BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012770
(456 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 191/438 (43%), Gaps = 55/438 (12%)
Query: 5 YGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGE 64
YGP++ +++G+K V+V LA +VL +G +F RP+ DI + N + + F G
Sbjct: 42 YGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGA 101
Query: 65 HWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVST---KGIVIRKRLQL 121
HW+ RR+ F + D ++ ++ ++ + ++T + I I + +
Sbjct: 102 HWQLHRRLAMATFAL------FKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFV 155
Query: 122 MLYNIMYRMMFDAKFESQEDPL-----FIEATRFNSERSRLAQSFEYNYGDFIPLLRPFL 176
+ N++ + F+ +++ + L + E N + L D +P L+ F
Sbjct: 156 AVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLV--------DLVPWLKIFP 207
Query: 177 RGYLNKCRDLQCRRLAFFNN---NFVEKRRKIMAANGEKHKISCAIDHIIDAQMKGE--- 230
L K + R N N+ EK R I+ +D ++ A+M +
Sbjct: 208 NKTLEKLKSHVKIRNDLLNKILENYKEKFR--------SDSITNMLDTLMQAKMNSDNGN 259
Query: 231 ---------ITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIS-TVL 280
+++ +++ + +I A +ETT ++W +A L+++P+V++K+ EI V
Sbjct: 260 AGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVG 319
Query: 281 KGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAW 340
T S+ + L L+A ++EVLRL P+L+PH ++ +G F + K +++++N W
Sbjct: 320 FSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLW 379
Query: 341 WLANNPXXXXXXXXXXXXXXXXXXCNIDAVAGGGKV--DFRYLPFGVGRRSCXXXXXXXX 398
L +N AG + YLPFG G RSC
Sbjct: 380 ALHHNEKEWHQPDQFMPERFLNP-------AGTQLISPSVSYLPFGAGPRSCIGEILARQ 432
Query: 399 XXXXXXXKLVTSFEMKAP 416
L+ F+++ P
Sbjct: 433 ELFLIMAWLLQRFDLEVP 450
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 181/449 (40%), Gaps = 48/449 (10%)
Query: 1 MAQIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDIFTGNGQDMVF- 59
M+Q YG V ++++GS ++V+S D Q L QG +F RP + T +GQ + F
Sbjct: 44 MSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLIT-DGQSLTFS 102
Query: 60 TVYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIRKRL 119
T G W RR+ T + + + ++ E VS + + RL
Sbjct: 103 TDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLE----------EHVSKEAKALISRL 152
Query: 120 QLMLY----------------NIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSFEY 163
Q ++ N++ M F F D + + + E A S
Sbjct: 153 QELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPESSDEM-LSLVKNTHEFVETASS--G 209
Query: 164 NYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHII 223
N DF P+LR L + + R L F E + +K+ + +
Sbjct: 210 NPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQEHYQDF-----DKNSVRDITGALF 264
Query: 224 DAQMKGE------ITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIS 277
KG I +E ++ +V +I A +T ++ W++ LV PE+Q+KI++E+
Sbjct: 265 KHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELD 324
Query: 278 TVL-KGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIV 336
TV+ + S+ +LPYL+A + E R + +P +PH + L GF IPK+ +
Sbjct: 325 TVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVF 384
Query: 337 VNAWWLANNPXXXXXXXXXXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSCXXXXXX 396
VN W + ++P D A + + + FG+G+R C
Sbjct: 385 VNQWQVNHDP----ELWEDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLA 440
Query: 397 XXXXXXXXXKLVTSFEMKAPQGIDKIDVS 425
L+ E P G+ K+D++
Sbjct: 441 KWEIFLFLAILLQQLEFSVPPGV-KVDLT 468
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 188/440 (42%), Gaps = 29/440 (6%)
Query: 1 MAQIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDIFTGNGQDMVFT 60
M+Q YG V ++++GS +VV+S D Q L QG +F RP F + + NGQ M F+
Sbjct: 39 MSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQGDDFKGRPDLYTFTLIS-NGQSMSFS 97
Query: 61 V-YGEHWRKMRRIMTLPFFTNKVVHN--------YSDMWEQEMDLVVHDLKNDYESVSTK 111
G W RR+ + + + + +E ++++ L+ E ++
Sbjct: 98 PDSGPVWAARRRLAQNGLKSFSIASDPASSTSCYLEEHVSKEAEVLISTLQ---ELMAGP 154
Query: 112 GIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSFEYNYGDFIP 170
G R ++ + N++ + F +++ L N+ + N DFIP
Sbjct: 155 GHFNPYRYVVVSVTNVICAICFGRRYDHNHQELLSLVNLNNNFGEVVGSG---NPADFIP 211
Query: 171 LLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMKG- 229
+LR LN +DL + F V++ K + I+H + Q+
Sbjct: 212 ILRYLPNPSLNAFKDLN-EKFYSFMQKMVKEHYKTFEKGHIRDITDSLIEHCQEKQLDEN 270
Query: 230 ---EITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVL-KGNPV 285
++++E +I IV ++ A +T ++ W++ LV +P VQ+KI+ E+ TV+ +
Sbjct: 271 ANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRP 330
Query: 286 TESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLANN 345
S+ LPY++A + E R + +P +PH + L GF IPK + VN W + ++
Sbjct: 331 RLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHD 390
Query: 346 PXXXXXXXXXXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSCXXXXXXXXXXXXXXX 405
ID V + + + FG+G+R C
Sbjct: 391 QKLWVNPSEFLPERFLTPDGAIDKV-----LSEKVIIFGMGKRKCIGETIARWEVFLFLA 445
Query: 406 KLVTSFEMKAPQGIDKIDVS 425
L+ E P G+ K+D++
Sbjct: 446 ILLQRVEFSVPLGV-KVDMT 464
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 167/369 (45%), Gaps = 37/369 (10%)
Query: 1 MAQIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDIFTGNGQDMVFT 60
+A+ YG VF+++LGS +VV++ Q L QG F RP F + +G G+ M F
Sbjct: 37 LARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFRVVSG-GRSMAFG 95
Query: 61 VYGEHWRKMRRI---MTLPFFTNK-----VVHNYSDMWEQEMDLVVHDLKNDYESVSTKG 112
Y EHW+ RR M FFT + V+ + +E+ ++ D + +
Sbjct: 96 HYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRP 155
Query: 113 IVIRKRLQLMLYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSFEYNYGDFIPLL 172
+ + + + N+M + F ++ S +DP F E N E R + G + ++
Sbjct: 156 LTV-----VAVANVMSAVCFGCRY-SHDDPEFRELLSHNEEFGRTVGA-----GSLVDVM 204
Query: 173 RPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDA------- 225
P+L+ + N R + R N NF + E + A ++DA
Sbjct: 205 -PWLQYFPNPVRTV-FREFEQLNRNFSNFILDKFLRHCESLRPGAAPRDMMDAFILSAEK 262
Query: 226 QMKGE-------ITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
+ G+ + ENV + +I A+ +T +++W + +P+VQ +++ E+
Sbjct: 263 KAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQ 322
Query: 279 VLKGNPV-TESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVV 337
V+ + + + LPY+ A + E +R + +P+ +PH + G+ IPK++ + V
Sbjct: 323 VVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFV 382
Query: 338 NAWWLANNP 346
N W + ++P
Sbjct: 383 NQWSVNHDP 391
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 159/350 (45%), Gaps = 25/350 (7%)
Query: 2 AQIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDIFTGNGQDMVFTV 61
+Q+YG +F L LG + VV++ D+ + L Q F RP +F T G ++ +
Sbjct: 44 SQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMG-GLLNSR 102
Query: 62 YGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIRKRLQL 121
YG W RR+ F + +E ++ + E+ + ++ +
Sbjct: 103 YGRGWVDHRRLAVNSF---RYFGYGQKSFESKILEETKFFNDAIETYKGRPFDFKQLITN 159
Query: 122 MLYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQS---FEYNYGDFIPLLRPFLRG 178
+ NI ++F +F + ED F SE LA S F YN +I +L PF
Sbjct: 160 AVSNITNLIIFGERF-TYEDTDFQHMIELFSENVELAASASVFLYNAFPWIGIL-PF--- 214
Query: 179 YLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMKGE------IT 232
+ Q R A +F+ + + + N + +D +D +G+ +
Sbjct: 215 ----GKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEMDQGKNDPSSTFS 270
Query: 233 EENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVL--KGNPVTESNL 290
+EN+I+ V + +A ETT + WAI + +P +Q ++++EI ++ G P +
Sbjct: 271 KENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKC 330
Query: 291 HELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAW 340
++PY +A + EVLR +PL + H E+A + G++IPK + ++ N +
Sbjct: 331 -KMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLY 379
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 157/352 (44%), Gaps = 31/352 (8%)
Query: 1 MAQIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDIFTGNGQDMVFT 60
+ Q GPV+RL+LG + +VV++ + + + V+F RP+ + + + QD+
Sbjct: 52 LTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYKLVSQRCQDISLG 111
Query: 61 VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIRKRLQ 120
Y W+ +++ + ++ S M E +D + + + + I+K
Sbjct: 112 DYSLLWKAHKKLTR----SALLLGTRSSM-EPWVDQLTQEFCERMRVQAGAPVTIQKEFS 166
Query: 121 LMLYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYL 180
L+ +I+ + F K ED L + + + D +P LR F L
Sbjct: 167 LLTCSIICYLTFGNK----EDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPNPGL 222
Query: 181 NKCRDLQCRRLAFFNNNFVEK---RRKIMAANGEKHKISCAIDHIIDA-------QMKGE 230
+ + R ++ VEK R K G+ ++ D+++ + G+
Sbjct: 223 WRLKQAIENR-----DHMVEKQLRRHKESMVAGQWRDMT---DYMLQGVGRQRVEEGPGQ 274
Query: 231 ITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIR----REISTVLKGNPVT 286
+ E +V V ++ + ETT ++ WA+A L++HPE+Q++++ RE+ + VT
Sbjct: 275 LLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVT 334
Query: 287 ESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVN 338
+ LP L A + EVLRL +PL +PH + + G+ IP+ ++ N
Sbjct: 335 YKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPN 386
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 159/350 (45%), Gaps = 25/350 (7%)
Query: 2 AQIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDIFTGNGQDMVFTV 61
+Q+YG +F L LG + VV++ D+ + L Q F RP +F T G ++ +
Sbjct: 44 SQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMG-GLLNSR 102
Query: 62 YGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIRKRLQL 121
YG W RR+ F + +E ++ + E+ + ++ +
Sbjct: 103 YGRGWVDHRRLAVNSF---RYFGYGQKSFESKILEETKFFNDAIETYKGRPFDFKQLITN 159
Query: 122 MLYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQS---FEYNYGDFIPLLRPFLRG 178
+ NI ++F +F + ED F SE LA S F YN +I +L PF
Sbjct: 160 AVSNITNLIIFGERF-TYEDTDFQHMIELFSENVELAASASVFLYNAFPWIGIL-PF--- 214
Query: 179 YLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMKGE------IT 232
+ Q R A +F+ + + + N + +D +D +G+ +
Sbjct: 215 ----GKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDEMDQGKNDPSSTFS 270
Query: 233 EENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVL--KGNPVTESNL 290
+EN+I+ V + +A ETT + WAI + +P +Q ++++EI ++ G P +
Sbjct: 271 KENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKC 330
Query: 291 HELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAW 340
++PY +A + EVLR +PL + H E+A + G++IPK + ++ N +
Sbjct: 331 -KMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLY 379
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 188/441 (42%), Gaps = 47/441 (10%)
Query: 5 YGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFD-IFTGNGQDMVFTVYG 63
YG VF + LGS+ +VV+ D + L Q F R + V D IF G G V G
Sbjct: 43 YGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYG---VIFANG 99
Query: 64 EHWRKMRRIMTLPFFTNKVVHNYS-------DMWEQEMDLVVHDLKNDYESVSTKGIVIR 116
E WR +RR F+ + ++ + ++E +V +L+ +KG ++
Sbjct: 100 ERWRALRR------FSLATMRDFGMGKRSVEERIQEEARCLVEELRK------SKGALLD 147
Query: 117 KRLQL--MLYNIMYRMMFDAKFESQEDPLFIE-----ATRFNSERSRLAQSFEYNYGDFI 169
L + NI+ ++F +F+ + DP+F+ F+ S +Q FE G
Sbjct: 148 NTLLFHSITSNIICSIVFGKRFDYK-DPVFLRLLDLFFQSFSLISSFSSQVFELFSG--- 203
Query: 170 PLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHI--IDAQM 227
L+ F + R+LQ + F VEK R + + + I + + +
Sbjct: 204 -FLKYFPGTHRQIYRNLQ--EINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDP 260
Query: 228 KGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGN-PVT 286
E +N+I V ++ A ETT ++ + ++ +P V +++++EI V+ + P
Sbjct: 261 SSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPA 320
Query: 287 ESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLANNP 346
+ ++PY A + E+ RL IP VPH ++ + G+ IPK +++ ++P
Sbjct: 321 LDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDP 380
Query: 347 XXXXXXXXXXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSCXXXXXXXXXXXXXXXK 406
+DA G K + ++PF +G+R C
Sbjct: 381 RYFETPNTFNPGHF------LDA-NGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTT 433
Query: 407 LVTSFEMKAPQGIDKIDVSEK 427
++ +F + +P + ID++ +
Sbjct: 434 ILQNFSIASPVPPEDIDLTPR 454
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 190/440 (43%), Gaps = 37/440 (8%)
Query: 1 MAQIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFD-IFTGNGQDMVF 59
+ + YG VF + LGS+ +VV+ D + L Q F R + V D IF G G V
Sbjct: 39 LREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYG---VI 95
Query: 60 TVYGEHWRKMRR--IMTLPFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIRK 117
GE WR +RR + T+ F + + ++E +V +L+ +KG ++
Sbjct: 96 FANGERWRALRRFSLATMRDF-GMGKRSVEERIQEEARCLVEELRK------SKGALLDN 148
Query: 118 RLQL--MLYNIMYRMMFDAKFESQEDPLFIE-----ATRFNSERSRLAQSFEYNYGDFIP 170
L + NI+ ++F +F+ + DP+F+ F+ S +Q FE G
Sbjct: 149 TLLFHSITSNIICSIVFGKRFDYK-DPVFLRLLDLFFQSFSLISSFSSQVFELFSG---- 203
Query: 171 LLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHI--IDAQMK 228
L+ F + R+LQ + F VEK R + + + I + + +
Sbjct: 204 FLKHFPGTHRQIYRNLQ--EINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPS 261
Query: 229 GEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGN-PVTE 287
E +N+I V ++ A ETT ++ + ++ +P V +++++EI V+ + P
Sbjct: 262 SEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPAL 321
Query: 288 SNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLANNPX 347
+ ++PY A + E+ RL IP VPH ++ + G+ IPK +++ ++P
Sbjct: 322 DDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPR 381
Query: 348 XXXXXXXXXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSCXXXXXXXXXXXXXXXKL 407
+DA G K + ++PF +G+R C +
Sbjct: 382 YFETPNTFNPGHF------LDA-NGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTI 434
Query: 408 VTSFEMKAPQGIDKIDVSEK 427
+ +F + +P + ID++ +
Sbjct: 435 LQNFSIASPVPPEDIDLTPR 454
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 188/441 (42%), Gaps = 47/441 (10%)
Query: 5 YGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFD-IFTGNGQDMVFTVYG 63
YG VF + LGS+ +VV+ D + L Q F R + V D IF G G V G
Sbjct: 43 YGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYG---VIFANG 99
Query: 64 EHWRKMRRIMTLPFFTNKVVHNYS-------DMWEQEMDLVVHDLKNDYESVSTKGIVIR 116
E WR +RR F+ + ++ + ++E +V +L+ +KG ++
Sbjct: 100 ERWRALRR------FSLATMRDFGMGKRSVEERIQEEARCLVEELRK------SKGALLD 147
Query: 117 KRLQL--MLYNIMYRMMFDAKFESQEDPLFIE-----ATRFNSERSRLAQSFEYNYGDFI 169
L + NI+ ++F +F+ + DP+F+ F+ S +Q FE G
Sbjct: 148 NTLLFHSITSNIICSIVFGKRFDYK-DPVFLRLLDLFFQSFSLISSFSSQVFELFSG--- 203
Query: 170 PLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHI--IDAQM 227
L+ F + R+LQ + F VEK R + + + I + + +
Sbjct: 204 -FLKYFPGTHRQIYRNLQ--EINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDP 260
Query: 228 KGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGN-PVT 286
E +N+I V ++ A ETT ++ + ++ +P V +++++EI V+ + P
Sbjct: 261 SSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPA 320
