp THHHHTSTTTHHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHH
T ss_pred hhheecccccCHHHHHHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHH
Confidence 9999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCEEEEEecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEEEeeccceeeEEeeeCC
Q 012768 80 AFLQELNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGLTGFVRISVKE 157 (456)
Q Consensus 80 ~~l~~lnp~v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~~G~v~~~~~~ 157 (456)
+++.++||.++++.+......- ...+++.++|+||++.++...+..+++.|++.++|+|.+++.|+.|++++..++
T Consensus 92 ~~l~~~np~~~v~~~~~~~~~~--~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p~i~~~~~g~~g~v~~~~p~ 167 (249)
T 1jw9_B 92 DALTRINPHIAITPVNALLDDA--ELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQITVFTYQ 167 (249)
T ss_dssp HHHHHHCTTSEEEEECSCCCHH--HHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEEBTEEEEEEECCC
T ss_pred HHHHHHCCCcEEEEEeccCCHh--HHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEeeeccceEEEEEEeCC
Confidence 9999999999988866432210 113456789999999999999999999999999999999999999999887543
No 10
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.5e-31 Score=290.95 Aligned_cols=156 Identities=22% Similarity=0.326 Sum_probs=143.6
Q ss_pred CcccccccCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHcCC-----CcEEEEeCCcccccCCCccccccccccCcchHH
Q 012768 2 SMSTLRIWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGI-----GSITVIDGSKVEVGDLGNNFMLDESCVGESKAK 76 (456)
Q Consensus 2 y~RQlrlwG~~~q~~L~~~~VlIiG~gglG~eiaknLvl~Gv-----~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~ 76 (456)
|+||+++||.++|++|++++|+|||+||+||++++||+++|| |+|+|+|.|.|+.+||+|||+++.+|||++||+
T Consensus 408 y~rq~~l~G~~~q~kL~~~~VlvVGaGGlGsevlk~La~~Gv~~g~~G~i~lvD~D~Ve~SNLnRQ~lf~~~dvG~~Ka~ 487 (1015)
T 3cmm_A 408 YDNQIAVFGLDFQKKIANSKVFLVGSGAIGCEMLKNWALLGLGSGSDGYIVVTDNDSIEKSNLNRQFLFRPKDVGKNKSE 487 (1015)
T ss_dssp THHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTTTCSTTCEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHH
T ss_pred hhhHHHhcCHHHHHHHhcCeEEEEecCHHHHHHHHHHHHcCcCcCCCCeEEEEeCCEeccccccccccCChhhCCCHHHH
Confidence 899999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCC--EEEEEecChhhhhc--CCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEEEeeccceeeEE
Q 012768 77 SVCAFLQELNDAV--KAKFIEEYPEALIE--MNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGLTGFVR 152 (456)
Q Consensus 77 ~~~~~l~~lnp~v--~v~~~~~~~~~~~~--~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~~G~v~ 152 (456)
+++++++++||++ +++++......-.. .+.++++++|+||++.|+..++..+++.|+.+++|+|.+++.|+.|++.
T Consensus 488 ~aa~~l~~iNP~v~~~v~~~~~~i~~~~~~~~~~~~~~~~D~Vi~a~Dn~~aR~~ln~~c~~~~~Pli~~g~~G~~G~v~ 567 (1015)
T 3cmm_A 488 VAAEAVCAMNPDLKGKINAKIDKVGPETEEIFNDSFWESLDFVTNALDNVDARTYVDRRCVFYRKPLLESGTLGTKGNTQ 567 (1015)
T ss_dssp HHHHHHHHHCGGGTTTEEEECCCCSGGGTTTSCHHHHHHCSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEETTEEEEE
T ss_pred HHHHHHHHHCCCCcceEEEEecccCchhhhhccHhhhccCCEEEECCCCHHHHHHHHHHHHHcCCcEEEeCCCccccceE
Confidence 9999999999999 99987654322111 1235677899999999999999999999999999999999999999999
Q ss_pred eeeCC
Q 012768 153 ISVKE 157 (456)
Q Consensus 153 ~~~~~ 157 (456)
+..++
T Consensus 568 v~~p~ 572 (1015)
T 3cmm_A 568 VIIPR 572 (1015)
T ss_dssp EECTT
T ss_pred EEeCC
Confidence 88876
No 11
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=99.96 E-value=2e-29 Score=252.81 Aligned_cols=152 Identities=20% Similarity=0.219 Sum_probs=135.4
Q ss_pred CCccccc---ccCH--HH-HHHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcch
Q 012768 1 MSMSTLR---IWGE--QG-QAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESK 74 (456)
Q Consensus 1 ~y~RQlr---lwG~--~~-q~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~K 74 (456)
-||||+. +||. ++ |++|++++|+|+|+||+|++++++|+++|||+|+|+|+|.|+.+||+||++++.+|+|++|
T Consensus 94 rY~Rq~~~~~~~g~~~~~~q~~L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~K 173 (353)
T 3h5n_A 94 RYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNK 173 (353)
T ss_dssp TTHHHHHHHHHTTCCHHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBH
T ss_pred HhhhhhhhhhccCCChHHHHHHHhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChH
Confidence 3999975 5874 56 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCEEEEEecChhhhhcCCcCCCCCCcEEEEcCCChH-HHHHHHHHHHHcCCeEEEEeeccceeeEEe
Q 012768 75 AKSVCAFLQELNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEE-KMIKLDRICREANVMLIFARSYGLTGFVRI 153 (456)
Q Consensus 75 a~~~~~~l~~lnp~v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~-~~~~l~~~~~~~~ip~i~~~~~G~~G~v~~ 153 (456)
|++++++|+++||+++++.+......... ..+ ++++|+||+|.++.. .+..+|++|+++++|+|.+++.|..|++..
T Consensus 174 a~~~~~~l~~~np~v~v~~~~~~i~~~~~-~~~-~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i~~~~~g~~g~~g~ 251 (353)
T 3h5n_A 174 TEVIKRELLKRNSEISVSEIALNINDYTD-LHK-VPEADIWVVSADHPFNLINWVNKYCVRANQPYINAGYVNDIAVFGP 251 (353)
T ss_dssp HHHHHHHHHHHCTTSEEEEEECCCCSGGG-GGG-SCCCSEEEECCCCSTTHHHHHHHHHHHTTCCEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHCCCCeEEEeecccCchhh-hhH-hccCCEEEEecCChHHHHHHHHHHHHHhCCCEEEEEEeCCEEEEEE
Confidence 99999999999999999987764322110 123 889999999988888 899999999999999999999999998754
Q ss_pred e
Q 012768 154 S 154 (456)
Q Consensus 154 ~ 154 (456)
.
T Consensus 252 ~ 252 (353)
T 3h5n_A 252 L 252 (353)
T ss_dssp E
T ss_pred E
Confidence 3
No 12
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=99.96 E-value=3e-29 Score=247.33 Aligned_cols=203 Identities=14% Similarity=0.083 Sum_probs=155.4
Q ss_pred cccccCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHH
Q 012768 5 TLRIWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQE 84 (456)
Q Consensus 5 QlrlwG~~~q~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~ 84 (456)
..|+|+..++++|++++|+|+|+||+||++|++|+++|||+|+|+|+|.|+.+|++|||+++.+|+|++||++++++|++
T Consensus 20 ~wRll~~~g~~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~ 99 (340)
T 3rui_A 20 KWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKR 99 (340)
T ss_dssp HHHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHH
T ss_pred HHhhcchhhHHHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHH
Confidence 35889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCEEEEEecCh------------hhhhcC-CcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEEEeeccceeeE
Q 012768 85 LNDAVKAKFIEEYP------------EALIEM-NPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGLTGFV 151 (456)
Q Consensus 85 lnp~v~v~~~~~~~------------~~~~~~-~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~~G~v 151 (456)
+||+++++.+.... ..+... ..++++++|+||.|.++.+.+..+|++|+.+++|+|.++ .|+.|++
T Consensus 100 inP~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~tR~lin~~c~~~~~plI~aa-~G~~G~l 178 (340)
T 3rui_A 100 IFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAA-LGFDSYL 178 (340)
T ss_dssp HCTTCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTGGGHHHHHHHHHTTCEEEEEE-ECSSEEE
T ss_pred hCCCCEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHHHHHHHHHHHHHcCCcEEEee-ecceEEE
Confidence 99999999876421 011111 145678999999999999999999999999999999975 9999999
Q ss_pred EeeeCCceeEecCCCCCCCCcccCCCCchhhhhhhcc-cC--CCCCCcccCCCcHHHHHHHHHHHHHH
Q 012768 152 RISVKEHTVVESKPDHFLDDLRLNNPWPELRKFAETF-DL--NVPDPVAHKHTPYVVILIKMSEEWTN 216 (456)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~dlrl~~p~p~l~~~~~~~-d~--~~~~~~~~~~~P~~v~l~~~~~~~~~ 216 (456)
.+..+..+ ...|. ..-|+.|-+|.... ++. +. +.. -...+.++.++..+++++.+|.
T Consensus 179 ~v~~g~~~--~~~~~---~~~Cy~C~~~~~p~--~~~~~~t~~~~-c~v~~p~vg~igs~qA~E~lk~ 238 (340)
T 3rui_A 179 VMRHGNRD--EQSSK---QLGCYFCHDVVAPT--DSLTDRTLDQM-STVTRPGVAMMASSLAVELMTS 238 (340)
T ss_dssp EEECCCCC--SSCCC---CBCCGGGGSSSCCC--CCTTTCCCGGG-GGCSCHHHHHHHHHHHHHHHHH
T ss_pred EEeecccc--cCCCC---CCCeeeeCCCCCCc--ccccccccCCC-cceecchHHHHHHHHHHHHHHH
Confidence 88653211 11111 12244554332211 110 00 000 1145566677777888877665
No 13
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=99.95 E-value=1.7e-28 Score=256.77 Aligned_cols=208 Identities=13% Similarity=0.047 Sum_probs=155.1
Q ss_pred Ccccccc-------cCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcch
Q 012768 2 SMSTLRI-------WGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESK 74 (456)
Q Consensus 2 y~RQlrl-------wG~~~q~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~K 74 (456)
|+||++| ||..||++|++++|+|+|+||+|+++|++|+++|||+|+|+|+|.|+.+||+||++++.+|+|++|
T Consensus 303 ~~~~lnL~lmrwrll~~~gq~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~K 382 (598)
T 3vh1_A 303 QSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPK 382 (598)
T ss_dssp HHHHHHHHHHHHHHCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBH
T ss_pred HHHhhhhhhhhhhccchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHH
Confidence 5677775 677889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCEEEEEecCh------------hhhhcCC-cCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEE
Q 012768 75 AKSVCAFLQELNDAVKAKFIEEYP------------EALIEMN-PPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIF 141 (456)
Q Consensus 75 a~~~~~~l~~lnp~v~v~~~~~~~------------~~~~~~~-~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~ 141 (456)
|++++++|+++||+++++.+.... ..+...+ .++++++|+||+|.++.+.|..++++|+.+++|+|.
T Consensus 383 Aeaaa~~L~~iNP~v~v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatDn~~tR~lin~~c~~~~~plI~ 462 (598)
T 3vh1_A 383 AELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVIN 462 (598)
T ss_dssp HHHHHHHHHHHCTTCEEEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCSBGGGTHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHhHCCCcEEEEEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHhcCCCEEE
Confidence 999999999999999999876431 0111112 356778999999999999999999999999999998
Q ss_pred EeeccceeeEEeeeCCceeEecCCCCCCCCcccCCCCchhhhhhhcccCCC-CCCcccCCCcHHHHHHHHHHHHHH
Q 012768 142 ARSYGLTGFVRISVKEHTVVESKPDHFLDDLRLNNPWPELRKFAETFDLNV-PDPVAHKHTPYVVILIKMSEEWTN 216 (456)
Q Consensus 142 ~~~~G~~G~v~~~~~~~~~~~~~~~~~~~dlrl~~p~p~l~~~~~~~d~~~-~~~~~~~~~P~~v~l~~~~~~~~~ 216 (456)
+ +.|+.|++.+..+..+. .+... ..|+.|-+|....-. .-|... ..-...+.++.++..+++++.++.
T Consensus 463 a-a~G~~Gqv~v~~g~~p~---~~~~~--~~Cy~Cl~~~~p~~~-~~~~tld~~C~Vl~p~vgvigslqA~Ealk~ 531 (598)
T 3vh1_A 463 A-ALGFDSYLVMRHGNRDE---QSSKQ--LGCYFCHDVVAPTDS-LTDRTLDQMCTVTRPGVAMMASSLAVELMTS 531 (598)
T ss_dssp E-EECSSEEEEEEEC-----------C--BCCTTTSCSSCSSSC-TTTTTTTBSCCCSCTHHHHHHHHHHHHHHHH
T ss_pred E-EECCccEEEEEccCCCc---cCCCC--CCceeecCccCCCcc-ccccccCCCCCccCcHHHHHHHHHHHHHHHH
Confidence 6 78999999876432110 00111 124444433221110 001000 000134566677777788777665
No 14
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=99.95 E-value=2.6e-28 Score=255.38 Aligned_cols=201 Identities=14% Similarity=0.084 Sum_probs=154.0
Q ss_pred cccCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhC
Q 012768 7 RIWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELN 86 (456)
Q Consensus 7 rlwG~~~q~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~ln 86 (456)
|+|+..|+++|++++|+|||+||+||++|++|+++|||+|+|+|+|.|+.+||+||++++.+|+|++||++++++|+++|
T Consensus 314 Rllp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iN 393 (615)
T 4gsl_A 314 RILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF 393 (615)
T ss_dssp HTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred hhcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEecCh------------hhhhcC-CcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEEEeeccceeeEEe
Q 012768 87 DAVKAKFIEEYP------------EALIEM-NPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGLTGFVRI 153 (456)
Q Consensus 87 p~v~v~~~~~~~------------~~~~~~-~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~~G~v~~ 153 (456)
|+|+++.+.... ..+... ..++++++|+||+|.++.+.+..++++|+.+++|+|.++ .|+.|++.+
T Consensus 394 P~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~~tR~~ln~~c~~~~~PlI~aa-lG~~Gql~v 472 (615)
T 4gsl_A 394 PLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAA-LGFDSYLVM 472 (615)
T ss_dssp TTCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSGGGTHHHHHHHHHTTCEEEEEE-ECSSEEEEE
T ss_pred CCcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCHHHHHHHHHHHHHcCCeEEEEE-ccceeEEEE
Confidence 999999876421 111111 135678899999999999999999999999999999975 999999988
Q ss_pred eeCCceeEecCCCCCCCCcccCCCCchhhhhhhcc-c--CCCCCCcccCCCcHHHHHHHHHHHHHH
Q 012768 154 SVKEHTVVESKPDHFLDDLRLNNPWPELRKFAETF-D--LNVPDPVAHKHTPYVVILIKMSEEWTN 216 (456)
Q Consensus 154 ~~~~~~~~~~~~~~~~~dlrl~~p~p~l~~~~~~~-d--~~~~~~~~~~~~P~~v~l~~~~~~~~~ 216 (456)
..+.. ....+. ..-|+.|-+|.... ++. | .+..- ...+.++.++..+++++.++.
T Consensus 473 ~~g~~--~~~~~~---~~~CY~Cl~~~~P~--~~~~~rtl~~~C-~Vl~P~vgiigs~qA~EaLk~ 530 (615)
T 4gsl_A 473 RHGNR--DEQSSK---QLGCYFCHDVVAPT--DSLTDRTLDQMC-TVTRPGVAMMASSLAVELMTS 530 (615)
T ss_dssp ECCC--------C---CCCCTTTSCSSCTT--SCTTTTTTTCTT-CCCCHHHHHHHHHHHHHHHHH
T ss_pred eeccc--ccCCCC---CCCceeeCCCCCCc--ccccccccccCc-ceecchHHHHHHHHHHHHHHH
Confidence 65321 111111 12245554332211 110 1 01111 145666677777888777664
No 15
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.54 E-value=0.00022 Score=66.11 Aligned_cols=96 Identities=13% Similarity=0.180 Sum_probs=65.7
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEe
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIE 95 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~ 95 (456)
.|++.+|+|||.|.+|...++.|..+|. .+++++++.-. . + +.+.+ ...++ .+.
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~------------------~---l-~~l~~-~~~i~--~i~ 81 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSA------------------E---I-NEWEA-KGQLR--VKR 81 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCH------------------H---H-HHHHH-TTSCE--EEC
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCH------------------H---H-HHHHH-cCCcE--EEE
Confidence 5789999999999999999999999997 69999864210 0 1 12222 12343 222
Q ss_pred cChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEEEee
Q 012768 96 EYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARS 144 (456)
Q Consensus 96 ~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~ 144 (456)
.. + .++.+.++|+||+++++...-..+...|+ .++|+-.++.
T Consensus 82 ~~---~---~~~dL~~adLVIaAT~d~~~N~~I~~~ak-~gi~VNvvD~ 123 (223)
T 3dfz_A 82 KK---V---GEEDLLNVFFIVVATNDQAVNKFVKQHIK-NDQLVNMASS 123 (223)
T ss_dssp SC---C---CGGGSSSCSEEEECCCCTHHHHHHHHHSC-TTCEEEC---
T ss_pred CC---C---CHhHhCCCCEEEECCCCHHHHHHHHHHHh-CCCEEEEeCC
Confidence 21 1 23456789999988877777788888898 8998655543
No 16
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.40 E-value=0.00045 Score=59.90 Aligned_cols=103 Identities=18% Similarity=0.135 Sum_probs=61.2
Q ss_pred HHHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEE
Q 012768 14 QAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKF 93 (456)
Q Consensus 14 q~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~ 93 (456)
-+++.+.+|+|+|+|.+|..+++.|...|. .++++|.+.-....+... ..+.+..
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~------------------------~g~~~~~ 68 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSE------------------------FSGFTVV 68 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTT------------------------CCSEEEE
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhc------------------------CCCcEEE
Confidence 356778899999999999999999999997 799998654222211100 0111110
Q ss_pred Eec-ChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHH-cCCeEEEEee
Q 012768 94 IEE-YPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICRE-ANVMLIFARS 144 (456)
Q Consensus 94 ~~~-~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~-~~ip~i~~~~ 144 (456)
.+. .+..+.. ..+.++|+||.+..+......+...++. .+...+.+.+
T Consensus 69 ~d~~~~~~l~~---~~~~~ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 69 GDAAEFETLKE---CGMEKADMVFAFTNDDSTNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp SCTTSHHHHHT---TTGGGCSEEEECSSCHHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred ecCCCHHHHHH---cCcccCCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEEEE
Confidence 000 1111110 1145789999988776666666677776 5555454443
No 17
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.27 E-value=0.00099 Score=56.50 Aligned_cols=97 Identities=14% Similarity=0.164 Sum_probs=60.2
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEec
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 96 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~ 96 (456)
+...+|+|+|+|.+|..+++.|...|. .++++|.+. .++ +.+.+. .+.+...+.
T Consensus 4 ~~~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~-------------------~~~----~~~~~~--~~~~~~gd~ 57 (141)
T 3llv_A 4 NGRYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSK-------------------EKI----ELLEDE--GFDAVIADP 57 (141)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCH-------------------HHH----HHHHHT--TCEEEECCT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCH-------------------HHH----HHHHHC--CCcEEECCC
Confidence 345789999999999999999999997 688998532 122 222222 233222111
Q ss_pred -ChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEEE
Q 012768 97 -YPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFA 142 (456)
Q Consensus 97 -~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~ 142 (456)
+++.+.. ..+.++|+||.+..+......+...+++.+.+.|.+
T Consensus 58 ~~~~~l~~---~~~~~~d~vi~~~~~~~~n~~~~~~a~~~~~~~iia 101 (141)
T 3llv_A 58 TDESFYRS---LDLEGVSAVLITGSDDEFNLKILKALRSVSDVYAIV 101 (141)
T ss_dssp TCHHHHHH---SCCTTCSEEEECCSCHHHHHHHHHHHHHHCCCCEEE
T ss_pred CCHHHHHh---CCcccCCEEEEecCCHHHHHHHHHHHHHhCCceEEE
Confidence 1111111 124579999988877666666777777776554544
No 18
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.25 E-value=0.0012 Score=55.51 Aligned_cols=37 Identities=16% Similarity=0.286 Sum_probs=29.9
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 15 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 15 ~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.++...+|+|+|+|.+|..+++.|...|. +++++|.+
T Consensus 2 ~~~~~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~ 38 (144)
T 2hmt_A 2 GRIKNKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDIN 38 (144)
T ss_dssp ----CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESC
T ss_pred CCCcCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 34667889999999999999999999996 58888854
No 19
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.19 E-value=0.00055 Score=65.85 Aligned_cols=79 Identities=16% Similarity=0.181 Sum_probs=60.5
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEec
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 96 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~ 96 (456)
+++++|+|+|+||+|..++..|...|++++++++.+ ..|++.+++.+....|.+++...+.
T Consensus 125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~-------------------~~~a~~la~~~~~~~~~~~i~~~~~ 185 (283)
T 3jyo_A 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD-------------------TSRAQALADVINNAVGREAVVGVDA 185 (283)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS-------------------HHHHHHHHHHHHHHHTSCCEEEECS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC-------------------HHHHHHHHHHHHhhcCCceEEEcCH
Confidence 568899999999999999999999999999998643 2488888888888887777665431
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCC
Q 012768 97 YPEALIEMNPPFFSQFTLVVATQL 120 (456)
Q Consensus 97 ~~~~~~~~~~~~~~~~dvVi~~~~ 120 (456)
. .+ .+.+.++|+||.|+.
T Consensus 186 ~--~l----~~~l~~~DiVInaTp 203 (283)
T 3jyo_A 186 R--GI----EDVIAAADGVVNATP 203 (283)
T ss_dssp T--TH----HHHHHHSSEEEECSS
T ss_pred H--HH----HHHHhcCCEEEECCC
Confidence 1 11 122446899997763
No 20
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.12 E-value=0.002 Score=52.31 Aligned_cols=93 Identities=16% Similarity=0.161 Sum_probs=61.4
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecCh
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYP 98 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~~ 98 (456)
..+|+|+|+|++|..+++.|...|..+++++|.+. .|.+. +. .+.+.....+...
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~-------------------~~~~~----~~--~~~~~~~~~d~~~ 59 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL-------------------AALAV----LN--RMGVATKQVDAKD 59 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH-------------------HHHHH----HH--TTTCEEEECCTTC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH-------------------HHHHH----HH--hCCCcEEEecCCC
Confidence 45899999999999999999999977899987431 12222 11 3344443322111
Q ss_pred -hhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEE
Q 012768 99 -EALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIF 141 (456)
Q Consensus 99 -~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~ 141 (456)
..+ .+.+.++|+||.+.. ......+.+.|.+.+++.+.
T Consensus 60 ~~~~----~~~~~~~d~vi~~~~-~~~~~~~~~~~~~~g~~~~~ 98 (118)
T 3ic5_A 60 EAGL----AKALGGFDAVISAAP-FFLTPIIAKAAKAAGAHYFD 98 (118)
T ss_dssp HHHH----HHHTTTCSEEEECSC-GGGHHHHHHHHHHTTCEEEC
T ss_pred HHHH----HHHHcCCCEEEECCC-chhhHHHHHHHHHhCCCEEE
Confidence 111 234568999998874 34456778888999988764
No 21
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.09 E-value=0.0014 Score=54.91 Aligned_cols=91 Identities=14% Similarity=0.027 Sum_probs=54.0
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEec-Ch
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE-YP 98 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~-~~ 98 (456)
.+|+|+|+|.+|..+++.|...|. +++++|.+. .++ +.+.+-. .+.+...+. .+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~-------------------~~~----~~~~~~~-~~~~~~~d~~~~ 59 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDK-------------------DIC----KKASAEI-DALVINGDCTKI 59 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHH----HHHHHHC-SSEEEESCTTSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCH-------------------HHH----HHHHHhc-CcEEEEcCCCCH
Confidence 589999999999999999999995 688888432 122 1222211 232211111 11
Q ss_pred hhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCe
Q 012768 99 EALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVM 138 (456)
Q Consensus 99 ~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip 138 (456)
..+. ...+.++|+||.+..+......+...++..+..
T Consensus 60 ~~l~---~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~ 96 (140)
T 1lss_A 60 KTLE---DAGIEDADMYIAVTGKEEVNLMSSLLAKSYGIN 96 (140)
T ss_dssp HHHH---HTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCC
T ss_pred HHHH---HcCcccCCEEEEeeCCchHHHHHHHHHHHcCCC
Confidence 1111 122557999998876655555566667666543
No 22
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.88 E-value=0.0031 Score=60.05 Aligned_cols=73 Identities=25% Similarity=0.342 Sum_probs=57.6
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEec
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 96 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~ 96 (456)
++.++|+|+|+||.+..++-.|...|+++|+|++.+ ..|++.+++.+....+...+..
T Consensus 123 ~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt-------------------~~ra~~la~~~~~~~~~~~~~~--- 180 (269)
T 3tum_A 123 PAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPS-------------------TARMGAVCELLGNGFPGLTVST--- 180 (269)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSC-------------------HHHHHHHHHHHHHHCTTCEEES---
T ss_pred cccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCC-------------------HHHHHHHHHHHhccCCcceehh---
Confidence 456899999999999999999999999999998632 2488889999988888765331
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcC
Q 012768 97 YPEALIEMNPPFFSQFTLVVATQ 119 (456)
Q Consensus 97 ~~~~~~~~~~~~~~~~dvVi~~~ 119 (456)
..+.+.++|+||.|+
T Consensus 181 --------~~~~~~~~dliiNaT 195 (269)
T 3tum_A 181 --------QFSGLEDFDLVANAS 195 (269)
T ss_dssp --------CCSCSTTCSEEEECS
T ss_pred --------hhhhhhcccccccCC
Confidence 112355789999765
No 23
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.73 E-value=0.0026 Score=58.30 Aligned_cols=95 Identities=9% Similarity=0.058 Sum_probs=58.0
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecChhh
Q 012768 21 SVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYPEA 100 (456)
Q Consensus 21 ~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~~~~ 100 (456)
+|+|+|+|.+|..+++.|...|. .++++|.+. .+++ .+.+. ..+.+ +..+...
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~-------------------~~~~----~l~~~-~~~~~--i~gd~~~ 54 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDR-------------------ELCE----EFAKK-LKATI--IHGDGSH 54 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCH-------------------HHHH----HHHHH-SSSEE--EESCTTS
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCH-------------------HHHH----HHHHH-cCCeE--EEcCCCC
Confidence 79999999999999999999997 588998432 1222 22221 12332 2222211
Q ss_pred hhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHH-cCCeEEEE
Q 012768 101 LIEMNPPFFSQFTLVVATQLGEEKMIKLDRICRE-ANVMLIFA 142 (456)
Q Consensus 101 ~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~-~~ip~i~~ 142 (456)
........+.++|+||++..+......+...+++ ++.+-+.+
T Consensus 55 ~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 55 KEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp HHHHHHHTCCTTCEEEECCSCHHHHHHHHHHHHHTSCCCEEEE
T ss_pred HHHHHhcCcccCCEEEEecCCcHHHHHHHHHHHHHcCCCeEEE
Confidence 0000111356899999888776666667777776 45554444
No 24
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.73 E-value=0.0045 Score=53.28 Aligned_cols=99 Identities=11% Similarity=0.029 Sum_probs=60.9
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHh-CCCCEEEEEec
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQEL-NDAVKAKFIEE 96 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~l-np~v~v~~~~~ 96 (456)
.+.+|+|+|+|.+|..+++.|...|. .++++|.+.- .++ +.+.+. ...+.+..-+.
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~------------------~~~----~~~~~~~~~~~~~i~gd~ 58 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPE------------------DDI----KQLEQRLGDNADVIPGDS 58 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCH------------------HHH----HHHHHHHCTTCEEEESCT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCCh------------------HHH----HHHHHhhcCCCeEEEcCC
Confidence 46789999999999999999999996 5999985420 012 222222 23444332111
Q ss_pred C-hhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHc-CCeEEEE
Q 012768 97 Y-PEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREA-NVMLIFA 142 (456)
Q Consensus 97 ~-~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~-~ip~i~~ 142 (456)
. ++.+. ...+.++|+||++..+......+...+++. +.+.|.+
T Consensus 59 ~~~~~l~---~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 59 NDSSVLK---KAGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp TSHHHHH---HHTTTTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEE
T ss_pred CCHHHHH---HcChhhCCEEEEecCChHHHHHHHHHHHHHCCCCEEEE
Confidence 1 11111 112568999999887766666777778776 4333433
No 25
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.63 E-value=0.0028 Score=61.72 Aligned_cols=83 Identities=12% Similarity=0.147 Sum_probs=57.4
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEec
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 96 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~ 96 (456)
+++++|+|+|+||+|..++..|+..|++++++++.+.- -..|++.+++.+.+..+ +.+.....
T Consensus 152 l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~----------------~~~~a~~la~~~~~~~~-~~~~~~~~ 214 (315)
T 3tnl_A 152 IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDD----------------FYANAEKTVEKINSKTD-CKAQLFDI 214 (315)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSST----------------THHHHHHHHHHHHHHSS-CEEEEEET
T ss_pred ccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCc----------------hHHHHHHHHHHhhhhcC-CceEEecc
Confidence 56789999999999999999999999999999974310 02478888887776654 45554432
Q ss_pred Ch-hhhhcCCcCCCCCCcEEEEcCC
Q 012768 97 YP-EALIEMNPPFFSQFTLVVATQL 120 (456)
Q Consensus 97 ~~-~~~~~~~~~~~~~~dvVi~~~~ 120 (456)
.. ..+ .+.+.++|+||.|+.
T Consensus 215 ~~~~~l----~~~l~~aDiIINaTp 235 (315)
T 3tnl_A 215 EDHEQL----RKEIAESVIFTNATG 235 (315)
T ss_dssp TCHHHH----HHHHHTCSEEEECSS
T ss_pred chHHHH----HhhhcCCCEEEECcc
Confidence 11 111 122447889987763
No 26
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.62 E-value=0.0068 Score=62.21 Aligned_cols=95 Identities=9% Similarity=0.117 Sum_probs=66.5
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHh--CCCCEEEE
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQEL--NDAVKAKF 93 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~l--np~v~v~~ 93 (456)
.|++.+|+|+|.|.+|...++.|...|. +++++|++.. ..+.++ ...+++.
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~ga-~V~vi~~~~~-------------------------~~~~~l~~~~~i~~~- 61 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFI-------------------------PQFTVWANEGMLTLV- 61 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCC-------------------------HHHHHHHTTTSCEEE-
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhCcC-EEEEEcCCCC-------------------------HHHHHHHhcCCEEEE-
Confidence 3678999999999999999999999996 6999986421 111222 1234432
Q ss_pred EecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEEEee
Q 012768 94 IEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARS 144 (456)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~ 144 (456)
... + ..+.+.++|+||.+.+.......+...|++.++|+-.++-
T Consensus 62 -~~~---~---~~~~l~~~~lVi~at~~~~~n~~i~~~a~~~~i~vn~~d~ 105 (457)
T 1pjq_A 62 -EGP---F---DETLLDSCWLAIAATDDDTVNQRVSDAAESRRIFCNVVDA 105 (457)
T ss_dssp -ESS---C---CGGGGTTCSEEEECCSCHHHHHHHHHHHHHTTCEEEETTC
T ss_pred -ECC---C---CccccCCccEEEEcCCCHHHHHHHHHHHHHcCCEEEECCC
Confidence 221 1 2234668999998887766677889999999999544443
No 27
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.53 E-value=0.0084 Score=53.09 Aligned_cols=92 Identities=14% Similarity=0.007 Sum_probs=56.2
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHc-CCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEe
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLG-GIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIE 95 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~-Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~ 95 (456)
+.+.+|+|+|+|.+|..+++.|... |. .++++|.+. .|+ +.+.+. .+.+..-+
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~-------------------~~~----~~~~~~--g~~~~~gd 90 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIRE-------------------EAA----QQHRSE--GRNVISGD 90 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCH-------------------HHH----HHHHHT--TCCEEECC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCH-------------------HHH----HHHHHC--CCCEEEcC
Confidence 4467999999999999999999999 97 588888433 122 223333 23322111
Q ss_pred c-ChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcC
Q 012768 96 E-YPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREAN 136 (456)
Q Consensus 96 ~-~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ 136 (456)
. +++.+.+ ..-+.++|+||.+..+......+...++..+
T Consensus 91 ~~~~~~l~~--~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 91 ATDPDFWER--ILDTGHVKLVLLAMPHHQGNQTALEQLQRRN 130 (183)
T ss_dssp TTCHHHHHT--BCSCCCCCEEEECCSSHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHh--ccCCCCCCEEEEeCCChHHHHHHHHHHHHHC
Confidence 1 1111111 1025689999988776555555555666655
No 28
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.43 E-value=0.0061 Score=58.08 Aligned_cols=114 Identities=12% Similarity=0.272 Sum_probs=65.6
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCccccc--CCCccccccccccCcchHHHHHHHHHH-hCCC----
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVG--DLGNNFMLDESCVGESKAKSVCAFLQE-LNDA---- 88 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~--nl~r~f~~~~~dvG~~Ka~~~~~~l~~-lnp~---- 88 (456)
.|++.+|+|||+|.+|...++.|...|. ++|++|++.-..- .+. . +... -+. ++. ....+. +|+.
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga-~VtViap~~~~~l~~~~~-~-l~~~--~~~-~~~--~~~~~~~~~~~~~~~ 81 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSPDLHKSIIPKFG-K-FIQN--KDQ-PDY--REDAKRFINPNWDPT 81 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEEEECTTHHHHHC-G-GGC----------------CEEECTTCCTT
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCC-EEEEEcCCCCcchhHHHH-H-HHhc--ccc-ccc--cchhhcccccccccc
Confidence 4678999999999999999999999996 5999997542110 000 0 0000 000 000 000000 0110
Q ss_pred -CEE-EEEecChhhhhcCCcCCCC------CCcEEEEcCCChHHHHHHHHHHHHc---CCeEEEEe
Q 012768 89 -VKA-KFIEEYPEALIEMNPPFFS------QFTLVVATQLGEEKMIKLDRICREA---NVMLIFAR 143 (456)
Q Consensus 89 -v~v-~~~~~~~~~~~~~~~~~~~------~~dvVi~~~~~~~~~~~l~~~~~~~---~ip~i~~~ 143 (456)
-.+ ..+... + ..+.+. ++|+||++++....-..+...|++. ++|+-.++
T Consensus 82 ~g~i~~~i~~~---~---~~~dL~~l~~~~~adlViaat~d~~~n~~I~~~Ar~~f~~~i~VNvvd 141 (274)
T 1kyq_A 82 KNEIYEYIRSD---F---KDEYLDLENENDAWYIIMTCIPDHPESARIYHLCKERFGKQQLVNVAD 141 (274)
T ss_dssp SCCCSEEECSS---C---CGGGGCCSSTTCCEEEEEECCSCHHHHHHHHHHHHHHHCTTSEEEETT
T ss_pred cCCeeEEEcCC---C---CHHHHhhcccCCCeEEEEEcCCChHHHHHHHHHHHHhcCCCcEEEECC
Confidence 112 222221 1 122344 8999999888877788899999998 88854443
No 29
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.43 E-value=0.009 Score=50.61 Aligned_cols=88 Identities=18% Similarity=0.170 Sum_probs=54.1
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEec-C
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE-Y 97 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~-~ 97 (456)
+.+|+|+|+|.+|..+++.|...|. .++++|.+. .++ +.+++ ..+.+..-+. .
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~-------------------~~~----~~~~~--~g~~~i~gd~~~ 60 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSR-------------------TRV----DELRE--RGVRAVLGNAAN 60 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCH-------------------HHH----HHHHH--TTCEEEESCTTS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCH-------------------HHH----HHHHH--cCCCEEECCCCC
Confidence 4689999999999999999999997 699998543 122 22333 2343322111 1
Q ss_pred hhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHc
Q 012768 98 PEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREA 135 (456)
Q Consensus 98 ~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~ 135 (456)
++.+.. .-+.++|+||++..+......+...+++.
T Consensus 61 ~~~l~~---a~i~~ad~vi~~~~~~~~n~~~~~~a~~~ 95 (140)
T 3fwz_A 61 EEIMQL---AHLECAKWLILTIPNGYEAGEIVASARAK 95 (140)
T ss_dssp HHHHHH---TTGGGCSEEEECCSCHHHHHHHHHHHHHH
T ss_pred HHHHHh---cCcccCCEEEEECCChHHHHHHHHHHHHH
Confidence 111111 12457899998877655544455556654
No 30
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.43 E-value=0.0045 Score=60.19 Aligned_cols=84 Identities=12% Similarity=0.103 Sum_probs=55.7
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEec
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 96 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~ 96 (456)
+++++|+|+|+||.|..++..|...|++++++++.+.- ...|++.+++.+....+ ..+.....
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~----------------~~~~a~~la~~~~~~~~-~~v~~~~~ 208 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDD----------------FFEKAVAFAKRVNENTD-CVVTVTDL 208 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSST----------------HHHHHHHHHHHHHHHSS-CEEEEEET
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCc----------------hHHHHHHHHHHhhhccC-cceEEech
Confidence 56789999999999999999999999999999864310 02477877777776543 34443332
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCC
Q 012768 97 YPEALIEMNPPFFSQFTLVVATQL 120 (456)
Q Consensus 97 ~~~~~~~~~~~~~~~~dvVi~~~~ 120 (456)
..... ..+.+.++|+||.|+.
T Consensus 209 ~~l~~---~~~~l~~~DiIINaTp 229 (312)
T 3t4e_A 209 ADQHA---FTEALASADILTNGTK 229 (312)
T ss_dssp TCHHH---HHHHHHHCSEEEECSS
T ss_pred Hhhhh---hHhhccCceEEEECCc
Confidence 11000 0112446888887653
No 31
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.29 E-value=0.0097 Score=59.09 Aligned_cols=92 Identities=15% Similarity=0.142 Sum_probs=59.7
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecC
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY 97 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~ 97 (456)
++.||+|+|+|.+|..+++.|... ..+++.|.+. +.+..+.+.+.....+..
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~--~~v~~~~~~~--------------------------~~~~~~~~~~~~~~~d~~ 66 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVNN--------------------------ENLEKVKEFATPLKVDAS 66 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESCH--------------------------HHHHHHTTTSEEEECCTT
T ss_pred CccEEEEECCCHHHHHHHHHHhcC--CCeEEEEcCH--------------------------HHHHHHhccCCcEEEecC
Confidence 456799999999999999998653 4677766221 233344444443222211
Q ss_pred -hhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEEE
Q 012768 98 -PEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFA 142 (456)
Q Consensus 98 -~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~ 142 (456)
.+.+ .+.++++|+||.+..+. .-..+.+.|.+.++.+++.
T Consensus 67 d~~~l----~~~~~~~DvVi~~~p~~-~~~~v~~~~~~~g~~yvD~ 107 (365)
T 3abi_A 67 NFDKL----VEVMKEFELVIGALPGF-LGFKSIKAAIKSKVDMVDV 107 (365)
T ss_dssp CHHHH----HHHHTTCSEEEECCCGG-GHHHHHHHHHHHTCEEEEC
T ss_pred CHHHH----HHHHhCCCEEEEecCCc-ccchHHHHHHhcCcceEee
Confidence 1111 23467899999887553 4567889999999998864
No 32
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.21 E-value=0.007 Score=55.93 Aligned_cols=95 Identities=12% Similarity=0.134 Sum_probs=59.1
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecC
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY 97 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~ 97 (456)
.+.+|+|+|+|.+|..+++.|...|. ++++|.+. .++ +.+. +.+.+ +..+
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~--v~vid~~~-------------------~~~----~~~~---~~~~~--i~gd 57 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV--FVLAEDEN-------------------VRK----KVLR---SGANF--VHGD 57 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE--EEEESCGG-------------------GHH----HHHH---TTCEE--EESC
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe--EEEEECCH-------------------HHH----HHHh---cCCeE--EEcC
Confidence 35689999999999999999999987 88887432 111 2222 34443 2222
Q ss_pred hhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCe-EEEE
Q 012768 98 PEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVM-LIFA 142 (456)
Q Consensus 98 ~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip-~i~~ 142 (456)
..........-+.++|.||++..+......+...+++.+.. .|.+
T Consensus 58 ~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 58 PTRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDESVRIIA 103 (234)
T ss_dssp TTCHHHHHHTTCTTCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred CCCHHHHHhcCcchhcEEEEcCCCcHHHHHHHHHHHHHCCCCeEEE
Confidence 21110001123668999998887766666777788887653 3444
No 33
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=96.21 E-value=0.018 Score=58.88 Aligned_cols=99 Identities=16% Similarity=0.261 Sum_probs=63.0
Q ss_pred cCcEEEEcCChhHHHHHHHHHHc-CC--CcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEe
Q 012768 19 KASVCLLNCGPTGSETLKNLVLG-GI--GSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIE 95 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~-Gv--~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~ 95 (456)
+.+|+|+|+|++|+.++..|++. ++ ..|+++|.+... +.. .+.+ .++.....
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~----------------~~~----~~~~-----g~~~~~~~ 67 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTK----------------VDV----AQQY-----GVSFKLQQ 67 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCS----------------CCH----HHHH-----TCEEEECC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhh----------------hhH----Hhhc-----CCceeEEe
Confidence 57899999999999999999985 56 589999855431 100 1111 23444333
Q ss_pred cChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEEEe
Q 012768 96 EYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFAR 143 (456)
Q Consensus 96 ~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~ 143 (456)
.....+.+.-..++++.|+||.+..+ .....+-+.|.+.|+-+++..
T Consensus 68 Vdadnv~~~l~aLl~~~DvVIN~s~~-~~~l~Im~acleaGv~YlDTa 114 (480)
T 2ph5_A 68 ITPQNYLEVIGSTLEENDFLIDVSIG-ISSLALIILCNQKGALYINAA 114 (480)
T ss_dssp CCTTTHHHHTGGGCCTTCEEEECCSS-SCHHHHHHHHHHHTCEEEESS
T ss_pred ccchhHHHHHHHHhcCCCEEEECCcc-ccCHHHHHHHHHcCCCEEECC
Confidence 22222211122345556999976544 345678889999999877654
No 34
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=96.06 E-value=0.014 Score=57.02 Aligned_cols=36 Identities=17% Similarity=0.339 Sum_probs=31.3
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
+++..+|.|+|+|.+|+.++..|+..|.+.++++|-
T Consensus 4 ~m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di 39 (324)
T 3gvi_A 4 SMARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDI 39 (324)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CCcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeC
Confidence 356789999999999999999999999888999983
No 35
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.00 E-value=0.0096 Score=56.75 Aligned_cols=74 Identities=22% Similarity=0.266 Sum_probs=51.9
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEec
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 96 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~ 96 (456)
+++++|+|+|+||.|..++..|...|++++++++.+. .|++.+++.+.. ..+.....
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~-------------------~~a~~la~~~~~----~~~~~~~~ 174 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM-------------------AKALALRNELDH----SRLRISRY 174 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH-------------------HHHHHHHHHHCC----TTEEEECS
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH-------------------HHHHHHHHHhcc----CCeeEeeH
Confidence 4678999999999999999999999999999986321 367766665543 22333321
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCCC
Q 012768 97 YPEALIEMNPPFFSQFTLVVATQLG 121 (456)
Q Consensus 97 ~~~~~~~~~~~~~~~~dvVi~~~~~ 121 (456)
+++. . .++|+||.|+..
T Consensus 175 --~~l~----~--~~~DivInaTp~ 191 (272)
T 3pwz_A 175 --EALE----G--QSFDIVVNATSA 191 (272)
T ss_dssp --GGGT----T--CCCSEEEECSSG
T ss_pred --HHhc----c--cCCCEEEECCCC
Confidence 1221 1 579999987743
No 36
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=95.95 E-value=0.014 Score=55.88 Aligned_cols=74 Identities=22% Similarity=0.293 Sum_probs=52.9
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEec
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 96 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~ 96 (456)
+.+++|+|+|+||.|..++..|...|+.++++++.+ ..|++.+++.+.... .+.....
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~-------------------~~~a~~la~~~~~~~---~~~~~~~ 181 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQQPASITVTNRT-------------------FAKAEQLAELVAAYG---EVKAQAF 181 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS-------------------HHHHHHHHHHHGGGS---CEEEEEG
T ss_pred ccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC-------------------HHHHHHHHHHhhccC---CeeEeeH
Confidence 467899999999999999999999999999998632 236777777665542 2333221
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCCC
Q 012768 97 YPEALIEMNPPFFSQFTLVVATQLG 121 (456)
Q Consensus 97 ~~~~~~~~~~~~~~~~dvVi~~~~~ 121 (456)
+++ -.++|+||.|+..
