Citrus Sinensis ID: 012769

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450------
MGSCFSAESRSPIPGSPSSPGLGIRKRKSSRKKLGSRNPSFDYRREEPLHRIPGRLFLNGSSEIASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLFLDSNSNTNGISTSSTFKMKEQLTSAQPACPGQELSEPLVMKKYTLKKVKMMLRSWTIQIQIGPLLKECLVLILS
ccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccEEEEEEccccccccccEEEEEcccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccccccccccccccccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEccEEEEEEcccccEEEEEccccccEEEEccccccccccHHHHHHHHHcccEEEEEcccccccEEEcccccccccEEEcccccccccccccEEccEEEEEEccccccEEEEEcccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEcccccccccccccccHHHccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHcc
cccEEEcccccccccccccccccEEcccccccccccHHHHcccccccccEEccccEEcccccEEEEEEccccccccccHHHEEEHcccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEccccEEEEEcccccEEEEEcccccEEEEEEEEcccccccHHHHHHHHHcccEEEEcccccccEEEEcccccccHHHHHHHHccHHHHHccEEEcccEEEEEEccccEEEEEEccccHEEccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEcccccccccccccHHHHHHHHHHHcHcHcccccccccccccccccccccccccccccccccHHHHHHEHEEcc
mgscfsaesrspipgspsspglgirkrkssrkklgsrnpsfdyrreeplhripgrlflngsSEIASLFTqqgkkgtnqDAMIVWENFASradtifcgvfdghgpyghMVAKRvrdslplklsshwevnitsEEVLREISINtagsinsedtsfvsadeeprasadleeteKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGqhlvignvgdsravlgtrdkddSLVAMQLTvdlkpnlpaEAERIRKCKGrvfalhdepevarvwlpnydspglAMARAFGDfclkdfglisvpdisyrrltdkdeFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRrkyptskvddcAVVCLFLdsnsntngistssTFKMKEQltsaqpacpgqelseplvmKKYTLKKVKMMLRSWTIQIQIGPLLKECLVLILS
mgscfsaesrspipgspsspglgirkrkssrkklgsrnpsfdyrreeplhripgRLFLNGSSEIASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINtagsinsedtsfVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLtvdlkpnlpaeAERIRKCKGRVfalhdepevarVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVasaparssaarSLVESAVRAWRrkyptskvddcAVVCLFLDSNSNTNGISTSSTFKMKEQLTSAQpacpgqelseplVMKKYTLKKVKMMLRSWTiqiqigpllKECLVLILS
MGSCFSAEsrspipgspsspglgirkrkssrkklgsrNPSFDYRREEPLHRIPGRLFLNGSSEIASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVasaparssaarsLVESAVRAWRRKYPTSKVDDCAVVCLFLDsnsntngistsstFKMKEQLTSAQPACPGQELSEPLVMKKYTLKKVKMMLRSWTIQIQIGPLLKECLVLILS
****************************************************PGRLFLNGSSEIASLFTQ****GTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISIN*******************************PEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASA********SLVESAVRAWRRKYPTSKVDDCAVVCLFLD***********************************LVMKKYTLKKVKMMLRSWTIQIQIGPLLKECLVLIL*
*GSC*******************************************************GSSEIASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEV**************************************PEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLF***************************************************************LLKECLVLILS
**************************************PSFDYRREEPLHRIPGRLFLNGSSEIASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSE******************ETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASA*************AVRAWRRKYPTSKVDDCAVVCLFLDSNSNTNGISTSSTFKMKEQLTSAQPACPGQELSEPLVMKKYTLKKVKMMLRSWTIQIQIGPLLKECLVLILS
**********************************************EPLHRIPGRLFLNGSSEIASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNI******************************************FPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLFLDSN******************************************************IQIGPLLKECLVLILS
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGSCFSAESRSPIPGSPSSPGLGIRKRKSSRKKLGSRNPSFDYRREEPLHRIPGRLFLNGSSEIASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLFLDSNSNTNGISTSSTFKMKEQLTSAQPACPGQELSEPLVMKKYTLKKVKMMLRSWTIQIQIGPLLKECLVLILS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query456 2.2.26 [Sep-21-2011]
Q9M8R7492 Probable protein phosphat yes no 0.879 0.815 0.757 1e-179
Q9FG61448 Probable protein phosphat no no 0.787 0.801 0.688 1e-146
Q9SA22491 Probable protein phosphat no no 0.745 0.692 0.638 1e-133
Q6ZKL8531 Probable protein phosphat yes no 0.839 0.721 0.581 1e-130
Q8RXZ4504 Probable protein phosphat no no 0.835 0.755 0.543 1e-129
Q6K6N7518 Probable protein phosphat no no 0.791 0.696 0.605 1e-124
Q2R637432 Probable protein phosphat no no 0.732 0.773 0.621 1e-121
Q7XW27460 Probable protein phosphat no no 0.721 0.715 0.616 1e-117
Q9LR65462 Probable protein phosphat no no 0.881 0.870 0.525 1e-113
Q8GY60468 Probable protein phosphat no no 0.798 0.777 0.541 1e-111
>sp|Q9M8R7|P2C33_ARATH Probable protein phosphatase 2C 33 OS=Arabidopsis thaliana GN=PPC6-1 PE=1 SV=1 Back     alignment and function desciption
 Score =  626 bits (1615), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 312/412 (75%), Positives = 360/412 (87%), Gaps = 11/412 (2%)