Query: 287 ESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLANNP 346
+ ++PY A + E+ RL IP VPH ++ + G+ IPK +++ ++P
Sbjct: 321 LDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDP 380
Query: 347 XXXXXXXXXXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSCXXXXXXXXXXXXXXXK 406
+DA G K + ++PF +G+R C
Sbjct: 381 RYFETPNTFNPGHF------LDA-NGALKRNEGFMPFSLGKRICAGEGIARTELFLFFTT 433
Query: 407 LVTSFEMKAPQGIDKIDVSEK 427
++ +F + +P + ID++ +
Sbjct: 434 ILQNFSIASPVPPEDIDLTPR 454
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 188/441 (42%), Gaps = 47/441 (10%)
Query: 5 YGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFD-IFTGNGQDMVFTVYG 63
YG VF + LGS+ +VV+ D + L Q F R + V D IF G G V G
Sbjct: 43 YGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYG---VIFANG 99
Query: 64 EHWRKMRRIMTLPFFTNKVVHNYS-------DMWEQEMDLVVHDLKNDYESVSTKGIVIR 116
E WR +RR F+ + ++ + ++E +V +L+ +KG ++
Sbjct: 100 ERWRALRR------FSLATMRDFGMGKRSVEERIQEEARCLVEELRK------SKGALLD 147
Query: 117 KRLQL--MLYNIMYRMMFDAKFESQEDPLFIE-----ATRFNSERSRLAQSFEYNYGDFI 169
L + NI+ ++F +F+ + DP+F+ F+ S +Q FE G
Sbjct: 148 NTLLFHSITSNIICSIVFGKRFDYK-DPVFLRLLDLFFQSFSLISSFSSQVFELFSG--- 203
Query: 170 PLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHI--IDAQM 227
L+ F + R+LQ + F VEK R + + + I + + +
Sbjct: 204 -FLKYFPGTHRQIYRNLQ--EINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDP 260
Query: 228 KGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGN-PVT 286
E +N+I V ++ A ETT ++ + ++ +P V +++++EI V+ + P
Sbjct: 261 SSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPA 320
Query: 287 ESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLANNP 346
+ ++PY A + E+ RL IP VPH ++ + G+ IPK +++ ++P
Sbjct: 321 LDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDP 380
Query: 347 XXXXXXXXXXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSCXXXXXXXXXXXXXXXK 406
+DA G K + ++PF +G+R C
Sbjct: 381 RYFETPNTFNPGHF------LDA-NGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTT 433
Query: 407 LVTSFEMKAPQGIDKIDVSEK 427
++ +F + +P + ID++ +
Sbjct: 434 ILQNFSIASPVPPEDIDLTPR 454
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 190/440 (43%), Gaps = 37/440 (8%)
Query: 1 MAQIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFD-IFTGNGQDMVF 59
+ + YG VF + LGS+ +VV+ D + L Q F R + V D IF G G V
Sbjct: 39 LREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYG---VI 95
Query: 60 TVYGEHWRKMRR--IMTLPFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIRK 117
GE WR +RR + T+ F + + ++E +V +L+ +KG ++
Sbjct: 96 FANGERWRALRRFSLATMRDF-GMGKRSVEERIQEEARCLVEELRK------SKGALLDN 148
Query: 118 RLQL--MLYNIMYRMMFDAKFESQEDPLFIE-----ATRFNSERSRLAQSFEYNYGDFIP 170
L + NI+ ++F +F+ + DP+F+ F+ S +Q FE G
Sbjct: 149 TLLFHSITSNIICSIVFGKRFDYK-DPVFLRLLDLFFQSFSLISSFSSQVFELFSG---- 203
Query: 171 LLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHI--IDAQMK 228
L+ F + R+LQ + F VEK R + + + I + + +
Sbjct: 204 FLKYFPGTHRQIYRNLQ--EINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPS 261
Query: 229 GEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGN-PVTE 287
E +N+I V ++ A ETT ++ + ++ +P V +++++EI V+ + P
Sbjct: 262 SEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPAL 321
Query: 288 SNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLANNPX 347
+ ++PY A + E+ RL IP VPH ++ + G+ IPK +++ ++P
Sbjct: 322 DDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPR 381
Query: 348 XXXXXXXXXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSCXXXXXXXXXXXXXXXKL 407
+DA G K + ++PF +G+R C +
Sbjct: 382 YFETPNTFNPGHF------LDA-NGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTI 434
Query: 408 VTSFEMKAPQGIDKIDVSEK 427
+ +F + +P + ID++ +
Sbjct: 435 LQNFSIASPVPPEDIDLTPR 454
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 159/347 (45%), Gaps = 22/347 (6%)
Query: 1 MAQIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDIFTGNGQDMVFT 60
+++IYGPVF L G + +VV+ ++ + L G EF R + + G +VF+
Sbjct: 40 LSKIYGPVFTLYFGLERMVVLHGYEVVKEALIDLGEEFSGRGHFPLAER-ANRGFGIVFS 98
Query: 61 VYGEHWRKMRR--IMTLPFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIRKR 118
G+ W+++RR +MTL F + D ++E +V +L+ S ++
Sbjct: 99 -NGKRWKEIRRFSLMTLRNF-GMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCA 156
Query: 119 LQLMLYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLRG 178
++ +I+++ FD K D F+ +E R+ + + P + + G
Sbjct: 157 PCNVICSIIFQKRFDYK-----DQQFLNLMEKLNENIRIVSTPWIQICNNFPTIIDYFPG 211
Query: 179 YLNKCRDLQCRRLAFFNNNFVEK---RRKIMAANGEKHKISCAIDHIIDAQM--KGEITE 233
NK + LAF ++ +EK ++ M N + I C + + + + E T
Sbjct: 212 THNKL----LKNLAFMESDILEKVKEHQESMDINNPRDFIDCFLIKMEKEKQNQQSEFTI 267
Query: 234 ENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGN--PVTESNLH 291
EN++ ++ A ETT ++ +A+ L+ HPEV K++ EI V+ N P + H
Sbjct: 268 ENLVITAADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGH 327
Query: 292 ELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVN 338
+PY A V EV R IP +PH + K + IPK + I+ +
Sbjct: 328 -MPYTDAVVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTS 373
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 152/353 (43%), Gaps = 36/353 (10%)
Query: 1 MAQIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDIFT-GNGQDMVF 59
+++YGPVF + G +VV + + L G EF R + + T G G +
Sbjct: 39 FSKVYGPVFTVYFGMNPIVVFHGYEAVKEALIDNGEEFSGRGNSPISQRITKGLG---II 95
Query: 60 TVYGEHWRKMRRIMTLPFFTNKVVHNYS-------DMWEQEMDLVVHDLKNDYESVSTKG 112
+ G+ W+++RR F+ + N+ D ++E +V +L+ S
Sbjct: 96 SSNGKRWKEIRR------FSLTTLRNFGMGKRSIEDRVQEEAHCLVEELRKTKASPCDPT 149
Query: 113 IVIRKRLQLMLYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSFEYNYGDFIPLL 172
+ L N++ ++F +F+ ++ RFN E R+ S + PLL
Sbjct: 150 FI----LGCAPCNVICSVVFQKRFDYKDQNFLTLMKRFN-ENFRILNSPWIQVCNNFPLL 204
Query: 173 RPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAA---NGEKHKISC---AIDHIIDAQ 226
G NK + +A + EK ++ A+ N + I C ++ D Q
Sbjct: 205 IDCFPGTHNKV----LKNVALTRSYIREKVKEHQASLDVNNPRDFIDCFLIKMEQEKDNQ 260
Query: 227 MKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVL--KGNP 284
K E EN++ V ++ VA ETT ++ + + L+ HPEV K++ EI V+ +P
Sbjct: 261 -KSEFNIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSP 319
Query: 285 VTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVV 337
+ H +PY A V E+ R +P VPH + K + IPK + I+
Sbjct: 320 CMQDRSH-MPYTDAVVHEIQRYSDLVPTGVPHAVTTDTKFRNYLIPKGTTIMA 371
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/459 (22%), Positives = 186/459 (40%), Gaps = 40/459 (8%)
Query: 1 MAQIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFD-IFTGNGQDMVF 59
+++ YGPVF + LG + +VV+ D + L Q EF R FD +F G G V
Sbjct: 39 ISERYGPVFTIHLGPRRVVVLCGHDAVKEALVDQAEEFSGRGEQATFDWLFKGYG---VA 95
Query: 60 TVYGEHWRKMRR--IMTLPFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIRK 117
GE +++RR I TL F + ++E ++ L+ + + + +
Sbjct: 96 FSNGERAKQLRRFSIATLRGF-GVGKRGIEERIQEEAGFLIDALRGTHGANIDPTFFLSR 154
Query: 118 RLQLMLYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSFEYN-------YGDFIP 170
+ ++ +I++ FD ED F+ R + SF++ Y F
Sbjct: 155 TVSNVISSIVFGDRFDY-----EDKEFLSLLRM------MLGSFQFTATSTGQLYEMFSS 203
Query: 171 LLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQM--K 228
+++ ++LQ L F VE ++ + N + I + + + +
Sbjct: 204 VMKHLPGPQQQAFKELQG--LEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPN 261
Query: 229 GEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGN--PVT 286
E +N++ N+ A ET ++ + L+ HPEV+ K+ EI V+ N P
Sbjct: 262 TEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKF 321
Query: 287 ESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLANNP 346
E ++PY +A + E+ R +P+ + H ++ K F +PK +++ + +P
Sbjct: 322 EDRA-KMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDP 380
Query: 347 XXXXXXXXXXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSCXXXXXXXXXXXXXXXK 406
+D K D ++PF +G+R C
Sbjct: 381 RFFSNPRDFNPQHF------LDKKGQFKKSD-AFVPFSIGKRYCFGEGLARMELFLFFTT 433
Query: 407 LVTSFEMKAPQGIDKIDVSEKGGQFSLHIANHSTVVFDP 445
++ +F K+PQ IDVS K F+ I + T+ F P
Sbjct: 434 IMQNFRFKSPQSPKDIDVSPKHVGFAT-IPRNYTMSFLP 471
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 182/440 (41%), Gaps = 40/440 (9%)
Query: 1 MAQIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDIF--TGNGQDMV 58
++++YGPVF L G K +VV+ + + L G EF R +F + G +V
Sbjct: 38 LSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRG---IFPLAERANRGFGIV 94
Query: 59 FTVYGEHWRKMRR--IMTLPFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIR 116
F+ G+ W+++RR +MTL F + D ++E +V +L+ S +
Sbjct: 95 FS-NGKKWKEIRRFSLMTLRNF-GMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFI-- 150
Query: 117 KRLQLMLYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFL 176
L N++ ++F +F+ ++ + N L+ + Y +F P L +
Sbjct: 151 --LGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIEILSSPWIQVYNNF-PALLDYF 207
Query: 177 RGYLNKCRDLQCRRLAFFNNNFVEK---RRKIMAANGEKHKISCAIDHIIDAQMKGEITE 233
G NK + +AF + +EK ++ M N + I C + + + K
Sbjct: 208 PGTHNKL----LKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKM--EKEKHNQPS 261
Query: 234 ENVIYIVENINV----AAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGN--PVTE 287
E I +EN V A ETT ++ +A+ L+ HPEV K++ EI V+ N P +
Sbjct: 262 EFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQ 321
Query: 288 SNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLANNPX 347
H +PY A V EV R +P +PH + K + IPK + I+++ + ++
Sbjct: 322 DRSH-MPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNK 380
Query: 348 XXXXXXXXXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSCXXXXXXXXXXXXXXXKL 407
G K ++PF G+R C +
Sbjct: 381 EFPNPEMFDPHHFLDE-------GGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSI 433
Query: 408 VTSFEMKA---PQGIDKIDV 424
+ +F +K+ P+ +D V
Sbjct: 434 LQNFNLKSLVDPKNLDTTPV 453
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/431 (20%), Positives = 180/431 (41%), Gaps = 31/431 (7%)
Query: 5 YGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFD-IFTGNGQDMVFTVYG 63
YG VF + LG + +V++ + + L + F R + + D F G G V G
Sbjct: 43 YGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYG---VIFANG 99
Query: 64 EHWRKMRR--IMTLPFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIRKRL-- 119
W+ +RR + T+ F + + ++E ++ +L+ +KG ++
Sbjct: 100 NRWKVLRRFSVTTMRDF-GMGKRSVEERIQEEAQCLIEELRK------SKGALMDPTFLF 152
Query: 120 QLMLYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGY 179
Q + NI+ ++F +F Q+ F S ++ F + F L+ F +
Sbjct: 153 QSITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFELFSGFLKHFPGAH 212
Query: 180 LNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIID--AQMKGEITEENVI 237
++LQ + + + VEK R+ + + + I + H+ + E + +N+
Sbjct: 213 RQVYKNLQ--EINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKEKSNAHSEFSHQNLN 270
Query: 238 YIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTESNLHE---LP 294
++ A ETT ++ + ++ +P V +++ REI V+ P LH+ +P
Sbjct: 271 LNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVI--GPHRPPELHDRAKMP 328
Query: 295 YLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLANNPXXXXXXXX 354
Y +A + E+ R +P+ VPH+ + G+ IPK++++ + ++P
Sbjct: 329 YTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDA 388
Query: 355 XXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSCXXXXXXXXXXXXXXXKLVTSFEMK 414
+DA K + ++PF +G+R C ++ +F M
Sbjct: 389 FNPDHF------LDANGALKKTE-AFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMA 441
Query: 415 APQGIDKIDVS 425
+P + ID++
Sbjct: 442 SPVAPEDIDLT 452
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 170/398 (42%), Gaps = 35/398 (8%)
Query: 5 YGPVFRLKLGSKNLVVVSEPDLATQVL--HTQGVEFGSRPRNVVFDIFTGNGQDMVFTVY 62
YG V+ G + ++ +++PD+ VL V RP V G + +
Sbjct: 47 YGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPV-----GFMKSAISIAE 101
Query: 63 GEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIRKRLQLM 122
E W+++R +++ P FT+ + + Q D++V +L+ + E+ K + ++
Sbjct: 102 DEEWKRLRSLLS-PTFTSGKLKEMVPIIAQYGDVLVRNLRREAET--GKPVTLKDVFGAY 158
Query: 123 LYNIMYRMMFDAKFESQEDPL--FIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYL 180
+++ F +S +P F+E T+ R F + F P L P L L
Sbjct: 159 SMDVITSTSFGVNIDSLNNPQDPFVENTK-KLLRFDFLDPFFLSITVF-PFLIPILE-VL 215
Query: 181 NKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMKGEITEENVIYIV 240
N C + R + F V++ ++ + +KH++ + +ID+Q E + +
Sbjct: 216 NIC--VFPREVTNFLRKSVKRMKESRLEDTQKHRVD-FLQLMIDSQNSKETESHKALSDL 272
Query: 241 ENIN------VAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGN-PVTESNLHEL 293
E + A ETT + + + EL HP+VQQK++ EI VL P T + ++
Sbjct: 273 ELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQM 332
Query: 294 PYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLANNPXX-XXXX 352
YL V E LRL PI + + + ++ ++ G IPK +++ ++ L +P
Sbjct: 333 EYLDMVVNETLRLF-PIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPE 391
Query: 353 XXXXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSC 390
NID + Y PFG G R+C
Sbjct: 392 KFLPERFSKKNKDNIDP--------YIYTPFGSGPRNC 421
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 170/398 (42%), Gaps = 35/398 (8%)
Query: 5 YGPVFRLKLGSKNLVVVSEPDLATQVL--HTQGVEFGSRPRNVVFDIFTGNGQDMVFTVY 62
YG V+ G + ++ +++PD+ VL V RP V G + +
Sbjct: 46 YGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPV-----GFMKSAISIAE 100
Query: 63 GEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIRKRLQLM 122
E W+++R +++ P FT+ + + Q D++V +L+ + E+ K + ++
Sbjct: 101 DEEWKRLRSLLS-PTFTSGKLKEMVPIIAQYGDVLVRNLRREAET--GKPVTLKDVFGAY 157
Query: 123 LYNIMYRMMFDAKFESQEDPL--FIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYL 180
+++ F +S +P F+E T+ R F + F P L P L L
Sbjct: 158 SMDVITSTSFGVNIDSLNNPQDPFVENTK-KLLRFDFLDPFFLSITVF-PFLIPILE-VL 214
Query: 181 NKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMKGEITEENVIYIV 240
N C + R + F V++ ++ + +KH++ + +ID+Q E + +
Sbjct: 215 NIC--VFPREVTNFLRKSVKRMKESRLEDTQKHRVD-FLQLMIDSQNSKETESHKALSDL 271
Query: 241 ENIN------VAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGN-PVTESNLHEL 293
E + A ETT + + + EL HP+VQQK++ EI VL P T + ++
Sbjct: 272 ELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQM 331
Query: 294 PYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLANNPXX-XXXX 352
YL V E LRL PI + + + ++ ++ G IPK +++ ++ L +P
Sbjct: 332 EYLDMVVNETLRLF-PIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPE 390
Query: 353 XXXXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSC 390
NID + Y PFG G R+C
Sbjct: 391 KFLPERFSKKNKDNIDP--------YIYTPFGSGPRNC 420
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 170/398 (42%), Gaps = 35/398 (8%)
Query: 5 YGPVFRLKLGSKNLVVVSEPDLATQVL--HTQGVEFGSRPRNVVFDIFTGNGQDMVFTVY 62
YG V+ G + ++ +++PD+ VL V RP V G + +