T Consensus 182 --~~l-------~~~aDiIInaTp~ 197 (281)
T 3o8q_A 182 --EQL-------KQSYDVIINSTSA 197 (281)
T ss_dssp --GGC-------CSCEEEEEECSCC
T ss_pred --HHh-------cCCCCEEEEcCcC
Confidence 111 1579999987643
No 37
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=95.81 E-value=0.022 Score=56.57 Aligned_cols=93 Identities=14% Similarity=0.083 Sum_probs=56.6
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEec
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 96 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~ 96 (456)
=++++|+|+|+|++|..++++|+.. ..+++.|.+. .|++.++ ........+.
T Consensus 14 ~~~~~v~IiGaG~iG~~ia~~L~~~--~~V~V~~R~~-------------------~~a~~la-------~~~~~~~~d~ 65 (365)
T 2z2v_A 14 GRHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVNN-------------------ENLEKVK-------EFATPLKVDA 65 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESCH-------------------HHHHHHT-------TTSEEEECCT
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHcC--CeEEEEECCH-------------------HHHHHHH-------hhCCeEEEec
Confidence 3678999999999999999999988 6788887432 1332222 2222111111
Q ss_pred -ChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEEE
Q 012768 97 -YPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFA 142 (456)
Q Consensus 97 -~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~ 142 (456)
+...+ .+.++++|+||.|.. ...-..+...|.+.++.+++.
T Consensus 66 ~~~~~l----~~ll~~~DvVIn~~P-~~~~~~v~~a~l~~G~~~vD~ 107 (365)
T 2z2v_A 66 SNFDKL----VEVMKEFELVIGALP-GFLGFKSIKAAIKSKVDMVDV 107 (365)
T ss_dssp TCHHHH----HHHHTTCSCEEECCC-HHHHHHHHHHHHHTTCCEEEC
T ss_pred CCHHHH----HHHHhCCCEEEECCC-hhhhHHHHHHHHHhCCeEEEc
Confidence 11111 234567899988753 333345677888888887764
No 38
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.77 E-value=0.073 Score=48.71 Aligned_cols=39 Identities=13% Similarity=0.107 Sum_probs=28.5
Q ss_pred HHHHHHhcCcEEEEcC-ChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 12 QGQAALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 12 ~~q~~L~~~~VlIiG~-gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
..+..|++.+|+|.|+ |++|.++++.|+..|. ++++++.
T Consensus 14 ~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R 53 (236)
T 3e8x_A 14 RENLYFQGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVR 53 (236)
T ss_dssp -------CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccccCcCCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEEC
Confidence 3456799999999996 8999999999999996 6777763
No 39
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.65 E-value=0.0081 Score=61.70 Aligned_cols=98 Identities=17% Similarity=0.152 Sum_probs=60.7
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecChh
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYPE 99 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~~~ 99 (456)
.||+|+|+|-+|..+|+.|...|. .++++|.|.- ++ +.+.+.. ++. ++..+..
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~-~v~vId~d~~-------------------~~----~~~~~~~-~~~--~i~Gd~~ 56 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENN-DITIVDKDGD-------------------RL----RELQDKY-DLR--VVNGHAS 56 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTE-EEEEEESCHH-------------------HH----HHHHHHS-SCE--EEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHH-------------------HH----HHHHHhc-CcE--EEEEcCC
Confidence 479999999999999999998885 5999995541 11 2222211 233 3333322
Q ss_pred hhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHc-CCeEEEEee
Q 012768 100 ALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREA-NVMLIFARS 144 (456)
Q Consensus 100 ~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~-~ip~i~~~~ 144 (456)
...-....-++++|++|+++.+.+.-......+++. +.+-+.+..
T Consensus 57 ~~~~L~~Agi~~ad~~ia~t~~De~Nl~~~~~Ak~~~~~~~~iar~ 102 (461)
T 4g65_A 57 HPDVLHEAGAQDADMLVAVTNTDETNMAACQVAFTLFNTPNRIARI 102 (461)
T ss_dssp CHHHHHHHTTTTCSEEEECCSCHHHHHHHHHHHHHHHCCSSEEEEC
T ss_pred CHHHHHhcCCCcCCEEEEEcCChHHHHHHHHHHHHhcCCccceeEe
Confidence 110001123568999998887766666666677764 666555543
No 40
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=95.59 E-value=0.024 Score=55.25 Aligned_cols=75 Identities=12% Similarity=0.185 Sum_probs=51.0
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHh----CCCCEEE
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQEL----NDAVKAK 92 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~l----np~v~v~ 92 (456)
++..+|.|+|+|.+|+.++..|+..|++.++++|-+. .|++..+..|... +..+++.
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~-------------------~~~~g~a~dL~~~~~~~~~~~~v~ 63 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ-------------------GMPNGKALDLLQTCPIEGVDFKVR 63 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS-------------------SHHHHHHHHHHTTHHHHTCCCCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh-------------------HHHHHHHHHHHhhhhhcCCCcEEE
Confidence 4567999999999999999999999988899998432 2444444444442 2244444
Q ss_pred EEecChhhhhcCCcCCCCCCcEEEEcC
Q 012768 93 FIEEYPEALIEMNPPFFSQFTLVVATQ 119 (456)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~dvVi~~~ 119 (456)
... +.+.++++|+||.+.
T Consensus 64 ~t~---------d~~a~~~aDvVIi~a 81 (321)
T 3p7m_A 64 GTN---------DYKDLENSDVVIVTA 81 (321)
T ss_dssp EES---------CGGGGTTCSEEEECC
T ss_pred EcC---------CHHHHCCCCEEEEcC
Confidence 221 223467899999764
No 41
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=95.55 E-value=0.026 Score=53.73 Aligned_cols=35 Identities=17% Similarity=0.330 Sum_probs=31.6
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
++..+|+|+|+|++|..+++.|...|+ +++++|.+
T Consensus 127 ~~~~~v~iiGaG~~g~aia~~L~~~g~-~V~v~~r~ 161 (275)
T 2hk9_A 127 VKEKSILVLGAGGASRAVIYALVKEGA-KVFLWNRT 161 (275)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSS
T ss_pred cCCCEEEEECchHHHHHHHHHHHHcCC-EEEEEECC
Confidence 567899999999999999999999998 89998743
No 42
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=95.48 E-value=0.019 Score=54.83 Aligned_cols=112 Identities=11% Similarity=0.020 Sum_probs=64.8
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHh--CCCCEEEEE
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQEL--NDAVKAKFI 94 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~l--np~v~v~~~ 94 (456)
+++++|+|+|+||.|..++..|...|++++++++.+.-....+...+ +..-. +.+.+. ..++-|++.
T Consensus 115 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~-------~~~~~----~~~~~~~~~aDiVInaT 183 (277)
T 3don_A 115 IEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNI-------NKINL----SHAESHLDEFDIIINTT 183 (277)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCC-------EEECH----HHHHHTGGGCSEEEECC
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhc-------ccccH----hhHHHHhcCCCEEEECc
Confidence 67899999999999999999999999999999987764444444321 11011 112221 234444332
Q ss_pred ecC--hhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEE
Q 012768 95 EEY--PEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLI 140 (456)
Q Consensus 95 ~~~--~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i 140 (456)
..- +..-.....+.++.-.+|++...+... ..+.+.+++.|++.+
T Consensus 184 p~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P~~-T~ll~~A~~~G~~~~ 230 (277)
T 3don_A 184 PAGMNGNTDSVISLNRLASHTLVSDIVYNPYK-TPILIEAEQRGNPIY 230 (277)
T ss_dssp C-------CCSSCCTTCCSSCEEEESCCSSSS-CHHHHHHHHTTCCEE
T ss_pred cCCCCCCCcCCCCHHHcCCCCEEEEecCCCCC-CHHHHHHHHCcCEEe
Confidence 210 100000123445566677776654322 245667788887643
No 43
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=95.36 E-value=0.058 Score=52.22 Aligned_cols=71 Identities=17% Similarity=0.197 Sum_probs=48.7
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHH----hCCCCEEEEEec
Q 012768 21 SVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQE----LNDAVKAKFIEE 96 (456)
Q Consensus 21 ~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~----lnp~v~v~~~~~ 96 (456)
+|.|+|+|.+|+.++..|+..|++.++|+|-+ ..|++..+..|.. ++..++++....
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~-------------------~~~~~g~~~dl~~~~~~~~~~~~i~~t~d 61 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIART-------------------PGKPQGEALDLAHAAAELGVDIRISGSNS 61 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-------------------TTHHHHHHHHHHHHHHHHTCCCCEEEESC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCC-------------------hhhHHHHHHHHHHhhhhcCCCeEEEECCC
Confidence 68999999999999999999999669999843 1234333333433 445566554221
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcC
Q 012768 97 YPEALIEMNPPFFSQFTLVVATQ 119 (456)
Q Consensus 97 ~~~~~~~~~~~~~~~~dvVi~~~ 119 (456)
.+.+++.|+||.+.
T Consensus 62 ---------~~a~~~aD~Vi~~a 75 (308)
T 2d4a_B 62 ---------YEDMRGSDIVLVTA 75 (308)
T ss_dssp ---------GGGGTTCSEEEECC
T ss_pred ---------HHHhCCCCEEEEeC
Confidence 22367899999873
No 44
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.33 E-value=0.019 Score=48.66 Aligned_cols=35 Identities=17% Similarity=0.096 Sum_probs=31.1
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
+....+|+|+|+|++|..+++.|...|+. ++++|.
T Consensus 18 ~~~~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r 52 (144)
T 3oj0_A 18 KNGGNKILLVGNGMLASEIAPYFSYPQYK-VTVAGR 52 (144)
T ss_dssp HHCCCEEEEECCSHHHHHHGGGCCTTTCE-EEEEES
T ss_pred hccCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcC
Confidence 34478999999999999999999999988 999873
No 45
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=95.28 E-value=0.039 Score=55.60 Aligned_cols=98 Identities=14% Similarity=0.236 Sum_probs=63.1
Q ss_pred CcEEEEcCChhHHHHHHHHHHcC-C-CcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhC-CCCEEEEEec
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGG-I-GSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELN-DAVKAKFIEE 96 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~G-v-~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~ln-p~v~v~~~~~ 96 (456)
.+|+|+|+|++|..+++.|+..| + ..+++.|.+. .|++.+++.+.... +.+.....+.
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~-------------------~~~~~la~~l~~~~~~~~~~~~~D~ 62 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTL-------------------SKCQEIAQSIKAKGYGEIDITTVDA 62 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCH-------------------HHHHHHHHHHHHTTCCCCEEEECCT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCH-------------------HHHHHHHHHhhhhcCCceEEEEecC
Confidence 48999999999999999999988 3 6888887432 36666666665432 2343332221
Q ss_pred C-hhhhhcCCcCCCCC--CcEEEEcCCChHHHHHHHHHHHHcCCeEEE
Q 012768 97 Y-PEALIEMNPPFFSQ--FTLVVATQLGEEKMIKLDRICREANVMLIF 141 (456)
Q Consensus 97 ~-~~~~~~~~~~~~~~--~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~ 141 (456)
. ...+ .+.+++ .|+||.+..+. ....+.+.|.+.++.+++
T Consensus 63 ~d~~~l----~~~l~~~~~DvVin~ag~~-~~~~v~~a~l~~g~~vvD 105 (405)
T 4ina_A 63 DSIEEL----VALINEVKPQIVLNIALPY-QDLTIMEACLRTGVPYLD 105 (405)
T ss_dssp TCHHHH----HHHHHHHCCSEEEECSCGG-GHHHHHHHHHHHTCCEEE
T ss_pred CCHHHH----HHHHHhhCCCEEEECCCcc-cChHHHHHHHHhCCCEEE
Confidence 1 1111 122333 78998776543 345677788888888775
No 46
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.26 E-value=0.031 Score=53.28 Aligned_cols=34 Identities=15% Similarity=0.344 Sum_probs=29.4
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCC--CcEEEEeC
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGI--GSITVIDG 51 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv--~~itlvD~ 51 (456)
+..+|.|||+|..|+.+++.|...|. .+++++|.
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr 37 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNR 37 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECS
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeC
Confidence 35789999999999999999999996 26888873
No 47
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.19 E-value=0.12 Score=48.69 Aligned_cols=100 Identities=16% Similarity=0.147 Sum_probs=61.2
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecC
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY 97 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~ 97 (456)
+..+|+|.|+|.+|+.+++.|...|. +++.++...- . +.+.+++...+
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~---~--------------------------~~~~~~~~~~D-- 49 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGH-EVTGLRRSAQ---P--------------------------MPAGVQTLIAD-- 49 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTC-CEEEEECTTS---C--------------------------CCTTCCEEECC--
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcc---c--------------------------cccCCceEEcc--
Confidence 35689999999999999999999997 5777764321 1 11233332211
Q ss_pred hhhhhcCCcCCCCC-CcEEEEcC------------CChHHHHHHHHHHHHcCC-eEEEEeeccceee
Q 012768 98 PEALIEMNPPFFSQ-FTLVVATQ------------LGEEKMIKLDRICREANV-MLIFARSYGLTGF 150 (456)
Q Consensus 98 ~~~~~~~~~~~~~~-~dvVi~~~------------~~~~~~~~l~~~~~~~~i-p~i~~~~~G~~G~ 150 (456)
..+.. .-.+.+++ +|+||.+. .+......+.+.|++.++ .+|.+++.+.||.
T Consensus 50 l~d~~-~~~~~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~ 115 (286)
T 3gpi_A 50 VTRPD-TLASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQ 115 (286)
T ss_dssp TTCGG-GCTTGGGGCCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCC
T ss_pred CCChH-HHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcC
Confidence 11100 01223344 78888542 123345667778887774 6888888887773
No 48
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=95.18 E-value=0.046 Score=53.35 Aligned_cols=74 Identities=26% Similarity=0.183 Sum_probs=52.5
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCC-CcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCC---CCEEEE
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGI-GSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELND---AVKAKF 93 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv-~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp---~v~v~~ 93 (456)
...+|.|+|+|.+|+.+|..|+..|+ +.++|+|- ...|++..+..|....| .+++..
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~-------------------~~~k~~g~a~DL~~~~~~~~~~~i~~ 68 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI-------------------FKDKTKGDAIDLEDALPFTSPKKIYS 68 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS-------------------CHHHHHHHHHHHHTTGGGSCCCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeC-------------------ChHHHHHHHhhHhhhhhhcCCcEEEE
Confidence 45689999999999999999999998 58999983 22466666666665544 333321
Q ss_pred EecChhhhhcCCcCCCCCCcEEEEcCC
Q 012768 94 IEEYPEALIEMNPPFFSQFTLVVATQL 120 (456)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~dvVi~~~~ 120 (456)
.+.+.++++|+||.+..
T Consensus 69 ----------~~~~a~~~aDiVvi~ag 85 (326)
T 3vku_A 69 ----------AEYSDAKDADLVVITAG 85 (326)
T ss_dssp ----------CCGGGGTTCSEEEECCC
T ss_pred ----------CcHHHhcCCCEEEECCC
Confidence 12334778999997753
No 49
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=95.18 E-value=0.04 Score=51.84 Aligned_cols=36 Identities=17% Similarity=0.337 Sum_probs=32.3
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
+++ +|+|+|+|+.|..++..|...|+++++++|.+.
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 456 999999999999999999999999999998543
No 50
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=95.16 E-value=0.043 Score=55.40 Aligned_cols=96 Identities=17% Similarity=0.192 Sum_probs=61.5
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEec-C
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE-Y 97 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~-~ 97 (456)
+.+|+|+|+|.+|..+++.|...|+ .++++|.|.- ++ +.+++. .+.+-.-+. .
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~-------------------~v----~~~~~~--g~~vi~GDat~ 57 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPD-------------------HI----ETLRKF--GMKVFYGDATR 57 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHH-------------------HH----HHHHHT--TCCCEESCTTC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHH-------------------HH----HHHHhC--CCeEEEcCCCC
Confidence 4689999999999999999999997 5999986541 22 222222 222211111 1
Q ss_pred hhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCe-EEEEe
Q 012768 98 PEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVM-LIFAR 143 (456)
Q Consensus 98 ~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip-~i~~~ 143 (456)
++.+. ..-+.++++||++.++......+...+++.+.. -|.+.
T Consensus 58 ~~~L~---~agi~~A~~viv~~~~~~~n~~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 58 MDLLE---SAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp HHHHH---HTTTTTCSEEEECCSSHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHH---hcCCCccCEEEECCCChHHHHHHHHHHHHhCCCCeEEEE
Confidence 11111 112568999999888877777788888887643 34443
No 51
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=95.09 E-value=0.071 Score=51.22 Aligned_cols=71 Identities=17% Similarity=0.170 Sum_probs=48.6
Q ss_pred cEEEEcCChhHHHHHHHHHHcCC-CcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHH----hCCCCEEEEEe
Q 012768 21 SVCLLNCGPTGSETLKNLVLGGI-GSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQE----LNDAVKAKFIE 95 (456)
Q Consensus 21 ~VlIiG~gglG~eiaknLvl~Gv-~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~----lnp~v~v~~~~ 95 (456)
||.|+|+|++|+.+|-.|+..|. +.+.|+| +-+.|++..+.-|.. ++...++....
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~D-------------------i~~~~~~G~a~DL~h~~~~~~~~~~i~~~~ 62 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVD-------------------IAEDLAVGEAMDLAHAAAGIDKYPKIVGGA 62 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEEC-------------------SSHHHHHHHHHHHHHHHGGGTCCCEEEEES
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEe-------------------CCCCcchhhhhhhhcccccCCCCCeEecCC
Confidence 79999999999999999998876 7899998 222355555555555 33344433211
Q ss_pred cChhhhhcCCcCCCCCCcEEEEcC
Q 012768 96 EYPEALIEMNPPFFSQFTLVVATQ 119 (456)
Q Consensus 96 ~~~~~~~~~~~~~~~~~dvVi~~~ 119 (456)
+.+.+++.|+||.+.
T Consensus 63 ---------d~~~~~~aDvVvitA 77 (294)
T 2x0j_A 63 ---------DYSLLKGSEIIVVTA 77 (294)
T ss_dssp ---------CGGGGTTCSEEEECC
T ss_pred ---------CHHHhCCCCEEEEec
Confidence 223467899999764
No 52
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.04 E-value=0.082 Score=47.95 Aligned_cols=36 Identities=14% Similarity=0.254 Sum_probs=28.4
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 15 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 15 ~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
.++...+|.|+|+|.+|+.+++.|...|. +++++|.
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~-~V~~~~~ 50 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGH-EVTYYGS 50 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTC-EEEEECT
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcC
Confidence 46778899999999999999999999996 6888874
No 53
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=95.00 E-value=0.03 Score=54.48 Aligned_cols=37 Identities=27% Similarity=0.350 Sum_probs=31.0
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHcCC-CcEEEEeC
Q 012768 15 AALEKASVCLLNCGPTGSETLKNLVLGGI-GSITVIDG 51 (456)
Q Consensus 15 ~~L~~~~VlIiG~gglG~eiaknLvl~Gv-~~itlvD~ 51 (456)
.+++..+|.|+|+|.+|..++..|+..|. ..+.++|-
T Consensus 2 ~~m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di 39 (317)
T 3d0o_A 2 NKFKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDL 39 (317)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 34566799999999999999999999887 67999983
No 54
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=94.94 E-value=0.046 Score=53.42 Aligned_cols=72 Identities=24% Similarity=0.185 Sum_probs=50.8
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCC-CcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCC----CCEEEE
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGI-GSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELND----AVKAKF 93 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv-~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp----~v~v~~ 93 (456)
..+|.|+|+|.+|+.+|..|+..|. +.++++|-+ ..|++..+.-|+...| .+++.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~-------------------~~k~~g~a~DL~~~~~~~~~~v~i~- 64 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN-------------------KEKAMGDVMDLNHGKAFAPQPVKTS- 64 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC-------------------HHHHHHHHHHHHHTGGGSSSCCEEE-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc-------------------hHHHHHHHHHHHhccccccCCeEEE-
Confidence 4689999999999999999999998 589999832 2466665555665444 33332
Q ss_pred EecChhhhhcCCcCCCCCCcEEEEcC
Q 012768 94 IEEYPEALIEMNPPFFSQFTLVVATQ 119 (456)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~dvVi~~~ 119 (456)
.. +.+.++++|+||.+.
T Consensus 65 -~~--------~~~a~~~aDvVvi~a 81 (326)
T 3pqe_A 65 -YG--------TYEDCKDADIVCICA 81 (326)
T ss_dssp -EE--------CGGGGTTCSEEEECC
T ss_pred -eC--------cHHHhCCCCEEEEec
Confidence 11 223467899999764
No 55
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=94.90 E-value=0.036 Score=54.90 Aligned_cols=121 Identities=17% Similarity=0.254 Sum_probs=68.5
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHh-CCCCEEEEEe
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQEL-NDAVKAKFIE 95 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~l-np~v~v~~~~ 95 (456)
++..+|.|||+|.+|..+|++|+..|. .++++|.+.-....+... |-.-+....+.+... .|++-+..+.
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~--------g~~~~~s~~e~~~~a~~~DvVi~~vp 90 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALERE--------GIAGARSIEEFCAKLVKPRVVWLMVP 90 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT--------TCBCCSSHHHHHHHSCSSCEEEECSC
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHC--------CCEEeCCHHHHHhcCCCCCEEEEeCC
Confidence 456789999999999999999999995 688998654322211111 111111122223322 2355444433
Q ss_pred cC-hhhhhcCCcCCCCCCcEEEEcC-CChHHHHHHHHHHHHcCCeEEEEeecc
Q 012768 96 EY-PEALIEMNPPFFSQFTLVVATQ-LGEEKMIKLDRICREANVMLIFARSYG 146 (456)
Q Consensus 96 ~~-~~~~~~~~~~~~~~~dvVi~~~-~~~~~~~~l~~~~~~~~ip~i~~~~~G 146 (456)
.. ...+...-...++.-++||.+. ........+.+.+...++.|+.+.+.|
T Consensus 91 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsG 143 (358)
T 4e21_A 91 AAVVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSG 143 (358)
T ss_dssp GGGHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEEC
T ss_pred HHHHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCC
Confidence 21 1111111123355556777654 444556677778888899998887655
No 56
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=94.89 E-value=0.19 Score=48.71 Aligned_cols=112 Identities=14% Similarity=0.091 Sum_probs=65.3
Q ss_pred HHHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhC-----CC
Q 012768 15 AALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELN-----DA 88 (456)
Q Consensus 15 ~~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~ln-----p~ 88 (456)
..++..+|+|.| .|.+|+.+++.|...|. +++.+|...-. . ......+..+. +.
T Consensus 21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~------------------~-~~~~~~~~~~~~~~~~~~ 80 (351)
T 3ruf_A 21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTG------------------H-QYNLDEVKTLVSTEQWSR 80 (351)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSC------------------C-HHHHHHHHHTSCHHHHTT
T ss_pred CCCCCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCC------------------c-hhhhhhhhhccccccCCc
Confidence 456788999999 58899999999999994 57777632210 0 01112222221 34
Q ss_pred CEEEEEecChhhhhcCCcCCCCCCcEEEEcCCC--h---------------HHHHHHHHHHHHcCC-eEEEEeecccee
Q 012768 89 VKAKFIEEYPEALIEMNPPFFSQFTLVVATQLG--E---------------EKMIKLDRICREANV-MLIFARSYGLTG 149 (456)
Q Consensus 89 v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~--~---------------~~~~~l~~~~~~~~i-p~i~~~~~G~~G 149 (456)
+++ +..+..+.. .-...++++|+||.+... . .....+.+.|++.++ .+|.+++.+.+|
T Consensus 81 ~~~--~~~Dl~d~~-~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg 156 (351)
T 3ruf_A 81 FCF--IEGDIRDLT-TCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYG 156 (351)
T ss_dssp EEE--EECCTTCHH-HHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGT
T ss_pred eEE--EEccCCCHH-HHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcC
Confidence 443 332221110 012345689999965432 1 112345677888876 788888887776
No 57
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=94.82 E-value=0.11 Score=50.35 Aligned_cols=45 Identities=9% Similarity=0.011 Sum_probs=33.0
Q ss_pred ccCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 8 IWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 8 lwG~~~q~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
+|+.+---.-...+|.|||+|.+|..++++|+..|...++++|.+
T Consensus 13 ~~~~~~~~~~M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 13 LGTENLYFQSMMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp --CCCHHHHTSCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGG
T ss_pred cCcccCcccccCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 455543212234689999999999999999999996578888844
No 58
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.76 E-value=0.072 Score=52.02 Aligned_cols=35 Identities=17% Similarity=0.267 Sum_probs=30.8
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
...+|.|+|+|.+|+.+|..|+..|...++++|.+
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~ 47 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDLGDVYMFDII 47 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 44689999999999999999999999559999843
No 59
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=94.75 E-value=0.075 Score=49.81 Aligned_cols=34 Identities=21% Similarity=0.365 Sum_probs=29.8
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEe
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD 50 (456)
+...+|.|||+|.+|..+++.|...|...++++|
T Consensus 8 ~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~ 41 (266)
T 3d1l_A 8 IEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYS 41 (266)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEe
Confidence 4557899999999999999999999976577877
No 60
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.67 E-value=0.15 Score=49.16 Aligned_cols=34 Identities=21% Similarity=0.275 Sum_probs=29.7
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCC-CcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGI-GSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv-~~itlvD~d 52 (456)
..+|+|+|+|++|+.++..|+..|. +.++++|.+
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4689999999999999999999995 479999843
No 61
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.64 E-value=0.18 Score=48.63 Aligned_cols=32 Identities=19% Similarity=0.440 Sum_probs=28.9
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCC-CcEEEEeC
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGI-GSITVIDG 51 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv-~~itlvD~ 51 (456)
.+|+|+|+|.+|+.++..|+..|. ..++++|.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~ 34 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDA 34 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcC
Confidence 479999999999999999999997 67999884
No 62
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=94.62 E-value=0.12 Score=45.59 Aligned_cols=34 Identities=26% Similarity=0.391 Sum_probs=28.8
Q ss_pred cCcEEEEcC-ChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 19 KASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 19 ~~~VlIiG~-gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
..+|+|.|+ |++|.++++.|...| .++++++.+.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r~~ 37 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVRDS 37 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCG
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCh
Confidence 368999996 899999999999999 5788887653
No 63
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=94.54 E-value=0.19 Score=45.03 Aligned_cols=94 Identities=13% Similarity=0.062 Sum_probs=56.7
Q ss_pred cEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecChh
Q 012768 21 SVCLLN-CGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYPE 99 (456)
Q Consensus 21 ~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~~~ 99 (456)
+|+|.| .|++|..+++.|+..|. ++++++.+. ..+.++.+.+++... +..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~--------------------------~~~~~~~~~~~~~~~--D~~ 52 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNA--------------------------GKITQTHKDINILQK--DIF 52 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCS--------------------------HHHHHHCSSSEEEEC--CGG
T ss_pred eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCc--------------------------hhhhhccCCCeEEec--ccc
Confidence 699999 58899999999999994 677776331 112223355554332 221
Q ss_pred hhhcCCcCCCCCCcEEEEcCCC--------hHHHHHHHHHHHHcC-CeEEEEeecc
Q 012768 100 ALIEMNPPFFSQFTLVVATQLG--------EEKMIKLDRICREAN-VMLIFARSYG 146 (456)
Q Consensus 100 ~~~~~~~~~~~~~dvVi~~~~~--------~~~~~~l~~~~~~~~-ip~i~~~~~G 146 (456)
+ ...+.+.++|+||.+... ......+.+.|++.+ ..+|..++.+
T Consensus 53 d---~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~ 105 (221)
T 3ew7_A 53 D---LTLSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAA 105 (221)
T ss_dssp G---CCHHHHTTCSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC
T ss_pred C---hhhhhhcCCCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEecce
Confidence 1 111446788999965422 123355666777764 4566665544
No 64
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=94.50 E-value=0.1 Score=50.54 Aligned_cols=72 Identities=25% Similarity=0.205 Sum_probs=49.0
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCC-CcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCC----CCEEEE
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGI-GSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELND----AVKAKF 93 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv-~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp----~v~v~~ 93 (456)
..+|.|+|+|.+|+.++..|...|. +.++++|-+ ..|++..+..|....+ .+++..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~-------------------~~~~~~~~~dl~~~~~~~~~~~~i~~ 66 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN-------------------ESKAIGDAMDFNHGKVFAPKPVDIWH 66 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS-------------------HHHHHHHHHHHHHHTTSSSSCCEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC-------------------cchHHHHHhhHHHHhhhcCCCeEEEc
Confidence 3689999999999999999999885 679999832 1244444444444444 444442
Q ss_pred EecChhhhhcCCcCCCCCCcEEEEcC
Q 012768 94 IEEYPEALIEMNPPFFSQFTLVVATQ 119 (456)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~dvVi~~~ 119 (456)
. ..+.++++|+||.+.
T Consensus 67 --~--------~~~al~~aDvViia~ 82 (316)
T 1ldn_A 67 --G--------DYDDCRDADLVVICA 82 (316)
T ss_dssp --C--------CGGGTTTCSEEEECC
T ss_pred --C--------cHHHhCCCCEEEEcC
Confidence 1 123477899999874
No 65
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=94.49 E-value=0.24 Score=47.84 Aligned_cols=106 Identities=13% Similarity=0.229 Sum_probs=60.3
Q ss_pred HHHhcCcEEEEcC-ChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEE
Q 012768 15 AALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKF 93 (456)
Q Consensus 15 ~~L~~~~VlIiG~-gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~ 93 (456)
..++..+|+|.|+ |.+|..+++.|...|. +++++|...-... .. +..+.....+..
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~---~~-------------------~~~~~~~~~~~~ 79 (343)
T 2b69_A 23 MEKDRKRILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRK---RN-------------------VEHWIGHENFEL 79 (343)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCG---GG-------------------TGGGTTCTTEEE
T ss_pred cccCCCEEEEEcCccHHHHHHHHHHHHCCC-EEEEEeCCCccch---hh-------------------hhhhccCCceEE
Confidence 4567789999996 8899999999999995 6777764321000 00 001111112333
Q ss_pred EecChhhhhcCCcCCCCCCcEEEEcCCC---------hH--------HHHHHHHHHHHcCCeEEEEeecccee
Q 012768 94 IEEYPEALIEMNPPFFSQFTLVVATQLG---------EE--------KMIKLDRICREANVMLIFARSYGLTG 149 (456)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~dvVi~~~~~---------~~--------~~~~l~~~~~~~~ip~i~~~~~G~~G 149 (456)
+..+ +. ...+.++|+||.+... .. ....+.+.|.+.++.+|.+++.+.+|
T Consensus 80 ~~~D---~~---~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g 146 (343)
T 2b69_A 80 INHD---VV---EPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYG 146 (343)
T ss_dssp EECC---TT---SCCCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGB
T ss_pred EeCc---cC---ChhhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcHHHhC
Confidence 3322 11 1235678999954321 11 12345567777788899988887776
No 66
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=94.46 E-value=0.077 Score=51.54 Aligned_cols=36 Identities=19% Similarity=0.338 Sum_probs=32.0
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
++..+|.|+|+|.+|+.+|..|+..|.+.++++|.+
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 345789999999999999999999999889999843
No 67
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.46 E-value=0.14 Score=49.75 Aligned_cols=32 Identities=22% Similarity=0.374 Sum_probs=29.1
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
.+|.|+|+|.+|+.++..|+..|...++++|-
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di 36 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDI 36 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeC
Confidence 58999999999999999999999955999984
No 68
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=94.42 E-value=0.11 Score=50.05 Aligned_cols=31 Identities=19% Similarity=0.213 Sum_probs=28.1
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCC-cEEEEeC
Q 012768 21 SVCLLNCGPTGSETLKNLVLGGIG-SITVIDG 51 (456)
Q Consensus 21 ~VlIiG~gglG~eiaknLvl~Gv~-~itlvD~ 51 (456)
+|.|+|+|.+|+.++..|+..|.. .++++|-
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~ 33 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDI 33 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 799999999999999999999974 7999983
No 69
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=94.32 E-value=0.042 Score=53.66 Aligned_cols=89 Identities=10% Similarity=0.119 Sum_probs=56.6
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecCh
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYP 98 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~~ 98 (456)
+.+|+|+|+|.+|..+++.|...|. ++++|.|. .+++ +++ ..+.+ +..++
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~--v~vid~~~-------------------~~~~-----~~~--~~~~~--i~gd~ 164 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV--FVLAEDEN-------------------VRKK-----VLR--SGANF--VHGDP 164 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE--EEEESCGG-------------------GHHH-----HHH--TTCEE--EESCT
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc--EEEEeCCh-------------------hhhh-----HHh--CCcEE--EEeCC
Confidence 5689999999999999999999998 88888543 1222 222 23433 32222
Q ss_pred hhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCC
Q 012768 99 EALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANV 137 (456)
Q Consensus 99 ~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~i 137 (456)
.+.......-++++|.|+++..+......+...+++.+.
T Consensus 165 ~~~~~L~~a~i~~a~~vi~~~~~d~~n~~~~~~ar~~~~ 203 (336)
T 1lnq_A 165 TRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDE 203 (336)
T ss_dssp TSHHHHHHTCSTTEEEEEECCSSHHHHHHHHHHHHTTCT
T ss_pred CCHHHHHhcChhhccEEEEcCCccHHHHHHHHHHHHHCC
Confidence 111000112356899999887766666666677777765
No 70
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=94.27 E-value=0.052 Score=53.11 Aligned_cols=77 Identities=16% Similarity=0.167 Sum_probs=52.8
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHcCC-CcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCC---CCE
Q 012768 15 AALEKASVCLLNCGPTGSETLKNLVLGGI-GSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELND---AVK 90 (456)
Q Consensus 15 ~~L~~~~VlIiG~gglG~eiaknLvl~Gv-~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp---~v~ 90 (456)
......+|.|+|+|.+|+.+|..|+..|. ..++|+|- ...|++..+.-|....+ ...
T Consensus 15 ~~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di-------------------~~~~~~g~a~DL~~~~~~~~~~~ 75 (331)
T 4aj2_A 15 EQVPQNKITVVGVGAVGMACAISILMKDLADELALVDV-------------------IEDKLKGEMMDLQHGSLFLKTPK 75 (331)
T ss_dssp --CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS-------------------CHHHHHHHHHHHHHTGGGCSCCE
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeC-------------------ChHHHHHHHHhhhhhhhccCCCe
Confidence 45667899999999999999999999997 47999983 23467776666765532 222
Q ss_pred EEEEecChhhhhcCCcCCCCCCcEEEEcC
Q 012768 91 AKFIEEYPEALIEMNPPFFSQFTLVVATQ 119 (456)
Q Consensus 91 v~~~~~~~~~~~~~~~~~~~~~dvVi~~~ 119 (456)
+.. . .+.+.++++|+||.+.
T Consensus 76 i~~-~--------~d~~~~~~aDiVvi~a 95 (331)
T 4aj2_A 76 IVS-S--------KDYSVTANSKLVIITA 95 (331)
T ss_dssp EEE-C--------SSGGGGTTEEEEEECC
T ss_pred EEE-c--------CCHHHhCCCCEEEEcc
Confidence 221 1 1223477999998764
No 71
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=94.25 E-value=0.18 Score=45.33 Aligned_cols=96 Identities=17% Similarity=0.122 Sum_probs=57.4
Q ss_pred cEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecChh
Q 012768 21 SVCLLN-CGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYPE 99 (456)
Q Consensus 21 ~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~~~ 99 (456)
+|+|.| .|++|.++++.|...|. ++++++.+.-....+ +.+++ +..+..
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~---------------------------~~~~~--~~~D~~ 51 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY---------------------------NNVKA--VHFDVD 51 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC---------------------------TTEEE--EECCTT
T ss_pred eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc---------------------------CCceE--EEeccc
Confidence 699999 78899999999999994 688887543211111 23332 222221
Q ss_pred hhhcCCcCCCCCCcEEEEcCC---------ChHHHHHHHHHHHHcCC-eEEEEeecc
Q 012768 100 ALIEMNPPFFSQFTLVVATQL---------GEEKMIKLDRICREANV-MLIFARSYG 146 (456)
Q Consensus 100 ~~~~~~~~~~~~~dvVi~~~~---------~~~~~~~l~~~~~~~~i-p~i~~~~~G 146 (456)
+..+.-.+.++++|+||.+.. +......+.+.|++.++ .+|..++.+
T Consensus 52 d~~~~~~~~~~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~ 108 (219)
T 3dqp_A 52 WTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF 108 (219)
T ss_dssp SCHHHHHTTTTTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCHHHHHHHHcCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence 100001244667888886532 23345667778888775 566666544
No 72
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.23 E-value=0.11 Score=50.37 Aligned_cols=34 Identities=9% Similarity=0.255 Sum_probs=30.4
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
..+|.|+|+|.+|+.+|..|+..|...++++|.+
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~ 37 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIA 37 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 3589999999999999999999998669999854
No 73
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=94.22 E-value=0.16 Score=45.73 Aligned_cols=94 Identities=14% Similarity=0.175 Sum_probs=56.8
Q ss_pred cEEEEcC-ChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHH-hCCCCEEEEEecCh
Q 012768 21 SVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQE-LNDAVKAKFIEEYP 98 (456)
Q Consensus 21 ~VlIiG~-gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~-lnp~v~v~~~~~~~ 98 (456)
+|+|.|+ |++|..+++.|+..|. ++++++.+. ..+.+ ..+.+++.. .+.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~--------------------------~~~~~~~~~~~~~~~--~D~ 52 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDP--------------------------QKAADRLGATVATLV--KEP 52 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCH--------------------------HHHHHHTCTTSEEEE--CCG
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecc--------------------------cccccccCCCceEEe--ccc
Confidence 6999996 8899999999999995 677765321 11111 123454432 222
Q ss_pred hhhhcCCcCCCCCCcEEEEcCCC----------hHHHHHHHHHHHHcCCeEEEEeecc
Q 012768 99 EALIEMNPPFFSQFTLVVATQLG----------EEKMIKLDRICREANVMLIFARSYG 146 (456)
Q Consensus 99 ~~~~~~~~~~~~~~dvVi~~~~~----------~~~~~~l~~~~~~~~ip~i~~~~~G 146 (456)
.+ ...+.+.++|+||.+... ......+.+.|++.+..+|..++.|
T Consensus 53 ~d---~~~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~ 107 (224)
T 3h2s_A 53 LV---LTEADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGSA 107 (224)
T ss_dssp GG---CCHHHHTTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECCGG
T ss_pred cc---ccHhhcccCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEecce
Confidence 11 111446688999865422 2234455667777777777776654
No 74
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=94.20 E-value=0.39 Score=44.91 Aligned_cols=97 Identities=11% Similarity=0.101 Sum_probs=61.5
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecCh
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYP 98 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~~ 98 (456)
..+|+|.|+|.+|+.+++.|...|. +++.++.+. .++. .+.. +.++ .+..+.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~----~~~~--~~~~--~~~~D~ 56 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNP-------------------DQME----AIRA--SGAE--PLLWPG 56 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCG-------------------GGHH----HHHH--TTEE--EEESSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcCh-------------------hhhh----hHhh--CCCe--EEEecc
Confidence 3689999999999999999999986 566665321 1221 1222 2333 333332
Q ss_pred hhhhcCCcCCCCCCcEEEEcCCC----hHHHHHHHHHHHH--cC-CeEEEEeecccee
Q 012768 99 EALIEMNPPFFSQFTLVVATQLG----EEKMIKLDRICRE--AN-VMLIFARSYGLTG 149 (456)
Q Consensus 99 ~~~~~~~~~~~~~~dvVi~~~~~----~~~~~~l~~~~~~--~~-ip~i~~~~~G~~G 149 (456)
.+ .+ +.++|+||.+... ......+.+.|++ .+ ..+|++++.+.+|
T Consensus 57 ~d-----~~-~~~~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg 108 (286)
T 3ius_A 57 EE-----PS-LDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYG 108 (286)
T ss_dssp SC-----CC-CTTCCEEEECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGC
T ss_pred cc-----cc-cCCCCEEEECCCccccccHHHHHHHHHHHhhcCCceEEEEeecceecC
Confidence 22 22 7789999965422 2334566677777 44 4688888888877
No 75
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.20 E-value=0.069 Score=51.57 Aligned_cols=51 Identities=22% Similarity=0.220 Sum_probs=31.9
Q ss_pred CcccccccCHHHHH--HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 2 SMSTLRIWGEQGQA--ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 2 y~RQlrlwG~~~q~--~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
|+-+-+.|-.+... ..+..+|.|||+|.+|+.++++|+..|. .++++|.+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~m~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 54 (310)
T 3doj_A 2 GSSHHHHHHSSGLVPRGSHMMEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTL 54 (310)
T ss_dssp ----------------CCCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSG
T ss_pred CCcccccccccccCcccccCCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 44444444333333 4445689999999999999999999997 799998654
No 76
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=94.13 E-value=0.26 Score=46.88 Aligned_cols=66 Identities=12% Similarity=0.129 Sum_probs=48.6
Q ss_pred HHHHHHHhcCcEEEEc-CChhHHHHHHHHHHcCCC--cEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCC
Q 012768 11 EQGQAALEKASVCLLN-CGPTGSETLKNLVLGGIG--SITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELND 87 (456)
Q Consensus 11 ~~~q~~L~~~~VlIiG-~gglG~eiaknLvl~Gv~--~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp 87 (456)
......|++++|+|.| .||+|.++|+.|+..|.+ ++.++|.+ ..+.+.+++.+.+.++
T Consensus 25 ~~~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~-------------------~~~~~~~~~~l~~~~~ 85 (287)
T 3rku_A 25 RKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARR-------------------LEKLEELKKTIDQEFP 85 (287)
T ss_dssp HHHHHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESC-------------------HHHHHHHHHHHHHHCT
T ss_pred ccchhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECC-------------------HHHHHHHHHHHHhhCC
Confidence 3445779999999998 688999999999999885 67776532 2356666777777766
Q ss_pred CCEEEEEe
Q 012768 88 AVKAKFIE 95 (456)
Q Consensus 88 ~v~v~~~~ 95 (456)
..++..+.
T Consensus 86 ~~~~~~~~ 93 (287)
T 3rku_A 86 NAKVHVAQ 93 (287)
T ss_dssp TCEEEEEE
T ss_pred CCeEEEEE
Confidence 66655543
No 77
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.13 E-value=0.22 Score=48.24 Aligned_cols=33 Identities=24% Similarity=0.241 Sum_probs=29.3
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCC-cEEEEeCC
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIG-SITVIDGS 52 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~-~itlvD~d 52 (456)
.+|.|||+|.+|..+++.|...|.. .++++|.+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~ 67 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 67 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 6899999999999999999999984 78888743
No 78
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=94.08 E-value=0.16 Score=48.41 Aligned_cols=98 Identities=14% Similarity=0.153 Sum_probs=58.3
Q ss_pred cCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecC
Q 012768 19 KASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY 97 (456)
Q Consensus 19 ~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~ 97 (456)
..+|+|.| .|.+|+.+++.|...|. +++.++... ....+. .+++...+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~-~~~~~~---------------------------~~~~~~~Dl~ 52 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSI-GNKAIN---------------------------DYEYRVSDYT 52 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCC-C--------------------------------CCEEEECCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCC-CcccCC---------------------------ceEEEEcccc
Confidence 36899999 58899999999999996 677777541 100010 2222221111
Q ss_pred hhhhhcCCcCCCCCCcEEEEcCCC-------------hHHHHHHHHHHHHcCCe-EEEEeecccee
Q 012768 98 PEALIEMNPPFFSQFTLVVATQLG-------------EEKMIKLDRICREANVM-LIFARSYGLTG 149 (456)
Q Consensus 98 ~~~~~~~~~~~~~~~dvVi~~~~~-------------~~~~~~l~~~~~~~~ip-~i~~~~~G~~G 149 (456)
.+.+ .+.++++|+||.+... ......+.+.|++.+++ +|..++.+.+|
T Consensus 53 ~~~~----~~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg 114 (311)
T 3m2p_A 53 LEDL----INQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYS 114 (311)
T ss_dssp HHHH----HHHTTTCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCC
T ss_pred HHHH----HHhhcCCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhC
Confidence 1111 1234467777744211 22245677788888876 88888887776
No 79
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=94.07 E-value=0.35 Score=46.49 Aligned_cols=117 Identities=21% Similarity=0.252 Sum_probs=68.2
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecCh-
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYP- 98 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~~- 98 (456)
++|.+||+|..|..+|+||+.+|. .++++|.+.-....+. +.|-..+...++..+ +.++-+..+....