Query: 1   MGSCFSAESRSPIPGSPSSPGLGIRKRKSSRKKLGSRNPSFDYRREEPLHRIPGRLFLNG 60
           MGSC SAESRSP PGSP SP   +RKRK+S+K+ GSRN SFDYRREEPL+++PGR+FLNG
Sbjct: 1   MGSCLSAESRSPRPGSPCSPAFSVRKRKNSKKRPGSRNSSFDYRREEPLNQVPGRMFLNG 60

Query: 61  SSEIASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLK 120
           S+E+A ++TQQGKKG NQDAM+VWENF SR DTIFCGVFDGHGPYGHMVAKRVRD+LPLK
Sbjct: 61  STEVACIYTQQGKKGPNQDAMVVWENFGSRTDTIFCGVFDGHGPYGHMVAKRVRDNLPLK 120

Query: 121 LSSHWEVNITSEEVLREISINTAGSINS----EDTS----FVSADEEPRASADLEE--TE 170
           LS++WE  +  E VL+ I+ +T  ++ +    ED +    FV+A+EEPR SAD+EE  TE
Sbjct: 121 LSAYWEAKVPVEGVLKAITTDTVNNVTNINNPEDAAAAAAFVTAEEEPRTSADMEEENTE 180

Query: 171 KFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAV 230
             PE FQTLKESFLKAFKVMDREL+ H ++DCFCSGTTAVTLIKQGQ+LV+GNVGDSRAV
Sbjct: 181 TQPELFQTLKESFLKAFKVMDRELKFHGSVDCFCSGTTAVTLIKQGQYLVVGNVGDSRAV 240

Query: 231 LGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLA 290
           +GTRD +++LVA+QLTVDLKPNLPAEAERIRKC+GRVFAL DEPEV RVWLPN DSPGLA
Sbjct: 241 MGTRDSENTLVAVQLTVDLKPNLPAEAERIRKCRGRVFALRDEPEVCRVWLPNCDSPGLA 300

Query: 291 MARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARS 350
           MARAFGDFCLKDFGLISVPD+S+R+LT+KDEFIVLATDGIWDVLSNE+VV IVASAP+RS
Sbjct: 301 MARAFGDFCLKDFGLISVPDVSFRQLTEKDEFIVLATDGIWDVLSNEDVVAIVASAPSRS 360

Query: 351 SAARSLVESAVRAWRRKYPTSKVDDCAVVCLFLDSNSNTNGISTSSTFKMKE 402
           SAAR+LVESAVRAWR KYPTSKVDDCA VCL+LDS SNTN IST+S+    E
Sbjct: 361 SAARALVESAVRAWRYKYPTSKVDDCAAVCLYLDS-SNTNAISTASSISKLE 411

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q9FG61|P2C74_ARATH Probable protein phosphatase 2C 74 OS=Arabidopsis thaliana GN=At5g36250 PE=2 SV=1 Back     alignment and function description
>sp|Q9SA22|P2C06_ARATH Probable protein phosphatase 2C 6 OS=Arabidopsis thaliana GN=At1g16220 PE=2 SV=1 Back     alignment and function description
>sp|Q6ZKL8|P2C66_ORYSJ Probable protein phosphatase 2C 66 OS=Oryza sativa subsp. japonica GN=Os08g0500300 PE=2 SV=1 Back     alignment and function description
>sp|Q8RXZ4|P2C18_ARATH Probable protein phosphatase 2C 18 OS=Arabidopsis thaliana GN=At1g79630 PE=2 SV=1 Back     alignment and function description
>sp|Q6K6N7|P2C14_ORYSJ Probable protein phosphatase 2C 14 OS=Oryza sativa subsp. japonica GN=Os02g0471500 PE=2 SV=1 Back     alignment and function description
>sp|Q2R637|P2C75_ORYSJ Probable protein phosphatase 2C 75 OS=Oryza sativa subsp. japonica GN=Os11g0417400 PE=2 SV=1 Back     alignment and function description
>sp|Q7XW27|P2C38_ORYSJ Probable protein phosphatase 2C 38 OS=Oryza sativa subsp. japonica GN=Os04g0321800 PE=2 SV=2 Back     alignment and function description
>sp|Q9LR65|P2C01_ARATH Probable protein phosphatase 2C 1 OS=Arabidopsis thaliana GN=PPC6-6 PE=1 SV=1 Back     alignment and function description
>sp|Q8GY60|P2C52_ARATH Probable protein phosphatase 2C 52 OS=Arabidopsis thaliana GN=At4g03415 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query456
255547560499 protein phosphatase-2c, putative [Ricinu 0.899 0.821 0.837 0.0
224144954493 predicted protein [Populus trichocarpa] 0.912 0.843 0.811 0.0
224128904482 predicted protein [Populus trichocarpa] 0.912 0.863 0.821 0.0
356531890489 PREDICTED: probable protein phosphatase 0.888 0.828 0.787 0.0
356568499487 PREDICTED: probable protein phosphatase 0.885 0.829 0.791 0.0
297735253461 unnamed protein product [Vitis vinifera] 0.899 0.889 0.795 0.0
225430932486 PREDICTED: probable protein phosphatase 0.899 0.843 0.795 0.0
297832908490 phosphatase 2C family protein [Arabidops 0.870 0.810 0.778 1e-179
15232961492 putative protein phosphatase 2C 33 [Arab 0.879 0.815 0.757 1e-177
449442279484 PREDICTED: probable protein phosphatase 0.872 0.822 0.772 1e-176
>gi|255547560|ref|XP_002514837.1| protein phosphatase-2c, putative [Ricinus communis] gi|223545888|gb|EEF47391.1| protein phosphatase-2c, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  724 bits (1869), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/412 (83%), Positives = 378/412 (91%), Gaps = 2/412 (0%)