Sbjct: 48 YGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPV-----GFMKSAISIAE 102
Query: 63 GEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIRKRLQLM 122
E W+++R +++ P FT+ + + Q D++V +L+ + E+ K + ++
Sbjct: 103 DEEWKRLRSLLS-PTFTSGKLKEMVPIIAQYGDVLVRNLRREAET--GKPVTLKDVFGAY 159
Query: 123 LYNIMYRMMFDAKFESQEDPL--FIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYL 180
+++ F +S +P F+E T+ R F + F P L P L L
Sbjct: 160 SMDVITSTSFGVNIDSLNNPQDPFVENTK-KLLRFDFLDPFFLSITVF-PFLIPILE-VL 216
Query: 181 NKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMKGEITEENVIYIV 240
N C + R + F V++ ++ + +KH++ + +ID+Q E + +
Sbjct: 217 NIC--VFPREVTNFLRKSVKRMKESRLEDTQKHRVD-FLQLMIDSQNSKETESHKALSDL 273
Query: 241 ENIN------VAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGN-PVTESNLHEL 293
E + A ETT + + + EL HP+VQQK++ EI VL P T + ++
Sbjct: 274 ELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQM 333
Query: 294 PYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLANNPXX-XXXX 352
YL V E LRL PI + + + ++ ++ G IPK +++ ++ L +P
Sbjct: 334 EYLDMVVNETLRLF-PIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPE 392
Query: 353 XXXXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSC 390
NID + Y PFG G R+C
Sbjct: 393 KFLPERFSKKNKDNIDP--------YIYTPFGSGPRNC 422
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 182/440 (41%), Gaps = 40/440 (9%)
Query: 1 MAQIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDIF--TGNGQDMV 58
++++YGPVF L G K +VV+ + + L G EF R +F + G +V
Sbjct: 40 LSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRG---IFPLAERANRGFGIV 96
Query: 59 FTVYGEHWRKMRR--IMTLPFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIR 116
F+ G+ W+++RR +MTL F + D ++E +V +L+ S +
Sbjct: 97 FS-NGKKWKEIRRFSLMTLRNF-GMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFI-- 152
Query: 117 KRLQLMLYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFL 176
L N++ ++F +F+ ++ + N L+ + +F P++ +
Sbjct: 153 --LGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIID-YF 209
Query: 177 RGYLNKCRDLQCRRLAFFNNNFVEK---RRKIMAANGEKHKISCAIDHIIDAQMKGEITE 233
G NK + +AF + +EK ++ M N + I C + + + K
Sbjct: 210 PGTHNKL----LKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKM--EKEKHNQPS 263
Query: 234 ENVIYIVENINV----AAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGN--PVTE 287
E I +EN V A ETT ++ +A+ L+ HPEV K++ EI V+ N P +
Sbjct: 264 EFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQ 323
Query: 288 SNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLANNPX 347
H +PY A V EV R +P +PH + K + IPK + I+++ + ++
Sbjct: 324 DRSH-MPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNK 382
Query: 348 XXXXXXXXXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSCXXXXXXXXXXXXXXXKL 407
G K ++PF G+R C +
Sbjct: 383 EFPNPEMFDPHHFLDE-------GGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSI 435
Query: 408 VTSFEMKA---PQGIDKIDV 424
+ +F +K+ P+ +D V
Sbjct: 436 LQNFNLKSLVDPKNLDTTPV 455
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 159/422 (37%), Gaps = 23/422 (5%)
Query: 5 YGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDI--FTGNGQDMVFTVY 62
+G VF L+L +VV++ + L T G + RP + I F Q + Y
Sbjct: 43 FGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVFLARY 102
Query: 63 GEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIRKRLQLM 122
G WR+ RR + + W E L + + S + L
Sbjct: 103 GPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAAC---LCAAFANHSGRPFRPNGLLDKA 159
Query: 123 LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLR--PFLRGYL 180
+ N++ + +FE +DP F+ E + F + +P+L P L G
Sbjct: 160 VSNVIASLTCGRRFE-YDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIPALAG-- 216
Query: 181 NKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMKGE--ITEENVIY 238
K Q L + E R A + + + A+ E +EN+
Sbjct: 217 -KVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRI 275
Query: 239 IVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKG--NPVTESNLHELPYL 296
+V ++ A + TT ++ W + ++ HP+VQ+++++EI V+ P H +PY
Sbjct: 276 VVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAH-MPYT 334
Query: 297 QAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLANNPXXXXXXXXXX 356
A + EV R +PL V HM + ++ GF IPK + ++ N + +
Sbjct: 335 TAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFH 394
Query: 357 XXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSCXXXXXXXXXXXXXXXKLVTSFEMKAP 416
+DA K + +LPF GRR+C L+ F P
Sbjct: 395 PEHF------LDAQGHFVKPE-AFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVP 447
Query: 417 QG 418
G
Sbjct: 448 TG 449
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 184/455 (40%), Gaps = 32/455 (7%)
Query: 1 MAQIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFD-IFTGNGQDMVF 59
+++ YGPVF + LG + +VV+ D + L Q EF R FD +F G G +VF
Sbjct: 39 ISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGYG--VVF 96
Query: 60 TVYGEHWRKMRR--IMTL-PFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIR 116
+ GE +++RR I TL F K + ++E ++ L+ + +
Sbjct: 97 S-NGERAKQLRRFSIATLRDFGVGK--RGIEERIQEEAGFLIDALRGTGGANIDPTFFLS 153
Query: 117 KRLQLMLYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFL 176
+ + ++ +I++ FD K + L + F + Q +E L P
Sbjct: 154 RTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGSFQFTSTSTGQLYEMFSSVMKHLPGPQQ 213
Query: 177 RGY--LNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMK--GEIT 232
+ + L D ++ VE ++ + N + I + + + + E
Sbjct: 214 QAFQLLQGLEDFIAKK--------VEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFY 265
Query: 233 EENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGN--PVTESNL 290
+N++ N+ A ET ++ + L+ HPEV+ K+ EI V+ N P E
Sbjct: 266 LKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA 325
Query: 291 HELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLANNPXXXX 350
++PY++A + E+ R IP+ + ++ K F +PK +++ + +P
Sbjct: 326 -KMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFS 384
Query: 351 XXXXXXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSCXXXXXXXXXXXXXXXKLVTS 410
G K ++PF +G+R+C ++ +
Sbjct: 385 NPQDFNPQHFLNE-------KGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQN 437
Query: 411 FEMKAPQGIDKIDVSEKGGQFSLHIANHSTVVFDP 445
F +K+ Q IDVS K F+ I + T+ F P
Sbjct: 438 FRLKSSQSPKDIDVSPKHVGFAT-IPRNYTMSFLP 471
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 100/460 (21%), Positives = 185/460 (40%), Gaps = 42/460 (9%)
Query: 1 MAQIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFD-IFTGNGQDMVF 59
+++ YGPVF + LG + +VV+ D + L Q EF R FD +F G G +VF
Sbjct: 39 ISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGYG--VVF 96
Query: 60 TVYGEHWRKMRR--IMTL-PFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIR 116
+ GE +++RR I TL F K + ++E ++ L+ + +
Sbjct: 97 S-NGERAKQLRRFSIATLRDFGVGK--RGIEERIQEEAGFLIDALRGTGGANIDPTFFLS 153
Query: 117 KRLQLMLYNIMYRMMFDAKFESQEDPLFIEATR-----FNSERSRLAQSFEYNYGDFIPL 171
+ + ++ +I++ FD K D F+ R F + Q +E L
Sbjct: 154 RTVSNVISSIVFGDRFDYK-----DKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHL 208
Query: 172 LRPFLRGY--LNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMK- 228
P + + L D ++ VE ++ + N + I + + + +
Sbjct: 209 PGPQQQAFQLLQGLEDFIAKK--------VEHNQRTLDPNSPRDFIDSFLIRMQEEEKNP 260
Query: 229 -GEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGN--PV 285
E +N++ N+ + ET ++ + L+ HPEV+ K+ EI V+ N P
Sbjct: 261 NTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK 320
Query: 286 TESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLANN 345
E ++PY++A + E+ R IP+ + ++ K F +PK +++ + +
Sbjct: 321 FEDRA-KMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRD 379
Query: 346 PXXXXXXXXXXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSCXXXXXXXXXXXXXXX 405
P G K ++PF +G+R+C
Sbjct: 380 PSFFSNPQDFNPQHFLNE-------KGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFT 432
Query: 406 KLVTSFEMKAPQGIDKIDVSEKGGQFSLHIANHSTVVFDP 445
++ +F +K+ Q IDVS K F+ I + T+ F P
Sbjct: 433 TVMQNFRLKSSQSPKDIDVSPKHVGFAT-IPRNYTMSFLP 471
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 101/459 (22%), Positives = 185/459 (40%), Gaps = 40/459 (8%)
Query: 1 MAQIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFD-IFTGNGQDMVF 59
+++ YGPVF + LG + +VV+ D + L Q EF R FD +F G G +VF
Sbjct: 39 ISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGYG--VVF 96
Query: 60 TVYGEHWRKMRR--IMTL-PFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIR 116
+ GE +++RR I TL F K + ++E ++ L+ + +
Sbjct: 97 S-NGERAKQLRRFSIATLRDFGVGK--RGIEERIQEEAGFLIDALRGTGGANIDPTFFLS 153
Query: 117 KRLQLMLYNIMYRMMFDAKFESQEDPLFIEATR-----FNSERSRLAQSFEYNYGDFIPL 171
+ + ++ +I++ FD K D F+ R F + Q +E L
Sbjct: 154 RTVSNVISSIVFGDRFDYK-----DKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHL 208
Query: 172 LRPFLRGYLNKCRDLQC-RRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMK-- 228
P + + QC + L F VE ++ + N + I + + + +
Sbjct: 209 PGP-------QQQAFQCLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPN 261
Query: 229 GEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGN--PVT 286
E +N++ + + ET ++ + L+ HPEV+ K+ EI V+ N P
Sbjct: 262 TEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKF 321
Query: 287 ESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLANNP 346
E ++PY++A + E+ R IP+ + ++ K F +PK +++ + +P
Sbjct: 322 EDRA-KMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDP 380
Query: 347 XXXXXXXXXXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSCXXXXXXXXXXXXXXXK 406
G K ++PF +G+R+C
Sbjct: 381 SFFSNPQDFNPQHFLNE-------KGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTT 433
Query: 407 LVTSFEMKAPQGIDKIDVSEKGGQFSLHIANHSTVVFDP 445
++ +F +K+ Q IDVS K F+ I + T+ F P
Sbjct: 434 VMQNFRLKSSQSPKDIDVSPKHVGFAT-IPRNYTMSFLP 471
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 159/422 (37%), Gaps = 23/422 (5%)
Query: 5 YGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDI--FTGNGQDMVFTVY 62
+G VF L+L +VV++ + L T G + RP + I F Q + Y
Sbjct: 43 FGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVFLARY 102
Query: 63 GEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIRKRLQLM 122
G WR+ RR + + W E L + + S + L
Sbjct: 103 GPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAAC---LCAAFANHSGRPFRPNGLLDKA 159
Query: 123 LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLR--PFLRGYL 180
+ N++ + +FE +DP F+ E + F + +P+ R P L G
Sbjct: 160 VSNVIASLTCGRRFE-YDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVDRHIPALAG-- 216
Query: 181 NKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMKGE--ITEENVIY 238
K Q L + E R A + + + A+ E +EN+
Sbjct: 217 -KVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRI 275
Query: 239 IVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKG--NPVTESNLHELPYL 296
+V ++ A + TT ++ W + ++ HP+VQ+++++EI V+ P H +PY
Sbjct: 276 VVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAH-MPYT 334
Query: 297 QAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLANNPXXXXXXXXXX 356
A + EV R +PL + HM + ++ GF IPK + ++ N + +
Sbjct: 335 TAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFH 394
Query: 357 XXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSCXXXXXXXXXXXXXXXKLVTSFEMKAP 416
+DA K + +LPF GRR+C L+ F P
Sbjct: 395 PEHF------LDAQGHFVKPE-AFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVP 447
Query: 417 QG 418
G
Sbjct: 448 TG 449
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/460 (21%), Positives = 184/460 (40%), Gaps = 42/460 (9%)
Query: 1 MAQIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFD-IFTGNGQDMVF 59
+++ YGPVF + LG + +VV+ D + L Q EF R FD +F G G +VF
Sbjct: 39 ISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGYG--VVF 96
Query: 60 TVYGEHWRKMRR--IMTL-PFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIR 116
+ GE +++RR I TL F K + ++E ++ L+ + +
Sbjct: 97 S-NGERAKQLRRFSIATLRDFGVGK--RGIEERIQEEAGFLIDALRGTGGANIDPTFFLS 153
Query: 117 KRLQLMLYNIMYRMMFDAKFESQEDPLFIEATR-----FNSERSRLAQSFEYNYGDFIPL 171
+ + ++ +I++ FD K D F+ R F + Q +E L
Sbjct: 154 RTVSNVISSIVFGDRFDYK-----DKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHL 208
Query: 172 LRPFLRGY--LNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMK- 228
P + + L D ++ VE ++ + N + I + + + +
Sbjct: 209 PGPQQQAFQLLQGLEDFIAKK--------VEHNQRTLDPNSPRDFIDSFLIRMQEEEKNP 260
Query: 229 -GEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGN--PV 285
E +N++ + V ET ++ + L+ HPEV+ K+ EI V+ N P
Sbjct: 261 NTEFYLKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK 320
Query: 286 TESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLANN 345
E ++PY++A + E+ R IP+ + ++ K F +PK +++ + +
Sbjct: 321 FEDRA-KMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRD 379
Query: 346 PXXXXXXXXXXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSCXXXXXXXXXXXXXXX 405
P G K ++PF +G+R+C
Sbjct: 380 PSFFSNPQDFNPQHFLNE-------KGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFT 432
Query: 406 KLVTSFEMKAPQGIDKIDVSEKGGQFSLHIANHSTVVFDP 445
++ +F +K+ Q IDVS K F+ I + T+ F P
Sbjct: 433 TVMQNFRLKSSQSPKDIDVSPKHVGFAT-IPRNYTMSFLP 471
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 164/396 (41%), Gaps = 26/396 (6%)
Query: 1 MAQIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDIFTGNGQDMVFT 60
++ YGPVF + LG K VV+ + + L G EF R + + + G + F+
Sbjct: 39 FSECYGPVFTVYLGMKPTVVLHGYEAVKEALVDLGEEFAGRGSVPILEKVS-KGLGIAFS 97
Query: 61 VYGEHWRKMRR--IMTLPFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIRKR 118
+ W++MRR +MTL F + D ++E +V +L+ S +
Sbjct: 98 -NAKTWKEMRRFSLMTLRNF-GMGKRSIEDRIQEEARCLVEELRKTNASPCDPTFI---- 151
Query: 119 LQLMLYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLRG 178
L N++ ++F +F+ +++ + L + Y +F P L
Sbjct: 152 LGCAPCNVICSVIFHNRFDYKDEEFLKLMESLHENVELLGTPWLQVYNNF-----PALLD 206
Query: 179 YLNKCRDLQCRRLAFFNNNFVEK---RRKIMAANGEKHKISCAIDHIIDAQMKGEITEEN 235
Y + + N +EK +K++ N + I C + + + + E T E+
Sbjct: 207 YFPGIHKTLLKNADYIKNFIMEKVKEHQKLLDVNNPRDFIDCFLIKM-EQENNLEFTLES 265
Query: 236 VIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVL-KGNPVTESNLHELP 294
++ V ++ A ETT ++ +++ L+ HPEV +++ EI V+ + + +P
Sbjct: 266 LVIAVSDLFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMP 325
Query: 295 YLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLANNPXXXXXXXX 354
Y A + E+ R +P +PH + + + IPK + I+ + + ++
Sbjct: 326 YTDAVIHEIQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKV 385
Query: 355 XXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSC 390
+D K D+ ++PF G+R C
Sbjct: 386 FDPGHF------LDESGNFKKSDY-FMPFSAGKRMC 414
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/460 (21%), Positives = 184/460 (40%), Gaps = 42/460 (9%)