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~-~v~v~dr~~~~~~~l~--------~~Ga~~a~s~~e~~~--~~dvv~~~l~~~~~ 72 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLV--------AAGASAARSARDAVQ--GADVVISMLPASQH 72 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHH--------HTTCEECSSHHHHHT--TCSEEEECCSCHHH
T ss_pred CEEEEeeehHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHH--------HcCCEEcCCHHHHHh--cCCceeecCCchHH
Confidence 479999999999999999999997 5888874432111111 112222222222221 2344444332211
Q ss_pred -hhhhcCC---cCCCCCCcEEEE-cCCChHHHHHHHHHHHHcCCeEEEEeeccc
Q 012768 99 -EALIEMN---PPFFSQFTLVVA-TQLGEEKMIKLDRICREANVMLIFARSYGL 147 (456)
Q Consensus 99 -~~~~~~~---~~~~~~~dvVi~-~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~ 147 (456)
..+.... ...+..=++||+ ++.+......+.+.+.++++-|+.+-+.|-
T Consensus 73 v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaPVsGg 126 (300)
T 3obb_A 73 VEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGG 126 (300)
T ss_dssp HHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESC
T ss_pred HHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCCCC
Confidence 1111111 222344467775 456677788999999999999999877764
No 80
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.07 E-value=0.2 Score=48.31 Aligned_cols=35 Identities=14% Similarity=0.228 Sum_probs=30.7
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
...+|.|||+|.+|..++++|+..|...++++|.+
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 34689999999999999999999998789999864
No 81
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=94.06 E-value=0.041 Score=54.09 Aligned_cols=40 Identities=20% Similarity=0.261 Sum_probs=29.2
Q ss_pred HHHHHHhcCcEEEEc-CChhHHHHHHHHHHc-CCCcEEEEeCC
Q 012768 12 QGQAALEKASVCLLN-CGPTGSETLKNLVLG-GIGSITVIDGS 52 (456)
Q Consensus 12 ~~q~~L~~~~VlIiG-~gglG~eiaknLvl~-Gv~~itlvD~d 52 (456)
.|+..++..+|+|.| .|.+|+.+++.|... |. +++.+|..
T Consensus 17 ~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~ 58 (372)
T 3slg_A 17 QGPGSMKAKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQ 58 (372)
T ss_dssp ------CCCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESC
T ss_pred cCCcccCCCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCC
Confidence 456778889999999 588999999999998 64 68888754
No 82
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=94.01 E-value=0.19 Score=48.56 Aligned_cols=32 Identities=25% Similarity=0.406 Sum_probs=28.7
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
.+|.|+|+|.+|..++..|+..|.-.++++|-
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di 34 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDI 34 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeC
Confidence 58999999999999999999999744999984
No 83
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=94.01 E-value=0.17 Score=49.28 Aligned_cols=33 Identities=9% Similarity=0.415 Sum_probs=29.9
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCC-CcEEEEe
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGI-GSITVID 50 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv-~~itlvD 50 (456)
...+|.|+|+|.+|+.+|..|+..|+ +.++++|
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~D 53 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVD 53 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEE
Confidence 34789999999999999999999998 5799998
No 84
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=93.96 E-value=0.14 Score=49.51 Aligned_cols=39 Identities=15% Similarity=0.192 Sum_probs=26.9
Q ss_pred HHHHHhcCcEEEEcC-ChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 13 GQAALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 13 ~q~~L~~~~VlIiG~-gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.+..++..+|+|.|+ |.+|+.+++.|...|. +++++|..
T Consensus 13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~ 52 (347)
T 4id9_A 13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLR 52 (347)
T ss_dssp --------CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred cccccCCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCC
Confidence 456788899999996 8899999999999995 57777754
No 85
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=93.81 E-value=0.12 Score=50.65 Aligned_cols=35 Identities=14% Similarity=0.300 Sum_probs=30.9
Q ss_pred HhcCcEEEEcC-ChhHHHHHHHHHHcCC-CcEEEEeC
Q 012768 17 LEKASVCLLNC-GPTGSETLKNLVLGGI-GSITVIDG 51 (456)
Q Consensus 17 L~~~~VlIiG~-gglG~eiaknLvl~Gv-~~itlvD~ 51 (456)
+...+|.|+|+ |.+|+.+|..|+..|. ..++++|-
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi 42 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDP 42 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECS
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeC
Confidence 45679999997 9999999999999997 57999983
No 86
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=93.75 E-value=0.2 Score=48.64 Aligned_cols=72 Identities=21% Similarity=0.159 Sum_probs=50.0
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCC-CcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhC---CCCEEEEEe
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGI-GSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELN---DAVKAKFIE 95 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv-~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~ln---p~v~v~~~~ 95 (456)
.+|.|+|+|.+|..++..|+..|. ..+.|+|- ...|++..+..|.... +.+++..
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di-------------------~~~~~~g~~~dl~~~~~~~~~~~v~~-- 64 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDV-------------------VKDRTKGDALDLEDAQAFTAPKKIYS-- 64 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS-------------------SHHHHHHHHHHHHGGGGGSCCCEEEE--
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC-------------------CchHHHHHHHHHHHHHHhcCCeEEEE--
Confidence 689999999999999999999885 46889883 2235555555555443 3444443
Q ss_pred cChhhhhcCCcCCCCCCcEEEEcCC
Q 012768 96 EYPEALIEMNPPFFSQFTLVVATQL 120 (456)
Q Consensus 96 ~~~~~~~~~~~~~~~~~dvVi~~~~ 120 (456)
. ..+.+++.|+||.+..
T Consensus 65 ~--------~~~a~~~aDvVii~ag 81 (318)
T 1ez4_A 65 G--------EYSDCKDADLVVITAG 81 (318)
T ss_dssp C--------CGGGGTTCSEEEECCC
T ss_pred C--------CHHHhCCCCEEEECCC
Confidence 1 2234779999998754
No 87
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=93.63 E-value=0.28 Score=47.50 Aligned_cols=71 Identities=8% Similarity=0.094 Sum_probs=47.8
Q ss_pred cEEEEcCChhHHHHHHHHHHcCC-CcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHh----CCCCEEEEEe
Q 012768 21 SVCLLNCGPTGSETLKNLVLGGI-GSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQEL----NDAVKAKFIE 95 (456)
Q Consensus 21 ~VlIiG~gglG~eiaknLvl~Gv-~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~l----np~v~v~~~~ 95 (456)
+|.|+|+|.+|+.++..|+..|+ ..++++|-+. .|++..+.-|+.. ...+++...+
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~-------------------~k~~g~a~DL~~~~~~~~~~~~v~~~~ 62 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD-------------------GMPQGKALDMRESSPIHGFDTRVTGTN 62 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST-------------------THHHHHHHHHHHHHHHHTCCCEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch-------------------HHHHHHHHHHhccccccCCCcEEEECC
Confidence 79999999999999999999997 4799998322 2444433344432 2345544221
Q ss_pred cChhhhhcCCcCCCCCCcEEEEcC
Q 012768 96 EYPEALIEMNPPFFSQFTLVVATQ 119 (456)
Q Consensus 96 ~~~~~~~~~~~~~~~~~dvVi~~~ 119 (456)
+.+.++++|+||.+.
T Consensus 63 ---------~~~a~~~aDvVii~a 77 (314)
T 3nep_X 63 ---------DYGPTEDSDVCIITA 77 (314)
T ss_dssp ---------SSGGGTTCSEEEECC
T ss_pred ---------CHHHhCCCCEEEECC
Confidence 234477899999774
No 88
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.62 E-value=0.18 Score=48.54 Aligned_cols=32 Identities=28% Similarity=0.418 Sum_probs=28.5
Q ss_pred cEEEEcCChhHHHHHHHHHHcCC-CcEEEEeCC
Q 012768 21 SVCLLNCGPTGSETLKNLVLGGI-GSITVIDGS 52 (456)
Q Consensus 21 ~VlIiG~gglG~eiaknLvl~Gv-~~itlvD~d 52 (456)
+|.|+|+|.+|+.++..|+..|. +.++++|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 79999999999999999999995 569999843
No 89
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.58 E-value=0.11 Score=49.36 Aligned_cols=32 Identities=25% Similarity=0.354 Sum_probs=28.9
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.+|.|||+|.+|+.+|..|+..|. +++++|.+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 689999999999999999999998 68888843
No 90
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=93.57 E-value=0.24 Score=46.48 Aligned_cols=34 Identities=21% Similarity=0.298 Sum_probs=30.5
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
++. +|+|+|+|++|..+++.|...|+ +++++|.+
T Consensus 115 l~~-~v~iiG~G~~g~~~a~~l~~~g~-~v~v~~r~ 148 (263)
T 2d5c_A 115 LKG-PALVLGAGGAGRAVAFALREAGL-EVWVWNRT 148 (263)
T ss_dssp CCS-CEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCC-eEEEECCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 556 99999999999999999999998 89998743
No 91
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.56 E-value=0.054 Score=53.84 Aligned_cols=37 Identities=22% Similarity=0.364 Sum_probs=35.2
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
+|+..+|+|+|+|..|..+++.|+..|+++|+++|..
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 6889999999999999999999999999999999976
No 92
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=93.54 E-value=0.24 Score=50.97 Aligned_cols=127 Identities=11% Similarity=0.115 Sum_probs=64.1
Q ss_pred HHHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHh-CCCCEEE
Q 012768 14 QAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQEL-NDAVKAK 92 (456)
Q Consensus 14 q~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~l-np~v~v~ 92 (456)
...+.+.+|.|||+|..|+.+|.+|+..|. .++++|.+.-....+.... . +-|-.-+....+.+..+ .+++-+.
T Consensus 10 ~~~~~~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~~r~~~~~~~l~~~~--~--~~gi~~~~s~~e~v~~l~~aDvVil 84 (480)
T 2zyd_A 10 HHHMSKQQIGVVGMAVMGRNLALNIESRGY-TVSIFNRSREKTEEVIAEN--P--GKKLVPYYTVKEFVESLETPRRILL 84 (480)
T ss_dssp -----CBSEEEECCSHHHHHHHHHHHTTTC-CEEEECSSHHHHHHHHHHS--T--TSCEEECSSHHHHHHTBCSSCEEEE
T ss_pred ccccCCCeEEEEccHHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHhhC--C--CCCeEEeCCHHHHHhCCCCCCEEEE
Confidence 346888999999999999999999999997 5889886532211111100 0 00000001112223322 1455444
Q ss_pred EEecC--hhhhhcCCcCCCCCCcEEEEcCC-ChHHHHHHHHHHHHcCCeEEEEeec
Q 012768 93 FIEEY--PEALIEMNPPFFSQFTLVVATQL-GEEKMIKLDRICREANVMLIFARSY 145 (456)
Q Consensus 93 ~~~~~--~~~~~~~~~~~~~~~dvVi~~~~-~~~~~~~l~~~~~~~~ip~i~~~~~ 145 (456)
.+... ...+.+.-...++.-++||.+.. .......+.+.+...++.++.+.+.
T Consensus 85 ~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~pv~ 140 (480)
T 2zyd_A 85 MVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVS 140 (480)
T ss_dssp CSCSSSHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred ECCCHHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCccc
Confidence 44331 11222111233444567775543 3333445566666667777766554
No 93
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=93.48 E-value=0.11 Score=53.56 Aligned_cols=122 Identities=14% Similarity=0.197 Sum_probs=69.1
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcc--hHHHHHHHHHHh-CCCCEEEEEe
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGES--KAKSVCAFLQEL-NDAVKAKFIE 95 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~--Ka~~~~~~l~~l-np~v~v~~~~ 95 (456)
..+|.|||+|..|..+|++|+..|. .++++|.+.-....+... ...|.. -+....+.+..+ .+++-+..+.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~-----g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp 77 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLAN-----EAKGTKVVGAQSLKEMVSKLKKPRRIILLVK 77 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHT-----TTTTSSCEECSSHHHHHHTBCSSCEEEECSC
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc-----ccCCCceeccCCHHHHHhhccCCCEEEEecC
Confidence 4689999999999999999999997 689998654222211110 000100 011122223322 3555444443
Q ss_pred cC--hhhhhcCCcCCCCCCcEEEEcCC-ChHHHHHHHHHHHHcCCeEEEEeecc
Q 012768 96 EY--PEALIEMNPPFFSQFTLVVATQL-GEEKMIKLDRICREANVMLIFARSYG 146 (456)
Q Consensus 96 ~~--~~~~~~~~~~~~~~~dvVi~~~~-~~~~~~~l~~~~~~~~ip~i~~~~~G 146 (456)
.. ...+.+.-...++.-++||.+.. .......+.+.+...++.|+.+.+.|
T Consensus 78 ~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsG 131 (484)
T 4gwg_A 78 AGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSG 131 (484)
T ss_dssp SSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred ChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccC
Confidence 32 11111111234556678886654 44445566677788899999887655
No 94
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=93.40 E-value=0.34 Score=46.02 Aligned_cols=37 Identities=24% Similarity=0.332 Sum_probs=29.1
Q ss_pred HHhcCcEEEEcC-ChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 16 ALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 16 ~L~~~~VlIiG~-gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
.+...+|+|.|+ |.+|+.+++.|...|. +++.+|...
T Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~ 41 (321)
T 3vps_A 4 NTLKHRILITGGAGFIGGHLARALVASGE-EVTVLDDLR 41 (321)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC-CEEEECCCS
T ss_pred ccCCCeEEEECCCChHHHHHHHHHHHCCC-EEEEEecCC
Confidence 356789999996 8899999999999996 688877544
No 95
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=93.39 E-value=0.059 Score=51.87 Aligned_cols=35 Identities=11% Similarity=0.190 Sum_probs=32.3
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
+..++|+|+|+|++|..++..|...|+.+++++|.
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR 173 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANR 173 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECS
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 56789999999999999999999999999999873
No 96
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=93.38 E-value=0.064 Score=50.08 Aligned_cols=34 Identities=15% Similarity=0.209 Sum_probs=30.1
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCC---CcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGI---GSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv---~~itlvD~d 52 (456)
..+|.|||+|.+|+.++++|...|. ..++++|.+
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~ 40 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPS 40 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCC
Confidence 3589999999999999999999995 679999854
No 97
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=93.36 E-value=0.067 Score=51.12 Aligned_cols=35 Identities=17% Similarity=0.180 Sum_probs=32.3
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
+++++|+|+|+||.|..++..|...|++++++++.
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nR 154 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTR 154 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEES
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeC
Confidence 46789999999999999999999999999999863
No 98
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.31 E-value=0.53 Score=42.29 Aligned_cols=33 Identities=21% Similarity=0.288 Sum_probs=28.3
Q ss_pred CcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 20 ASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 20 ~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
.+|+|.| .|.+|..+++.|...| .++++++...
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG-FEVTAVVRHP 38 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT-CEEEEECSCG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEcCc
Confidence 5899999 5889999999999999 4788887654
No 99
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=93.30 E-value=0.14 Score=49.78 Aligned_cols=31 Identities=26% Similarity=0.443 Sum_probs=27.8
Q ss_pred cEEEEcCChhHHHHHHHHHHcCC-CcEEEEeC
Q 012768 21 SVCLLNCGPTGSETLKNLVLGGI-GSITVIDG 51 (456)
Q Consensus 21 ~VlIiG~gglG~eiaknLvl~Gv-~~itlvD~ 51 (456)
+|.|+|+|.+|+.++..|+..|. +.++++|.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~ 33 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDV 33 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 79999999999999999999995 46899884
No 100
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=93.30 E-value=0.11 Score=49.61 Aligned_cols=34 Identities=18% Similarity=0.298 Sum_probs=30.4
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 17 LEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 17 L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
++.++|+|.| +||+|..+++.|+..|.. ++++|.
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~-V~i~~R 151 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCGR 151 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEEC
Confidence 5678999999 999999999999999986 888863
No 101
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=93.22 E-value=0.27 Score=46.24 Aligned_cols=30 Identities=13% Similarity=0.188 Sum_probs=27.0
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 21 SVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 21 ~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
+|.|||+|.+|+.+++.|...|. +++++|.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~ 31 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSR 31 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 69999999999999999999997 6888763
No 102
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=93.18 E-value=0.54 Score=44.52 Aligned_cols=30 Identities=27% Similarity=0.401 Sum_probs=25.8
Q ss_pred cEEEEcC-ChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 21 SVCLLNC-GPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 21 ~VlIiG~-gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
+|+|.|+ |.+|..+++.|...|. +++++|.
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r 32 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVELGY-EVVVVDN 32 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred EEEEECCCChHHHHHHHHHHhCCC-EEEEEeC
Confidence 7999996 8899999999999996 5777764
No 103
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=93.06 E-value=0.072 Score=53.03 Aligned_cols=38 Identities=24% Similarity=0.415 Sum_probs=36.0
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
+++..+|+|+|+|..|..+++.|+.+|+++|+++|..-
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 68899999999999999999999999999999999875
No 104
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=93.00 E-value=0.35 Score=47.11 Aligned_cols=34 Identities=21% Similarity=0.284 Sum_probs=28.4
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHH--cCCCcEEEEeC
Q 012768 17 LEKASVCLLN-CGPTGSETLKNLVL--GGIGSITVIDG 51 (456)
Q Consensus 17 L~~~~VlIiG-~gglG~eiaknLvl--~Gv~~itlvD~ 51 (456)
++..+|+|.| .|.+|+.+++.|.. .|. +++++|.
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~-~V~~~~r 44 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDK 44 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTS-EEEEEEC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCC-eEEEEEC
Confidence 5678999997 68899999999999 776 5777774
No 105
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=92.98 E-value=0.13 Score=49.33 Aligned_cols=32 Identities=19% Similarity=0.381 Sum_probs=28.8
Q ss_pred CcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 20 ASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 20 ~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.+|.||| +|.+|+.+++.|...|. .++++|.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~-~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGY-PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 5899999 99999999999999997 68888854
No 106
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=92.98 E-value=0.092 Score=47.40 Aligned_cols=33 Identities=18% Similarity=0.394 Sum_probs=29.6
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
...|+|||+|+.|..+|..|++.|+ +++|+|..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~-~V~v~Ek~ 34 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGH-QVHLFDKS 34 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECC
Confidence 3579999999999999999999999 59999954
No 107
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=92.97 E-value=0.11 Score=48.43 Aligned_cols=30 Identities=23% Similarity=0.244 Sum_probs=27.0
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCCcEEEEe
Q 012768 21 SVCLLNCGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 21 ~VlIiG~gglG~eiaknLvl~Gv~~itlvD 50 (456)
+|.|||+|.+|+.++.+|...|...++++|
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~ 31 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIAN 31 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEEC
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEEC
Confidence 699999999999999999999965678876
No 108
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.96 E-value=0.22 Score=47.86 Aligned_cols=31 Identities=16% Similarity=0.136 Sum_probs=26.8
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
..+|+|+|+|++|+.++..|. .| ..+++++.
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g-~~V~~~~r 32 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LY-HDVTVVTR 32 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TT-SEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHh-cC-CceEEEEC
Confidence 368999999999999999999 88 46888763
No 109
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.94 E-value=0.13 Score=50.25 Aligned_cols=33 Identities=24% Similarity=0.262 Sum_probs=28.8
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
..+|+|+|+|.+|+.++..|...|. .++++|.+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~-~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 3689999999999999999999996 58888743
No 110
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=92.88 E-value=0.17 Score=51.81 Aligned_cols=38 Identities=18% Similarity=0.103 Sum_probs=30.2
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
.++..+|+|+|+|++|..++..|+..|-.+++++|.+.
T Consensus 20 ~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~ 57 (467)
T 2axq_A 20 RHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTL 57 (467)
T ss_dssp ---CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSH
T ss_pred CCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 46678999999999999999999998434799998653
No 111
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=92.86 E-value=1.2 Score=42.42 Aligned_cols=110 Identities=12% Similarity=-0.023 Sum_probs=61.8
Q ss_pred HhcCcEEEEcC-ChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhC-CCCEEEEE
Q 012768 17 LEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELN-DAVKAKFI 94 (456)
Q Consensus 17 L~~~~VlIiG~-gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~ln-p~v~v~~~ 94 (456)
+++.+|+|.|+ |.+|+.+++.|...|. +++++|.+. .+.+.+.+.+.... +.++ .+
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~--~~ 66 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSA-------------------SKLANLQKRWDAKYPGRFE--TA 66 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSH-------------------HHHHHHHHHHHHHSTTTEE--EE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCc-------------------ccHHHHHHHhhccCCCceE--EE
Confidence 45678999995 8899999999999995 577665321 12333334443333 3333 33
Q ss_pred -ecChhhhhcCCcCCCCCCcEEEEcCC------ChH--------HHHHHHHHHHH-cC-CeEEEEeecccee
Q 012768 95 -EEYPEALIEMNPPFFSQFTLVVATQL------GEE--------KMIKLDRICRE-AN-VMLIFARSYGLTG 149 (456)
Q Consensus 95 -~~~~~~~~~~~~~~~~~~dvVi~~~~------~~~--------~~~~l~~~~~~-~~-ip~i~~~~~G~~G 149 (456)
..+..+. +.-.+.++++|+||.+.. +.. ....+.+.|.+ .+ ..+|.+++.+.+|
T Consensus 67 ~~~D~~d~-~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~ 137 (342)
T 1y1p_A 67 VVEDMLKQ-GAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSAL 137 (342)
T ss_dssp ECSCTTST-TTTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTC
T ss_pred EecCCcCh-HHHHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhc
Confidence 2222111 111345668999995432 111 12344556663 34 4677777766554
No 112
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.85 E-value=0.39 Score=46.83 Aligned_cols=33 Identities=15% Similarity=0.197 Sum_probs=29.6
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.+|.|+|+|.+|+.+|..|+..|...++++|.+
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 589999999999999999999998559999843
No 113
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=92.85 E-value=0.24 Score=48.28 Aligned_cols=72 Identities=26% Similarity=0.190 Sum_probs=49.0
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCC-CcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhC---CCCEEEEE
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGI-GSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELN---DAVKAKFI 94 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv-~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~ln---p~v~v~~~ 94 (456)
..+|.|+|+|.+|..++..|+..|. ..+.|+|- ...|++..+..|.... +.+++..
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di-------------------~~~~~~g~~~dl~~~~~~~~~~~i~~- 68 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI-------------------FKDKTKGDAIDLSNALPFTSPKKIYS- 68 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS-------------------CHHHHHHHHHHHHTTGGGSCCCEEEE-
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC-------------------CchHhHHHHHHHHHHHHhcCCeEEEE-
Confidence 4689999999999999999998885 46888883 2235555444454433 3444443
Q ss_pred ecChhhhhcCCcCCCCCCcEEEEcC
Q 012768 95 EEYPEALIEMNPPFFSQFTLVVATQ 119 (456)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~dvVi~~~ 119 (456)
. ..+.+++.|+||.+.
T Consensus 69 -~--------~~~a~~~aDvVii~a 84 (326)
T 2zqz_A 69 -A--------EYSDAKDADLVVITA 84 (326)
T ss_dssp -C--------CGGGGGGCSEEEECC
T ss_pred -C--------CHHHhCCCCEEEEcC
Confidence 1 223467899999775
No 114
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=92.72 E-value=0.39 Score=45.24 Aligned_cols=32 Identities=25% Similarity=0.239 Sum_probs=27.7
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCC-cEEEEeC
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIG-SITVIDG 51 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~-~itlvD~ 51 (456)
.+|.|||+|.+|..+++.|...|.. +++++|.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~ 34 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDI 34 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 4799999999999999999999963 5887773
No 115
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=92.65 E-value=0.48 Score=45.61 Aligned_cols=32 Identities=16% Similarity=0.302 Sum_probs=27.8
Q ss_pred cEEEEcCChhHHHHHHHHHHcCC-CcEEEEeCC
Q 012768 21 SVCLLNCGPTGSETLKNLVLGGI-GSITVIDGS 52 (456)
Q Consensus 21 ~VlIiG~gglG~eiaknLvl~Gv-~~itlvD~d 52 (456)
+|+|+|+|.+|+.++..|+..|. ..++++|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~ 34 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVV 34 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 79999999999999999999764 469999843
No 116
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=92.65 E-value=0.49 Score=47.15 Aligned_cols=37 Identities=16% Similarity=0.297 Sum_probs=32.1
Q ss_pred HHHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 15 AALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 15 ~~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
..++..+|+|.| .|++|+++++.|+..|...++++|.
T Consensus 31 ~~~~~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r 68 (399)
T 3nzo_A 31 SVVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDI 68 (399)
T ss_dssp HHHHTCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECS
T ss_pred HHhCCCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEEC
Confidence 347789999999 5789999999999999888998873
No 117
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=92.49 E-value=0.33 Score=46.42 Aligned_cols=33 Identities=18% Similarity=0.203 Sum_probs=28.9
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
..+|.|||+|.+|+.++++|+..|. .++++|.+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGL-STWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-eEEEEECC
Confidence 4689999999999999999999996 68888743
No 118
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=92.46 E-value=0.12 Score=49.02 Aligned_cols=33 Identities=12% Similarity=0.233 Sum_probs=30.7
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEe
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD 50 (456)
..++|+|+|+||.|..++..|...|++++++++
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~n 150 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYA 150 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEEC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 357899999999999999999999999999986
No 119
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=92.44 E-value=0.46 Score=49.01 Aligned_cols=125 Identities=13% Similarity=0.127 Sum_probs=66.5
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHh-CCCCEEEEEec
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQEL-NDAVKAKFIEE 96 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~l-np~v~v~~~~~ 96 (456)
...+|.|||+|..|+.+|.+|+..|. .++++|.+.-....+..... . ..|-.-+....+.+..+ .+++-+..+..
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~dr~~~~~~~l~~~~~-~--~~gi~~~~s~~e~v~~l~~aDvVil~Vp~ 84 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGF-TVCAYNRTQSKVDHFLANEA-K--GKSIIGATSIEDFISKLKRPRKVMLLVKA 84 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSHHHHHHHHTTT-T--TSSEECCSSHHHHHHTSCSSCEEEECCCS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHcccc-c--CCCeEEeCCHHHHHhcCCCCCEEEEEcCC
Confidence 35789999999999999999999997 68999865422221111000 0 00100011122233322 25555554443
Q ss_pred C--hhhhhcCCcCCCCCCcEEEEcC-CChHHHHHHHHHHHHcCCeEEEEeecc
Q 012768 97 Y--PEALIEMNPPFFSQFTLVVATQ-LGEEKMIKLDRICREANVMLIFARSYG 146 (456)
Q Consensus 97 ~--~~~~~~~~~~~~~~~dvVi~~~-~~~~~~~~l~~~~~~~~ip~i~~~~~G 146 (456)
. ...+.+.-...++.=++||.+. ........+.+.+...++.++.+.+.|
T Consensus 85 ~~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVsg 137 (497)
T 2p4q_A 85 GAPVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVSG 137 (497)
T ss_dssp SHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred hHHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCccc
Confidence 2 1112111123455556777554 333344556666667788887665544
No 120
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=92.36 E-value=0.052 Score=52.69 Aligned_cols=35 Identities=14% Similarity=0.125 Sum_probs=26.6
Q ss_pred HhcCcEEEEcC-ChhHHHHHHHHHHcCCC-cEEEEeC
Q 012768 17 LEKASVCLLNC-GPTGSETLKNLVLGGIG-SITVIDG 51 (456)
Q Consensus 17 L~~~~VlIiG~-gglG~eiaknLvl~Gv~-~itlvD~ 51 (456)
+...+|+|.|+ |.+|+.+++.|...|.. .++.+|.
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~ 58 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDA 58 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEec
Confidence 55678999996 88999999999999943 4555554
No 121
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=92.34 E-value=0.15 Score=46.47 Aligned_cols=31 Identities=13% Similarity=0.268 Sum_probs=26.6
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEE-Ee
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITV-ID 50 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itl-vD 50 (456)
-.+|.|||+|.+|..+++.|...|. .+++ +|
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~-~V~~v~~ 54 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQI-PAIIANS 54 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTC-CEEEECT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 3689999999999999999999997 4555 54
No 122
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=92.33 E-value=0.34 Score=46.81 Aligned_cols=71 Identities=18% Similarity=0.128 Sum_probs=48.8
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCC-CcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhC---CCCEEEEEe
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGI-GSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELN---DAVKAKFIE 95 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv-~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~ln---p~v~v~~~~ 95 (456)
.||.|+|+|.+|..++..|+..|. +.++|+|-+ ..|++..+..|.... ..++++. .
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~-------------------~~k~~g~a~dl~~~~~~~~~~~v~~-~ 60 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLD-------------------RKLAQAHAEDILHATPFAHPVWVWA-G 60 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS-------------------HHHHHHHHHHHHTTGGGSCCCEEEE-C
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC-------------------hhHHHHHHHHHHHhHhhcCCeEEEE-C
Confidence 379999999999999999998875 569999832 235555455555533 3445443 1
Q ss_pred cChhhhhcCCcCCCCCCcEEEEcC
Q 012768 96 EYPEALIEMNPPFFSQFTLVVATQ 119 (456)
Q Consensus 96 ~~~~~~~~~~~~~~~~~dvVi~~~ 119 (456)
+.+.+++.|+||.+.
T Consensus 61 ---------~~~a~~~aD~Vii~a 75 (310)
T 2xxj_A 61 ---------SYGDLEGARAVVLAA 75 (310)
T ss_dssp ---------CGGGGTTEEEEEECC
T ss_pred ---------CHHHhCCCCEEEECC
Confidence 123477999999764
No 123
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=92.32 E-value=0.15 Score=48.45 Aligned_cols=33 Identities=33% Similarity=0.428 Sum_probs=29.3
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
.+|.|||+|.+|+.++++|...|. .++++|.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCH
Confidence 579999999999999999999995 688888654
No 124
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=92.30 E-value=1.3 Score=40.10 Aligned_cols=37 Identities=30% Similarity=0.467 Sum_probs=31.2
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHcCCC-cEEEEeCC
Q 012768 16 ALEKASVCLLN-CGPTGSETLKNLVLGGIG-SITVIDGS 52 (456)
Q Consensus 16 ~L~~~~VlIiG-~gglG~eiaknLvl~Gv~-~itlvD~d 52 (456)
.+...+|+|.| .|++|..+++.|+..|.. +++++|.+
T Consensus 15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~ 53 (242)
T 2bka_A 15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRR 53 (242)
T ss_dssp HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESS
T ss_pred hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcC
Confidence 36678899999 689999999999999974 78888754
No 125
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.30 E-value=0.24 Score=47.01 Aligned_cols=33 Identities=27% Similarity=0.384 Sum_probs=29.1
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
.+|.|||+|.+|+.++++|+..|. .++++|.+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTC-CEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCH
Confidence 479999999999999999999995 688988654
No 126
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=92.22 E-value=0.11 Score=52.74 Aligned_cols=35 Identities=23% Similarity=0.525 Sum_probs=32.9
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCC--CcEEEEe
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGI--GSITVID 50 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv--~~itlvD 50 (456)
.++..+|+|+|+||.|..+++.|...|+ ++|+++|
T Consensus 183 ~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 183 KISEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 4677899999999999999999999999 8999998
No 127
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.13 E-value=0.17 Score=49.04 Aligned_cols=34 Identities=18% Similarity=0.332 Sum_probs=29.9
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCC-CcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGI-GSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv-~~itlvD~d 52 (456)
..+|.|+|+|.+|..++-.|+..|. +.++++|-+
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4689999999999999999999886 569999843
No 128
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.11 E-value=0.092 Score=50.30 Aligned_cols=34 Identities=15% Similarity=0.093 Sum_probs=29.7
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
..+|.|||+|.+|..++++|...|. .++++|.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTT-CEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 4689999999999999999999996 688888543
No 129
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=92.08 E-value=0.32 Score=46.59 Aligned_cols=115 Identities=12% Similarity=0.131 Sum_probs=63.7
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhC--CCCEEEEEec
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELN--DAVKAKFIEE 96 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~ln--p~v~v~~~~~ 96 (456)
..||.+||+|-.|..+|+||+..|. .++++|.+.-....+.. .|-..++ .+.++- .++-+..+..
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~--------~G~~~~~----s~~e~~~~~dvvi~~l~~ 71 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGY-ELVVWNRTASKAEPLTK--------LGATVVE----NAIDAITPGGIVFSVLAD 71 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTC-EEEEC-------CTTTT--------TTCEECS----SGGGGCCTTCEEEECCSS
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHH--------cCCeEeC----CHHHHHhcCCceeeeccc
Confidence 4589999999999999999999997 58888854433332221 1211111 111221 2333222221
Q ss_pred Chhhhhc----CCcCCCCCCcEEEEc-CCChHHHHHHHHHHHHcCCeEEEEeeccc
Q 012768 97 YPEALIE----MNPPFFSQFTLVVAT-QLGEEKMIKLDRICREANVMLIFARSYGL 147 (456)
Q Consensus 97 ~~~~~~~----~~~~~~~~~dvVi~~-~~~~~~~~~l~~~~~~~~ip~i~~~~~G~ 147 (456)
+....+ .....+..-+++|.+ +.+......+.+.+.++++.|+.+...|.
T Consensus 72 -~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsGg 126 (297)
T 4gbj_A 72 -DAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFAR 126 (297)
T ss_dssp -HHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECC
T ss_pred -hhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCCC
Confidence 111100 001123344577754 55667788889999999999999887764
No 130
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=92.03 E-value=1.2 Score=43.20 Aligned_cols=39 Identities=28% Similarity=0.341 Sum_probs=28.3
Q ss_pred HHHHhcCcEEEEcC-ChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 14 QAALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 14 q~~L~~~~VlIiG~-gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
+..+...+|+|.|+ |.+|+.+++.|...|...++++|..
T Consensus 41 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 80 (357)
T 2x6t_A 41 GSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNL 80 (357)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred cccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecC
Confidence 34566789999996 8899999999999997778888754
No 131
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=91.99 E-value=0.26 Score=47.94 Aligned_cols=33 Identities=15% Similarity=0.152 Sum_probs=28.4
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
...+|.|||+|.+|+.++.+|+.+|. .++++|.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~-~V~~~~r 45 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGE-EVILWAR 45 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCC-eEEEEeC
Confidence 35789999999999999999999995 6888763
No 132
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=91.98 E-value=1.3 Score=42.52 Aligned_cols=37 Identities=22% Similarity=0.248 Sum_probs=31.1
Q ss_pred HHHhcCcEEEEcC-ChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 15 AALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 15 ~~L~~~~VlIiG~-gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
+.+++.+|+|.|+ |++|..+++.|+..|. +++++|..
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~-~V~~~~r~ 53 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGH-EILVIDNF 53 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTC-EEEEEECC
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 3567789999995 8899999999999994 68888753
No 133
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=91.95 E-value=0.38 Score=47.27 Aligned_cols=76 Identities=12% Similarity=0.109 Sum_probs=51.5
Q ss_pred hcCcEEEEcCChhHHHHHHHHHH-cCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEec
Q 012768 18 EKASVCLLNCGPTGSETLKNLVL-GGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 96 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl-~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~ 96 (456)
...+|+|||+|+.|..++..|.. .++.+++++|.+ ..|++.+++.+.+. +.+.+....
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~-------------------~~~a~~la~~~~~~-~g~~~~~~~- 186 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTD-------------------PLATAKLIANLKEY-SGLTIRRAS- 186 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSS-------------------HHHHHHHHHHHTTC-TTCEEEECS-
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCC-------------------HHHHHHHHHHHHhc-cCceEEEeC-
Confidence 46789999999999999999864 588999998732 23666666665432 344444332
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCCC
Q 012768 97 YPEALIEMNPPFFSQFTLVVATQLG 121 (456)
Q Consensus 97 ~~~~~~~~~~~~~~~~dvVi~~~~~ 121 (456)
+. .+.+.++|+||.|+.+
T Consensus 187 ~~-------~eav~~aDiVi~aTps 204 (350)
T 1x7d_A 187 SV-------AEAVKGVDIITTVTAD 204 (350)
T ss_dssp SH-------HHHHTTCSEEEECCCC
T ss_pred CH-------HHHHhcCCEEEEeccC
Confidence 21 1234578999988765
No 134
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=91.60 E-value=0.44 Score=45.05 Aligned_cols=34 Identities=12% Similarity=0.088 Sum_probs=28.1
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCC-CcEEEEeC
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGI-GSITVIDG 51 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv-~~itlvD~ 51 (456)
...+|.|||+|.+|+.+++.|...|. ..++++|.
T Consensus 5 ~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~ 39 (290)
T 3b1f_A 5 EEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNR 39 (290)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred ccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcC
Confidence 34689999999999999999999974 35777763
No 135
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=91.60 E-value=0.6 Score=47.96 Aligned_cols=33 Identities=15% Similarity=0.281 Sum_probs=29.3
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
.+|.|||+|.+|+.++.+|+..|. .++++|.+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~-~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 479999999999999999999997 589998643
No 136
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.58 E-value=0.16 Score=48.05 Aligned_cols=32 Identities=16% Similarity=0.223 Sum_probs=30.0
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
.++|+|+|+||.|..++..|...| .++++++.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G-~~v~V~nR 149 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG-LQVSVLNR 149 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeC
Confidence 789999999999999999999999 99999863
No 137
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=91.54 E-value=0.55 Score=44.60 Aligned_cols=29 Identities=28% Similarity=0.407 Sum_probs=23.6
Q ss_pred CcEEEEc-CChhHHHHHHHHHHcCCCcEEEEe
Q 012768 20 ASVCLLN-CGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 20 ~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD 50 (456)
++|+|.| .|.+|..+++.|...| .++.++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~ 31 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVID 31 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEEC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEEE
Confidence 3799999 5889999999999999 555554
No 138
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.45 E-value=0.15 Score=48.09 Aligned_cols=33 Identities=15% Similarity=0.193 Sum_probs=30.2
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEe
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD 50 (456)
+..++|+|+|+||+|..++..|...| .+++++|
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G-~~V~v~~ 149 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLD-CAVTITN 149 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEEC
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcC-CEEEEEE
Confidence 46789999999999999999999999 7899986
No 139
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=91.38 E-value=0.14 Score=49.72 Aligned_cols=36 Identities=17% Similarity=0.274 Sum_probs=30.6
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
....+|.|||+|.+|..++++|+..|. .++++|.+.
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~ 64 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTP 64 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCH
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCH
Confidence 344589999999999999999999996 588888543
No 140
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=91.38 E-value=0.6 Score=45.18 Aligned_cols=35 Identities=17% Similarity=0.175 Sum_probs=29.5
Q ss_pred HHhcCcEEEEcC-ChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 16 ALEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 16 ~L~~~~VlIiG~-gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
.+...+|+|.|+ |.+|+.+++.|...|. +++++|.
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r 59 (352)
T 1sb8_A 24 PAQPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDN 59 (352)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred CccCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 366788999996 8899999999999995 6777764
No 141
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=91.38 E-value=0.71 Score=44.71 Aligned_cols=73 Identities=18% Similarity=0.268 Sum_probs=51.1
Q ss_pred hcCcEEEEcCChhHHHHHHHHHH-cCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEec
Q 012768 18 EKASVCLLNCGPTGSETLKNLVL-GGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 96 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl-~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~ 96 (456)
...+|+|||+|+.|...++.|.. .++..++++|.+ ..|++.+++.+.... +.+. ..
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-------------------~~~a~~la~~~~~~~--~~~~-~~- 180 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVR-------------------EKAAKKFVSYCEDRG--ISAS-VQ- 180 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSS-------------------HHHHHHHHHHHHHTT--CCEE-EC-
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCC-------------------HHHHHHHHHHHHhcC--ceEE-EC-
Confidence 45789999999999999999987 478999998732 247777777766432 3333 22
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCCC
Q 012768 97 YPEALIEMNPPFFSQFTLVVATQLG 121 (456)
Q Consensus 97 ~~~~~~~~~~~~~~~~dvVi~~~~~ 121 (456)
+. .+.+ ++|+|+.|+.+
T Consensus 181 ~~-------~e~v-~aDvVi~aTp~ 197 (322)
T 1omo_A 181 PA-------EEAS-RCDVLVTTTPS 197 (322)
T ss_dssp CH-------HHHT-SSSEEEECCCC
T ss_pred CH-------HHHh-CCCEEEEeeCC
Confidence 22 1235 78999988764
No 142
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=91.34 E-value=0.31 Score=45.46 Aligned_cols=31 Identities=16% Similarity=0.338 Sum_probs=24.3
Q ss_pred cEEEEcC-ChhHHHHHHHHHHc-CCCcEEEEeC
Q 012768 21 SVCLLNC-GPTGSETLKNLVLG-GIGSITVIDG 51 (456)
Q Consensus 21 ~VlIiG~-gglG~eiaknLvl~-Gv~~itlvD~ 51 (456)
+|.|+|+ |.+|..+++.+... |..=+.++|.
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~ 34 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDA 34 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEcc
Confidence 7999997 99999999998755 7654456663
No 143
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=91.32 E-value=0.48 Score=43.22 Aligned_cols=105 Identities=15% Similarity=0.094 Sum_probs=58.0
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEe
Q 012768 17 LEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIE 95 (456)
Q Consensus 17 L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~ 95 (456)
+..++|+|.| .|++|..+++.|+..|--++++++.+.-....+. .+.+. .+.
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-------------------------~~~~~--~~~ 73 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-------------------------PTNSQ--IIM 73 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-------------------------CTTEE--EEE
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-------------------------cCCcE--EEE
Confidence 3346799999 6899999999999999447888775432211110 01222 222
Q ss_pred cChhhhhcCCcCCCCCCcEEEEcCCChH---HHHHHHHHHHHcCC-eEEEEeecccee
Q 012768 96 EYPEALIEMNPPFFSQFTLVVATQLGEE---KMIKLDRICREANV-MLIFARSYGLTG 149 (456)
Q Consensus 96 ~~~~~~~~~~~~~~~~~dvVi~~~~~~~---~~~~l~~~~~~~~i-p~i~~~~~G~~G 149 (456)
.+..+.. .-...+++.|+||.+..... ....+.+.+++.++ .+|..++.+.++
T Consensus 74 ~Dl~d~~-~~~~~~~~~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~ 130 (236)
T 3qvo_A 74 GDVLNHA-ALKQAMQGQDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYD 130 (236)
T ss_dssp CCTTCHH-HHHHHHTTCSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCCC--
T ss_pred ecCCCHH-HHHHHhcCCCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEecceecC
Confidence 2211100 00123557889885543211 23456667777775 477777766554
No 144
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=91.13 E-value=0.58 Score=45.29 Aligned_cols=103 Identities=14% Similarity=0.069 Sum_probs=59.2
Q ss_pred HhcCcEEEEcC-ChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEe
Q 012768 17 LEKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIE 95 (456)
Q Consensus 17 L~~~~VlIiG~-gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~ 95 (456)
+...+|+|.|+ |.+|..+++.|...| .++++++.+.-. ...|+..+ +.+. .+.+++...+
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~---------------~~~~~~~~-~~l~--~~~v~~~~~D 68 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAH-RPTYILARPGPR---------------SPSKAKIF-KALE--DKGAIIVYGL 68 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECSSCC---------------CHHHHHHH-HHHH--HTTCEEEECC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECCCCC---------------ChhHHHHH-HHHH--hCCcEEEEee
Confidence 45679999997 889999999999999 567777643200 01122211 1222 2345543322
Q ss_pred cChhhhhcCCcCCCC--CCcEEEEcCC--ChHHHHHHHHHHHHcC-CeEEE
Q 012768 96 EYPEALIEMNPPFFS--QFTLVVATQL--GEEKMIKLDRICREAN-VMLIF 141 (456)
Q Consensus 96 ~~~~~~~~~~~~~~~--~~dvVi~~~~--~~~~~~~l~~~~~~~~-ip~i~ 141 (456)
- .+.. .-...++ ++|+||.+.. +......+.+.|++.+ ++.+.
T Consensus 69 l--~d~~-~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 69 I--NEQE-AMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFL 116 (346)
T ss_dssp T--TCHH-HHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEE
T ss_pred c--CCHH-HHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEe
Confidence 1 1100 0122355 8999996653 3445667888888888 76554
No 145
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.13 E-value=0.84 Score=46.56 Aligned_cols=97 Identities=13% Similarity=0.150 Sum_probs=65.2
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecCh
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYP 98 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~~ 98 (456)
..+|+|+|.|-+|..+|+.|-. + .++++++.|. .|++.++ +..|.+.+-.-+...
T Consensus 235 ~~~v~I~GgG~ig~~lA~~L~~-~-~~v~iIE~d~-------------------~r~~~la----~~l~~~~Vi~GD~td 289 (461)
T 4g65_A 235 YRRIMIVGGGNIGASLAKRLEQ-T-YSVKLIERNL-------------------QRAEKLS----EELENTIVFCGDAAD 289 (461)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT-T-SEEEEEESCH-------------------HHHHHHH----HHCTTSEEEESCTTC
T ss_pred ccEEEEEcchHHHHHHHHHhhh-c-CceEEEecCH-------------------HHHHHHH----HHCCCceEEeccccc
Confidence 5689999999999999999853 3 5788887443 3554444 444555433222111
Q ss_pred hhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEEE
Q 012768 99 EALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFA 142 (456)
Q Consensus 99 ~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~ 142 (456)
..+. ..+-+.++|++|+++.+.+.-....-++++.|++-+.+
T Consensus 290 ~~~L--~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 290 QELL--TEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp HHHH--HHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred hhhH--hhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 1111 12346689999998888787778888999999885555
No 146
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=91.12 E-value=0.75 Score=44.13 Aligned_cols=31 Identities=23% Similarity=0.405 Sum_probs=27.3
Q ss_pred cEEEEc-CChhHHHHHHHHHHcCCC-cEEEEeC
Q 012768 21 SVCLLN-CGPTGSETLKNLVLGGIG-SITVIDG 51 (456)
Q Consensus 21 ~VlIiG-~gglG~eiaknLvl~Gv~-~itlvD~ 51 (456)
||+|+| +|.+|..++..|+..|.. .++|+|.