Query: 1   MGSCFSAESRSPIPGSPSSPGLGIRKRKSSRKKLGSRNPSFDYRREEPLHRIPGRLFLNG 60
           MGSC SAESRSP PG+PSSPG G+RK+K+S+K+ GSRN SFDYRREEPLHRIPGRLFLNG
Sbjct: 1   MGSCLSAESRSPRPGTPSSPGFGVRKKKNSKKRPGSRNSSFDYRREEPLHRIPGRLFLNG 60

Query: 61  SSEIASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLK 120
           SS+IASLFTQQG+KGTNQDAMIVWENF SR DT+FCGVFDGHGPYGHMVAKRVRD LPLK
Sbjct: 61  SSDIASLFTQQGRKGTNQDAMIVWENFGSRTDTVFCGVFDGHGPYGHMVAKRVRDHLPLK 120

Query: 121 LSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLK 180
           LS+HWEVNITSE+VL+EIS+NTAGS+NSEDT+FVSADEE RAS DL++T K PE FQTLK
Sbjct: 121 LSAHWEVNITSEDVLKEISLNTAGSMNSEDTTFVSADEESRASVDLDDTVKHPEIFQTLK 180

Query: 181 ESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSL 240
           ESFLKAFKVMDRELR+HA IDCFCSGTTAVTLIKQG++LV+GNVGDSRAVLGTRDKDDSL
Sbjct: 181 ESFLKAFKVMDRELRIHANIDCFCSGTTAVTLIKQGRNLVVGNVGDSRAVLGTRDKDDSL 240

Query: 241 VAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCL 300
           VA+QLTVDLKPNLPAEAERIRKCKGRVFAL DEPEVARVWLPN DSPGLAMARAFGDFCL
Sbjct: 241 VAVQLTVDLKPNLPAEAERIRKCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCL 300

Query: 301 KDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESA 360
           KDFGLISVPD+S+RRL++KDEFIVLATDGIWDVLSN+EVV+IVAS P R SAAR+LVESA
Sbjct: 301 KDFGLISVPDVSFRRLSEKDEFIVLATDGIWDVLSNKEVVDIVASVPTRPSAARALVESA 360

Query: 361 VRAWRRKYPTSKVDDCAVVCLFLDSN--SNTNGISTSSTFKMKEQLTSAQPA 410
           VRAWR KYPTSKVDDCAVVCLFLDSN  S  + ++ +S    KEQ TS   A
Sbjct: 361 VRAWRYKYPTSKVDDCAVVCLFLDSNNVSTASTVNANSNINTKEQPTSEDQA 412

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224144954|ref|XP_002325473.1| predicted protein [Populus trichocarpa] gi|118486776|gb|ABK95223.1| unknown [Populus trichocarpa] gi|222862348|gb|EEE99854.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224128904|ref|XP_002328995.1| predicted protein [Populus trichocarpa] gi|222839229|gb|EEE77580.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356531890|ref|XP_003534509.1| PREDICTED: probable protein phosphatase 2C 33-like [Glycine max] Back     alignment and taxonomy information
>gi|356568499|ref|XP_003552448.1| PREDICTED: probable protein phosphatase 2C 33-like [Glycine max] Back     alignment and taxonomy information
>gi|297735253|emb|CBI17615.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225430932|ref|XP_002277393.1| PREDICTED: probable protein phosphatase 2C 33 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297832908|ref|XP_002884336.1| phosphatase 2C family protein [Arabidopsis lyrata subsp. lyrata] gi|297330176|gb|EFH60595.1| phosphatase 2C family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15232961|ref|NP_186924.1| putative protein phosphatase 2C 33 [Arabidopsis thaliana] gi|79295498|ref|NP_001030624.1| putative protein phosphatase 2C 33 [Arabidopsis thaliana] gi|75186497|sp|Q9M8R7.1|P2C33_ARATH RecName: Full=Probable protein phosphatase 2C 33; Short=AtPP2C33; AltName: Full=AtPPC6;1 gi|6728987|gb|AAF26985.1|AC018363_30 putative protein phosphatase-2C (PP2C) [Arabidopsis thaliana] gi|58652052|gb|AAW80851.1| At3g02750 [Arabidopsis thaliana] gi|115311509|gb|ABI93935.1| At3g02750 [Arabidopsis thaliana] gi|332640333|gb|AEE73854.1| putative protein phosphatase 2C 33 [Arabidopsis thaliana] gi|332640334|gb|AEE73855.1| putative protein phosphatase 2C 33 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449442279|ref|XP_004138909.1| PREDICTED: probable protein phosphatase 2C 33-like [Cucumis sativus] gi|449506270|ref|XP_004162700.1| PREDICTED: probable protein phosphatase 2C 33-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query456
TAIR|locus:2183612448 PP2C74 "AT5G36250" [Arabidopsi 0.752 0.765 0.681 7.8e-126
TAIR|locus:2020863462 AT1G03590 [Arabidopsis thalian 0.607 0.599 0.587 1.3e-115
TAIR|locus:2032880491 AT1G16220 [Arabidopsis thalian 0.717 0.665 0.633 1.5e-113
TAIR|locus:2019868504 AT1G79630 [Arabidopsis thalian 0.739 0.668 0.597 3.8e-110
TAIR|locus:504955459468 PP2C52 "AT4G03415" [Arabidopsi 0.793 0.773 0.531 3.3e-102
TAIR|locus:2143325373 AT5G27930 [Arabidopsis thalian 0.480 0.587 0.534 3.1e-85
TAIR|locus:2078117358 AT3G05640 [Arabidopsis thalian 0.517 0.659 0.512 2.5e-83
TAIR|locus:2086755351 AT3G16800 [Arabidopsis thalian 0.480 0.623 0.513 3.2e-77
TAIR|locus:2180612331 AT5G26010 [Arabidopsis thalian 0.432 0.595 0.552 6.8e-69
TAIR|locus:2149775382 AT5G01700 [Arabidopsis thalian 0.543 0.649 0.511 2.6e-63
TAIR|locus:2183612 PP2C74 "AT5G36250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1236 (440.2 bits), Expect = 7.8e-126, P = 7.8e-126
 Identities = 235/345 (68%), Positives = 277/345 (80%)