Query: 1 MAQIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFD-IFTGNGQDMVF 59
+++ YGPVF + LG + +VV+ D + L Q EF R FD +F G G +VF
Sbjct: 39 ISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGYG--VVF 96
Query: 60 TVYGEHWRKMRR--IMTL-PFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIR 116
+ GE +++RR I TL F K + ++E ++ L+ + +
Sbjct: 97 S-NGERAKQLRRFSIATLRDFGVGK--RGIEERIQEEAGFLIDALRGTGGANIDPTFFLS 153
Query: 117 KRLQLMLYNIMYRMMFDAKFESQEDPLFIEATR-----FNSERSRLAQSFEYNYGDFIPL 171
+ + ++ +I++ FD K D F+ R F + Q +E L
Sbjct: 154 RTVSNVISSIVFGDRFDYK-----DKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHL 208
Query: 172 LRPFLRGY--LNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMK- 228
P + + L D ++ VE ++ + N + I + + + +
Sbjct: 209 PGPQQQAFQLLQGLEDFIAKK--------VEHNQRTLDPNSPRDFIDSFLIRMQEEEKNP 260
Query: 229 -GEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGN--PV 285
E +N++ + + ET ++ + L+ HPEV+ K+ EI V+ N P
Sbjct: 261 NTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPK 320
Query: 286 TESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLANN 345
E ++PY++A + E+ R IP+ + ++ K F +PK +++ + +
Sbjct: 321 FEDRA-KMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRD 379
Query: 346 PXXXXXXXXXXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSCXXXXXXXXXXXXXXX 405
P G K ++PF +G+R+C
Sbjct: 380 PSFFSNPQDFNPQHFLNE-------KGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFT 432
Query: 406 KLVTSFEMKAPQGIDKIDVSEKGGQFSLHIANHSTVVFDP 445
++ +F +K+ Q IDVS K F+ I + T+ F P
Sbjct: 433 TVMQNFRLKSSQSPKDIDVSPKHVGFAT-IPRNYTMSFLP 471
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 178/405 (43%), Gaps = 54/405 (13%)
Query: 5 YGPVFRLKLGSKNLVVVSEPDLA-----TQVLHTQGVEFGSRP-------RNVVFDIFTG 52
YG +FR+KLGS + V + P L T+ H Q +E +P RN + +
Sbjct: 61 YGQIFRMKLGSFDSVHLGSPSLLEALYRTESAHPQRLEI--KPWKAYRDHRNEAYGLMIL 118
Query: 53 NGQDM--VFTVYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLV--VHDLKNDYESV 108
GQ+ V + + + K IM L N+V+ ++ + ++ D + DL ++
Sbjct: 119 EGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNKW 178
Query: 109 STKGIVIRKRLQLMLYNIMYRMMFDAKFESQEDPL-FIEATRFNSERSRLAQSFEYNYGD 167
S + I L+LY + ++ + E++E+ L FI A + + +G
Sbjct: 179 SFESIC------LVLYEKRFGLL---QKETEEEALTFITAIK----------TMMSTFGK 219
Query: 168 FIPLLRPF-LRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQ 226
++ P L LN + Q LA+ + + + + +++ D + D
Sbjct: 220 M--MVTPVELHKRLN-TKVWQAHTLAW--DTIFKSVKPCIDNRLQRYSQQPGADFLCDIY 274
Query: 227 MKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGNPVT 286
+ ++++ + V + +AA+ETT S+ W + L +P+ Q+++ +E+ +VL N
Sbjct: 275 QQDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTP 334
Query: 287 ES-NLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLANN 345
+ +L +PYL+A +KE +RL +P ++ + LG + +PK + + +N L ++
Sbjct: 335 RAEDLRNMPYLKACLKESMRLTPSVPFTTRTLD-KPTVLGEYALPKGTVLTLNTQVLGSS 393
Query: 346 PXXXXXXXXXXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSC 390
I+ F +LPFG+G+R C
Sbjct: 394 EDNFEDSHKFRPERWLQKEKKINP--------FAHLPFGIGKRMC 430
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 173/427 (40%), Gaps = 39/427 (9%)
Query: 2 AQIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDIFTGN--GQDMVF 59
A+ YGPV R+ + K V+V+ P+ + L + S+ + +F GQ +V
Sbjct: 20 AKKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVS 79
Query: 60 TVYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLV-VHDLKNDYES-VSTKGIVIRK 117
E W K RR++ L F + +V E+ LV + + K D ++ VS + ++
Sbjct: 80 ECNYERWHKQRRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYT 139
Query: 118 RLQLM---LYNIMYRMMFDA-KFESQEDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLR 173
+ ++ + + M+ A K SQ L +E + R+ LA+ F+P R
Sbjct: 140 AMDILAKAAFGMETSMLLGAQKPLSQAVKLMLEG--ITASRNTLAK--------FLPGKR 189
Query: 174 PFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMKGEITE 233
LR R L+ ++V++RR+ + GE+ + I+ A+ +G +
Sbjct: 190 KQLREVRESIRFLRQ-----VGRDWVQRRREAL-KRGEEVPADI-LTQILKAE-EGAQDD 241
Query: 234 ENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTE-SNLHE 292
E ++ +A ET+ + + + EL PE+ +++ E+ V+ + +L
Sbjct: 242 EGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGR 301
Query: 293 LPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLANNPXXXXXX 352
L YL +KE LRL+ P + EE + G +P + ++ + + +
Sbjct: 302 LQYLSQVLKESLRLYPPAWGTFRLLE-EETLIDGVRVPGNTPLLFSTYVMGR-------- 352
Query: 353 XXXXXXXXXXXXCNIDAVA-GGGKVDFRYLPFGVGRRSCXXXXXXXXXXXXXXXKLVTSF 411
N D G K F Y PF +G RSC KL+
Sbjct: 353 --MDTYFEDPLTFNPDRFGPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRL 410
Query: 412 EMKAPQG 418
E + G
Sbjct: 411 EFRLVPG 417
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 144/346 (41%), Gaps = 25/346 (7%)
Query: 1 MAQIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDIFTGNGQDMVFT 60
+AQ +GPVF L +GS+ +VV+ + L EF R F G ++F
Sbjct: 39 LAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAFHAHRDRG--IIFN 96
Query: 61 VYGEHWRKMRRIMTLPFFTNKVVHNYS-------DMWEQEMDLVVHDLKNDYESVSTKGI 113
G W+ +RR F+ + NY ++E ++ L+
Sbjct: 97 -NGPTWKDIRR------FSLTTLRNYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTF 149
Query: 114 VIRKRLQLMLYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLR 173
+I ++ +I++R FD E +++ FN L+ + Y +F L
Sbjct: 150 LIGCAPCNVIADILFRKHFDYNDEKFLRLMYL----FNENFHLLSTPWLQLYNNFPSFLH 205
Query: 174 PFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMKGE--I 231
+L G K + + + V++ + + N + C + + + E
Sbjct: 206 -YLPGSHRKVIK-NVAEVKEYVSERVKEHHQSLDPNCPRDLTDCLLVEMEKEKHSAERLY 263
Query: 232 TEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTE-SNL 290
T + + V ++ A ETT ++ + + L+ +PE+++K+ EI V+ + + +
Sbjct: 264 TMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDR 323
Query: 291 HELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIV 336
E+PY+ A V E+ R T +P +PH + G+ IPK + +V
Sbjct: 324 QEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVV 369
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 147/358 (41%), Gaps = 44/358 (12%)
Query: 1 MAQI--YGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDIFTGN-GQDM 57
M+Q+ +G V R+KLG K + V+ P+L + +++ G G++
Sbjct: 48 MSQLRDHGDVVRIKLGPKTVYAVTNPELTGALALNPDYHIA----GPLWESLEGLLGKEG 103
Query: 58 VFTVYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLKNDYE---SVSTKGIV 114
V T G R+ RR + P F + Y + E+E H L ++ +V
Sbjct: 104 VATANGPLHRRQRRTIQ-PAFRLDAIPAYGPIMEEE----AHALTERWQPGKTVDATSES 158
Query: 115 IRKRLQLMLYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRP 174
R +++ ++ D E E AT F R+ Y +PL P
Sbjct: 159 FRVAVRVAARCLLRGQYMD---ERAERLCVALATVFRGMYRRMVVPLGPLY--RLPL--P 211
Query: 175 FLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMKGE---- 230
R + + DL + + +RR A+G+K D ++ A ++ +
Sbjct: 212 ANRRFNDALADLH-----LLVDEIIAERR----ASGQKP------DDLLTALLEAKDDNG 256
Query: 231 --ITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTES 288
I E+ + V I ET ++ W + L +HPE +IR E+ V G PV
Sbjct: 257 DPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGRPVAFE 316
Query: 289 NLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLANNP 346
++ +L + + E +RL + +L + E++LGG+ IP + I+ + + + +P
Sbjct: 317 DVRKLRHTGNVIVEAMRLRPAVWVLT-RRAVAESELGGYRIPAGADIIYSPYAIQRDP 373
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 85/407 (20%), Positives = 162/407 (39%), Gaps = 48/407 (11%)
Query: 3 QIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDIFTGNGQDM----- 57
Q GP+FR LG +V V P+ ++ + P ++ + + Q
Sbjct: 47 QELGPIFRYNLGGPRMVCVMLPEDVEKLQQVDSLH----PCRMILEPWVAYRQHRGHKCG 102
Query: 58 VFTVYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIRK 117
VF + G WR R + + K V + M V + D+ K ++
Sbjct: 103 VFLLNGPEWRFNRLRLNPDVLSPKAVQRFLPM--------VDAVARDFSQALKKKVLQNA 154
Query: 118 RLQLMLYNIMYRMMFDAKFESQEDPLFIEATRF-----NSERSRLAQSFEYNYGDFIPLL 172
R L L + +F E+ LF E +S + E + + L+
Sbjct: 155 RGSLTL--DVQPSIFHYTIEASNLALFGERLGLVGHSPSSASLNFLHALEVMFKSTVQLM 212
Query: 173 RPFLRGYLNKCRDLQCRRLAF--------FNNNFVEKRRKIMAANGEKHKISCAIDHIID 224
F+ L++ + + F + +N ++K + +A N +H + ++
Sbjct: 213 --FMPRSLSRWISPKVWKEHFEAWDCIFQYGDNCIQKIYQELAFNRPQHYTGIVAELLLK 270
Query: 225 AQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRRE-ISTVLKGN 283
A++ E + N + + +++TT + + + EL +P+VQQ +R+E ++ +
Sbjct: 271 AELSLEAIKANSM----ELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASIS 326
Query: 284 PVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLA 343
+ ELP L+AA+KE LRL+ P+ L + + + L + IP + + V + L
Sbjct: 327 EHPQKATTELPLLRAALKETLRLY-PVGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLG 385
Query: 344 NNPXXXXXXXXXXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSC 390
N +D + G G+ +F ++PFG G R C
Sbjct: 386 RNAALFPRPERYNPQRW------LD-IRGSGR-NFHHVPFGFGMRQC 424
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 108/250 (43%), Gaps = 20/250 (8%)
Query: 200 EKRRKIMAANGEKHKISCAIDHIIDAQMKGEITEENVIYIVENINVAAIETTLWSMEWAI 259
EKRR+I + + A + I+ A+ +G++T ENV + + +AA +T S+ + +
Sbjct: 261 EKRRRISTEEKLEECMDFATELIL-AEKRGDLTRENVNQCILEMLIAAPDTMSVSLFFML 319
Query: 260 AELVNHPEVQQKIRREISTVLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNL 319
+ HP V++ I +EI TV+ + ++ +L ++ + E +R + P+ LV L
Sbjct: 320 FLIAKHPNVEEAIIKEIQTVIGERDIKIDDIQKLKVMENFIYESMR-YQPVVDLVMRKAL 378
Query: 320 EEAKLGGFTIPKESKIVVNAWWLANNPXXXXXXXXXXXXXXXXXXCNIDAVAGGGKVDFR 379
E+ + G+ + K + I++N + ++ A V +R
Sbjct: 379 EDDVIDGYPVKKGTNIILNIGRMHR-----------LEFFPKPNEFTLENFAKN--VPYR 425
Query: 380 YL-PFGVGRRSCXXXXXXXXXXXXXXXKLVTSFEMKAPQGIDKIDVSEKGGQFSLH---I 435
Y PFG G R C L+ F +K QG ++ +K SLH
Sbjct: 426 YFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQG-QCVESIQKIHDLSLHPDET 484
Query: 436 ANHSTVVFDP 445
N ++F P
Sbjct: 485 KNMLEMIFTP 494
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 89/222 (40%), Gaps = 40/222 (18%)
Query: 184 RDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMKG--EITEENVIYIVE 241
RD R + ++KRR+ + KI + ++DA K +T++ V ++
Sbjct: 205 RDRAHREIKDIFYKAIQKRRQ------SQEKIDDILQTLLDATYKDGRPLTDDEVAGMLI 258
Query: 242 NINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGN--PVTESNLHELPYLQAA 299
+ +A T+ + W L +Q+K E TV N P+T L +L L
Sbjct: 259 GLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRC 318
Query: 300 VKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVV---------NAW--WLANNPXX 348
+KE LRL PI +++ M + G+TIP ++ V ++W L NP
Sbjct: 319 IKETLRLRPPI-MIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDR 377
Query: 349 XXXXXXXXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSC 390
D A G K F Y+PFG GR C
Sbjct: 378 YLQ----------------DNPASGEK--FAYVPFGAGRHRC 401
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 154/411 (37%), Gaps = 54/411 (13%)
Query: 3 QIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDIFTGNGQDM----- 57
Q YGP++R KLG+ V V +P+ + ++G P + + Q
Sbjct: 43 QKYGPIYREKLGNVESVYVIDPEDVALLFKSEG----PNPERFLIPPWVAYHQYYQRPIG 98
Query: 58 VFTVYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIRK 117
V W+K R + + N+ + +D V D VS I+K
Sbjct: 99 VLLKKSAAWKKDRVALNQEVMAPEATKNFLPL----LDAVSRDF------VSVLHRRIKK 148
Query: 118 RLQLMLYNIMYRMMFDAKFESQEDPLFIEATRF-----NSERSRLAQSFEYNYGDFIPLL 172
+ +F FES + +F E N E R + + +P+L
Sbjct: 149 AGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPML 208
Query: 173 R---PFLRGYLNK-------CRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHI 222
R + K D+ + + NF + R+ + + + I + +
Sbjct: 209 NLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSVHHDYRGILYRL--L 266
Query: 223 IDAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTV--- 279
D++M E + NV ++ ++TT +++W + E+ + +VQ +R E+
Sbjct: 267 GDSKMSFEDIKANVTEML----AGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQ 322
Query: 280 LKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNA 339
+G+ T L +P L+A++KE LRLH PI + + + + L + IP ++ + V
Sbjct: 323 AQGDMATMLQL--VPLLKASIKETLRLH-PISVTLQRYLVNDLVLRDYMIPAKTLVQVAI 379
Query: 340 WWLANNPXXXXXXXXXXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSC 390
+ L P NI FR L FG G R C
Sbjct: 380 YALGREPTFFFDPENFDPTRWLSKDKNITY--------FRNLGFGWGVRQC 422
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 154/411 (37%), Gaps = 54/411 (13%)
Query: 3 QIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDIFTGNGQDM----- 57
Q YGP++R KLG+ V V +P+ + ++G P + + Q
Sbjct: 40 QKYGPIYREKLGNVESVYVIDPEDVALLFKSEG----PNPERFLIPPWVAYHQYYQRPIG 95
Query: 58 VFTVYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIRK 117
V W+K R + + N+ + +D V D VS I+K
Sbjct: 96 VLLKKSAAWKKDRVALNQEVMAPEATKNFLPL----LDAVSRDF------VSVLHRRIKK 145
Query: 118 RLQLMLYNIMYRMMFDAKFESQEDPLFIEATRF-----NSERSRLAQSFEYNYGDFIPLL 172
+ +F FES + +F E N E R + + +P+L
Sbjct: 146 AGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPML 205
Query: 173 R---PFLRGYLNK-------CRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHI 222
R + K D+ + + NF + R+ + + + I + +
Sbjct: 206 NLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSVHHDYRGILYRL--L 263
Query: 223 IDAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTV--- 279
D++M E + NV ++ ++TT +++W + E+ + +VQ +R E+
Sbjct: 264 GDSKMSFEDIKANVTEML----AGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQ 319
Query: 280 LKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNA 339
+G+ T L +P L+A++KE LRLH PI + + + + L + IP ++ + V
Sbjct: 320 AQGDMATMLQL--VPLLKASIKETLRLH-PISVTLQRYLVNDLVLRDYMIPAKTLVQVAI 376
Query: 340 WWLANNPXXXXXXXXXXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSC 390
+ L P NI FR L FG G R C
Sbjct: 377 YALGREPTFFFDPENFDPTRWLSKDKNITY--------FRNLGFGWGVRQC 419
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 83/404 (20%), Positives = 156/404 (38%), Gaps = 41/404 (10%)
Query: 3 QIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGV--EFGSRPRNVVFDIFTGNGQDMVFT 60
Q YGP++R KLG+ V + P+ + +G E P + + + ++F
Sbjct: 45 QKYGPIYREKLGNLESVYIIHPEDVAHLFKFEGSYPERYDIPPWLAYHRYYQKPIGVLFK 104
Query: 61 VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIRKRLQ 120
G W+K R ++ + + N+ + ++ + D+ S+ K I +++
Sbjct: 105 KSGT-WKKDRVVLNTEVMAPEAIKNFIPL--------LNPVSQDFVSLLHKRI--KQQGS 153
Query: 121 LMLYNIMYRMMFDAKFESQEDPLFIE-----ATRFNSERSRLAQSFEYNYGDFIPLLR-- 173
+ +F FES + +F E N E + + + +PLL
Sbjct: 154 GKFVGDIKEDLFHFAFESITNVMFGERLGMLEETVNPEAQKFIDAVYKMFHTSVPLLNVP 213
Query: 174 -PFLRGYLNKC-RDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMKGE- 230
R + K RD FN EK +I + + I+ +K E
Sbjct: 214 PELYRLFRTKTWRDHVAAWDTIFNK--AEKYTEIFYQDLRRKTEFRNYPGILYCLLKSEK 271
Query: 231 ITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTESNL 290
+ E+V + + + TT +++W + E+ VQ+ +R E VL E ++
Sbjct: 272 MLLEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREE---VLNARRQAEGDI 328