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di 34 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDI 34 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECC
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcC
Confidence 799999 999999999999988864 4888884
No 147
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=91.11 E-value=1.1 Score=42.42 Aligned_cols=32 Identities=22% Similarity=0.379 Sum_probs=28.8
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.+|.|||+|.+|+.++++|...|. .++++|.+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC-eEEEEcCC
Confidence 589999999999999999999997 68888754
No 148
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=91.09 E-value=0.51 Score=45.53 Aligned_cols=32 Identities=19% Similarity=0.304 Sum_probs=26.2
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEE
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVI 49 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlv 49 (456)
....+|+|+|+|++|+.++..|+..|. .++++
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~ 48 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGH-EVILI 48 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTC-EEEEE
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCC-eEEEE
Confidence 456789999999999999999999995 56665
No 149
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=91.03 E-value=0.77 Score=47.00 Aligned_cols=33 Identities=12% Similarity=0.243 Sum_probs=29.5
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
..+|.|||+|.+|+.++.+|+..|. .++++|.+
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~-~V~v~dr~ 37 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGY-TVAIYNRT 37 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCC-EEEEEcCC
Confidence 4689999999999999999999997 58888854
No 150
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=90.98 E-value=0.61 Score=41.86 Aligned_cols=102 Identities=14% Similarity=0.101 Sum_probs=58.0
Q ss_pred CcEEEEc-CChhHHHHHHHHH-HcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecC
Q 012768 20 ASVCLLN-CGPTGSETLKNLV-LGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY 97 (456)
Q Consensus 20 ~~VlIiG-~gglG~eiaknLv-l~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~ 97 (456)
++|+|.| .|++|..+++.|+ ..|. ++++++.+.-. ++ +.+.+..+.+.+ +..+
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~------------------~~----~~~~~~~~~~~~--~~~D 60 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKT------------------RI----PPEIIDHERVTV--IEGS 60 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHH------------------HS----CHHHHTSTTEEE--EECC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccc------------------cc----hhhccCCCceEE--EECC
Confidence 3599999 6899999999999 8997 67777643210 11 111122344433 3222
Q ss_pred hhhhhcCCcCCCCCCcEEEEcCCC--hHHHHHHHHHHHHcCC-eEEEEeeccce
Q 012768 98 PEALIEMNPPFFSQFTLVVATQLG--EEKMIKLDRICREANV-MLIFARSYGLT 148 (456)
Q Consensus 98 ~~~~~~~~~~~~~~~dvVi~~~~~--~~~~~~l~~~~~~~~i-p~i~~~~~G~~ 148 (456)
..+.. .-...+++.|+||.+... .. ...+.+.+++.++ .+|..++.+.+
T Consensus 61 ~~d~~-~~~~~~~~~d~vv~~ag~~n~~-~~~~~~~~~~~~~~~iv~iSs~~~~ 112 (221)
T 3r6d_A 61 FQNPG-XLEQAVTNAEVVFVGAMESGSD-MASIVKALSRXNIRRVIGVSMAGLS 112 (221)
T ss_dssp TTCHH-HHHHHHTTCSEEEESCCCCHHH-HHHHHHHHHHTTCCEEEEEEETTTT
T ss_pred CCCHH-HHHHHHcCCCEEEEcCCCCChh-HHHHHHHHHhcCCCeEEEEeeceec
Confidence 11100 002235678999966532 23 4556667777765 46766666544
No 151
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=90.86 E-value=0.18 Score=50.63 Aligned_cols=35 Identities=26% Similarity=0.432 Sum_probs=32.5
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
+...+|+|+|+|++|..+++.|...|+++++++|.
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r 199 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANR 199 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECS
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 57899999999999999999999999999999873
No 152
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=90.74 E-value=0.15 Score=48.31 Aligned_cols=34 Identities=18% Similarity=0.216 Sum_probs=30.9
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
++.++|+|+|+||+|..++..|...| .+++++|.
T Consensus 117 ~~~~~vlvlGaGg~g~a~a~~L~~~G-~~v~v~~R 150 (272)
T 1p77_A 117 RPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANR 150 (272)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEES
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEEC
Confidence 46789999999999999999999999 89999873
No 153
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=90.71 E-value=1.2 Score=40.83 Aligned_cols=32 Identities=22% Similarity=0.235 Sum_probs=27.4
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 21 SVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 21 ~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
+|.|||+|.+|..++++|...|+.-..++|.+
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~ 33 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVR 33 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecC
Confidence 69999999999999999998887544677754
No 154
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=90.68 E-value=0.52 Score=44.52 Aligned_cols=102 Identities=17% Similarity=0.166 Sum_probs=57.7
Q ss_pred cCcEEEEcC-ChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCc-chHHHHHHHHHHhCCCCEEEEEec
Q 012768 19 KASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGE-SKAKSVCAFLQELNDAVKAKFIEE 96 (456)
Q Consensus 19 ~~~VlIiG~-gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~-~Ka~~~~~~l~~lnp~v~v~~~~~ 96 (456)
..+|+|.|+ |.+|..+++.|+..| .++++++.+.-. .. .. .|++.+ +.+. .+.+++...+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~----~~---------~~~~~~~~~-~~l~--~~~v~~v~~D~ 64 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAG-NPTYALVRKTIT----AA---------NPETKEELI-DNYQ--SLGVILLEGDI 64 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHT-CCEEEEECCSCC----SS---------CHHHHHHHH-HHHH--HTTCEEEECCT
T ss_pred CcEEEEECCCchHHHHHHHHHHhCC-CcEEEEECCCcc----cC---------ChHHHHHHH-HHHH--hCCCEEEEeCC
Confidence 357999995 889999999999999 467776543200 00 00 133222 1222 24455433221
Q ss_pred C-hhhhhcCCcCCCCCCcEEEEcCCC--hHHHHHHHHHHHHcC-CeEEE
Q 012768 97 Y-PEALIEMNPPFFSQFTLVVATQLG--EEKMIKLDRICREAN-VMLIF 141 (456)
Q Consensus 97 ~-~~~~~~~~~~~~~~~dvVi~~~~~--~~~~~~l~~~~~~~~-ip~i~ 141 (456)
. ++.+ ...+++.|+||.+... ......+.+.|++.+ ++-+.
T Consensus 65 ~d~~~l----~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 109 (307)
T 2gas_A 65 NDHETL----VKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF 109 (307)
T ss_dssp TCHHHH----HHHHTTCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred CCHHHH----HHHHhCCCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence 1 1111 2345689999976532 344566777888877 65443
No 155
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=90.68 E-value=0.24 Score=42.99 Aligned_cols=33 Identities=27% Similarity=0.507 Sum_probs=29.6
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
.+|+|||.|..|.++|..|.+.|. +++++|...
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~-~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGL-KVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-CEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence 379999999999999999999997 699999654
No 156
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=90.64 E-value=0.24 Score=45.93 Aligned_cols=39 Identities=15% Similarity=0.188 Sum_probs=30.7
Q ss_pred HHHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 14 QAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 14 q~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
...+...+|.|||+|.+|+.+|++|+..|. .++++|.+.
T Consensus 14 ~~~~~~~kIgiIG~G~mG~alA~~L~~~G~-~V~~~~r~~ 52 (245)
T 3dtt_A 14 NLYFQGMKIAVLGTGTVGRTMAGALADLGH-EVTIGTRDP 52 (245)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred ccccCCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCh
Confidence 357889999999999999999999999996 688888543
No 157
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=90.58 E-value=0.36 Score=45.68 Aligned_cols=101 Identities=15% Similarity=0.172 Sum_probs=56.8
Q ss_pred cCcEEEEcC-ChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHh-CCCCEEEEEec
Q 012768 19 KASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQEL-NDAVKAKFIEE 96 (456)
Q Consensus 19 ~~~VlIiG~-gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~l-np~v~v~~~~~ 96 (456)
..+|+|.|+ |.+|..+++.|...| .++++++.+.-.. + ...|++ .+.++ .+.+++...+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~----~---------~~~~~~----~~~~l~~~~v~~v~~D~ 65 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLG-HPTFLLVRESTAS----S---------NSEKAQ----LLESFKASGANIVHGSI 65 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCCCCTT----T---------THHHHH----HHHHHHTTTCEEECCCT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC-CCEEEEECCcccc----c---------CHHHHH----HHHHHHhCCCEEEEecc
Confidence 367999996 889999999999999 4677765332100 0 011222 22222 34555432221
Q ss_pred C-hhhhhcCCcCCCCCCcEEEEcCCC--hHHHHHHHHHHHHcC-CeEEE
Q 012768 97 Y-PEALIEMNPPFFSQFTLVVATQLG--EEKMIKLDRICREAN-VMLIF 141 (456)
Q Consensus 97 ~-~~~~~~~~~~~~~~~dvVi~~~~~--~~~~~~l~~~~~~~~-ip~i~ 141 (456)
. ++.+ ...++++|+||.+... ......+.+.|++.+ ++-+.
T Consensus 66 ~d~~~l----~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (308)
T 1qyc_A 66 DDHASL----VEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFF 110 (308)
T ss_dssp TCHHHH----HHHHHTCSEEEECCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred CCHHHH----HHHHcCCCEEEECCcchhhhhHHHHHHHHHhcCCCceEe
Confidence 1 1111 2235578999976543 233456777888877 65443
No 158
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=90.56 E-value=1.5 Score=40.85 Aligned_cols=97 Identities=16% Similarity=0.202 Sum_probs=56.6
Q ss_pred cEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecC-h
Q 012768 21 SVCLLN-CGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY-P 98 (456)
Q Consensus 21 ~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~-~ 98 (456)
+|+|.| .|.+|+.+++.|...+-.++++++.+.-....+ ..+.+++...+.. +
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-------------------------~~~~v~~~~~D~~d~ 56 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-------------------------WRGKVSVRQLDYFNQ 56 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-------------------------GBTTBEEEECCTTCH
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-------------------------hhCCCEEEEcCCCCH
Confidence 699999 588999999999987445677776443211110 1123443322211 1
Q ss_pred hhhhcCCcCCCCCCcEEEEcCCC-------hHHHHHHHHHHHHcCC-eEEEEeecc
Q 012768 99 EALIEMNPPFFSQFTLVVATQLG-------EEKMIKLDRICREANV-MLIFARSYG 146 (456)
Q Consensus 99 ~~~~~~~~~~~~~~dvVi~~~~~-------~~~~~~l~~~~~~~~i-p~i~~~~~G 146 (456)
+.+ ...++++|+||.+... ......+.+.|++.++ .+|..++.|
T Consensus 57 ~~l----~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~ 108 (289)
T 3e48_A 57 ESM----VEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA 108 (289)
T ss_dssp HHH----HHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred HHH----HHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence 111 2346688999865432 1234566778888886 477776644
No 159
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=90.53 E-value=0.61 Score=43.32 Aligned_cols=29 Identities=14% Similarity=0.189 Sum_probs=25.5
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCCcEEEEe
Q 012768 21 SVCLLNCGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 21 ~VlIiG~gglG~eiaknLvl~Gv~~itlvD 50 (456)
+|.|||+|.+|+.++++|...|. .++++|
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~-~V~~~~ 30 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSL 30 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTC-EEEECC
T ss_pred eEEEEechHHHHHHHHHHHHCCC-eEEEeC
Confidence 69999999999999999999997 566654
No 160
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=90.49 E-value=0.061 Score=51.62 Aligned_cols=44 Identities=14% Similarity=0.154 Sum_probs=35.7
Q ss_pred cCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 9 WGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 9 wG~~~q~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
|.......|..++|.|+|+|.+|..+|+.|...|. +++.+|...
T Consensus 112 w~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~ 155 (290)
T 3gvx_A 112 FRQSPTTLLYGKALGILGYGGIGRRVAHLAKAFGM-RVIAYTRSS 155 (290)
T ss_dssp CCCCCCCCCTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSC
T ss_pred cccCCceeeecchheeeccCchhHHHHHHHHhhCc-EEEEEeccc
Confidence 44333345889999999999999999999999998 588888643
No 161
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=90.39 E-value=0.22 Score=47.90 Aligned_cols=35 Identities=17% Similarity=0.254 Sum_probs=30.4
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
...+|.|||+|.+|..++++|...|. .++++|.+.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 45689999999999999999999997 688888543
No 162
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=90.19 E-value=1.4 Score=43.07 Aligned_cols=37 Identities=27% Similarity=0.457 Sum_probs=30.5
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 16 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 16 ~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.++..+|+|.| .|.+|..+++.|...|..+++++|..
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 66 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNL 66 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECC
Confidence 46667899999 48899999999999995578887643
No 163
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=90.14 E-value=1.3 Score=41.48 Aligned_cols=36 Identities=17% Similarity=0.172 Sum_probs=27.8
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 16 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 16 ~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
+-..++|+|.| .|.+|+.+++.|...|. +++++|..
T Consensus 9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 45 (292)
T 1vl0_A 9 HHHHMKILITGANGQLGREIQKQLKGKNV-EVIPTDVQ 45 (292)
T ss_dssp ---CEEEEEESTTSHHHHHHHHHHTTSSE-EEEEECTT
T ss_pred ccccceEEEECCCChHHHHHHHHHHhCCC-eEEeccCc
Confidence 34567899998 58899999999999994 67777754
No 164
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=90.11 E-value=0.26 Score=50.69 Aligned_cols=32 Identities=19% Similarity=0.333 Sum_probs=28.7
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 21 SVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 21 ~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
+|.|||+|.+|+.++.+|+..|. .++++|.+.
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~-~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 79999999999999999999997 589998643
No 165
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=90.09 E-value=0.87 Score=43.64 Aligned_cols=32 Identities=25% Similarity=0.427 Sum_probs=26.7
Q ss_pred cCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 19 KASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 19 ~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
+.+|+|.| .|++|..+++.|+..|. +++++|.
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGY-DVVIADN 37 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEec
Confidence 46899998 68899999999999996 4777663
No 166
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=90.05 E-value=2.2 Score=41.18 Aligned_cols=37 Identities=14% Similarity=-0.003 Sum_probs=31.1
Q ss_pred HHHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 15 AALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 15 ~~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
..+++.+|+|.| .|.+|+.+++.|...|. +++++|..
T Consensus 5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 42 (357)
T 1rkx_A 5 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLT 42 (357)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred hhhCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCC
Confidence 457788999999 68899999999999995 68887753
No 167
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=90.04 E-value=0.26 Score=47.12 Aligned_cols=36 Identities=19% Similarity=0.292 Sum_probs=32.2
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.|..++|+|+|+|.+|..+++.|...|. +++++|..
T Consensus 152 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~ 187 (293)
T 3d4o_A 152 TIHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARE 187 (293)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECC
Confidence 4778999999999999999999999998 79988843
No 168
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=90.02 E-value=1 Score=46.96 Aligned_cols=91 Identities=16% Similarity=0.133 Sum_probs=60.1
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecChh
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYPE 99 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~~~ 99 (456)
.+|+|+|+|-+|..+|+.|...|.. ++++|.|.-....+. +.+.+... +.+
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~-v~vid~d~~~~~~~~--------------------------~~i~gD~t--~~~ 399 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVP-FILIDRQESPVCNDH--------------------------VVVYGDAT--VGQ 399 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC-EEEEESSCCSSCCSS--------------------------CEEESCSS--SST
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCC-EEEEECChHHHhhcC--------------------------CEEEeCCC--CHH
Confidence 7999999999999999999999975 899997653322211 11111110 111
Q ss_pred hhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCe-EEEE
Q 012768 100 ALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVM-LIFA 142 (456)
Q Consensus 100 ~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip-~i~~ 142 (456)
.+. ..-+.++|.+|++..+......+...+++.+.+ -+.+
T Consensus 400 ~L~---~agi~~ad~vi~~~~~d~~ni~~~~~ak~l~~~~~iia 440 (565)
T 4gx0_A 400 TLR---QAGIDRASGIIVTTNDDSTNIFLTLACRHLHSHIRIVA 440 (565)
T ss_dssp HHH---HHTTTSCSEEEECCSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred HHH---hcCccccCEEEEECCCchHHHHHHHHHHHHCCCCEEEE
Confidence 111 123568999998887777777777888888764 3444
No 169
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=89.95 E-value=0.48 Score=44.23 Aligned_cols=58 Identities=10% Similarity=0.097 Sum_probs=41.5
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEE
Q 012768 16 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKF 93 (456)
Q Consensus 16 ~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~ 93 (456)
.|++++|+|.| .||+|.++++.|+..|. ++.++|.+ ..+.+.+.+.+.+..+...+..
T Consensus 7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~ 65 (267)
T 3t4x_A 7 QLKGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRR-------------------EENVNETIKEIRAQYPDAILQP 65 (267)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESS-------------------HHHHHHHHHHHHHHCTTCEEEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhhCCCceEEE
Confidence 35677888888 58899999999999997 47777632 2355566667777766555444
No 170
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=89.95 E-value=1.6 Score=44.87 Aligned_cols=33 Identities=18% Similarity=0.245 Sum_probs=27.6
Q ss_pred cCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 19 KASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
..+|+|.| .|.+|+.+++.|...|. +++.++..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~-~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGH-EVIQLVRK 180 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 35899999 68899999999999997 67777643
No 171
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=89.92 E-value=0.41 Score=46.02 Aligned_cols=31 Identities=19% Similarity=0.218 Sum_probs=25.8
Q ss_pred cEEEEcC-ChhHHHHHHHHHHc-CCCcEEEEeCC
Q 012768 21 SVCLLNC-GPTGSETLKNLVLG-GIGSITVIDGS 52 (456)
Q Consensus 21 ~VlIiG~-gglG~eiaknLvl~-Gv~~itlvD~d 52 (456)
+|+|.|+ |.+|+.+++.|... |. +++++|..
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~ 34 (345)
T 2bll_A 2 RVLILGVNGFIGNHLTERLLREDHY-EVYGLDIG 34 (345)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTC-EEEEEESC
T ss_pred eEEEECCCcHHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 6999996 88999999999998 64 67777753
No 172
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=89.82 E-value=0.079 Score=51.44 Aligned_cols=44 Identities=20% Similarity=0.333 Sum_probs=35.8
Q ss_pred cCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 9 WGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 9 wG~~~q~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
|.......|..++|.|||+|.+|..+|+.|...|. +++.+|...
T Consensus 129 W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~~G~-~V~~~dr~~ 172 (315)
T 3pp8_A 129 WKPLPEYTREEFSVGIMGAGVLGAKVAESLQAWGF-PLRCWSRSR 172 (315)
T ss_dssp CCCCCCCCSTTCCEEEECCSHHHHHHHHHHHTTTC-CEEEEESSC
T ss_pred cCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCc
Confidence 54333356889999999999999999999999998 588887543
No 173
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=89.60 E-value=1.3 Score=43.47 Aligned_cols=33 Identities=15% Similarity=0.159 Sum_probs=27.9
Q ss_pred cCcEEEEcC-ChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 19 KASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~-gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
..+|+|.|+ |.+|..+++.|...|. +++++|.+
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 62 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEGH-YVIASDWK 62 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCeEEEECCccHHHHHHHHHHHHCCC-eEEEEECC
Confidence 468999996 8899999999999995 68888754
No 174
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=89.60 E-value=1.7 Score=38.42 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=28.4
Q ss_pred cCcEEEEc-CChhHHHHHHHHHHcCC-CcEEEEeCC
Q 012768 19 KASVCLLN-CGPTGSETLKNLVLGGI-GSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG-~gglG~eiaknLvl~Gv-~~itlvD~d 52 (456)
..+|+|.| .|++|.++++.|...|. .++++++.+
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~ 40 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARK 40 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSS
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 46899999 68899999999999997 478777643
No 175
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=89.58 E-value=0.28 Score=46.92 Aligned_cols=36 Identities=22% Similarity=0.312 Sum_probs=32.2
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.|..++|+|+|+|.+|..+++.|...|. +++++|..
T Consensus 154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~ 189 (300)
T 2rir_A 154 TIHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARS 189 (300)
T ss_dssp CSTTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECC
Confidence 4778999999999999999999999998 79998843
No 176
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=89.55 E-value=0.45 Score=45.99 Aligned_cols=72 Identities=19% Similarity=0.230 Sum_probs=48.6
Q ss_pred cCcEEEEcCChhHHHHHHHHHH-cCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecC
Q 012768 19 KASVCLLNCGPTGSETLKNLVL-GGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY 97 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl-~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~ 97 (456)
..+|+|||+|..|...++.|.. .++.+++++|.+ |++..++.+.+.. .+.+... +
T Consensus 121 ~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~---------------------~a~~la~~l~~~~-g~~~~~~--~ 176 (313)
T 3hdj_A 121 SSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY---------------------ASPEILERIGRRC-GVPARMA--A 176 (313)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT---------------------CCHHHHHHHHHHH-TSCEEEC--C
T ss_pred CcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc---------------------HHHHHHHHHHHhc-CCeEEEe--C
Confidence 5789999999999999999986 478999998743 3344445554321 2444333 2
Q ss_pred hhhhhcCCcCCCCCCcEEEEcCCC
Q 012768 98 PEALIEMNPPFFSQFTLVVATQLG 121 (456)
Q Consensus 98 ~~~~~~~~~~~~~~~dvVi~~~~~ 121 (456)
... .+.++|+||.|+.+
T Consensus 177 ~~e-------av~~aDIVi~aT~s 193 (313)
T 3hdj_A 177 PAD-------IAAQADIVVTATRS 193 (313)
T ss_dssp HHH-------HHHHCSEEEECCCC
T ss_pred HHH-------HHhhCCEEEEccCC
Confidence 222 24478999988754
No 177
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=89.42 E-value=1.2 Score=42.20 Aligned_cols=32 Identities=13% Similarity=0.004 Sum_probs=26.9
Q ss_pred cCcEEEEcC-ChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 19 KASVCLLNC-GPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 19 ~~~VlIiG~-gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
..+|+|.|+ |.+|..+++.|...| .+++++|.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNN-WHAVGCGF 34 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCC-CeEEEEcc
Confidence 468999996 889999999999999 46888774
No 178
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=89.42 E-value=0.3 Score=47.98 Aligned_cols=33 Identities=21% Similarity=0.339 Sum_probs=29.7
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
+.||+|||+|..|..+|-.|.+.|+ +++|+|.+
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G~-~v~v~Er~ 33 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHGI-KVTIYERN 33 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEecC
Confidence 3589999999999999999999999 49999854
No 179
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=89.42 E-value=1.5 Score=44.53 Aligned_cols=33 Identities=15% Similarity=0.262 Sum_probs=29.6
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
.+|.|||+|.+|..+|.+|+..|. .++++|.+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~-~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGA-NVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCC-EEEEEECCH
Confidence 589999999999999999999996 688998654
No 180
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=89.39 E-value=1.6 Score=44.37 Aligned_cols=94 Identities=14% Similarity=0.151 Sum_probs=55.9
Q ss_pred cCcEEEEcCChh-HHHHHHHHHH--cCC--CcEEEEeCCcccccCCCccccccccccCcchHHHHH---HHH-HHhCCCC
Q 012768 19 KASVCLLNCGPT-GSETLKNLVL--GGI--GSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVC---AFL-QELNDAV 89 (456)
Q Consensus 19 ~~~VlIiG~ggl-G~eiaknLvl--~Gv--~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~---~~l-~~lnp~v 89 (456)
..+|.|||+|++ |..++..|+. .+. ..++|+|-+. |+.|++.+. +.+ ...+..+
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~-----------------~~e~~~~~~~~~~~~~~~~~~~~ 69 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPE-----------------GKEKLEIVGALAKRMVEKAGVPI 69 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGG-----------------GHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCC-----------------ChHHHHHHHHHHHHHHhhcCCCc
Confidence 468999999999 8888888887 565 6799998322 223444422 222 3445566
Q ss_pred EEEEEecChhhhhcCCcCCCCCCcEEEEcCCChH--HHHHHHHHHHHcCC
Q 012768 90 KAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEE--KMIKLDRICREANV 137 (456)
Q Consensus 90 ~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~--~~~~l~~~~~~~~i 137 (456)
++.... +. .+.++++|+||.+..... .+.+...+..++++
T Consensus 70 ~i~~t~-D~-------~eal~gAD~VVitagv~~~~~~~rd~~ip~~~g~ 111 (450)
T 1s6y_A 70 EIHLTL-DR-------RRALDGADFVTTQFRVGGLEARAKDERIPLKYGV 111 (450)
T ss_dssp EEEEES-CH-------HHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTC
T ss_pred EEEEeC-CH-------HHHhCCCCEEEEcCCCCCCcchhhhhhhhhhcCc
Confidence 666532 11 123568999998765422 23344444455554
No 181
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=89.33 E-value=0.63 Score=43.96 Aligned_cols=30 Identities=23% Similarity=0.299 Sum_probs=27.3
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEe
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD 50 (456)
.+|.|||+|.+|+.++++|...|. .++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGH-QLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTC-EEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCC-EEEEEc
Confidence 479999999999999999999996 688887
No 182
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=89.22 E-value=0.92 Score=46.04 Aligned_cols=36 Identities=28% Similarity=0.356 Sum_probs=31.4
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
+++++|+|+|.|+.|..+|+.|...|. .++..|...
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~-~V~~~D~~~ 42 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGA-IVTVNDGKP 42 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTC-EEEEEESSC
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEeCCc
Confidence 567899999999999999999999995 588888543
No 183
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=89.20 E-value=3.2 Score=34.70 Aligned_cols=39 Identities=21% Similarity=0.356 Sum_probs=27.7
Q ss_pred HHHHHHhcCcEEEEcC----ChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 12 QGQAALEKASVCLLNC----GPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 12 ~~q~~L~~~~VlIiG~----gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
+|-..++..+|.|||+ |.+|..+++||...|.. +.-+|+
T Consensus 7 ~~~~l~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~-V~~vnp 49 (138)
T 1y81_A 7 HGSNSKEFRKIALVGASKNPAKYGNIILKDLLSKGFE-VLPVNP 49 (138)
T ss_dssp -------CCEEEEETCCSCTTSHHHHHHHHHHHTTCE-EEEECT
T ss_pred ccccccCCCeEEEEeecCCCCCHHHHHHHHHHHCCCE-EEEeCC
Confidence 4556778899999999 99999999999999984 555553
No 184
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=89.13 E-value=0.38 Score=43.92 Aligned_cols=34 Identities=24% Similarity=0.332 Sum_probs=30.6
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
+...|+|||.|..|.++|..|.+.|. +++++|..
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~-~v~lie~~ 35 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGV-RVGLLTQS 35 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC-CEEEEecC
Confidence 45789999999999999999999998 58999875
No 185
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=89.08 E-value=1.8 Score=42.55 Aligned_cols=33 Identities=18% Similarity=0.245 Sum_probs=28.9
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
..+|.|||+|..|+.+|..|+..|. .++++|.+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~-~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQ-KVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTC-CEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCC-eEEEEeCC
Confidence 3589999999999999999999995 58888754
No 186
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=89.07 E-value=0.097 Score=51.03 Aligned_cols=44 Identities=16% Similarity=0.265 Sum_probs=36.1
Q ss_pred cCHHHHHHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 9 WGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 9 wG~~~q~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
|.......|..++|.|||+|.+|..+|+.|...|. +++.+|...
T Consensus 130 W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~ 173 (324)
T 3hg7_A 130 WQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHFGM-KVLGVSRSG 173 (324)
T ss_dssp CCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred CcCCCCcccccceEEEEEECHHHHHHHHHHHhCCC-EEEEEcCCh
Confidence 54333346889999999999999999999999998 588888654
No 187
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=89.00 E-value=1.2 Score=43.48 Aligned_cols=92 Identities=13% Similarity=0.053 Sum_probs=53.0
Q ss_pred HHhcCcEEEEcCChhHH-HHHHHHHHc-CCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEE
Q 012768 16 ALEKASVCLLNCGPTGS-ETLKNLVLG-GIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKF 93 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~-eiaknLvl~-Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~ 93 (456)
.++.-+|.|||+|.+|. ..+..|... |+.-+.++|.+. .|++.+++.. .+..
T Consensus 24 ~m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~-------------------~~~~~~a~~~-----g~~~-- 77 (350)
T 3rc1_A 24 NANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRW-------------------DRAKRFTERF-----GGEP-- 77 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSH-------------------HHHHHHHHHH-----CSEE--
T ss_pred CCCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCH-------------------HHHHHHHHHc-----CCCC--
Confidence 45667899999999998 789999876 443334555322 3444444333 2332
Q ss_pred EecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEE
Q 012768 94 IEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLI 140 (456)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i 140 (456)
. .+.+++.+. .+.|+|+.|+.+. ....+...|.+.|++++
T Consensus 78 ~-~~~~~ll~~-----~~~D~V~i~tp~~-~h~~~~~~al~aGk~Vl 117 (350)
T 3rc1_A 78 V-EGYPALLER-----DDVDAVYVPLPAV-LHAEWIDRALRAGKHVL 117 (350)
T ss_dssp E-ESHHHHHTC-----TTCSEEEECCCGG-GHHHHHHHHHHTTCEEE
T ss_pred c-CCHHHHhcC-----CCCCEEEECCCcH-HHHHHHHHHHHCCCcEE
Confidence 2 233333211 2578888877553 34455556677777643
No 188
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=88.95 E-value=0.23 Score=47.34 Aligned_cols=32 Identities=9% Similarity=0.256 Sum_probs=29.5
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEe
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD 50 (456)
++.++|+|+|+||+|..+++.|+..| +++++|
T Consensus 126 l~~k~vlV~GaGgiG~aia~~L~~~G--~V~v~~ 157 (287)
T 1nvt_A 126 VKDKNIVIYGAGGAARAVAFELAKDN--NIIIAN 157 (287)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHTSSS--EEEEEC
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCC--CEEEEE
Confidence 56789999999999999999999999 899986
No 189
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=88.95 E-value=1 Score=42.50 Aligned_cols=99 Identities=17% Similarity=0.118 Sum_probs=56.6
Q ss_pred cCcEEEEcC-ChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHh-CCCCEEEEEec
Q 012768 19 KASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQEL-NDAVKAKFIEE 96 (456)
Q Consensus 19 ~~~VlIiG~-gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~l-np~v~v~~~~~ 96 (456)
..+|+|.|+ |.+|..+++.|...| .++++++.+.-. ....|++ .+.++ .+.+++...+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~--------------~~~~~~~----~~~~~~~~~~~~~~~D~ 64 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLG-HPTYVLFRPEVV--------------SNIDKVQ----MLLYFKQLGAKLIEASL 64 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCSCCS--------------SCHHHHH----HHHHHHTTTCEEECCCS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC-CcEEEEECCCcc--------------cchhHHH----HHHHHHhCCeEEEeCCC
Confidence 368999995 889999999999999 467776533210 0001222 22222 34555432221
Q ss_pred C-hhhhhcCCcCCCCCCcEEEEcCC------ChHHHHHHHHHHHHcC-CeEE
Q 012768 97 Y-PEALIEMNPPFFSQFTLVVATQL------GEEKMIKLDRICREAN-VMLI 140 (456)
Q Consensus 97 ~-~~~~~~~~~~~~~~~dvVi~~~~------~~~~~~~l~~~~~~~~-ip~i 140 (456)
. ++.+ ...++++|+||.+.. +......+.+.|++.+ ++-+
T Consensus 65 ~d~~~l----~~~~~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~ 112 (313)
T 1qyd_A 65 DDHQRL----VDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRF 112 (313)
T ss_dssp SCHHHH----HHHHTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEE
T ss_pred CCHHHH----HHHHhCCCEEEECCccccchhhHHHHHHHHHHHHhcCCCceE
Confidence 1 1111 234568999996542 2334566778888887 6544
No 190
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=88.93 E-value=1.5 Score=42.93 Aligned_cols=94 Identities=18% Similarity=0.166 Sum_probs=52.1
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHH-H-cCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEE
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLV-L-GGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKF 93 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLv-l-~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~ 93 (456)
.++.-+|.|||+|.+|...+++|. . .|+.-+.++|.+ ..|++.+++.+ +..+. .
T Consensus 20 ~m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~-------------------~~~~~~~a~~~---g~~~~--~ 75 (357)
T 3ec7_A 20 QGMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIV-------------------AGRAQAALDKY---AIEAK--D 75 (357)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSS-------------------TTHHHHHHHHH---TCCCE--E
T ss_pred CCCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCC-------------------HHHHHHHHHHh---CCCCe--e
Confidence 345668999999999999999998 4 455444456532 23554444332 21122 2
Q ss_pred EecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEE
Q 012768 94 IEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLI 140 (456)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i 140 (456)
.. +.+++.+. .+.|+|+.|+.+ .....+...|.+.|++++
T Consensus 76 ~~-~~~~ll~~-----~~~D~V~i~tp~-~~h~~~~~~al~aGk~Vl 115 (357)
T 3ec7_A 76 YN-DYHDLIND-----KDVEVVIITASN-EAHADVAVAALNANKYVF 115 (357)
T ss_dssp ES-SHHHHHHC-----TTCCEEEECSCG-GGHHHHHHHHHHTTCEEE
T ss_pred eC-CHHHHhcC-----CCCCEEEEcCCc-HHHHHHHHHHHHCCCCEE
Confidence 22 22233211 146888877654 333445556666676643
No 191
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=88.73 E-value=0.37 Score=48.74 Aligned_cols=40 Identities=15% Similarity=0.374 Sum_probs=36.4
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHcCC--CcEEEEeCCcc
Q 012768 15 AALEKASVCLLNCGPTGSETLKNLVLGGI--GSITVIDGSKV 54 (456)
Q Consensus 15 ~~L~~~~VlIiG~gglG~eiaknLvl~Gv--~~itlvD~d~v 54 (456)
++|++.+|++.|+|+.|.-+++.|+..|+ ++|.++|..-+
T Consensus 215 k~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gl 256 (487)
T 3nv9_A 215 KDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGS 256 (487)
T ss_dssp CCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEE
T ss_pred CChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEecccc
Confidence 46899999999999999999999999999 89999997643
No 192
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=88.73 E-value=1.4 Score=42.30 Aligned_cols=31 Identities=23% Similarity=0.302 Sum_probs=27.2
Q ss_pred cEEEEcC-ChhHHHHHHHHHHcCC-CcEEEEeC
Q 012768 21 SVCLLNC-GPTGSETLKNLVLGGI-GSITVIDG 51 (456)
Q Consensus 21 ~VlIiG~-gglG~eiaknLvl~Gv-~~itlvD~ 51 (456)
||+|+|+ |.+|+.++..|+..|. ..+.++|.
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di 34 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGR 34 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEEC
T ss_pred EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcC
Confidence 7999998 9999999999998886 44888883
No 193
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=88.66 E-value=0.28 Score=48.53 Aligned_cols=37 Identities=19% Similarity=0.229 Sum_probs=32.7
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.|..++|.|||+|.+|..+|+.|...|..++..+|..
T Consensus 161 ~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~ 197 (364)
T 2j6i_A 161 DIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQ 197 (364)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSS
T ss_pred cCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCC
Confidence 5889999999999999999999999997668888743
No 194
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=88.51 E-value=1 Score=43.20 Aligned_cols=36 Identities=25% Similarity=0.366 Sum_probs=28.6
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 16 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 16 ~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.+...+|+|.| .|++|..+++.|+..| .+++++|..
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~ 54 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERG-DKVVGIDNF 54 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEECC
Confidence 45667899998 6889999999999999 578888754
No 195
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=88.48 E-value=1 Score=43.28 Aligned_cols=34 Identities=18% Similarity=0.280 Sum_probs=29.5
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCC-cEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIG-SITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~-~itlvD~d 52 (456)
..+|.|+|+|.+|+-++..|+..|.. .++|+|-+
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~ 48 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLS 48 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 36899999999999999999999964 59999843
No 196
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=88.47 E-value=0.52 Score=46.00 Aligned_cols=36 Identities=22% Similarity=0.317 Sum_probs=31.6
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 15 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 15 ~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
..|+..+|.|||+|.+|..++++|...|. +++++|.
T Consensus 12 ~~l~~~~I~IIG~G~mG~alA~~L~~~G~-~V~~~~~ 47 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGHAHACNLKDSGV-DVTVGLR 47 (338)
T ss_dssp HHHHTSCEEEECCSHHHHHHHHHHHHTTC-CEEEECC
T ss_pred chhcCCEEEEECchHHHHHHHHHHHHCcC-EEEEEEC
Confidence 46788899999999999999999999997 5777764
No 197
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=88.45 E-value=0.4 Score=46.59 Aligned_cols=32 Identities=25% Similarity=0.488 Sum_probs=28.7
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
..+|+|+|+|++|+.++..|..+|. .++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~-~V~~~~r 34 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGE-AINVLAR 34 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTC-CEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 4689999999999999999999996 6888873
No 198
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=88.40 E-value=0.78 Score=43.68 Aligned_cols=102 Identities=10% Similarity=0.008 Sum_probs=57.1
Q ss_pred cCcEEEEcC-ChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecC
Q 012768 19 KASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY 97 (456)
Q Consensus 19 ~~~VlIiG~-gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~ 97 (456)
..+|+|.|+ |.+|..+++.|...| .++++++.+.-+ . -...+++.+. .+. .+.+++...+..
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~-----~--------~~~~~~~~l~-~~~--~~~v~~v~~D~~ 66 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFS-HPTFIYARPLTP-----D--------STPSSVQLRE-EFR--SMGVTIIEGEME 66 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTT-CCEEEEECCCCT-----T--------CCHHHHHHHH-HHH--HTTCEEEECCTT
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCC-CcEEEEECCccc-----c--------cChHHHHHHH-Hhh--cCCcEEEEecCC
Confidence 357999995 889999999999999 467777643100 0 0001222221 122 234554332211
Q ss_pred -hhhhhcCCcCCCCCCcEEEEcCCC--hHHHHHHHHHHHHcC-CeEEE
Q 012768 98 -PEALIEMNPPFFSQFTLVVATQLG--EEKMIKLDRICREAN-VMLIF 141 (456)
Q Consensus 98 -~~~~~~~~~~~~~~~dvVi~~~~~--~~~~~~l~~~~~~~~-ip~i~ 141 (456)
++.+ ...+++.|+||.+... ......+.+.|.+.+ ++-+.
T Consensus 67 d~~~l----~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (321)
T 3c1o_A 67 EHEKM----VSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRFL 110 (321)
T ss_dssp CHHHH----HHHHTTCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred CHHHH----HHHHcCCCEEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence 1111 2345679999976543 233456777888877 65443
No 199
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=88.39 E-value=1.8 Score=41.39 Aligned_cols=32 Identities=16% Similarity=0.317 Sum_probs=27.1
Q ss_pred CcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 20 ASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 20 ~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.+|+|.| .|.+|+.+++.|...|. +++++|.+
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 46 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGH-DLVLIHRP 46 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecC
Confidence 3799999 58899999999999994 68888754
No 200
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=88.37 E-value=2.2 Score=43.04 Aligned_cols=98 Identities=10% Similarity=0.109 Sum_probs=55.1
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHc-CCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhC-CCCEEE
Q 012768 15 AALEKASVCLLNCGPTGSETLKNLVLG-GIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELN-DAVKAK 92 (456)
Q Consensus 15 ~~L~~~~VlIiG~gglG~eiaknLvl~-Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~ln-p~v~v~ 92 (456)
..++.-+|.|||+|.+|...+..|... |+.=+.++|. ...|++.+++.+.+.+ |.+.+
T Consensus 16 ~~~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~-------------------~~~~~~~~a~~~~~~g~~~~~~- 75 (444)
T 2ixa_A 16 FNPKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADP-------------------DPYMVGRAQEILKKNGKKPAKV- 75 (444)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS-------------------CHHHHHHHHHHHHHTTCCCCEE-
T ss_pred CCCCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeC-------------------CHHHHHHHHHHHHhcCCCCCce-
Confidence 345567899999999999999988764 4433344442 2346666666665543 33332
Q ss_pred EEec---ChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeE
Q 012768 93 FIEE---YPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVML 139 (456)
Q Consensus 93 ~~~~---~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~ 139 (456)
... +.+++.+. .+.|+|+.++.+. ....+...|.+.++.+
T Consensus 76 -~~~~~~~~~~ll~~-----~~vD~V~i~tp~~-~h~~~~~~al~aGkhV 118 (444)
T 2ixa_A 76 -FGNGNDDYKNMLKD-----KNIDAVFVSSPWE-WHHEHGVAAMKAGKIV 118 (444)
T ss_dssp -ECSSTTTHHHHTTC-----TTCCEEEECCCGG-GHHHHHHHHHHTTCEE
T ss_pred -eccCCCCHHHHhcC-----CCCCEEEEcCCcH-HHHHHHHHHHHCCCeE
Confidence 220 22222211 1578888776543 3344555566667653
No 201
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=88.36 E-value=0.32 Score=48.25 Aligned_cols=38 Identities=26% Similarity=0.451 Sum_probs=32.5
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 15 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 15 ~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
..+...+|+|||+|..|..+|..|.+.|+ +++|+|...
T Consensus 22 ~~~~~~dV~IVGaG~aGl~~A~~L~~~G~-~v~v~E~~~ 59 (398)
T 2xdo_A 22 NLLSDKNVAIIGGGPVGLTMAKLLQQNGI-DVSVYERDN 59 (398)
T ss_dssp -CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEECSS
T ss_pred cccCCCCEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence 33556789999999999999999999998 699999753
No 202
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=88.30 E-value=0.43 Score=45.65 Aligned_cols=34 Identities=18% Similarity=0.409 Sum_probs=30.5
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
...|+|||.|..|..+|..|.+.|+ +++|+|...
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~-~V~vlE~~~ 35 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGH-QVHLFDKSR 35 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCC-cEEEEECCC
Confidence 3579999999999999999999998 699999753
No 203
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=88.29 E-value=0.32 Score=47.28 Aligned_cols=35 Identities=17% Similarity=0.306 Sum_probs=31.6
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
..+|+|||+|..|..+|..|.+.|..+++|+|.+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC
Confidence 46899999999999999999999976799999764
No 204
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=88.26 E-value=2.4 Score=38.32 Aligned_cols=35 Identities=23% Similarity=0.146 Sum_probs=28.1
Q ss_pred hcCcEEEEc-CChhHHHHHHHHHHcC-CCcEEEEeCC
Q 012768 18 EKASVCLLN-CGPTGSETLKNLVLGG-IGSITVIDGS 52 (456)
Q Consensus 18 ~~~~VlIiG-~gglG~eiaknLvl~G-v~~itlvD~d 52 (456)
...+|+|.| .|++|..+++.|+..| -.++++++.+
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~ 39 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRS 39 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 356899998 6889999999999995 3467777754
No 205
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=88.26 E-value=0.42 Score=45.67 Aligned_cols=32 Identities=16% Similarity=0.305 Sum_probs=28.7
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.+|.|||+|.+|+.+|..|+.+|. .++++|.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~-~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 579999999999999999999996 68898844
No 206
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=88.21 E-value=1.9 Score=43.99 Aligned_cols=93 Identities=15% Similarity=0.171 Sum_probs=55.2
Q ss_pred hcCcEEEEcCChh-HHHHHHHHHHc--CC--CcEEEEeCCcccccCCCccccccccccCcchHHHHH----HHHHHhCCC
Q 012768 18 EKASVCLLNCGPT-GSETLKNLVLG--GI--GSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVC----AFLQELNDA 88 (456)
Q Consensus 18 ~~~~VlIiG~ggl-G~eiaknLvl~--Gv--~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~----~~l~~lnp~ 88 (456)
++.+|.|||+|++ |..++..|+.. +. ..++|+|-+. .|++.+. ..+......
T Consensus 27 ~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~-------------------e~~~~~~~~~~~~l~~~~~~ 87 (472)
T 1u8x_X 27 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDK-------------------ERQDRIAGACDVFIREKAPD 87 (472)
T ss_dssp CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCH-------------------HHHHHHHHHHHHHHHHHCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCH-------------------HHHHHHHHHHHHHhccCCCC
Confidence 3458999999998 67788888887 66 5699998432 2333222 222345556
Q ss_pred CEEEEEecChhhhhcCCcCCCCCCcEEEEcCCChH--HHHHHHHHHHHcCC
Q 012768 89 VKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEE--KMIKLDRICREANV 137 (456)
Q Consensus 89 v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~--~~~~l~~~~~~~~i 137 (456)
.++.... +. .+.++++|+||.+..... .+.+-..+..++++
T Consensus 88 ~~I~~t~-D~-------~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g~ 130 (472)
T 1u8x_X 88 IEFAATT-DP-------EEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGV 130 (472)
T ss_dssp SEEEEES-CH-------HHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEC-CH-------HHHHcCCCEEEEcCCCccccccchhhhhhhhcCc
Confidence 6666532 11 123568999998765422 23333344555554
No 207
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=88.21 E-value=1.2 Score=42.06 Aligned_cols=96 Identities=14% Similarity=0.213 Sum_probs=55.0
Q ss_pred cCcEEEEcC-ChhHHHHHHHHHH-cCCCcEEEEeCCcc--cccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEE
Q 012768 19 KASVCLLNC-GPTGSETLKNLVL-GGIGSITVIDGSKV--EVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFI 94 (456)
Q Consensus 19 ~~~VlIiG~-gglG~eiaknLvl-~Gv~~itlvD~d~v--~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~ 94 (456)
+-+|.|+|+ |.+|..+++.+.. .|+.=+-++|.+.- ...|++.. .|..+ ..+.+ .