Query:    40 SFDYRREEPLHRIPGRLFLNGSSEIASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVF 99
             SFD   E  LHRIPGR+FLNGS++  SLF+QQGKKG NQDAMIVWENF S  DT+FCGVF
Sbjct:    43 SFDNTEEPLLHRIPGRMFLNGSTDTVSLFSQQGKKGPNQDAMIVWENFGSMEDTVFCGVF 102

Query:   100 DGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEE 159
             DGHGPYGH+VAKRVRD LPLKL SH E  ++ EEVL+EIS+NT     SED   +SA+ E
Sbjct:   103 DGHGPYGHIVAKRVRDLLPLKLGSHLESYVSPEEVLKEISLNTDDRKISEDLVHISANGE 162

Query:   160 PRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHL 219
              R     ++  K  +  Q L  S +KA++ MD+EL+M   +DCFCSGTTAVT++KQGQHL
Sbjct:   163 SRVYN--KDYVKDQDMIQMLIGSIVKAYRFMDKELKMQVDVDCFCSGTTAVTMVKQGQHL 220

Query:   220 VIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARV 279
             VIGN+GDSRAVLG R+KD+ LV  QLT DLKP++PAEAERI++C+GR+FAL DEP VAR+
Sbjct:   221 VIGNIGDSRAVLGVRNKDNKLVPFQLTEDLKPDVPAEAERIKRCRGRIFALRDEPGVARL 280

Query:   280 WLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEV 339
             WLPN++SPGLAMARAFGDFCLKDFGLISVPD+SYRRLT+KDEF+VLATDGIWD L+NEEV
Sbjct:   281 WLPNHNSPGLAMARAFGDFCLKDFGLISVPDVSYRRLTEKDEFVVLATDGIWDALTNEEV 340

Query:   340 VEIVXXXXXXXXXXXXLVESAVRAWRRKYPTSKVDDCAVVCLFLD 384
             V+IV            LVE+AVR WR K+PTSKVDDCAVVCLFLD
Sbjct:   341 VKIVAKAPTRSSAGRALVEAAVRNWRWKFPTSKVDDCAVVCLFLD 385
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS
GO:0005739 "mitochondrion" evidence=ISM
GO:0005634 "nucleus" evidence=IDA
GO:0004721 "phosphoprotein phosphatase activity" evidence=IDA
GO:0005515 "protein binding" evidence=IPI
GO:0005886 "plasma membrane" evidence=IDA
GO:0006470 "protein dephosphorylation" evidence=IDA
TAIR|locus:2020863 AT1G03590 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032880 AT1G16220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2019868 AT1G79630 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955459 PP2C52 "AT4G03415" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143325 AT5G27930 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078117 AT3G05640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086755 AT3G16800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2180612 AT5G26010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149775 AT5G01700 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9M8R7P2C33_ARATH3, ., 1, ., 3, ., 1, 60.75720.87930.8150yesno
Q6ZKL8P2C66_ORYSJ3, ., 1, ., 3, ., 1, 60.58160.83990.7212yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!
3rd Layer3.1.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query456
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 8e-73
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 2e-57
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 2e-41
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 1e-27
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 1e-20
PTZ00224381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 9e-17
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  229 bits (586), Expect = 8e-73
 Identities = 105/325 (32%), Positives = 146/325 (44%), Gaps = 77/325 (23%)

Query: 64  IASLFTQQGKKGTNQDAMIVWENFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSS 123
            A +  + G + TN+DA+++  N  +  D    GVFDGHG  GH   +     L      
Sbjct: 2   SAGVSDKGGDRKTNEDAVVIKPNL-NNEDGGLFGVFDGHG--GHAAGEFASKLLV----- 53

Query: 124 HWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESF 183
                   EE+L E+                               E      + ++E+ 
Sbjct: 54  --------EELLEELE------------------------------ETLTLSEEDIEEAL 75

Query: 184 LKAFKVMDRELRMHAT--IDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLV 241
            KAF   D E+   A    D   SGTTAV  + +G  L + NVGDSRAVL    +     
Sbjct: 76  RKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGE----- 130

Query: 242 AMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLK 301
           A+QLT D KP    E ERI K  GRV                     LA+ RA GDF LK
Sbjct: 131 AVQLTKDHKPVNEEERERIEKAGGRVS-------------NGRVPGVLAVTRALGDFDLK 177

Query: 302 DFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARSS---AARSLVE 358
             G+ + PD++  +LT+ D+F++LA+DG+WDVLSN+E V+IV S  A+     AA+ LV+
Sbjct: 178 -PGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVD 236