Query: 291 HEL----PYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVNAWWLANNP 346
++ P L+A++KE LRLH PI + + + L + IP ++ + V + + +P
Sbjct: 329 SKMLQMVPLLKASIKETLRLH-PISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDP 387
Query: 347 XXXXXXXXXXXXXXXXXXCNIDAVAGGGKVDFRYLPFGVGRRSC 390
++ + FR L FG G R C
Sbjct: 388 AFFSSPDKFDPTRWLSKDKDL--------IHFRNLGFGWGVRQC 423
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 144/349 (41%), Gaps = 71/349 (20%)
Query: 3 QIYGPVFRLKLGSKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDIFTGNGQDMVFTVY 62
Q +GP+F+ +L KN++ +S LA + L T+ E + I G + + T
Sbjct: 41 QQFGPIFKTRLFGKNVIFISG-ALANRFLFTKEQETFQATWPLSTRILLGP--NALATQM 97
Query: 63 GEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLKNDYESVSTKGIVIRKRLQLM 122
GE R R+I+ F + D + +MD +V + + +++
Sbjct: 98 GEIHRSRRKILYQAFLPRTL-----DSYLPKMDGIVQGYLEQWGKAN----------EVI 142
Query: 123 LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNK 182
Y + RM FD + AT F E+ ++Q+ P L P+ Y+
Sbjct: 143 WYPQLRRMTFD-----------VAATLFMGEK--VSQN---------PQLFPWFETYIQG 180
Query: 183 CRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMKGEITEENVIYIV-- 240
L + N F + +R + + ++ II A+ + +EE+ + I+
Sbjct: 181 LFSLP---IPLPNTLFGKSQRA-------RALLLAELEKIIKARQQQPPSEEDALGILLA 230
Query: 241 ------ENINVAAIETTLWSMEWAIAE------------LVNHPEVQQKIRREISTVLKG 282
+ +++ ++ + + +A E L H ++++++R+E + +
Sbjct: 231 ARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLS 290
Query: 283 NPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPK 331
+T L ++PYL ++EVLRL P+ + +++ + GF PK
Sbjct: 291 QELTAETLKKMPYLDQVLQEVLRLIPPVGGGFREL-IQDCQFQGFHFPK 338
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 121/300 (40%), Gaps = 37/300 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 84 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 136
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 137 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 193
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 194 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 239
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + +A ETT + +A+ LV +P V QK E +
Sbjct: 240 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 299
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG-FTIPKESKIVV 337
VL + + +L Y+ + E LRL +P + E+ LGG + + K +++V
Sbjct: 300 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTVPAFSLYAK-EDTVLGGEYPLEKGDELMV 358
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 113/286 (39%), Gaps = 32/286 (11%)
Query: 50 FTGNGQDMVFTVYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK-----ND 104
F G+G+ +T + ++W+K I+ LP F+ + + Y M +D+ V ++ N
Sbjct: 81 FAGDGEFTSWT-HEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERLNA 135
Query: 105 YESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSFEY 163
E + + R L + L YR F++ + Q P R E Q
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR--- 190
Query: 164 NYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHII 223
P Y R Q N+ V+K A+GE+ + H++
Sbjct: 191 --------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTHML 238
Query: 224 ---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVL 280
D + + +EN+ Y + +A ETT + +A+ LV +P V QK E + VL
Sbjct: 239 NGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
Query: 281 KGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG 326
+ + +L Y+ + E LRL P + E+ LGG
Sbjct: 299 VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGG 343
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 118/298 (39%), Gaps = 33/298 (11%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 87 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 139
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 140 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 196
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHK-ISCAID 220
P Y R Q N+ V+K A+GE+ + +
Sbjct: 197 ----------TNPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQSDDLLTHML 244
Query: 221 HIIDAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVL 280
H D + + +EN+ Y + +A ETT + + + LV +P V QK E + VL
Sbjct: 245 HGKDPETGEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVL 304
Query: 281 KGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG-FTIPKESKIVV 337
+ + +L Y+ + E LRL P + E+ LGG + + K +I+V
Sbjct: 305 VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGGEYPLEKGDEIMV 361
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 119/298 (39%), Gaps = 33/298 (11%)
Query: 50 FTGNGQDMVFTVYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK-----ND 104
F G+G +T + ++W+K I+ LP F+ + + Y M +D+ V ++ N
Sbjct: 81 FAGDGLATSWT-HEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERLNA 135
Query: 105 YESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSFEY 163
E + + R L + L YR F++ + Q P R E Q
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR--- 190
Query: 164 NYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHII 223
P Y R Q N+ V+K A+GE+ + H++
Sbjct: 191 --------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTHML 238
Query: 224 ---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVL 280
D + + +EN+ Y + +A ETT + +A+ LV +P V QK E + VL
Sbjct: 239 NGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
Query: 281 KGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG-FTIPKESKIVV 337
+ + +L Y+ + E LRL P + E+ LGG + + K +++V
Sbjct: 299 VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGGEYPLEKGDELMV 355
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 120/300 (40%), Gaps = 37/300 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 84 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 136
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 137 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 193
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 194 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 239
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + +A ETT + +A+ LV +P V QK E +
Sbjct: 240 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 299
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG-FTIPKESKIVV 337
VL + + +L Y+ + E LRL P + E+ LGG + + K +++V
Sbjct: 300 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGGEYPLEKGDELMV 358
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 7/146 (4%)
Query: 196 NNFVEKRRKIMAANGEKHKISCAIDHII---DAQMKGEITEENVIYIVENINVAAIETTL 252
N+ V+K A+GE+ + H++ D + + +EN+ Y + +A ETT
Sbjct: 213 NDLVDKIIADRKASGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 270
Query: 253 WSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPL 312
+ +A+ LV +P V QK E + VL + + +L Y+ + E LRL P
Sbjct: 271 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 330
Query: 313 LVPHMNLEEAKLGG-FTIPKESKIVV 337
+ E+ LGG + + K +++V
Sbjct: 331 FSLYAK-EDTVLGGEYPLEKGDELMV 355
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 116/294 (39%), Gaps = 29/294 (9%)
Query: 40 SRPRNVVFDIFTGNGQDMVFTVYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVH 99
S+ R V D F G+G +T + ++W+K R I+ LP + + + Y M +D+ V
Sbjct: 73 SQARKFVRD-FAGDGLATSWT-HEKNWKKARNIL-LPRLSQQAMKGYHAMM---VDIAVQ 126
Query: 100 DLK-----NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSE 153
++ N E + + R L + L YR+ ++ + Q P R E
Sbjct: 127 LVQKWERLNSDEHIEVPEDMTRLTLDTIGLCGFNYRI--NSFYRDQPHPFITSMVRALDE 184
Query: 154 RSRLAQSFEYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKH 213
Q P Y R Q N+ V+K A+GE+
Sbjct: 185 VMNKLQR-----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS 231
Query: 214 K-ISCAIDHIIDAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKI 272
+ + H D + + +EN+ Y + +A ETT + +A+ LV +P V QK
Sbjct: 232 DDLLTHMLHGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKA 291
Query: 273 RREISTVLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG 326
E + VL + + +L Y+ + E LR+ P + E+ LGG
Sbjct: 292 AEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRIWPTAPAFSLYAK-EDTMLGG 344
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 120/300 (40%), Gaps = 37/300 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 81 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 133
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 190
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 191 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 236
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + +A ETT + +A+ LV +P V QK E +
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG-FTIPKESKIVV 337
VL + + +L Y+ + E LRL P + E+ LGG + + K +++V
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGGEYPLEKGDELMV 355
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 80/207 (38%), Gaps = 30/207 (14%)
Query: 246 AAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLK---------GNPV--TESNLHELP 294
A+ T+ + W++ +++ +PE + E+ L+ GNP+ +++ L++LP
Sbjct: 268 ASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLP 327
Query: 295 YLQAAVKEVLRLHTPIPLLVPHMNLEEAKL--------GGFTIPKESKIVVNAWWLANNP 346
L + +KE LRL + +N+ AK G + I K+ I + + +P
Sbjct: 328 VLDSIIKESLRLSS------ASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDP 381
Query: 347 XXXXXXXXXXXXXXXXXXCNIDAV--AGGGKVDFRYLPFGVGRRSCXXXXXXXXXXXXXX 404
G K+ + Y+PFG G C
Sbjct: 382 EIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFL 441
Query: 405 XKLVTSFEMKAPQGIDK---IDVSEKG 428
+++ FE++ +G K +D S G
Sbjct: 442 ILMLSYFELELIEGQAKCPPLDQSRAG 468
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 113/288 (39%), Gaps = 36/288 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 82 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 134
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 135 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 191
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 192 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 237
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + +A ETT + +A+ LV +P V QK E +
Sbjct: 238 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 297
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG 326
VL + + +L Y+ + E LRL P + E+ LGG
Sbjct: 298 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGG 344
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 113/288 (39%), Gaps = 36/288 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 81 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 133
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 190
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 191 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 236
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + +A ETT + +A+ LV +P V QK E +
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG 326
VL + + +L Y+ + E LRL P + E+ LGG
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGG 343
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 120/300 (40%), Gaps = 37/300 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 81 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 133
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 190
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 191 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 236
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + +A ETT + +A+ LV +P V QK E +
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG-FTIPKESKIVV 337
VL + + +L Y+ + E LRL P + E+ LGG + + K +++V
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGGEYPLEKGDELMV 355
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 80/207 (38%), Gaps = 30/207 (14%)
Query: 246 AAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLK---------GNPV--TESNLHELP 294
A+ T+ + W++ +++ +PE + E+ L+ GNP+ +++ L++LP
Sbjct: 268 ASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLP 327
Query: 295 YLQAAVKEVLRLHTPIPLLVPHMNLEEAKL--------GGFTIPKESKIVVNAWWLANNP 346
L + +KE LRL + +N+ AK G + I K+ I + + +P
Sbjct: 328 VLDSIIKESLRLSS------ASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDP 381
Query: 347 XXXXXXXXXXXXXXXXXXCNIDAV--AGGGKVDFRYLPFGVGRRSCXXXXXXXXXXXXXX 404
G K+ + Y+PFG G C
Sbjct: 382 EIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFL 441
Query: 405 XKLVTSFEMKAPQGIDK---IDVSEKG 428
+++ FE++ +G K +D S G
Sbjct: 442 ILMLSYFELELIEGQAKCPPLDQSRAG 468
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 113/288 (39%), Gaps = 36/288 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 82 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 134
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 135 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 191
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 192 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 237
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + +A ETT + +A+ LV +P V QK E +
Sbjct: 238 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 297
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG 326
VL + + +L Y+ + E LRL P + E+ LGG
Sbjct: 298 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGG 344
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 120/300 (40%), Gaps = 37/300 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 81 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 133
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 190
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 191 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 236
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + +A ETT + +A+ LV +P V QK E +
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG-FTIPKESKIVV 337
VL + + +L Y+ + E LRL P + E+ LGG + + K +++V
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGGEYPLEKGDELMV 355
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 120/300 (40%), Gaps = 37/300 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 81 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 133
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 190
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 191 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 236
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + +A ETT + +A+ LV +P V QK E +
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG-FTIPKESKIVV 337
VL + + +L Y+ + E LRL P + E+ LGG + + K +++V
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGGEYPLEKGDELMV 355
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 113/288 (39%), Gaps = 36/288 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 81 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 133