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~-------~g~~~------------~~v~~--~ 63 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGEL-------AGAGK------------TGVTV--Q 63 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCS-------SSSSC------------CSCCE--E
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHH-------cCCCc------------CCcee--c
Confidence 458999998 8999999999874 45432335664321 11122111 01000 01221 1
Q ss_pred ecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEEEee
Q 012768 95 EEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARS 144 (456)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~ 144 (456)
+ + -.+.+.+.|+||..+.+ .....+...|.+++++++.+.+
T Consensus 64 ~-d-------l~~~l~~~DvVIDft~p-~~~~~~~~~a~~~G~~vVigTt 104 (273)
T 1dih_A 64 S-S-------LDAVKDDFDVFIDFTRP-EGTLNHLAFCRQHGKGMVIGTT 104 (273)
T ss_dssp S-C-------STTTTTSCSEEEECSCH-HHHHHHHHHHHHTTCEEEECCC
T ss_pred C-C-------HHHHhcCCCEEEEcCCh-HHHHHHHHHHHhCCCCEEEECC
Confidence 1 1 12345578999977644 4556778899999999665443
No 208
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=88.03 E-value=1.2 Score=42.37 Aligned_cols=96 Identities=15% Similarity=0.079 Sum_probs=55.4
Q ss_pred CcEEEEcC-ChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecC-
Q 012768 20 ASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY- 97 (456)
Q Consensus 20 ~~VlIiG~-gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~- 97 (456)
.+|+|.|+ |.+|..+++.|...|. ++++++.+.- .+++.+ +.+.. +.+++...+..
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~------------------~~~~~~-~~l~~--~~v~~v~~Dl~d 69 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGH-PTYVFTRPNS------------------SKTTLL-DEFQS--LGAIIVKGELDE 69 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTC-CEEEEECTTC------------------SCHHHH-HHHHH--TTCEEEECCTTC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCC-cEEEEECCCC------------------chhhHH-HHhhc--CCCEEEEecCCC
Confidence 58999995 8899999999999994 5777653210 122211 11222 34554332211
Q ss_pred hhhhhcCCcCCCCCCcEEEEcCCC--hHHHHHHHHHHHHcC-CeEEE
Q 012768 98 PEALIEMNPPFFSQFTLVVATQLG--EEKMIKLDRICREAN-VMLIF 141 (456)
Q Consensus 98 ~~~~~~~~~~~~~~~dvVi~~~~~--~~~~~~l~~~~~~~~-ip~i~ 141 (456)
++.+ ...+++.|+||.+... ......+.+.|++.+ ++-+.
T Consensus 70 ~~~l----~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 112 (318)
T 2r6j_A 70 HEKL----VELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFL 112 (318)
T ss_dssp HHHH----HHHHTTCSEEEECCCGGGSTTHHHHHHHHHHHCCCCEEE
T ss_pred HHHH----HHHHcCCCEEEECCchhhhHHHHHHHHHHHhcCCCCEEE
Confidence 1111 2345678999976542 233456777888877 65443
No 209
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=87.92 E-value=0.45 Score=47.29 Aligned_cols=35 Identities=23% Similarity=0.387 Sum_probs=31.6
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
...|+|||+|..|..+|..|.+.|+.+++|+|...
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 56899999999999999999999997699999654
No 210
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=87.92 E-value=0.5 Score=47.34 Aligned_cols=36 Identities=28% Similarity=0.404 Sum_probs=32.8
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKV 54 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v 54 (456)
...|+|||+|..|..+|..|++.|..+++|+|....
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPV 41 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 468999999999999999999999978999998765
No 211
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=87.92 E-value=0.21 Score=48.94 Aligned_cols=37 Identities=16% Similarity=0.170 Sum_probs=32.3
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 15 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 15 ~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
..|..++|.|||+|.+|..+|+.|...|. ++..+|..
T Consensus 167 ~~l~gktiGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~ 203 (340)
T 4dgs_A 167 HSPKGKRIGVLGLGQIGRALASRAEAFGM-SVRYWNRS 203 (340)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSS
T ss_pred ccccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 36889999999999999999999999998 57777743
No 212
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=87.89 E-value=0.58 Score=43.75 Aligned_cols=104 Identities=12% Similarity=0.044 Sum_probs=57.4
Q ss_pred cEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecChh
Q 012768 21 SVCLLN-CGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYPE 99 (456)
Q Consensus 21 ~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~~~ 99 (456)
+|+|.| .|.+|+.+++.|...|. +++.++... .|+. ..+.+.+.+.+..+++-++.-.....
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~--------------~D~~--d~~~~~~~~~~~~~d~vi~~a~~~~~ 69 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEY-DIYPFDKKL--------------LDIT--NISQVQQVVQEIRPHIIIHCAAYTKV 69 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTE-EEEEECTTT--------------SCTT--CHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEecccc--------------cCCC--CHHHHHHHHHhcCCCEEEECCcccCh
Confidence 799999 58899999999999985 688877521 2222 22344455554444443332111000
Q ss_pred hhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEEEeecccee
Q 012768 100 ALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGLTG 149 (456)
Q Consensus 100 ~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~~G 149 (456)
..... ..+-.+ ..+......+.+.|++.++.+|..++.+.+|
T Consensus 70 ~~~~~------~~~~~~--~~n~~~~~~l~~~~~~~~~~~v~~SS~~vy~ 111 (287)
T 3sc6_A 70 DQAEK------ERDLAY--VINAIGARNVAVASQLVGAKLVYISTDYVFQ 111 (287)
T ss_dssp HHHTT------CHHHHH--HHHTHHHHHHHHHHHHHTCEEEEEEEGGGSC
T ss_pred HHHhc------CHHHHH--HHHHHHHHHHHHHHHHcCCeEEEEchhhhcC
Confidence 00000 000000 0011223456778888888999998877765
No 213
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=87.87 E-value=0.43 Score=44.81 Aligned_cols=32 Identities=22% Similarity=0.285 Sum_probs=28.9
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 21 SVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 21 ~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
+|+|+|+|.+|+.++..|...|. .++++|.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCC-CEEEEEcCc
Confidence 69999999999999999999996 799998654
No 214
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=87.86 E-value=2.8 Score=42.87 Aligned_cols=35 Identities=17% Similarity=0.192 Sum_probs=30.8
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
...+|+|||+|.+|..+|..|+..|. .++++|.+.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~-~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGH-DVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCC-EEEEEECCH
Confidence 46789999999999999999999997 599998653
No 215
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=87.71 E-value=3.2 Score=42.46 Aligned_cols=92 Identities=12% Similarity=0.203 Sum_probs=53.1
Q ss_pred cCcEEEEcCChh--HHHHHHHHHHc-C--CCcEEEEeCCcccccCCCccccccccccCcchHHHHHHH----HHHhCCCC
Q 012768 19 KASVCLLNCGPT--GSETLKNLVLG-G--IGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAF----LQELNDAV 89 (456)
Q Consensus 19 ~~~VlIiG~ggl--G~eiaknLvl~-G--v~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~----l~~lnp~v 89 (456)
..+|.|||+|++ |+.+|..|+.. + ...++|+|-+. .|++.+... +.......
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~-------------------e~l~~~~~~~~~~l~~~~~~~ 63 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDE-------------------ERLDAILTIAKKYVEEVGADL 63 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCH-------------------HHHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCH-------------------HHHHHHHHHHHHHhccCCCCc
Confidence 568999999996 67778888753 3 46799998432 233332222 22334445
Q ss_pred EEEEEecChhhhhcCCcCCCCCCcEEEEcCCChHH--HHHHHHHHHHcCC
Q 012768 90 KAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEK--MIKLDRICREANV 137 (456)
Q Consensus 90 ~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~--~~~l~~~~~~~~i 137 (456)
+++... +. .+.++++|+||.+...... +..-.++..+.++
T Consensus 64 ~I~~tt-D~-------~eal~dAD~VIiaagv~~~~~~~~dE~ip~K~g~ 105 (480)
T 1obb_A 64 KFEKTM-NL-------DDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGY 105 (480)
T ss_dssp EEEEES-CH-------HHHHTTCSEEEECCCTTHHHHHHHHHHHHHHTTC
T ss_pred EEEEEC-CH-------HHHhCCCCEEEECCCccccccccccccccccccc
Confidence 555432 11 1235689999988754332 3333445556554
No 216
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=87.69 E-value=0.43 Score=47.37 Aligned_cols=35 Identities=26% Similarity=0.357 Sum_probs=32.3
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
.+..++|+|+|+|++|..+++.+...|. +++++|.
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~ 199 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGA-TVTVLDI 199 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeC
Confidence 5789999999999999999999999999 7999884
No 217
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=87.68 E-value=0.47 Score=47.07 Aligned_cols=39 Identities=18% Similarity=0.175 Sum_probs=31.3
Q ss_pred HHHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 14 QAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 14 q~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
.+..+..+|+|||+|..|..+|..|.+.|+ +++|+|.+.
T Consensus 18 ~~~~~~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~E~~~ 56 (407)
T 3rp8_A 18 LYFQGHMKAIVIGAGIGGLSAAVALKQSGI-DCDVYEAVK 56 (407)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 445667899999999999999999999998 599999764
No 218
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=87.57 E-value=2.7 Score=39.73 Aligned_cols=32 Identities=25% Similarity=0.220 Sum_probs=25.9
Q ss_pred cCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 19 KASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 19 ~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
..+|+|.| .|.+|+.+++.|...|. ++++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~-~v~~~~r 35 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGD-VELVLRT 35 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTT-EEEECCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEec
Confidence 46899999 58899999999999986 4666553
No 219
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=87.51 E-value=0.57 Score=42.42 Aligned_cols=32 Identities=22% Similarity=0.246 Sum_probs=27.8
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
..+|+|+|+|.+|..+++.|...|. +++++|.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~-~V~~~~r 59 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGF-KVVVGSR 59 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTC-CEEEEES
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 3689999999999999999999996 5888774
No 220
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=87.42 E-value=0.46 Score=46.84 Aligned_cols=34 Identities=26% Similarity=0.347 Sum_probs=31.5
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
++..+|+|+|+|++|..++..+...|. +++++|.
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr 198 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDI 198 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeC
Confidence 667899999999999999999999999 8999874
No 221
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=87.39 E-value=1.3 Score=40.21 Aligned_cols=87 Identities=13% Similarity=0.090 Sum_probs=49.4
Q ss_pred cCcEEEEcCChhHHHHHHH--HHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEec
Q 012768 19 KASVCLLNCGPTGSETLKN--LVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 96 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiakn--Lvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~ 96 (456)
..+|+|+|+|.+|..+++. ....|+.=+-++|.|.-.. |+. + ..+.+...+
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~--------------g~~-----------i-~gv~V~~~~- 137 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKI--------------GTE-----------V-GGVPVYNLD- 137 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTT--------------TCE-----------E-TTEEEEEGG-
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHH--------------HhH-----------h-cCCeeechh-
Confidence 3689999999999999994 3355777778888654211 110 0 013333211
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEE
Q 012768 97 YPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLI 140 (456)
Q Consensus 97 ~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i 140 (456)
.... .++..|+|+.|..+. ....+.+.|.+.++.-|
T Consensus 138 dl~e-------li~~~D~ViIAvPs~-~~~ei~~~l~~aGi~~I 173 (215)
T 2vt3_A 138 DLEQ-------HVKDESVAILTVPAV-AAQSITDRLVALGIKGI 173 (215)
T ss_dssp GHHH-------HCSSCCEEEECSCHH-HHHHHHHHHHHTTCCEE
T ss_pred hHHH-------HHHhCCEEEEecCch-hHHHHHHHHHHcCCCEE
Confidence 1111 222338998887653 34577888888888744
No 222
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=87.25 E-value=1.7 Score=42.32 Aligned_cols=32 Identities=25% Similarity=0.346 Sum_probs=25.5
Q ss_pred cCcEEEEcCChhHHHHHHHHHHc--CCCcEEEEe
Q 012768 19 KASVCLLNCGPTGSETLKNLVLG--GIGSITVID 50 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~--Gv~~itlvD 50 (456)
..+|.|||+|.+|...++.|... |+.-+.++|
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d 46 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCD 46 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEEC
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEc
Confidence 45899999999999999999987 444444665
No 223
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=87.22 E-value=1.7 Score=43.25 Aligned_cols=110 Identities=12% Similarity=0.108 Sum_probs=60.2
Q ss_pred CcEEEEcC-ChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHh---------CCCC
Q 012768 20 ASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQEL---------NDAV 89 (456)
Q Consensus 20 ~~VlIiG~-gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~l---------np~v 89 (456)
.+|+|.|+ |++|+++++.|...|. ++++++...- .....+.+.+.+.+. .+.+
T Consensus 70 ~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~R~~~----------------~~~~~~~l~~~l~~~~~~~~~~~~~~~v 132 (427)
T 4f6c_A 70 GNTLLTGATGFLGAYLIEALQGYSH-RIYCFIRADN----------------EEIAWYKLMTNLNDYFSEETVEMMLSNI 132 (427)
T ss_dssp EEEEEECTTSHHHHHHHHHHTTTEE-EEEEEEECSS----------------HHHHHHHHHHHHHHHSCHHHHHHHHTTE
T ss_pred CEEEEecCCcHHHHHHHHHHHcCCC-EEEEEECCCC----------------hHHHHHHHHHHHHHhccccccccccCce
Confidence 37999995 8899999999977765 5666542110 000122222333332 2334
Q ss_pred EEEEEecChhhhhcCCcCCCCCCcEEEEcCCCh--------------HHHHHHHHHHHHcCCeEEEEeeccceeeE
Q 012768 90 KAKFIEEYPEALIEMNPPFFSQFTLVVATQLGE--------------EKMIKLDRICREANVMLIFARSYGLTGFV 151 (456)
Q Consensus 90 ~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~--------------~~~~~l~~~~~~~~ip~i~~~~~G~~G~v 151 (456)
. .+..+..+. .....+.+.|+||.+.... .....+.+.|.+....+|..++.+. |..
T Consensus 133 ~--~v~~Dl~d~--~~l~~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~~ 203 (427)
T 4f6c_A 133 E--VIVGDFECM--DDVVLPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTY 203 (427)
T ss_dssp E--EEEECC-----CCCCCSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GSE
T ss_pred E--EEeCCCCCc--ccCCCcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CCC
Confidence 3 333322111 1111456899999653211 1124455677776678898888877 654
No 224
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=87.21 E-value=0.54 Score=45.56 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=29.2
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
++-.+|.|||+|..|+-+|.+|+.+|. .++++|.+
T Consensus 4 ~~~~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~ 38 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIE 38 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSC
T ss_pred CCCceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 345789999999999999999999998 58998844
No 225
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=87.19 E-value=3.5 Score=40.27 Aligned_cols=32 Identities=22% Similarity=0.311 Sum_probs=26.8
Q ss_pred CcEEEEc-CChhHHHHHHHHH-HcCCCcEEEEeCC
Q 012768 20 ASVCLLN-CGPTGSETLKNLV-LGGIGSITVIDGS 52 (456)
Q Consensus 20 ~~VlIiG-~gglG~eiaknLv-l~Gv~~itlvD~d 52 (456)
.+|+|.| .|.+|+.+++.|+ ..|. +++++|..
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~-~V~~~~r~ 36 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNH-SVVIVDSL 36 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCC-EEEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCC-EEEEEecC
Confidence 4799998 5889999999999 9995 67777743
No 226
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=87.15 E-value=0.5 Score=44.87 Aligned_cols=31 Identities=29% Similarity=0.403 Sum_probs=27.9
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
.+|+|+|+|.+|+.++..|...|. .++++|.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r 34 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQ 34 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEEC
Confidence 479999999999999999999996 6888874
No 227
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=87.13 E-value=0.55 Score=44.20 Aligned_cols=27 Identities=15% Similarity=0.197 Sum_probs=23.7
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHcCC
Q 012768 17 LEKASVCLLN-CGPTGSETLKNLVLGGI 43 (456)
Q Consensus 17 L~~~~VlIiG-~gglG~eiaknLvl~Gv 43 (456)
++..+|+|.| .|.+|+.+++.|...|.
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~ 31 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAG 31 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCC
Confidence 4567899999 58899999999999986
No 228
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=87.13 E-value=0.53 Score=45.50 Aligned_cols=35 Identities=17% Similarity=0.255 Sum_probs=29.1
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCC---CcEEEEeC
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGI---GSITVIDG 51 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv---~~itlvD~ 51 (456)
+...+|.|||+|.+|+.++.+|...|+ ..++++|.
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r 57 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSP 57 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECC
Confidence 444689999999999999999999995 57888863
No 229
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=87.11 E-value=0.2 Score=49.16 Aligned_cols=38 Identities=18% Similarity=0.220 Sum_probs=33.1
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 15 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 15 ~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
..|..++|.|||+|.+|..+|+.|...|. +++.+|...
T Consensus 144 ~~l~gktvgIiGlG~IG~~vA~~l~~~G~-~V~~~d~~~ 181 (343)
T 2yq5_A 144 NEIYNLTVGLIGVGHIGSAVAEIFSAMGA-KVIAYDVAY 181 (343)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred cccCCCeEEEEecCHHHHHHHHHHhhCCC-EEEEECCCh
Confidence 35889999999999999999999999998 588888543
No 230
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=87.11 E-value=0.57 Score=45.77 Aligned_cols=35 Identities=23% Similarity=0.364 Sum_probs=31.5
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKV 54 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v 54 (456)
...|+|||.|..|+.+|..|++.|.+ ++|+|...+
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G~~-V~lle~~~~ 39 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRGEE-VTVIEKRFI 39 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCC-EEEECSSST
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCe-EEEEeCCCC
Confidence 46899999999999999999999985 999997654
No 231
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=87.08 E-value=0.54 Score=45.34 Aligned_cols=32 Identities=22% Similarity=0.267 Sum_probs=28.8
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.+|+|+|+|++|+.++..|..+|. .++++|.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH-CVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC-EEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 589999999999999999999995 78888754
No 232
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=87.06 E-value=0.53 Score=45.24 Aligned_cols=32 Identities=13% Similarity=0.117 Sum_probs=28.1
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.+|+|+|+|++|+.++..|..+|. .++++|.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE-DVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC-CEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEEcC
Confidence 589999999999999999999995 68888754
No 233
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=87.03 E-value=0.55 Score=45.67 Aligned_cols=36 Identities=22% Similarity=0.292 Sum_probs=31.7
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCccc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVE 55 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~ 55 (456)
...|+|||+|.+|+.+|..|++.|. +++|+|...+.
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~-~V~vle~~~~~ 41 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGY-SVHILARDLPE 41 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSCTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC-EEEEEeccCCC
Confidence 4689999999999999999999997 69999976543
No 234
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=87.03 E-value=2.6 Score=40.04 Aligned_cols=106 Identities=13% Similarity=0.159 Sum_probs=55.4
Q ss_pred HHHHHHhc-CcEEEEc-CChhHHHHHHHHHH-cCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhC-C
Q 012768 12 QGQAALEK-ASVCLLN-CGPTGSETLKNLVL-GGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELN-D 87 (456)
Q Consensus 12 ~~q~~L~~-~~VlIiG-~gglG~eiaknLvl-~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~ln-p 87 (456)
++|..+.. -||.|+| +|.+|..+++.+.. .++.=+-++|...- + ....|+|. +..+. .
T Consensus 13 ~~~~~m~~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~---~------~~G~d~ge---------l~G~~~~ 74 (288)
T 3ijp_A 13 EAQTQGPGSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGS---S------FVDKDASI---------LIGSDFL 74 (288)
T ss_dssp --------CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTC---T------TTTSBGGG---------GTTCSCC
T ss_pred hhhhhccCCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc---c------ccccchHH---------hhccCcC
Confidence 45554443 4899999 89999999998874 34433334453210 0 01112221 00111 1
Q ss_pred CCEEEEEecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEEEeeccc
Q 012768 88 AVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGL 147 (456)
Q Consensus 88 ~v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~ 147 (456)
.+. +..+.+ +.+.++|+||..+.+ .........|.++++|+|. ++.|+
T Consensus 75 gv~---v~~dl~-------~ll~~aDVvIDFT~p-~a~~~~~~~~l~~Gv~vVi-GTTG~ 122 (288)
T 3ijp_A 75 GVR---ITDDPE-------SAFSNTEGILDFSQP-QASVLYANYAAQKSLIHII-GTTGF 122 (288)
T ss_dssp SCB---CBSCHH-------HHTTSCSEEEECSCH-HHHHHHHHHHHHHTCEEEE-CCCCC
T ss_pred Cce---eeCCHH-------HHhcCCCEEEEcCCH-HHHHHHHHHHHHcCCCEEE-ECCCC
Confidence 222 111222 234578999988754 4455667789999999774 44554
No 235
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=86.96 E-value=0.77 Score=44.81 Aligned_cols=31 Identities=13% Similarity=0.095 Sum_probs=26.5
Q ss_pred cEEEEc-CChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 21 SVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 21 ~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
+|+|.| .|.+|..+++.|...|.-.++.+|.
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~ 33 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHR 33 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEECCT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEECC
Confidence 699999 6889999999999999856777664
No 236
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=86.95 E-value=1.8 Score=40.20 Aligned_cols=98 Identities=17% Similarity=0.187 Sum_probs=57.2
Q ss_pred CcEEEEcC-ChhHHHHHHHHHHc--CCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEec
Q 012768 20 ASVCLLNC-GPTGSETLKNLVLG--GIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 96 (456)
Q Consensus 20 ~~VlIiG~-gglG~eiaknLvl~--Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~ 96 (456)
.+|+|.|+ |.+|+.+++.|... | .++++++.+.- ++. .+.. +.+++...+.
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~-------------------~~~----~l~~--~~~~~~~~D~ 54 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPA-SQIIAIVRNVE-------------------KAS----TLAD--QGVEVRHGDY 54 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCG-GGEEEEESCTT-------------------TTH----HHHH--TTCEEEECCT
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCC-CeEEEEEcCHH-------------------HHh----HHhh--cCCeEEEecc
Confidence 36899995 88999999999988 7 46777764210 111 1111 2344322221
Q ss_pred C-hhhhhcCCcCCCCCCcEEEEcCC-------ChHHHHHHHHHHHHcCC-eEEEEeeccc
Q 012768 97 Y-PEALIEMNPPFFSQFTLVVATQL-------GEEKMIKLDRICREANV-MLIFARSYGL 147 (456)
Q Consensus 97 ~-~~~~~~~~~~~~~~~dvVi~~~~-------~~~~~~~l~~~~~~~~i-p~i~~~~~G~ 147 (456)
. ++.+ .+.++++|+||.+.. +......+.+.|++.++ .+|..++.+.
T Consensus 55 ~d~~~l----~~~~~~~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~ 110 (287)
T 2jl1_A 55 NQPESL----QKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAFA 110 (287)
T ss_dssp TCHHHH----HHHTTTCSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETTG
T ss_pred CCHHHH----HHHHhcCCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCCC
Confidence 1 1111 233567899985532 22334566678888876 6777777654
No 237
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=86.90 E-value=0.39 Score=47.09 Aligned_cols=35 Identities=23% Similarity=0.337 Sum_probs=31.5
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
....|+|||+|..|..+|..|++.|+ +++|+|.+.
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~-~V~l~E~~~ 37 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGL-KTLMIEKRP 37 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence 35689999999999999999999998 699999765
No 238
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=86.89 E-value=1 Score=44.28 Aligned_cols=32 Identities=22% Similarity=0.307 Sum_probs=29.2
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEe
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD 50 (456)
..+|+|+|+|++|..++.-+...|.++++.+|
T Consensus 183 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~ 214 (370)
T 4ej6_A 183 GSTVAILGGGVIGLLTVQLARLAGATTVILST 214 (370)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEC
Confidence 57899999999999999999999998888886
No 239
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=86.87 E-value=0.5 Score=44.99 Aligned_cols=32 Identities=22% Similarity=0.214 Sum_probs=29.3
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.+|+|+|+|++|+.++..|..+|. .++++|.+
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~-~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLP-HTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCT-TCEEEESS
T ss_pred cEEEEECCCHHHHHHHHHHHHCCC-eEEEEEec
Confidence 589999999999999999999995 79999865
No 240
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=86.86 E-value=2.8 Score=39.92 Aligned_cols=32 Identities=22% Similarity=0.442 Sum_probs=26.2
Q ss_pred cEEEEc-CChhHHHHHHHHHHc---CC--CcEEEEeCC
Q 012768 21 SVCLLN-CGPTGSETLKNLVLG---GI--GSITVIDGS 52 (456)
Q Consensus 21 ~VlIiG-~gglG~eiaknLvl~---Gv--~~itlvD~d 52 (456)
+|+|.| .|.+|+.+++.|... |+ .+++++|..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~ 39 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSL 39 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECC
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECC
Confidence 699998 688999999999996 53 578888743
No 241
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=86.81 E-value=1.7 Score=41.86 Aligned_cols=32 Identities=22% Similarity=0.228 Sum_probs=28.1
Q ss_pred cEEEEcC-ChhHHHHHHHHHHcCC-CcEEEEeCC
Q 012768 21 SVCLLNC-GPTGSETLKNLVLGGI-GSITVIDGS 52 (456)
Q Consensus 21 ~VlIiG~-gglG~eiaknLvl~Gv-~~itlvD~d 52 (456)
||+|+|+ |.+|..++..|+..|. ..++++|-+
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~ 35 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIA 35 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCC
Confidence 7999998 9999999999998885 669999844
No 242
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=86.80 E-value=3.7 Score=39.20 Aligned_cols=32 Identities=31% Similarity=0.370 Sum_probs=27.0
Q ss_pred cCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 19 KASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 19 ~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
..+|+|.| .|.+|+.+++.|+..|. +++++|.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r 34 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGY-LPVVIDN 34 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTC-CEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEec
Confidence 35899998 58899999999999995 5777764
No 243
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=86.72 E-value=0.48 Score=46.26 Aligned_cols=35 Identities=11% Similarity=0.164 Sum_probs=31.3
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKV 54 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v 54 (456)
...|+|||.|..|..+|..|++.|. +++|+|...+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~-~V~llE~~~~ 51 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENK-NTALFESGTM 51 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCC-cEEEEeCCCC
Confidence 4689999999999999999999998 6999997654
No 244
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=86.69 E-value=2.3 Score=45.43 Aligned_cols=36 Identities=25% Similarity=0.311 Sum_probs=27.8
Q ss_pred HHHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 15 AALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 15 ~~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
..++..+|+|.| .|.+|+.+++.|+..|. +++++|.
T Consensus 7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~-~V~~~~r 43 (699)
T 1z45_A 7 SESTSKIVLVTGGAGYIGSHTVVELIENGY-DCVVADN 43 (699)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEC
Confidence 456778999998 58899999999999995 6777764
No 245
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=86.64 E-value=2.2 Score=40.68 Aligned_cols=31 Identities=29% Similarity=0.455 Sum_probs=26.1
Q ss_pred CcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 20 ASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 20 ~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
.+|+|.| .|.+|+.+++.|...|. +++++|.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r 33 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDN 33 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCC-EEEEEeC
Confidence 3799999 68899999999999995 5777763
No 246
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=86.60 E-value=1.2 Score=43.06 Aligned_cols=34 Identities=29% Similarity=0.374 Sum_probs=30.5
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
...+|+|.|+|++|.-.+..+...|...++.+|.
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~ 193 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDI 193 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEES
T ss_pred CCCEEEEECCCCcchHHHHHHHHcCCcEEEEEec
Confidence 4678999999999999999999999999888873
No 247
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=86.60 E-value=4.9 Score=38.34 Aligned_cols=75 Identities=13% Similarity=0.084 Sum_probs=43.5
Q ss_pred hcCcEEEEcCChhHHHHHHHHHH-cCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEec
Q 012768 18 EKASVCLLNCGPTGSETLKNLVL-GGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 96 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl-~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~ 96 (456)
...+||.||||+.|.. +..|++ .| .+++-+|.+ ....+.+++++.+..- -+++.+..
T Consensus 122 ~g~rVLDIGcG~G~~t-a~~lA~~~g-a~V~gIDis-------------------~~~l~~Ar~~~~~~gl-~~v~~v~g 179 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLT-GILLSHVYG-MRVNVVEIE-------------------PDIAELSRKVIEGLGV-DGVNVITG 179 (298)
T ss_dssp TTCEEEEECCCSSCHH-HHHHHHTTC-CEEEEEESS-------------------HHHHHHHHHHHHHHTC-CSEEEEES
T ss_pred CcCEEEEECCCccHHH-HHHHHHccC-CEEEEEECC-------------------HHHHHHHHHHHHhcCC-CCeEEEEC
Confidence 4678999999964321 111333 45 468888733 2355566666666543 34555555
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCC
Q 012768 97 YPEALIEMNPPFFSQFTLVVATQL 120 (456)
Q Consensus 97 ~~~~~~~~~~~~~~~~dvVi~~~~ 120 (456)
+...+. -..||+|+....
T Consensus 180 Da~~l~------d~~FDvV~~~a~ 197 (298)
T 3fpf_A 180 DETVID------GLEFDVLMVAAL 197 (298)
T ss_dssp CGGGGG------GCCCSEEEECTT
T ss_pred chhhCC------CCCcCEEEECCC
Confidence 443331 247999997544
No 248
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=86.55 E-value=0.58 Score=46.27 Aligned_cols=35 Identities=20% Similarity=0.349 Sum_probs=31.3
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCC-cEEEEeCCc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIG-SITVIDGSK 53 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~-~itlvD~d~ 53 (456)
.+||+|||.|..|..+|+.|.+.|-+ +|||+|...
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNE 37 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCC
Confidence 57999999999999999999999875 799998654
No 249
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=86.46 E-value=0.55 Score=46.36 Aligned_cols=35 Identities=29% Similarity=0.401 Sum_probs=31.9
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
.+...+|+|+|+|++|..+++.+...|. +++++|.
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~ 197 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGMGA-QVTILDV 197 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 4778999999999999999999999998 7999873
No 250
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=86.35 E-value=1.5 Score=42.74 Aligned_cols=33 Identities=27% Similarity=0.259 Sum_probs=29.1
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
..+|+|+|+|++|..++.-+...|.++++.+|.
T Consensus 172 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 204 (356)
T 1pl8_A 172 GHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDL 204 (356)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 468999999999999999888899988888873
No 251
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=86.35 E-value=1.2 Score=40.73 Aligned_cols=33 Identities=15% Similarity=0.151 Sum_probs=27.6
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEe
Q 012768 17 LEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 17 L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD 50 (456)
|++++|+|.| .||+|.++++.|+..|. ++.++|
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~ 36 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGA-TVVGTA 36 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEe
Confidence 5677888888 68899999999999997 477766
No 252
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=86.33 E-value=1.5 Score=41.76 Aligned_cols=34 Identities=15% Similarity=0.123 Sum_probs=28.0
Q ss_pred cCcEEEEc-CChhHHHHHHHHHHcCC-CcEEEEeCC
Q 012768 19 KASVCLLN-CGPTGSETLKNLVLGGI-GSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG-~gglG~eiaknLvl~Gv-~~itlvD~d 52 (456)
+.+|+|.| .|++|..+++.|+..|- .+++++|..
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~ 38 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKL 38 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECC
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 45799999 58899999999999984 468887753
No 253
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=86.31 E-value=0.86 Score=42.69 Aligned_cols=41 Identities=15% Similarity=0.121 Sum_probs=28.8
Q ss_pred cCHHHHH-HHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEe
Q 012768 9 WGEQGQA-ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 9 wG~~~q~-~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD 50 (456)
+|+..+. .|+++.|+|.| .||+|.++++.|+..|. ++.++|
T Consensus 17 ~gp~~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~ 59 (270)
T 3ftp_A 17 QGPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGA-MVIGTA 59 (270)
T ss_dssp ------CCTTTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCcccccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEe
Confidence 6665554 47777788887 68999999999999998 577766
No 254
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=86.28 E-value=1.3 Score=40.76 Aligned_cols=52 Identities=15% Similarity=0.169 Sum_probs=38.2
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCC
Q 012768 16 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELND 87 (456)
Q Consensus 16 ~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp 87 (456)
.++++.|+|.| .||+|.++++.|+..|. ++.++|.+ ..+.+.+.+.+.+.++
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~~ 56 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARS-------------------KQNLEKVHDEIMRSNK 56 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESC-------------------HHHHHHHHHHHHHHCT
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECC-------------------HHHHHHHHHHHHHhcc
Confidence 35677889998 58999999999999998 57777632 2355666666666654
No 255
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=86.08 E-value=0.57 Score=45.55 Aligned_cols=32 Identities=22% Similarity=0.326 Sum_probs=28.6
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
+--|+|||+|..|+.+|..|++.|+. ++|+|.
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~-V~v~Er 35 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLK-TLMIEK 35 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC-EEEECS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCc-EEEEeC
Confidence 34699999999999999999999985 889885
No 256
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=86.07 E-value=0.99 Score=42.10 Aligned_cols=34 Identities=12% Similarity=0.023 Sum_probs=29.0
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEe
Q 012768 16 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 16 ~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD 50 (456)
.+.+++|+|.| .|++|.++++.|+..|. +++++|
T Consensus 28 ~l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~ 62 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWD 62 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEE
Confidence 36778899998 68899999999999996 477776
No 257
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=86.01 E-value=0.65 Score=45.12 Aligned_cols=43 Identities=12% Similarity=0.253 Sum_probs=35.5
Q ss_pred cCHHH-HHHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 9 WGEQG-QAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 9 wG~~~-q~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
|.... ...|..++|.|||+|.+|..+|+.|...|. ++..+|..
T Consensus 126 W~~~~~~~~l~gktvGIiGlG~IG~~vA~~l~~~G~-~V~~~dr~ 169 (324)
T 3evt_A 126 WALPMTTSTLTGQQLLIYGTGQIGQSLAAKASALGM-HVIGVNTT 169 (324)
T ss_dssp SSCSSCCCCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred cccCCCCccccCCeEEEECcCHHHHHHHHHHHhCCC-EEEEECCC
Confidence 64432 346889999999999999999999999998 57888854
No 258
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=85.99 E-value=0.47 Score=46.69 Aligned_cols=42 Identities=24% Similarity=0.326 Sum_probs=34.6
Q ss_pred cCHHHH----HHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 9 WGEQGQ----AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 9 wG~~~q----~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
|..... ..|..++|.|||+|.+|..+|+.|...|.. ++.+|.
T Consensus 150 W~~~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l~~~G~~-V~~~dr 195 (351)
T 3jtm_A 150 WNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPFGCN-LLYHDR 195 (351)
T ss_dssp CCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCCE-EEEECS
T ss_pred CccccccCCcccccCCEEeEEEeCHHHHHHHHHHHHCCCE-EEEeCC
Confidence 765433 248899999999999999999999999985 777764
No 259
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=85.91 E-value=0.63 Score=45.96 Aligned_cols=35 Identities=26% Similarity=0.278 Sum_probs=31.2
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
.|..++|+|+|+|.+|..+|+.|...|.+ +++.|.
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~Gak-Vvv~D~ 204 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAK-LVVTDV 204 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEECS
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCE-EEEEcC
Confidence 37789999999999999999999999985 778873
No 260
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=85.88 E-value=0.8 Score=42.58 Aligned_cols=34 Identities=15% Similarity=0.079 Sum_probs=27.9
Q ss_pred cCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 19 KASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 19 ~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
.++|+|.| .|++|.++++.|+..|. +++++|.+.
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~-~V~~~~r~~ 37 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAE-ILRLADLSP 37 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEE-EEEEEESSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCC-EEEEEecCC
Confidence 45799998 68899999999999995 577877543
No 261
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=85.84 E-value=0.72 Score=42.99 Aligned_cols=33 Identities=15% Similarity=0.167 Sum_probs=29.9
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
.+|+|||.|..|..+|..|.+.|. +++|+|...
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~-~v~lie~~~ 35 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARK-NILLVDAGE 35 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-CEEEEECCC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 579999999999999999999997 799999653
No 262
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=85.75 E-value=0.7 Score=46.03 Aligned_cols=30 Identities=17% Similarity=0.302 Sum_probs=26.4
Q ss_pred CcEEEEcCChhHHHHHHHHHH-cCCCcEEEEe
Q 012768 20 ASVCLLNCGPTGSETLKNLVL-GGIGSITVID 50 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl-~Gv~~itlvD 50 (456)
.+|+|+|+|.+|+.+|..|+. +|. .++++|
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~-~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGV-EVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTE-EEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCC-EEEEEe
Confidence 379999999999999999998 485 688887
No 263
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=85.73 E-value=0.51 Score=45.22 Aligned_cols=33 Identities=21% Similarity=0.336 Sum_probs=30.0
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
..+|+|||+|..|..+|..|.+.|. +++|+|..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~-~v~vie~~ 35 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGL-SYVILDAE 35 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSC-CEEEECCS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECC
Confidence 4689999999999999999999998 59999965
No 264
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=85.72 E-value=1.7 Score=42.06 Aligned_cols=88 Identities=11% Similarity=0.167 Sum_probs=49.8
Q ss_pred CcEEEEcCChhHHHHHHHHHHc-CCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecCh
Q 012768 20 ASVCLLNCGPTGSETLKNLVLG-GIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYP 98 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~-Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~~ 98 (456)
.+|.|||+|.+|...+++|... |+.-+.++|.+ ..|++.+++ +.+ +. ... +.
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~-------------------~~~~~~~a~---~~g--~~--~~~-~~ 57 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPF-------------------IEGAQRLAE---ANG--AE--AVA-SP 57 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSS-------------------HHHHHHHHH---TTT--CE--EES-SH
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCC-------------------HHHHHHHHH---HcC--Cc--eeC-CH
Confidence 4899999999999999999875 44333355522 123333322 222 32 222 33
Q ss_pred hhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEE
Q 012768 99 EALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLI 140 (456)
Q Consensus 99 ~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i 140 (456)
+++... .+.|+|+.++.+. ....+...|.+.+++++
T Consensus 58 ~~~l~~-----~~~D~V~i~tp~~-~h~~~~~~al~~gk~v~ 93 (344)
T 3euw_A 58 DEVFAR-----DDIDGIVIGSPTS-THVDLITRAVERGIPAL 93 (344)
T ss_dssp HHHTTC-----SCCCEEEECSCGG-GHHHHHHHHHHTTCCEE
T ss_pred HHHhcC-----CCCCEEEEeCCch-hhHHHHHHHHHcCCcEE
Confidence 333211 1678998887553 33444556667776644
No 265
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=85.55 E-value=5.1 Score=38.63 Aligned_cols=31 Identities=19% Similarity=0.430 Sum_probs=24.0
Q ss_pred CcEEEEcCChhHHHHHHHHH-H-cCCCcEEEEe
Q 012768 20 ASVCLLNCGPTGSETLKNLV-L-GGIGSITVID 50 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLv-l-~Gv~~itlvD 50 (456)
.+|.|||+|.+|...+++|. . .|+.-+.++|
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d 35 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTD 35 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEEC
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEc
Confidence 47999999999999999998 4 4544344555
No 266
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=85.52 E-value=0.5 Score=45.95 Aligned_cols=35 Identities=14% Similarity=0.265 Sum_probs=31.0
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKV 54 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v 54 (456)
...|+|||+|.+|+.+|..|++.|. +++|+|....
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~-~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGL-NVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTC-CEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCC
Confidence 3579999999999999999999997 6999997654
No 267
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=85.51 E-value=0.68 Score=44.69 Aligned_cols=35 Identities=14% Similarity=0.163 Sum_probs=31.1
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
.|..++|.|||+|.+|..+|+.|...|. +++.+|.
T Consensus 139 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~ 173 (313)
T 2ekl_A 139 ELAGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDI 173 (313)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECC
Confidence 5888999999999999999999999996 5777774
No 268
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=85.48 E-value=1.5 Score=42.28 Aligned_cols=31 Identities=19% Similarity=0.186 Sum_probs=26.7
Q ss_pred cEEEEc-CChhHHHHHHHHHHc-CC-CcEEEEeC
Q 012768 21 SVCLLN-CGPTGSETLKNLVLG-GI-GSITVIDG 51 (456)
Q Consensus 21 ~VlIiG-~gglG~eiaknLvl~-Gv-~~itlvD~ 51 (456)
+|.|+| +|.+|..++..|... +. ..++|+|-
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di 35 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDI 35 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECS
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEec
Confidence 799999 899999999999875 54 57999984
No 269
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=85.48 E-value=0.71 Score=45.28 Aligned_cols=36 Identities=14% Similarity=0.093 Sum_probs=30.7
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
+...+|+|||+|..|..+|..|.+.|+ +++|+|...
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~-~v~viE~~~ 44 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGW-DVRLHEKSS 44 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEecCC
Confidence 456789999999999999999999997 599999654
No 270
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=85.45 E-value=0.67 Score=47.50 Aligned_cols=35 Identities=14% Similarity=0.203 Sum_probs=31.5
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
|..++|+|+|+|++|..+|+.|...|. ++.++|.+
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~ 297 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEID 297 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 678899999999999999999999998 78888743
No 271
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=85.40 E-value=2.4 Score=40.29 Aligned_cols=35 Identities=9% Similarity=0.137 Sum_probs=25.6
Q ss_pred HhcCcEEEEcCChhHHH-HHHHHHH-cCCCcEEEEeC
Q 012768 17 LEKASVCLLNCGPTGSE-TLKNLVL-GGIGSITVIDG 51 (456)
Q Consensus 17 L~~~~VlIiG~gglG~e-iaknLvl-~Gv~~itlvD~ 51 (456)
++..+|.|||+|.+|.. .++.|.. .|+.-+.++|.
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~ 40 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTP 40 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECS
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECC
Confidence 45679999999999996 8888876 45444446663
No 272
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=85.37 E-value=0.61 Score=45.46 Aligned_cols=37 Identities=19% Similarity=0.268 Sum_probs=32.2
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 15 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 15 ~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
..|..++|.|||+|.+|..+|+.|...|. +++.+|..
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~~G~-~V~~~d~~ 178 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIPFGV-KLYYWSRH 178 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSS
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCC
Confidence 35889999999999999999999999996 58888743
No 273
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=85.28 E-value=0.79 Score=44.63 Aligned_cols=35 Identities=14% Similarity=0.142 Sum_probs=31.3
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
.|..++|.|||+|.+|..+|+.|...|. +++.+|.
T Consensus 143 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~ 177 (333)
T 1j4a_A 143 EVRDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDI 177 (333)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred cCCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECC
Confidence 5889999999999999999999999997 5777774
No 274
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=85.20 E-value=0.66 Score=46.45 Aligned_cols=36 Identities=17% Similarity=0.224 Sum_probs=32.2
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
+...+|+|+|+|++|..+++.+...|. +++++|...
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~ 205 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRP 205 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCH
Confidence 568999999999999999999999998 799998543
No 275
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=85.14 E-value=0.7 Score=45.04 Aligned_cols=36 Identities=14% Similarity=0.122 Sum_probs=31.9
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.|..++|.|||+|.+|..+|+.|...|. +++++|..
T Consensus 161 ~l~g~~vgIIG~G~iG~~vA~~l~~~G~-~V~~~dr~ 196 (333)
T 3ba1_A 161 KFSGKRVGIIGLGRIGLAVAERAEAFDC-PISYFSRS 196 (333)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTC-CEEEECSS
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCC
Confidence 5788999999999999999999999997 58888754
No 276
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=85.14 E-value=1.8 Score=42.27 Aligned_cols=32 Identities=22% Similarity=0.319 Sum_probs=29.1
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEe
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD 50 (456)
..+|+|+|+|++|..++..+-..|.+.+..+|
T Consensus 180 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~ 211 (363)
T 3m6i_A 180 GDPVLICGAGPIGLITMLCAKAAGACPLVITD 211 (363)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEC
Confidence 57899999999999999999999999888887
No 277
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=85.12 E-value=0.67 Score=45.06 Aligned_cols=36 Identities=19% Similarity=0.326 Sum_probs=32.0
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.|..++|.|||+|.+|..+|+.|...|. +++.+|..
T Consensus 152 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~ 187 (330)
T 2gcg_A 152 GLTQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTGR 187 (330)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEESS
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCC
Confidence 5888999999999999999999999997 58888843
No 278
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=85.08 E-value=0.69 Score=45.18 Aligned_cols=35 Identities=17% Similarity=0.258 Sum_probs=30.9
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKV 54 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v 54 (456)
...|+|||+|..|+.+|..|++.|. +++|+|....