Query: 359 SAVRAWRRKYPTSKVDDCAVVCLFL 383
            A+R           D+  VV + L
Sbjct: 237 LALRRGSH-------DNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 456
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PTZ00224381 protein phosphatase 2C; Provisional 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.97
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.88
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.85
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.83
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.73
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.53
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.4
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.18
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information 
Probab=100.00  E-value=7.9e-50  Score=403.24  Aligned_cols=248  Identities=31%  Similarity=0.526  Sum_probs=210.0

Q ss_pred             eeeeecCCCCCCCCcceeeecccCC--------CCCceEEEeecCCCCCchHHHHHHHHHhHHHHHhhhhhhcchhhHHH
Q 012769           65 ASLFTQQGKKGTNQDAMIVWENFAS--------RADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLR  136 (456)
Q Consensus        65 ~~~~s~~G~R~~NED~~~v~~~~~~--------~~~~~l~gV~DGhG~~G~~aa~~a~~~l~~~L~~~~~~~~~~~~~~~  136 (456)
                      ++.+|++|.|..|||++++..++..        ..+..|||||||||  |+.+|++|++.+++.|.+....         
T Consensus        67 ~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhG--G~~age~as~~l~~~i~~~~~~---------  135 (365)
T PLN03145         67 SGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHG--GKHAADFACYHLPRFIVEDEDF---------  135 (365)
T ss_pred             EEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCC--CHHHHHHHHHHHHHHHHhhhcc---------
Confidence            5788999999999999988765421        12468999999999  9999999999999988642110         


Q ss_pred             HhhccccCCCCcccccccccCCccccccchhhhccChhHHHHHHHHHHHHHHHHHHHHHhhhccc-ccCCCceEEEEEEe
Q 012769          137 EISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATID-CFCSGTTAVTLIKQ  215 (456)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~~~~l~~~~~~~-~~~~GTTav~~li~  215 (456)
                                                             ...++++|.++|..+|+.+......+ ...||||++++++.
T Consensus       136 ---------------------------------------~~~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~  176 (365)
T PLN03145        136 ---------------------------------------PREIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVV  176 (365)
T ss_pred             ---------------------------------------chhHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEE
Confidence                                                   02356778888888888886643322 34699999999999


Q ss_pred             CCEEEEEEeCCceeEEEEeCCCCceEEEEecCCCCCCCHHHHHHHHHcCcEEEeecCCCceeEEEccCCCCCCccccccC
Q 012769          216 GQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAF  295 (456)
Q Consensus       216 ~~~l~vanVGDSRayl~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvw~~~~~~~~L~ltRal  295 (456)
                      ++.+|||||||||||++++++     ++|||+||++..+.|+.||.+.||.+..       .|+      .|.+++||||
T Consensus       177 ~~~l~vaNvGDSRayl~r~g~-----~~~LT~DH~~~~~~E~~RI~~~Gg~v~~-------g~v------~g~l~vTRal  238 (365)
T PLN03145        177 GRSLVVANAGDCRAVLCRRGK-----AIEMSRDHKPMCSKERKRIEASGGYVYD-------GYL------NGQLNVARAL  238 (365)
T ss_pred             CCeEEEEecCCceEEEEcCCe-----EEEecCCCCCCCHHHHHHHHHcCCceec-------ceE------CCcccccccc
Confidence            999999999999999999876     8999999999999999999999998853       233      6778999999


Q ss_pred             CCcccccC------CccccceEEEEEeCCCCeEEEEEcCCCcCCCCHHHHHHHHH----cCCCHHHHHHHHHHHHHHHhh
Q 012769          296 GDFCLKDF------GLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVA----SAPARSSAARSLVESAVRAWR  365 (456)
Q Consensus       296 Gd~~~K~~------gv~~~Pdv~~~~L~~~D~fLvLaSDGlwd~ls~~ei~~iv~----~~~~~~~aA~~Lv~~A~~~~~  365 (456)
                      ||+.+|.+      +++++||+..++|+++|.|||||||||||+|+++++++++.    ...+++++|+.|++.|+.+  
T Consensus       239 GD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~r--  316 (365)
T PLN03145        239 GDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEALKR--  316 (365)
T ss_pred             ccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhC--
Confidence            99988754      47899999999999999999999999999999999876653    4568999999999999999  


Q ss_pred             hhCCCCCCCcEEEEEEEcCCCC
Q 012769          366 RKYPTSKVDDCAVVCLFLDSNS  387 (456)
Q Consensus       366 ~~~~~g~~DNiTvIvv~l~~~~  387 (456)
                           ++.||||||||+|+..+
T Consensus       317 -----gs~DNITvIVV~l~~~~  333 (365)
T PLN03145        317 -----KSGDNLAVVVVCFQSQP  333 (365)
T ss_pred             -----CCCCCEEEEEEEeecCC
Confidence                 99999999999999643

>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query456
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 2e-18
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 2e-18
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 3e-18
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 3e-18
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 3e-18
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 4e-18
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 3e-17
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 3e-17
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 2e-16
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 5e-16
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 1e-15
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 2e-15
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 2e-15
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 6e-14
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 8e-14
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 4e-13
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 4e-13
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 1e-12
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 4e-12
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 1e-05
2irm_A358 Crystal Structure Of Mitogen-Activated Protein Kina 7e-04
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure 
Iteration: 1