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 190
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 191 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 236
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + +A ETT + +A+ LV +P V QK E +
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG 326
VL + + +L Y+ + E LRL P + E+ LGG
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGG 343
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 113/288 (39%), Gaps = 36/288 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 81 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 133
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 190
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 191 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 236
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + +A ETT + +A+ LV +P V QK E +
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG 326
VL + + +L Y+ + E LRL P + E+ LGG
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGG 343
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 7/146 (4%)
Query: 196 NNFVEKRRKIMAANGEKHKISCAIDHII---DAQMKGEITEENVIYIVENINVAAIETTL 252
N+ V+K A+GE+ + H++ D + + +EN+ Y + +A ETT
Sbjct: 214 NDLVDKIIADRKASGEQS--DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTS 271
Query: 253 WSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPL 312
+ +A+ LV +P V QK E + VL + + +L Y+ + E LRL P
Sbjct: 272 GLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPA 331
Query: 313 LVPHMNLEEAKLGG-FTIPKESKIVV 337
+ E+ LGG + + K +++V
Sbjct: 332 FSLYAK-EDTVLGGEYPLEKGDELMV 356
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 120/300 (40%), Gaps = 37/300 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 81 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 133
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 190
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 191 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 236
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + +A ETT + +A+ LV +P V QK E +
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG-FTIPKESKIVV 337
VL + + +L Y+ + E LRL P + E+ LGG + + K +++V
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGGEYPLEKGDELMV 355
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 120/300 (40%), Gaps = 37/300 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 81 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 133
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 190
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 191 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 236
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + +A ETT + +A+ LV +P V QK E +
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG-FTIPKESKIVV 337
VL + + +L Y+ + E LRL P + E+ LGG + + K +++V
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGGEYPLEKGDELMV 355
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 120/300 (40%), Gaps = 37/300 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 84 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 136
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 137 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 193
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 194 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 239
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + +A ETT + +A+ LV +P V QK E +
Sbjct: 240 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 299
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG-FTIPKESKIVV 337
VL + + +L Y+ + E LRL P + E+ LGG + + K +++V
Sbjct: 300 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTSPAFSLYAK-EDTVLGGEYPLEKGDELMV 358
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 120/300 (40%), Gaps = 37/300 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 81 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 133
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 190
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 191 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 236
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + +A ETT + +A+ LV +P V QK E +
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG-FTIPKESKIVV 337
VL + + +L Y+ + E LRL P + E+ LGG + + K +++V
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGGEYPLEKGDELMV 355
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 113/288 (39%), Gaps = 36/288 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 82 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 134
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 135 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 191
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 192 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 237
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + +A ETT + +A+ LV +P V QK E +
Sbjct: 238 MLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 297
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG 326
VL + + +L Y+ + E LRL P + E+ LGG
Sbjct: 298 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPPFSLYAK-EDTVLGG 344
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 120/298 (40%), Gaps = 33/298 (11%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 81 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 133
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P I R E Q
Sbjct: 134 NADEYIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFIISMIRALDEVMNKLQR- 190
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHK-ISCAID 220
P Y R Q N+ V+K A+GE+ + +
Sbjct: 191 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQSDDLLTQML 238
Query: 221 HIIDAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVL 280
+ D + + + N+ Y + +A ETT + +A+ LV +P V QK+ E + VL
Sbjct: 239 NGKDPETGEPLDDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVL 298
Query: 281 KGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG-FTIPKESKIVV 337
+ + +L Y+ + E LRL P + E+ LGG + + K +++V
Sbjct: 299 VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGGEYPLEKGDEVMV 355
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 113/288 (39%), Gaps = 36/288 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 81 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 133
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 190
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 191 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 236
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + +A ETT + +A+ LV +P V QK E +
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG 326
VL + + +L Y+ + E LRL P + E+ LGG
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGG 343
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 119/298 (39%), Gaps = 33/298 (11%)
Query: 50 FTGNGQDMVFTVYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK-----ND 104
F G+G +T + ++W+K I+ LP F+ + + Y M +D+ V ++ N
Sbjct: 81 FAGDGLLTSWT-HEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERLNA 135
Query: 105 YESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSFEY 163
E + + R L + L YR F++ + Q P R E Q
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR--- 190
Query: 164 NYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHII 223
P Y R Q N+ V+K A+GE+ + H++
Sbjct: 191 --------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTHML 238
Query: 224 ---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVL 280
D + + +EN+ Y + +A E+T + +A+ LV +P V QK E + VL
Sbjct: 239 NGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
Query: 281 KGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG-FTIPKESKIVV 337
+ + +L Y+ + E LRL P + E+ LGG + + K +++V
Sbjct: 299 VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGGEYPLEKGDELMV 355
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 119/298 (39%), Gaps = 33/298 (11%)
Query: 50 FTGNGQDMVFTVYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK-----ND 104
F G+G +T + ++W+K I+ LP F+ + + Y M +D+ V ++ N
Sbjct: 82 FAGDGLLTSWT-HEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERLNA 136
Query: 105 YESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSFEY 163
E + + R L + L YR F++ + Q P R E Q
Sbjct: 137 DEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR--- 191
Query: 164 NYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHII 223
P Y R Q N+ V+K A+GE+ + H++
Sbjct: 192 --------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTHML 239
Query: 224 ---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVL 280
D + + +EN+ Y + +A E+T + +A+ LV +P V QK E + VL
Sbjct: 240 NGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL 299
Query: 281 KGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG-FTIPKESKIVV 337
+ + +L Y+ + E LRL P + E+ LGG + + K +++V
Sbjct: 300 VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGGEYPLEKGDELMV 356
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 119/298 (39%), Gaps = 33/298 (11%)
Query: 50 FTGNGQDMVFTVYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK-----ND 104
F G+G +T + ++W+K I+ LP F+ + + Y M +D+ V ++ N
Sbjct: 81 FAGDGLLTSWT-HEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERLNA 135
Query: 105 YESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSFEY 163
E + + R L + L YR F++ + Q P R E Q
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR--- 190
Query: 164 NYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHII 223
P Y R Q N+ V+K A+GE+ + H++
Sbjct: 191 --------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTHML 238
Query: 224 ---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVL 280
D + + +EN+ Y + +A E+T + +A+ LV +P V QK E + VL
Sbjct: 239 NGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
Query: 281 KGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG-FTIPKESKIVV 337
+ + +L Y+ + E LRL P + E+ LGG + + K +++V
Sbjct: 299 VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGGEYPLEKGDELMV 355
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 118/298 (39%), Gaps = 33/298 (11%)
Query: 50 FTGNGQDMVFTVYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK-----ND 104
F G+G +T + ++W+K I+ LP F+ + + Y M +D+ V ++ N
Sbjct: 81 FAGDGLATSWT-HEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERLNA 135
Query: 105 YESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSFEY 163
E + + R L + L YR F++ + Q P R E Q
Sbjct: 136 DEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR--- 190
Query: 164 NYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHII 223
P Y R Q N+ V+K A+GE+ + H++
Sbjct: 191 --------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTHML 238
Query: 224 ---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVL 280
D + + +EN+ Y + +A E T + +A+ LV +P V QK E + VL
Sbjct: 239 NGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
Query: 281 KGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG-FTIPKESKIVV 337
+ + +L Y+ + E LRL P + E+ LGG + + K +++V
Sbjct: 299 VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGGEYPLEKGDELMV 355
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 112/288 (38%), Gaps = 36/288 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 81 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 133
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 190
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 191 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 236
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + + ETT + +A+ LV +P V QK E +
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG 326
VL + + +L Y+ + E LRL P + E+ LGG
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGG 343
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 119/300 (39%), Gaps = 37/300 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 81 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 133
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 190
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 191 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 236
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + +A E T + +A+ LV +P V QK E +
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG-FTIPKESKIVV 337
VL + + +L Y+ + E LRL P + E+ LGG + + K +++V
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGGEYPLEKGDELMV 355
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 246 AAIETTLWSMEWAIAELVNHPEVQQKIRREISTVL-KGNPVTESNLHELPYLQAAVKEVL 304
A T+ + W + EL+ H + + E+ + G V+ L ++P L+ +KE L
Sbjct: 256 AGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETL 315
Query: 305 RLHTPIPLLV 314
RLH P+ +L+
Sbjct: 316 RLHPPLIILM 325
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 112/288 (38%), Gaps = 36/288 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 81 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 133
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 190
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 191 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 236
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + +A E T + +A+ LV +P V QK E +
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG 326
VL + + +L Y+ + E LRL P + E+ LGG
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGG 343
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 112/288 (38%), Gaps = 36/288 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 81 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 133
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 190
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 191 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 236
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + + ETT + +A+ LV +P V QK E +
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG 326
VL + + +L Y+ + E LRL P + E+ LGG
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGG 343
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 112/288 (38%), Gaps = 36/288 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 81 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 133
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 190
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 191 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 236
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + + ETT + +A+ LV +P V QK E +
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG 326
VL + + +L Y+ + E LRL P + E+ LGG
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGG 343
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 119/300 (39%), Gaps = 37/300 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 81 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 133