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~-~V~vie~~~~ 37 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGV-KTLLVDAFDP 37 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCCC
Confidence 3579999999999999999999997 5999997654
No 279
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=85.07 E-value=0.83 Score=45.35 Aligned_cols=35 Identities=20% Similarity=0.282 Sum_probs=32.0
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCC-cEEEEeCCc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIG-SITVIDGSK 53 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~-~itlvD~d~ 53 (456)
+.+|+|||.|..|..+|..|.+.|.. ++|++|...
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~ 36 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEK 36 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSS
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCC
Confidence 36899999999999999999999985 899999866
No 280
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=84.99 E-value=0.78 Score=43.86 Aligned_cols=32 Identities=13% Similarity=0.192 Sum_probs=28.3
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
-.++|.|||+|-.|+-+|.+|+ +|. .++++|.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~-~V~v~d~ 42 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKH-EVVLQDV 42 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTS-EEEEECS
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCC-EEEEEEC
Confidence 3689999999999999999999 998 6888873
No 281
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=84.98 E-value=0.59 Score=43.86 Aligned_cols=41 Identities=17% Similarity=0.202 Sum_probs=32.2
Q ss_pred HHHHHHHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 11 EQGQAALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 11 ~~~q~~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
+..+..|++++|+|.| .||+|.++++.|+..|.. +.++|.+
T Consensus 2 p~~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~-V~~~~r~ 43 (281)
T 3s55_A 2 PGSMADFEGKTALITGGARGMGRSHAVALAEAGAD-IAICDRC 43 (281)
T ss_dssp ----CTTTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECC
T ss_pred CCcccccCCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCC
Confidence 4455678889999998 688999999999999975 8888754
No 282
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=84.92 E-value=0.82 Score=43.30 Aligned_cols=32 Identities=19% Similarity=0.348 Sum_probs=28.1
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
..+|.|||+|.+|+.++++|...|. +++++|.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~ 35 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGV-TVYAFDL 35 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTC-EEEEECS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCC-eEEEEeC
Confidence 3589999999999999999999997 5888874
No 283
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=84.91 E-value=0.76 Score=44.33 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=32.6
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
.|..++|.|||+|.+|..+|+.|...|. +++.+|...
T Consensus 141 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~ 177 (311)
T 2cuk_A 141 DLQGLTLGLVGMGRIGQAVAKRALAFGM-RVVYHARTP 177 (311)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHCCC-EEEEECCCC
Confidence 5888999999999999999999999996 588888543
No 284
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=84.90 E-value=0.67 Score=44.65 Aligned_cols=33 Identities=18% Similarity=0.378 Sum_probs=30.2
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
...|+|||.|..|..+|..|++.|. +++|+|..
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~G~-~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAGGH-EVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 3579999999999999999999998 69999976
No 285
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=84.88 E-value=1.2 Score=41.58 Aligned_cols=38 Identities=16% Similarity=0.171 Sum_probs=31.7
Q ss_pred HHHHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 14 QAALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 14 q~~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
+..|++++|+|.| .||+|.++++.|+..|.. +.++|..
T Consensus 5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~~~ 43 (287)
T 3pxx_A 5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGAD-IILFDIC 43 (287)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECC
T ss_pred ccccCCCEEEEeCCCChHHHHHHHHHHHCCCe-EEEEccc
Confidence 3467888999998 678999999999999974 8888754
No 286
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=84.85 E-value=1.3 Score=41.68 Aligned_cols=34 Identities=15% Similarity=0.305 Sum_probs=22.6
Q ss_pred hcCcEEEEcCChhHHHHHHHHHH-cCCCcEEEEeCCc
Q 012768 18 EKASVCLLNCGPTGSETLKNLVL-GGIGSITVIDGSK 53 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl-~Gv~~itlvD~d~ 53 (456)
...+||++|||+ |.- +..+++ .|+.+++.+|-|.
T Consensus 75 ~~~~VLdiG~G~-G~~-~~~l~~~~~~~~v~~vEid~ 109 (275)
T 1iy9_A 75 NPEHVLVVGGGD-GGV-IREILKHPSVKKATLVDIDG 109 (275)
T ss_dssp SCCEEEEESCTT-CHH-HHHHTTCTTCSEEEEEESCH
T ss_pred CCCEEEEECCch-HHH-HHHHHhCCCCceEEEEECCH
Confidence 457899999874 222 233333 4899999998443
No 287
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=84.84 E-value=0.75 Score=44.79 Aligned_cols=35 Identities=11% Similarity=0.084 Sum_probs=31.2
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
.|...+|.|||+|.+|..+|+.|...|. +++.+|.
T Consensus 147 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~ 181 (334)
T 2dbq_A 147 DVYGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSR 181 (334)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECC
Confidence 5788999999999999999999999996 5888874
No 288
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=84.83 E-value=1.7 Score=41.42 Aligned_cols=32 Identities=19% Similarity=0.234 Sum_probs=21.8
Q ss_pred hcCcEEEEcCChh--HHHHHHHHHHcCCCcEEEEeCC
Q 012768 18 EKASVCLLNCGPT--GSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 18 ~~~~VlIiG~ggl--G~eiaknLvl~Gv~~itlvD~d 52 (456)
...+||++|||+- ..++++ ..++.+++.+|-|
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~---~~~~~~V~~VDid 116 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTR---HKNVESITMVEID 116 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHT---CTTCCEEEEECSC
T ss_pred CCCEEEEEeCChhHHHHHHHh---CCCCCEEEEEECC
Confidence 3579999998643 333333 3578999999843
No 289
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=84.82 E-value=2 Score=41.49 Aligned_cols=32 Identities=16% Similarity=0.317 Sum_probs=24.6
Q ss_pred cCcEEEEcCChhHHHHHHHHH-H-cCCCcEEEEe
Q 012768 19 KASVCLLNCGPTGSETLKNLV-L-GGIGSITVID 50 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLv-l-~Gv~~itlvD 50 (456)
..+|.|||+|.+|...++.|. . .|+.-+.++|
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d 41 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACA 41 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEEC
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEec
Confidence 458999999999999999988 4 4554345555
No 290
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=84.79 E-value=5.3 Score=38.81 Aligned_cols=32 Identities=16% Similarity=0.095 Sum_probs=27.3
Q ss_pred CcEEEEcC-ChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 20 ASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 20 ~~VlIiG~-gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.+|+|.|+ |.+|+.+++.|+..|. +++++|..
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~r~ 61 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR 61 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC
Confidence 57999995 8899999999999995 68887754
No 291
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=84.73 E-value=2 Score=39.87 Aligned_cols=34 Identities=18% Similarity=0.240 Sum_probs=28.8
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 17 LEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 17 L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
|+++.|+|.| .||+|.++++.|+..|.. +.++|.
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~~-V~~~~r 40 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGAA-VAFCAR 40 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeC
Confidence 5678899998 688999999999999985 777763
No 292
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=84.68 E-value=0.87 Score=41.91 Aligned_cols=35 Identities=23% Similarity=0.411 Sum_probs=30.1
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 17 LEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 17 L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
|++++|+|.| .||+|.++++.|+..|...+.++|.
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r 38 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDR 38 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEES
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEec
Confidence 5677899998 6889999999999999877888763
No 293
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=84.66 E-value=0.72 Score=45.73 Aligned_cols=35 Identities=20% Similarity=0.466 Sum_probs=31.3
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKV 54 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v 54 (456)
+..|+|||+|..|+.+|..|++.|+ +++|+|.+..
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~-~V~v~E~~~~ 39 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGF-KVKIVEKQKF 39 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTC-CEEEECSSCS
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCCC
Confidence 4689999999999999999999998 6999997753
No 294
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=84.66 E-value=0.77 Score=45.37 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=31.1
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
...+|+|||+|..|..+|..|.+.|+ +++|+|...
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~-~v~v~E~~~ 38 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGV-DVDVYERSP 38 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence 35689999999999999999999998 699998654
No 295
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=84.65 E-value=3.8 Score=39.31 Aligned_cols=32 Identities=22% Similarity=0.238 Sum_probs=24.8
Q ss_pred CcEEEEcCChhHHHHHHHHHHc-CCCcEEEEeC
Q 012768 20 ASVCLLNCGPTGSETLKNLVLG-GIGSITVIDG 51 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~-Gv~~itlvD~ 51 (456)
.+|.|||+|.+|...++.|... |+.-+.++|.
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~ 36 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADA 36 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECC
Confidence 4899999999999999999875 5443345653
No 296
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=84.61 E-value=1.5 Score=40.73 Aligned_cols=32 Identities=16% Similarity=0.214 Sum_probs=26.0
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEE-EeCC
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITV-IDGS 52 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itl-vD~d 52 (456)
.||.|+|+|.+|..+++.+...+- .++- +|.+
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~~ 36 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGH-EIVGVIENT 36 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEECSS
T ss_pred eEEEEECcCHHHHHHHHHHHhCCC-EEEEEEecC
Confidence 589999999999999999998765 5554 5643
No 297
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=84.53 E-value=0.81 Score=44.53 Aligned_cols=38 Identities=13% Similarity=0.084 Sum_probs=33.0
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 15 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 15 ~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
..|..++|.|||+|.+|..+|+.|...|.. ++.+|...
T Consensus 142 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~-V~~~d~~~ 179 (331)
T 1xdw_A 142 KEVRNCTVGVVGLGRIGRVAAQIFHGMGAT-VIGEDVFE 179 (331)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSC
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCE-EEEECCCc
Confidence 358899999999999999999999999974 88888543
No 298
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=84.53 E-value=0.87 Score=41.97 Aligned_cols=32 Identities=19% Similarity=0.398 Sum_probs=28.5
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCC---CcEEEEeC
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGI---GSITVIDG 51 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv---~~itlvD~ 51 (456)
.+|.|||+|.+|..++++|...|. ..++++|.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r 37 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDL 37 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECS
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeC
Confidence 589999999999999999999997 47888873
No 299
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=84.52 E-value=2.4 Score=41.25 Aligned_cols=76 Identities=14% Similarity=0.172 Sum_probs=49.7
Q ss_pred CcEEEEc-CChhHHHHHHHHHHcCC-Cc-----EEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhC-CCCEE
Q 012768 20 ASVCLLN-CGPTGSETLKNLVLGGI-GS-----ITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELN-DAVKA 91 (456)
Q Consensus 20 ~~VlIiG-~gglG~eiaknLvl~Gv-~~-----itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~ln-p~v~v 91 (456)
.+|+|+| +|.+|+.++-.|+..|+ +. +.|+|-.. .+.|++..+.-|.... |.+.-
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~-----------------~~~~~~g~a~DL~~~~~~~~~~ 66 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITP-----------------MMGVLDGVLMELQDCALPLLKD 66 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGG-----------------GHHHHHHHHHHHHHTCCTTEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCC-----------------ccccchhhHhhhHhhhhcccCC
Confidence 4799999 79999999999999988 45 99998321 1135666666676653 54421
Q ss_pred EEEecChhhhhcCCcCCCCCCcEEEEcC
Q 012768 92 KFIEEYPEALIEMNPPFFSQFTLVVATQ 119 (456)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~dvVi~~~ 119 (456)
..... ...+.++++|+||.+.
T Consensus 67 ~~~~~-------~~~~~~~daDvVvitA 87 (333)
T 5mdh_A 67 VIATD-------KEEIAFKDLDVAILVG 87 (333)
T ss_dssp EEEES-------CHHHHTTTCSEEEECC
T ss_pred EEEcC-------CcHHHhCCCCEEEEeC
Confidence 11111 1123467899999764
No 300
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=84.48 E-value=0.85 Score=43.08 Aligned_cols=31 Identities=26% Similarity=0.371 Sum_probs=27.6
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 21 SVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 21 ~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
+|.|||+|.+|+.++++|...|. +++++|.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTC-CEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 69999999999999999999997 58888743
No 301
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=84.45 E-value=1.1 Score=45.45 Aligned_cols=103 Identities=11% Similarity=0.131 Sum_probs=57.6
Q ss_pred hcCcEEEEcCChh--HHHHHHHHHHcC--CCcEEEEeCCcccccCCCccccccccccCcchHHHH---HHHHHHhCCCCE
Q 012768 18 EKASVCLLNCGPT--GSETLKNLVLGG--IGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSV---CAFLQELNDAVK 90 (456)
Q Consensus 18 ~~~~VlIiG~ggl--G~eiaknLvl~G--v~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~---~~~l~~lnp~v~ 90 (456)
++.+|.|||+|++ |..++..|+..- .+.++|+|-+. .|++.. .+.+.+ ...+
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~geV~L~Di~~-------------------e~le~~~~~~~~l~~--~~~~ 62 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSGTVALYDLDF-------------------EAAQKNEVIGNHSGN--GRWR 62 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCEEEEEECSSH-------------------HHHHHHHHHHTTSTT--SCEE
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCCeEEEEeCCH-------------------HHHHHHHHHHHHHhc--cCCe
Confidence 4569999999997 689999888622 24899998442 122111 111221 2344
Q ss_pred EEEEecChhhhhcCCcCCCCCCcEEEEcCCC--hHHHHHHHHHHHHcCCeEEEEeecccee
Q 012768 91 AKFIEEYPEALIEMNPPFFSQFTLVVATQLG--EEKMIKLDRICREANVMLIFARSYGLTG 149 (456)
Q Consensus 91 v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~--~~~~~~l~~~~~~~~ip~i~~~~~G~~G 149 (456)
++... +. .+.++++|+||.+... .+.+..=-++.+++|+.=-.+.+.|..|
T Consensus 63 I~~Tt-D~-------~eAl~dADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GG 115 (450)
T 3fef_A 63 YEAVS-TL-------KKALSAADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGG 115 (450)
T ss_dssp EEEES-SH-------HHHHTTCSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHH
T ss_pred EEEEC-CH-------HHHhcCCCEEEeccccCCcccchhhhhhhhccCccccchhhcCCch
Confidence 44322 11 2346789999988743 3444433446677765211125555444
No 302
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=84.45 E-value=0.69 Score=46.48 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=30.3
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
.+|+|||+|..|..+|..|++.|+ +++|+|...
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~-~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDV-DVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTC-EEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCC-eEEEEcCCC
Confidence 689999999999999999999998 699999764
No 303
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=84.36 E-value=0.85 Score=40.74 Aligned_cols=30 Identities=30% Similarity=0.257 Sum_probs=26.8
Q ss_pred cEEEEc-CChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 21 SVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 21 ~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
+|+|+| +|.+|+.+++.|...|. +++++|.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~-~V~~~~r 32 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSR 32 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTC-EEEEEES
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 699999 99999999999999996 6888774
No 304
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=84.35 E-value=1.7 Score=40.14 Aligned_cols=35 Identities=17% Similarity=0.236 Sum_probs=28.9
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 16 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 16 ~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
.+++++|+|.| .||+|.++++.|+..|. ++.++|.
T Consensus 4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r 39 (252)
T 3h7a_A 4 TPRNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRR 39 (252)
T ss_dssp -CCSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 35678899998 67899999999999998 5888763
No 305
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=84.33 E-value=4.2 Score=38.90 Aligned_cols=32 Identities=13% Similarity=0.145 Sum_probs=25.4
Q ss_pred cEEEEcCChhHHHH-HHHHHHcCCCcEEEEeCC
Q 012768 21 SVCLLNCGPTGSET-LKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 21 ~VlIiG~gglG~ei-aknLvl~Gv~~itlvD~d 52 (456)
+|.|||+|.+|... ++.|...|+.-+.++|.+
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~ 34 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTS 34 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSC
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCC
Confidence 69999999999998 888888666545566643
No 306
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=84.31 E-value=0.74 Score=45.69 Aligned_cols=36 Identities=25% Similarity=0.215 Sum_probs=32.3
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
+..++|+|+|+|.+|..+++.+...|. +++++|...
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~ 217 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRP 217 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSG
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 477899999999999999999999998 699998554
No 307
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=84.23 E-value=0.87 Score=44.75 Aligned_cols=34 Identities=24% Similarity=0.405 Sum_probs=30.4
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
+.+|+|||+|..|..+|..|.+.|+ +++|+|...
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~ 35 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGI-DNVILERQT 35 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTC-CEEEECSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence 3689999999999999999999998 599999654
No 308
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=84.20 E-value=2.3 Score=40.80 Aligned_cols=30 Identities=7% Similarity=0.203 Sum_probs=23.1
Q ss_pred cEEEEcCChhHHHHHHHHHHcC-CCcEEEEe
Q 012768 21 SVCLLNCGPTGSETLKNLVLGG-IGSITVID 50 (456)
Q Consensus 21 ~VlIiG~gglG~eiaknLvl~G-v~~itlvD 50 (456)
+|.|||+|.+|...++.|...+ +.-+.++|
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d 33 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHTSGEYQLVAIYS 33 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSEEEEEEEC
T ss_pred EEEEEeCCHHHHHHHHHHHhCCCeEEEEEEe
Confidence 7999999999999999998764 33233554
No 309
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=84.15 E-value=1.3 Score=42.76 Aligned_cols=93 Identities=12% Similarity=0.034 Sum_probs=53.7
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecChh
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYPE 99 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~~~ 99 (456)
-+|.|||+|+.|...++.| ..|+.=+.++|.+.- .+++.+++..++....++ ... +.+
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~------------------~~~~~~~~~~~~~~~~~~--~~~-~~~ 60 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPGVPE------------------EDLSKLEKAISEMNIKPK--KYN-NWW 60 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTT------------------CCCHHHHHHHHTTTCCCE--ECS-SHH
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecCCch------------------hhHHHHHHHHHHcCCCCc--ccC-CHH
Confidence 4899999999999888887 555544445553210 234444455555443233 222 333
Q ss_pred hhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEE
Q 012768 100 ALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLI 140 (456)
Q Consensus 100 ~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i 140 (456)
++.+. .+.|+|+.++.+ .....+...|.+.|++++
T Consensus 61 ~ll~~-----~~vD~V~I~tp~-~~H~~~~~~al~aGkhVl 95 (337)
T 3ip3_A 61 EMLEK-----EKPDILVINTVF-SLNGKILLEALERKIHAF 95 (337)
T ss_dssp HHHHH-----HCCSEEEECSSH-HHHHHHHHHHHHTTCEEE
T ss_pred HHhcC-----CCCCEEEEeCCc-chHHHHHHHHHHCCCcEE
Confidence 33211 147888877644 445566677778887643
No 310
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=84.13 E-value=3 Score=38.81 Aligned_cols=36 Identities=17% Similarity=0.207 Sum_probs=30.7
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 16 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 16 ~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.|+++.|+|.| .||+|.++++.|+..|. ++.++|..
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~ 44 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIA 44 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEecc
Confidence 57788899998 68899999999999998 57788753
No 311
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=84.02 E-value=0.87 Score=43.78 Aligned_cols=37 Identities=22% Similarity=0.270 Sum_probs=32.0
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 15 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 15 ~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
..|..++|.|||+|.+|..+|+.|...|. +++.+|..
T Consensus 138 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~ 174 (307)
T 1wwk_A 138 IELEGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPY 174 (307)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred cccCCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCC
Confidence 35889999999999999999999999996 57777743
No 312
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=84.02 E-value=2.6 Score=39.05 Aligned_cols=34 Identities=18% Similarity=0.273 Sum_probs=28.7
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEe
Q 012768 16 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 16 ~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD 50 (456)
.|.+++|+|.| .||+|.++++.|+..|. ++.++|
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~ 44 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVD 44 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEe
Confidence 46778899998 68899999999999996 477765
No 313
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=84.01 E-value=0.97 Score=41.90 Aligned_cols=37 Identities=11% Similarity=0.114 Sum_probs=29.9
Q ss_pred HHHHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 14 QAALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 14 q~~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
+..+++++|+|.| .||+|.++++.|+..|.. +.++|.
T Consensus 24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~r 61 (262)
T 3rkr_A 24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGAR-VVLTAR 61 (262)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred hhccCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEEC
Confidence 3456778899998 689999999999999975 777763
No 314
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=84.00 E-value=6.7 Score=35.15 Aligned_cols=36 Identities=14% Similarity=0.244 Sum_probs=31.5
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
...+++|+|+|+.|.+++..|...|..-+-++|++.
T Consensus 11 ~~k~v~IiGAGg~g~~v~~~l~~~~~~~vgfiDd~~ 46 (220)
T 4ea9_A 11 AIGGVVIIGGGGHAKVVIESLRACGETVAAIVDADP 46 (220)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC
T ss_pred CCCCEEEEcCCHHHHHHHHHHHhCCCEEEEEEeCCc
Confidence 345899999999999999999988888888999764
No 315
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=83.96 E-value=0.94 Score=43.33 Aligned_cols=32 Identities=28% Similarity=0.402 Sum_probs=28.6
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.+|.|||+|.+|+.++++|...|. .++++|.+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 679999999999999999999997 58888754
No 316
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=83.96 E-value=2.7 Score=38.88 Aligned_cols=40 Identities=8% Similarity=0.015 Sum_probs=32.9
Q ss_pred HHHHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCCcc
Q 012768 14 QAALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGSKV 54 (456)
Q Consensus 14 q~~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d~v 54 (456)
+-.+++++|+|.| .||+|.++++.|+..|. ++.++|.+.-
T Consensus 23 m~~~~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~ 63 (260)
T 3un1_A 23 MMRNQQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIK 63 (260)
T ss_dssp HHHTTCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCC
T ss_pred hhCcCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChh
Confidence 4567788899998 68899999999999997 5888886543
No 317
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=83.95 E-value=2.6 Score=39.33 Aligned_cols=36 Identities=11% Similarity=0.139 Sum_probs=30.5
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 17 LEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 17 L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
|+++.|+|.| .||+|.++++.|+..|. ++.++|.+.
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~ 40 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSA 40 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCC
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccc
Confidence 5678899998 68899999999999997 688887554
No 318
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=83.95 E-value=4.3 Score=38.68 Aligned_cols=34 Identities=12% Similarity=0.034 Sum_probs=24.6
Q ss_pred hcCcEEEEcCChhHHH-HHHHHHH-cCCCcEEEEeC
Q 012768 18 EKASVCLLNCGPTGSE-TLKNLVL-GGIGSITVIDG 51 (456)
Q Consensus 18 ~~~~VlIiG~gglG~e-iaknLvl-~Gv~~itlvD~ 51 (456)
+..+|.|||+|.+|.. +++.|.. .|+.-+.++|.
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~ 39 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSP 39 (319)
T ss_dssp -CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECS
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECC
Confidence 3468999999999996 8898875 45443346664
No 319
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=83.94 E-value=0.99 Score=43.99 Aligned_cols=37 Identities=16% Similarity=0.214 Sum_probs=32.3
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 15 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 15 ~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
..|..++|.|||+|.+|..+|+.|...|. ++..+|..
T Consensus 137 ~~l~g~tvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~ 173 (334)
T 2pi1_A 137 RELNRLTLGVIGTGRIGSRVAMYGLAFGM-KVLCYDVV 173 (334)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred eeccCceEEEECcCHHHHHHHHHHHHCcC-EEEEECCC
Confidence 35899999999999999999999999997 57777743
No 320
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=83.84 E-value=0.85 Score=44.16 Aligned_cols=35 Identities=17% Similarity=0.220 Sum_probs=31.4
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
.|..++|.|||+|.+|..+|+.|...|. +++.+|.
T Consensus 143 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~ 177 (320)
T 1gdh_A 143 KLDNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDT 177 (320)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECS
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECC
Confidence 5889999999999999999999998885 6888875
No 321
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=83.82 E-value=0.81 Score=48.25 Aligned_cols=36 Identities=25% Similarity=0.397 Sum_probs=32.7
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
+....|+|||.|..|..+|..|++.|+ +++|+|.+.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~-~V~LiEr~~ 56 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGH-DVTIYERSA 56 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCC-CEEEEcCCC
Confidence 556899999999999999999999998 699999874
No 322
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=83.81 E-value=2.4 Score=39.51 Aligned_cols=52 Identities=13% Similarity=0.197 Sum_probs=39.6
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCC
Q 012768 16 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELND 87 (456)
Q Consensus 16 ~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp 87 (456)
.|+++.++|-| .+|+|.++|+.|+..|.. +.++|.+ ..+++.+++.+++...
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~-Vv~~~~~-------------------~~~~~~~~~~i~~~g~ 56 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSI-VVAVELL-------------------EDRLNQIVQELRGMGK 56 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESC-------------------HHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCE-EEEEECC-------------------HHHHHHHHHHHHhcCC
Confidence 47888888888 689999999999999984 7777732 2366667777766554
No 323
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=83.78 E-value=4.3 Score=38.01 Aligned_cols=34 Identities=18% Similarity=0.285 Sum_probs=27.1
Q ss_pred cCcEEEEcC-ChhHHHHHHHHHHc-CCCcEEEEeCC
Q 012768 19 KASVCLLNC-GPTGSETLKNLVLG-GIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~-gglG~eiaknLvl~-Gv~~itlvD~d 52 (456)
+.+|+|.|+ |.+|+.+++.|... |-.+++++|..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~ 37 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIR 37 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESC
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 368999996 88999999999998 33468887743
No 324
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=83.78 E-value=0.26 Score=48.50 Aligned_cols=30 Identities=13% Similarity=0.090 Sum_probs=26.9
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 21 SVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 21 ~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
+|.|||+|.+|+.++.+|+.+|. .++++|.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~-~V~~~~r 46 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCR-EVCVWHM 46 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEE-EEEEECS
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 89999999999999999999985 5788764
No 325
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=83.75 E-value=0.85 Score=44.72 Aligned_cols=36 Identities=11% Similarity=0.172 Sum_probs=31.8
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.|..++|.|||+|.+|..+|+.|...|. +++.+|..
T Consensus 165 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~ 200 (347)
T 1mx3_A 165 RIRGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPY 200 (347)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTT
T ss_pred CCCCCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCC
Confidence 5889999999999999999999999997 57888753
No 326
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=83.75 E-value=2.1 Score=41.00 Aligned_cols=36 Identities=22% Similarity=0.374 Sum_probs=29.4
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHcCC------CcEEEEeCC
Q 012768 17 LEKASVCLLN-CGPTGSETLKNLVLGGI------GSITVIDGS 52 (456)
Q Consensus 17 L~~~~VlIiG-~gglG~eiaknLvl~Gv------~~itlvD~d 52 (456)
|...+|+|.| .|++|+.+++.|+..|. .+++++|..
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~ 54 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVF 54 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESS
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEcc
Confidence 4456899999 68899999999999993 578888754
No 327
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=83.70 E-value=1.6 Score=39.90 Aligned_cols=34 Identities=21% Similarity=0.254 Sum_probs=29.3
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEe
Q 012768 16 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 16 ~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD 50 (456)
++++++|+|.| .||+|.++++.|+..|.. +.++|
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G~~-V~~~~ 40 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREGAA-VVVAD 40 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEc
Confidence 46788899998 588999999999999975 77776
No 328
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=83.69 E-value=4 Score=40.30 Aligned_cols=78 Identities=10% Similarity=0.007 Sum_probs=49.6
Q ss_pred cCcEEEEc-CChhHHHHHHHHHHcCCC-c---EEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhC-CCCE-E
Q 012768 19 KASVCLLN-CGPTGSETLKNLVLGGIG-S---ITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELN-DAVK-A 91 (456)
Q Consensus 19 ~~~VlIiG-~gglG~eiaknLvl~Gv~-~---itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~ln-p~v~-v 91 (456)
..+|.|+| +|.+|..++-.|+..|+- . +.|+|-+. +.-..|++..+.-|+... |... +
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~---------------~~~~~~~~G~amDL~h~~~p~~~~v 96 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGS---------------ERSFQALEGVAMELEDSLYPLLREV 96 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECC---------------GGGHHHHHHHHHHHHTTTCTTEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCc---------------cchhhhhHHHHHhHHhhhhhhcCCc
Confidence 35799999 799999999999998883 3 77776332 112234555555666554 4332 2
Q ss_pred EEEecChhhhhcCCcCCCCCCcEEEEcC
Q 012768 92 KFIEEYPEALIEMNPPFFSQFTLVVATQ 119 (456)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~dvVi~~~ 119 (456)
.... .+.+.+++.|+||.+.
T Consensus 97 ~i~~--------~~y~~~~daDvVVita 116 (375)
T 7mdh_A 97 SIGI--------DPYEVFEDVDWALLIG 116 (375)
T ss_dssp EEES--------CHHHHTTTCSEEEECC
T ss_pred EEec--------CCHHHhCCCCEEEEcC
Confidence 2211 1233477899999764
No 329
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=83.69 E-value=3.1 Score=40.43 Aligned_cols=33 Identities=9% Similarity=0.031 Sum_probs=25.5
Q ss_pred cCcEEEEcCChhHHHHHHHHHHc-CCCcEEEEeC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLG-GIGSITVIDG 51 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~-Gv~~itlvD~ 51 (456)
.-+|.|||+|.+|...+++|... |+.-+.++|.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~ 38 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSR 38 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECS
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECC
Confidence 35899999999999999999876 5443445563
No 330
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=83.66 E-value=2.2 Score=40.20 Aligned_cols=34 Identities=12% Similarity=0.363 Sum_probs=22.8
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
...+||.+|||+ |. ++..++..|..+++.+|-+.
T Consensus 75 ~~~~VLdiG~G~-G~-~~~~l~~~~~~~v~~vDid~ 108 (281)
T 1mjf_A 75 KPKRVLVIGGGD-GG-TVREVLQHDVDEVIMVEIDE 108 (281)
T ss_dssp CCCEEEEEECTT-SH-HHHHHTTSCCSEEEEEESCH
T ss_pred CCCeEEEEcCCc-CH-HHHHHHhCCCCEEEEEECCH
Confidence 357899999874 22 23333434888999999554
No 331
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=83.66 E-value=0.93 Score=44.15 Aligned_cols=36 Identities=19% Similarity=0.222 Sum_probs=32.1
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.|..++|.|||+|.+|..+|+.|...|.. ++.+|..
T Consensus 142 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~~-V~~~d~~ 177 (333)
T 1dxy_A 142 ELGQQTVGVMGTGHIGQVAIKLFKGFGAK-VIAYDPY 177 (333)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSS
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCE-EEEECCC
Confidence 58899999999999999999999999974 7888854
No 332
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=83.65 E-value=1.2 Score=44.53 Aligned_cols=38 Identities=18% Similarity=0.245 Sum_probs=33.3
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC-Ccc
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG-SKV 54 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~-d~v 54 (456)
+....|+|||+|..|..+|..|++.|..+++|+|. +.+
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~ 59 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAP 59 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSST
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCC
Confidence 45678999999999999999999999448999997 554
No 333
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=83.58 E-value=1.9 Score=41.22 Aligned_cols=35 Identities=14% Similarity=0.195 Sum_probs=25.5
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHc-CCCcEEEEeC
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLG-GIGSITVIDG 51 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~-Gv~~itlvD~ 51 (456)
++.-+|.|||+|.+|...++.|... ++.=+.++|.
T Consensus 7 M~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~ 42 (304)
T 3bio_A 7 DKKIRAAIVGYGNIGRYALQALREAPDFEIAGIVRR 42 (304)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC
T ss_pred CCCCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcC
Confidence 4567999999999999999999873 4332225564
No 334
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=83.54 E-value=7.9 Score=36.50 Aligned_cols=32 Identities=34% Similarity=0.532 Sum_probs=26.6
Q ss_pred CcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 20 ASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 20 ~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.+|+|.| .|.+|+.+++.|...|. +++++|..
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 34 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGL-SVVVVDNL 34 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 4799998 58899999999999994 67777743
No 335
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=83.53 E-value=1.6 Score=39.78 Aligned_cols=34 Identities=15% Similarity=0.123 Sum_probs=29.0
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEe
Q 012768 16 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 16 ~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD 50 (456)
.+++.+|+|.| .||+|.++++.|+..|. ++.++|
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~ 45 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISG 45 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEc
Confidence 46788899998 68899999999999996 477776
No 336
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=83.52 E-value=1.7 Score=40.74 Aligned_cols=107 Identities=14% Similarity=0.116 Sum_probs=56.5
Q ss_pred cEEEEcC-ChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecChh
Q 012768 21 SVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYPE 99 (456)
Q Consensus 21 ~VlIiG~-gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~~~ 99 (456)
+|+|.|+ |.+|+.+++.|. .| .+++.+|... . .-..|+.. .+.+.+.++...+++-++.......
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g-~~V~~~~r~~--------~--~~~~D~~d--~~~~~~~~~~~~~d~vih~a~~~~~ 67 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PV-GNLIALDVHS--------K--EFCGDFSN--PKGVAETVRKLRPDVIVNAAAHTAV 67 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TT-SEEEEECTTC--------S--SSCCCTTC--HHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred eEEEECCCCHHHHHHHHHhh-cC-CeEEEecccc--------c--cccccCCC--HHHHHHHHHhcCCCEEEECcccCCH
Confidence 6999995 889999999999 78 4688777543 0 11223332 2334444444334333322110000
Q ss_pred hhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEEEeecccee
Q 012768 100 ALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGLTG 149 (456)
Q Consensus 100 ~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~~G 149 (456)
..... +.+-.+ ..+......+.+.|++.++.+|..++.+.+|
T Consensus 68 ~~~~~------~~~~~~--~~n~~~~~~l~~a~~~~~~~~v~~SS~~vy~ 109 (299)
T 1n2s_A 68 DKAES------EPELAQ--LLNATSVEAIAKAANETGAWVVHYSTDYVFP 109 (299)
T ss_dssp HHHTT------CHHHHH--HHHTHHHHHHHHHHTTTTCEEEEEEEGGGSC
T ss_pred hhhhc------CHHHHH--HHHHHHHHHHHHHHHHcCCcEEEEecccEEe
Confidence 00000 000000 0011224566678888888899998887766
No 337
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=83.51 E-value=1 Score=44.29 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=30.6
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcc
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKV 54 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v 54 (456)
..|+|||+|..|..+|..|++.|. +++|+|....
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~-~V~vlE~~~~ 38 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGH-RVLVLERHTF 38 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-CEEEEESSCT
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCCC
Confidence 579999999999999999999998 4999997654
No 338
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=83.44 E-value=1.1 Score=46.09 Aligned_cols=37 Identities=11% Similarity=0.309 Sum_probs=31.7
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCccc
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVE 55 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~ 55 (456)
+...|+|||.|.+|+.+|..|++.|.+ ++|+|.+.+.
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~G~~-V~llE~~~~~ 38 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGRGLS-VLMLEAQDLA 38 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTCC-EEEECSSSTT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCC-EEEEECCCCC
Confidence 356899999999999999999999985 9999976543
No 339
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=83.44 E-value=2.5 Score=39.31 Aligned_cols=35 Identities=14% Similarity=0.216 Sum_probs=29.6
Q ss_pred HHHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEe
Q 012768 15 AALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 15 ~~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD 50 (456)
..|++++|+|.| .|++|.++++.|+..|. +++++|
T Consensus 28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~ 63 (279)
T 1xg5_A 28 ERWRDRLALVTGASGGIGAAVARALVQQGL-KVVGCA 63 (279)
T ss_dssp GGGTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEE
Confidence 457888999998 68999999999999996 477765
No 340
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=83.42 E-value=3 Score=40.27 Aligned_cols=32 Identities=13% Similarity=0.155 Sum_probs=28.1
Q ss_pred CcEEEEcC-ChhHHHHHHHHHHcCCC------cEEEEeC
Q 012768 20 ASVCLLNC-GPTGSETLKNLVLGGIG------SITVIDG 51 (456)
Q Consensus 20 ~~VlIiG~-gglG~eiaknLvl~Gv~------~itlvD~ 51 (456)
.+|+|+|+ |.+|+.++..|+..|.. .+.++|.
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di 44 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEI 44 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcC
Confidence 58999997 99999999999998873 7889883
No 341
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=83.33 E-value=1.6 Score=45.53 Aligned_cols=35 Identities=9% Similarity=0.178 Sum_probs=30.4
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
.+.+|+|+|.|.+|..+++.|...|.. ++++|.+.
T Consensus 126 ~~~hviI~G~g~~g~~la~~L~~~~~~-vvvid~~~ 160 (565)
T 4gx0_A 126 TRGHILIFGIDPITRTLIRKLESRNHL-FVVVTDNY 160 (565)
T ss_dssp CCSCEEEESCCHHHHHHHHHTTTTTCC-EEEEESCH
T ss_pred cCCeEEEECCChHHHHHHHHHHHCCCC-EEEEECCH
Confidence 356899999999999999999999975 88888553
No 342
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=83.33 E-value=1 Score=42.43 Aligned_cols=33 Identities=15% Similarity=0.336 Sum_probs=30.0
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.+|+|||.|..|..+|..|.+.|..+++++|.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC
Confidence 369999999999999999999998679999975
No 343
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=83.20 E-value=1.3 Score=43.37 Aligned_cols=32 Identities=22% Similarity=0.296 Sum_probs=28.2
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEe
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD 50 (456)
..+|+|+|+|++|..++.-+...|.++++.+|
T Consensus 191 g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~ 222 (371)
T 1f8f_A 191 ASSFVTWGAGAVGLSALLAAKVCGASIIIAVD 222 (371)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEC
Confidence 46899999999999999888889998888886
No 344
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=83.18 E-value=6 Score=38.62 Aligned_cols=32 Identities=16% Similarity=0.189 Sum_probs=22.3
Q ss_pred cCcEEEEcCChhHHH-HHHHHHHc-CCCcEEEEe
Q 012768 19 KASVCLLNCGPTGSE-TLKNLVLG-GIGSITVID 50 (456)
Q Consensus 19 ~~~VlIiG~gglG~e-iaknLvl~-Gv~~itlvD 50 (456)
.-+|.|||+|.+|.. .+..|... |+.=..++|
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d 40 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVAS 40 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEEC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEc
Confidence 358999999999987 77777654 443333455
No 345
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=83.14 E-value=0.81 Score=47.47 Aligned_cols=35 Identities=14% Similarity=0.270 Sum_probs=27.1
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
.++.++|+|+|+||+|..+++.|+..|+ ++++++.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~~G~-~V~i~~R 395 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKEKGA-KVVIANR 395 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHHHCC--CEEEES
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 3667899999999999999999999998 7888763
No 346
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=83.13 E-value=1 Score=43.27 Aligned_cols=36 Identities=19% Similarity=0.252 Sum_probs=31.9
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.|..++|.|||+|.+|..+|+.|...|. ++..+|..
T Consensus 121 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~dr~ 156 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRT 156 (303)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCC
Confidence 5889999999999999999999999997 57788754
No 347
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=83.11 E-value=2.3 Score=38.85 Aligned_cols=33 Identities=15% Similarity=0.267 Sum_probs=28.4
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEe
Q 012768 17 LEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 17 L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD 50 (456)
|++++|+|.| .|++|.++++.|+..|. ++.++|
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~ 44 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGA-RVIIAD 44 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEe
Confidence 5678899998 68899999999999996 577776
No 348
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=83.08 E-value=1 Score=46.60 Aligned_cols=35 Identities=20% Similarity=0.322 Sum_probs=31.3
Q ss_pred cCcEEEEcCChhHHHHHHHHHH---cCCCcEEEEeCCcc
Q 012768 19 KASVCLLNCGPTGSETLKNLVL---GGIGSITVIDGSKV 54 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl---~Gv~~itlvD~d~v 54 (456)
..+|+|||.|..|..+|..|++ .|+ +++|+|.+.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~-~V~liE~~~~ 42 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQA-NITLIESAAI 42 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSC-EEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCC-EEEEECCCCC
Confidence 4689999999999999999999 998 6999997653
No 349
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=83.07 E-value=7.3 Score=35.06 Aligned_cols=99 Identities=15% Similarity=0.092 Sum_probs=51.1
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecC
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY 97 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~ 97 (456)
...+|+.+||| .|.-... |+.. ..+++.+|.+ ....+.+++.+....-.-.++....+
T Consensus 91 ~~~~vldiG~G-~G~~~~~-l~~~-~~~v~~vD~~-------------------~~~~~~a~~~~~~~~~~~~~~~~~~d 148 (248)
T 2yvl_A 91 KEKRVLEFGTG-SGALLAV-LSEV-AGEVWTFEAV-------------------EEFYKTAQKNLKKFNLGKNVKFFNVD 148 (248)
T ss_dssp TTCEEEEECCT-TSHHHHH-HHHH-SSEEEEECSC-------------------HHHHHHHHHHHHHTTCCTTEEEECSC
T ss_pred CCCEEEEeCCC-ccHHHHH-HHHh-CCEEEEEecC-------------------HHHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 45789999998 4554443 3333 4678888732 23455555666554321223333332
Q ss_pred hhhhhcCCcCCCCCCcEEEEcCCCh-HHHHHHHHHHHHcCCeEEEE
Q 012768 98 PEALIEMNPPFFSQFTLVVATQLGE-EKMIKLDRICREANVMLIFA 142 (456)
Q Consensus 98 ~~~~~~~~~~~~~~~dvVi~~~~~~-~~~~~l~~~~~~~~ip~i~~ 142 (456)
..... .. -..||+|++..... .....+.+..+..+.-++..
T Consensus 149 ~~~~~--~~--~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 190 (248)
T 2yvl_A 149 FKDAE--VP--EGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLL 190 (248)
T ss_dssp TTTSC--CC--TTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEE
T ss_pred hhhcc--cC--CCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence 21110 00 13699999765443 44555555555555444433
No 350
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=83.05 E-value=0.95 Score=46.03 Aligned_cols=35 Identities=31% Similarity=0.301 Sum_probs=30.6
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
..++|+|+|+|++|..+++.|+..|. +++++|.+.
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~ 36 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTL 36 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCH
Confidence 45789999999999999999999995 599998654
No 351
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=83.04 E-value=1.2 Score=41.11 Aligned_cols=33 Identities=15% Similarity=0.145 Sum_probs=27.8
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEe
Q 012768 17 LEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 17 L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD 50 (456)
|.+++|+|.| .|++|.++++.|+..|. +++++|
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~ 45 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCA 45 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEe
Confidence 5667888888 68899999999999996 577776
No 352
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=83.02 E-value=1 Score=42.26 Aligned_cols=30 Identities=17% Similarity=0.221 Sum_probs=26.3
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
.+|.|||+|.+|+.++++|.. |. +++++|.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~ 31 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RF-PTLVWNR 31 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TS-CEEEECS
T ss_pred CeEEEEcccHHHHHHHHHHhC-CC-eEEEEeC
Confidence 379999999999999999999 87 5888863
No 353
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=82.99 E-value=4.7 Score=38.80 Aligned_cols=32 Identities=13% Similarity=0.082 Sum_probs=27.8
Q ss_pred CcEEEEcCChhHHH-HHHHHHHcCCCcEEEEeCC
Q 012768 20 ASVCLLNCGPTGSE-TLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 20 ~~VlIiG~gglG~e-iaknLvl~Gv~~itlvD~d 52 (456)
++|.++|.|+.|.. +|+.|...|.. +++.|..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~-V~~~D~~ 37 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFE-VSGCDAK 37 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCE-EEEEESS
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCE-EEEEcCC
Confidence 58999999999996 99999999974 8888853
No 354
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=82.91 E-value=0.95 Score=45.29 Aligned_cols=36 Identities=14% Similarity=0.242 Sum_probs=32.3
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
+...+|+|+|+|.+|..+++.+...|. +++++|...
T Consensus 188 v~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~ 223 (405)
T 4dio_A 188 VPAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRP 223 (405)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSST
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCH
Confidence 567999999999999999999999998 699998543
No 355
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=82.89 E-value=0.91 Score=44.56 Aligned_cols=37 Identities=19% Similarity=0.244 Sum_probs=32.2
Q ss_pred cCcEEEEcCChhHHHHHHHHHH-cCCCcEEEEeCCccc
Q 012768 19 KASVCLLNCGPTGSETLKNLVL-GGIGSITVIDGSKVE 55 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl-~Gv~~itlvD~d~v~ 55 (456)
...|+|||+|..|..+|..|++ .|..+++|+|...+.
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~~ 58 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLA 58 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSSTT
T ss_pred cCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCCC
Confidence 4689999999999999999999 995579999976643
No 356
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=82.85 E-value=1.7 Score=44.45 Aligned_cols=76 Identities=16% Similarity=0.238 Sum_probs=45.3
Q ss_pred cEEEEcCChhHH--HHHHHHH----HcC-CCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEE
Q 012768 21 SVCLLNCGPTGS--ETLKNLV----LGG-IGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKF 93 (456)
Q Consensus 21 ~VlIiG~gglG~--eiaknLv----l~G-v~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~ 93 (456)
||.|||+|++|. +++..|+ ++| ...|.|+|-|. ..+ +..+..+.+.....++.++++.
T Consensus 2 KI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~---~rl------------~~~~~~~~~~~~~~~~~~~i~~ 66 (477)
T 3u95_A 2 KISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHE---RRL------------NASYILARKYVEELNSPVKVVK 66 (477)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCH---HHH------------HHHHHHHHHHHHHHTCCCEEEE
T ss_pred EEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCH---HHH------------HHHHHHHHHHHHHcCCCeEEEE
Confidence 699999999874 3444444 344 35799998332 100 0112234455566778888776
Q ss_pred EecChhhhhcCCcCCCCCCcEEEEcC
Q 012768 94 IEEYPEALIEMNPPFFSQFTLVVATQ 119 (456)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~dvVi~~~ 119 (456)
.... .+-++++|+||.+.