 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 121/249 (48%), Gaps = 41/249 (16%)
Query: 95  FCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTA-GSINSEDTSF 153
           F GV+DGHG  GH VA   RD L   L+   E+    +E+ +    NT  G     D  F
Sbjct: 64  FFGVYDGHG--GHKVADYCRDRLHFALAE--EIERIKDELCKR---NTGEGRQVQWDKVF 116
Query: 154 VSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLI 213
            S       + D E   K         +  L+A             +     G+TAV  +
Sbjct: 117 TSC----FLTVDGEIEGKIGRAVVGSSDKVLEA-------------VASETVGSTAVVAL 159
Query: 214 KQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDE 273
               H+V+ N GDSRAVL  R K+    AM L+VD KP+   E  RI    G+V     +
Sbjct: 160 VCSSHIVVSNCGDSRAVL-FRGKE----AMPLSVDHKPDREDEYARIENAGGKVI----Q 210
Query: 274 PEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDV 333
            + ARV+        LAM+R+ GD  LK + +I  P++++   + +DE ++LA+DG+WDV
Sbjct: 211 WQGARVFGV------LAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDV 263
Query: 334 LSNEEVVEI 342
           ++N+EV EI
Sbjct: 264 MNNQEVCEI 272
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 7 Interacting Protein 1 From Anopheles Gambiae Length = 358 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query456
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 1e-111
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 1e-73
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 9e-64
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 4e-61
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 7e-60
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 2e-59
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 4e-59
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 2e-55
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 4e-54
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 5e-54
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 2e-52
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 3e-45
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 1e-43
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-04
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 1e-11
1txo_A237 Putative bacterial enzyme; serine/threonine protei 3e-11
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 1e-10
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 7e-10
3rnr_A211 Stage II sporulation E family protein; structural 4e-08
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
 Score =  330 bits (848), Expect = e-111
 Identities = 85/348 (24%), Positives = 148/348 (42%), Gaps = 45/348 (12%)

Query: 47  EPLHRIPGRLFLNGSSEIASLFTQQGKKGTNQDAMIVWENFA-SRADTIFCGVFDGHGPY 105
            P   +P       + + A++FT  G +   +D   +       R D  F GVFDG    
Sbjct: 7   PPTIHVPLPPTSYPAFD-AAIFTDIGGRKHQEDRFTLCPQLVPGRDDCAFFGVFDGTV-- 63

Query: 106 GHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASAD 165
           G   ++ V+D +  +L S                                 +      +D
Sbjct: 64  GDFASENVKDLVVPQLISSPA----------------------------WQEVTEMLRSD 95

Query: 166 LEETEKFPEFFQTLKESFLKAFKVMDRE-LRMHATIDCFCSGTTAVTLIKQGQHLVIGNV 224
           +  TE   +  Q L ++    +K  D E ++M   ++   + +T+VT +     + +G++
Sbjct: 96  VPATEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTAVLAKGFVAVGHL 155

Query: 225 GDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNY 284
           GDSR  +G     + L    LTVD KP++P E  RI +  G V  LH+      +   ++
Sbjct: 156 GDSRIAMGVET-PNGLNCEFLTVDHKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIRGGDF 214

Query: 285 D--------SPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSN 336
                       L  +RAFG   LK +GL + PD+   R+T +   ++LATDG+WDV+S 
Sbjct: 215 SFRKSRGEQPMQLQYSRAFGGKDLKMYGLSNQPDVRVVRVTPQHRVMILATDGLWDVMSA 274

Query: 337 EEVVEIVASAPAR-SSAARSLVESAVRAWRRKYPTSKVDDCAVVCLFL 383
            + VEI   A     + A++LVE  +   + +  ++  D+   + +F 
Sbjct: 275 AQAVEIAMQARQEGRNPAQALVEMTLAEQQSRNQSA--DNITAMTVFF 320
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query456
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.86
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.81
3f79_A255 Probable two-component response regulator; adaptor 99.66
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.66
3ke6_A399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.18
3eq2_A394 Probable two-component response regulator; adaptor 98.27
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
Probab=100.00  E-value=1.2e-48  Score=390.01  Aligned_cols=264  Identities=31%  Similarity=0.474  Sum_probs=220.0

Q ss_pred             ccceeeeeecCCCCCCCCcceeeecccCC-------------CCCceEEEeecCCCCCchHHHHHHHHHhHHHHHhhhhh
Q 012769           61 SSEIASLFTQQGKKGTNQDAMIVWENFAS-------------RADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEV  127 (456)
Q Consensus        61 ~~~~~~~~s~~G~R~~NED~~~v~~~~~~-------------~~~~~l~gV~DGhG~~G~~aa~~a~~~l~~~L~~~~~~  127 (456)
                      .-..++++|++|+|..|||++++..++..             ..+..||+||||||  |+.++++|++.++..|.+.+..
T Consensus         7 ~~~~~g~~s~~G~R~~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~G--G~~~~~~as~~~~~~l~~~~~~   84 (316)
T 3kdj_B            7 SVPLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHG--GSQVANYCRERMHLALAEEIAK   84 (316)
T ss_dssp             ---CEEEEEECTTSSSCCEEEEEETTCC-----------CCGGGGCEEEEEEEEES--SSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCeEEEEEeEeCCCCCccceeeecccccccccccccccccCCCCeEEEEEEeCCC--cHHHHHHHHHHHHHHHHHHHHh
Confidence            34568899999999999999999766432             23678999999999  9999999999999999887765