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 190
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 191 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 236
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + + ETT + +A+ LV +P V QK E +
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG-FTIPKESKIVV 337
VL + + +L Y+ + E LRL P + E+ LGG + + K +++V
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGGEYPLEKGDELMV 355
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 119/300 (39%), Gaps = 37/300 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 81 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 133
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 190
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 191 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 236
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + +A E T + +A+ LV +P V QK E +
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG-FTIPKESKIVV 337
VL + + +L Y+ + E LRL P + E+ LGG + + K +++V
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGGEYPLEKGDELMV 355
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 246 AAIETTLWSMEWAIAELVNHPEVQQKIRREISTVL-KGNPVTESNLHELPYLQAAVKEVL 304
A T+ + W + EL+ H + + E+ + G V+ L ++P L+ +KE L
Sbjct: 256 AGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETL 315
Query: 305 RLHTPIPLLV 314
RLH P+ +L+
Sbjct: 316 RLHPPLIILM 325
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 112/288 (38%), Gaps = 36/288 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 81 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 133
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 190
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 191 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 236
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + + ETT + +A+ LV +P V QK E +
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG 326
VL + + +L Y+ + E LRL P + E+ LGG
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGG 343
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 246 AAIETTLWSMEWAIAELVNHPEVQQKIRREISTVL-KGNPVTESNLHELPYLQAAVKEVL 304
A T+ + W + EL+ H + + E+ + G V+ L ++P L+ +KE L
Sbjct: 256 AGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETL 315
Query: 305 RLHTPIPLLV 314
RLH P+ +L+
Sbjct: 316 RLHPPLIILM 325
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 246 AAIETTLWSMEWAIAELVNHPEVQQKIRREISTVL-KGNPVTESNLHELPYLQAAVKEVL 304
A T+ + W + EL+ H + + E+ + G V+ L ++P L+ +KE L
Sbjct: 256 AGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETL 315
Query: 305 RLHTPIPLLV 314
RLH P+ +L+
Sbjct: 316 RLHPPLIILM 325
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 119/300 (39%), Gaps = 37/300 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 81 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 133
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 190
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 191 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 236
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + + ETT + +A+ LV +P V QK E +
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG-FTIPKESKIVV 337
VL + + +L Y+ + E LRL P + E+ LGG + + K +++V
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAK-EDTVLGGEYPLEKGDELMV 355
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 118/300 (39%), Gaps = 37/300 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 81 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 133
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 134 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 190
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 191 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 236
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + A E T + +A+ LV +P V QK E +
Sbjct: 237 MLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAAR 296
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG-FTIPKESKIVV 337
VL + + +L Y+ + E LRL P + E+ LGG + + K +++V
Sbjct: 297 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAK-EDTVLGGEYPLEKGDELMV 355
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 118/300 (39%), Gaps = 37/300 (12%)
Query: 50 FTGNGQDMVFT--VYGEHWRKMRRIMTLPFFTNKVVHNYSDMWEQEMDLVVHDLK----- 102
F G+G +FT + ++W+K I+ LP F+ + + Y M +D+ V ++
Sbjct: 82 FAGDG---LFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMM---VDIAVQLVQKWERL 134
Query: 103 NDYESVSTKGIVIRKRLQLM-LYNIMYRMMFDAKFESQEDPLFIEATRFNSERSRLAQSF 161
N E + + R L + L YR F++ + Q P R E Q
Sbjct: 135 NADEHIEVPEDMTRLTLDTIGLCGFNYR--FNSFYRDQPHPFITSMVRALDEAMNKLQR- 191
Query: 162 EYNYGDFIPLLRPFLRGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDH 221
P Y R Q N+ V+K A+GE+ + H
Sbjct: 192 ----------ANPDDPAYDENKRQFQEDIKVM--NDLVDKIIADRKASGEQS--DDLLTH 237
Query: 222 II---DAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIST 278
++ D + + +EN+ Y + A E T + +A+ LV +P V QK E +
Sbjct: 238 MLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAAR 297
Query: 279 VLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGG-FTIPKESKIVV 337
VL + + +L Y+ + E LRL P + E+ LGG + + K +++V
Sbjct: 298 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAK-EDTVLGGEYPLEKGDELMV 356
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 62/154 (40%), Gaps = 24/154 (15%)
Query: 184 RDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMKGEITEENVIYIVENI 243
R R + F + VE+RR + A+ + D G ++ + + I +
Sbjct: 185 RGQAAREVVNFILDLVERRR-----TEPGDDLLSALIRVQDDD-DGRLSADELTSIALVL 238
Query: 244 NVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTESNLHELPYLQAAVKEV 303
+A ET++ + L+ HP+ +RR+ S L AV+E+
Sbjct: 239 LLAGFETSVSLIGIGTYLLLTHPDQLALVRRDPSA-----------------LPNAVEEI 281
Query: 304 LRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVV 337
LR P P EE ++GG IP+ S ++V
Sbjct: 282 LRYIAP-PETTTRFAAEEVEIGGVAIPQYSTVLV 314
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 20/137 (14%)
Query: 206 MAANGEKHKISCAID---HIIDAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAEL 262
+ A EK K+ D I+ A G + + + +V + VA ETT + A+ +
Sbjct: 210 LVAAIEKRKVEPGDDLTSDIVRAFHDGVLDDYELRTLVATVLVAGYETTNHQLALAMYDF 269
Query: 263 VNHPEVQQKIRREISTVLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEA 322
HP+ KI K NP AV+EVLR +P+ + E+
Sbjct: 270 AQHPDQWMKI--------KENPELAPQ---------AVEEVLRWSPTLPVTATRVAAEDF 312
Query: 323 KLGGFTIPKESKIVVNA 339
++ G IP + + + A
Sbjct: 313 EVNGVRIPTGTPVFMCA 329
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 20/137 (14%)
Query: 206 MAANGEKHKISCAID---HIIDAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAEL 262
+ A EK K+ D I+ A G + + + +V + VA ETT + A+ +
Sbjct: 200 LVAAIEKRKVEPGDDLTSDIVRAFHDGVLDDYELRTLVATVLVAGYETTNHQLALAMYDF 259
Query: 263 VNHPEVQQKIRREISTVLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEA 322
HP+ KI K NP AV+EVLR +P+ + E+
Sbjct: 260 AQHPDQWMKI--------KENPELAPQ---------AVEEVLRWSPTLPVTATRVAAEDF 302
Query: 323 KLGGFTIPKESKIVVNA 339
++ G IP + + + A
Sbjct: 303 EVNGVRIPTGTPVFMCA 319
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 24/154 (15%)
Query: 184 RDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMKGEITEENVIYIVENI 243
R R + F + VE+RR + + A+ + D G ++ + + I +
Sbjct: 185 RGQAAREVVNFILDLVERRRTEPGDD-----LLSALIRVQDDD-DGRLSADELTSIALVL 238
Query: 244 NVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTESNLHELPYLQAAVKEV 303
+A E+++ + L+ HP+ +RR+ S L AV+E+
Sbjct: 239 LLAGFESSVSLIGIGTYLLLTHPDQLALVRRDPSA-----------------LPNAVEEI 281
Query: 304 LRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVV 337
LR P P EE ++GG IP+ S ++V
Sbjct: 282 LRYIAP-PETTTRFAAEEVEIGGVAIPQYSTVLV 314
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 24/154 (15%)
Query: 184 RDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMKGEITEENVIYIVENI 243
R R + F + VE+RR + + A+ + D G ++ + + I +
Sbjct: 184 RGQAAREVVNFILDLVERRRTEPGDD-----LLSALIRVQDDD-DGRLSADELTSIALVL 237
Query: 244 NVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTESNLHELPYLQAAVKEV 303
+A E+++ + L+ HP+ +RR+ S L AV+E+
Sbjct: 238 LLAGFESSVSLIGIGTYLLLTHPDQLALVRRDPSA-----------------LPNAVEEI 280
Query: 304 LRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVV 337
LR P P EE ++GG IP+ S ++V
Sbjct: 281 LRYIAP-PETTTRFAAEEVEIGGVAIPQYSTVLV 313
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 61/154 (39%), Gaps = 24/154 (15%)
Query: 184 RDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMKGEITEENVIYIVENI 243
R R + F + VE+RR + A+ + D G ++ + + I +
Sbjct: 185 RGQAAREVVNFILDLVERRR-----TEPGDDLLSALIRVQDDD-DGRLSADELTSIALVL 238
Query: 244 NVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTESNLHELPYLQAAVKEV 303
+A E ++ + L+ HP+ +RR+ S L AV+E+
Sbjct: 239 LLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSA-----------------LPNAVEEI 281
Query: 304 LRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVV 337
LR P P EE ++GG IP+ S ++V
Sbjct: 282 LRYIAP-PETTTRFAAEEVEIGGVAIPQYSTVLV 314
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 24/154 (15%)
Query: 184 RDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMKGEITEENVIYIVENI 243
R R + F + VE+RR + + A+ + D G ++ + + I +
Sbjct: 184 RGQAAREVVNFILDLVERRRTEPGDD-----LLSALIRVQDDD-DGRLSADELTSIALVL 237
Query: 244 NVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTESNLHELPYLQAAVKEV 303
+A E ++ + L+ HP+ +RR+ S L AV+E+
Sbjct: 238 LLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSA-----------------LPNAVEEI 280
Query: 304 LRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVV 337
LR P P EE ++GG IP+ S ++V
Sbjct: 281 LRYIAP-PETTTRFAAEEVEIGGVAIPQYSTVLV 313
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 19/121 (15%)
Query: 219 IDHIIDAQMK-GEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIS 277
+D +I Q++ G++ + V+ I + VA ETT+ ++ L+ HPE + R+
Sbjct: 215 LDELIARQLEEGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPG 274
Query: 278 TVLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVV 337
V V+E+LR T + + M E+ ++GG TI ++V
Sbjct: 275 AV-----------------SGVVEELLRF-TSVSDHIVRMAKEDIEVGGATIKAGDAVLV 316
Query: 338 N 338
+
Sbjct: 317 S 317
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 246 AAIETTLWSMEWAIAELVNHPEVQQ---KIRREISTVLKGNPVTESNLHELPYLQAAVKE 302
A T+ + W++ L+ HP+ ++ K+ +EI ++ + E+P+ + V+E
Sbjct: 277 AGQHTSTITTSWSMLHLM-HPKNKKWLDKLHKEIDE-FPAQLNYDNVMDEMPFAERCVRE 334
Query: 303 VLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVN 338
+R P+ L+V M E K+G + +PK I +
Sbjct: 335 SIRRDPPL-LMVMRMVKAEVKVGSYVVPKGDIIACS 369
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 246 AAIETTLWSMEWAIAELVNHPEVQQ---KIRREISTVLKGNPVTESNLHELPYLQAAVKE 302
A T+ + W++ L+ HP+ ++ K+ +EI ++ + E+P+ + V+E
Sbjct: 268 AGQHTSTITTSWSMLHLM-HPKNKKWLDKLHKEIDE-FPAQLNYDNVMDEMPFAERCVRE 325
Query: 303 VLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVN 338
+R P+ L+V M E K+G + +PK I +
Sbjct: 326 SIRRDPPL-LMVMRMVKAEVKVGSYVVPKGDIIACS 360
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 246 AAIETTLWSMEWAIAELVNHPEVQQ---KIRREISTVLKGNPVTESNLHELPYLQAAVKE 302
A T+ + W++ L+ HP+ ++ K+ +EI ++ + E+P+ + V+E
Sbjct: 262 AGQHTSTITTSWSMLHLM-HPKNKKWLDKLHKEIDE-FPAQLNYDNVMDEMPFAERCVRE 319
Query: 303 VLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVN 338
+R P+ L+V M E K+G + +PK I +
Sbjct: 320 SIRRDPPL-LMVMRMVKAEVKVGSYVVPKGDIIACS 354
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 24/154 (15%)
Query: 184 RDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMKGEITEENVIYIVENI 243
R R + F + VE+RR + IS D G ++ + + I +
Sbjct: 184 RGQAAREVVNFILDLVERRRTEPGDDLLSALISVQDDD------DGRLSADELTSIALVL 237
Query: 244 NVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTESNLHELPYLQAAVKEV 303
+A E ++ + L+ HP+ +R + S L AV+E+
Sbjct: 238 LLAGFEASVSLIGIGTYLLLTHPDQLALVRADPSA-----------------LPNAVEEI 280
Query: 304 LRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVV 337
LR P P EE ++GG IP+ S ++V
Sbjct: 281 LRYIAP-PETTTRFAAEEVEIGGVAIPQYSTVLV 313
>pdb|3CWO|X Chain X, A BetaALPHA-Barrel Built By The Combination Of Fragments
From Different Folds
Length = 237
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Query: 11 LKLGSKNLVV----VSEPDLATQVLHTQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGE 64
+K G+K+ +V V P L TQ+ T FGS+ V D +G+ MVFT G+
Sbjct: 72 IKAGAKDFIVNTAAVENPSLITQIAQT----FGSQAVVVAIDAKRVDGEFMVFTYSGK 125
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 48/103 (46%), Gaps = 18/103 (17%)
Query: 231 ITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTESNL 290
+++++++ ++ N+ +AA E ++ I L+N+PE + + S V +
Sbjct: 254 LSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLADRSLVPR--------- 304
Query: 291 HELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKES 333
A+ E LR P+ L+P ++ +GG I K++
Sbjct: 305 --------AIAETLRYKPPVQ-LIPRQLSQDTVVGGMEIKKDT 338
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 265 HPEVQQKIRREISTVLKGNPVTESNLHELPYLQAAVKEVLRLHTPIP 311
H ++ ++IR I + GN VT + ++P ++ V E LR+ P+P
Sbjct: 300 HTQLAEEIRGAIKSYGDGN-VTLEAIEQMPLTKSVVYESLRIEPPVP 345
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 30/114 (26%)
Query: 235 NVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTESNLHELP 294
NV+ ++ V +TT SM + L +P+ K LK NP
Sbjct: 258 NVLLLI----VGGNDTTRNSMTGGVLALHKNPDQFAK--------LKANPA--------- 296
Query: 295 YLQAAVKEVLRLHTPIPLLVPHMN---LEEAKLGGFTIPKESKIVVNAWWLANN 345
++ V E++R TP+ HM + +++LGG TI K K+V+ W+ + N
Sbjct: 297 LVETMVPEIIRWQTPLA----HMRRTAIADSELGGKTIRKGDKVVM--WYYSGN 344
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 17/107 (15%)
Query: 231 ITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTESNL 290
+T E ++ + + VA ETT+ + + L++HP+ +R +++
Sbjct: 248 LTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMT------------- 294
Query: 291 HELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVV 337
L AV+E+LR P+ +E L G IP ++V
Sbjct: 295 ----LLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLV 337
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 17/107 (15%)
Query: 231 ITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTESNL 290
+T E ++ + + VA ETT+ + + L++HP+ +R +++
Sbjct: 248 LTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMT------------- 294
Query: 291 HELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVV 337
L AV+E+LR P+ +E L G IP ++V
Sbjct: 295 ----LLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLV 337
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 17/107 (15%)
Query: 231 ITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTESNL 290
+T E ++ + + VA ETT+ + + L++HP+ +R +++
Sbjct: 248 LTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMT------------- 294
Query: 291 HELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVV 337
L AV+E+LR P+ +E L G IP ++V
Sbjct: 295 ----LLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLV 337
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 18/109 (16%)
Query: 229 GEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTES 288
GEIT + +V ++ A ++TT+ + A+ L P Q++R +P
Sbjct: 232 GEITPDEAPLLVRSLLSAGLDTTVNGIGAAVYCLARFPGELQRLR--------SDPTLAR 283
Query: 289 NLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVV 337
N A +E +R +P+ E +LGG I + K+++
Sbjct: 284 N---------AFEEAVRFESPVQTFF-RTTTREVELGGAVIGEGEKVLM 322
>pdb|2LLE|A Chain A, Computational Design Of An Eight-Stranded
(BetaALPHA)-Barrel From Fragments Of Different Folds
Length = 234
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Query: 11 LKLGSKNLVV----VSEPDLATQVLHTQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGE 64
+K G+K +V V P L TQ+ T FGS+ V D +G+ MVFT G+
Sbjct: 72 IKAGAKGFIVNTAAVENPSLITQLAQT----FGSQAVVVAIDAKRVDGEFMVFTYSGK 125
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 222 IIDAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTV 279
+ D GEI E +I + +A ETT ++ L++HPE +R + S V
Sbjct: 220 VADQLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLV 277
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 222 IIDAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTV 279
+ D GEI E +I + +A ETT ++ L++HPE +R + S V
Sbjct: 220 VADQLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLV 277
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 222 IIDAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTV 279
+ D GEI E +I + +A ETT ++ L++HPE +R + S V
Sbjct: 220 VADQLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLV 277
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 52/115 (45%), Gaps = 18/115 (15%)
Query: 225 AQMKGE-ITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGN 283
+ M G+ +++E ++ + + +A ETT+ + + L+ HP+ Q+K+ E +++
Sbjct: 214 SDMDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD-QRKLLAEDPSLIS-- 270
Query: 284 PVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVN 338
+AV+E LR +P+ E+ G TIP +++
Sbjct: 271 --------------SAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLG 311
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 222 IIDAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTV 279
+ D GEI E +I + +A ETT ++ L++HPE +R + S V
Sbjct: 220 VADQLANGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRSLV 277
>pdb|3IZQ|1 Chain 1, Structure Of The Dom34-Hbs1-Gdpnp Complex Bound To A
Translating Ribosome
Length = 611
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 271 KIRREISTVLKGNPVTESNLHELPYLQAAVKEV--LRLHTPIPLLVPHMNLEEAKLGGFT 328
+I+R IS + KGN ++ + L Q A E+ + + IPLL H E +LG
Sbjct: 537 RIKRLISFIDKGNTASKKKIRHLGSKQRAFVEIELIEVKRWIPLLTAH---ENDRLGRVV 593
Query: 329 IPKESKIVV 337
+ K+ + +
Sbjct: 594 LRKDGRTIA 602
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 7/69 (10%)
Query: 21 VSEPDLATQVLHTQGVEFGSRPRNVVFDIFTGN-------GQDMVFTVYGEHWRKMRRIM 73
VS+P L Q+L + V +R F G + +FT YG + RK+RR++
Sbjct: 43 VSDPVLLKQLLTSSDVSKDARAHWPAFGEVVGTWPLALWVAVENMFTAYGPNHRKLRRLV 102
Query: 74 TLPFFTNKV 82
F +V
Sbjct: 103 APAFSARRV 111
>pdb|2X9P|A Chain A, X-Ray Structure Of The Substrate-Free Cytochrome P450 Pimd
- A Polyene Macrolide Antibiotic Pimaricin Epoxidase
pdb|2XBK|A Chain A, X-Ray Structure Of The Substrate-Bound Cytochrome P450
Pimd - A Polyene Macrolide Antibiotic Pimaricin
Epoxidase
Length = 404
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 18/119 (15%)
Query: 212 KHKISCAIDHIIDAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQK 271
+HK + II GE+TE+ V ++ + A +++ M+ + L HP+ +
Sbjct: 207 EHKRAEPGPDIISRLNDGELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRA- 265
Query: 272 IRREISTVLKGNPVTESNLHELPYLQAAVKEVLRL-HTPIPLLVPHMNLEEAKLGGFTI 329
+ L + + AV+EVLR +L P E+ + GG TI
Sbjct: 266 ----------------AALADPDVMARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTI 308
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 27/153 (17%)
Query: 177 RGYLNKCRDLQCRRLAFFNNNFVEKRRKIMAANGEKHKISCAIDHIIDAQMKGEITEENV 236
R L + + + +A+F ++KR++ H I ++ + K ++TEE
Sbjct: 174 RKALTEGNIMAVQAMAYFKE-LIQKRKR--------HPQQDMISMLLKGREKDKLTEEEA 224
Query: 237 IYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTESNLHELPYL 296
+ +A ETT+ + ++ L+ HPE K+R NP +
Sbjct: 225 ASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRE--------NP---------DLI 267
Query: 297 QAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTI 329
AV+E LR +P + + E+ + G TI
Sbjct: 268 GTAVEECLRYESPTQ-MTARVASEDIDICGVTI 299
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From
Mycobacterium Smegmatis
Length = 433
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 21/121 (17%)
Query: 219 IDHIIDAQMKGE-ITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREIS 277
+ +I+A + GE ++++ + V + VA ETT S+ + +P+ + ++E
Sbjct: 223 VTKLIEADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITHGMIAFAQNPDQWELYKKE-- 280
Query: 278 TVLKGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVV 337
P T A E++R TP+ LE+ +LGG I K ++V+
Sbjct: 281 -----RPET------------AADEIVRWATPVSAFQ-RTALEDVELGGVQIKKGQRVVM 322
Query: 338 N 338
+
Sbjct: 323 S 323
>pdb|3P26|A Chain A, Crystal Structure Of S. Cerevisiae Hbs1 Protein
(Apo-Form), A Translational Gtpase Involved In Rna
Quality Control Pathways And Interacting With
Dom34PELOTA
pdb|3P26|B Chain B, Crystal Structure Of S. Cerevisiae Hbs1 Protein
(Apo-Form), A Translational Gtpase Involved In Rna
Quality Control Pathways And Interacting With
Dom34PELOTA
Length = 483
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 271 KIRREISTVLKGNPVTESNLHELPYLQAAVKEV--LRLHTPIPLLVPHMNLEEAKLGGFT 328
+I+R IS + KGN ++ + L Q A E+ + + IPLL H E +LG
Sbjct: 403 RIKRLISFIDKGNTASKKKIRHLGSKQRAFVEIELIEVKRWIPLLTAH---ENDRLGRVV 459
Query: 329 IPKESKIVV 337
+ K+ + +
Sbjct: 460 LRKDGRTIA 468
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 18/118 (15%)
Query: 222 IIDAQMKGE-ITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVL 280
+I A G+ +T+ ++ ++ + A ETT+ + A+ L HPE + + VL
Sbjct: 217 LIQASENGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQR-------ALVL 269
Query: 281 KGNPVTESNLHELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVN 338
G A V+E LR TP ++ E+ +G IP ++V+
Sbjct: 270 SGEA----------EWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVS 317
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 23/119 (19%)
Query: 222 IIDAQMKGEITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLK 281
+ D + G +T E ++ + A ETT + + L++ PE+ ++R++
Sbjct: 225 VTDHLVPGNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDPD---- 280
Query: 282 GNPVTESNLHELPYLQAAVKEVLRLHT---PIPLLVPHMNLEEAKLGGFTIPKESKIVV 337
+ AAV E+LR+ + IPL V E+ +L G T+P + ++
Sbjct: 281 -------------LMPAAVDELLRVLSVADSIPLRV---AAEDIELSGRTVPADDGVIA 323
>pdb|2WJZ|A Chain A, Crystal Structure Of (Hish) K181a Y138a Mutant Of
Imidazoleglycerolphosphate Synthase (Hish Hisf) Which
Displays Constitutive Glutaminase Activity
pdb|2WJZ|C Chain C, Crystal Structure Of (Hish) K181a Y138a Mutant Of
Imidazoleglycerolphosphate Synthase (Hish Hisf) Which
Displays Constitutive Glutaminase Activity
pdb|2WJZ|E Chain E, Crystal Structure Of (Hish) K181a Y138a Mutant Of
Imidazoleglycerolphosphate Synthase (Hish Hisf) Which
Displays Constitutive Glutaminase Activity
pdb|3ZR4|A Chain A, Structural Evidence For Ammonia Tunneling Across The
(Beta- Alpha)8 Barrel Of The Imidazole Glycerol
Phosphate Synthase Bienzyme Complex
pdb|3ZR4|C Chain C, Structural Evidence For Ammonia Tunneling Across The
(Beta- Alpha)8 Barrel Of The Imidazole Glycerol
Phosphate Synthase Bienzyme Complex
pdb|3ZR4|E Chain E, Structural Evidence For Ammonia Tunneling Across The
(Beta- Alpha)8 Barrel Of The Imidazole Glycerol
Phosphate Synthase Bienzyme Complex
Length = 253
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 15 SKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGE 64
S N V P L TQ+ T FGS+ V D +G+ MVFT G+
Sbjct: 101 SINTAAVENPSLITQIAQT----FGSQAVVVAIDAKRVDGEFMVFTYSGK 146
>pdb|1GPW|A Chain A, Structural Evidence For Ammonia Tunneling Across The
(BetaALPHA)8 BARREL OF THE IMIDAZOLE GLYCEROL PHOSPHATE
Synthase Bienzyme Complex.
pdb|1GPW|C Chain C, Structural Evidence For Ammonia Tunneling Across The
(BetaALPHA)8 BARREL OF THE IMIDAZOLE GLYCEROL PHOSPHATE
Synthase Bienzyme Complex.
pdb|1GPW|E Chain E, Structural Evidence For Ammonia Tunneling Across The
(BetaALPHA)8 BARREL OF THE IMIDAZOLE GLYCEROL PHOSPHATE
Synthase Bienzyme Complex
Length = 253
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 15 SKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGE 64
S N V P L TQ+ T FGS+ V D +G+ MVFT G+
Sbjct: 101 SINTAAVENPSLITQIAQT----FGSQAVVVAIDAKRVDGEFMVFTYSGK 146
>pdb|1THF|D Chain D, Cyclase Subunit Of Imidazoleglycerolphosphate Synthase
From Thermotoga Maritima
Length = 253
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 15 SKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGE 64
S N V P L TQ+ T FGS+ V D +G+ MVFT G+
Sbjct: 101 SINTAAVENPSLITQIAQT----FGSQAVVVAIDAKRVDGEFMVFTYSGK 146
>pdb|3P27|A Chain A, Crystal Structure Of S. Cerevisiae Hbs1 Protein (Gdp-Bound
Form), A Translational Gtpase Involved In Rna Quality
Control Pathways And Interacting With Dom34PELOTA
pdb|3P27|B Chain B, Crystal Structure Of S. Cerevisiae Hbs1 Protein (Gdp-Bound
Form), A Translational Gtpase Involved In Rna Quality
Control Pathways And Interacting With Dom34PELOTA
Length = 483
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 271 KIRREISTVLKGNPVTESNLHELPYLQAAVKEV--LRLHTPIPLLVPHMNLEEAKLGGFT 328
+I+R IS + KGN ++ + L Q A E+ + + IPLL H E +LG
Sbjct: 403 RIKRLISFIDKGNTASKKKIRHLGSKQRAFVEIELIEVKRWIPLLTAH---ENDRLGRVV 459
Query: 329 IPKESKIVV 337
+ K+ + +
Sbjct: 460 LRKDGRTIA 468
>pdb|2A0N|A Chain A, Crystal Structure Of Imidazole Glycerol Phosphate Synthase
Subunit Hisf (ec 4.1.3.-) (tm1036) From Thermotoga
Maritima At 1.64 A Resolution
Length = 265
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 15 SKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGE 64
S N V P L TQ+ T FGS+ V D +G+ MVFT G+
Sbjct: 113 SINTAAVENPSLITQIAQT----FGSQAVVVAIDAKRVDGEFMVFTYSGK 158
>pdb|1VH7|A Chain A, Crystal Structure Of A Cyclase Subunit Of
Imidazolglycerolphosphate Synthase
Length = 265
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 15 SKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGE 64
S N V P L TQ+ T FGS+ V D +G+ MVFT G+
Sbjct: 103 SINTAAVENPSLITQIAQT----FGSQAVVVAIDAKRVDGEFMVFTYSGK 148
>pdb|3TDN|A Chain A, Computationally Designed Two-Fold Symmetric Tim-Barrel
Protein, Flr
pdb|3TDN|B Chain B, Computationally Designed Two-Fold Symmetric Tim-Barrel
Protein, Flr
Length = 247
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Query: 15 SKNLVVVSEPDLATQVLHTQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGEH 65
S N V P L TQ+ T FGS+ V D +G+ MVFT G+
Sbjct: 106 SINTAAVENPSLITQIAQT----FGSQAVVVAIDAKRVDGEFMVFTYSGKK 152
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 48/108 (44%), Gaps = 17/108 (15%)
Query: 231 ITEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTESNL 290
+++E ++ + + +A ETT+ + + L+ HP+ Q+K+ E +++
Sbjct: 221 LSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD-QRKLLAEDPSLIS--------- 270
Query: 291 HELPYLQAAVKEVLRLHTPIPLLVPHMNLEEAKLGGFTIPKESKIVVN 338
+AV+E LR +P+ E+ G TIP +++
Sbjct: 271 -------SAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLG 311
>pdb|1H85|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Val 136 Replaced By
Leu (V136l)
Length = 295
Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 233 EENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTESNLH- 291
E NVI + +A + T LW M + AE +PE Q K S ++ G P T + L+
Sbjct: 139 EANVIMLATGTGIAPMRTYLWRM-FKDAERAANPEYQFK---GFSWLVFGVPTTPNILYK 194
Query: 292 -ELPYLQAAVKEVLRL 306
EL +Q + RL
Sbjct: 195 EELEEIQQKYPDNFRL 210
>pdb|1QGZ|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 78 Replaced By
Asp (L78d)
Length = 295
Score = 28.1 bits (61), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 233 EENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTESNLH- 291
E NVI + +A + T LW M + AE +PE Q K S ++ G P T + L+
Sbjct: 139 EANVIMLATGTGIAPMRTYLWRM-FKDAERAANPEYQFK---GFSWLVFGVPTTPNILYK 194
Query: 292 -ELPYLQAAVKEVLRL 306
EL +Q + RL
Sbjct: 195 EELEEIQQKYPDNFRL 210
>pdb|1QH0|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Leu 76 Mutated By
Asp And Leu 78 Mutated By Asp
Length = 295
Score = 28.1 bits (61), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 233 EENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTESNLH- 291
E NVI + +A + T LW M + AE +PE Q K S ++ G P T + L+
Sbjct: 139 EANVIMLATGTGIAPMRTYLWRM-FKDAERAANPEYQFK---GFSWLVFGVPTTPNILYK 194
Query: 292 -ELPYLQAAVKEVLRL 306
EL +Q + RL
Sbjct: 195 EELEEIQQKYPDNFRL 210
>pdb|1B2R|A Chain A, Ferredoxin-Nadp+ Reductase (Mutation: E 301 A)
Length = 304
Score = 28.1 bits (61), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 233 EENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTESNLH- 291
E NVI + +A + T LW M + AE +PE Q K S ++ G P T + L+
Sbjct: 148 EANVIMLATGTGIAPMRTYLWRM-FKDAERAANPEYQFK---GFSWLVFGVPTTPNILYK 203
Query: 292 -ELPYLQAAVKEVLRL 306
EL +Q + RL
Sbjct: 204 EELEEIQQKYPDNFRL 219
>pdb|1E62|A Chain A, Ferredoxin:nadp+ Reductase Mutant With Lys 75 Replaced By
Arg (K75r)
Length = 304
Score = 28.1 bits (61), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 233 EENVIYIVENINVAAIETTLWSMEWAIAELVNHPEVQQKIRREISTVLKGNPVTESNLH- 291
E NVI + +A + T LW M + AE +PE Q K S ++ G P T + L+
Sbjct: 148 EANVIMLATGTGIAPMRTYLWRM-FKDAERAANPEYQFK---GFSWLVFGVPTTPNILYK 203
Query: 292 -ELPYLQAAVKEVLRL 306
EL +Q + RL
Sbjct: 204 EELEEIQQKYPDNFRL 219
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,504,285
Number of Sequences: 62578
Number of extensions: 479600
Number of successful extensions: 1407
Number of sequences better than 100.0: 150
Number of HSP's better than 100.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 1219
Number of HSP's gapped (non-prelim): 184
length of query: 456
length of database: 14,973,337
effective HSP length: 102
effective length of query: 354
effective length of database: 8,590,381
effective search space: 3040994874
effective search space used: 3040994874
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)