T Consensus 67 t~d~--------~eAl~gAD~Vi~~~ 84 (477)
T 3u95_A 67 TESL--------DEAIEGADFIINTA 84 (477)
T ss_dssp ESCH--------HHHHTTCSEEEECC
T ss_pred eCCH--------HHHhCCCCEEEECc
Confidence 4421 12356899999875
No 357
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=82.78 E-value=0.83 Score=46.04 Aligned_cols=35 Identities=20% Similarity=0.351 Sum_probs=31.2
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCC-cEEEEeCC
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIG-SITVIDGS 52 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~-~itlvD~d 52 (456)
...+|+|||+|..|..+|..|.+.|.. +++++|..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~ 40 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERR 40 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecC
Confidence 356899999999999999999999974 79999965
No 358
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=82.70 E-value=1.2 Score=42.19 Aligned_cols=35 Identities=17% Similarity=0.262 Sum_probs=31.2
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
...+|+|||+|..|..+|..|.+.|.. ++|+|...
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~-v~vie~~~ 55 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIK-PILYEGMM 55 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC-CEEECCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCC-EEEEecCC
Confidence 457899999999999999999999985 99999754
No 359
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=82.70 E-value=0.98 Score=44.24 Aligned_cols=36 Identities=14% Similarity=0.104 Sum_probs=31.4
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHH-HcCCCcEEEEeCC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLV-LGGIGSITVIDGS 52 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLv-l~Gv~~itlvD~d 52 (456)
.|..++|.|||+|.+|..+|+.|. ..|. +++.+|..
T Consensus 160 ~l~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~ 196 (348)
T 2w2k_A 160 NPRGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVA 196 (348)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSS
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCC
Confidence 488899999999999999999999 8887 58888743
No 360
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=82.68 E-value=1.4 Score=42.34 Aligned_cols=42 Identities=17% Similarity=0.200 Sum_probs=31.9
Q ss_pred CHHHHHHHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 10 GEQGQAALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 10 G~~~q~~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
|+..+..|+++.|+|.| .||+|.++|+.|+..|. ++.++|.+
T Consensus 18 ~p~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~ 60 (322)
T 3qlj_A 18 GPGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIG 60 (322)
T ss_dssp ----CCTTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCC
T ss_pred CCchhcccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCc
Confidence 33445567888888888 68899999999999997 68888754
No 361
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=82.65 E-value=1.1 Score=44.39 Aligned_cols=35 Identities=20% Similarity=0.247 Sum_probs=31.4
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
.|..++|.|||+|.+|..+|+.|...|. ++..+|.
T Consensus 113 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~ 147 (380)
T 2o4c_A 113 DLAERTYGVVGAGQVGGRLVEVLRGLGW-KVLVCDP 147 (380)
T ss_dssp CGGGCEEEEECCSHHHHHHHHHHHHTTC-EEEEECH
T ss_pred ccCCCEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcC
Confidence 5889999999999999999999999997 5777774
No 362
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=82.64 E-value=2.8 Score=42.69 Aligned_cols=35 Identities=20% Similarity=0.107 Sum_probs=27.4
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHcCC--CcEEEEeC
Q 012768 17 LEKASVCLLN-CGPTGSETLKNLVLGGI--GSITVIDG 51 (456)
Q Consensus 17 L~~~~VlIiG-~gglG~eiaknLvl~Gv--~~itlvD~ 51 (456)
.+..+|+|.| .|.+|+++++.|...+- .++++++.
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R 108 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVR 108 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 3567899999 58899999999998831 46777764
No 363
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=82.62 E-value=1.1 Score=42.38 Aligned_cols=31 Identities=32% Similarity=0.418 Sum_probs=27.6
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
.+|.|||+|.+|..++++|...|. +++++|.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~ 36 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGY-SLVVSDR 36 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECS
T ss_pred ceEEEECchHHHHHHHHHHHhCCC-EEEEEeC
Confidence 489999999999999999999996 5888774
No 364
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=82.61 E-value=1.9 Score=41.62 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=29.4
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.+..|+|||+|..|+.+|..|+ .|. +++|+|..
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~G~-~V~vlE~~ 40 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-AHG-RVVVLERE 40 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-TTS-CEEEECSS
T ss_pred CcCCEEEECCcHHHHHHHHHHh-CCC-CEEEEECC
Confidence 4678999999999999999999 586 69999976
No 365
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=82.60 E-value=2.2 Score=38.85 Aligned_cols=36 Identities=11% Similarity=0.214 Sum_probs=30.0
Q ss_pred HHHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 15 AALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 15 ~~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
..|++++|+|.| .||+|.++++.|+..|. ++.++|.
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r 46 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGR 46 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEec
Confidence 357788899998 58999999999999997 4777763
No 366
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=82.59 E-value=10 Score=33.14 Aligned_cols=77 Identities=9% Similarity=0.015 Sum_probs=42.8
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcC-CCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEec
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGG-IGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 96 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~G-v~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~ 96 (456)
...+|+-+|||. |. ++..|+..| -++++.+|.+. ...+.+++++...+- -+++.+..
T Consensus 40 ~~~~vLDiG~G~-G~-~~~~la~~~~~~~v~~vD~s~-------------------~~~~~a~~~~~~~~~-~~v~~~~~ 97 (204)
T 3e05_A 40 DDLVMWDIGAGS-AS-VSIEASNLMPNGRIFALERNP-------------------QYLGFIRDNLKKFVA-RNVTLVEA 97 (204)
T ss_dssp TTCEEEEETCTT-CH-HHHHHHHHCTTSEEEEEECCH-------------------HHHHHHHHHHHHHTC-TTEEEEEC
T ss_pred CCCEEEEECCCC-CH-HHHHHHHHCCCCEEEEEeCCH-------------------HHHHHHHHHHHHhCC-CcEEEEeC
Confidence 356899999985 54 344444444 57888888332 244555566655442 22344433
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCC
Q 012768 97 YPEALIEMNPPFFSQFTLVVATQL 120 (456)
Q Consensus 97 ~~~~~~~~~~~~~~~~dvVi~~~~ 120 (456)
+... .......||+|++...
T Consensus 98 d~~~----~~~~~~~~D~i~~~~~ 117 (204)
T 3e05_A 98 FAPE----GLDDLPDPDRVFIGGS 117 (204)
T ss_dssp CTTT----TCTTSCCCSEEEESCC
T ss_pred Chhh----hhhcCCCCCEEEECCC
Confidence 3211 1112357999997653
No 367
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=82.54 E-value=1 Score=44.17 Aligned_cols=37 Identities=14% Similarity=0.153 Sum_probs=32.1
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 15 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 15 ~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
..|..++|.|||+|.+|..+|+.|...|. ++..+|..
T Consensus 169 ~~l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~ 205 (345)
T 4g2n_A 169 MGLTGRRLGIFGMGRIGRAIATRARGFGL-AIHYHNRT 205 (345)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHTTTC-EEEEECSS
T ss_pred cccCCCEEEEEEeChhHHHHHHHHHHCCC-EEEEECCC
Confidence 35889999999999999999999999887 57777754
No 368
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=82.54 E-value=7 Score=36.97 Aligned_cols=71 Identities=11% Similarity=0.167 Sum_probs=39.2
Q ss_pred cCcEEEEcCChhHHHHHHHHHHc-CCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLG-GIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY 97 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~-Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~ 97 (456)
..+||-+|||. |... ..|+.. |. +++.+|.+ ....+.+.+++.+....-.++....+
T Consensus 91 ~~~vLDiGcG~-G~~~-~~la~~~~~-~v~gvD~s-------------------~~~~~~a~~~~~~~~~~~~v~~~~~d 148 (318)
T 2fk8_A 91 GMTLLDIGCGW-GTTM-RRAVERFDV-NVIGLTLS-------------------KNQHARCEQVLASIDTNRSRQVLLQG 148 (318)
T ss_dssp TCEEEEESCTT-SHHH-HHHHHHHCC-EEEEEESC-------------------HHHHHHHHHHHHTSCCSSCEEEEESC
T ss_pred cCEEEEEcccc-hHHH-HHHHHHCCC-EEEEEECC-------------------HHHHHHHHHHHHhcCCCCceEEEECC
Confidence 46899999976 4332 333333 65 78888732 22344455566554422234444433
Q ss_pred hhhhhcCCcCCCCCCcEEEEc
Q 012768 98 PEALIEMNPPFFSQFTLVVAT 118 (456)
Q Consensus 98 ~~~~~~~~~~~~~~~dvVi~~ 118 (456)
...+ + ..||+|++.
T Consensus 149 ~~~~----~---~~fD~v~~~ 162 (318)
T 2fk8_A 149 WEDF----A---EPVDRIVSI 162 (318)
T ss_dssp GGGC----C---CCCSEEEEE
T ss_pred hHHC----C---CCcCEEEEe
Confidence 3222 1 579999976
No 369
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=82.47 E-value=4.9 Score=38.98 Aligned_cols=86 Identities=21% Similarity=0.149 Sum_probs=51.5
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcC---------CCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGG---------IGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAV 89 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~G---------v~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v 89 (456)
.-+|.|+|+|.+|..+++.|.... +.=..+.|.+.-.. .+++ . .
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~-----------~~~~---------------~-~ 55 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKP-----------RAIP---------------Q-E 55 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSC-----------CSSC---------------G-G
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHh-----------hccC---------------c-c
Confidence 357999999999999999987653 33334455432110 0010 0 0
Q ss_pred EEEEEecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEEE
Q 012768 90 KAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFA 142 (456)
Q Consensus 90 ~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~ 142 (456)
. ...+-.+++ +.|+|+.|+.+..........|.++|+.++++
T Consensus 56 ~----------~~~d~~~ll-~iDvVve~t~~~~~a~~~~~~AL~aGKhVVta 97 (332)
T 2ejw_A 56 L----------LRAEPFDLL-EADLVVEAMGGVEAPLRLVLPALEAGIPLITA 97 (332)
T ss_dssp G----------EESSCCCCT-TCSEEEECCCCSHHHHHHHHHHHHTTCCEEEC
T ss_pred c----------ccCCHHHHh-CCCEEEECCCCcHHHHHHHHHHHHcCCeEEEC
Confidence 0 011123344 88999988766544455666778889987754
No 370
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=82.47 E-value=0.98 Score=43.41 Aligned_cols=30 Identities=27% Similarity=0.329 Sum_probs=27.3
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 21 SVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 21 ~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
+|.|||+|.+|+.++.+|...|. .++++|.
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~-~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCC-EEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCC-eEEEEEc
Confidence 69999999999999999999995 6888874
No 371
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=82.47 E-value=0.91 Score=45.07 Aligned_cols=36 Identities=17% Similarity=0.217 Sum_probs=32.1
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.+...+|+|+|+|++|..+++.+...|. +++++|..
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~ 204 (384)
T 1l7d_A 169 TVPPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVR 204 (384)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 4678999999999999999999999998 49999854
No 372
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=82.46 E-value=1.2 Score=44.29 Aligned_cols=35 Identities=23% Similarity=0.327 Sum_probs=31.4
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
.|..++|.|||+|.+|..+|+.|...|. ++..+|.
T Consensus 116 ~l~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~ 150 (381)
T 3oet_A 116 SLRDRTIGIVGVGNVGSRLQTRLEALGI-RTLLCDP 150 (381)
T ss_dssp CGGGCEEEEECCSHHHHHHHHHHHHTTC-EEEEECH
T ss_pred ccCCCEEEEEeECHHHHHHHHHHHHCCC-EEEEECC
Confidence 4889999999999999999999999998 5777774
No 373
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=82.43 E-value=1 Score=44.15 Aligned_cols=36 Identities=14% Similarity=0.139 Sum_probs=31.6
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 15 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 15 ~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
..|..++|.|||+|.+|..+|+.|...|. ++..+|.
T Consensus 156 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~ 191 (352)
T 3gg9_A 156 RVLKGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGR 191 (352)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred ccCCCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECC
Confidence 46889999999999999999999999997 5777763
No 374
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=82.38 E-value=1.1 Score=49.03 Aligned_cols=36 Identities=25% Similarity=0.472 Sum_probs=32.8
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKV 54 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v 54 (456)
...|+|||.|.+|+.+|..|++.|..+++|+|.+..
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPL 39 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCC
Confidence 578999999999999999999999878999998764
No 375
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=82.32 E-value=5.8 Score=39.98 Aligned_cols=36 Identities=22% Similarity=0.322 Sum_probs=32.8
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
|+.++|.|.|.|.+|..+++.|...|.+-+.+.|.+
T Consensus 233 l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~ 268 (440)
T 3aog_A 233 VEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHT 268 (440)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred ccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 678999999999999999999999998888788854
No 376
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=82.28 E-value=5.8 Score=38.03 Aligned_cols=36 Identities=11% Similarity=0.154 Sum_probs=26.4
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcC-CCcEEEEeCCc
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGG-IGSITVIDGSK 53 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~G-v~~itlvD~d~ 53 (456)
+.-+|.|||+|.+|...++.|...+ +.-+.++|.+.
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~ 40 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTL 40 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCS
T ss_pred CceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCH
Confidence 4568999999999999999998764 33334566544
No 377
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=82.26 E-value=1.1 Score=43.23 Aligned_cols=35 Identities=9% Similarity=0.228 Sum_probs=30.9
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHc-CCCcEEEEeC
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLG-GIGSITVIDG 51 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~-Gv~~itlvD~ 51 (456)
....+|.|||+|..|..++++|... |+.+++++|.
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr 168 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNR 168 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 3467899999999999999999987 8889999873
No 378
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=82.17 E-value=3 Score=39.78 Aligned_cols=34 Identities=12% Similarity=0.268 Sum_probs=26.8
Q ss_pred cCcEEEEcCChhHHHHHHHHHHc-CCCcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLG-GIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~-Gv~~itlvD~d 52 (456)
..+|.|||+|.+|...++.|... |+.-+.++|.+
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~ 44 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLASSN 44 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESC
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCC
Confidence 35899999999999999999885 55445577754
No 379
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=82.02 E-value=1.3 Score=41.74 Aligned_cols=33 Identities=18% Similarity=0.123 Sum_probs=30.0
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
..+|+|||.|..|..+|..|.+.|.. ++|+|..
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~-v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLK-TLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC-EEEEESS
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCc-EEEEecc
Confidence 45899999999999999999999975 9999976
No 380
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=81.98 E-value=8.9 Score=36.71 Aligned_cols=35 Identities=11% Similarity=0.160 Sum_probs=26.3
Q ss_pred hcCcEEEEcCChhHH-HHHHHHHHcCCCcEEEEeCC
Q 012768 18 EKASVCLLNCGPTGS-ETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 18 ~~~~VlIiG~gglG~-eiaknLvl~Gv~~itlvD~d 52 (456)
+.-+|.|||+|..|. ..+.+|...|+.=+.++|.+
T Consensus 3 ~~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~ 38 (336)
T 2p2s_A 3 KKIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESD 38 (336)
T ss_dssp -CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSC
T ss_pred CccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCC
Confidence 456899999999996 67888877777555677743
No 381
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=81.90 E-value=5.5 Score=37.98 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=26.7
Q ss_pred CcEEEEc-CChhHHHHHHHHHHcCC-CcEEEEeCC
Q 012768 20 ASVCLLN-CGPTGSETLKNLVLGGI-GSITVIDGS 52 (456)
Q Consensus 20 ~~VlIiG-~gglG~eiaknLvl~Gv-~~itlvD~d 52 (456)
.+|+|.| .|.+|+.+++.|+..|- .+++++|..
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~ 39 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKL 39 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 4799999 68899999999999953 368887753
No 382
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=81.88 E-value=1.2 Score=42.13 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=30.1
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
..+|+|||.|..|..+|..|.+.|. +++|+|...
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~-~v~lie~~~ 40 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQA-SVKIIESLP 40 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred cceEEEECCCHHHHHHHHHHHHCCC-CEEEEEcCC
Confidence 3589999999999999999999997 699998753
No 383
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=81.87 E-value=1.1 Score=43.69 Aligned_cols=35 Identities=20% Similarity=0.247 Sum_probs=30.8
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
.|..++|.|||+|.+|..+|+.|...|. ++..+|.
T Consensus 162 ~l~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~ 196 (335)
T 2g76_A 162 ELNGKTLGILGLGRIGREVATRMQSFGM-KTIGYDP 196 (335)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECS
T ss_pred CCCcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECC
Confidence 5889999999999999999999998885 5777773
No 384
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=81.86 E-value=4.7 Score=39.23 Aligned_cols=33 Identities=18% Similarity=0.107 Sum_probs=22.7
Q ss_pred cCcEEEEcCChhHHH-HHHHHHHc-CCCcEEEEeC
Q 012768 19 KASVCLLNCGPTGSE-TLKNLVLG-GIGSITVIDG 51 (456)
Q Consensus 19 ~~~VlIiG~gglG~e-iaknLvl~-Gv~~itlvD~ 51 (456)
.-+|.|||+|.+|.. .+..|... |+.=+.++|.
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~ 39 (358)
T 3gdo_A 5 TIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTS 39 (358)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECS
T ss_pred cceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcC
Confidence 458999999999986 67777544 4433345553
No 385
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=81.83 E-value=4.6 Score=36.43 Aligned_cols=102 Identities=12% Similarity=0.037 Sum_probs=52.6
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhC-CCCEEEEEec
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELN-DAVKAKFIEE 96 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~ln-p~v~v~~~~~ 96 (456)
...+||-+||| .|...+.-.-+.| ++++.+|.+. ..++.+++++.... +.+ +....
T Consensus 91 ~~~~vLdiG~G-~G~~~~~la~~~~-~~v~~vD~~~-------------------~~~~~a~~~~~~~~~~~v--~~~~~ 147 (235)
T 1jg1_A 91 PGMNILEVGTG-SGWNAALISEIVK-TDVYTIERIP-------------------ELVEFAKRNLERAGVKNV--HVILG 147 (235)
T ss_dssp TTCCEEEECCT-TSHHHHHHHHHHC-SCEEEEESCH-------------------HHHHHHHHHHHHTTCCSE--EEEES
T ss_pred CCCEEEEEeCC-cCHHHHHHHHHhC-CEEEEEeCCH-------------------HHHHHHHHHHHHcCCCCc--EEEEC
Confidence 45689999998 5655554444445 7899988332 34555556666543 233 33333
Q ss_pred ChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEEEeecc
Q 012768 97 YPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYG 146 (456)
Q Consensus 97 ~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G 146 (456)
+.. . ....-..||+|+++.........+.+.++..|.-++.+...+
T Consensus 148 d~~-~---~~~~~~~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 148 DGS-K---GFPPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPVGSYH 193 (235)
T ss_dssp CGG-G---CCGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEECSSS
T ss_pred Ccc-c---CCCCCCCccEEEECCcHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 221 0 111112589999764322222234444444455455554433
No 386
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=81.81 E-value=1.2 Score=42.00 Aligned_cols=30 Identities=17% Similarity=0.371 Sum_probs=27.1
Q ss_pred CcEEEEcC-ChhHHHHHHHHHHcCCCcEEEEe
Q 012768 20 ASVCLLNC-GPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 20 ~~VlIiG~-gglG~eiaknLvl~Gv~~itlvD 50 (456)
.+|.|||+ |.+|+.+++.|...|. +++++|
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~ 42 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIE 42 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS-EEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEE
Confidence 48999999 9999999999999996 677876
No 387
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=81.76 E-value=1.1 Score=47.66 Aligned_cols=35 Identities=17% Similarity=0.190 Sum_probs=28.1
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHc-CCCcEEEEeCC
Q 012768 17 LEKASVCLLN-CGPTGSETLKNLVLG-GIGSITVIDGS 52 (456)
Q Consensus 17 L~~~~VlIiG-~gglG~eiaknLvl~-Gv~~itlvD~d 52 (456)
++..+|+|.| .|.+|+++++.|... |. +++++|..
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~-~V~~~~r~ 349 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLREDHY-EVYGLDIG 349 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSSSE-EEEEEESC
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcCCC-EEEEEEcC
Confidence 4667899999 588999999999998 64 68887754
No 388
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=81.71 E-value=1.2 Score=43.87 Aligned_cols=34 Identities=21% Similarity=0.304 Sum_probs=30.3
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
..+|+|||+|..|..+|..|.+.|+. ++|+|...
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~-V~viE~~~ 39 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHR-VVVVEQAR 39 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC-EEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCc-EEEEeCCC
Confidence 35799999999999999999999985 99998653
No 389
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=81.68 E-value=1.3 Score=42.27 Aligned_cols=33 Identities=24% Similarity=0.353 Sum_probs=29.8
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
..+|+|||+|..|..+|..|.+.|. +++|+|..
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~-~v~lie~~ 37 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGL-SFRFVDPL 37 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCC
Confidence 4689999999999999999999997 69999964
No 390
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=81.64 E-value=1.3 Score=45.56 Aligned_cols=33 Identities=18% Similarity=0.409 Sum_probs=29.9
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
..+|+|||+|..|..+|..|++.|+ +++|+|..
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~G~-~V~liEk~ 124 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALLGA-RVVLVEKR 124 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCEEEECccHHHHHHHHHHHHCCC-eEEEEEec
Confidence 4679999999999999999999997 69999865
No 391
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=81.63 E-value=3.3 Score=38.60 Aligned_cols=37 Identities=16% Similarity=0.169 Sum_probs=31.2
Q ss_pred HHHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 15 AALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 15 ~~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
..|+++.|+|.| .||+|.++++.|+..|. ++.++|..
T Consensus 11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~ 48 (280)
T 3pgx_A 11 GSLQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDIC 48 (280)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecc
Confidence 457888999998 68899999999999997 57787754
No 392
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=81.63 E-value=1.3 Score=42.95 Aligned_cols=35 Identities=14% Similarity=0.250 Sum_probs=30.9
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHc-CCCcEEEEeC
Q 012768 17 LEKASVCLLN-CGPTGSETLKNLVLG-GIGSITVIDG 51 (456)
Q Consensus 17 L~~~~VlIiG-~gglG~eiaknLvl~-Gv~~itlvD~ 51 (456)
+++.+|+|.| .|++|+.+++.|+.. |..++++++.
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r 55 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSR 55 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEES
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 5678999999 588999999999999 9888998874
No 393
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=81.62 E-value=1.2 Score=46.19 Aligned_cols=35 Identities=17% Similarity=0.281 Sum_probs=31.4
Q ss_pred cCcEEEEcCChhHHHHHHHHHH---cCCCcEEEEeCCcc
Q 012768 19 KASVCLLNCGPTGSETLKNLVL---GGIGSITVIDGSKV 54 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl---~Gv~~itlvD~d~v 54 (456)
..+|+|||.|..|..+|..|++ .|+ +++|+|.+..
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~-~V~liE~~~~ 62 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTA-DITLLQAPDI 62 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSS-EEEEEECCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCC-cEEEEeCCCC
Confidence 5689999999999999999999 888 7999997654
No 394
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=81.61 E-value=0.59 Score=45.49 Aligned_cols=34 Identities=21% Similarity=0.191 Sum_probs=29.3
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCC------CcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGI------GSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv------~~itlvD~d 52 (456)
..+|.|||+|.+|+.++..|+..|. ..++++|.+
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~ 47 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFE 47 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcC
Confidence 3589999999999999999999993 468888754
No 395
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=81.60 E-value=4.4 Score=38.37 Aligned_cols=116 Identities=13% Similarity=0.123 Sum_probs=60.8
Q ss_pred hcCcEEEEcC-ChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEec
Q 012768 18 EKASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEE 96 (456)
Q Consensus 18 ~~~~VlIiG~-gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~ 96 (456)
++.+|+|+|+ |..|..++++|...|..-+..+|+...... ..|.+--..+.+.+.+-.+++-+-...
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g~~-----------~~G~~vy~sl~el~~~~~~D~viI~tP- 73 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTT-----------HLGLPVFNTVREAVAATGATASVIYVP- 73 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCE-----------ETTEEEESSHHHHHHHHCCCEEEECCC-
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccce-----------eCCeeccCCHHHHhhcCCCCEEEEecC-
Confidence 3578999998 889999999999999864445665422101 112211111223333334555443322
Q ss_pred ChhhhhcCCcCCC-CCCcEEEE-cC-CChHHHHHHHHHHHHcCCeEEEEeecc
Q 012768 97 YPEALIEMNPPFF-SQFTLVVA-TQ-LGEEKMIKLDRICREANVMLIFARSYG 146 (456)
Q Consensus 97 ~~~~~~~~~~~~~-~~~dvVi~-~~-~~~~~~~~l~~~~~~~~ip~i~~~~~G 146 (456)
+....+.-.+.. .+..++|+ +. .+......+.+.|+++++.++.-.+.|
T Consensus 74 -~~~~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~liGPNc~G 125 (288)
T 2nu8_A 74 -APFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPNTPG 125 (288)
T ss_dssp -GGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEECSSCCE
T ss_pred -HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCcc
Confidence 111110000111 24455443 32 344556688889999988766444443
No 396
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=81.59 E-value=2.5 Score=39.51 Aligned_cols=40 Identities=10% Similarity=0.060 Sum_probs=32.3
Q ss_pred HHHHHHHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 11 EQGQAALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 11 ~~~q~~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
......|++++|+|.| .||+|.++++.|+..|. ++.++|.
T Consensus 25 ~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 65 (275)
T 4imr_A 25 LETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGV 65 (275)
T ss_dssp HHHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccccCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcC
Confidence 3444567888899998 68999999999999998 5777763
No 397
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=81.57 E-value=4.4 Score=39.46 Aligned_cols=25 Identities=12% Similarity=0.150 Sum_probs=18.6
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHH
Q 012768 15 AALEKASVCLLNCGPTGSETLKNLV 39 (456)
Q Consensus 15 ~~L~~~~VlIiG~gglG~eiaknLv 39 (456)
..|++-||.|||+|.+|..-++.+.
T Consensus 21 ~~MkkirvgiIG~G~ig~~H~~a~~ 45 (393)
T 4fb5_A 21 QSMKPLGIGLIGTGYMGKCHALAWN 45 (393)
T ss_dssp ---CCCEEEEECCSHHHHHHHHHHT
T ss_pred cCCCCccEEEEcCCHHHHHHHHHHH
Confidence 4577789999999999987776654
No 398
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=81.56 E-value=1.8 Score=42.51 Aligned_cols=32 Identities=22% Similarity=0.326 Sum_probs=29.3
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEe
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD 50 (456)
..+|+|+|+|++|..++.-+...|.++++.+|
T Consensus 194 g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~ 225 (378)
T 3uko_A 194 GSNVAIFGLGTVGLAVAEGAKTAGASRIIGID 225 (378)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHHTCSCEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEc
Confidence 57899999999999999999999999899887
No 399
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=81.52 E-value=2.3 Score=41.50 Aligned_cols=81 Identities=14% Similarity=0.171 Sum_probs=49.5
Q ss_pred HHhcCcEEEEcC-ChhHHHHHHHHHHcCC-C-----cEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCC
Q 012768 16 ALEKASVCLLNC-GPTGSETLKNLVLGGI-G-----SITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDA 88 (456)
Q Consensus 16 ~L~~~~VlIiG~-gglG~eiaknLvl~Gv-~-----~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~ 88 (456)
.+..-||.|+|+ |++|..++-.|+...+ + .+.|+|-. -+..+++-.+--|+.....
T Consensus 21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~-----------------~~~~~~~Gva~DL~~~~~~ 83 (345)
T 4h7p_A 21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIE-----------------PALKALAGVEAELEDCAFP 83 (345)
T ss_dssp -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCG-----------------GGHHHHHHHHHHHHHTTCT
T ss_pred CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCC-----------------CccccchhhhhhhhhcCcc
Confidence 455669999996 9999999998887654 3 68888721 1223445555556665433
Q ss_pred CEEEEEecChhhhhcCCcCCCCCCcEEEEcC
Q 012768 89 VKAKFIEEYPEALIEMNPPFFSQFTLVVATQ 119 (456)
Q Consensus 89 v~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~ 119 (456)
......... +..+.+++.|+||.+.
T Consensus 84 ~~~~~~~~~------~~~~a~~~advVvi~a 108 (345)
T 4h7p_A 84 LLDKVVVTA------DPRVAFDGVAIAIMCG 108 (345)
T ss_dssp TEEEEEEES------CHHHHTTTCSEEEECC
T ss_pred CCCcEEEcC------ChHHHhCCCCEEEECC
Confidence 333322211 1123477899999764
No 400
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=81.52 E-value=1.3 Score=45.47 Aligned_cols=37 Identities=24% Similarity=0.423 Sum_probs=31.7
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 15 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 15 ~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
++-....|+|||+|..|..+|..|.+.|+. ++|+|..
T Consensus 7 ~~~~~~dVlIVGaGpaGl~~A~~La~~G~~-v~vlE~~ 43 (500)
T 2qa1_A 7 HHRSDAAVIVVGAGPAGMMLAGELRLAGVE-VVVLERL 43 (500)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHHTTCC-EEEEESC
T ss_pred CccCCCCEEEECcCHHHHHHHHHHHHCCCC-EEEEeCC
Confidence 344567899999999999999999999995 8898864
No 401
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=81.36 E-value=2.5 Score=40.64 Aligned_cols=34 Identities=12% Similarity=0.221 Sum_probs=26.1
Q ss_pred cCcEEEEcCChhHHHHHHHHHHc-CCCcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLG-GIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~-Gv~~itlvD~d 52 (456)
.-+|.|+|+|.+|..+++.|... ++.-+.++|.+
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~ 37 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRR 37 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESS
T ss_pred CCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCC
Confidence 45899999999999999999876 44444566643
No 402
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=81.33 E-value=0.86 Score=44.34 Aligned_cols=36 Identities=22% Similarity=0.305 Sum_probs=31.6
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.|..++|.|||+|.+|..+|+.|...|. ++..+|..
T Consensus 142 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~ 177 (330)
T 4e5n_A 142 GLDNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEAK 177 (330)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECSS
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCC
Confidence 4789999999999999999999998887 47778754
No 403
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=81.30 E-value=1.5 Score=41.18 Aligned_cols=36 Identities=14% Similarity=0.349 Sum_probs=30.9
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHc-CCCcEEEEeCCc
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLG-GIGSITVIDGSK 53 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~-Gv~~itlvD~d~ 53 (456)
.....|+|||.|..|..+|..|++. |. +++|+|...
T Consensus 37 ~~~~dVvIIGgG~aGl~aA~~la~~~G~-~V~viEk~~ 73 (284)
T 1rp0_A 37 YAETDVVVVGAGSAGLSAAYEISKNPNV-QVAIIEQSV 73 (284)
T ss_dssp HTEEEEEEECCSHHHHHHHHHHHTSTTS-CEEEEESSS
T ss_pred ccccCEEEECccHHHHHHHHHHHHcCCC-eEEEEECCC
Confidence 3556899999999999999999996 87 599998653
No 404
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=81.27 E-value=1.2 Score=45.49 Aligned_cols=33 Identities=24% Similarity=0.362 Sum_probs=29.0
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
-.+|.|||+|.+|+-+|.+|+.+|. .++++|.+
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~ 69 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGI-SVVAVESD 69 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 3579999999999999999999997 68888843
No 405
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=81.23 E-value=1.3 Score=44.35 Aligned_cols=35 Identities=26% Similarity=0.359 Sum_probs=30.2
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
....|+|||+|..|..+|..|++.|. +++|+|...
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~-~V~llEk~~ 60 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGR-RVLVIDHAR 60 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence 35689999999999999999999997 599999754
No 406
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=81.17 E-value=4.1 Score=37.73 Aligned_cols=36 Identities=14% Similarity=0.100 Sum_probs=30.5
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 16 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 16 ~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.|++++|+|.| .||+|.++++.|+..|. +++++|.+
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 41 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIH 41 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecC
Confidence 46778899998 68899999999999997 58888754
No 407
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=81.00 E-value=1.4 Score=40.62 Aligned_cols=47 Identities=17% Similarity=0.138 Sum_probs=29.1
Q ss_pred ccccCHHHHHHHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 6 LRIWGEQGQAALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 6 lrlwG~~~q~~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
-+.|....+....+++|+|.| .||+|.++++.|+..|.. +.++|.+.
T Consensus 9 ~~~~~~~~~~~~m~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~r~~ 56 (251)
T 3orf_A 9 HHSSGLVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWN-TISIDFRE 56 (251)
T ss_dssp -------------CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSC
T ss_pred cccccccccccccCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCc
Confidence 344555555556678899998 578999999999999975 88887543
No 408
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=80.99 E-value=3.5 Score=38.69 Aligned_cols=36 Identities=14% Similarity=0.242 Sum_probs=30.8
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 17 LEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 17 L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
|+++.|+|.| .||+|.++++.|+..|. ++.++|.+.
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~ 43 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSA 43 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCh
Confidence 6778899998 68899999999999998 688887554
No 409
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=80.99 E-value=6.4 Score=37.53 Aligned_cols=33 Identities=15% Similarity=0.090 Sum_probs=27.2
Q ss_pred CcEEEEcCC-hhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 20 ASVCLLNCG-PTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 20 ~~VlIiG~g-glG~eiaknLvl~Gv~~itlvD~d 52 (456)
.+|.|||+| .+|...++.|...|+.-+.++|.+
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~ 37 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPA 37 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSS
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCC
Confidence 589999995 499999999999887666677644
No 410
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=80.96 E-value=2.6 Score=39.02 Aligned_cols=98 Identities=12% Similarity=0.157 Sum_probs=55.3
Q ss_pred cEEEEcC-ChhHHHHHHHHHHc--CCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecC
Q 012768 21 SVCLLNC-GPTGSETLKNLVLG--GIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY 97 (456)
Q Consensus 21 ~VlIiG~-gglG~eiaknLvl~--Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~ 97 (456)
+|+|.|+ |.+|+.+++.|... |. ++++++.+.- +.. .+.. +.+++...+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~-------------------~~~----~~~~--~~~~~~~~D~~ 54 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNPA-------------------KAQ----ALAA--QGITVRQADYG 54 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCTT-------------------TCH----HHHH--TTCEEEECCTT
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcChH-------------------hhh----hhhc--CCCeEEEcCCC
Confidence 5899995 88999999999987 74 6777764311 111 1111 23433222111
Q ss_pred -hhhhhcCCcCCCCCCcEEEEcCCC-----hHHHHHHHHHHHHcCC-eEEEEeeccce
Q 012768 98 -PEALIEMNPPFFSQFTLVVATQLG-----EEKMIKLDRICREANV-MLIFARSYGLT 148 (456)
Q Consensus 98 -~~~~~~~~~~~~~~~dvVi~~~~~-----~~~~~~l~~~~~~~~i-p~i~~~~~G~~ 148 (456)
++.+ ...++++|+||.+... ......+.+.|++.++ .+|..++.+.+
T Consensus 55 d~~~~----~~~~~~~d~vi~~a~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~ 108 (286)
T 2zcu_A 55 DEAAL----TSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHAD 108 (286)
T ss_dssp CHHHH----HHHTTTCSEEEECC--------CHHHHHHHHHHHHTCCEEEEEEETTTT
T ss_pred CHHHH----HHHHhCCCEEEEeCCCCchHHHHHHHHHHHHHHHcCCCEEEEECCCCCC
Confidence 1111 2335678888854321 2234566678887775 57777766543
No 411
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=80.93 E-value=2.2 Score=39.32 Aligned_cols=34 Identities=18% Similarity=0.257 Sum_probs=28.8
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEe
Q 012768 16 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 16 ~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD 50 (456)
.|++++|+|.| .||+|.++++.|+..|.. +.++|
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~ 43 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGAS-VVVTD 43 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCE-EEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEe
Confidence 46778889998 688999999999999985 77776
No 412
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=80.91 E-value=1 Score=41.68 Aligned_cols=35 Identities=26% Similarity=0.347 Sum_probs=29.8
Q ss_pred HHhcCcEEEEcC-C-hhHHHHHHHHHHcCCCcEEEEeC
Q 012768 16 ALEKASVCLLNC-G-PTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 16 ~L~~~~VlIiG~-g-glG~eiaknLvl~Gv~~itlvD~ 51 (456)
.|++++|+|.|+ | |+|.++++.|+..|.. +.++|.
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~-V~~~~r 55 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGAD-VVISDY 55 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCE-EEEecC
Confidence 477889999998 6 8999999999999975 777763
No 413
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=80.89 E-value=1.3 Score=45.58 Aligned_cols=35 Identities=14% Similarity=0.212 Sum_probs=31.1
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
+...+|+|+|+|.+|..+++.|...|. +++++|.+
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~ 306 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEID 306 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 567899999999999999999999997 78888744
No 414
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=80.83 E-value=2 Score=44.94 Aligned_cols=36 Identities=17% Similarity=0.269 Sum_probs=31.7
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCccc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVE 55 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~ 55 (456)
...|+|||.|.+|+.+|..|+..|. +++|+|.+.+.
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~-~V~LlE~~~~~ 67 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGI-KTGLIEMQDFA 67 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCCCC
Confidence 4689999999999999999999997 59999976543
No 415
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=80.79 E-value=2.7 Score=39.28 Aligned_cols=34 Identities=12% Similarity=0.128 Sum_probs=25.9
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEe
Q 012768 16 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 16 ~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD 50 (456)
-++.+.|+|.| .||+|.++++.|+..|.. +.++|
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~ 55 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGIA-VYGCA 55 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEe
Confidence 45667888888 689999999999999975 77766
No 416
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=80.78 E-value=1.5 Score=42.85 Aligned_cols=33 Identities=27% Similarity=0.415 Sum_probs=28.3
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
..+|.|||+|.+|+.+++.|...|. .++++|.+
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~ 40 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANH-SVFGYNRS 40 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTC-CEEEECSC
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 3579999999999999999999994 68888743
No 417
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=80.70 E-value=0.85 Score=43.03 Aligned_cols=43 Identities=14% Similarity=0.288 Sum_probs=34.9
Q ss_pred cCHHHHHHHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 9 WGEQGQAALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 9 wG~~~q~~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
|....+..|++++|+|.| .||+|.++++.|+..|. ++.++|.+
T Consensus 6 ~~~~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~ 49 (291)
T 3rd5_A 6 WTAADLPSFAQRTVVITGANSGLGAVTARELARRGA-TVIMAVRD 49 (291)
T ss_dssp CCGGGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CChhhccCCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECC
Confidence 555555567888999998 68899999999999996 58888754
No 418
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=80.63 E-value=1.4 Score=44.48 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=32.4
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
.|..++|+|+|.|.+|..+|+.|...|. +++++|.+.
T Consensus 208 ~L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p 244 (436)
T 3h9u_A 208 MIAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDP 244 (436)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred cccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCh
Confidence 3668899999999999999999999998 588888654
No 419
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=80.60 E-value=2.8 Score=41.57 Aligned_cols=32 Identities=22% Similarity=0.395 Sum_probs=28.8
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEe
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD 50 (456)
..+|+|+|+|++|..++.-+...|.+++..+|
T Consensus 214 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~ 245 (404)
T 3ip1_A 214 GDNVVILGGGPIGLAAVAILKHAGASKVILSE 245 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEC
Confidence 46799999999999999999999998888886
No 420
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=80.59 E-value=1.1 Score=41.38 Aligned_cols=31 Identities=13% Similarity=0.230 Sum_probs=27.1
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
.+|.|||+|.+|..++++|...| ..++++|.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g-~~v~~~~~ 34 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTP-HELIISGS 34 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSS-CEEEEECS
T ss_pred cEEEEECCCHHHHHHHHHHHhCC-CeEEEECC
Confidence 47999999999999999999998 46777763
No 421
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=80.44 E-value=6 Score=38.31 Aligned_cols=33 Identities=21% Similarity=0.176 Sum_probs=23.3
Q ss_pred cCcEEEEcCChhHHH-HHHHHHHc-CCCcEEEEeC
Q 012768 19 KASVCLLNCGPTGSE-TLKNLVLG-GIGSITVIDG 51 (456)
Q Consensus 19 ~~~VlIiG~gglG~e-iaknLvl~-Gv~~itlvD~ 51 (456)
.-+|.|||+|.+|.. .+..|... |+.=+.++|.
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~ 41 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSS 41 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECS
T ss_pred CceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECC
Confidence 358999999999987 78877654 4433335553
No 422
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=80.44 E-value=2.5 Score=38.93 Aligned_cols=33 Identities=21% Similarity=0.111 Sum_probs=27.0
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHH---cCCCcEEEEe
Q 012768 17 LEKASVCLLN-CGPTGSETLKNLVL---GGIGSITVID 50 (456)
Q Consensus 17 L~~~~VlIiG-~gglG~eiaknLvl---~Gv~~itlvD 50 (456)
|++++|+|.| .||+|.++++.|+. .|. ++.++|
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~ 40 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSA 40 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEE
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEe
Confidence 5567788888 68999999999999 786 577776
No 423
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=80.42 E-value=6.9 Score=38.48 Aligned_cols=91 Identities=13% Similarity=0.161 Sum_probs=50.1
Q ss_pred CcEEEEcC-ChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecCh
Q 012768 20 ASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEYP 98 (456)
Q Consensus 20 ~~VlIiG~-gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~~ 98 (456)
-+|.|+|+ |-+|.|+++-|...+.-.+.+.= +.+....|++-+ +. ........
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~-------------~as~~saG~~~~---------~~-~~~~~~~~--- 56 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRY-------------LASARSAGKSLK---------FK-DQDITIEE--- 56 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEE-------------EECTTTTTCEEE---------ET-TEEEEEEE---
T ss_pred cEEEEECCCChHHHHHHHHHhcCCCCcEEEEE-------------EEccccCCCcce---------ec-CCCceEee---
Confidence 58999995 55899999999887554433321 112223343221 00 11222111
Q ss_pred hhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEEE
Q 012768 99 EALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFA 142 (456)
Q Consensus 99 ~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~ 142 (456)
.+.+.+.+.|+|+.|......+ .+.....+.+..+|+.
T Consensus 57 -----~~~~~~~~~Dvvf~a~~~~~s~-~~a~~~~~~G~~vIDl 94 (366)
T 3pwk_A 57 -----TTETAFEGVDIALFSAGSSTSA-KYAPYAVKAGVVVVDN 94 (366)
T ss_dssp -----CCTTTTTTCSEEEECSCHHHHH-HHHHHHHHTTCEEEEC
T ss_pred -----CCHHHhcCCCEEEECCChHhHH-HHHHHHHHCCCEEEEc
Confidence 1223467899999888654444 3444445667766654
No 424
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=80.37 E-value=11 Score=34.97 Aligned_cols=71 Identities=14% Similarity=0.171 Sum_probs=38.9
Q ss_pred cCcEEEEcCChhHHHHHHHHH-HcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEecC
Q 012768 19 KASVCLLNCGPTGSETLKNLV-LGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIEEY 97 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLv-l~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~~~ 97 (456)
..+||-+|||. |.. +..|+ ..|. +++-+|.+. .-.+.+.+++.+....-.++....+
T Consensus 65 ~~~vLDiGcG~-G~~-~~~l~~~~~~-~v~gvd~s~-------------------~~~~~a~~~~~~~~~~~~~~~~~~d 122 (287)
T 1kpg_A 65 GMTLLDVGCGW-GAT-MMRAVEKYDV-NVVGLTLSK-------------------NQANHVQQLVANSENLRSKRVLLAG 122 (287)
T ss_dssp TCEEEEETCTT-SHH-HHHHHHHHCC-EEEEEESCH-------------------HHHHHHHHHHHTCCCCSCEEEEESC
T ss_pred cCEEEEECCcc-cHH-HHHHHHHcCC-EEEEEECCH-------------------HHHHHHHHHHHhcCCCCCeEEEECC
Confidence 46899999975 332 22333 4466 788887322 2334445555544332234444433
Q ss_pred hhhhhcCCcCCCCCCcEEEEc
Q 012768 98 PEALIEMNPPFFSQFTLVVAT 118 (456)
Q Consensus 98 ~~~~~~~~~~~~~~~dvVi~~ 118 (456)
...+ + ..||+|++.
T Consensus 123 ~~~~----~---~~fD~v~~~ 136 (287)
T 1kpg_A 123 WEQF----D---EPVDRIVSI 136 (287)
T ss_dssp GGGC----C---CCCSEEEEE
T ss_pred hhhC----C---CCeeEEEEe
Confidence 3222 1 589999976
No 425
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=80.35 E-value=1.1 Score=44.00 Aligned_cols=33 Identities=33% Similarity=0.418 Sum_probs=30.1
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
.++|+|||.|..|..+|..|.+.| +++|+|.+.
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g--~V~lie~~~ 40 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY--EVTVIDKEP 40 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS--EEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC--CEEEEECCC
Confidence 589999999999999999999999 999999765
No 426
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=80.34 E-value=1.6 Score=42.13 Aligned_cols=33 Identities=18% Similarity=0.277 Sum_probs=29.3
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
..+|.|||+|-.|+-+|-.++.+|+. ++++|.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~-V~l~D~~ 38 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFR-VKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCC-EEEECSC
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCe-EEEEECC
Confidence 46899999999999999999999985 9999854
No 427
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=80.34 E-value=7.7 Score=37.76 Aligned_cols=92 Identities=11% Similarity=0.139 Sum_probs=53.0
Q ss_pred HhcCcEEEEcCChhHH-HHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEEe
Q 012768 17 LEKASVCLLNCGPTGS-ETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFIE 95 (456)
Q Consensus 17 L~~~~VlIiG~gglG~-eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~ 95 (456)
++.-+|.|||+|..|. ..+..|...|+.=+.++|.+. .|++.+++. .+.+.+ .
T Consensus 24 m~~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~-------------------~~a~~~a~~----~~~~~~--~- 77 (361)
T 3u3x_A 24 MDELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDD-------------------ALAAEFSAV----YADARR--I- 77 (361)
T ss_dssp --CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCH-------------------HHHHHHHHH----SSSCCE--E-
T ss_pred ccCcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCH-------------------HHHHHHHHH----cCCCcc--c-
Confidence 4567999999999885 467777777776566666322 244443332 232221 2
Q ss_pred cChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEE
Q 012768 96 EYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLI 140 (456)
Q Consensus 96 ~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i 140 (456)
.+.+++.+. .+.|+|+.++.+ ..-..+...|.+.|++++
T Consensus 78 ~~~~~ll~~-----~~vD~V~I~tp~-~~H~~~~~~al~aGkhVl 116 (361)
T 3u3x_A 78 ATAEEILED-----ENIGLIVSAAVS-SERAELAIRAMQHGKDVL 116 (361)
T ss_dssp SCHHHHHTC-----TTCCEEEECCCH-HHHHHHHHHHHHTTCEEE
T ss_pred CCHHHHhcC-----CCCCEEEEeCCh-HHHHHHHHHHHHCCCeEE
Confidence 233333221 247888877754 444566667777887644
No 428
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=80.33 E-value=0.93 Score=44.67 Aligned_cols=33 Identities=12% Similarity=0.079 Sum_probs=28.6
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCC------CcEEEEeCC
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGI------GSITVIDGS 52 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv------~~itlvD~d 52 (456)
.+|.|||+|.+|+.++..|+.+|. ..++++|.+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~ 60 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRD 60 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECC
Confidence 479999999999999999999992 468888754
No 429
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=80.33 E-value=2.1 Score=42.34 Aligned_cols=33 Identities=15% Similarity=0.149 Sum_probs=29.7
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
..+|+|||.|.+|+|+|..|...|. ++|+++..
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~-~Vtvv~~~ 178 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGT-PASIGIIL 178 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC-eEEEEEcC
Confidence 6899999999999999999999996 68998743
No 430
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=80.25 E-value=0.7 Score=43.22 Aligned_cols=41 Identities=12% Similarity=0.118 Sum_probs=31.2
Q ss_pred cCHHHHHHHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEe
Q 012768 9 WGEQGQAALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 9 wG~~~q~~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD 50 (456)
+|...+..|++++|+|.| .||+|.++++.|+..|. ++.++|
T Consensus 17 ~g~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~ 58 (266)
T 3grp_A 17 QGPGSMFKLTGRKALVTGATGGIGEAIARCFHAQGA-IVGLHG 58 (266)
T ss_dssp ----CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCcchhccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEe
Confidence 555556678888999998 68899999999999996 477766
No 431
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=80.23 E-value=1.5 Score=44.95 Aligned_cols=33 Identities=18% Similarity=0.245 Sum_probs=29.4
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
-.+|.|||+|..|+-+|.+|+.+|. .++++|.+
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~-~V~l~D~~ 37 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGH-QVLLYDIS 37 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CEEEECSC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC-eEEEEECC
Confidence 4689999999999999999999997 68998844
No 432
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=80.20 E-value=1.6 Score=40.17 Aligned_cols=36 Identities=11% Similarity=0.168 Sum_probs=30.3
Q ss_pred HHHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 15 AALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 15 ~~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
..|+++.|+|.| .||+|.++++.|+..|. ++.++|.
T Consensus 8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 44 (252)
T 3f1l_A 8 DLLNDRIILVTGASDGIGREAAMTYARYGA-TVILLGR 44 (252)
T ss_dssp TTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 357888999998 58899999999999998 5777763
No 433
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=80.19 E-value=1.3 Score=45.24 Aligned_cols=37 Identities=11% Similarity=0.127 Sum_probs=32.6
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
.+..++|.|+|.|.+|..+|+.|...|. +++++|.+.
T Consensus 254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~ 290 (479)
T 1v8b_A 254 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDP 290 (479)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCH
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCCh
Confidence 4788999999999999999999999997 688888553
No 434
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=80.19 E-value=1.5 Score=43.54 Aligned_cols=35 Identities=29% Similarity=0.358 Sum_probs=31.7
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCC-cEEEEeCCc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIG-SITVIDGSK 53 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~-~itlvD~d~ 53 (456)
..+|+|||.|..|..+|..|.+.|.. +++++|.+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 42 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEA 42 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSC
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCC
Confidence 46899999999999999999999985 899999754
No 435
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=80.17 E-value=1.3 Score=44.13 Aligned_cols=35 Identities=26% Similarity=0.323 Sum_probs=31.1
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
++..|+|||.|..|..+|..|+..|. +++|+|...
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~-~V~vlEk~~ 37 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGK 37 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 35789999999999999999999998 699999654
No 436
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=80.16 E-value=1.1 Score=46.03 Aligned_cols=34 Identities=26% Similarity=0.389 Sum_probs=29.2
Q ss_pred CcEEEEcCChhHHHHHHHHHH---cCCCcEEEEeCCcc
Q 012768 20 ASVCLLNCGPTGSETLKNLVL---GGIGSITVIDGSKV 54 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl---~Gv~~itlvD~d~v 54 (456)
.+|+|||.|..|..+|..|++ .|+ +++|+|.+.+
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~-~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRI-DVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGS-EEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCC-EEEEEecCCC
Confidence 579999999999999999999 999 7999997654
No 437
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=80.13 E-value=4.1 Score=41.62 Aligned_cols=110 Identities=12% Similarity=0.111 Sum_probs=60.1
Q ss_pred CcEEEEcC-ChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHH---------hCCCC
Q 012768 20 ASVCLLNC-GPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQE---------LNDAV 89 (456)
Q Consensus 20 ~~VlIiG~-gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~---------lnp~v 89 (456)
.+|+|.|+ |.+|+.+++.|...|. ++++++...- .....+.+.+.++. ..+.+
T Consensus 151 ~~VLVTGatG~iG~~l~~~L~~~g~-~V~~l~R~~~----------------~~~~~~~l~~~l~~~~~~~~~~~~~~~v 213 (508)
T 4f6l_B 151 GNTLLTGATGFLGAYLIEALQGYSH-RIYCFIRADN----------------EEIAWYKLMTNLNDYFSEETVEMMLSNI 213 (508)
T ss_dssp EEEEESCTTSHHHHHHHHHTBTTEE-EEEEEEESSS----------------HHHHHHHHHHHHHHHSCHHHHHHHSTTE
T ss_pred CeEEEECCccchHHHHHHHHHhcCC-EEEEEECCCC----------------hHHHHHHHHHHHHHhcccccchhccCce
Confidence 47999995 8899999999955543 4555542110 00011122222222 23444
Q ss_pred EEEEEecChhhhhcCCcCCCCCCcEEEEcCCC--------------hHHHHHHHHHHHHcCCeEEEEeeccceeeE
Q 012768 90 KAKFIEEYPEALIEMNPPFFSQFTLVVATQLG--------------EEKMIKLDRICREANVMLIFARSYGLTGFV 151 (456)
Q Consensus 90 ~v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~--------------~~~~~~l~~~~~~~~ip~i~~~~~G~~G~v 151 (456)
++ +..+..+. .......++|+||-+... ......+.+.|.+...++|++++.+. |..
T Consensus 214 ~~--v~~Dl~d~--~~l~~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~v-G~~ 284 (508)
T 4f6l_B 214 EV--IVGDFECM--DDVVLPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTY 284 (508)
T ss_dssp EE--EEEBTTBC--SSCCCSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCT-TSE
T ss_pred EE--EecCCccc--ccCCCccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhh-ccC
Confidence 43 33322110 111145689999965321 12234556677777788999988887 643
No 438
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=80.10 E-value=1.6 Score=41.39 Aligned_cols=33 Identities=18% Similarity=0.371 Sum_probs=29.9
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
..+|+|||.|..|..+|..|.+.|. +++|+|..
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~-~v~lie~~ 48 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGF-SVAILDKA 48 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeCC
Confidence 4679999999999999999999997 59999974
No 439
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=80.07 E-value=4 Score=38.13 Aligned_cols=35 Identities=11% Similarity=0.122 Sum_probs=29.6
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 16 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 16 ~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
.|++++|+|.| .||+|.++++.|+..|. ++.++|.
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 64 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGA-QVAVAAR 64 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 46778999998 68999999999999997 4777763
No 440
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=80.01 E-value=0.94 Score=41.15 Aligned_cols=92 Identities=16% Similarity=0.159 Sum_probs=54.2
Q ss_pred cCcEEEEcCChhHHHHHHHHH--HcCCCcEEEEeCCcccccCCCc-cccccccccCcchHHHHHHHHHHhCCCCEEEEEe
Q 012768 19 KASVCLLNCGPTGSETLKNLV--LGGIGSITVIDGSKVEVGDLGN-NFMLDESCVGESKAKSVCAFLQELNDAVKAKFIE 95 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLv--l~Gv~~itlvD~d~v~~~nl~r-~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~~ 95 (456)
..+|+|+|+|.+|..+++.+. ..|..=+-++|.|.-. -.++ . + ..+.|...+
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~--kiG~~~-------i----------------~GvpV~~~~ 138 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSND--LVGKTT-------E----------------DGIPVYGIS 138 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTST--TTTCBC-------T----------------TCCBEEEGG
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchh--ccCcee-------E----------------CCeEEeCHH
Confidence 458999999999999999853 3344456677866420 1121 1 0 023433221
Q ss_pred cChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEEE
Q 012768 96 EYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFA 142 (456)
Q Consensus 96 ~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~ 142 (456)
....+... .+.|+++.|..+. ....+.+.|.+.|+.-|.-
T Consensus 139 -dL~~~v~~-----~~Id~vIIAvPs~-~aq~v~d~lv~~GIk~I~n 178 (212)
T 3keo_A 139 -TINDHLID-----SDIETAILTVPST-EAQEVADILVKAGIKGILS 178 (212)
T ss_dssp -GHHHHC-C-----CSCCEEEECSCGG-GHHHHHHHHHHHTCCEEEE
T ss_pred -HHHHHHHH-----cCCCEEEEecCch-hHHHHHHHHHHcCCCEEEE
Confidence 11111111 1568888887553 4457888899999886644
No 441
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=79.93 E-value=3.1 Score=39.88 Aligned_cols=35 Identities=11% Similarity=0.205 Sum_probs=28.9
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 16 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 16 ~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
.+.+++|+|.| .||+|.++++.|+..|.. +.++|.
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~-Vv~~~r 40 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCK-VAIADI 40 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHCCCE-EEEEEC
Confidence 35677899998 588999999999999974 777763
No 442
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=79.91 E-value=1.6 Score=41.46 Aligned_cols=33 Identities=15% Similarity=0.254 Sum_probs=30.1
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
..+|+|||.|..|..+|..|.+.|. +++|+|..
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~-~v~lie~~ 40 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQL-STLILEKG 40 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCC-cEEEEeCC
Confidence 4579999999999999999999997 69999976
No 443
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=79.87 E-value=1.1 Score=45.23 Aligned_cols=34 Identities=26% Similarity=0.387 Sum_probs=30.6
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
+..|+|||+|..|+.+|..|++.|+ +++|+|...
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~-~V~vlE~~~ 39 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGL-KILLVDSKP 39 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSC-CEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCC
Confidence 4689999999999999999999998 599999754
No 444
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=79.85 E-value=1.2 Score=44.08 Aligned_cols=36 Identities=17% Similarity=0.164 Sum_probs=31.2
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 15 AALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 15 ~~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
..|..++|.|||+|.+|..+|+.|...|. ++..+|.
T Consensus 172 ~~l~gktvGIIGlG~IG~~vA~~l~~fG~-~V~~~d~ 207 (365)
T 4hy3_A 172 RLIAGSEIGIVGFGDLGKALRRVLSGFRA-RIRVFDP 207 (365)
T ss_dssp CCSSSSEEEEECCSHHHHHHHHHHTTSCC-EEEEECS
T ss_pred cccCCCEEEEecCCcccHHHHHhhhhCCC-EEEEECC
Confidence 35889999999999999999999988887 5777774
No 445
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=79.82 E-value=1.4 Score=40.83 Aligned_cols=36 Identities=19% Similarity=0.190 Sum_probs=30.0
Q ss_pred HHHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 15 AALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 15 ~~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
..|++++|+|.| .||+|.++++.|+..|.. +.++|.
T Consensus 4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r 40 (259)
T 4e6p_A 4 KRLEGKSALITGSARGIGRAFAEAYVREGAT-VAIADI 40 (259)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeC
Confidence 357788899998 689999999999999974 777763
No 446
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=79.80 E-value=0.61 Score=43.40 Aligned_cols=36 Identities=17% Similarity=0.171 Sum_probs=30.1
Q ss_pred HHHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 15 AALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 15 ~~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
..|++++|+|.| .||+|.++++.|+..|. ++.++|.
T Consensus 6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 42 (262)
T 3pk0_A 6 FDLQGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGR 42 (262)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 356778888888 68999999999999998 6777763
No 447
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=79.76 E-value=1.5 Score=44.16 Aligned_cols=36 Identities=11% Similarity=0.196 Sum_probs=31.2
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCC-cEEEEeCCc
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIG-SITVIDGSK 53 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~-~itlvD~d~ 53 (456)
+..+|+|||.|..|..+|..|.+.|.+ +++++|...
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~ 38 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATE 38 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSS
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 357899999999999999999999654 799998754
No 448
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=79.76 E-value=1.4 Score=40.81 Aligned_cols=36 Identities=17% Similarity=0.293 Sum_probs=30.5
Q ss_pred HHHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 15 AALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 15 ~~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
..|++++|+|.| .||+|.++++.|+..|. ++.++|.
T Consensus 4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r 40 (255)
T 4eso_A 4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGR 40 (255)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 357788999998 68899999999999998 5777763
No 449
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=79.75 E-value=3.3 Score=39.83 Aligned_cols=33 Identities=6% Similarity=0.002 Sum_probs=24.8
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHc-CCCcEEEEe
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLG-GIGSITVID 50 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~-Gv~~itlvD 50 (456)
+..+|.|||+|.+|...++.|... |+.-+.++|
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d 37 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIAS 37 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBC
T ss_pred CeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEe
Confidence 346899999999999999999885 433233455
No 450
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=79.73 E-value=2.5 Score=38.50 Aligned_cols=34 Identities=21% Similarity=0.271 Sum_probs=28.7
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEe
Q 012768 16 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 16 ~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD 50 (456)
.|++++|+|.| .|++|.++++.|+..|. +++++|
T Consensus 8 ~~~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~ 42 (255)
T 1fmc_A 8 RLDGKCAIITGAGAGIGKEIAITFATAGA-SVVVSD 42 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEc
Confidence 36678899998 58999999999999996 577776
No 451
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=79.71 E-value=1.4 Score=45.34 Aligned_cols=35 Identities=31% Similarity=0.527 Sum_probs=30.7
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
-....|+|||+|..|..+|..|.+.|+. ++|+|..
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~-v~vlE~~ 44 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVD-VMVLEQL 44 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCC-EEEEESC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCC-EEEEECC
Confidence 3567899999999999999999999995 8899864
No 452
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=80.89 E-value=0.37 Score=43.37 Aligned_cols=34 Identities=18% Similarity=0.295 Sum_probs=28.9
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
+...+|.|||+|.+|+.++++|...|. .++++|.
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~-~V~~~~r 50 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGY-SVVFGSR 50 (201)
Confidence 566789999999999999999999986 4666653
No 453
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=79.67 E-value=1.6 Score=44.48 Aligned_cols=33 Identities=21% Similarity=0.317 Sum_probs=29.6
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
.+|.|||+|..|+-+|.+|+.+|. .++++|.+.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~-~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGI-ETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEEECcH
Confidence 589999999999999999999998 699998543
No 454
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=79.65 E-value=1.3 Score=45.85 Aligned_cols=34 Identities=21% Similarity=0.320 Sum_probs=30.4
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
+..|+|||+|..|..+|..|.+.|+ +++|+|.+.
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~-~v~viEr~~ 38 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGV-RVLVVERRP 38 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence 4679999999999999999999999 499999764
No 455
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=79.64 E-value=2.3 Score=39.31 Aligned_cols=31 Identities=16% Similarity=0.175 Sum_probs=24.7
Q ss_pred HHHhcCcEEEEc-CChhHHHHHHHHHHcCCCc
Q 012768 15 AALEKASVCLLN-CGPTGSETLKNLVLGGIGS 45 (456)
Q Consensus 15 ~~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~ 45 (456)
..+.+++|+|.| .||+|.++++.|+..|..-
T Consensus 22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v 53 (267)
T 4iiu_A 22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNI 53 (267)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEE
Confidence 457778899998 6889999999999999863
No 456
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=79.62 E-value=1.5 Score=43.47 Aligned_cols=45 Identities=18% Similarity=0.384 Sum_probs=30.8
Q ss_pred ccCHHHHHHHh--cCcEEEEcCChhHHHHHHHHHHc--CCCcEEEEeCCcc
Q 012768 8 IWGEQGQAALE--KASVCLLNCGPTGSETLKNLVLG--GIGSITVIDGSKV 54 (456)
Q Consensus 8 lwG~~~q~~L~--~~~VlIiG~gglG~eiaknLvl~--Gv~~itlvD~d~v 54 (456)
.|-..++ .+. ...|+|||+|..|+.+|..|++. |. +++|+|....
T Consensus 24 ~~~~~~~-~m~~~~~dVvIIGaGi~Gls~A~~La~~~pG~-~V~vlE~~~~ 72 (405)
T 3c4n_A 24 VWAHVGQ-HFTEEAFDIVVIGAGRMGAACAFYLRQLAPGR-SLLLVEEGGL 72 (405)
T ss_dssp -----------CCEEEEEEECCSHHHHHHHHHHHHHCTTS-CEEEECSSCS
T ss_pred cccccCC-CCCcCcCCEEEECCcHHHHHHHHHHHhcCCCC-eEEEEeCCCC
Confidence 4555444 243 25799999999999999999999 98 5999997644
No 457
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=79.59 E-value=1.7 Score=44.44 Aligned_cols=43 Identities=7% Similarity=-0.058 Sum_probs=34.7
Q ss_pred HHHHHHhcCcEEEEcCChhHHHHHHHHHHc-CCCcEEEEeCCcc
Q 012768 12 QGQAALEKASVCLLNCGPTGSETLKNLVLG-GIGSITVIDGSKV 54 (456)
Q Consensus 12 ~~q~~L~~~~VlIiG~gglG~eiaknLvl~-Gv~~itlvD~d~v 54 (456)
...++..-.+|.|||+|.+|.-+|.+|+.. |...++++|.+.-
T Consensus 11 ~~~~~~~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 11 LLKERGPIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp HHHHHCSCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred HHhhcCCCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 334444556899999999999999999999 8757999996643
No 458
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=79.53 E-value=5.6 Score=38.36 Aligned_cols=31 Identities=16% Similarity=0.178 Sum_probs=23.6
Q ss_pred CcEEEEcCChhHHHHHHHHHHc-CCCcEEEEe
Q 012768 20 ASVCLLNCGPTGSETLKNLVLG-GIGSITVID 50 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~-Gv~~itlvD 50 (456)
-+|.|||+|.+|...++.|... |+.-+.++|
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d 34 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISD 34 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEEC
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEEC
Confidence 4799999999999999999874 443333555
No 459
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=79.52 E-value=3.6 Score=38.97 Aligned_cols=33 Identities=12% Similarity=0.230 Sum_probs=28.2
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEe
Q 012768 17 LEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 17 L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD 50 (456)
+.+++|+|.| .||+|.++++.|+..|. ++.++|
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~ 62 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA-RLVLSD 62 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEE
Confidence 6678899998 57899999999999996 477765
No 460
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=79.38 E-value=3.7 Score=37.96 Aligned_cols=34 Identities=12% Similarity=0.143 Sum_probs=28.9
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEe
Q 012768 16 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 16 ~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD 50 (456)
.|++++|+|.| .||+|.++++.|+..|.. +.++|
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~ 42 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGAD-LVLAA 42 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTCE-EEEEE
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcCE-EEEEe
Confidence 46788899998 578999999999999975 77776
No 461
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=79.33 E-value=11 Score=36.51 Aligned_cols=32 Identities=9% Similarity=0.224 Sum_probs=24.5
Q ss_pred cCcEEEEcCChhHHHHHHHHHHc-CCCcEEEEe
Q 012768 19 KASVCLLNCGPTGSETLKNLVLG-GIGSITVID 50 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~-Gv~~itlvD 50 (456)
.-+|.|||+|.+|...++.|... ++.-+.++|
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d 38 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAPNATISGVAS 38 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEEC
T ss_pred ceEEEEECchHHHHHHHHHHhhCCCcEEEEEEc
Confidence 35899999999999999998874 443344555
No 462
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=79.18 E-value=1.6 Score=44.12 Aligned_cols=35 Identities=14% Similarity=0.257 Sum_probs=31.2
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
|..++|+|+|.|.+|..+|+.|...|. +++++|.+
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~d 279 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVD 279 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 678999999999999999999999998 68888743
No 463
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=79.18 E-value=1.6 Score=45.69 Aligned_cols=34 Identities=24% Similarity=0.393 Sum_probs=29.4
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
+..|+|||+|..|..+|..|++.|+ +++|+|...
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~-~V~VlEr~~ 82 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGV-GALVLEKLV 82 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTC-CEEEEBSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence 4579999999999999999999999 599999653
No 464
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=79.12 E-value=1.6 Score=43.67 Aligned_cols=35 Identities=26% Similarity=0.128 Sum_probs=30.1
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCC-CcEEEEeCCc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGI-GSITVIDGSK 53 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv-~~itlvD~d~ 53 (456)
.++|+|||.|..|..+|+.|.+.|- .+|||||...
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCC
Confidence 3689999999999999999998876 3799998653
No 465
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=79.11 E-value=2.6 Score=41.11 Aligned_cols=36 Identities=22% Similarity=0.208 Sum_probs=26.3
Q ss_pred hcCcEEEEcCChhHHH-HHHHHHHc-CCCcEEEEeCCc
Q 012768 18 EKASVCLLNCGPTGSE-TLKNLVLG-GIGSITVIDGSK 53 (456)
Q Consensus 18 ~~~~VlIiG~gglG~e-iaknLvl~-Gv~~itlvD~d~ 53 (456)
+.-+|.|||+|.+|.. .+++|... |+.-+.++|.+.
T Consensus 4 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~ 41 (359)
T 3m2t_A 4 SLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDL 41 (359)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSH
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCH
Confidence 3468999999999996 88998765 544344666543
No 466
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=78.93 E-value=1.5 Score=42.37 Aligned_cols=33 Identities=21% Similarity=0.312 Sum_probs=29.9
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
..+|+|||.|..|..+|..|.+.|. +++|+|..
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~-~v~lie~~ 46 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNI-SCRIIESM 46 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC-CEEEEecC
Confidence 4689999999999999999999997 69999864
No 467
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=78.86 E-value=1.7 Score=44.21 Aligned_cols=33 Identities=27% Similarity=0.412 Sum_probs=29.9
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
..+|+|||.|..|..+|..|.+.|. +++|+|..
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~-~V~v~e~~ 154 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGY-EVHVYDRY 154 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecc
Confidence 4679999999999999999999997 59999864
No 468
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=78.85 E-value=1.7 Score=43.96 Aligned_cols=34 Identities=18% Similarity=0.291 Sum_probs=30.9
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
..+|+|||.|..|..+|..|.+.|. +++|+|.+.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~-~V~lie~~~ 37 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGA-QVTLIERGT 37 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCC
Confidence 4689999999999999999999997 799999763
No 469
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=78.82 E-value=1.6 Score=42.03 Aligned_cols=34 Identities=18% Similarity=0.047 Sum_probs=30.2
Q ss_pred cEEEEcCChhHHHHHHHHHHcC-----CCcEEEEeCCcc
Q 012768 21 SVCLLNCGPTGSETLKNLVLGG-----IGSITVIDGSKV 54 (456)
Q Consensus 21 ~VlIiG~gglG~eiaknLvl~G-----v~~itlvD~d~v 54 (456)
.|+|||.|.+|+.+|..|++.| -.+++|+|...+
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 6999999999999999999998 257999998764
No 470
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=78.82 E-value=1.6 Score=43.25 Aligned_cols=33 Identities=18% Similarity=0.130 Sum_probs=29.4
Q ss_pred CcEEEEcCChhHHHHHHHHHH---cCCCcEEEEeCCc
Q 012768 20 ASVCLLNCGPTGSETLKNLVL---GGIGSITVIDGSK 53 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl---~Gv~~itlvD~d~ 53 (456)
.+|+|||.|..|.++|..|.+ .|. ++||+|...
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~-~V~vie~~~ 37 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKA-DVKVINKSR 37 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGS-EEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCC-eEEEEeCCC
Confidence 479999999999999999999 776 699999765
No 471
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=78.79 E-value=1.8 Score=43.41 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=31.6
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCC-cEEEEeCCc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIG-SITVIDGSK 53 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~-~itlvD~d~ 53 (456)
..+|+|||.|..|..+|..|.+.|.. +++++|.+.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDAT 39 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCC
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCC
Confidence 46899999999999999999999985 899999754
No 472
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=78.79 E-value=1.8 Score=40.44 Aligned_cols=33 Identities=15% Similarity=0.179 Sum_probs=27.2
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEe
Q 012768 17 LEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 17 L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD 50 (456)
|+++.++|-| .+|+|.++|+.|+..|. ++.+.|
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~ 40 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGA-RVILND 40 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEE
Confidence 5677777777 78999999999999998 477765
No 473
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=78.78 E-value=1.6 Score=43.48 Aligned_cols=36 Identities=22% Similarity=0.360 Sum_probs=32.0
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCC-cEEEEeCCcc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIG-SITVIDGSKV 54 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~-~itlvD~d~v 54 (456)
..+|+|||.|..|..+|..|.+.|.. +++++|...-
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~ 45 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPE 45 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSS
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCC
Confidence 46899999999999999999999985 7999997653
No 474
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=78.72 E-value=2.9 Score=38.77 Aligned_cols=34 Identities=18% Similarity=0.186 Sum_probs=28.2
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEe
Q 012768 16 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 16 ~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD 50 (456)
.+++++|+|.| .||+|.++++.|+..|.. +.+++
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~ 60 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGLK-VWINY 60 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEe
Confidence 36677899998 589999999999999984 66665
No 475
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=78.70 E-value=1.6 Score=40.79 Aligned_cols=35 Identities=14% Similarity=0.267 Sum_probs=29.8
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 16 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 16 ~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
.|.+++|+|.| .||+|.++++.|+..|. ++.++|.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 43 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGR 43 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 57788999998 68999999999999997 4777763
No 476
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=78.69 E-value=1.3 Score=42.59 Aligned_cols=32 Identities=31% Similarity=0.345 Sum_probs=29.0
Q ss_pred CcEEEEcCChhHHHHHHHHHH---cCCCcEEEEeCC
Q 012768 20 ASVCLLNCGPTGSETLKNLVL---GGIGSITVIDGS 52 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl---~Gv~~itlvD~d 52 (456)
.+|+|||.|..|..+|..|.+ .|+ +++|+|..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~-~V~v~Ek~ 36 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPL-YLAVWDKA 36 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCE-EEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCc-eEEEEECC
Confidence 379999999999999999999 898 79999965
No 477
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=78.68 E-value=1.7 Score=43.67 Aligned_cols=36 Identities=17% Similarity=0.145 Sum_probs=31.1
Q ss_pred HHhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 16 ALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 16 ~L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
.|..++|+|+|+|.+|..+|+.|...|. +++++|.+
T Consensus 217 ~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~d 252 (435)
T 3gvp_A 217 MFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEID 252 (435)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred eecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 3577899999999999999999999998 48887743
No 478
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=78.58 E-value=4.6 Score=39.28 Aligned_cols=37 Identities=14% Similarity=0.172 Sum_probs=31.3
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 16 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 16 ~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
+|+++.|+|.| .||+|.++++.|+..|. ++.++|.+.
T Consensus 42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~ 79 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTA 79 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCC
T ss_pred CCCCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECCh
Confidence 56788899998 58999999999999997 588887543
No 479
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=78.57 E-value=1.9 Score=39.94 Aligned_cols=34 Identities=24% Similarity=0.329 Sum_probs=28.9
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEe
Q 012768 16 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 16 ~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD 50 (456)
.|++++|+|.| .|++|.++++.|+..|. +++++|
T Consensus 13 ~l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~ 47 (278)
T 2bgk_A 13 RLQDKVAIITGGAGGIGETTAKLFVRYGA-KVVIAD 47 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEc
Confidence 46778899998 68899999999999996 577765
No 480
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=78.43 E-value=2.2 Score=43.73 Aligned_cols=35 Identities=14% Similarity=0.310 Sum_probs=31.4
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcc
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKV 54 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v 54 (456)
+..|+|||.|..|..+|..|++.|+ +++|+|....
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~-~V~liE~~~~ 41 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGH-RVLLLEREAF 41 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTC-CEEEECSSCS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCC-CEEEEccCCC
Confidence 4689999999999999999999998 6999997753
No 481
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=78.43 E-value=1.6 Score=44.92 Aligned_cols=40 Identities=18% Similarity=0.299 Sum_probs=35.5
Q ss_pred HHHhcCcEEEEcCChhHHHHHHHHHH----cCC------CcEEEEeCCcc
Q 012768 15 AALEKASVCLLNCGPTGSETLKNLVL----GGI------GSITVIDGSKV 54 (456)
Q Consensus 15 ~~L~~~~VlIiG~gglG~eiaknLvl----~Gv------~~itlvD~d~v 54 (456)
++|++.+|++.|+|+.|+-||+.|+. .|+ ++|.++|..-+
T Consensus 278 k~l~d~riv~~GAGaAg~gia~ll~~~~~~~G~~~eeA~~~i~~~D~~Gl 327 (555)
T 1gq2_A 278 NRLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGL 327 (555)
T ss_dssp SCGGGCCEEEECCSHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEE
T ss_pred CChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChHHHhCcEEEEECCCe
Confidence 46889999999999999999999998 896 79999997544
No 482
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=78.37 E-value=2.9 Score=38.30 Aligned_cols=34 Identities=12% Similarity=0.183 Sum_probs=28.7
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 17 LEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 17 L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
+++++|+|.| .|++|.++++.|+..|. +++++|.
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r 46 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYR 46 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEES
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeC
Confidence 5667899998 68899999999999996 6777764
No 483
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=78.34 E-value=1.9 Score=40.31 Aligned_cols=36 Identities=8% Similarity=0.064 Sum_probs=30.4
Q ss_pred HHHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEeC
Q 012768 15 AALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVIDG 51 (456)
Q Consensus 15 ~~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD~ 51 (456)
..|++++|+|.| .||+|.++++.|+..|. ++.++|.
T Consensus 23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r 59 (277)
T 4fc7_A 23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASR 59 (277)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEES
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 357888999998 57899999999999998 6777763
No 484
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=78.31 E-value=5.2 Score=38.98 Aligned_cols=34 Identities=18% Similarity=0.175 Sum_probs=25.6
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHc-CCCcEEEEeC
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLG-GIGSITVIDG 51 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~-Gv~~itlvD~ 51 (456)
+.-+|.|||+|.+|...+++|... |+.-+.++|.
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~ 38 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDI 38 (359)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECS
T ss_pred CcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcC
Confidence 456899999999999999998876 4433345554
No 485
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=78.31 E-value=2.5 Score=39.39 Aligned_cols=33 Identities=15% Similarity=0.225 Sum_probs=27.1
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEe
Q 012768 17 LEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 17 L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD 50 (456)
|.+++|+|.| .||+|.++++.|+..|.. +.++|
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~ 35 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAK-ILLGA 35 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCE-EEEEE
Confidence 3456788888 588999999999999975 77776
No 486
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=78.20 E-value=3.8 Score=40.69 Aligned_cols=31 Identities=16% Similarity=0.168 Sum_probs=25.8
Q ss_pred CcEEEEcCChhHHHHHHHHHHcCCC-------cEEEEe
Q 012768 20 ASVCLLNCGPTGSETLKNLVLGGIG-------SITVID 50 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl~Gv~-------~itlvD 50 (456)
.||.|+|+|+-|+.+|+.|+..|-+ .++++-
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~ 72 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWV 72 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEEC
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEE
Confidence 3899999999999999999998742 367764
No 487
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=78.17 E-value=3.3 Score=39.46 Aligned_cols=34 Identities=18% Similarity=0.301 Sum_probs=22.7
Q ss_pred hcCcEEEEcCChhHHHHHHHHHH-cCCCcEEEEeCCc
Q 012768 18 EKASVCLLNCGPTGSETLKNLVL-GGIGSITVIDGSK 53 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl-~Gv~~itlvD~d~ 53 (456)
...+|||||.|+-| +++.+.+ .++.++++||-|.
T Consensus 83 ~pk~VLIiGgGdG~--~~revlk~~~v~~v~~VEID~ 117 (294)
T 3o4f_A 83 HAKHVLIIGGGDGA--MLREVTRHKNVESITMVEIDA 117 (294)
T ss_dssp CCCEEEEESCTTSH--HHHHHHTCTTCCEEEEEESCH
T ss_pred CCCeEEEECCCchH--HHHHHHHcCCcceEEEEcCCH
Confidence 35689999975433 2334443 5899999998443
No 488
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=78.17 E-value=1.7 Score=46.52 Aligned_cols=33 Identities=15% Similarity=0.156 Sum_probs=30.3
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
...|+|||.|..|..+|..|+..|. +++|+|.+
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~-~V~vlEk~ 296 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGA-VVTLYCAD 296 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCC-cEEEEeCC
Confidence 4689999999999999999999998 69999974
No 489
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=78.13 E-value=2.9 Score=40.66 Aligned_cols=29 Identities=17% Similarity=0.202 Sum_probs=22.8
Q ss_pred CcEEEEc-CChhHHHHHHHHHHcCCCcEEE
Q 012768 20 ASVCLLN-CGPTGSETLKNLVLGGIGSITV 48 (456)
Q Consensus 20 ~~VlIiG-~gglG~eiaknLvl~Gv~~itl 48 (456)
.+|.|+| .|-+|.++++.|...+...+.+
T Consensus 4 ~kV~I~GAtG~iG~~llr~L~~~~~p~~el 33 (336)
T 2r00_A 4 FNVAIFGATGAVGETMLEVLQEREFPVDEL 33 (336)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEECCCCHHHHHHHHHHhcCCCCCEEE
Confidence 5799999 7889999999998875444433
No 490
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=78.10 E-value=1.8 Score=43.69 Aligned_cols=32 Identities=19% Similarity=0.239 Sum_probs=28.6
Q ss_pred cEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCc
Q 012768 21 SVCLLNCGPTGSETLKNLVLGGIGSITVIDGSK 53 (456)
Q Consensus 21 ~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~ 53 (456)
+|+|||+|.+|..+|..|+..|. +++++|.+.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~-~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-EEEEEECCH
Confidence 69999999999999999999997 589998643
No 491
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=78.08 E-value=2.7 Score=41.17 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=30.1
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCC
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGS 52 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d 52 (456)
...+|+|||.|.+|.|+|..|...|. ++|+++..
T Consensus 142 ~~~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~~ 175 (367)
T 1xhc_A 142 NSGEAIIIGGGFIGLELAGNLAEAGY-HVKLIHRG 175 (367)
T ss_dssp HHSEEEEEECSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred cCCcEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 34899999999999999999999997 69998753
No 492
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=78.08 E-value=1.6 Score=40.17 Aligned_cols=34 Identities=12% Similarity=0.174 Sum_probs=28.7
Q ss_pred HHhcCcEEEEc-CChhHHHHHHHHHHcCCCcEEEEe
Q 012768 16 ALEKASVCLLN-CGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 16 ~L~~~~VlIiG-~gglG~eiaknLvl~Gv~~itlvD 50 (456)
.|.+++|+|.| .||+|.++++.|+..|. ++.++|
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~ 37 (256)
T 2d1y_A 3 LFAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCD 37 (256)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEe
Confidence 36678899998 68899999999999996 577776
No 493
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=78.06 E-value=4.4 Score=39.14 Aligned_cols=95 Identities=18% Similarity=0.131 Sum_probs=52.3
Q ss_pred HHHHhcCcEEEEcCC-hhHHHHHHHHHHc--CCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCE
Q 012768 14 QAALEKASVCLLNCG-PTGSETLKNLVLG--GIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVK 90 (456)
Q Consensus 14 q~~L~~~~VlIiG~g-glG~eiaknLvl~--Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~ 90 (456)
++.-..-+|.|||+| ..|...+..|... ++.-+.++|.+ ..|++.+++.+. ...
T Consensus 13 ~~~~~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~-------------------~~~~~~~a~~~~----~~~ 69 (340)
T 1zh8_A 13 MKPLRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRT-------------------RSHAEEFAKMVG----NPA 69 (340)
T ss_dssp ---CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSS-------------------HHHHHHHHHHHS----SCE
T ss_pred cCCCCceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCC-------------------HHHHHHHHHHhC----CCc
Confidence 344455689999999 7899999998875 33333455522 235544444331 112
Q ss_pred EEEEecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEE
Q 012768 91 AKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLI 140 (456)
Q Consensus 91 v~~~~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i 140 (456)
... +.+++.+. .+.|+|+.++.+ .....+...|.+.|++++
T Consensus 70 --~~~-~~~~ll~~-----~~vD~V~i~tp~-~~H~~~~~~al~aGkhVl 110 (340)
T 1zh8_A 70 --VFD-SYEELLES-----GLVDAVDLTLPV-ELNLPFIEKALRKGVHVI 110 (340)
T ss_dssp --EES-CHHHHHHS-----SCCSEEEECCCG-GGHHHHHHHHHHTTCEEE
T ss_pred --ccC-CHHHHhcC-----CCCCEEEEeCCc-hHHHHHHHHHHHCCCcEE
Confidence 222 23333221 257888877754 334455566777777643
No 494
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=77.95 E-value=2.5 Score=43.31 Aligned_cols=31 Identities=16% Similarity=0.208 Sum_probs=27.8
Q ss_pred HHHHHHHhc-CcEEEEcCChhHHHHHHHHHHc
Q 012768 11 EQGQAALEK-ASVCLLNCGPTGSETLKNLVLG 41 (456)
Q Consensus 11 ~~~q~~L~~-~~VlIiG~gglG~eiaknLvl~ 41 (456)
....+.|+. .+|.|||+|..|..+|+||..+
T Consensus 45 ~~~~~~L~GiKkIgIIGlGsMG~AmA~nLr~s 76 (525)
T 3fr7_A 45 PLLPEAFKGIKQIGVIGWGSQGPAQAQNLRDS 76 (525)
T ss_dssp GGHHHHTTTCSEEEEECCTTHHHHHHHHHHHH
T ss_pred ccChHHhcCCCEEEEEeEhHHHHHHHHHHHhc
Confidence 334678999 9999999999999999999999
No 495
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=77.85 E-value=2.4 Score=40.84 Aligned_cols=32 Identities=16% Similarity=0.230 Sum_probs=27.5
Q ss_pred hcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEe
Q 012768 18 EKASVCLLNCGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 18 ~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD 50 (456)
...+|+|.|+|++|..++.-+...|. +++.+|
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~ 197 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGL-RVAAVD 197 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEe
Confidence 35679999999999999999999998 677776
No 496
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=77.83 E-value=3.8 Score=41.85 Aligned_cols=52 Identities=13% Similarity=0.203 Sum_probs=39.9
Q ss_pred HhcCcEEEEcCChhHHHHHHHHHHcCCCcEEEEeCCcccccCCCccccccccccCcchHHH
Q 012768 17 LEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKS 77 (456)
Q Consensus 17 L~~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~ 77 (456)
|+.++|+|-|.|-+|..+|+.|...|.+-+++.|.+ ..++.++.+...+...
T Consensus 242 l~g~tVaVQG~GNVG~~aa~~L~e~GakVVavsDs~---------G~iyd~~Gid~~~l~~ 293 (501)
T 3mw9_A 242 FGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESD---------GSIWNPDGIDPKELED 293 (501)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSS---------CEEECTTCCCHHHHHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCC---------ceEECCCCCCHHHHHH
Confidence 568899999999999999999999999888888743 2455565555444433
No 497
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=77.81 E-value=2.1 Score=41.31 Aligned_cols=31 Identities=16% Similarity=0.281 Sum_probs=27.3
Q ss_pred cCcEEEEcCChhHHHHHHHHHHcCCCcEEEEe
Q 012768 19 KASVCLLNCGPTGSETLKNLVLGGIGSITVID 50 (456)
Q Consensus 19 ~~~VlIiG~gglG~eiaknLvl~Gv~~itlvD 50 (456)
..+|+|+|+|++|..++..+...|. +++.+|
T Consensus 165 g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~ 195 (339)
T 1rjw_A 165 GEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVD 195 (339)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTC-EEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-EEEEEe
Confidence 4689999999999999999999998 777776
No 498
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=77.79 E-value=4 Score=38.41 Aligned_cols=101 Identities=11% Similarity=0.143 Sum_probs=56.6
Q ss_pred HhcCcEEEEc-CChhHHHHHHHHHHc-CCCcEEEEeCCcccccCCCccccccccccCcchHHHHHHHHHHhCCCCEEEEE
Q 012768 17 LEKASVCLLN-CGPTGSETLKNLVLG-GIGSITVIDGSKVEVGDLGNNFMLDESCVGESKAKSVCAFLQELNDAVKAKFI 94 (456)
Q Consensus 17 L~~~~VlIiG-~gglG~eiaknLvl~-Gv~~itlvD~d~v~~~nl~r~f~~~~~dvG~~Ka~~~~~~l~~lnp~v~v~~~ 94 (456)
++.-||.|+| +|.+|.++++.+... ++.=+-++|...-. . ...|+|. +..+.+.+.+
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~---~------~G~d~ge---------l~g~~~gv~v--- 63 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSP---Q------LGQDAGA---------FLGKQTGVAL--- 63 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCT---T------TTSBTTT---------TTTCCCSCBC---
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcc---c------ccccHHH---------HhCCCCCcee---
Confidence 3446899999 799999999998854 43333334532110 0 0112221 0012223321
Q ss_pred ecChhhhhcCCcCCCCCCcEEEEcCCChHHHHHHHHHHHHcCCeEEEEeeccc
Q 012768 95 EEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGL 147 (456)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~dvVi~~~~~~~~~~~l~~~~~~~~ip~i~~~~~G~ 147 (456)
..+.+. .+.++|+||.++.+ .........|.++++|+|. ++.|+
T Consensus 64 ~~dl~~-------ll~~~DVVIDfT~p-~a~~~~~~~al~~G~~vVi-gTTG~ 107 (272)
T 4f3y_A 64 TDDIER-------VCAEADYLIDFTLP-EGTLVHLDAALRHDVKLVI-GTTGF 107 (272)
T ss_dssp BCCHHH-------HHHHCSEEEECSCH-HHHHHHHHHHHHHTCEEEE-CCCCC
T ss_pred cCCHHH-------HhcCCCEEEEcCCH-HHHHHHHHHHHHcCCCEEE-ECCCC
Confidence 112222 23368999988754 4555677789999999775 45553
No 499
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=77.78 E-value=2 Score=43.56 Aligned_cols=33 Identities=18% Similarity=0.457 Sum_probs=29.9
Q ss_pred CcEEEEcCChhHHHHHHHHHH---cCCCc--EEEEeCC
Q 012768 20 ASVCLLNCGPTGSETLKNLVL---GGIGS--ITVIDGS 52 (456)
Q Consensus 20 ~~VlIiG~gglG~eiaknLvl---~Gv~~--itlvD~d 52 (456)
.+|+|||+|..|..+|+.|.+ .|... ++++|..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~ 40 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQ 40 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcC
Confidence 589999999999999999999 99863 9999965
No 500
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=77.75 E-value=1.6 Score=41.51 Aligned_cols=30 Identities=20% Similarity=0.277 Sum_probs=26.3
Q ss_pred cEEEEcCChhHHHHHHHHHHc-----CCCcEEEEe
Q 012768 21 SVCLLNCGPTGSETLKNLVLG-----GIGSITVID 50 (456)
Q Consensus 21 ~VlIiG~gglG~eiaknLvl~-----Gv~~itlvD 50 (456)
+|+|+|+|.+|+.++..|..+ |-..++++|
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~ 44 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIA 44 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEE
Confidence 799999999999999999998 733688876
Done!