Q ss_pred             hcchhhHHHHhhccccCCCCcccccccccCCccccccchhhhccChhHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCc
Q 012769          128 NITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGT  207 (456)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~~~~l~~~~~~~~~~~GT  207 (456)
                      ......                                     ........+++++.++|..+++++....   ...+||
T Consensus        85 ~~~~~~-------------------------------------~~~~~~~~~~~~l~~a~~~~~~~~~~~~---~~~~Gt  124 (316)
T 3kdj_B           85 EKPMLS-------------------------------------DGDTWLEKWKKALFNSFLRVDSEIESVA---PETVGS  124 (316)
T ss_dssp             HCCCGG-------------------------------------GTHHHHHHHHHHHHHHHHHHHHHGGGTS---CTTCEE
T ss_pred             hhcccc-------------------------------------cccchHHHHHHHHHHHHHHHHHHHhccc---CCCCCC
Confidence            332100                                     0112335678899999999999986543   357999


Q ss_pred             eEEEEEEeCCEEEEEEeCCceeEEEEeCCCCceEEEEecCCCCCCCHHHHHHHHHcCcEEEeecCCCceeEEEccCCCCC
Q 012769          208 TAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSP  287 (456)
Q Consensus       208 Tav~~li~~~~l~vanVGDSRayl~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvw~~~~~~~  287 (456)
                      |++++++.++++|+|||||||+|++|+++     ++|||.||++..+.|+.||...+|.+.....    .|+      .+
T Consensus       125 T~~~~~i~~~~l~vanvGDSR~yl~r~g~-----~~~lT~DH~~~~~~e~~ri~~~~g~v~~~~~----~r~------~g  189 (316)
T 3kdj_B          125 TSVVAVVFPSHIFVANCGDSRAVLCRGKT-----ALPLSVDHKPDREDEAARIEAAGGKVIQWNG----ARV------FG  189 (316)
T ss_dssp             CEEEEEECSSEEEEEEESSCEEEEEETTE-----EEESCCCCCTTSHHHHHHHHHTTCCEEESSS----EEE------TT
T ss_pred             cEEEEEEECCEEEEEEccCCEEEEEECCE-----ecccCCCCCCCCHHHHHHHHHcCCeEEecCC----ceE------cc
Confidence            99999999999999999999999999875     9999999999999999999999998865321    355      78


Q ss_pred             CccccccCCCcccccCCccccceEEEEEeCCCCeEEEEEcCCCcCCCCHHHHHHHHHc----------------------
Q 012769          288 GLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVAS----------------------  345 (456)
Q Consensus       288 ~L~ltRalGd~~~K~~gv~~~Pdv~~~~L~~~D~fLvLaSDGlwd~ls~~ei~~iv~~----------------------  345 (456)
                      .|++||+|||..+|++ ++++|++..+.+.+.++|||||||||||+|+++||+++++.                      
T Consensus       190 ~l~~sRalGd~~~~~~-~~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (316)
T 3kdj_B          190 VLAMSRSIGDRYLKPS-IIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGGASLLADER  268 (316)
T ss_dssp             TBSCSBCEECGGGTTT-SBCCCEEEEEECCTTEEEEEEECHHHHTSSCHHHHHHHHHHHHHHHTTC--------------
T ss_pred             eeccccccCccccCCC-cCCCCceEEEEecCCCCEEEEEccCcccCCCHHHHHHHHHHHhhhhccccccccccccccccc
Confidence            9999999999999997 99999999999555555999999999999999999999976                      


Q ss_pred             -----CCCHHHHHHHHHHHHHHHhhhhCCCCCCCcEEEEEEEcCCCCCC
Q 012769          346 -----APARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLFLDSNSNT  389 (456)
Q Consensus       346 -----~~~~~~aA~~Lv~~A~~~~~~~~~~g~~DNiTvIvv~l~~~~~~  389 (456)
                           ..+++.+|+.|++.|+.+       |+.||||||||+|...+..
T Consensus       269 ~~~~~~~~~~~aa~~Lv~~A~~~-------g~~DNiTvivv~l~~~~~~  310 (316)
T 3kdj_B          269 RKEGKDPAAMSAAEYLSKLAIQR-------GSKDNISVVVVDLKPRRKL  310 (316)
T ss_dssp             ---CCCHHHHHHHHHHHHHHHHT-------TCCSCEEEEEEECSCC---
T ss_pred             cccccCchHHHHHHHHHHHHHHc-------CCCCCeEEEEEEccCCCcc
Confidence                 245789999999999999       9999999999999876544
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 456
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 6e-31
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 2e-13
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (297), Expect = 6e-31
 Identities = 72/331 (21%), Positives = 119/331 (35%), Gaps = 83/331 (25%)

Query: 71  QGKKGTNQDAMIVWENFAS-RADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNI 129
           QG +   +DA        S      F  V+DGH   G  VAK   + L   ++++ +   
Sbjct: 29  QGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEHLLDHITNNQDFKG 86

Query: 130 TSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKV 189
           ++                                             + +K      F  
Sbjct: 87  SAGA----------------------------------------PSVENVKNGIRTGFLE 106

Query: 190 MDRELRMHA--TIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTV 247
           +D  +R+ +        SG+TAV ++   QH    N GDSR +L    K         T 
Sbjct: 107 IDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKV-----HFFTQ 161

Query: 248 DLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFG--- 304
           D KP+ P E ERI+   G               +    +  LA++RA GDF  K      
Sbjct: 162 DHKPSNPLEKERIQNAGGS-------------VMIQRVNGSLAVSRALGDFDYKCVHGKG 208

Query: 305 -----LISVPDISYRRLT-DKDEFIVLATDGIWDVLSNEEVVEIVASAPARSS----AAR 354
                +   P++     + + D+FI+LA DGIWDV+ NEE+ + V S    +        
Sbjct: 209 PTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCN 268

Query: 355 SLVESAVRAWRRKYPTSKVDDCAVVCLFLDS 385
            +V++ +    R       D+ +V+ +   +
Sbjct: 269 EVVDTCLYKGSR-------DNMSVILICFPN 292
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query456
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-51  Score=404.85  Aligned_cols=258  Identities=29%  Similarity=0.408  Sum_probs=220.1

Q ss_pred             ceeeeeecCCCCCCCCcceeeecccCC-CCCceEEEeecCCCCCchHHHHHHHHHhHHHHHhhhhhhcchhhHHHHhhcc
Q 012769           63 EIASLFTQQGKKGTNQDAMIVWENFAS-RADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISIN  141 (456)
Q Consensus        63 ~~~~~~s~~G~R~~NED~~~v~~~~~~-~~~~~l~gV~DGhG~~G~~aa~~a~~~l~~~L~~~~~~~~~~~~~~~~~~~~  141 (456)
                      -.+++.|.+|+|.+|||++++..++.. ..+..|||||||||  |+.+|++|++.++..|.+.+......          
T Consensus        21 ~~~g~~s~~G~R~~~ED~~~~~~~~~~~~~~~~lf~V~DGhG--G~~~s~~~~~~l~~~l~~~~~~~~~~----------   88 (295)
T d1a6qa2          21 LRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEHLLDHITNNQDFKGSA----------   88 (295)
T ss_dssp             EEEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEES--CSHHHHHHHHHHHHHHHTSHHHHCSS----------
T ss_pred             eEEEEEeCccCCCcccCeeEEEcccCCCCCceEEEEEEeCCC--ChHHHHHHHHHHHHHHHHhhhhcccc----------
Confidence            357888999999999999998776643 34678999999999  99999999999999998765443210          


Q ss_pred             ccCCCCcccccccccCCccccccchhhhccChhHHHHHHHHHHHHHHHHHHHHHhhhc--ccccCCCceEEEEEEeCCEE
Q 012769          142 TAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHAT--IDCFCSGTTAVTLIKQGQHL  219 (456)
Q Consensus       142 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~~~~l~~~~~--~~~~~~GTTav~~li~~~~l  219 (456)
                                                    .......+++++.++|..+++.+.....  .....+|||++++++.++++
T Consensus        89 ------------------------------~~~~~~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l  138 (295)
T d1a6qa2          89 ------------------------------GAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHT  138 (295)
T ss_dssp             ------------------------------SSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEE
T ss_pred             ------------------------------ccchHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEE
Confidence                                          1122355788889999999888765433  23567999999999999999


Q ss_pred             EEEEeCCceeEEEEeCCCCceEEEEecCCCCCCCHHHHHHHHHcCcEEEeecCCCceeEEEccCCCCCCccccccCCCcc
Q 012769          220 VIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFC  299 (456)
Q Consensus       220 ~vanVGDSRayl~r~~~~~~~~~~qLT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~Rvw~~~~~~~~L~ltRalGd~~  299 (456)
                      |||||||||+|+++++.     +++||.||+|..+.|++||...||.+..       .|+      ++.|++||||||+.
T Consensus       139 ~vanvGDSR~~l~~~~~-----~~~lT~dH~~~~~~E~~Ri~~~gg~v~~-------~r~------~g~l~~tRa~Gd~~  200 (295)
T d1a6qa2         139 YFINCGDSRGLLCRNRK-----VHFFTQDHKPSNPLEKERIQNAGGSVMI-------QRV------NGSLAVSRALGDFD  200 (295)
T ss_dssp             EEEEESSCEEEEEETTE-----EEEECCCCCTTSHHHHHHHHHTTCCEET-------TEE------TTTBSCSBCEECGG
T ss_pred             EEEecCCCeEEEeeccc-----ceeeccccCcccHHHHhhHhhcCCcccc-------ccc------CCceeeeeccCcHH
Confidence            99999999999999775     9999999999999999999999998753       344      88999999999999


Q ss_pred             cccCC--------ccccceEEEEEeC-CCCeEEEEEcCCCcCCCCHHHHHHHHHc----CCCHHHHHHHHHHHHHHHhhh
Q 012769          300 LKDFG--------LISVPDISYRRLT-DKDEFIVLATDGIWDVLSNEEVVEIVAS----APARSSAARSLVESAVRAWRR  366 (456)
Q Consensus       300 ~K~~g--------v~~~Pdv~~~~L~-~~D~fLvLaSDGlwd~ls~~ei~~iv~~----~~~~~~aA~~Lv~~A~~~~~~  366 (456)
                      +|..+        ++++||+..+.+. ++|.|||||||||||+|+++||+++|.+    ..+++.+|+.|++.|+.+   
T Consensus       201 ~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~---  277 (295)
T d1a6qa2         201 YKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYK---  277 (295)
T ss_dssp             GSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHT---
T ss_pred             hhhccccCcccccccccccceEEEeecccceeEeeecCcccccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhc---
Confidence            98654        9999999999886 5677999999999999999999999865    368999999999999999   


Q ss_pred             hCCCCCCCcEEEEEEEcCCCC
Q 012769          367 KYPTSKVDDCAVVCLFLDSNS  387 (456)
Q Consensus       367 ~~~~g~~DNiTvIvv~l~~~~  387 (456)
                          ++.||||||||+|+..+
T Consensus       278 ----gs~DNiTvivv~~~~~~  294 (295)
T d1a6qa2         278 ----GSRDNMSVILICFPNAP  294 (295)
T ss_dssp             ----TCCSCEEEEEEECTTSC
T ss_pred             ----CCCCCeEEEEEeccCCC
Confidence                99999999999998654
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure