Query 012772
Match_columns 456
No_of_seqs 222 out of 2760
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 15:56:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012772.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012772hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n71_A Histone lysine methyltr 100.0 3.9E-72 1.3E-76 574.2 35.5 401 3-451 25-452 (490)
2 3qww_A SET and MYND domain-con 100.0 1.1E-71 3.8E-76 562.4 32.4 393 3-442 25-432 (433)
3 3qwp_A SET and MYND domain-con 100.0 2.3E-70 7.9E-75 553.8 31.7 388 3-448 23-427 (429)
4 3n71_A Histone lysine methyltr 99.6 3E-14 1E-18 145.6 14.7 112 309-420 352-463 (490)
5 3edt_B KLC 2, kinesin light ch 99.4 6.5E-12 2.2E-16 117.1 19.4 138 310-447 45-182 (283)
6 2odd_A Protein CBFA2T1; MYND z 99.4 6.4E-14 2.2E-18 101.3 2.3 57 4-70 3-59 (64)
7 3edt_B KLC 2, kinesin light ch 99.3 1.6E-11 5.6E-16 114.3 15.0 128 318-445 11-138 (283)
8 3qww_A SET and MYND domain-con 99.3 4.7E-12 1.6E-16 127.4 11.9 84 362-445 310-393 (433)
9 3rq4_A Histone-lysine N-methyl 99.3 3.3E-13 1.1E-17 123.7 1.6 80 196-276 154-235 (247)
10 3qwp_A SET and MYND domain-con 99.3 1.6E-11 5.4E-16 123.6 13.4 97 309-405 330-426 (429)
11 3nf1_A KLC 1, kinesin light ch 99.3 1.4E-10 4.7E-15 109.9 19.1 136 312-447 73-208 (311)
12 3nf1_A KLC 1, kinesin light ch 99.3 1.2E-10 4E-15 110.4 17.9 136 310-445 29-164 (311)
13 3s8p_A Histone-lysine N-methyl 99.2 3E-12 1E-16 118.4 1.7 80 196-275 183-263 (273)
14 4gcn_A Protein STI-1; structur 99.1 3.2E-09 1.1E-13 87.8 15.3 101 312-421 12-112 (127)
15 1n3j_A A612L, histone H3 lysin 99.0 9.4E-11 3.2E-15 96.1 3.3 47 211-257 57-105 (119)
16 3rkv_A Putative peptidylprolyl 99.0 1.2E-08 4.1E-13 87.7 16.3 128 306-448 9-146 (162)
17 2xev_A YBGF; tetratricopeptide 99.0 9.8E-09 3.3E-13 84.0 15.0 121 312-447 6-126 (129)
18 4gco_A Protein STI-1; structur 99.0 1.6E-08 5.5E-13 83.5 15.9 104 311-435 16-119 (126)
19 3ro3_A PINS homolog, G-protein 98.9 4.3E-08 1.5E-12 82.5 16.8 131 310-446 11-141 (164)
20 3upv_A Heat shock protein STI1 98.9 4.9E-08 1.7E-12 79.8 16.5 121 308-446 4-124 (126)
21 2hr2_A Hypothetical protein; a 98.9 1.1E-07 3.8E-12 81.2 18.0 135 307-443 10-152 (159)
22 3ulq_A Response regulator aspa 98.9 2.2E-08 7.6E-13 98.6 15.3 127 314-445 109-235 (383)
23 3gyz_A Chaperone protein IPGC; 98.9 3.9E-08 1.3E-12 84.0 14.7 111 309-440 37-147 (151)
24 3ulq_A Response regulator aspa 98.9 5.1E-08 1.7E-12 96.0 17.5 131 310-445 145-275 (383)
25 2dj8_A Protein CBFA2T1; zinc f 98.9 9E-10 3.1E-14 78.1 3.1 45 26-71 14-58 (60)
26 2w5y_A Histone-lysine N-methyl 98.9 1.5E-09 5E-14 96.2 4.7 61 218-278 124-191 (192)
27 2xcb_A PCRH, regulatory protei 98.8 1.6E-07 5.5E-12 78.7 16.0 120 309-449 19-138 (142)
28 3gw4_A Uncharacterized protein 98.8 1.4E-07 4.9E-12 83.2 16.5 130 310-444 28-157 (203)
29 2vgx_A Chaperone SYCD; alterna 98.8 1.6E-07 5.4E-12 79.7 15.6 115 308-443 21-135 (148)
30 2fbn_A 70 kDa peptidylprolyl i 98.8 2.1E-07 7E-12 82.7 17.0 123 306-446 36-168 (198)
31 3sz7_A HSC70 cochaperone (SGT) 98.8 3.5E-07 1.2E-11 78.5 17.6 99 308-422 11-109 (164)
32 2jw6_A Deformed epidermal auto 98.8 1.4E-09 4.9E-14 74.8 1.7 46 23-69 5-50 (52)
33 3q15_A PSP28, response regulat 98.8 1.7E-07 5.8E-12 92.1 17.3 130 310-445 143-272 (378)
34 3u3w_A Transcriptional activat 98.8 1.1E-07 3.7E-12 90.2 15.4 129 315-448 122-250 (293)
35 2qfc_A PLCR protein; TPR, HTH, 98.8 2E-07 6.8E-12 88.3 17.1 112 310-425 157-270 (293)
36 1qqe_A Vesicular transport pro 98.8 1.8E-07 6.2E-12 88.7 16.7 125 315-445 44-169 (292)
37 3u3w_A Transcriptional activat 98.8 1.4E-07 4.6E-12 89.5 15.5 112 311-425 158-270 (293)
38 4g1t_A Interferon-induced prot 98.8 5.9E-08 2E-12 97.9 13.4 117 314-435 57-176 (472)
39 3ro3_A PINS homolog, G-protein 98.8 2.2E-07 7.4E-12 78.1 14.8 111 310-424 51-161 (164)
40 2od1_A Protein CBFA2T1; zinc f 98.7 3.2E-09 1.1E-13 75.1 2.5 44 26-70 12-55 (60)
41 1elr_A TPR2A-domain of HOP; HO 98.7 8.8E-07 3E-11 71.6 17.7 104 309-421 5-108 (131)
42 2dba_A Smooth muscle cell asso 98.7 2.7E-07 9.2E-12 76.8 14.6 111 311-439 31-141 (148)
43 3q49_B STIP1 homology and U bo 98.7 9.2E-07 3.1E-11 72.8 17.7 100 310-425 11-110 (137)
44 2d8q_A BLU protein, zinc finge 98.7 1.1E-08 3.6E-13 74.6 4.6 45 27-72 15-59 (70)
45 2qfc_A PLCR protein; TPR, HTH, 98.7 2.9E-07 9.8E-12 87.2 15.8 126 314-445 121-247 (293)
46 4gyw_A UDP-N-acetylglucosamine 98.7 1.2E-07 4.1E-12 101.4 14.5 91 315-421 50-140 (723)
47 1ihg_A Cyclophilin 40; ppiase 98.7 5.5E-07 1.9E-11 88.7 17.7 123 302-437 217-347 (370)
48 3gw4_A Uncharacterized protein 98.7 4.8E-07 1.6E-11 79.8 15.5 126 311-441 69-194 (203)
49 4a1s_A PINS, partner of inscut 98.7 5.1E-07 1.8E-11 89.1 17.4 132 307-447 47-179 (411)
50 3q15_A PSP28, response regulat 98.7 4E-07 1.4E-11 89.5 16.3 111 310-425 184-294 (378)
51 3ooi_A Histone-lysine N-methyl 98.7 7.3E-09 2.5E-13 94.8 3.3 61 218-278 165-231 (232)
52 3qky_A Outer membrane assembly 98.7 2.5E-07 8.5E-12 85.8 13.3 114 309-437 16-137 (261)
53 3k9i_A BH0479 protein; putativ 98.6 1.6E-07 5.4E-12 76.0 10.0 97 321-435 3-99 (117)
54 1a17_A Serine/threonine protei 98.6 2.5E-06 8.4E-11 72.4 18.0 107 307-434 12-118 (166)
55 2ifu_A Gamma-SNAP; membrane fu 98.6 3.6E-07 1.2E-11 87.3 13.5 124 315-445 43-166 (307)
56 1elw_A TPR1-domain of HOP; HOP 98.6 1.3E-06 4.5E-11 69.1 14.9 108 308-436 4-111 (118)
57 4ga2_A E3 SUMO-protein ligase 98.6 5.9E-07 2E-11 76.2 13.4 109 312-441 35-144 (150)
58 3ro2_A PINS homolog, G-protein 98.6 1.5E-06 5.3E-11 82.1 17.6 128 310-446 7-135 (338)
59 4a1s_A PINS, partner of inscut 98.6 8.9E-07 3E-11 87.3 16.3 130 310-445 225-354 (411)
60 3qky_A Outer membrane assembly 98.6 6.4E-07 2.2E-11 83.0 14.3 118 321-453 110-251 (261)
61 2vyi_A SGTA protein; chaperone 98.6 1.9E-06 6.6E-11 69.4 15.6 114 308-445 12-125 (131)
62 3urz_A Uncharacterized protein 98.6 2E-06 6.7E-11 77.1 17.0 106 308-434 4-125 (208)
63 2lni_A Stress-induced-phosphop 98.6 1.1E-06 3.6E-11 71.6 13.7 95 311-421 19-113 (133)
64 4g1t_A Interferon-induced prot 98.6 2.7E-07 9.2E-12 93.0 12.2 98 346-443 47-145 (472)
65 3h6l_A Histone-lysine N-methyl 98.6 1.3E-08 4.3E-13 95.5 2.0 63 218-280 190-258 (278)
66 3ope_A Probable histone-lysine 98.6 2.4E-08 8.3E-13 90.8 3.8 63 218-280 146-215 (222)
67 4gyw_A UDP-N-acetylglucosamine 98.6 3.7E-07 1.3E-11 97.6 13.3 97 309-421 10-106 (723)
68 2ifu_A Gamma-SNAP; membrane fu 98.6 9.9E-07 3.4E-11 84.2 15.0 110 311-425 79-188 (307)
69 3sf4_A G-protein-signaling mod 98.6 1.7E-06 5.8E-11 84.6 17.0 127 311-446 12-139 (406)
70 3sf4_A G-protein-signaling mod 98.6 1.6E-06 5.5E-11 84.8 16.7 126 313-444 192-317 (406)
71 1hz4_A MALT regulatory protein 98.5 1.7E-06 5.9E-11 84.4 16.7 110 313-424 58-167 (373)
72 1hxi_A PEX5, peroxisome target 98.5 4.7E-07 1.6E-11 73.9 10.6 94 312-421 21-114 (121)
73 1p5q_A FKBP52, FK506-binding p 98.5 1.3E-06 4.3E-11 84.8 15.4 101 308-421 147-259 (336)
74 3ro2_A PINS homolog, G-protein 98.5 2.1E-06 7.3E-11 81.1 16.4 129 312-446 187-315 (338)
75 1na0_A Designed protein CTPR3; 98.5 4.5E-06 1.5E-10 66.6 15.8 94 312-421 13-106 (125)
76 4ga2_A E3 SUMO-protein ligase 98.5 3.4E-07 1.2E-11 77.8 8.9 103 318-444 7-109 (150)
77 1qqe_A Vesicular transport pro 98.5 2.2E-06 7.5E-11 81.2 15.5 109 310-422 79-188 (292)
78 4gcn_A Protein STI-1; structur 98.5 7.3E-07 2.5E-11 73.4 10.6 90 348-446 6-95 (127)
79 4eqf_A PEX5-related protein; a 98.5 1.4E-06 4.7E-11 84.6 14.2 116 313-444 218-337 (365)
80 1wao_1 Serine/threonine protei 98.5 1.1E-06 3.7E-11 89.6 13.6 101 314-435 12-112 (477)
81 3f9x_A Histone-lysine N-methyl 98.5 4.9E-08 1.7E-12 84.8 2.8 39 219-257 108-150 (166)
82 1kt0_A FKBP51, 51 kDa FK506-bi 98.5 2.9E-06 1E-10 85.9 16.1 107 307-421 267-380 (457)
83 2yhc_A BAMD, UPF0169 lipoprote 98.4 2.8E-06 9.7E-11 77.0 14.0 119 310-443 6-142 (225)
84 3hna_A Histone-lysine N-methyl 98.4 2.1E-07 7.1E-12 87.7 6.0 58 219-276 217-286 (287)
85 2c2l_A CHIP, carboxy terminus 98.4 7.9E-06 2.7E-10 77.0 16.9 98 310-423 6-103 (281)
86 3bo5_A Histone-lysine N-methyl 98.4 1.2E-07 4E-12 89.6 3.6 62 218-279 205-286 (290)
87 1fch_A Peroxisomal targeting s 98.4 5.2E-06 1.8E-10 80.3 15.3 121 312-448 221-344 (368)
88 1ml9_A Histone H3 methyltransf 98.4 1.1E-07 3.7E-12 90.6 2.9 60 218-277 220-300 (302)
89 2r3a_A Histone-lysine N-methyl 98.4 2.3E-07 7.9E-12 87.9 5.1 41 218-258 215-263 (300)
90 1hz4_A MALT regulatory protein 98.4 1.4E-05 4.7E-10 77.9 18.0 125 314-444 20-145 (373)
91 3vtx_A MAMA; tetratricopeptide 98.4 5.2E-06 1.8E-10 72.1 13.1 91 315-421 80-170 (184)
92 2pl2_A Hypothetical conserved 98.3 2.5E-06 8.6E-11 77.0 11.0 96 311-422 42-148 (217)
93 2pl2_A Hypothetical conserved 98.3 3E-06 1E-10 76.4 11.3 94 312-421 9-113 (217)
94 3uq3_A Heat shock protein STI1 98.3 1.2E-05 4.2E-10 73.1 15.5 104 308-421 5-108 (258)
95 2f69_A Histone-lysine N-methyl 98.3 1.9E-07 6.6E-12 86.6 2.6 40 218-257 186-230 (261)
96 1mvh_A Cryptic LOCI regulator 98.3 1.8E-07 6E-12 88.8 2.3 40 218-257 213-260 (299)
97 3uq3_A Heat shock protein STI1 98.3 2E-05 7E-10 71.6 16.1 114 312-443 143-256 (258)
98 4i17_A Hypothetical protein; T 98.3 2.5E-05 8.5E-10 70.4 16.4 97 310-421 9-105 (228)
99 4gco_A Protein STI-1; structur 98.3 3.6E-06 1.2E-10 69.1 9.7 84 345-444 8-91 (126)
100 1fch_A Peroxisomal targeting s 98.3 4.3E-06 1.5E-10 80.8 11.8 111 311-429 254-367 (368)
101 4i17_A Hypothetical protein; T 98.3 8.4E-06 2.9E-10 73.5 13.1 112 311-440 79-223 (228)
102 3ieg_A DNAJ homolog subfamily 98.3 1.6E-05 5.6E-10 75.9 15.8 115 308-440 234-349 (359)
103 2e2e_A Formate-dependent nitri 98.3 1.7E-05 5.9E-10 68.4 14.5 115 310-445 46-163 (177)
104 2kck_A TPR repeat; tetratricop 98.3 4.4E-06 1.5E-10 65.4 9.8 93 314-420 12-105 (112)
105 3smt_A Histone-lysine N-methyl 98.3 5.6E-07 1.9E-11 91.6 5.5 91 183-273 237-332 (497)
106 2ho1_A Type 4 fimbrial biogene 98.3 1.1E-05 3.8E-10 73.5 13.6 91 317-421 80-170 (252)
107 2if4_A ATFKBP42; FKBP-like, al 98.3 4.8E-06 1.6E-10 80.8 11.5 122 306-440 177-307 (338)
108 1h3i_A Histone H3 lysine 4 spe 98.3 2.1E-07 7E-12 88.6 1.6 40 218-257 240-284 (293)
109 4eqf_A PEX5-related protein; a 98.3 1.3E-05 4.6E-10 77.5 14.7 93 315-421 184-276 (365)
110 1hh8_A P67PHOX, NCF-2, neutrop 98.2 9.4E-06 3.2E-10 72.1 12.4 104 311-422 40-151 (213)
111 1hh8_A P67PHOX, NCF-2, neutrop 98.2 1.6E-05 5.3E-10 70.7 13.8 94 310-422 8-101 (213)
112 2ho1_A Type 4 fimbrial biogene 98.2 1.8E-05 6.2E-10 72.1 14.3 94 313-420 110-203 (252)
113 2qpw_A PR domain zinc finger p 98.2 5.9E-07 2E-11 75.9 3.6 39 219-257 100-141 (149)
114 2vq2_A PILW, putative fimbrial 98.2 2.9E-05 9.9E-10 68.9 15.0 112 313-446 47-159 (225)
115 3as5_A MAMA; tetratricopeptide 98.2 2.9E-05 9.8E-10 66.5 14.4 92 314-421 48-139 (186)
116 2fo7_A Synthetic consensus TPR 98.2 2.5E-05 8.6E-10 62.8 13.1 92 314-421 7-98 (136)
117 1xnf_A Lipoprotein NLPI; TPR, 98.2 1.6E-05 5.5E-10 73.2 13.4 101 310-431 45-145 (275)
118 2vq2_A PILW, putative fimbrial 98.2 3.5E-05 1.2E-09 68.4 14.9 95 313-421 81-176 (225)
119 2kat_A Uncharacterized protein 98.2 2.5E-05 8.6E-10 62.3 12.5 102 326-445 3-104 (115)
120 2yhc_A BAMD, UPF0169 lipoprote 98.2 2.8E-05 9.7E-10 70.2 14.2 122 311-447 44-197 (225)
121 3u4t_A TPR repeat-containing p 98.1 1.8E-05 6.2E-10 72.9 12.5 97 312-421 7-103 (272)
122 3hym_B Cell division cycle pro 98.1 2.6E-05 9E-10 73.7 13.5 107 314-433 165-272 (330)
123 2y4t_A DNAJ homolog subfamily 98.1 6E-05 2E-09 74.9 16.7 112 310-439 259-371 (450)
124 3qxy_A N-lysine methyltransfer 98.1 2.5E-06 8.5E-11 85.9 6.2 86 184-269 184-277 (449)
125 2vsy_A XCC0866; transferase, g 98.1 2.1E-05 7.1E-10 81.7 13.3 95 311-421 26-120 (568)
126 2fo7_A Synthetic consensus TPR 98.1 4.7E-05 1.6E-09 61.2 12.8 93 313-421 40-132 (136)
127 3urz_A Uncharacterized protein 98.1 3.6E-05 1.2E-09 68.7 13.1 115 314-447 60-206 (208)
128 4abn_A Tetratricopeptide repea 98.1 2.7E-05 9.2E-10 79.1 13.4 94 322-433 193-294 (474)
129 3vtx_A MAMA; tetratricopeptide 98.1 6.3E-05 2.2E-09 65.1 14.1 99 314-421 11-136 (184)
130 1na3_A Designed protein CTPR2; 98.1 4.2E-05 1.5E-09 57.6 11.4 81 348-444 7-87 (91)
131 3ma5_A Tetratricopeptide repea 98.1 1.2E-05 4.2E-10 62.8 8.3 71 347-425 4-74 (100)
132 3cv0_A Peroxisome targeting si 98.1 6.5E-05 2.2E-09 70.8 15.1 117 312-444 176-296 (327)
133 2q7f_A YRRB protein; TPR, prot 98.1 3.6E-05 1.2E-09 69.4 12.6 109 313-442 130-238 (243)
134 3as5_A MAMA; tetratricopeptide 98.1 3.6E-05 1.2E-09 65.8 12.0 94 312-421 12-105 (186)
135 2q7f_A YRRB protein; TPR, prot 98.1 6.4E-05 2.2E-09 67.7 14.2 91 315-421 98-188 (243)
136 1xnf_A Lipoprotein NLPI; TPR, 98.1 1.5E-05 5E-10 73.5 9.9 91 319-421 16-106 (275)
137 3ieg_A DNAJ homolog subfamily 98.1 5.3E-05 1.8E-09 72.3 14.1 98 308-421 3-100 (359)
138 3qou_A Protein YBBN; thioredox 98.0 8.4E-05 2.9E-09 70.0 15.0 103 310-421 119-248 (287)
139 4abn_A Tetratricopeptide repea 98.0 2.3E-05 7.9E-10 79.6 11.9 94 311-421 105-208 (474)
140 2l6j_A TPR repeat-containing p 98.0 3.3E-05 1.1E-09 60.6 10.3 91 350-453 4-97 (111)
141 3u4t_A TPR repeat-containing p 98.0 1.2E-05 4.2E-10 74.1 8.8 97 312-421 41-137 (272)
142 1zu2_A Mitochondrial import re 98.0 3.1E-05 1.1E-09 65.9 10.2 97 323-440 17-134 (158)
143 3mkr_A Coatomer subunit epsilo 98.0 5.6E-05 1.9E-09 71.5 13.3 109 320-449 178-287 (291)
144 1w3b_A UDP-N-acetylglucosamine 98.0 2.8E-05 9.5E-10 76.0 11.5 107 314-444 277-383 (388)
145 3hym_B Cell division cycle pro 98.0 1.8E-05 6.3E-10 74.8 9.8 110 312-434 197-307 (330)
146 3cv0_A Peroxisome targeting si 98.0 3.6E-05 1.2E-09 72.6 11.8 113 311-431 209-325 (327)
147 4b4t_Q 26S proteasome regulato 98.0 7.2E-05 2.5E-09 74.1 13.8 78 346-425 131-208 (434)
148 4b4t_Q 26S proteasome regulato 98.0 0.00017 5.9E-09 71.3 16.5 117 313-432 140-256 (434)
149 1w3b_A UDP-N-acetylglucosamine 98.0 4.5E-05 1.5E-09 74.5 11.9 91 315-421 142-232 (388)
150 2xpi_A Anaphase-promoting comp 97.9 0.00014 4.9E-09 75.1 15.7 109 312-435 479-588 (597)
151 2hr2_A Hypothetical protein; a 97.9 7.4E-05 2.5E-09 63.7 11.0 96 349-446 10-114 (159)
152 2l6j_A TPR repeat-containing p 97.9 1.1E-05 3.7E-10 63.4 5.5 96 309-416 5-102 (111)
153 3gyz_A Chaperone protein IPGC; 97.9 3.3E-05 1.1E-09 65.6 8.8 76 345-433 31-106 (151)
154 2y4t_A DNAJ homolog subfamily 97.9 0.0002 6.9E-09 71.0 16.1 97 308-420 26-122 (450)
155 3rkv_A Putative peptidylprolyl 97.9 4.4E-05 1.5E-09 64.9 9.4 74 348-421 9-92 (162)
156 3upv_A Heat shock protein STI1 97.9 6.1E-05 2.1E-09 60.9 9.9 65 349-421 3-67 (126)
157 2gw1_A Mitochondrial precursor 97.9 9.7E-05 3.3E-09 74.5 13.5 98 307-421 5-102 (514)
158 2xev_A YBGF; tetratricopeptide 97.9 6.8E-05 2.3E-09 60.5 10.0 84 352-445 4-87 (129)
159 2h6f_A Protein farnesyltransfe 97.9 0.00011 3.8E-09 72.4 13.3 88 318-421 107-195 (382)
160 2r5s_A Uncharacterized protein 97.9 2.7E-05 9.4E-10 67.4 7.7 103 311-421 9-137 (176)
161 1a17_A Serine/threonine protei 97.9 0.00026 8.8E-09 59.5 13.5 100 311-424 50-149 (166)
162 1wao_1 Serine/threonine protei 97.9 5.8E-06 2E-10 84.2 3.3 108 310-433 42-162 (477)
163 3sz7_A HSC70 cochaperone (SGT) 97.8 9.2E-05 3.1E-09 63.0 10.2 68 346-421 7-74 (164)
164 1elr_A TPR2A-domain of HOP; HO 97.8 0.00015 5.2E-09 58.0 11.1 88 349-445 3-90 (131)
165 2xpi_A Anaphase-promoting comp 97.8 0.00032 1.1E-08 72.4 16.1 106 314-434 447-553 (597)
166 2e2e_A Formate-dependent nitri 97.8 6.6E-05 2.3E-09 64.7 8.6 88 318-421 20-110 (177)
167 3mkr_A Coatomer subunit epsilo 97.8 0.00023 7.9E-09 67.2 12.9 101 314-433 136-236 (291)
168 2vsy_A XCC0866; transferase, g 97.7 0.00026 8.8E-09 73.4 13.6 96 311-422 60-158 (568)
169 2pzi_A Probable serine/threoni 97.7 6.6E-05 2.2E-09 79.9 9.2 94 311-421 436-529 (681)
170 2h6f_A Protein farnesyltransfe 97.7 0.00012 4E-09 72.3 10.2 93 313-421 136-229 (382)
171 2lni_A Stress-induced-phosphop 97.7 0.00015 5.1E-09 58.4 8.9 71 343-421 9-79 (133)
172 1na3_A Designed protein CTPR2; 97.7 0.00049 1.7E-08 51.5 11.3 80 311-406 12-91 (91)
173 1p5q_A FKBP52, FK506-binding p 97.7 0.00044 1.5E-08 66.7 13.7 103 308-426 196-299 (336)
174 3q49_B STIP1 homology and U bo 97.7 0.00019 6.6E-09 58.5 9.5 67 347-421 6-72 (137)
175 2pzi_A Probable serine/threoni 97.7 0.00011 3.7E-09 78.2 9.9 95 319-421 402-496 (681)
176 2vgx_A Chaperone SYCD; alterna 97.7 0.0002 6.9E-09 60.2 9.6 75 346-433 17-91 (148)
177 2dba_A Smooth muscle cell asso 97.7 0.00035 1.2E-08 57.4 10.7 71 346-421 24-94 (148)
178 3fp2_A TPR repeat-containing p 97.6 0.0011 3.9E-08 67.1 16.7 99 311-425 313-411 (537)
179 2gw1_A Mitochondrial precursor 97.6 0.00087 3E-08 67.4 15.6 114 312-440 376-492 (514)
180 3fp2_A TPR repeat-containing p 97.6 0.00043 1.5E-08 70.3 13.3 94 307-416 24-117 (537)
181 1ouv_A Conserved hypothetical 97.6 0.00061 2.1E-08 62.9 12.9 89 313-421 43-143 (273)
182 2xcb_A PCRH, regulatory protei 97.6 0.00057 1.9E-08 56.6 11.3 75 346-433 14-88 (142)
183 2v5f_A Prolyl 4-hydroxylase su 97.6 0.0016 5.5E-08 51.0 13.1 78 351-434 6-83 (104)
184 1hxi_A PEX5, peroxisome target 97.6 0.00054 1.8E-08 55.3 10.2 69 352-433 19-87 (121)
185 2vyi_A SGTA protein; chaperone 97.5 0.00055 1.9E-08 54.5 9.9 67 347-421 9-75 (131)
186 1na0_A Designed protein CTPR3; 97.5 0.00062 2.1E-08 53.7 9.9 64 350-421 9-72 (125)
187 2kck_A TPR repeat; tetratricop 97.5 5.7E-05 2E-09 58.8 3.5 63 351-421 7-69 (112)
188 2kc7_A BFR218_protein; tetratr 97.5 0.00041 1.4E-08 53.2 8.2 67 354-433 4-71 (99)
189 1elw_A TPR1-domain of HOP; HOP 97.5 0.00087 3E-08 52.3 10.3 65 349-421 3-67 (118)
190 2h21_A Ribulose-1,5 bisphospha 97.4 0.00015 5.1E-09 72.9 6.7 84 183-270 158-257 (440)
191 2r5s_A Uncharacterized protein 97.4 0.00067 2.3E-08 58.4 9.7 68 349-422 107-174 (176)
192 3k9i_A BH0479 protein; putativ 97.4 0.00022 7.4E-09 57.0 5.4 62 362-433 2-63 (117)
193 4f3v_A ESX-1 secretion system 97.3 0.0014 4.7E-08 61.4 11.4 87 317-419 111-198 (282)
194 4f3v_A ESX-1 secretion system 97.3 0.0025 8.5E-08 59.6 13.2 93 316-421 143-237 (282)
195 2fbn_A 70 kDa peptidylprolyl i 97.3 0.00087 3E-08 58.8 9.6 71 349-421 37-117 (198)
196 1ouv_A Conserved hypothetical 97.3 0.0019 6.6E-08 59.5 12.3 89 313-421 79-179 (273)
197 1ihg_A Cyclophilin 40; ppiase 97.3 0.00054 1.9E-08 67.1 8.8 72 350-421 223-302 (370)
198 2c2l_A CHIP, carboxy terminus 97.3 0.00041 1.4E-08 65.0 7.5 64 350-421 4-67 (281)
199 2kc7_A BFR218_protein; tetratr 97.2 0.0011 3.7E-08 50.7 8.1 85 313-421 5-90 (99)
200 3qou_A Protein YBBN; thioredox 97.2 0.0018 6.2E-08 60.7 10.5 68 347-422 216-285 (287)
201 1kt0_A FKBP51, 51 kDa FK506-bi 97.1 0.0015 5E-08 65.9 9.4 75 347-421 265-346 (457)
202 3ma5_A Tetratricopeptide repea 97.0 0.0037 1.2E-07 48.3 9.1 62 312-381 11-72 (100)
203 2ond_A Cleavage stimulation fa 96.9 0.0035 1.2E-07 59.2 9.4 83 325-421 81-163 (308)
204 3rjv_A Putative SEL1 repeat pr 96.9 0.0035 1.2E-07 55.7 8.9 65 351-421 86-158 (212)
205 2v5f_A Prolyl 4-hydroxylase su 96.8 0.034 1.1E-06 43.2 13.0 79 312-399 9-87 (104)
206 2ond_A Cleavage stimulation fa 96.8 0.0099 3.4E-07 56.0 11.8 95 320-421 111-232 (308)
207 3ffl_A Anaphase-promoting comp 96.8 0.034 1.2E-06 47.1 13.4 101 313-416 25-146 (167)
208 3rjv_A Putative SEL1 repeat pr 96.7 0.013 4.4E-07 52.0 11.7 84 321-421 102-197 (212)
209 3db5_A PR domain zinc finger p 96.7 0.00098 3.4E-08 56.3 3.3 39 218-256 97-138 (151)
210 1pc2_A Mitochondria fission pr 96.6 0.046 1.6E-06 45.8 13.2 84 348-443 30-117 (152)
211 1klx_A Cysteine rich protein B 96.6 0.019 6.5E-07 47.2 10.9 87 315-421 32-126 (138)
212 3bee_A Putative YFRE protein; 96.6 0.016 5.5E-07 44.3 9.6 83 350-445 6-91 (93)
213 2if4_A ATFKBP42; FKBP-like, al 96.5 0.0042 1.4E-07 59.8 7.1 96 310-421 232-328 (338)
214 3ep0_A PR domain zinc finger p 96.5 0.0015 5.2E-08 56.0 3.3 38 219-256 102-142 (170)
215 2kat_A Uncharacterized protein 96.5 0.021 7E-07 44.8 9.9 63 311-381 22-84 (115)
216 3dal_A PR domain zinc finger p 96.0 0.0034 1.2E-07 55.0 3.3 39 219-257 132-173 (196)
217 2ff4_A Probable regulatory pro 95.8 0.096 3.3E-06 51.3 13.1 122 310-439 117-253 (388)
218 3txn_A 26S proteasome regulato 95.8 0.25 8.6E-06 48.2 15.8 107 313-423 104-212 (394)
219 1xi4_A Clathrin heavy chain; a 95.8 0.065 2.2E-06 60.2 12.7 109 318-451 1115-1245(1630)
220 3ihx_A PR domain zinc finger p 95.7 0.0051 1.7E-07 51.8 2.9 39 219-257 97-138 (152)
221 2xm6_A Protein corresponding t 95.6 0.1 3.5E-06 52.4 12.7 80 321-420 128-215 (490)
222 2yqq_A Zinc finger HIT domain- 95.6 0.0086 2.9E-07 40.7 3.1 37 27-69 12-48 (56)
223 2ooe_A Cleavage stimulation fa 95.5 0.12 4.2E-06 52.4 12.9 54 318-378 331-384 (530)
224 2xm6_A Protein corresponding t 95.4 0.13 4.5E-06 51.6 12.9 79 321-419 56-142 (490)
225 2ooe_A Cleavage stimulation fa 95.4 0.068 2.3E-06 54.3 10.5 86 321-420 292-384 (530)
226 3bee_A Putative YFRE protein; 95.3 0.2 6.8E-06 38.0 10.5 65 324-401 25-89 (93)
227 1zu2_A Mitochondrial import re 95.1 0.032 1.1E-06 47.2 5.9 48 324-379 62-120 (158)
228 1x4s_A Protein FON, zinc finge 95.1 0.0067 2.3E-07 41.5 1.3 36 27-68 11-49 (59)
229 1klx_A Cysteine rich protein B 95.1 0.084 2.9E-06 43.2 8.4 76 323-420 10-89 (138)
230 3mv2_B Coatomer subunit epsilo 95.1 0.4 1.4E-05 45.2 14.0 111 323-449 193-305 (310)
231 1xi4_A Clathrin heavy chain; a 94.9 0.076 2.6E-06 59.7 9.7 95 311-421 1198-1309(1630)
232 1b89_A Protein (clathrin heavy 94.9 0.041 1.4E-06 54.6 6.8 83 314-421 154-236 (449)
233 3ray_A PR domain-containing pr 94.8 0.017 5.9E-07 51.8 3.6 39 219-257 141-182 (237)
234 2o8p_A 14-3-3 domain containin 94.8 0.44 1.5E-05 42.4 12.4 97 328-424 98-200 (227)
235 3u64_A Protein TP_0956; tetrat 94.5 0.2 6.8E-06 46.6 10.0 86 325-424 180-272 (301)
236 3ffl_A Anaphase-promoting comp 94.2 0.47 1.6E-05 40.1 10.8 99 355-453 25-141 (167)
237 3e4b_A ALGK; tetratricopeptide 93.7 0.23 7.8E-06 49.5 9.5 57 352-419 250-314 (452)
238 1b89_A Protein (clathrin heavy 93.4 0.044 1.5E-06 54.4 3.5 54 352-421 124-177 (449)
239 4b4t_R RPN7, 26S proteasome re 93.2 0.66 2.2E-05 45.9 11.9 101 312-420 135-236 (429)
240 4h7y_A Dual specificity protei 93.2 0.85 2.9E-05 37.9 10.3 87 325-420 36-122 (161)
241 3ly7_A Transcriptional activat 93.2 0.22 7.5E-06 48.1 8.0 66 347-421 274-339 (372)
242 1nzn_A CGI-135 protein, fissio 93.1 1.2 4E-05 35.9 11.0 86 348-442 33-119 (126)
243 1pc2_A Mitochondria fission pr 92.8 0.42 1.4E-05 39.9 8.2 71 309-391 33-107 (152)
244 3e4b_A ALGK; tetratricopeptide 92.6 0.47 1.6E-05 47.2 10.0 80 319-420 262-350 (452)
245 3txn_A 26S proteasome regulato 92.5 6.7 0.00023 38.1 17.6 81 352-436 101-181 (394)
246 4b4t_P 26S proteasome regulato 92.2 2.9 9.8E-05 41.5 15.1 104 316-424 145-250 (445)
247 4g26_A Pentatricopeptide repea 91.5 2.1 7E-05 43.3 13.2 89 318-420 115-203 (501)
248 3mv2_B Coatomer subunit epsilo 91.4 0.55 1.9E-05 44.2 8.2 55 317-377 109-163 (310)
249 3uzd_A 14-3-3 protein gamma; s 91.1 2.1 7.3E-05 38.6 11.3 78 366-445 147-228 (248)
250 1o9d_A 14-3-3-like protein C; 90.3 6.5 0.00022 35.7 13.9 55 367-421 152-207 (260)
251 2br9_A 14-3-3E, 14-3-3 protein 89.8 11 0.00036 33.8 14.9 58 367-424 147-205 (234)
252 1dce_A Protein (RAB geranylger 89.0 4 0.00014 41.8 13.0 87 320-422 40-139 (567)
253 3efz_A 14-3-3 protein; 14-3-3, 89.0 6 0.00021 35.9 12.5 95 327-421 117-226 (268)
254 3ubw_A 14-3-3E, 14-3-3 protein 88.8 3.5 0.00012 37.3 10.8 78 367-446 173-254 (261)
255 1nzn_A CGI-135 protein, fissio 88.7 3.2 0.00011 33.2 9.4 65 311-379 38-103 (126)
256 3iqu_A 14-3-3 protein sigma; s 88.4 12 0.00042 33.3 13.9 56 366-421 149-205 (236)
257 1ya0_A SMG-7 transcript varian 88.2 2.2 7.4E-05 43.0 10.1 63 350-420 152-214 (497)
258 3dra_A Protein farnesyltransfe 87.7 3.3 0.00011 38.8 10.5 86 321-422 45-140 (306)
259 1y8m_A FIS1; mitochondria, unk 87.4 11 0.00036 30.9 12.4 82 347-441 36-121 (144)
260 2npm_A 14-3-3 domain containin 87.4 5.4 0.00019 36.2 11.1 57 367-424 173-230 (260)
261 3mkq_A Coatomer beta'-subunit; 87.0 4 0.00014 43.1 12.1 91 351-442 682-791 (814)
262 3u64_A Protein TP_0956; tetrat 86.9 10 0.00034 35.2 12.9 76 342-423 144-235 (301)
263 3o48_A Mitochondria fission 1 86.2 4.5 0.00015 32.7 8.8 81 349-442 39-123 (134)
264 2wpv_A GET4, UPF0363 protein Y 85.6 19 0.00065 33.6 14.3 21 395-415 137-157 (312)
265 4g26_A Pentatricopeptide repea 85.5 8.2 0.00028 38.8 12.8 82 324-419 86-167 (501)
266 1dce_A Protein (RAB geranylger 85.2 3.3 0.00011 42.4 9.8 86 320-421 119-221 (567)
267 2o8p_A 14-3-3 domain containin 84.2 3.3 0.00011 36.7 7.8 62 320-381 137-199 (227)
268 2v6y_A AAA family ATPase, P60 84.0 8.8 0.0003 28.1 9.1 59 391-449 10-70 (83)
269 2w2u_A Hypothetical P60 katani 82.6 12 0.0004 27.5 9.1 59 391-449 18-78 (83)
270 1y8m_A FIS1; mitochondria, unk 82.2 5.6 0.00019 32.5 7.9 78 295-379 16-106 (144)
271 4b4t_S RPN3, 26S proteasome re 81.9 4.2 0.00014 40.9 8.5 76 339-420 220-298 (523)
272 3o48_A Mitochondria fission 1 81.7 5.7 0.00019 32.1 7.7 77 295-378 17-106 (134)
273 2br9_A 14-3-3E, 14-3-3 protein 81.5 4.4 0.00015 36.2 7.7 55 325-379 147-202 (234)
274 3lpz_A GET4 (YOR164C homolog); 81.2 37 0.0013 32.0 14.7 19 397-415 141-159 (336)
275 2ff4_A Probable regulatory pro 81.1 11 0.00039 36.3 11.3 79 311-397 174-253 (388)
276 1lv3_A Hypothetical protein YA 80.5 0.57 1.9E-05 33.0 1.2 13 47-59 27-39 (68)
277 3iqu_A 14-3-3 protein sigma; s 80.5 5 0.00017 35.8 7.7 55 325-379 150-205 (236)
278 3spa_A Mtrpol, DNA-directed RN 80.2 15 0.00053 40.1 12.6 93 316-419 135-228 (1134)
279 1wfd_A Hypothetical protein 15 79.5 8.5 0.00029 28.9 7.7 35 308-342 15-49 (93)
280 3ly7_A Transcriptional activat 79.1 8.8 0.0003 36.9 9.5 90 323-422 214-307 (372)
281 3uzd_A 14-3-3 protein gamma; s 79.0 5.9 0.0002 35.6 7.7 55 325-379 148-203 (248)
282 3ubw_A 14-3-3E, 14-3-3 protein 78.9 6 0.0002 35.8 7.7 55 325-379 173-228 (261)
283 1o9d_A 14-3-3-like protein C; 77.6 6.8 0.00023 35.6 7.7 55 325-379 152-207 (260)
284 4e6h_A MRNA 3'-END-processing 76.9 14 0.00048 38.7 11.1 95 319-421 354-463 (679)
285 2npm_A 14-3-3 domain containin 75.6 7.2 0.00025 35.4 7.3 54 325-379 173-227 (260)
286 3dss_A Geranylgeranyl transfer 75.5 36 0.0012 32.0 12.6 99 310-421 31-139 (331)
287 3q7a_A Farnesyltransferase alp 74.2 17 0.00059 34.5 10.1 83 322-420 68-153 (349)
288 3dra_A Protein farnesyltransfe 73.5 19 0.00064 33.5 10.0 91 318-421 77-175 (306)
289 3efz_A 14-3-3 protein; 14-3-3, 73.2 8 0.00027 35.1 6.9 55 325-379 169-226 (268)
290 3mkq_B Coatomer subunit alpha; 73.0 18 0.00062 30.7 8.8 98 319-429 16-131 (177)
291 4e6h_A MRNA 3'-END-processing 72.0 18 0.00063 37.8 10.5 97 318-421 388-499 (679)
292 4gq4_A Menin; tumor suppressor 70.5 73 0.0025 30.9 13.0 60 368-430 282-342 (489)
293 4gns_B Protein CSD3, chitin bi 69.8 20 0.0007 37.8 10.2 59 351-417 338-396 (754)
294 4b4t_O 26S proteasome regulato 69.5 66 0.0023 30.9 13.3 100 321-420 89-197 (393)
295 1wfd_A Hypothetical protein 15 68.9 32 0.0011 25.7 8.5 37 390-426 13-49 (93)
296 1pft_A TFIIB, PFTFIIBN; N-term 67.9 2.8 9.6E-05 27.4 2.1 28 270-297 7-35 (50)
297 3o10_A Sacsin; all-helical dom 67.8 24 0.00083 28.6 8.3 43 295-337 3-45 (141)
298 1zbp_A Hypothetical protein VP 67.7 43 0.0015 30.5 10.5 52 317-376 6-57 (273)
299 4b4t_P 26S proteasome regulato 67.6 46 0.0016 32.6 11.9 81 349-434 136-217 (445)
300 1vq8_Z 50S ribosomal protein L 66.5 1.2 4.1E-05 32.9 0.0 28 266-295 27-54 (83)
301 3re2_A Predicted protein; meni 65.7 45 0.0015 31.7 10.3 71 368-444 275-346 (472)
302 2v6x_A Vacuolar protein sortin 64.6 38 0.0013 24.6 8.3 37 389-425 10-46 (85)
303 4b4t_R RPN7, 26S proteasome re 63.3 24 0.00083 34.5 8.8 78 349-434 130-207 (429)
304 4b4t_O 26S proteasome regulato 63.0 93 0.0032 29.8 12.9 76 357-432 83-167 (393)
305 2w2u_A Hypothetical P60 katani 62.3 19 0.00066 26.3 5.9 36 306-341 17-52 (83)
306 3dss_A Geranylgeranyl transfer 61.9 25 0.00084 33.2 8.2 82 323-420 125-221 (331)
307 3j20_Y 30S ribosomal protein S 61.5 2.8 9.7E-05 27.6 1.1 25 271-295 22-46 (50)
308 2d2s_A Exocyst complex compone 61.0 89 0.003 27.7 18.1 134 300-442 10-177 (235)
309 3u84_A Menin; MLL, JUND, ledgf 60.9 1.2E+02 0.0042 29.3 12.4 55 368-425 297-351 (550)
310 4gns_B Protein CSD3, chitin bi 60.7 15 0.00052 38.8 7.1 53 314-374 343-395 (754)
311 4a5x_A MITD1, MIT domain-conta 59.9 48 0.0017 24.3 8.2 46 391-436 15-61 (86)
312 3t5v_B Nuclear mRNA export pro 58.5 88 0.003 30.8 11.8 73 348-422 174-250 (455)
313 2cpt_A SKD1 protein, vacuolar 58.5 47 0.0016 26.0 8.0 35 308-342 18-52 (117)
314 2cpt_A SKD1 protein, vacuolar 58.1 46 0.0016 26.0 7.9 37 390-426 16-52 (117)
315 3spa_A Mtrpol, DNA-directed RN 57.8 64 0.0022 35.4 11.3 70 346-419 123-192 (1134)
316 3j21_g 50S ribosomal protein L 57.3 4.4 0.00015 26.7 1.5 21 271-295 17-37 (51)
317 4a5x_A MITD1, MIT domain-conta 57.1 55 0.0019 24.0 7.8 35 308-342 16-50 (86)
318 2v6y_A AAA family ATPase, P60 56.3 24 0.00082 25.7 5.6 36 306-341 9-44 (83)
319 3mkq_B Coatomer subunit alpha; 54.6 22 0.00075 30.2 5.8 52 357-421 12-63 (177)
320 2rpa_A Katanin P60 ATPase-cont 53.5 32 0.0011 24.8 5.7 52 394-448 14-66 (78)
321 1vh6_A Flagellar protein FLIS; 52.6 54 0.0018 26.7 7.7 85 300-385 25-122 (145)
322 3jyw_9 60S ribosomal protein L 50.6 11 0.00037 26.8 2.7 30 265-296 25-54 (72)
323 1wy6_A Hypothetical protein ST 49.9 49 0.0017 27.0 6.7 41 379-420 113-153 (172)
324 1om2_A Protein (mitochondrial 49.3 47 0.0016 24.9 6.2 52 396-449 24-85 (95)
325 2crb_A Nuclear receptor bindin 48.8 41 0.0014 25.0 5.6 39 391-429 14-52 (97)
326 1gh9_A 8.3 kDa protein (gene M 48.1 2.2 7.5E-05 30.4 -1.3 26 271-298 7-32 (71)
327 3mkq_A Coatomer beta'-subunit; 48.0 87 0.003 32.6 10.7 20 315-334 688-707 (814)
328 3kae_A CDC27, possible protein 47.9 1.1E+02 0.0036 26.0 8.6 68 353-420 65-142 (242)
329 3mv2_A Coatomer subunit alpha; 46.3 1.9E+02 0.0064 27.0 11.5 105 343-447 20-169 (325)
330 2k4x_A 30S ribosomal protein S 46.3 8.6 0.00029 25.8 1.5 25 271-295 21-45 (55)
331 1dl6_A Transcription factor II 45.9 9.8 0.00034 25.8 1.8 27 271-297 14-41 (58)
332 3iqc_A FLIS, flagellar protein 44.7 1.2E+02 0.004 24.2 11.2 90 297-386 24-128 (131)
333 1wfp_A Zinc finger (AN1-like) 43.6 17 0.00059 25.8 2.8 28 24-53 22-51 (74)
334 3q7a_A Farnesyltransferase alp 43.4 77 0.0026 30.0 8.4 85 321-421 101-196 (349)
335 2pk7_A Uncharacterized protein 42.9 13 0.00044 26.2 2.1 25 271-295 11-35 (69)
336 4fhn_B Nucleoporin NUP120; pro 42.7 66 0.0023 35.8 9.0 98 314-415 848-961 (1139)
337 2v6x_A Vacuolar protein sortin 42.6 93 0.0032 22.4 7.6 34 308-341 13-46 (85)
338 2a9u_A Ubiquitin carboxyl-term 42.3 1.4E+02 0.0047 24.3 9.7 71 350-426 42-115 (144)
339 2a9u_A Ubiquitin carboxyl-term 41.3 1.4E+02 0.0048 24.2 8.8 44 390-435 40-83 (144)
340 1orj_A Flagellar protein FLIS; 40.9 1.3E+02 0.0044 23.9 8.1 89 297-385 17-122 (130)
341 2jny_A Uncharacterized BCR; st 39.9 13 0.00045 26.0 1.7 25 271-295 13-37 (67)
342 2hf1_A Tetraacyldisaccharide-1 39.8 13 0.00045 26.1 1.7 26 270-295 10-35 (68)
343 1wfh_A Zinc finger (AN1-like) 39.4 20 0.0007 24.7 2.6 27 25-53 13-41 (64)
344 2fnf_X Putative RAS effector N 39.2 19 0.00065 25.5 2.6 32 25-58 33-66 (72)
345 2yuu_A NPKC-delta, protein kin 39.0 20 0.00069 26.1 2.8 42 15-58 16-62 (83)
346 2js4_A UPF0434 protein BB2007; 38.2 13 0.00045 26.2 1.5 25 271-295 11-35 (70)
347 2jr6_A UPF0434 protein NMA0874 38.2 14 0.00047 26.0 1.6 25 271-295 11-35 (68)
348 3ga8_A HTH-type transcriptiona 37.6 39 0.0013 24.1 4.1 29 285-313 35-64 (78)
349 2con_A RUH-035 protein, NIN on 37.1 15 0.00051 26.6 1.7 21 27-47 15-38 (79)
350 3mkr_B Coatomer subunit alpha; 36.6 2.2E+02 0.0077 26.4 10.1 92 356-447 22-157 (320)
351 1vdy_A Hypothetical protein (R 36.3 51 0.0018 26.7 5.0 73 369-441 6-93 (140)
352 1wg2_A Zinc finger (AN1-like) 35.9 21 0.00072 24.6 2.2 26 26-53 14-41 (64)
353 4a1g_A Mitotic checkpoint seri 35.2 1.8E+02 0.0063 23.7 9.8 46 376-421 84-130 (152)
354 3uej_A NPKC-delta, protein kin 35.1 21 0.0007 24.6 2.2 32 25-58 18-54 (65)
355 2crb_A Nuclear receptor bindin 34.6 1.4E+02 0.0048 22.2 6.7 37 349-385 14-50 (97)
356 3myv_A SUSD superfamily protei 34.1 71 0.0024 31.3 6.8 34 346-379 186-219 (454)
357 2rpa_A Katanin P60 ATPase-cont 33.7 36 0.0012 24.5 3.3 37 355-391 17-54 (78)
358 2cwy_A Hypothetical protein TT 33.0 55 0.0019 24.4 4.4 64 358-426 9-73 (94)
359 2vkj_A TM1634; membrane protei 32.7 78 0.0027 23.3 4.9 32 306-337 51-82 (106)
360 2l8e_A Polyhomeotic-like prote 32.7 18 0.00061 23.6 1.4 29 28-58 19-47 (49)
361 2ra1_A Surface layer protein; 32.3 3.4E+02 0.012 25.9 10.6 81 361-444 114-222 (412)
362 4a17_Y RPL37A, 60S ribosomal p 32.3 27 0.00091 26.6 2.4 29 265-295 35-63 (103)
363 3kez_A Putative sugar binding 32.2 77 0.0026 31.1 6.7 34 346-379 192-225 (461)
364 3j21_i 50S ribosomal protein L 32.1 12 0.00042 27.3 0.6 30 265-296 34-63 (83)
365 2wb7_A PT26-6P; extra chromoso 31.9 2E+02 0.0068 28.5 9.1 40 367-406 449-488 (526)
366 3na7_A HP0958; flagellar bioge 31.0 18 0.00062 32.7 1.7 25 27-51 198-234 (256)
367 3t5x_A PCI domain-containing p 31.0 59 0.002 28.0 5.0 33 389-421 11-43 (203)
368 1wy6_A Hypothetical protein ST 30.0 1.2E+02 0.0042 24.6 6.1 51 319-377 102-152 (172)
369 3iz5_m 60S ribosomal protein L 29.9 15 0.00052 27.4 0.7 29 265-295 35-63 (92)
370 1brv_A Protein G, BRSV-G regio 29.4 19 0.00064 20.9 0.9 21 37-57 11-31 (32)
371 3eab_A Spastin; spastin, MIT, 28.7 1.7E+02 0.0057 21.6 6.2 70 298-381 6-79 (89)
372 2xze_A STAM-binding protein; h 28.5 67 0.0023 26.1 4.6 44 390-434 38-81 (146)
373 1wff_A Riken cDNA 2810002D23 p 28.4 42 0.0014 24.6 2.9 27 25-53 23-52 (85)
374 3ax2_A Mitochondrial import re 28.4 55 0.0019 23.2 3.4 25 396-420 21-45 (73)
375 4h7y_A Dual specificity protei 28.2 84 0.0029 26.0 5.0 49 322-378 74-122 (161)
376 1rfh_A RAS association (ralgds 27.9 43 0.0015 22.5 2.8 32 25-58 20-53 (59)
377 1x4w_A Hypothetical protein FL 27.9 35 0.0012 23.8 2.2 26 26-53 14-44 (67)
378 1ptq_A Protein kinase C delta 27.4 26 0.0009 22.4 1.6 31 26-58 10-45 (50)
379 1faq_A RAF-1; transferase, ser 27.4 20 0.00067 23.3 0.9 31 26-58 13-44 (52)
380 1twf_L ABC10-alpha, DNA-direct 27.2 32 0.0011 24.2 2.0 26 25-50 26-57 (70)
381 3re2_A Predicted protein; meni 26.7 2.5E+02 0.0085 26.7 8.4 72 326-400 275-347 (472)
382 3izc_m 60S ribosomal protein R 26.6 17 0.00059 27.0 0.6 29 265-295 35-63 (92)
383 2enz_A NPKC-theta, protein kin 26.6 44 0.0015 22.9 2.7 38 19-58 15-57 (65)
384 2dl1_A Spartin; SPG20, MIT, st 26.5 2.3E+02 0.0077 22.0 9.3 43 298-340 12-54 (116)
385 4b6d_A RAC GTPase-activating p 26.4 21 0.00071 24.4 0.9 31 26-58 18-52 (61)
386 3h0g_L DNA-directed RNA polyme 26.1 48 0.0016 22.8 2.7 24 24-47 18-46 (63)
387 3cc2_Z 50S ribosomal protein L 25.8 15 0.0005 28.7 0.0 29 265-295 59-87 (116)
388 4ayb_P DNA-directed RNA polyme 25.7 41 0.0014 21.5 2.1 19 29-47 5-31 (48)
389 2row_A RHO-associated protein 25.7 60 0.0021 23.7 3.4 32 24-57 32-70 (84)
390 1qsa_A Protein (soluble lytic 25.2 1.8E+02 0.0062 29.8 8.1 58 355-420 290-347 (618)
391 1ffk_W Ribosomal protein L37AE 24.9 19 0.00063 25.7 0.4 29 266-296 27-55 (73)
392 3mcx_A SUSD superfamily protei 24.9 87 0.003 30.8 5.6 34 346-379 198-231 (477)
393 2uy1_A Cleavage stimulation fa 24.7 3.4E+02 0.012 26.6 10.0 45 365-417 335-379 (493)
394 1wfl_A Zinc finger protein 216 24.7 38 0.0013 24.1 2.0 26 26-53 24-51 (74)
395 4aez_C MAD3, mitotic spindle c 24.6 3.5E+02 0.012 23.6 10.6 97 326-422 70-180 (223)
396 4gq4_A Menin; tumor suppressor 24.3 3.5E+02 0.012 26.2 9.1 72 325-399 281-353 (489)
397 1wvo_A Sialic acid synthase; a 24.0 28 0.00097 25.1 1.3 19 240-258 8-26 (79)
398 4fhn_B Nucleoporin NUP120; pro 23.9 1.6E+02 0.0055 32.7 8.0 97 353-453 845-957 (1139)
399 2yrc_A Protein transport prote 23.6 29 0.00099 23.5 1.2 26 270-295 11-42 (59)
400 2wm9_A Dedicator of cytokinesi 23.6 4.9E+02 0.017 25.1 10.6 97 350-448 11-142 (428)
401 2xze_A STAM-binding protein; h 23.5 2.9E+02 0.0099 22.2 9.2 46 303-349 35-80 (146)
402 3myv_A SUSD superfamily protei 23.4 1E+02 0.0035 30.1 5.8 36 386-421 184-219 (454)
403 3lrq_A E3 ubiquitin-protein li 23.4 26 0.00089 26.3 1.1 43 27-71 22-65 (100)
404 3ax2_A Mitochondrial import re 23.2 63 0.0022 22.9 3.0 24 355-378 22-45 (73)
405 2uy1_A Cleavage stimulation fa 23.2 5.3E+02 0.018 25.1 12.2 51 362-421 298-349 (493)
406 3snx_A SUSD homolog, putative 23.1 1.3E+02 0.0045 29.4 6.5 34 346-379 187-220 (460)
407 3kez_A Putative sugar binding 23.1 1E+02 0.0035 30.2 5.7 36 386-421 190-225 (461)
408 2rkl_A Vacuolar protein sortin 23.0 1.7E+02 0.0057 19.3 4.9 26 398-423 26-51 (53)
409 3qt1_I DNA-directed RNA polyme 22.8 50 0.0017 26.5 2.7 26 271-296 27-56 (133)
410 3h0g_I DNA-directed RNA polyme 22.7 46 0.0016 25.8 2.4 26 271-296 7-36 (113)
411 1om2_A Protein (mitochondrial 22.6 92 0.0032 23.3 3.9 33 355-387 25-67 (95)
412 1y8f_A UNC-13 homolog A, MUNC1 22.5 27 0.00093 24.0 0.9 32 25-58 22-58 (66)
413 1z60_A TFIIH basal transcripti 21.7 26 0.00089 23.8 0.7 29 27-57 15-46 (59)
414 1jjd_A Metallothionein, SMTA; 21.4 41 0.0014 22.5 1.5 10 49-58 29-38 (55)
415 2wm9_A Dedicator of cytokinesi 21.3 1E+02 0.0035 30.0 5.2 51 352-404 90-140 (428)
416 1kbe_A Kinase suppressor of RA 21.2 20 0.00068 23.3 -0.0 29 27-57 14-43 (49)
417 1l8d_A DNA double-strand break 21.1 2.1E+02 0.0072 21.6 6.1 18 286-303 47-64 (112)
418 2w0t_A Lethal(3)malignant brai 21.1 45 0.0015 21.0 1.6 10 49-58 27-36 (43)
419 3u84_A Menin; MLL, JUND, ledgf 20.9 3.6E+02 0.012 26.1 8.4 72 326-400 297-369 (550)
420 2eli_A Protein kinase C alpha 20.9 46 0.0016 24.2 2.0 32 25-58 26-62 (85)
421 3lew_A SUSD-like carbohydrate 20.8 1.9E+02 0.0064 28.6 7.1 55 324-378 174-231 (495)
422 2das_A Zinc finger MYM-type pr 20.8 46 0.0016 22.5 1.7 33 25-58 18-54 (62)
423 1wcr_A PTS system, N, N'-diace 20.4 1.8E+02 0.0063 22.0 5.3 35 392-426 18-52 (103)
424 2e2a_A Protein (enzyme IIA); h 20.3 1.8E+02 0.0063 22.1 5.3 35 392-426 20-54 (105)
425 2enn_A NPKC-theta, protein kin 20.3 50 0.0017 23.5 2.0 42 15-58 22-68 (77)
426 1y02_A CARP2, FYVE-ring finger 20.1 39 0.0013 26.6 1.4 37 20-58 12-52 (120)
No 1
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=100.00 E-value=3.9e-72 Score=574.18 Aligned_cols=401 Identities=22% Similarity=0.374 Sum_probs=337.1
Q ss_pred CCCCCCCeEEEeCCceeecCCCCCCccCcCcCCC-CCCccCcCCCCcccccHHhhhhcHHHhHHhchhhHhchhhhccCC
Q 012772 3 SFHVSGEVIISQEPYVCVPNNSSSISRCDGCFAS-SNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVLSRLDKEKRKSV 81 (456)
Q Consensus 3 ~~i~~G~vil~e~P~~~~~~~~~~~~~C~~C~~~-~~~~~C~~C~~v~yCs~~C~~~~~~~H~~EC~~l~~l~~~~~~~~ 81 (456)
.+|++||+|+.|+|+++++.......+|++|++. .++.+|++|++++|||++||+.+|++|+.||+.++.+.. .+
T Consensus 25 r~i~~Ge~Il~e~P~~~v~~~~~~~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~w~~Hk~eC~~~~~~~~----~p 100 (490)
T 3n71_A 25 KEFWAADVIFAERAYSAVVFDSLINFVCHTCFKRQEKLHRCGQCKFAHYCDRTCQKDAWLNHKNECAAIKKYGK----VP 100 (490)
T ss_dssp SCBCTTCEEEEECCSEEEECGGGTTTBCTTTCCBCSCCEECTTTSCCEESSHHHHHHHHHHHHHHHHHHHHHTS----CC
T ss_pred cCCCCCCEEEecCCceEEecccccCCcCCCCCCCCCCCCCCCCCCCcCcCCHHHhhhhhhHHHHHhHHHHhcCc----CC
Confidence 4899999999999999998888889999999997 578999999999999999999999999999999998752 45
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCCCCCCcchHHHHHHHhhhHHHHHHhhhcccchhhhcccCCcchhhhhcccCCCCCccc
Q 012772 82 TPSIRLMLKLYLRRKLQNDNVIPSTTTDNYSLVEALVARILFELIIWFNQFGLVLCFSYNKSLMPAFVNNLFGKDMSDID 161 (456)
Q Consensus 82 ~~~~~l~~R~l~~~~~~~~~~~~~~~~~~~~~~~~L~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (456)
+..+|+++|+|++.....+.. ..+.+..+..|++|.+ ++.
T Consensus 101 ~~~~rl~lRiL~~~~~~~~~~----~~~~~~~~~~L~sh~~------------------------------------~~~ 140 (490)
T 3n71_A 101 NENIRLAARIMWRVEREGTGL----TEGCLVSVDDLQNHVE------------------------------------HFG 140 (490)
T ss_dssp CHHHHHHHHHHHHHHHTTSSB----CTTCSSBGGGSCCCGG------------------------------------GCC
T ss_pred CHHHHHHHHHHHHhhccCccC----cchhhhHHHHHHhhhh------------------------------------hcC
Confidence 678999999998765433221 2233555677888832 111
Q ss_pred HHHHHHH-HHHHHHHHHhhc-CCCCCHHHHHHHHhhHhccccccccCC-CCcceeeeccccccccCCCcCCCeeEEeCC-
Q 012772 162 EKQLLLY-AQIANLVNLILQ-WPEISINEIAENFSKLACNAHTICNSE-LRPLGTGLYPVISIINHSCLPNAVLVFEGR- 237 (456)
Q Consensus 162 ~~~~~~~-~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~N~~~i~~~~-~~~~g~glyp~~sl~NHSC~PN~~~~f~~~- 237 (456)
+++...+ ..+..+++.+.. ...++.++|..+++++.+|+|+|.+.+ ...+|.||||.+|+|||||.||+.++|+++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~N~f~i~~~~g~~~~g~gl~p~~s~~NHSC~PN~~~~~~~~~ 220 (490)
T 3n71_A 141 EEEQKELRVDVDTFLQYWPPQSQQFSMQYISHIFGVINCNGFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGN 220 (490)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTSCCCCHHHHHHHHHHHHTTEEEEECTTSCSEEEEEECTTGGGCEECSSCSEEEEEECCC
T ss_pred chHHHHHHHHHHHHHHHccccccCCCHHHHHHHHHHHhccCcccccCCCCccceEEEchhhhhcccCCCCCeeEEecCCc
Confidence 1221111 223444443221 236789999999999999999999876 578999999999999999999999999987
Q ss_pred ------------EEEEEEecCCCCCCccc--CCh------hhHHHhhC--CccccCCCCCCCcccCCCCCCeeeccCCCc
Q 012772 238 ------------LAVVRAVQHVPKGAEGQ--FDD------IQESAILE--GYRCKDDGCSGFLLRDSDDKGFTCQQCGLV 295 (456)
Q Consensus 238 ------------~~~vra~~~I~~Gee~~--~~~------~r~~~l~~--~f~C~C~~C~~~~~~~~~~~~~~C~~C~~~ 295 (456)
+++|+|+|+|++||||| |.+ .||+.|.+ +|.|.|.+|......+ ....+ +++..
T Consensus 221 ~~~~~~~~~~~~~~~v~A~rdI~~GEEltisY~~~~~~~~~R~~~L~~~~~F~C~C~~C~~~~~~~-~~~~~---~~~~~ 296 (490)
T 3n71_A 221 HEAVKSMFHTQMRIELRALGKISEGEELTVSYIDFLHLSEERRRQLKKQYYFDCSCEHCQKGLKDD-LFLAA---KEDPK 296 (490)
T ss_dssp CSSSCCCGGGSCEEEEEESSCBCTTCBCEECSSCSCSCHHHHHHHHHHHHSSCCCCHHHHHTTTHH-HHTCB---CSSSC
T ss_pred cccccccccccceEEEEECCCCCCCCEEEEeecCCCCCHHHHHHHHHCCCCeEeeCCCCCCCCccc-chhhc---ccCCC
Confidence 99999999999999987 443 37777864 8999999998543110 00122 23345
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHH
Q 012772 296 RSKEEIKKIASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQL 375 (456)
Q Consensus 296 ~~~~~~~~~~~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~ 375 (456)
.+.+.+..++..+..+++++..+..+|+|++|+.++++++++++++|||+|+.++.++++|+.+|..+|+|++|+.++++
T Consensus 297 ~s~e~v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~ 376 (490)
T 3n71_A 297 PSQEVVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARR 376 (490)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 67888999888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHhhh
Q 012772 376 TIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASYKL 451 (456)
Q Consensus 376 ~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~e~~~~~ 451 (456)
+|++++++||++||.+|..+++||.+|..+|++++|+.+|++|++|+++++|++||.|++++.+|++++.|+..++
T Consensus 377 aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~ 452 (490)
T 3n71_A 377 MVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFR 452 (490)
T ss_dssp HHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998776533
No 2
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=100.00 E-value=1.1e-71 Score=562.37 Aligned_cols=393 Identities=23% Similarity=0.465 Sum_probs=324.1
Q ss_pred CCCCCCCeEEEeCCceeecCCCCCCccCcCcCCC-CCCccCcCCCCcccccHHhhhhcHHHhHHhchhhHhchhhhccCC
Q 012772 3 SFHVSGEVIISQEPYVCVPNNSSSISRCDGCFAS-SNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVLSRLDKEKRKSV 81 (456)
Q Consensus 3 ~~i~~G~vil~e~P~~~~~~~~~~~~~C~~C~~~-~~~~~C~~C~~v~yCs~~C~~~~~~~H~~EC~~l~~l~~~~~~~~ 81 (456)
.+|++||+|+.|+|+++++.......+|++|+++ .++.+|++|++++|||++||+.+|++|+.||+.++.+.+. +.+
T Consensus 25 r~i~~Ge~Il~e~P~a~~~~~~~~~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~w~~Hk~eC~~l~~~~~~--~~p 102 (433)
T 3qww_A 25 RPFHVGDLLFSCPAYACVLTVGERGHHCECCFARKEGLSKCGRCKQAFYCDVECQKEDWPLHKLECSSMVVLGEN--WNP 102 (433)
T ss_dssp SCBCTTCEEEEEECSEEEECGGGTTTBCTTTCCBCSSCEECTTTSCCEESSHHHHHHHHHHHTTTHHHHHHSSTT--CCC
T ss_pred CCCCCCCEEEecCCceEEecccccCCcCCcccccCCCCCCCCCCcceeecChhhhhhhhhHHHHHHHHHHHhCcc--CCC
Confidence 4799999999999999999888889999999998 5789999999999999999999999999999999987643 235
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCCCCCCcchHHHHHHHhhhHHHHHHhhhcccchhhhcccCCcchhhhhcccCCCCCccc
Q 012772 82 TPSIRLMLKLYLRRKLQNDNVIPSTTTDNYSLVEALVARILFELIIWFNQFGLVLCFSYNKSLMPAFVNNLFGKDMSDID 161 (456)
Q Consensus 82 ~~~~~l~~R~l~~~~~~~~~~~~~~~~~~~~~~~~L~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (456)
+..+++++|+|++.....+. +..+.+..+..|++|.+ +..
T Consensus 103 ~~~~rl~~Ril~~~~~~~~~----~~~~~~~~~~~L~sh~~------------------------------------~~~ 142 (433)
T 3qww_A 103 SETVRLTARILAKQKIHPER----TPSEKLLAVREFESHLD------------------------------------KLD 142 (433)
T ss_dssp CHHHHHHHHHHHHHHHCCSC----CGGGSSCCGGGCCCCGG------------------------------------GCC
T ss_pred cHHHHHHHHHHHHhhhcccc----CchhhhhhHHHHHhhhh------------------------------------ccC
Confidence 66789999999886543321 11223444566777731 111
Q ss_pred HHHHHHH-HHHHHHHHHhhcC-CCCCHHHHHHHHhhHhccccccccCCCCcceeeeccccccccCCCcCCCeeEEeCCEE
Q 012772 162 EKQLLLY-AQIANLVNLILQW-PEISINEIAENFSKLACNAHTICNSELRPLGTGLYPVISIINHSCLPNAVLVFEGRLA 239 (456)
Q Consensus 162 ~~~~~~~-~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~N~~~i~~~~~~~~g~glyp~~sl~NHSC~PN~~~~f~~~~~ 239 (456)
+++...+ ..+..+...+... ..++.++|..+++++.+|+|+|.+.+...+|.||||.+|+|||||.||+.+.|+|+++
T Consensus 143 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~~~~~~~~~N~f~i~~~~~~~~g~gl~p~~s~~NHsC~PN~~~~~~~~~~ 222 (433)
T 3qww_A 143 NEKKDLIQSDIAALHQFYSKYLEFPDHSSLVVLFAQVNCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGTLA 222 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHHHCEEEECTTCCEEEEEECTTGGGSEECSSCSEEEEEETTEE
T ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHcCCceecccCCccceeEEecccccccCCCCCCCceEEEcCCEE
Confidence 1111111 1122222222221 3458899999999999999999998888999999999999999999999999999999
Q ss_pred EEEEecCCCCCCccc--CCh------hhHHHhhC--CccccCCCCCCCcccCCCCCCeeecc--CCCcCCHHHHHHHHHH
Q 012772 240 VVRAVQHVPKGAEGQ--FDD------IQESAILE--GYRCKDDGCSGFLLRDSDDKGFTCQQ--CGLVRSKEEIKKIASE 307 (456)
Q Consensus 240 ~vra~~~I~~Gee~~--~~~------~r~~~l~~--~f~C~C~~C~~~~~~~~~~~~~~C~~--C~~~~~~~~~~~~~~~ 307 (456)
+|||+++|++||||| |.+ .||+.|++ +|.|.|.+|..+.. +...|.. |+.....+++..+...
T Consensus 223 ~~~a~r~I~~Geel~i~Y~~~~~~~~~R~~~L~~~~~F~C~C~~C~~~~~-----d~~~~~~~~~~~~~~~e~v~~~~~~ 297 (433)
T 3qww_A 223 EVRAVQEIHPGDEVFTSYIDLLYPTEDRNDRLRDSYFFTCECRECTTKDK-----DKAKVEVRKLSSPPQAEAIRDMVRY 297 (433)
T ss_dssp EEEESSCBCTTCEEEECCSCTTSCHHHHHHHHHHHHSCCCCSHHHHHCTT-----HHHHTCBCCCSSCCCHHHHHHHHHH
T ss_pred EEEeccCcCCCCEEEEeecCCcCCHHHHHHHHhCcCCEEeECCCCCCCCc-----chhhhhhhhcCCCccHHHHHHHHHH
Confidence 999999999999986 543 26777764 89999999985321 1122222 3444567777777666
Q ss_pred HHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCC
Q 012772 308 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 387 (456)
Q Consensus 308 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~ 387 (456)
....+++......+|+|++|+.++++++++++++|||+|+.++.++++|+.+|..+|+|++|+.+++++|++++++||++
T Consensus 298 ~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~ 377 (433)
T 3qww_A 298 ARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVY 377 (433)
T ss_dssp HHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCC
Confidence 66777777767778999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHH
Q 012772 388 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEE 442 (456)
Q Consensus 388 hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~ 442 (456)
||.+|..+++||.+|..+|++++|+++|++|++|+++++|++||.|+++..+|++
T Consensus 378 Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l~~ 432 (433)
T 3qww_A 378 SLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQEIES 432 (433)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHC
T ss_pred ChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999998863
No 3
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=100.00 E-value=2.3e-70 Score=553.83 Aligned_cols=388 Identities=26% Similarity=0.441 Sum_probs=317.7
Q ss_pred CCCCCCCeEEEeCCceeecCCCCCCccCcCcCCC-CCCccCcCCCCcccccHHhhhhcHHHhHHhchhhHhchhhhccCC
Q 012772 3 SFHVSGEVIISQEPYVCVPNNSSSISRCDGCFAS-SNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVLSRLDKEKRKSV 81 (456)
Q Consensus 3 ~~i~~G~vil~e~P~~~~~~~~~~~~~C~~C~~~-~~~~~C~~C~~v~yCs~~C~~~~~~~H~~EC~~l~~l~~~~~~~~ 81 (456)
.+|++||+|+.|+|++.++.......+|++|+++ .++.+|++|++++|||++||+.+|+.|+.||+.++.+.+ +++
T Consensus 23 r~i~~Ge~Il~e~P~~~~~~~~~~~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~w~~Hk~eC~~~~~~~~---~~~ 99 (429)
T 3qwp_A 23 TPLRPGELLFRSDPLAYTVCKGSRGVVCDRCLLGKEKLMRCSQCRVAKYCSAKCQKKAWPDHKRECKCLKSCKP---RYP 99 (429)
T ss_dssp SCBCTTCEEEEECCSEEEECGGGBTTBCTTTCCBCSSCEECTTTSCCEESSHHHHHHTHHHHHHHHHHHHHTTT---CCC
T ss_pred CCCCCCCEEEecCCceeeeccccCCCcCcCCCCcCCCCCcCCCCCCcccCChhhhhhhhhhhHHhhhhHHhcCc---cCC
Confidence 4899999999999999999988889999999987 578999999999999999999999999999999998754 245
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCCCCCCcchHHHHHHHhhhHHHHHHhhhcccchhhhcccCCcchhhhhcccCCCCCccc
Q 012772 82 TPSIRLMLKLYLRRKLQNDNVIPSTTTDNYSLVEALVARILFELIIWFNQFGLVLCFSYNKSLMPAFVNNLFGKDMSDID 161 (456)
Q Consensus 82 ~~~~~l~~R~l~~~~~~~~~~~~~~~~~~~~~~~~L~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (456)
...+++++|++++..... + +..+.|..+..|++|.+ +++
T Consensus 100 ~~~~rl~~rill~~~~~~----~-~~~~~~~~~~~L~sh~~------------------------------------~~~ 138 (429)
T 3qwp_A 100 PDSVRLLGRVVFKLMDGA----P-SESEKLYSFYDLESNIN------------------------------------KLT 138 (429)
T ss_dssp CHHHHHHHHHHHHHHHSC----C-CGGGSSSCGGGCCCCGG------------------------------------GCC
T ss_pred ChHHHHHHHHHHHHhcCC----C-CchhhhhhHHHHhhChh------------------------------------hcC
Confidence 677899999998754211 1 22234555677777731 112
Q ss_pred HHHHHHHHHHHHHHHHhhcCC------CCCHHHHHHHHhhHhccccccccCCCCcceeeeccccccccCCCcCCCeeEEe
Q 012772 162 EKQLLLYAQIANLVNLILQWP------EISINEIAENFSKLACNAHTICNSELRPLGTGLYPVISIINHSCLPNAVLVFE 235 (456)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~~~~~~~N~~~i~~~~~~~~g~glyp~~sl~NHSC~PN~~~~f~ 235 (456)
+++...+..+...+..++... ..+.+++..+++++.+|+|+|.+.+...+|.||||.+|+|||||.||+.++|+
T Consensus 139 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~N~f~i~~~~~~~~g~~l~~~~s~~NHsC~PN~~~~~~ 218 (429)
T 3qwp_A 139 EDRKEGLRQLVMTFQHFMREEIQDASQLPPAFDLFEAFAKVICNSFTICNAEMQEVGVGLYPSISLLNHSCDPNCSIVFN 218 (429)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTCCSGGGSCTTCCHHHHHHHHHHHCEEEECTTSCEEEEEECTTGGGCEECSSCSEEEEEE
T ss_pred hhHHHHHHHHHHHHHHHHhhhcCccccCCCHHHHHHHHHHHHhcCccccccccccceEEEchhhHhhCcCCCCCeEEEEe
Confidence 222222222222233333211 23456889999999999999999888899999999999999999999999999
Q ss_pred CCEEEEEEecCCCCCCccc--CCh------hhHHHhhC--CccccCCCCCCCcccCCCCCCeeeccCCCcCCHHHHHHHH
Q 012772 236 GRLAVVRAVQHVPKGAEGQ--FDD------IQESAILE--GYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRSKEEIKKIA 305 (456)
Q Consensus 236 ~~~~~vra~~~I~~Gee~~--~~~------~r~~~l~~--~f~C~C~~C~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~ 305 (456)
|++++|||+|||++||||| |.+ .||+.|.+ +|.|.|++|..+.....-. ..+.. ..
T Consensus 219 ~~~~~~~a~r~I~~GeEl~isY~~~~~~~~~R~~~L~~~~~F~C~C~~C~~~~~~~~~~----------~~~~~----~~ 284 (429)
T 3qwp_A 219 GPHLLLRAVRDIEVGEELTICYLDMLMTSEERRKQLRDQYCFECDCFRCQTQDKDADML----------TGDEQ----VW 284 (429)
T ss_dssp TTEEEEEECSCBCTTCEEEECCSCSSCCHHHHHHHHHHHHCCCCCSHHHHHTTTHHHHT----------CSCHH----HH
T ss_pred CCEEEEEEeeeECCCCEEEEEecCCCCCHHHHHHHHhccCCeEeeCCCCCCCccccccc----------ccchh----hh
Confidence 9999999999999999987 443 37778864 7999999998542110000 00111 11
Q ss_pred HHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcC
Q 012772 306 SEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYP 385 (456)
Q Consensus 306 ~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g 385 (456)
..++++......+..+|+|++|++++++++++++++|||+|+.++.++++|+.+|..+|+|++|+.+++++|++++++||
T Consensus 285 ~~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg 364 (429)
T 3qwp_A 285 KEVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFP 364 (429)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcC
Confidence 22344555556677899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHH
Q 012772 386 QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEAS 448 (456)
Q Consensus 386 ~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~e~~ 448 (456)
++||.+|.++++||.+|..+|++++|+++|++|++|+++++|++||.|++++.+|++++.|+.
T Consensus 365 ~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~ 427 (429)
T 3qwp_A 365 GSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDANIR 427 (429)
T ss_dssp SSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999986
No 4
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.55 E-value=3e-14 Score=145.57 Aligned_cols=112 Identities=13% Similarity=-0.071 Sum_probs=106.4
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCC
Q 012772 309 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 388 (456)
Q Consensus 309 ~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~h 388 (456)
.++...|..+..+|+|++|+.++++++++++++|||+||.++.++++||.+|..+|+|++|+.+++++++++++++|++|
T Consensus 352 ~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~H 431 (490)
T 3n71_A 352 RLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSH 431 (490)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTS
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCC
Confidence 34456677788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 012772 389 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVE 420 (456)
Q Consensus 389 p~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~ 420 (456)
|.++..+..|+.++..+|++++|+.+|++|.+
T Consensus 432 p~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~ 463 (490)
T 3n71_A 432 PITKDLEAMRMQTEMELRMFRQNEFMYHKMRE 463 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999864
No 5
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.43 E-value=6.5e-12 Score=117.10 Aligned_cols=138 Identities=17% Similarity=0.180 Sum_probs=128.7
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCCh
Q 012772 310 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 389 (456)
Q Consensus 310 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp 389 (456)
.....+..+...|++++|+..+++++.+.++.++++++....++..++.+|..+|++++|++++++++.+++...++++|
T Consensus 45 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 124 (283)
T 3edt_B 45 MLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHP 124 (283)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCCh
Confidence 34456667788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHH
Q 012772 390 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEA 447 (456)
Q Consensus 390 ~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~e~ 447 (456)
..+..++++|.++..+|++++|+.++++|+++.+...|+++|....+...|+.+....
T Consensus 125 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~ 182 (283)
T 3edt_B 125 DVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQ 182 (283)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999999999999988888876543
No 6
>2odd_A Protein CBFA2T1; MYND zinc finger, cross-braced topology, poly-proline, proline-tryptophan interaction, metal binding protein; NMR {Homo sapiens}
Probab=99.40 E-value=6.4e-14 Score=101.27 Aligned_cols=57 Identities=33% Similarity=0.648 Sum_probs=40.7
Q ss_pred CCCCCCeEEEeCCceeecCCCCCCccCcCcCCCCCCccCcCCCCcccccHHhhhhcHHHhHHhchhh
Q 012772 4 FHVSGEVIISQEPYVCVPNNSSSISRCDGCFASSNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVL 70 (456)
Q Consensus 4 ~i~~G~vil~e~P~~~~~~~~~~~~~C~~C~~~~~~~~C~~C~~v~yCs~~C~~~~~~~H~~EC~~l 70 (456)
+|++||+||.++| ....|..|++. .+.+|++|+.+.|||++||..+|+.|+.||..+
T Consensus 3 ~~~~G~~il~~~~---------~~~~C~~C~~~-~~~~Cs~C~~~~YCs~~CQ~~~W~~Hk~~C~~~ 59 (64)
T 2odd_A 3 LYFQGENLYFQGD---------SSESCWNCGRK-ASETCSGCNTARYCGSFCQHKDWEKHHHICGQT 59 (64)
T ss_dssp ------------C---------CSSSCTTTSSC-CCEEETTTSCCEESSHHHHHHHHHHHTTTTTSS
T ss_pred cCCCCCEEeeCCC---------CCCcCccccCC-CcccCCCCCChhhCCHHHHHHHHHHHhHHHhcc
Confidence 7899999999999 25789999985 788999999999999999999999999999855
No 7
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.33 E-value=1.6e-11 Score=114.33 Aligned_cols=128 Identities=14% Similarity=0.041 Sum_probs=121.0
Q ss_pred hhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 012772 318 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYT 397 (456)
Q Consensus 318 ~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~ 397 (456)
....|++++|+..+++++++..+.++++++....++..++.+|..+|++++|+.++++++.+.+..+|+++|..+..+..
T Consensus 11 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 90 (283)
T 3edt_B 11 SSGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNN 90 (283)
T ss_dssp --CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHH
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHH
Q 012772 398 CGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 445 (456)
Q Consensus 398 La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~ 445 (456)
+|.++..+|++++|++++++|+++.+...|+++|....++..|+.+..
T Consensus 91 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~ 138 (283)
T 3edt_B 91 LAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQ 138 (283)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988888754
No 8
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.33 E-value=4.7e-12 Score=127.36 Aligned_cols=84 Identities=17% Similarity=0.144 Sum_probs=81.4
Q ss_pred HccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHH
Q 012772 362 ELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLE 441 (456)
Q Consensus 362 ~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~ 441 (456)
..|+|++|+.+++++|.+.++++|++||.++..+++||.+|..+|++++|+.++++|++|.+..+|++||.+...+.+|+
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH
Q 012772 442 EAQA 445 (456)
Q Consensus 442 ~~~~ 445 (456)
.+..
T Consensus 390 ~~~~ 393 (433)
T 3qww_A 390 RLYM 393 (433)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8854
No 9
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=99.31 E-value=3.3e-13 Score=123.66 Aligned_cols=80 Identities=24% Similarity=0.284 Sum_probs=61.1
Q ss_pred HhccccccccCCCCcceeeeccc-cccccCCCcCCCeeEEe-CCEEEEEEecCCCCCCcccCChhhHHHhhCCccccCCC
Q 012772 196 LACNAHTICNSELRPLGTGLYPV-ISIINHSCLPNAVLVFE-GRLAVVRAVQHVPKGAEGQFDDIQESAILEGYRCKDDG 273 (456)
Q Consensus 196 ~~~N~~~i~~~~~~~~g~glyp~-~sl~NHSC~PN~~~~f~-~~~~~vra~~~I~~Gee~~~~~~r~~~l~~~f~C~C~~ 273 (456)
...|.|.+.... .....|+|+. ++++||||.||+...+. ++++.|+|+|+|++|||||+++...-.-..+|.|.|.+
T Consensus 154 ~~~n~f~i~~~~-~~~~~~l~~~~ar~iNHSC~PN~~~~~~~~~~i~v~A~rdI~~GEElt~~Y~~~~~~~~~f~C~C~~ 232 (247)
T 3rq4_A 154 AGENDFSIMYST-RKRSAQLWLGPAAFINHDCKPNCKFVPADGNAACVKVLRDIEPGDEVTCFYGEGFFGEKNEHCECHT 232 (247)
T ss_dssp TTTSCTTEEEET-TTTEEEEEESGGGGCEECSSCSEEEEEETTTEEEEEESSCBCTTCBCEECCCTTSSSGGGTTCCCHH
T ss_pred ccCCcEEEEecC-CcccceeecchhhhcCCCCCCCEEEEEeCCCEEEEEECCcCCCCCEEEEecCchhcCCCCCEEECCC
Confidence 347888887543 3467899987 88999999999987764 68999999999999999986554221111368999999
Q ss_pred CCC
Q 012772 274 CSG 276 (456)
Q Consensus 274 C~~ 276 (456)
|..
T Consensus 233 C~~ 235 (247)
T 3rq4_A 233 CER 235 (247)
T ss_dssp HHH
T ss_pred CCC
Confidence 963
No 10
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.29 E-value=1.6e-11 Score=123.60 Aligned_cols=97 Identities=10% Similarity=-0.021 Sum_probs=89.8
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCC
Q 012772 309 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 388 (456)
Q Consensus 309 ~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~h 388 (456)
..+...+..+..+|+|++|+.+++++++++++++||+||.++..+++||.+|..+|++++|+.+++++++++++.+|++|
T Consensus 330 ~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~H 409 (429)
T 3qwp_A 330 KVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREH 409 (429)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTS
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 34455666778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHc
Q 012772 389 PLLGLQYYTCGKLEWFL 405 (456)
Q Consensus 389 p~~~~~l~~La~~~~~~ 405 (456)
|.++..+.+|+.+...+
T Consensus 410 p~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 410 SLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 99999999999887643
No 11
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.29 E-value=1.4e-10 Score=109.87 Aligned_cols=136 Identities=15% Similarity=0.139 Sum_probs=126.4
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHH
Q 012772 312 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 391 (456)
Q Consensus 312 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~ 391 (456)
...+..+...|++++|+..+++++.+.++.++++++....++..++.+|..+|++++|++++++++.+.+..+|+++|..
T Consensus 73 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~ 152 (311)
T 3nf1_A 73 NILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDV 152 (311)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHH
Confidence 34555677889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHH
Q 012772 392 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEA 447 (456)
Q Consensus 392 ~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~e~ 447 (456)
+..++.+|.++..+|++++|+.++++|+++.....|+++|....+...++.+....
T Consensus 153 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~ 208 (311)
T 3nf1_A 153 AKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQ 208 (311)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999988888888776543
No 12
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.28 E-value=1.2e-10 Score=110.35 Aligned_cols=136 Identities=15% Similarity=0.089 Sum_probs=125.8
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCCh
Q 012772 310 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 389 (456)
Q Consensus 310 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp 389 (456)
.+...+..+...|++++|+..+++++.+..+..+++++....++..++.+|..+|++++|+.++++++.+.+..+|+++|
T Consensus 29 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 108 (311)
T 3nf1_A 29 TLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHP 108 (311)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 33445556778899999999999999998888888899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHH
Q 012772 390 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 445 (456)
Q Consensus 390 ~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~ 445 (456)
..+..++.+|.++..+|++++|+.++++|+++....+|+++|....+...++.+..
T Consensus 109 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~ 164 (311)
T 3nf1_A 109 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQ 164 (311)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998888887753
No 13
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=99.19 E-value=3e-12 Score=118.41 Aligned_cols=80 Identities=23% Similarity=0.223 Sum_probs=57.1
Q ss_pred HhccccccccCCCCcceeeeccccccccCCCcCCCeeEEeCC-EEEEEEecCCCCCCcccCChhhHHHhhCCccccCCCC
Q 012772 196 LACNAHTICNSELRPLGTGLYPVISIINHSCLPNAVLVFEGR-LAVVRAVQHVPKGAEGQFDDIQESAILEGYRCKDDGC 274 (456)
Q Consensus 196 ~~~N~~~i~~~~~~~~g~glyp~~sl~NHSC~PN~~~~f~~~-~~~vra~~~I~~Gee~~~~~~r~~~l~~~f~C~C~~C 274 (456)
...|.|.|........+......++++||||.||+...++|. ++.++|+|+|++|||||+++...-.-..+|.|.|.+|
T Consensus 183 ~~~~dF~i~~s~~~~~a~~~g~~arfiNHSC~PN~~~~~~~~~~i~i~A~RdI~~GEELt~~Y~~~~~~~~~f~C~C~~c 262 (273)
T 3s8p_A 183 HGENDFSVMYSTRKNCAQLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDIEPGEEISCYYGDGFFGENNEFCECYTC 262 (273)
T ss_dssp TTTSCTTEEEETTTTEEEEEESGGGGCEECSSCSEEEEEEETTEEEEEESSCBCTTCBCEECCCTTTTSGGGTTCCCHHH
T ss_pred hcccccceeccccccccceecchHHhhCCCCCCCeEEEEcCCCEEEEEECceeCCCCEEEEecCchhcCCCCeEEECCCC
Confidence 346777776543333343344567999999999999988775 8999999999999999865542211113689999887
Q ss_pred C
Q 012772 275 S 275 (456)
Q Consensus 275 ~ 275 (456)
.
T Consensus 263 ~ 263 (273)
T 3s8p_A 263 E 263 (273)
T ss_dssp H
T ss_pred c
Confidence 5
No 14
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.09 E-value=3.2e-09 Score=87.85 Aligned_cols=101 Identities=12% Similarity=0.110 Sum_probs=87.9
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHH
Q 012772 312 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 391 (456)
Q Consensus 312 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~ 391 (456)
.+.+..+..+|+|++|++.|++++++ .|.+ ..++.++|.+|..+|+|++|++.+++++.+.. -.+..++.+
T Consensus 12 ~~lG~~~~~~~~~~~A~~~y~~Al~~-----~p~~---~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~-~~~~~~~~~ 82 (127)
T 4gcn_A 12 KDLGNAAYKQKDFEKAHVHYDKAIEL-----DPSN---ITFYNNKAAVYFEEKKFAECVQFCEKAVEVGR-ETRADYKLI 82 (127)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCCHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCc-ccchhhHHH
Confidence 34455677899999999999999864 3444 56788999999999999999999999999866 356778899
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 392 GLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 392 ~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
+..++++|.++..+|++++|+++|++|+.+
T Consensus 83 a~~~~~lg~~~~~~~~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 83 AKAMSRAGNAFQKQNDLSLAVQWFHRSLSE 112 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999874
No 15
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=99.02 E-value=9.4e-11 Score=96.10 Aligned_cols=47 Identities=19% Similarity=0.125 Sum_probs=42.2
Q ss_pred ceeeeccccccccCCCcCCCeeEEe--CCEEEEEEecCCCCCCcccCCh
Q 012772 211 LGTGLYPVISIINHSCLPNAVLVFE--GRLAVVRAVQHVPKGAEGQFDD 257 (456)
Q Consensus 211 ~g~glyp~~sl~NHSC~PN~~~~f~--~~~~~vra~~~I~~Gee~~~~~ 257 (456)
-+..++|.++++||||.||+...++ +.++.++|+|+|++||||++++
T Consensus 57 d~~~~~~~~~~~NHsc~pN~~~~~~~~~~~~~~~A~rdI~~GeElt~~Y 105 (119)
T 1n3j_A 57 MSAMALGFGAIFNHSKDPNARHELTAGLKRMRIFTIKPIAIGEEITISY 105 (119)
T ss_dssp EEEEESSSHHHHHSCSSCCCEEEECSSSSCEEEEECSCBCSSEEECCCC
T ss_pred ccccccCceeeeccCCCCCeeEEEECCCeEEEEEEccccCCCCEEEEec
Confidence 5788999999999999999999987 4589999999999999998654
No 16
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.01 E-value=1.2e-08 Score=87.68 Aligned_cols=128 Identities=10% Similarity=0.050 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcC---CC-------CccHHHHHHHHHHHHHHccCHHHHHHHHHH
Q 012772 306 SEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYH---PF-------SVNLMQTREKLIKILMELEDWKEALAYCQL 375 (456)
Q Consensus 306 ~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~---p~-------h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~ 375 (456)
+.+..+...+..+..+|+|++|+..|++++.+...... |. ++....++.+++.+|..+|+|++|+.++.+
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 34566677888888999999999999999987544321 22 456678899999999999999999999999
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHH
Q 012772 376 TIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEAS 448 (456)
Q Consensus 376 ~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~e~~ 448 (456)
++.+ .|.....++.+|.++..+|++++|+..|++|+++ .|+++ ..+...|..+...+.
T Consensus 89 al~~--------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l-----~p~~~--~~~~~~l~~~~~~~~ 146 (162)
T 3rkv_A 89 VLKR--------EETNEKALFRRAKARIAAWKLDEAEEDLKLLLRN-----HPAAA--SVVAREMKIVTERRA 146 (162)
T ss_dssp HHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CGGGH--HHHHHHHHHHHHHHH
T ss_pred HHhc--------CCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhc-----CCCCH--HHHHHHHHHHHHHHH
Confidence 9976 4555678999999999999999999999999988 34444 134455555554443
No 17
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.01 E-value=9.8e-09 Score=84.03 Aligned_cols=121 Identities=11% Similarity=0.020 Sum_probs=101.2
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHH
Q 012772 312 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 391 (456)
Q Consensus 312 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~ 391 (456)
...|..+...|++++|++.+++++.. .|+++....++..++.++..+|+|++|+.++++++.. .++++..
T Consensus 6 ~~~a~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~~ 75 (129)
T 2xev_A 6 YNVAFDALKNGKYDDASQLFLSFLEL-----YPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSR-----YPTHDKA 75 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----CSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTSTTH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHH-----CCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHH-----CCCCccc
Confidence 44566677889999999999988753 5788888889999999999999999999999998864 3677777
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHH
Q 012772 392 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEA 447 (456)
Q Consensus 392 ~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~e~ 447 (456)
...++.+|.++..+|++++|+..|+++++.. |+++........|..+...+
T Consensus 76 ~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~-----p~~~~~~~a~~~l~~l~~~~ 126 (129)
T 2xev_A 76 AGGLLKLGLSQYGEGKNTEAQQTLQQVATQY-----PGSDAARVAQERLQSIRLGQ 126 (129)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----TTSHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-----CCChHHHHHHHHHHHHHhhh
Confidence 8899999999999999999999999998853 78888888888877765543
No 18
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.99 E-value=1.6e-08 Score=83.46 Aligned_cols=104 Identities=14% Similarity=0.140 Sum_probs=86.2
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChH
Q 012772 311 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 390 (456)
Q Consensus 311 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~ 390 (456)
..+.+..+..+|+|++|++.|++++++ .|.+ ..++.+++.+|..+|++++|+..+++++.+ .|.
T Consensus 16 ~~~~G~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~p~ 79 (126)
T 4gco_A 16 EKNKGNEYFKKGDYPTAMRHYNEAVKR-----DPEN---AILYSNRAACLTKLMEFQRALDDCDTCIRL--------DSK 79 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHhhHHHhhccHHHHHHHHHHHHHh--------hhh
Confidence 345666788899999999999999864 3444 567789999999999999999999999975 344
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHH
Q 012772 391 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKE 435 (456)
Q Consensus 391 ~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~ 435 (456)
....++.+|.++..+|++++|++.|++|+++ -|+++....
T Consensus 80 ~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l-----~P~~~~a~~ 119 (126)
T 4gco_A 80 FIKGYIRKAACLVAMREWSKAQRAYEDALQV-----DPSNEEARE 119 (126)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHHHH
T ss_pred hhHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-----CcCCHHHHH
Confidence 4668999999999999999999999999986 466665443
No 19
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.94 E-value=4.3e-08 Score=82.54 Aligned_cols=131 Identities=15% Similarity=0.081 Sum_probs=107.0
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCCh
Q 012772 310 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 389 (456)
Q Consensus 310 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp 389 (456)
.....+..+...|++++|+..+++++.+..+. ++....+.++..++.++..+|++++|++++++++.+.+.. ++.+
T Consensus 11 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~--~~~~ 86 (164)
T 3ro3_A 11 AFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF--GDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQL--KDRA 86 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh--CCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--CCcH
Confidence 34455666778899999999999999886653 3445667889999999999999999999999999988765 5667
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHH
Q 012772 390 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAE 446 (456)
Q Consensus 390 ~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~e 446 (456)
..+..++.+|.++..+|++++|+.++++|+++....- +++........++.+...
T Consensus 87 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~la~~~~~ 141 (164)
T 3ro3_A 87 VEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELK--DRIGEGRACWSLGNAYTA 141 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcc--chHhHHHHHHHHHHHHHH
Confidence 7889999999999999999999999999999987652 455566666777666543
No 20
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.93 E-value=4.9e-08 Score=79.80 Aligned_cols=121 Identities=15% Similarity=0.125 Sum_probs=96.4
Q ss_pred HHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCC
Q 012772 308 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 387 (456)
Q Consensus 308 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~ 387 (456)
.......+..+..+|++++|+..|++++.+ .|.+ ..++.+++.++..+|+|++|+..+++++.+
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~p~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-------- 67 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKR-----APED---ARGYSNRAAALAKLMSFPEAIADCNKAIEK-------- 67 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----CCCC---hHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------
Confidence 344566777788899999999999999864 3444 477889999999999999999999999875
Q ss_pred ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHH
Q 012772 388 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAE 446 (456)
Q Consensus 388 hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~e 446 (456)
.|.....++.+|.++..+|++++|+..|++|+++-.... +.|....+...|..+...
T Consensus 68 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~--~~p~~~~~~~~l~~~~~~ 124 (126)
T 3upv_A 68 DPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVN--NGSSAREIDQLYYKASQQ 124 (126)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH--TTTTHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccC--CchhHHHHHHHHHHHHHh
Confidence 344467899999999999999999999999999874432 345556666666666554
No 21
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.90 E-value=1.1e-07 Score=81.24 Aligned_cols=135 Identities=13% Similarity=0.130 Sum_probs=102.3
Q ss_pred HHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCC--C--ccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Q 012772 307 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPF--S--VNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQR 382 (456)
Q Consensus 307 ~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~--h--~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~ 382 (456)
+...+...+..+...|+|++|++.|++++++........ + +....++.+++.++..+|+|++|+..+.++|.++.+
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 345566777778889999999999999998753310000 1 123448999999999999999999999999998665
Q ss_pred hcCCCChHHHHHH----HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH
Q 012772 383 VYPQFHPLLGLQY----YTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEA 443 (456)
Q Consensus 383 ~~g~~hp~~~~~l----~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~ 443 (456)
. ++-.|..+..+ +++|.++..+|++++|+..|++|+++--.--| .-+....+...+++-
T Consensus 90 ~-~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~-~~~~~~~~~~~~~~~ 152 (159)
T 2hr2_A 90 R-GELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKG-ETPGKERMMEVAIDR 152 (159)
T ss_dssp H-CCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCS-CCTTHHHHHHHHHHH
T ss_pred c-ccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHH-HHHHHHHHHHHHHHH
Confidence 4 46678888888 99999999999999999999999999766433 333444444444433
No 22
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.89 E-value=2.2e-08 Score=98.60 Aligned_cols=127 Identities=9% Similarity=0.029 Sum_probs=110.1
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 012772 314 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 393 (456)
Q Consensus 314 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~ 393 (456)
.+..+...|++++|++.+++++.+.... ++++..+.++..+|.+|..+|++++|+.++++++.+++.. +..++..+.
T Consensus 109 ~g~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~ 185 (383)
T 3ulq_A 109 RGMYELDQREYLSAIKFFKKAESKLIFV--KDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEH-EAYNIRLLQ 185 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTGGGC--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC-STTHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhC--CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC-ccchHHHHH
Confidence 6677788999999999999998765543 5566788999999999999999999999999999999875 556899999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHH
Q 012772 394 QYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 445 (456)
Q Consensus 394 ~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~ 445 (456)
.+++||.++..+|++++|++++++|+++.... .+++....++.+|+.+..
T Consensus 186 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~ 235 (383)
T 3ulq_A 186 CHSLFATNFLDLKQYEDAISHFQKAYSMAEAE--KQPQLMGRTLYNIGLCKN 235 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc--CChHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999876 466777777777777754
No 23
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.88 E-value=3.9e-08 Score=84.01 Aligned_cols=111 Identities=9% Similarity=0.082 Sum_probs=88.2
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCC
Q 012772 309 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 388 (456)
Q Consensus 309 ~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~h 388 (456)
......+..+..+|++++|+..|++++.+ .|.+ ..++.+++.+|..+|+|++|+..+++++.+ .|++
T Consensus 37 ~~~~~lg~~~~~~g~~~eA~~~~~~al~~-----~P~~---~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l-----~P~~ 103 (151)
T 3gyz_A 37 DDIYSYAYDFYNKGRIEEAEVFFRFLCIY-----DFYN---VDYIMGLAAIYQIKEQFQQAADLYAVAFAL-----GKND 103 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----SSSC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHHccHHHHHHHHHHHHhh-----CCCC
Confidence 34455666778899999999999999764 4555 456789999999999999999999999864 2444
Q ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHH
Q 012772 389 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKL 440 (456)
Q Consensus 389 p~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l 440 (456)
| ..++++|.++..+|++++|+..|++|+++ .++++........|
T Consensus 104 ~---~~~~~lg~~~~~lg~~~eA~~~~~~al~l-----~~~~~~~~~A~~ll 147 (151)
T 3gyz_A 104 Y---TPVFHTGQCQLRLKAPLKAKECFELVIQH-----SNDEKLKIKAQSYL 147 (151)
T ss_dssp C---HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCCHHHHHHHHHHH
T ss_pred c---HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCHHHHHHHHHHH
Confidence 4 46899999999999999999999999986 35666444444443
No 24
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.88 E-value=5.1e-08 Score=96.00 Aligned_cols=131 Identities=12% Similarity=0.176 Sum_probs=110.3
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCCh
Q 012772 310 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 389 (456)
Q Consensus 310 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp 389 (456)
.....+..+...|++++|+..+++++++..+. +..++..+.++.++|.+|..+|++++|++++++++.+.+.. ++++
T Consensus 145 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~ 221 (383)
T 3ulq_A 145 FFFKMSESYYYMKQTYFSMDYARQAYEIYKEH-EAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAE--KQPQ 221 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC-STTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC-ccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc--CChH
Confidence 34455666778899999999999999887654 33467789999999999999999999999999999998876 6789
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHH
Q 012772 390 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 445 (456)
Q Consensus 390 ~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~ 445 (456)
..+..+++||.++..+|++++|+.++++|+++...... .|....++..|+.+..
T Consensus 222 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~--~~~~~~~~~~l~~~~~ 275 (383)
T 3ulq_A 222 LMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNI--LPSLPQAYFLITQIHY 275 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC--GGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc--chhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999887632 2556666777766643
No 25
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=98.87 E-value=9e-10 Score=78.09 Aligned_cols=45 Identities=38% Similarity=0.761 Sum_probs=40.7
Q ss_pred CCccCcCcCCCCCCccCcCCCCcccccHHhhhhcHHHhHHhchhhH
Q 012772 26 SISRCDGCFASSNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVLS 71 (456)
Q Consensus 26 ~~~~C~~C~~~~~~~~C~~C~~v~yCs~~C~~~~~~~H~~EC~~l~ 71 (456)
....|..|++. .+.+|++|+.+.|||++||..+|+.|+.||..+.
T Consensus 14 ~~~~C~~C~~~-~~~~Cs~C~~v~YCs~~CQ~~~W~~Hk~~C~~~~ 58 (60)
T 2dj8_A 14 SSESCWNCGRK-ASETCSGCNTARYCGSFCQHKDWEKHHHICSGPS 58 (60)
T ss_dssp CSCCCSSSCSC-CCEECTTTSCCEESSHHHHHHTHHHHTTTSCCSS
T ss_pred CCcccccCCCC-CcccCCCCCCEeeeCHHHHHHHHHHHHHHHHhcc
Confidence 46889999985 7889999999999999999999999999998653
No 26
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=98.85 E-value=1.5e-09 Score=96.20 Aligned_cols=61 Identities=28% Similarity=0.461 Sum_probs=43.9
Q ss_pred ccccccCCCcCCCeeEE---eC-CEEEEEEecCCCCCCcccCChhhHH-HhhCCccccC--CCCCCCc
Q 012772 218 VISIINHSCLPNAVLVF---EG-RLAVVRAVQHVPKGAEGQFDDIQES-AILEGYRCKD--DGCSGFL 278 (456)
Q Consensus 218 ~~sl~NHSC~PN~~~~f---~~-~~~~vra~~~I~~Gee~~~~~~r~~-~l~~~f~C~C--~~C~~~~ 278 (456)
.++++||||.||+...+ +| .++.++|+|+|++|||||+++.... .....|.|.| +.|.+.+
T Consensus 124 ~arfiNHSC~PN~~~~~~~~~g~~~i~i~A~rdI~~GEELt~dY~~~~~~~~~~~~C~Cgs~~Crg~l 191 (192)
T 2w5y_A 124 AARFINHSCEPNCYSRVINIDGQKHIVIFAMRKIYRGEELTYDYKFPIEDASNKLPCNCGAKKCRKFL 191 (192)
T ss_dssp GGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCEEEECCCC-------CCBCCCCCTTCCSBC
T ss_pred hhHhhccCCCCCEEEEEEEECCcEEEEEEECcccCCCCEEEEEcCCchhcCCCCceeECCCCCCcCcC
Confidence 46789999999998753 33 3789999999999999986653211 1134789988 5788754
No 27
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.82 E-value=1.6e-07 Score=78.74 Aligned_cols=120 Identities=13% Similarity=0.093 Sum_probs=93.1
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCC
Q 012772 309 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 388 (456)
Q Consensus 309 ~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~h 388 (456)
......+..+..+|++++|+..+++++.. .|.+ ..++..++.++..+|++++|+.++++++.+ .|++
T Consensus 19 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~ 85 (142)
T 2xcb_A 19 EQLYALGFNQYQAGKWDDAQKIFQALCML-----DHYD---ARYFLGLGACRQSLGLYEQALQSYSYGALM-----DINE 85 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHh-----CCcc---HHHHHHHHHHHHHHhhHHHHHHHHHHHHhc-----CCCC
Confidence 33455666777899999999999988753 4555 456678999999999999999999999874 3445
Q ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHh
Q 012772 389 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASY 449 (456)
Q Consensus 389 p~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~e~~~ 449 (456)
|. .++++|.++..+|++++|++.|++|+++.- ++|....+..........+..
T Consensus 86 ~~---~~~~lg~~~~~~g~~~~A~~~~~~al~~~p-----~~~~~~~~~~~~~~~l~~l~~ 138 (142)
T 2xcb_A 86 PR---FPFHAAECHLQLGDLDGAESGFYSARALAA-----AQPAHEALAARAGAMLEAVTA 138 (142)
T ss_dssp TH---HHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-----TCGGGHHHHHHHHHHHHHHHH
T ss_pred cH---HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----CCcchHHHHHHHHHHHHHHHh
Confidence 44 578999999999999999999999998763 566666655555555555543
No 28
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.81 E-value=1.4e-07 Score=83.21 Aligned_cols=130 Identities=8% Similarity=0.037 Sum_probs=103.7
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCCh
Q 012772 310 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 389 (456)
Q Consensus 310 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp 389 (456)
.....+..+...|++++|+..+++++.+.+.. ...+....++.+++.+|..+|++++|++++++++.+.+ ..|.+++
T Consensus 28 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~ 104 (203)
T 3gw4_A 28 ARFMLGYVYAFMDRFDEARASFQALQQQAQKS--GDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLA-SLPEDPL 104 (203)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HSCCCHH
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHc--CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HcCccHH
Confidence 34455666778899999999999999876543 34566788999999999999999999999999999988 4454555
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Q 012772 390 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQ 444 (456)
Q Consensus 390 ~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~ 444 (456)
..+..++++|.++..+|++++|+.++++|+++.... | +......++..++.+.
T Consensus 105 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-~-~~~~~~~~~~~la~~~ 157 (203)
T 3gw4_A 105 AASANAYEVATVALHFGDLAGARQEYEKSLVYAQQA-D-DQVAIACAFRGLGDLA 157 (203)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc-c-chHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999997654 2 2233344455555544
No 29
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.80 E-value=1.6e-07 Score=79.73 Aligned_cols=115 Identities=12% Similarity=0.122 Sum_probs=89.2
Q ss_pred HHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCC
Q 012772 308 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 387 (456)
Q Consensus 308 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~ 387 (456)
.......+..+..+|++++|+..+++++.+ .|.+ ..++.+++.++..+|+|++|+.++++++.+ .|+
T Consensus 21 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~l-----~p~ 87 (148)
T 2vgx_A 21 LEQLYSLAFNQYQSGXYEDAHXVFQALCVL-----DHYD---SRFFLGLGACRQAMGQYDLAIHSYSYGAVM-----DIX 87 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STT
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHc-----Cccc---HHHHHHHHHHHHHHhhHHHHHHHHHHHHhc-----CCC
Confidence 344556677788899999999999988754 4555 455678999999999999999999999864 244
Q ss_pred ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH
Q 012772 388 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEA 443 (456)
Q Consensus 388 hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~ 443 (456)
+| ..++++|.++..+|++++|+..|++|+++.. ++|....+.......
T Consensus 88 ~~---~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p-----~~~~~~~~~~~~~~~ 135 (148)
T 2vgx_A 88 EP---RFPFHAAECLLQXGELAEAESGLFLAQELIA-----NXPEFXELSTRVSSM 135 (148)
T ss_dssp CT---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT-----TCGGGHHHHHHHHHH
T ss_pred Cc---hHHHHHHHHHHHcCCHHHHHHHHHHHHHHCc-----CCCcchHHHHHHHHH
Confidence 44 4689999999999999999999999988763 455554444443333
No 30
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.80 E-value=2.1e-07 Score=82.65 Aligned_cols=123 Identities=11% Similarity=0.078 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCcc----------HHHHHHHHHHHHHHccCHHHHHHHHHH
Q 012772 306 SEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN----------LMQTREKLIKILMELEDWKEALAYCQL 375 (456)
Q Consensus 306 ~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~----------~~~~~~~L~~~~~~~g~~~~A~~~~~~ 375 (456)
..+..+...+..+..+|++++|+..|++++.+... .+.... ...++.+++.+|..+|+|++|+.++++
T Consensus 36 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~--~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 113 (198)
T 2fbn_A 36 QSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH--TEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASK 113 (198)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT--CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc--ccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 34556667788888999999999999999864321 111111 147888999999999999999999999
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHH
Q 012772 376 TIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAE 446 (456)
Q Consensus 376 ~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~e 446 (456)
++.+ +|.....++.+|.++..+|++++|++.|++|+++ .|+++... ..++.+...
T Consensus 114 al~~--------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~---~~l~~~~~~ 168 (198)
T 2fbn_A 114 VLKI--------DKNNVKALYKLGVANMYFGFLEEAKENLYKAASL-----NPNNLDIR---NSYELCVNK 168 (198)
T ss_dssp HHHH--------STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----STTCHHHH---HHHHHHHHH
T ss_pred HHHh--------CcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHH-----CCCcHHHH---HHHHHHHHH
Confidence 9975 3455678999999999999999999999999987 45555444 444444433
No 31
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.79 E-value=3.5e-07 Score=78.47 Aligned_cols=99 Identities=12% Similarity=0.096 Sum_probs=83.5
Q ss_pred HHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCC
Q 012772 308 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 387 (456)
Q Consensus 308 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~ 387 (456)
...+...+..+...|++++|++.|++++.+ .|.+ ..++.+++.+|..+|+|++|+.++++++.+
T Consensus 11 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~-------- 74 (164)
T 3sz7_A 11 SDKLKSEGNAAMARKEYSKAIDLYTQALSI-----APAN---PIYLSNRAAAYSASGQHEKAAEDAELATVV-------- 74 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCcC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------
Confidence 344556666778899999999999999864 3444 567889999999999999999999999975
Q ss_pred ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 012772 388 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 422 (456)
Q Consensus 388 hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~ 422 (456)
+|.....++++|.++..+|++++|+..|++|+++.
T Consensus 75 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 109 (164)
T 3sz7_A 75 DPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109 (164)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 34446789999999999999999999999999875
No 32
>2jw6_A Deformed epidermal autoregulatory factor 1 homolo; zinc binding domain, transcription, alternative splicing, DI mutation, DNA-binding; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=98.78 E-value=1.4e-09 Score=74.82 Aligned_cols=46 Identities=30% Similarity=0.746 Sum_probs=37.5
Q ss_pred CCCCCccCcCcCCCCCCccCcCCCCcccccHHhhhhcHHHhHHhchh
Q 012772 23 NSSSISRCDGCFASSNLKKCSACQVVWYCGSNCQKLDWKLHRLECQV 69 (456)
Q Consensus 23 ~~~~~~~C~~C~~~~~~~~C~~C~~v~yCs~~C~~~~~~~H~~EC~~ 69 (456)
.+.....|..|++. .+.+|++|+.+.|||++||..+|+.|+.||..
T Consensus 5 ~~~~~~~C~~C~~~-~~~~C~~C~~~~YCs~~CQ~~~W~~Hk~~C~~ 50 (52)
T 2jw6_A 5 AERKEQSCVNCGRE-AMSECTGCHKVNYCSTFCQRKDWKDHQHICGQ 50 (52)
T ss_dssp ------CCSSSSSS-CSEECTTTCSSEESSHHHHHHHTTTGGGTTTC
T ss_pred ccccCCcCCCCCCC-CcCcCCCCCCEeecCHHHHHHHHHHHCHHHcc
Confidence 34456899999986 78999999999999999999999999999973
No 33
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.78 E-value=1.7e-07 Score=92.12 Aligned_cols=130 Identities=10% Similarity=0.089 Sum_probs=108.6
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCCh
Q 012772 310 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 389 (456)
Q Consensus 310 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp 389 (456)
.....+..+...|++++|+..+++++.+..+. +...+..+.++.++|.+|..+|+|++|++++++++.+.+.. ++.+
T Consensus 143 ~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~--~~~~ 219 (378)
T 3q15_A 143 FHFKVAEAYYHMKQTHVSMYHILQALDIYQNH-PLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDI--QNDR 219 (378)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTS-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhC-CCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc--CCHH
Confidence 34455666778899999999999999887543 22244678999999999999999999999999999998765 5666
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHH
Q 012772 390 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 445 (456)
Q Consensus 390 ~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~ 445 (456)
..+..+++||.++..+|++++|+.++++|+++.+.. .+|....++..|+.+..
T Consensus 220 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~la~~~~ 272 (378)
T 3q15_A 220 FIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREK---VPDLLPKVLFGLSWTLC 272 (378)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH---CGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh---CChhHHHHHHHHHHHHH
Confidence 889999999999999999999999999999999887 55666677777777653
No 34
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.78 E-value=1.1e-07 Score=90.17 Aligned_cols=129 Identities=10% Similarity=0.028 Sum_probs=104.4
Q ss_pred HHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHH
Q 012772 315 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQ 394 (456)
Q Consensus 315 a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~ 394 (456)
+..+..+|++++|++.+++++.+..+ .++....+.++.++|.+|..+|++++|+.++++++..++. ++.+++..+..
T Consensus 122 ~~~~~~~~~~~~Ai~~~~~al~~~~~--~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~ 198 (293)
T 3u3w_A 122 AAYVLKKVDYEYCILELKKLLNQQLT--GIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEA-LHDNEEFDVKV 198 (293)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHTCCC--CSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-SSCCHHHHHHH
T ss_pred HHHHHcccCHHHHHHHHHHHHHHhcc--cccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-cccchhHHHHH
Confidence 33456778999999999999874222 2233345778999999999999999999999999998876 45688999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHH
Q 012772 395 YYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEAS 448 (456)
Q Consensus 395 l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~e~~ 448 (456)
++++|.++..+|++++|++++++|+++.... .+++....++..++.+...+.
T Consensus 199 ~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~~~~~g 250 (293)
T 3u3w_A 199 RYNHAKALYLDSRYEESLYQVNKAIEISCRI--NSMALIGQLYYQRGECLRKLE 250 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TBCTTHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHc--CcHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999998765 255666777777776655443
No 35
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.77 E-value=2e-07 Score=88.34 Aligned_cols=112 Identities=19% Similarity=0.132 Sum_probs=94.5
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCcc-HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCC
Q 012772 310 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN-LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 388 (456)
Q Consensus 310 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~-~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~h 388 (456)
.....+..+..+|++++|+..+++++.+.+.. +.+.. ...++.++|.+|..+|+|++|++++++++.+... ..++
T Consensus 157 ~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~--~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~--~~~~ 232 (293)
T 2qfc_A 157 IENAIANIYAENGYLKKGIDLFEQILKQLEAL--HDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR--INSM 232 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--TTBC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc--CccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh--cCcH
Confidence 34455666778999999999999999876543 23333 3388999999999999999999999999998754 4677
Q ss_pred hHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHh
Q 012772 389 PLLGLQYYTCGKLEWFLGDTENA-IKSMTEAVEILRIT 425 (456)
Q Consensus 389 p~~~~~l~~La~~~~~~g~~~eA-~~~l~~Al~i~~~~ 425 (456)
..++..++++|.++..+|++++| ..++++|+.+.+..
T Consensus 233 ~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~~ 270 (293)
T 2qfc_A 233 ALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDIL 270 (293)
T ss_dssp SSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHh
Confidence 78899999999999999999999 88899999999875
No 36
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.77 E-value=1.8e-07 Score=88.74 Aligned_cols=125 Identities=12% Similarity=-0.027 Sum_probs=99.1
Q ss_pred HHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHH
Q 012772 315 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQ 394 (456)
Q Consensus 315 a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~ 394 (456)
+..+..+|++++|++.|++++.+..+. + +....+.++.+++.+|..+|++++|+.++++++.++... ++....+..
T Consensus 44 ~~~~~~~g~~~~A~~~~~~al~~~~~~-~-~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~--g~~~~~a~~ 119 (292)
T 1qqe_A 44 ATIYRLRKELNLAGDSFLKAADYQKKA-G-NEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHR--GQFRRGANF 119 (292)
T ss_dssp HHHHHHTTCTHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHh-C-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc--CCHHHHHHH
Confidence 445667899999999999999887653 2 334568899999999999999999999999999988653 445566889
Q ss_pred HHHHHHHHHHc-CCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHH
Q 012772 395 YYTCGKLEWFL-GDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 445 (456)
Q Consensus 395 l~~La~~~~~~-g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~ 445 (456)
+.++|.++..+ |++++|+.+|++|+++.... | ++.....++.+++.+..
T Consensus 120 ~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~-~-~~~~~~~~~~~lg~~~~ 169 (292)
T 1qqe_A 120 KFELGEILENDLHDYAKAIDCYELAGEWYAQD-Q-SVALSNKCFIKCADLKA 169 (292)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhC-C-ChHHHHHHHHHHHHHHH
Confidence 99999999996 99999999999999998753 1 12233455566665543
No 37
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.76 E-value=1.4e-07 Score=89.50 Aligned_cols=112 Identities=17% Similarity=0.125 Sum_probs=97.6
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChH
Q 012772 311 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 390 (456)
Q Consensus 311 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~ 390 (456)
....+..+..+|++++|+..+++++...++ ++.+++..+.++.+++.+|..+|+|++|++++++++.+.+.. .+++.
T Consensus 158 ~~~lg~~y~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~--~~~~~ 234 (293)
T 3u3w_A 158 ENAIANIYAENGYLKKGIDLFEQILKQLEA-LHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRI--NSMAL 234 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TBCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-cccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHc--CcHHH
Confidence 444556677899999999999999987655 344677788899999999999999999999999999988764 56778
Q ss_pred HHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHh
Q 012772 391 LGLQYYTCGKLEWFLGD-TENAIKSMTEAVEILRIT 425 (456)
Q Consensus 391 ~~~~l~~La~~~~~~g~-~~eA~~~l~~Al~i~~~~ 425 (456)
.+..++++|.++..+|+ +++|++++++|+.+.+..
T Consensus 235 ~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~~ 270 (293)
T 3u3w_A 235 IGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDIL 270 (293)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHh
Confidence 89999999999999995 699999999999999965
No 38
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.75 E-value=5.9e-08 Score=97.88 Aligned_cols=117 Identities=10% Similarity=0.056 Sum_probs=100.1
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHHHhhcC-CCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHH
Q 012772 314 KTLALTSCGNHQEVVSTYKMIEKLQKKLYH-PFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 392 (456)
Q Consensus 314 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~-p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~ 392 (456)
.+..+..+|++++|++.+++++++.....+ ..++..+.++.++|.+|..+|++++|+.++++++.+.+...++.++..+
T Consensus 57 Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~ 136 (472)
T 4g1t_A 57 LAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESP 136 (472)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhH
Confidence 455567889999999999999998765443 3477888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHhcCCCCchHHH
Q 012772 393 LQYYTCGKLEWFL--GDTENAIKSMTEAVEILRITHGTNSPFMKE 435 (456)
Q Consensus 393 ~~l~~La~~~~~~--g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~ 435 (456)
..+.++|.++... +++++|+.+|++|+++ .|++|....
T Consensus 137 ~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~-----~p~~~~~~~ 176 (472)
T 4g1t_A 137 ELDCEEGWTRLKCGGNQNERAKVCFEKALEK-----KPKNPEFTS 176 (472)
T ss_dssp HHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH-----STTCHHHHH
T ss_pred HHHHHHHHHHHHHccccHHHHHHHHHHHHHh-----CCCCHHHHH
Confidence 9999999877765 4699999999999986 467776543
No 39
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.75 E-value=2.2e-07 Score=78.11 Aligned_cols=111 Identities=20% Similarity=0.167 Sum_probs=95.4
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCCh
Q 012772 310 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 389 (456)
Q Consensus 310 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp 389 (456)
.....+..+...|++++|++.+++++.+.... ++......++.+++.++..+|++++|++++++++.+.+.. .+++
T Consensus 51 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~ 126 (164)
T 3ro3_A 51 AYSNLGNAYIFLGEFETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL--KDRI 126 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--CCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHc--cchH
Confidence 34456666788999999999999999876553 3455668889999999999999999999999999987764 4678
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q 012772 390 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 424 (456)
Q Consensus 390 ~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~ 424 (456)
..+..+..+|.++..+|++++|.+++++|+++...
T Consensus 127 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 127 GEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999998764
No 40
>2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens}
Probab=98.74 E-value=3.2e-09 Score=75.15 Aligned_cols=44 Identities=36% Similarity=0.774 Sum_probs=40.0
Q ss_pred CCccCcCcCCCCCCccCcCCCCcccccHHhhhhcHHHhHHhchhh
Q 012772 26 SISRCDGCFASSNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVL 70 (456)
Q Consensus 26 ~~~~C~~C~~~~~~~~C~~C~~v~yCs~~C~~~~~~~H~~EC~~l 70 (456)
....|..|.+. .+.+|++|+.+.|||++||..+|+.|+.+|..+
T Consensus 12 ~~~~C~~C~~~-~~~~Cs~C~~v~YCs~~CQ~~dW~~Hk~~C~~~ 55 (60)
T 2od1_A 12 SSESCWNCGRK-ASETCSGCNTARYCGSFCQHKDWEKHHHICGQT 55 (60)
T ss_dssp CSSCCTTTSSC-CCEECTTTSCCEESSHHHHHHHHHHHTTTSSCS
T ss_pred CCCccccCCCc-ccccCCCCCCeeecCHHHHHHHHHHHhHHHccc
Confidence 46889999985 788999999999999999999999999999854
No 41
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.74 E-value=8.8e-07 Score=71.64 Aligned_cols=104 Identities=13% Similarity=0.108 Sum_probs=87.4
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCC
Q 012772 309 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 388 (456)
Q Consensus 309 ~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~h 388 (456)
......+..+...|++++|+..+++++.. .|.+ ..++..++.++..+|++++|+.++++++.... -.+..+
T Consensus 5 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~ 75 (131)
T 1elr_A 5 LKEKELGNDAYKKKDFDTALKHYDKAKEL-----DPTN---MTYITNQAAVYFEKGDYNKCRELCEKAIEVGR-ENREDY 75 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-HSTTCH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCcc---HHHHHHHHHHHHHhccHHHHHHHHHHHHhhcc-ccchhH
Confidence 34455666677889999999999998764 2443 46778999999999999999999999998765 346677
Q ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 389 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 389 p~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
+..+..++.+|.++..+|++++|.+.+++++++
T Consensus 76 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 108 (131)
T 1elr_A 76 RQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAE 108 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 777999999999999999999999999999985
No 42
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.73 E-value=2.7e-07 Score=76.82 Aligned_cols=111 Identities=15% Similarity=0.161 Sum_probs=89.4
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChH
Q 012772 311 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 390 (456)
Q Consensus 311 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~ 390 (456)
....+..+...|++++|++.+++++. +.|++.....++..++.+|..+|+|++|+.++++++.. +|.
T Consensus 31 ~~~~a~~~~~~~~~~~A~~~~~~a~~-----~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--------~~~ 97 (148)
T 2dba_A 31 LRKEGNELFKCGDYGGALAAYTQALG-----LDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEK--------DGG 97 (148)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------TSC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHH-----HcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh--------Ccc
Confidence 34555667788999999999998864 35666666888999999999999999999999999875 233
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHH
Q 012772 391 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILK 439 (456)
Q Consensus 391 ~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~ 439 (456)
....++.+|.++..+|++++|+..|++++++ .|+++.+...+..
T Consensus 98 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~~~l~~ 141 (148)
T 2dba_A 98 DVKALYRRSQALEKLGRLDQAVLDLQRCVSL-----EPKNKVFQEALRN 141 (148)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CSSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-----CCCcHHHHHHHHH
Confidence 3677899999999999999999999999975 4666655544433
No 43
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.73 E-value=9.2e-07 Score=72.80 Aligned_cols=100 Identities=13% Similarity=0.123 Sum_probs=83.5
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCCh
Q 012772 310 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 389 (456)
Q Consensus 310 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp 389 (456)
.....+..+...|++++|+..+++++.. .|.+ ..++..++.++..+|+|++|+.++++++.+ +|
T Consensus 11 ~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--------~p 74 (137)
T 3q49_B 11 ELKEQGNRLFVGRKYPEAAACYGRAITR-----NPLV---AVYYTNRALCYLKMQQPEQALADCRRALEL--------DG 74 (137)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CT
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhh-----CcCc---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------Cc
Confidence 3445566677889999999999998764 3444 567889999999999999999999999875 23
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Q 012772 390 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 425 (456)
Q Consensus 390 ~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~ 425 (456)
.....++.+|.++..+|++++|+..+++|+++-...
T Consensus 75 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~ 110 (137)
T 3q49_B 75 QSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 110 (137)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhH
Confidence 445689999999999999999999999999987663
No 44
>2d8q_A BLU protein, zinc finger MYND domain containing protein 10; zmynd10, ZF-MYND, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.1 PDB: 2dan_A
Probab=98.71 E-value=1.1e-08 Score=74.61 Aligned_cols=45 Identities=38% Similarity=0.890 Sum_probs=40.9
Q ss_pred CccCcCcCCCCCCccCcCCCCcccccHHhhhhcHHHhHHhchhhHh
Q 012772 27 ISRCDGCFASSNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVLSR 72 (456)
Q Consensus 27 ~~~C~~C~~~~~~~~C~~C~~v~yCs~~C~~~~~~~H~~EC~~l~~ 72 (456)
...|..|.+. .+.+|.+|+.+.|||++||..+|+.|+.+|..+..
T Consensus 15 ~~~C~~C~~~-~~~~Cs~Ck~v~YCs~eCQ~~~W~~HK~~C~~~~~ 59 (70)
T 2d8q_A 15 RPRCAYCSAE-ASKRCSRCQNEWYCCRECQVKHWEKHGKTCVLAAQ 59 (70)
T ss_dssp CCBCSSSCCB-CCCBCTTTSCCBCSCHHHHHHTHHHHHHHCCCCCC
T ss_pred CCcCCCCCCc-ccccCCCCCCEeeCCHHHhHHHHHHHHHHHHHHHH
Confidence 5799999986 78899999999999999999999999999996653
No 45
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.71 E-value=2.9e-07 Score=87.24 Aligned_cols=126 Identities=10% Similarity=0.026 Sum_probs=99.6
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHH-
Q 012772 314 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG- 392 (456)
Q Consensus 314 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~- 392 (456)
.+..+..+|++++|++.+++++.+..+ ..+....+.++.++|.+|..+|+|++|+.++++++.+.+.. + +.+...
T Consensus 121 ~~~~~~~~~~~~~A~~~~~~al~~~~~--~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~-~-~~~~~~~ 196 (293)
T 2qfc_A 121 VAAYVLKKVDYEYCILELKKLLNQQLT--GIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEAL-H-DNEEFDV 196 (293)
T ss_dssp HHHHHHTSSCHHHHHHHHHHHHTTCCC--SSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-C-CCHHHHH
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHhc--CCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-C-ccccchH
Confidence 344456788999999999988765432 12333467899999999999999999999999999988854 3 334433
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHH
Q 012772 393 LQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 445 (456)
Q Consensus 393 ~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~ 445 (456)
..++++|.++..+|++++|++++++|+++... ..++.....+...++.+..
T Consensus 197 ~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~--~~~~~~~~~~~~~lg~~y~ 247 (293)
T 2qfc_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEISCR--INSMALIGQLYYQRGECLR 247 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--TTBCSSHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh--cCcHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999854 3466667777777777654
No 46
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.70 E-value=1.2e-07 Score=101.42 Aligned_cols=91 Identities=21% Similarity=0.266 Sum_probs=44.2
Q ss_pred HHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHH
Q 012772 315 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQ 394 (456)
Q Consensus 315 a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~ 394 (456)
+..+..+|++++|++.|++++++ .|+ ...++.+|+.+|..+|++++|++++++++++ +|..+..
T Consensus 50 g~~l~~~g~~~eA~~~~~~Al~l-----~P~---~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l--------~P~~~~a 113 (723)
T 4gyw_A 50 ASVLQQQGKLQEALMHYKEAIRI-----SPT---FADAYSNMGNTLKEMQDVQGALQCYTRAIQI--------NPAFADA 113 (723)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH-----CTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHh-----CCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHH
Confidence 33344445555555555544432 122 2344455555555555555555555555443 2333444
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 395 YYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 395 l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
+++||.++..+|++++|++.|++|+++
T Consensus 114 ~~~Lg~~~~~~g~~~eAi~~~~~Al~l 140 (723)
T 4gyw_A 114 HSNLASIHKDSGNIPEAIASYRTALKL 140 (723)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 555555555555555555555555543
No 47
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.69 E-value=5.5e-07 Score=88.68 Aligned_cols=123 Identities=13% Similarity=0.146 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhh--------cCCCCccHHHHHHHHHHHHHHccCHHHHHHHH
Q 012772 302 KKIASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKL--------YHPFSVNLMQTREKLIKILMELEDWKEALAYC 373 (456)
Q Consensus 302 ~~~~~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~--------l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~ 373 (456)
....+.+..+...+..+..+|++++|++.|++++++.... ....++....++.+++.+|..+|+|++|++++
T Consensus 217 ~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~ 296 (370)
T 1ihg_A 217 DKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSC 296 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHH
Confidence 3344556667778888899999999999999999864432 11135566788999999999999999999999
Q ss_pred HHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHH
Q 012772 374 QLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELI 437 (456)
Q Consensus 374 ~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~ 437 (456)
++++.+ +|..+..++.+|.++..+|++++|++.|++|+++ -|+++.....+
T Consensus 297 ~~al~~--------~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l-----~P~~~~~~~~l 347 (370)
T 1ihg_A 297 LEALEI--------DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEI-----APEDKAIQAEL 347 (370)
T ss_dssp HHHHTT--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHHHHHH
T ss_pred HHHHHh--------CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCCCHHHHHHH
Confidence 999963 4556788999999999999999999999999986 35565544433
No 48
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.68 E-value=4.8e-07 Score=79.79 Aligned_cols=126 Identities=13% Similarity=0.094 Sum_probs=100.6
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChH
Q 012772 311 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 390 (456)
Q Consensus 311 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~ 390 (456)
....+..+...|++++|++.+++++.+.+. .+........++.+++.++..+|++++|+.++++++.+.+.. ++...
T Consensus 69 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~ 145 (203)
T 3gw4_A 69 LHQVGMVERMAGNWDAARRCFLEERELLAS-LPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQA--DDQVA 145 (203)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TCHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-cCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc--cchHH
Confidence 345566677899999999999999988653 343444778899999999999999999999999999987653 44566
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHH
Q 012772 391 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLE 441 (456)
Q Consensus 391 ~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~ 441 (456)
.+..+..+|.++..+|++++|..++++|+++.... | +......++..+.
T Consensus 146 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~-~-~~~~~~~~~~~~~ 194 (203)
T 3gw4_A 146 IACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAEL-E-DSEAVNELMTRLN 194 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHc-C-CHHHHHHHHhccc
Confidence 78889999999999999999999999999999876 2 2233344444443
No 49
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.68 E-value=5.1e-07 Score=89.06 Aligned_cols=132 Identities=11% Similarity=0.065 Sum_probs=110.2
Q ss_pred HHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCcc-HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcC
Q 012772 307 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN-LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYP 385 (456)
Q Consensus 307 ~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~-~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g 385 (456)
....+...+..+...|++++|+..+++++.+ .|.++. ...++..++.+|..+|++++|+.++++++.+.+..
T Consensus 47 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~-----~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-- 119 (411)
T 4a1s_A 47 MCLELALEGERLCNAGDCRAGVAFFQAAIQA-----GTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSM-- 119 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHh-----cccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc--
Confidence 3455667777788899999999999999864 455554 56788999999999999999999999999998876
Q ss_pred CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHH
Q 012772 386 QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEA 447 (456)
Q Consensus 386 ~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~e~ 447 (456)
.++|..+..++.+|.++..+|++++|+.++++|+++.... .+++....++..++.+....
T Consensus 120 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~ 179 (411)
T 4a1s_A 120 NDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL--GDRLSEGRALYNLGNVYHAK 179 (411)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh--hchHHHHHHHHHHHHHHHHc
Confidence 6789999999999999999999999999999999998876 25566666666666655443
No 50
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.68 E-value=4e-07 Score=89.48 Aligned_cols=111 Identities=11% Similarity=0.002 Sum_probs=95.8
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCCh
Q 012772 310 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 389 (456)
Q Consensus 310 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp 389 (456)
.....+..+...|++++|++.+++++.+.++. ++......++.+||.+|..+|++++|++++++++.+.+.. .+|
T Consensus 184 ~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~---~~~ 258 (378)
T 3q15_A 184 SLFVIAGNYDDFKHYDKALPHLEAALELAMDI--QNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREK---VPD 258 (378)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH---CGG
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh---CCh
Confidence 34455666778999999999999999887654 3445778899999999999999999999999999998876 566
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Q 012772 390 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 425 (456)
Q Consensus 390 ~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~ 425 (456)
..+..+++||.++..+|++++|..++++|+++....
T Consensus 259 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 294 (378)
T 3q15_A 259 LLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITAR 294 (378)
T ss_dssp GHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTT
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc
Confidence 778999999999999999999999999999986553
No 51
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=98.67 E-value=7.3e-09 Score=94.84 Aligned_cols=61 Identities=28% Similarity=0.349 Sum_probs=43.9
Q ss_pred ccccccCCCcCCCeeEE--eC--CEEEEEEecCCCCCCcccCChhhHHHhhCCccccC--CCCCCCc
Q 012772 218 VISIINHSCLPNAVLVF--EG--RLAVVRAVQHVPKGAEGQFDDIQESAILEGYRCKD--DGCSGFL 278 (456)
Q Consensus 218 ~~sl~NHSC~PN~~~~f--~~--~~~~vra~~~I~~Gee~~~~~~r~~~l~~~f~C~C--~~C~~~~ 278 (456)
.+.++||||.||+...+ .+ .++.+.|+|+|++|||||++|...-.-...|.|.| +.|.|.+
T Consensus 165 ~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~~~~~C~CGs~~CrG~l 231 (232)
T 3ooi_A 165 YARFMNHCCQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLGNGKTVCKCGAPNCSGFL 231 (232)
T ss_dssp GGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTCSTTCTTCBCCCCCTTCCSBC
T ss_pred ccccccccCCCCeEEEEEEECCceEEEEEECCccCCCCEEEEECCCCcCCCCCcEeECCCCcCcCcC
Confidence 45688999999998753 23 47889999999999999976642111123688877 4687654
No 52
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.65 E-value=2.5e-07 Score=85.82 Aligned_cols=114 Identities=12% Similarity=0.117 Sum_probs=97.4
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCC
Q 012772 309 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 388 (456)
Q Consensus 309 ~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~h 388 (456)
..+...|..+..+|++++|+..+++++. ..|.++....++..+|.+|..+|+|++|+.++++++.. -|.+
T Consensus 16 ~~~~~~a~~~~~~g~~~~A~~~~~~~l~-----~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~-----~p~~ 85 (261)
T 3qky_A 16 QEAFERAMEFYNQGKYDRAIEYFKAVFT-----YGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQI-----YQID 85 (261)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHGG-----GCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHH-----hCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH-----CCCC
Confidence 4456677778889999999999998864 45888888999999999999999999999999999875 2567
Q ss_pred hHHHHHHHHHHHHHHH--------cCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHH
Q 012772 389 PLLGLQYYTCGKLEWF--------LGDTENAIKSMTEAVEILRITHGTNSPFMKELI 437 (456)
Q Consensus 389 p~~~~~l~~La~~~~~--------~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~ 437 (456)
|.....++.+|.++.. +|++++|+..|+++++. -|+++.....+
T Consensus 86 ~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~-----~p~~~~~~~a~ 137 (261)
T 3qky_A 86 PRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDR-----YPNHELVDDAT 137 (261)
T ss_dssp TTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHH-----CTTCTTHHHHH
T ss_pred chhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHH-----CcCchhHHHHH
Confidence 8888999999999999 99999999999999875 36777666555
No 53
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.63 E-value=1.6e-07 Score=75.96 Aligned_cols=97 Identities=12% Similarity=0.087 Sum_probs=77.3
Q ss_pred cCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 012772 321 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGK 400 (456)
Q Consensus 321 ~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~ 400 (456)
+|++++|+..++++++ +++.++....++.+++.+|..+|+|++|+.++++++.. +|.....++.+|.
T Consensus 3 ~g~~~~A~~~~~~al~-----~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~l~~ 69 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIA-----SGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQ--------FPNHQALRVFYAM 69 (117)
T ss_dssp ----CCCHHHHHHHHS-----SCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHH-----cCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCchHHHHHHHH
Confidence 5788999999998875 33446778899999999999999999999999999865 2333668899999
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHH
Q 012772 401 LEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKE 435 (456)
Q Consensus 401 ~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~ 435 (456)
++..+|++++|+..+++|+++. |++|.+..
T Consensus 70 ~~~~~g~~~~A~~~~~~al~~~-----p~~~~~~~ 99 (117)
T 3k9i_A 70 VLYNLGRYEQGVELLLKIIAET-----SDDETIQS 99 (117)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHH-----CCCHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhC-----CCcHHHHH
Confidence 9999999999999999998763 56665543
No 54
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.63 E-value=2.5e-06 Score=72.37 Aligned_cols=107 Identities=14% Similarity=0.120 Sum_probs=87.2
Q ss_pred HHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCC
Q 012772 307 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQ 386 (456)
Q Consensus 307 ~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~ 386 (456)
........+..+...|++++|+..+++++.. .|.+ ..++..++.++..+|+|++|+.++++++..
T Consensus 12 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~------- 76 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYENAIKFYSQAIEL-----NPSN---AIYYGNRSLAYLRTECYGYALGDATRAIEL------- 76 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCCC---hHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------
Confidence 3455666777788899999999999998764 3433 567889999999999999999999999875
Q ss_pred CChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHH
Q 012772 387 FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMK 434 (456)
Q Consensus 387 ~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~ 434 (456)
+|.....++.+|.++..+|++++|+.++++|+++ .|+++...
T Consensus 77 -~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~-----~p~~~~~~ 118 (166)
T 1a17_A 77 -DKKYIKGYYRRAASNMALGKFRAALRDYETVVKV-----KPHDKDAK 118 (166)
T ss_dssp -CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTCHHHH
T ss_pred -CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHh-----CCCCHHHH
Confidence 2344668899999999999999999999999976 45555443
No 55
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.61 E-value=3.6e-07 Score=87.32 Aligned_cols=124 Identities=15% Similarity=0.103 Sum_probs=93.3
Q ss_pred HHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHH
Q 012772 315 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQ 394 (456)
Q Consensus 315 a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~ 394 (456)
+..+..+|++++|++.+++++++..+. + +....+.++.+++.+|..+|++++|+.++++++.+++.. ++....+..
T Consensus 43 ~~~~~~~g~~~~A~~~~~~al~~~~~~-~-~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~--g~~~~~a~~ 118 (307)
T 2ifu_A 43 AVAFKNAKQLEQAKDAYLQEAEAHANN-R-SLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVEN--GTPDTAAMA 118 (307)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTT--TCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCHHHHHHH
Confidence 344667789999999999988876543 2 344567888899999999999999999999999887642 344567788
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHH
Q 012772 395 YYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 445 (456)
Q Consensus 395 l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~ 445 (456)
+.++|.++.. |++++|+.+|++|+++.... | +......++.+++.+..
T Consensus 119 ~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~-~-~~~~~~~~~~~lg~~~~ 166 (307)
T 2ifu_A 119 LDRAGKLMEP-LDLSKAVHLYQQAAAVFENE-E-RLRQAAELIGKASRLLV 166 (307)
T ss_dssp HHHHHHHHTT-TCHHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHc-CCHHHHHHHHHHHHHHHHhC-C-ChhHHHHHHHHHHHHHH
Confidence 8999999988 99999999999999988763 2 22334456666665543
No 56
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.61 E-value=1.3e-06 Score=69.13 Aligned_cols=108 Identities=24% Similarity=0.242 Sum_probs=85.7
Q ss_pred HHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCC
Q 012772 308 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 387 (456)
Q Consensus 308 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~ 387 (456)
+......+..+...|++++|+..+++++.. .|.+ ..++..++.++..+|++++|+.++++++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-------- 67 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKL-----DPHN---HVLYSNRSAAYAKKGDYQKAYEDGCKTVDL-------- 67 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHH-----CCCc---HHHHHHHHHHHHhhccHHHHHHHHHHHHHh--------
Confidence 344556667777899999999999998764 3444 457788999999999999999999999875
Q ss_pred ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHH
Q 012772 388 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKEL 436 (456)
Q Consensus 388 hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~ 436 (456)
.|.....++.+|.++..+|++++|.+.+++++++ .|+++.....
T Consensus 68 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-----~~~~~~~~~~ 111 (118)
T 1elw_A 68 KPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKH-----EANNPQLKEG 111 (118)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-----CTTCHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHc-----CCCCHHHHHH
Confidence 2334567899999999999999999999999864 5666655433
No 57
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.61 E-value=5.9e-07 Score=76.22 Aligned_cols=109 Identities=11% Similarity=-0.048 Sum_probs=87.7
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHH
Q 012772 312 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 391 (456)
Q Consensus 312 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~ 391 (456)
...|..+...|++++|++.+++++++ .|++ ..++..++.+|..+|++++|+.++++++.+ .|.-
T Consensus 35 ~~la~~y~~~~~~~~A~~~~~~al~~-----~p~~---~~a~~~lg~~~~~~~~~~~A~~~~~~al~~--------~p~~ 98 (150)
T 4ga2_A 35 FYFAKLYYEAKEYDLAKKYICTYINV-----QERD---PKAHRFLGLLYELEENTDKAVECYRRSVEL--------NPTQ 98 (150)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHcCchHHHHHHHHHHHHh--------CCCC
Confidence 34566778899999999999999864 3555 567889999999999999999999999975 3444
Q ss_pred HHHHHHHHHHHHHcCCHHHHHH-HHHHHHHHHHHhcCCCCchHHHHHHHHH
Q 012772 392 GLQYYTCGKLEWFLGDTENAIK-SMTEAVEILRITHGTNSPFMKELILKLE 441 (456)
Q Consensus 392 ~~~l~~La~~~~~~g~~~eA~~-~l~~Al~i~~~~~G~~h~~~~~~~~~l~ 441 (456)
...+++||.++..+|++++|.+ ++++|+++ -|+||.+..+...|-
T Consensus 99 ~~~~~~la~~~~~~~~~~~aa~~~~~~al~l-----~P~~~~~~~l~~~ll 144 (150)
T 4ga2_A 99 KDLVLKIAELLCKNDVTDGRAKYWVERAAKL-----FPGSPAVYKLKEQLL 144 (150)
T ss_dssp HHHHHHHHHHHHHHCSSSSHHHHHHHHHHHH-----STTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHh-----CcCCHHHHHHHHHHH
Confidence 5679999999999999987665 46899875 578888766655543
No 58
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.60 E-value=1.5e-06 Score=82.06 Aligned_cols=128 Identities=16% Similarity=0.125 Sum_probs=104.8
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCcc-HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCC
Q 012772 310 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN-LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 388 (456)
Q Consensus 310 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~-~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~h 388 (456)
.+...+..+...|++++|+..+++++.. .|.++. ...++..++.++...|++++|++++++++.+.+.. +++
T Consensus 7 ~l~~~g~~~~~~g~~~~A~~~~~~al~~-----~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~ 79 (338)
T 3ro2_A 7 ELALEGERLCKSGDCRAGVSFFEAAVQV-----GTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI--GDQ 79 (338)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhh-----CcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcc--ccc
Confidence 4455667778899999999999999864 455544 46888999999999999999999999999998876 678
Q ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHH
Q 012772 389 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAE 446 (456)
Q Consensus 389 p~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~e 446 (456)
|..+..+..+|.++..+|++++|+.++++|+++.... .+++....+...++.+...
T Consensus 80 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~ 135 (338)
T 3ro2_A 80 LGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL--NDKVGEARALYNLGNVYHA 135 (338)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh--cCchHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999998875 2444445555555555443
No 59
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.60 E-value=8.9e-07 Score=87.33 Aligned_cols=130 Identities=11% Similarity=0.051 Sum_probs=107.7
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCCh
Q 012772 310 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 389 (456)
Q Consensus 310 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp 389 (456)
.....+..+...|++++|++.+++++++.... +.......++..++.+|..+|++++|+.++++++.+.... .+++
T Consensus 225 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~ 300 (411)
T 4a1s_A 225 ACGNLGNTYYLLGDFQAAIEHHQERLRIAREF--GDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVEL--GERE 300 (411)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHhc--CCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHc--CCHH
Confidence 33455666778999999999999999886653 3455677889999999999999999999999999998865 6677
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHH
Q 012772 390 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 445 (456)
Q Consensus 390 ~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~ 445 (456)
..+..+..+|.++..+|++++|+.++++|+++.... .+++....++..|+.+..
T Consensus 301 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~ 354 (411)
T 4a1s_A 301 VEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQEL--GDRIGEARACWSLGNAHS 354 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHC--CChHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999998876 245555666666666643
No 60
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.60 E-value=6.4e-07 Score=83.03 Aligned_cols=118 Identities=8% Similarity=0.041 Sum_probs=100.4
Q ss_pred cCChHHHHHHHHHHHHHHHhhcCCCCccHHHHH--------------HHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCC
Q 012772 321 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTR--------------EKLIKILMELEDWKEALAYCQLTIPVYQRVYPQ 386 (456)
Q Consensus 321 ~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~--------------~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~ 386 (456)
+|++++|+..+++++.. .|+++....+. ..++.+|..+|+|++|+..+++++.. -|
T Consensus 110 ~~~~~~A~~~~~~~l~~-----~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~-----~p 179 (261)
T 3qky_A 110 QTDTRKAIEAFQLFIDR-----YPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDA-----YP 179 (261)
T ss_dssp CHHHHHHHHHHHHHHHH-----CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CT
T ss_pred chhHHHHHHHHHHHHHH-----CcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH-----CC
Confidence 78999999999998764 47777777666 88899999999999999999998863 25
Q ss_pred CChHHHHHHHHHHHHHHHc----------CCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHhhhcc
Q 012772 387 FHPLLGLQYYTCGKLEWFL----------GDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASYKLSS 453 (456)
Q Consensus 387 ~hp~~~~~l~~La~~~~~~----------g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~e~~~~~~~ 453 (456)
+++.....++.+|.++..+ |++++|+..|+++++.. |+|+.+......|+.+..++...+++
T Consensus 180 ~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~-----p~~~~~~~a~~~l~~~~~~~~~~~~~ 251 (261)
T 3qky_A 180 DTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIF-----PDSPLLRTAEELYTRARQRLTELEGD 251 (261)
T ss_dssp TSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHC-----TTCTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHC-----CCChHHHHHHHHHHHHHHHHHHhhhh
Confidence 6777888999999999977 88999999999988754 79999999999999998888776654
No 61
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.60 E-value=1.9e-06 Score=69.45 Aligned_cols=114 Identities=17% Similarity=0.155 Sum_probs=88.2
Q ss_pred HHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCC
Q 012772 308 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 387 (456)
Q Consensus 308 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~ 387 (456)
.......+..+...|++++|++.+++++.. .|.+ ..++..++.++...|++++|++++++++..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-------- 75 (131)
T 2vyi_A 12 AERLKTEGNEQMKVENFEAAVHFYGKAIEL-----NPAN---AVYFCNRAAAYSKLGNYAGAVQDCERAICI-------- 75 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------
T ss_pred hHHHHHHHHHHHHccCHHHHHHHHHHHHHc-----CCCC---HHHHHHHHHHHHHhhchHHHHHHHHHHHhc--------
Confidence 344455666777889999999999998764 3433 567789999999999999999999999874
Q ss_pred ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHH
Q 012772 388 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 445 (456)
Q Consensus 388 hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~ 445 (456)
+|.....++.+|.++..+|++++|.+.+++++++ .|+++. ....++.+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~---~~~~l~~~~~ 125 (131)
T 2vyi_A 76 DPAYSKAYGRMGLALSSLNKHVEAVAYYKKALEL-----DPDNET---YKSNLKIAEL 125 (131)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTCHH---HHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc-----CccchH---HHHHHHHHHH
Confidence 2333567899999999999999999999999986 445543 3444444443
No 62
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.59 E-value=2e-06 Score=77.15 Aligned_cols=106 Identities=12% Similarity=0.141 Sum_probs=84.9
Q ss_pred HHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHH----------------HHHHHHHccCHHHHHH
Q 012772 308 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREK----------------LIKILMELEDWKEALA 371 (456)
Q Consensus 308 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~----------------L~~~~~~~g~~~~A~~ 371 (456)
+..++..+..+...|++++|+..+++++... |+ -..++.. ++.+|..+|++++|+.
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-----p~---~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~ 75 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALN-----ID---RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYL 75 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----HH---HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-----CC---ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHH
Confidence 3455667777888999999999999998652 22 2334444 9999999999999999
Q ss_pred HHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHH
Q 012772 372 YCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMK 434 (456)
Q Consensus 372 ~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~ 434 (456)
++++++.+ +|.-...++.+|.++..+|++++|+..|++|+++ .|+++...
T Consensus 76 ~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-----~P~~~~a~ 125 (208)
T 3urz_A 76 FYKELLQK--------APNNVDCLEACAEMQVCRGQEKDALRMYEKILQL-----EADNLAAN 125 (208)
T ss_dssp HHHHHHHH--------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTCHHHH
T ss_pred HHHHHHHH--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-----CCCCHHHH
Confidence 99999874 3444678999999999999999999999999986 46666543
No 63
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.58 E-value=1.1e-06 Score=71.56 Aligned_cols=95 Identities=16% Similarity=0.170 Sum_probs=78.6
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChH
Q 012772 311 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 390 (456)
Q Consensus 311 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~ 390 (456)
....+..+...|++++|++.+++++.. .|.+ ..++..++.++..+|++++|+.++++++.. .|.
T Consensus 19 ~~~~~~~~~~~~~~~~A~~~~~~al~~-----~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~a~~~--------~~~ 82 (133)
T 2lni_A 19 VKNKGNECFQKGDYPQAMKHYTEAIKR-----NPKD---AKLYSNRAACYTKLLEFQLALKDCEECIQL--------EPT 82 (133)
T ss_dssp HHHHHHHHHHTTCSHHHHHHHHHHHTT-----CTTC---HHHHHHHHHHHTTTTCHHHHHHHHHHHHHH--------CTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHc-----CCCc---HHHHHHHHHHHHHhccHHHHHHHHHHHHHh--------CCC
Confidence 344555667789999999999988643 3433 567889999999999999999999999874 233
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 391 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 391 ~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
....++.+|.++..+|++++|++++++++++
T Consensus 83 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 83 FIKGYTRKAAALEAMKDYTKAMDVYQKALDL 113 (133)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 4567899999999999999999999999986
No 64
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.58 E-value=2.7e-07 Score=93.00 Aligned_cols=98 Identities=8% Similarity=-0.114 Sum_probs=85.1
Q ss_pred CccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcC-CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q 012772 346 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYP-QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 424 (456)
Q Consensus 346 h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g-~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~ 424 (456)
+...+.+++.||.++..+|++++|++++++++++.+...+ ..||..+..+.++|.+|..+|++++|+.++++|++|...
T Consensus 47 ~~~~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~ 126 (472)
T 4g1t_A 47 REFKATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEK 126 (472)
T ss_dssp ---CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHh
Confidence 3345677889999999999999999999999999998887 569999999999999999999999999999999999999
Q ss_pred hcCCCCchHHHHHHHHHHH
Q 012772 425 THGTNSPFMKELILKLEEA 443 (456)
Q Consensus 425 ~~G~~h~~~~~~~~~l~~~ 443 (456)
..++.++...++...++.+
T Consensus 127 ~~~~~~~~~~~~~~~~g~~ 145 (472)
T 4g1t_A 127 FSSPYRIESPELDCEEGWT 145 (472)
T ss_dssp SCCSSCCCCHHHHHHHHHH
T ss_pred cccccchhhHHHHHHHHHH
Confidence 9888887777666655433
No 65
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=98.58 E-value=1.3e-08 Score=95.46 Aligned_cols=63 Identities=27% Similarity=0.336 Sum_probs=44.7
Q ss_pred ccccccCCCcCCCeeE--EeCC--EEEEEEecCCCCCCcccCChhhHHHhhCCccccC--CCCCCCccc
Q 012772 218 VISIINHSCLPNAVLV--FEGR--LAVVRAVQHVPKGAEGQFDDIQESAILEGYRCKD--DGCSGFLLR 280 (456)
Q Consensus 218 ~~sl~NHSC~PN~~~~--f~~~--~~~vra~~~I~~Gee~~~~~~r~~~l~~~f~C~C--~~C~~~~~~ 280 (456)
.+.++||||.||+... +.++ ++.+.|+|+|++||||||+|.-...-...|.|.| ..|.+.+..
T Consensus 190 ~aRFiNHSC~PN~~~~~~~v~g~~ri~~fA~RdI~~GEELT~dY~~~~~~~~~~~C~CGs~~Crg~l~~ 258 (278)
T 3h6l_A 190 CSRFMNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGSELTFDYQFQRYGKEAQKCFCGSANCRGYLGG 258 (278)
T ss_dssp GGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTTEECSSCEECCCCCTTCCSEECC
T ss_pred hhhhcccCCCCCceeEEEEeCCceEEEEEECCccCCCCEEEEecCCCcCCCCCcEeECCCCCCeeecCC
Confidence 3567899999997654 3443 6889999999999999976642211123688877 468877643
No 66
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=98.57 E-value=2.4e-08 Score=90.82 Aligned_cols=63 Identities=27% Similarity=0.364 Sum_probs=44.6
Q ss_pred ccccccCCCcCCCeeEE--eC--CEEEEEEecCCCCCCcccCChhhHH-HhhCCccccCC--CCCCCccc
Q 012772 218 VISIINHSCLPNAVLVF--EG--RLAVVRAVQHVPKGAEGQFDDIQES-AILEGYRCKDD--GCSGFLLR 280 (456)
Q Consensus 218 ~~sl~NHSC~PN~~~~f--~~--~~~~vra~~~I~~Gee~~~~~~r~~-~l~~~f~C~C~--~C~~~~~~ 280 (456)
.+.++||||.||+...+ .+ .++.+.|+|+|++|||||+++.... ....+|.|.|- .|.+.+..
T Consensus 146 ~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~~~~~~C~CGs~~Crg~i~~ 215 (222)
T 3ope_A 146 EARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNVEKQQLCKCGFEKCRGIIGG 215 (222)
T ss_dssp GGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECTTSSBCCCSCCCBCCCCCTTCCSBCC-
T ss_pred cceeeccCCCCCeEeEEEEECCeEEEEEEECCccCCCCEEEEECCCcccCCcCCCEeeCCCcCCCCccCC
Confidence 35578999999998764 33 3789999999999999997664211 11236877765 58887643
No 67
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.57 E-value=3.7e-07 Score=97.62 Aligned_cols=97 Identities=22% Similarity=0.292 Sum_probs=83.8
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCC
Q 012772 309 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 388 (456)
Q Consensus 309 ~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~h 388 (456)
+.+...+..+..+|++++|++.|++++++ .|+ ...++.+||.+|..+|++++|++++++++++ .
T Consensus 10 ~al~nLG~~~~~~G~~~eAi~~~~kAl~l-----~P~---~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l--------~ 73 (723)
T 4gyw_A 10 DSLNNLANIKREQGNIEEAVRLYRKALEV-----FPE---FAAAHSNLASVLQQQGKLQEALMHYKEAIRI--------S 73 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSC---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------C
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------C
Confidence 34455666778899999999999999875 243 4678899999999999999999999999975 4
Q ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 389 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 389 p~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
|..+..+++||.++..+|++++|++.|++|+++
T Consensus 74 P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l 106 (723)
T 4gyw_A 74 PTFADAYSNMGNTLKEMQDVQGALQCYTRAIQI 106 (723)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 566778999999999999999999999999986
No 68
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.56 E-value=9.9e-07 Score=84.22 Aligned_cols=110 Identities=10% Similarity=0.022 Sum_probs=89.4
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChH
Q 012772 311 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 390 (456)
Q Consensus 311 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~ 390 (456)
+...+..+..+|++++|+..+++++.+.... + +....+.++.+++.+|.. |++++|++++++++.+++.. ...+.
T Consensus 79 ~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~-g-~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~--~~~~~ 153 (307)
T 2ifu_A 79 FEQAGMMLKDLQRMPEAVQYIEKASVMYVEN-G-TPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENE--ERLRQ 153 (307)
T ss_dssp HHHHHHHHHHTTCGGGGHHHHHHHHHHHHTT-T-CHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHT--TCHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhC--CChhH
Confidence 3444556677899999999999999886542 2 223467888999999988 99999999999999988762 34456
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Q 012772 391 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 425 (456)
Q Consensus 391 ~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~ 425 (456)
.+..++++|.++..+|++++|+.+|++|+++....
T Consensus 154 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 154 AAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 67899999999999999999999999999998764
No 69
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.56 E-value=1.7e-06 Score=84.62 Aligned_cols=127 Identities=16% Similarity=0.135 Sum_probs=104.4
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCcc-HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCCh
Q 012772 311 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN-LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 389 (456)
Q Consensus 311 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~-~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp 389 (456)
+...+..+...|++++|+..+++++.+ .|.++. ...++..++.++...|++++|+.++++++.+.+.. .++|
T Consensus 12 l~~~g~~~~~~g~~~~A~~~~~~al~~-----~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~ 84 (406)
T 3sf4_A 12 LALEGERLCKSGDCRAGVSFFEAAVQV-----GTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI--GDQL 84 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhc-----CcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc--cccH
Confidence 345566677889999999999999865 455544 57889999999999999999999999999998876 6788
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHH
Q 012772 390 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAE 446 (456)
Q Consensus 390 ~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~e 446 (456)
..+..++.+|.++..+|++++|+.++++|+++..... +++....+...++.+...
T Consensus 85 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~~~~ 139 (406)
T 3sf4_A 85 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN--DKVGEARALYNLGNVYHA 139 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcc--cccchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998762 344555555555555433
No 70
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.55 E-value=1.6e-06 Score=84.81 Aligned_cols=126 Identities=15% Similarity=0.089 Sum_probs=81.0
Q ss_pred HHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHH
Q 012772 313 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 392 (456)
Q Consensus 313 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~ 392 (456)
..+..+...|++++|+..+++++.+..+. +++.....++.+++.+|..+|++++|+.++++++.+.... ++++..+
T Consensus 192 ~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~ 267 (406)
T 3sf4_A 192 NLGNTHYLLGNFRDAVIAHEQRLLIAKEF--GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQL--KDRAVEA 267 (406)
T ss_dssp HHHHHHHHHTBHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHHHHhc--CCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhC--cCchHHH
Confidence 34444556677777777777777665442 3445566677777777777777777777777777766543 3556667
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Q 012772 393 LQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQ 444 (456)
Q Consensus 393 ~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~ 444 (456)
..+..+|.++..+|++++|+.++++|+++....- +++....+...++.+.
T Consensus 268 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~la~~~ 317 (406)
T 3sf4_A 268 QSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELN--DRIGEGRACWSLGNAY 317 (406)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcC--CcHHHHHHHHHHHHHH
Confidence 7777777777777777777777777777766541 2344444444554443
No 71
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.55 E-value=1.7e-06 Score=84.38 Aligned_cols=110 Identities=12% Similarity=0.077 Sum_probs=94.9
Q ss_pred HHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHH
Q 012772 313 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 392 (456)
Q Consensus 313 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~ 392 (456)
..+..+..+|++++|+..+++++.+.... .+......++.+++.++..+|++++|+.++++++.+.+..-++.+|..+
T Consensus 58 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~ 135 (373)
T 1hz4_A 58 VLGEVLHCKGELTRSLALMQQTEQMARQH--DVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHE 135 (373)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHH
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHhc--CcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHH
Confidence 34455667899999999999998876542 2334557778899999999999999999999999999988777889999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q 012772 393 LQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 424 (456)
Q Consensus 393 ~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~ 424 (456)
..+..+|.++..+|++++|+.++++|+++...
T Consensus 136 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 136 FLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999998765
No 72
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.55 E-value=4.7e-07 Score=73.92 Aligned_cols=94 Identities=11% Similarity=-0.062 Sum_probs=77.3
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHH
Q 012772 312 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 391 (456)
Q Consensus 312 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~ 391 (456)
...+..+...|++++|+..+++++.. .|++ ..++..++.++..+|++++|+..+++++.+ .|++
T Consensus 21 ~~~g~~~~~~g~~~~A~~~~~~al~~-----~P~~---~~a~~~lg~~~~~~g~~~~A~~~~~~al~l-----~P~~--- 84 (121)
T 1hxi_A 21 MEEGLSMLKLANLAEAALAFEAVCQK-----EPER---EEAWRSLGLTQAENEKDGLAIIALNHARML-----DPKD--- 84 (121)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---
Confidence 34455667789999999999999764 3444 567789999999999999999999999864 2344
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 392 GLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 392 ~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
...++.||.++..+|++++|+..|++++++
T Consensus 85 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 114 (121)
T 1hxi_A 85 IAVHAALAVSHTNEHNANAALASLRAWLLS 114 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 447899999999999999999999999875
No 73
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.55 E-value=1.3e-06 Score=84.82 Aligned_cols=101 Identities=13% Similarity=0.191 Sum_probs=85.0
Q ss_pred HHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCC------------ccHHHHHHHHHHHHHHccCHHHHHHHHHH
Q 012772 308 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFS------------VNLMQTREKLIKILMELEDWKEALAYCQL 375 (456)
Q Consensus 308 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h------------~~~~~~~~~L~~~~~~~g~~~~A~~~~~~ 375 (456)
.......+..+..+|++++|+..|++++.+. |.+ +....++.+++.+|..+|+|++|+.++++
T Consensus 147 a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~-----p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 221 (336)
T 1p5q_A 147 STIVKERGTVYFKEGKYKQALLQYKKIVSWL-----EYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNK 221 (336)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHT-----TTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHh-----hccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 4445566777788999999999999998753 333 23468889999999999999999999999
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 376 TIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 376 ~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
++.+ .|.....++++|.++..+|++++|+..|++|+++
T Consensus 222 al~~--------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l 259 (336)
T 1p5q_A 222 ALEL--------DSNNEKGLSRRGEAHLAVNDFELARADFQKVLQL 259 (336)
T ss_dssp HHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHh--------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 9975 3445678999999999999999999999999986
No 74
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.53 E-value=2.1e-06 Score=81.08 Aligned_cols=129 Identities=15% Similarity=0.088 Sum_probs=106.0
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHH
Q 012772 312 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 391 (456)
Q Consensus 312 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~ 391 (456)
...+..+...|++++|++.+++++.+..+. +++.....++..++.++..+|++++|+.++++++.+.... .+++..
T Consensus 187 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~ 262 (338)
T 3ro2_A 187 GNLGNTHYLLGNFRDAVIAHEQRLLIAKEF--GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQL--KDRAVE 262 (338)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TCHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhh--cchhHH
Confidence 345556677899999999999998876553 4556678899999999999999999999999999988764 567888
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHH
Q 012772 392 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAE 446 (456)
Q Consensus 392 ~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~e 446 (456)
+..+..+|.++..+|++++|..++++|+++....- +++....+...|+.+...
T Consensus 263 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~la~~~~~ 315 (338)
T 3ro2_A 263 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELK--DRIGEGRACWSLGNAYTA 315 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999987762 345555566666666443
No 75
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.52 E-value=4.5e-06 Score=66.61 Aligned_cols=94 Identities=22% Similarity=0.317 Sum_probs=76.8
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHH
Q 012772 312 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 391 (456)
Q Consensus 312 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~ 391 (456)
...+..+...|++++|++.+++++.. .|.+ ..++..++.++...|++++|+.++++++.. +|..
T Consensus 13 ~~~~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--------~~~~ 76 (125)
T 1na0_A 13 YNLGNAYYKQGDYDEAIEYYQKALEL-----DPNN---AEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPNN 76 (125)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH-----CcCc---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--------CCcc
Confidence 34455567789999999999988754 2333 456788999999999999999999998864 2333
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 392 GLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 392 ~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
...++.+|.++...|++++|..++++++++
T Consensus 77 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 106 (125)
T 1na0_A 77 AEAWYNLGNAYYKQGDYDEAIEYYQKALEL 106 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 567889999999999999999999999876
No 76
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.50 E-value=3.4e-07 Score=77.76 Aligned_cols=103 Identities=17% Similarity=0.120 Sum_probs=79.0
Q ss_pred hhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 012772 318 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYT 397 (456)
Q Consensus 318 ~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~ 397 (456)
+.++|++++|++.++++. +.++.-......||.+|..+|+|++|++++++++.+ +|.-...++.
T Consensus 7 ~~~~~~~e~ai~~~~~a~--------~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~--------~p~~~~a~~~ 70 (150)
T 4ga2_A 7 RRSKADVERYIASVQGST--------PSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINV--------QERDPKAHRF 70 (150)
T ss_dssp CCCHHHHHHHHHHHHHHS--------CSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHH
T ss_pred HHHcChHHHHHHHHHHhc--------ccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHH
Confidence 445677788887776664 234444556678999999999999999999999975 4455678999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Q 012772 398 CGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQ 444 (456)
Q Consensus 398 La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~ 444 (456)
||.++..+|++++|+..|++|+++ .|+++. +...|+.+.
T Consensus 71 lg~~~~~~~~~~~A~~~~~~al~~-----~p~~~~---~~~~la~~~ 109 (150)
T 4ga2_A 71 LGLLYELEENTDKAVECYRRSVEL-----NPTQKD---LVLKIAELL 109 (150)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHH---HHHHHHHHH
T ss_pred HHHHHHHcCchHHHHHHHHHHHHh-----CCCCHH---HHHHHHHHH
Confidence 999999999999999999999986 455554 344444443
No 77
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.50 E-value=2.2e-06 Score=81.16 Aligned_cols=109 Identities=16% Similarity=0.105 Sum_probs=88.5
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHc-cCHHHHHHHHHHHHHHHHHhcCCCC
Q 012772 310 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL-EDWKEALAYCQLTIPVYQRVYPQFH 388 (456)
Q Consensus 310 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~-g~~~~A~~~~~~~l~~~e~~~g~~h 388 (456)
.....+..+...|++++|+..+++++.+.... | +....+.++.+++.+|..+ |++++|+.++++++.+.... ..+
T Consensus 79 ~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~-g-~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~--~~~ 154 (292)
T 1qqe_A 79 TYVEAYKCFKSGGNSVNAVDSLENAIQIFTHR-G-QFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQD--QSV 154 (292)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT--TCH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhC--CCh
Confidence 34455666778899999999999999886542 2 2333577889999999996 99999999999999987642 233
Q ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 012772 389 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 422 (456)
Q Consensus 389 p~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~ 422 (456)
+..+..+.++|.++..+|++++|+.+|++|+++.
T Consensus 155 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 188 (292)
T 1qqe_A 155 ALSNKCFIKCADLKALDGQYIEASDIYSKLIKSS 188 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 4456789999999999999999999999999864
No 78
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.50 E-value=7.3e-07 Score=73.38 Aligned_cols=90 Identities=12% Similarity=0.093 Sum_probs=74.6
Q ss_pred cHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcC
Q 012772 348 NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHG 427 (456)
Q Consensus 348 ~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G 427 (456)
..+.+..+||.++..+|+|++|++++.+++.+ +|..+..++++|.++..+|++++|+..+++|+++-.. ..
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~--------~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~-~~ 76 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVHYDKAIEL--------DPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRE-TR 76 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcc-cc
Confidence 34567789999999999999999999999975 4555778999999999999999999999999998765 45
Q ss_pred CCCchHHHHHHHHHHHHHH
Q 012772 428 TNSPFMKELILKLEEAQAE 446 (456)
Q Consensus 428 ~~h~~~~~~~~~l~~~~~e 446 (456)
..++....++..++.+...
T Consensus 77 ~~~~~~a~~~~~lg~~~~~ 95 (127)
T 4gcn_A 77 ADYKLIAKAMSRAGNAFQK 95 (127)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHH
Confidence 5667777777777766543
No 79
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.49 E-value=1.4e-06 Score=84.61 Aligned_cols=116 Identities=14% Similarity=0.139 Sum_probs=89.0
Q ss_pred HHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHH
Q 012772 313 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 392 (456)
Q Consensus 313 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~ 392 (456)
..+..+...|++++|++.+++++++ .|.+ ..++..++.+|..+|++++|+.++++++.+ +|...
T Consensus 218 ~l~~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~ 281 (365)
T 4eqf_A 218 GLGVLFHLSGEFNRAIDAFNAALTV-----RPED---YSLWNRLGATLANGDRSEEAVEAYTRALEI--------QPGFI 281 (365)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCch
Confidence 3455566789999999999999764 3444 557889999999999999999999999875 45557
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchH----HHHHHHHHHHH
Q 012772 393 LQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM----KELILKLEEAQ 444 (456)
Q Consensus 393 ~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~----~~~~~~l~~~~ 444 (456)
..+++||.++..+|++++|+.+|++|+++.....|++++.. ..+...|..+.
T Consensus 282 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 337 (365)
T 4eqf_A 282 RSRYNLGISCINLGAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIAL 337 (365)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHH
Confidence 88999999999999999999999999999999888776544 34445555543
No 80
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.48 E-value=1.1e-06 Score=89.64 Aligned_cols=101 Identities=14% Similarity=0.098 Sum_probs=84.9
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 012772 314 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 393 (456)
Q Consensus 314 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~ 393 (456)
.|..+..+|++++|++.|++++++ .|. ...++.+++.+|..+|+|++|++++++++.+ +|..+.
T Consensus 12 lg~~~~~~g~~~~A~~~~~~Al~~-----~p~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l--------~p~~~~ 75 (477)
T 1wao_1 12 QANDYFKAKDYENAIKFYSQAIEL-----NPS---NAIYYGNRSLAYLRTECYGYALGDATRAIEL--------DKKYIK 75 (477)
T ss_dssp SSSSTTTTTCHHHHHHHHHHHHHH-----CTT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS--------CTTCHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHh-----CCc---cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CCCCHH
Confidence 344567789999999999999875 333 3778899999999999999999999999975 566678
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHH
Q 012772 394 QYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKE 435 (456)
Q Consensus 394 ~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~ 435 (456)
.++++|.++..+|++++|++.|++|+++ .|+++....
T Consensus 76 ~~~~lg~~~~~~g~~~eA~~~~~~al~~-----~p~~~~~~~ 112 (477)
T 1wao_1 76 GYYRRAASNMALGKFRAALRDYETVVKV-----KPHDKDAKM 112 (477)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHH-----STTCTTHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHH
Confidence 8999999999999999999999999987 455655443
No 81
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=98.47 E-value=4.9e-08 Score=84.84 Aligned_cols=39 Identities=26% Similarity=0.163 Sum_probs=32.0
Q ss_pred cccccCCCcCCCeeE--EeC--CEEEEEEecCCCCCCcccCCh
Q 012772 219 ISIINHSCLPNAVLV--FEG--RLAVVRAVQHVPKGAEGQFDD 257 (456)
Q Consensus 219 ~sl~NHSC~PN~~~~--f~~--~~~~vra~~~I~~Gee~~~~~ 257 (456)
+.++||||.|||... +.+ .++.+.|+|+|++|||||+++
T Consensus 108 aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY 150 (166)
T 3f9x_A 108 GRLINHSKCGNCQTKLHDIDGVPHLILIASRDIAAGEELLFDY 150 (166)
T ss_dssp GGGCEECTTCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECC
T ss_pred hheeecCCCCCeeEEEEEECCeeEEEEEECCcCCCCCEEEEEc
Confidence 567999999998765 344 368899999999999998654
No 82
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.46 E-value=2.9e-06 Score=85.92 Aligned_cols=107 Identities=16% Similarity=0.248 Sum_probs=85.9
Q ss_pred HHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcC-------CCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Q 012772 307 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYH-------PFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPV 379 (456)
Q Consensus 307 ~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~-------p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~ 379 (456)
........+..+..+|+|++|+..|++++.+....-. ..+.....++.+++.+|..+|+|++|+.++.++|.+
T Consensus 267 ~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 346 (457)
T 1kt0_A 267 QAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGL 346 (457)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 3445566777788899999999999999875421100 001234788899999999999999999999999975
Q ss_pred HHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 380 YQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 380 ~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
+|.....++++|.++..+|++++|+..|++|+++
T Consensus 347 --------~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l 380 (457)
T 1kt0_A 347 --------DSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEV 380 (457)
T ss_dssp --------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred --------CCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 3444678999999999999999999999999986
No 83
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.44 E-value=2.8e-06 Score=76.99 Aligned_cols=119 Identities=17% Similarity=0.141 Sum_probs=93.1
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCCh
Q 012772 310 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 389 (456)
Q Consensus 310 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp 389 (456)
.....+..+...|++++|+..+++++. ..|.++....++..++.+|..+|+|++|+..+++++.. + |.++
T Consensus 6 ~~~~~a~~~~~~g~~~~A~~~~~~~~~-----~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~----~-P~~~ 75 (225)
T 2yhc_A 6 EIYATAQQKLQDGNWRQAITQLEALDN-----RYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRL----N-PTHP 75 (225)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHH-----HCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----C-TTCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH-----hCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH----C-cCCC
Confidence 345566677788999999999999875 35778888889999999999999999999999998853 3 5677
Q ss_pred HHHHHHHHHHHHHHH------------------cCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH
Q 012772 390 LLGLQYYTCGKLEWF------------------LGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEA 443 (456)
Q Consensus 390 ~~~~~l~~La~~~~~------------------~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~ 443 (456)
.....++.+|.++.. +|++++|+..|+++++. -|+++........+..+
T Consensus 76 ~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~-----~P~~~~a~~a~~~l~~~ 142 (225)
T 2yhc_A 76 NIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRG-----YPNSQYTTDATKRLVFL 142 (225)
T ss_dssp THHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTT-----CTTCTTHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHH-----CcCChhHHHHHHHHHHH
Confidence 777888888988875 56788888888887654 36777666555444443
No 84
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=98.42 E-value=2.1e-07 Score=87.72 Aligned_cols=58 Identities=24% Similarity=0.340 Sum_probs=41.4
Q ss_pred cccccCCCcCCCeeE--Ee-C-----CEEEEEEecCCCCCCcccCChhhH--HHhhCCccccC--CCCCC
Q 012772 219 ISIINHSCLPNAVLV--FE-G-----RLAVVRAVQHVPKGAEGQFDDIQE--SAILEGYRCKD--DGCSG 276 (456)
Q Consensus 219 ~sl~NHSC~PN~~~~--f~-~-----~~~~vra~~~I~~Gee~~~~~~r~--~~l~~~f~C~C--~~C~~ 276 (456)
+.++||||.||+... +. + .++.+.|+|+|++|||||++|-.. +....+|.|.| +.|.+
T Consensus 217 aRFiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~RdI~~GEELT~dYg~~~~~~~~~~~~C~CGs~~CRg 286 (287)
T 3hna_A 217 SRFINHHCEPNLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLGFDYGERFWDIKGKLFSCRCGSPKCRH 286 (287)
T ss_dssp GGGCEECSSCSEEEEEEESSCCCTTCCEEEEEESSCBCTTCBCEECCCHHHHHHHTTTCCCCCCCTTCSC
T ss_pred hheeeecCCCCceeEEEEEecCCCCceeEEEEEcceeCCCCeEEEeCCCcccccCCCcCEeeCCCCCCCC
Confidence 457799999999753 32 1 389999999999999999766422 22234788877 44543
No 85
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.42 E-value=7.9e-06 Score=76.96 Aligned_cols=98 Identities=13% Similarity=0.135 Sum_probs=83.0
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCCh
Q 012772 310 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 389 (456)
Q Consensus 310 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp 389 (456)
.+...+..+..+|++++|+..|++++.. .|.+ ..++.+++.+|..+|+|++|+.++++++.+ +|
T Consensus 6 ~~~~~g~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~la~~~~~~~~~~~A~~~~~~al~~--------~p 69 (281)
T 2c2l_A 6 ELKEQGNRLFVGRKYPEAAACYGRAITR-----NPLV---AVYYTNRALCYLKMQQPEQALADCRRALEL--------DG 69 (281)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHTTS--------CT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCcc---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CC
Confidence 3455666778899999999999999864 3444 567789999999999999999999999853 45
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 012772 390 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILR 423 (456)
Q Consensus 390 ~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~ 423 (456)
.....++.+|.++..+|++++|+..|++|+++--
T Consensus 70 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 70 QSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 5567899999999999999999999999998765
No 86
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=98.40 E-value=1.2e-07 Score=89.61 Aligned_cols=62 Identities=21% Similarity=0.355 Sum_probs=45.3
Q ss_pred ccccccCCCcCCCeeEE---eC--CEEEEEEecCCCCCCcccCChhhH----------HHh---hCCccccC--CCCCCC
Q 012772 218 VISIINHSCLPNAVLVF---EG--RLAVVRAVQHVPKGAEGQFDDIQE----------SAI---LEGYRCKD--DGCSGF 277 (456)
Q Consensus 218 ~~sl~NHSC~PN~~~~f---~~--~~~~vra~~~I~~Gee~~~~~~r~----------~~l---~~~f~C~C--~~C~~~ 277 (456)
.+.++||||.||+.... ++ .++.++|+|+|++|||||+++... +.+ ...|.|.| +.|.+.
T Consensus 205 ~arfiNHSC~PN~~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~~~~~~~~~~~~C~CGs~~CrG~ 284 (290)
T 3bo5_A 205 IGRFLNHSCEPNLLMIPVRIDSMVPKLALFAAKDIVPEEELSYDYSGRYLNLTVSASKERLDHGKLRKPCYCGAKSCTAF 284 (290)
T ss_dssp GGGGCEECSSCSEEEEEEESSSSSCEEEEEESSCBCTTCEEEECTTSCTTCCSSSEEEEEEECSSCCCBCCCCCTTCCSB
T ss_pred chheeeecCCCCEEEEEEEeCCCceEEEEEEccccCCCCEEEEECCCccccccccccccccccCCCCccccCCCcCCCcc
Confidence 45689999999998753 33 589999999999999998665321 111 23578888 578886
Q ss_pred cc
Q 012772 278 LL 279 (456)
Q Consensus 278 ~~ 279 (456)
+.
T Consensus 285 l~ 286 (290)
T 3bo5_A 285 LP 286 (290)
T ss_dssp CC
T ss_pred CC
Confidence 63
No 87
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.39 E-value=5.2e-06 Score=80.26 Aligned_cols=121 Identities=17% Similarity=0.180 Sum_probs=95.2
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHH
Q 012772 312 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 391 (456)
Q Consensus 312 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~ 391 (456)
...+..+...|++++|+..+++++.+ .|.+ ..++..++.++..+|++++|+.++++++.+ +|..
T Consensus 221 ~~l~~~~~~~g~~~~A~~~~~~al~~-----~~~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~~~~ 284 (368)
T 1fch_A 221 CGLGVLFNLSGEYDKAVDCFTAALSV-----RPND---YLLWNKLGATLANGNQSEEAVAAYRRALEL--------QPGY 284 (368)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh-----CcCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCc
Confidence 34455567789999999999998764 3444 567889999999999999999999999875 3555
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCC---CCchHHHHHHHHHHHHHHHH
Q 012772 392 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGT---NSPFMKELILKLEEAQAEAS 448 (456)
Q Consensus 392 ~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~---~h~~~~~~~~~l~~~~~e~~ 448 (456)
...++.+|.++..+|++++|+.+|++|+++.....|+ .++....+...|+.+...+.
T Consensus 285 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 344 (368)
T 1fch_A 285 IRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLG 344 (368)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhC
Confidence 6789999999999999999999999999988766443 34556677777777765443
No 88
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=98.38 E-value=1.1e-07 Score=90.64 Aligned_cols=60 Identities=35% Similarity=0.592 Sum_probs=33.4
Q ss_pred ccccccCCCcCCCeeEEe-C-------CEEEEEEecCCCCCCcccCChhhH-----------HHhhCCccccC--CCCCC
Q 012772 218 VISIINHSCLPNAVLVFE-G-------RLAVVRAVQHVPKGAEGQFDDIQE-----------SAILEGYRCKD--DGCSG 276 (456)
Q Consensus 218 ~~sl~NHSC~PN~~~~f~-~-------~~~~vra~~~I~~Gee~~~~~~r~-----------~~l~~~f~C~C--~~C~~ 276 (456)
.+.++||||.||+..... + .++.+.|+|+|++||||||++... ..+...+.|.| +.|.+
T Consensus 220 ~arfiNHSC~PN~~~~~~~~~~~~~~~~~i~~~A~rdI~~GeELt~dY~~~~~~~~~~~~~~~k~~~~~~C~CGs~~Crg 299 (302)
T 1ml9_A 220 PTRFINHSCDPNMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFDYVNGLTGLESDAHDPSKISEMTKCLCGTAKCRG 299 (302)
T ss_dssp GGGGCEECSSCSEEEEEEESSGGGGGGCEEEEEESSCBCTTCEEEECTTC------------------------------
T ss_pred HHHhcccCCCCCeeEEEEEeccCCCCceEEEEEECCCcCCCCEEEEEECCCccccccccccccccCCCcEeeCCCCcCcc
Confidence 457899999999976532 2 379999999999999999665311 01223578877 46766
Q ss_pred C
Q 012772 277 F 277 (456)
Q Consensus 277 ~ 277 (456)
.
T Consensus 300 ~ 300 (302)
T 1ml9_A 300 Y 300 (302)
T ss_dssp -
T ss_pred c
Confidence 4
No 89
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=98.37 E-value=2.3e-07 Score=87.91 Aligned_cols=41 Identities=29% Similarity=0.429 Sum_probs=33.6
Q ss_pred ccccccCCCcCCCeeE--E-e-----CCEEEEEEecCCCCCCcccCChh
Q 012772 218 VISIINHSCLPNAVLV--F-E-----GRLAVVRAVQHVPKGAEGQFDDI 258 (456)
Q Consensus 218 ~~sl~NHSC~PN~~~~--f-~-----~~~~~vra~~~I~~Gee~~~~~~ 258 (456)
.+.++||||.||+... + + ..++.+.|+|+|++||||||++.
T Consensus 215 ~aRfiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~rdI~~GEELt~dY~ 263 (300)
T 2r3a_A 215 VSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTINAGEELTFDYQ 263 (300)
T ss_dssp GGGGCEECSSCSEEEEEEESSCCCTTSCEEEEEESSCBCTTCEEEECGG
T ss_pred hHHheecCCCCCEEEEEEEeccCCCCceEEEEEEccCCCCCCEEEEECC
Confidence 5678999999999874 3 2 14899999999999999996654
No 90
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.37 E-value=1.4e-05 Score=77.90 Aligned_cols=125 Identities=14% Similarity=0.067 Sum_probs=101.3
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCc-cHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHH
Q 012772 314 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSV-NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 392 (456)
Q Consensus 314 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~-~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~ 392 (456)
.+..+..+|++++|+..+++++.. .++.++ ....++..++.++...|++++|+.++++++.+.+.. ++....+
T Consensus 20 ~a~~~~~~g~~~~A~~~~~~al~~----~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~ 93 (373)
T 1hz4_A 20 RAQVAINDGNPDEAERLAKLALEE----LPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQH--DVWHYAL 93 (373)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHT----CCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TCHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHc----CCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhc--CcHHHHH
Confidence 444556789999999999988753 233332 356678899999999999999999999999987763 3445667
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Q 012772 393 LQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQ 444 (456)
Q Consensus 393 ~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~ 444 (456)
..++++|.++..+|++++|+.++++|+++.....++++|........|+.+.
T Consensus 94 ~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~ 145 (373)
T 1hz4_A 94 WSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLL 145 (373)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999888877887777776666553
No 91
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.36 E-value=5.2e-06 Score=72.14 Aligned_cols=91 Identities=18% Similarity=0.113 Sum_probs=73.7
Q ss_pred HHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHH
Q 012772 315 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQ 394 (456)
Q Consensus 315 a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~ 394 (456)
+..+...+++++|++.++++..+ .|.+ ..+...++.+|..+|+|++|++++++++.+ +|.....
T Consensus 80 ~~~~~~~~~~~~a~~~~~~a~~~-----~~~~---~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~--------~p~~~~~ 143 (184)
T 3vtx_A 80 GSANFMIDEKQAAIDALQRAIAL-----NTVY---ADAYYKLGLVYDSMGEHDKAIEAYEKTISI--------KPGFIRA 143 (184)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHh-----Cccc---hHHHHHHHHHHHHhCCchhHHHHHHHHHHh--------cchhhhH
Confidence 33445667888888888777643 3444 456778999999999999999999999865 4555678
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 395 YYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 395 l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
++++|.++..+|++++|++.|++|+++
T Consensus 144 ~~~lg~~~~~~g~~~~A~~~~~~al~~ 170 (184)
T 3vtx_A 144 YQSIGLAYEGKGLRDEAVKYFKKALEK 170 (184)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhC
Confidence 999999999999999999999999875
No 92
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.34 E-value=2.5e-06 Score=76.97 Aligned_cols=96 Identities=17% Similarity=0.097 Sum_probs=78.0
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHc-----------cCHHHHHHHHHHHHHH
Q 012772 311 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL-----------EDWKEALAYCQLTIPV 379 (456)
Q Consensus 311 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~-----------g~~~~A~~~~~~~l~~ 379 (456)
....+..+...|++++|+..+++++++ .|++ ..++.+++.++..+ |++++|+..+++++.+
T Consensus 42 ~~~lg~~~~~~g~~~~A~~~~~~al~~-----~P~~---~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 113 (217)
T 2pl2_A 42 LYWLARTQLKLGLVNPALENGKTLVAR-----TPRY---LGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERV 113 (217)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHh
Confidence 344566677889999999999999764 3444 56778899999999 9999999999999875
Q ss_pred HHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 012772 380 YQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 422 (456)
Q Consensus 380 ~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~ 422 (456)
.|.-...++.+|.++..+|++++|+..|++|+++-
T Consensus 114 --------~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 148 (217)
T 2pl2_A 114 --------NPRYAPLHLQRGLVYALLGERDKAEASLKQALALE 148 (217)
T ss_dssp --------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred --------CcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc
Confidence 34445677888999999999999999999988874
No 93
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.33 E-value=3e-06 Score=76.41 Aligned_cols=94 Identities=16% Similarity=0.126 Sum_probs=78.8
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHH
Q 012772 312 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 391 (456)
Q Consensus 312 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~ 391 (456)
...+..+..+|++++|+..++++++ +.|.+ ..++..++.++..+|++++|+.++++++.+ .|..
T Consensus 9 ~~lg~~~~~~g~~~~A~~~~~~al~-----~~p~~---~~a~~~lg~~~~~~g~~~~A~~~~~~al~~--------~P~~ 72 (217)
T 2pl2_A 9 LRLGVQLYALGRYDAALTLFERALK-----ENPQD---PEALYWLARTQLKLGLVNPALENGKTLVAR--------TPRY 72 (217)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHT-----TSSSC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH-----hCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCc
Confidence 3455567788999999999998874 23444 667889999999999999999999999875 3445
Q ss_pred HHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHH
Q 012772 392 GLQYYTCGKLEWFL-----------GDTENAIKSMTEAVEI 421 (456)
Q Consensus 392 ~~~l~~La~~~~~~-----------g~~~eA~~~l~~Al~i 421 (456)
...++.+|.++..+ |++++|+..|++|+++
T Consensus 73 ~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 113 (217)
T 2pl2_A 73 LGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERV 113 (217)
T ss_dssp HHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHh
Confidence 66789999999999 9999999999999986
No 94
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.33 E-value=1.2e-05 Score=73.06 Aligned_cols=104 Identities=10% Similarity=0.081 Sum_probs=89.1
Q ss_pred HHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCC
Q 012772 308 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 387 (456)
Q Consensus 308 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~ 387 (456)
+......+..+...|++++|++.+++++... .+ ..++..++.++..+|++++|++++++++.+... .++.
T Consensus 5 a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~------~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~ 74 (258)
T 3uq3_A 5 ADKEKAEGNKFYKARQFDEAIEHYNKAWELH------KD---ITYLNNRAAAEYEKGEYETAISTLNDAVEQGRE-MRAD 74 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS------CC---THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCC
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhh------cc---HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcc-cccc
Confidence 4556667777888999999999999998652 22 467789999999999999999999999987664 4567
Q ss_pred ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 388 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 388 hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
++..+..++.+|.++..+|++++|+.++++++.+
T Consensus 75 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 108 (258)
T 3uq3_A 75 YKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTE 108 (258)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhc
Confidence 7788999999999999999999999999999985
No 95
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=98.30 E-value=1.9e-07 Score=86.63 Aligned_cols=40 Identities=23% Similarity=0.282 Sum_probs=32.8
Q ss_pred ccccccCCCcCCCeeEE-e----CCEEEEEEecCCCCCCcccCCh
Q 012772 218 VISIINHSCLPNAVLVF-E----GRLAVVRAVQHVPKGAEGQFDD 257 (456)
Q Consensus 218 ~~sl~NHSC~PN~~~~f-~----~~~~~vra~~~I~~Gee~~~~~ 257 (456)
.+.++||||.|||...+ . +..+.++|+|+|++|||||+++
T Consensus 186 ~aRfiNHSC~PN~~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dY 230 (261)
T 2f69_A 186 LGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAY 230 (261)
T ss_dssp CGGGCEECSSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEECC
T ss_pred ceeeEeeCCCCCeEEEEEEcCCCCcEEEEEECcccCCCCEEEEEc
Confidence 35789999999998876 2 2344899999999999998654
No 96
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=98.30 E-value=1.8e-07 Score=88.82 Aligned_cols=40 Identities=28% Similarity=0.347 Sum_probs=32.5
Q ss_pred ccccccCCCcCCCeeE--EeC------CEEEEEEecCCCCCCcccCCh
Q 012772 218 VISIINHSCLPNAVLV--FEG------RLAVVRAVQHVPKGAEGQFDD 257 (456)
Q Consensus 218 ~~sl~NHSC~PN~~~~--f~~------~~~~vra~~~I~~Gee~~~~~ 257 (456)
.+.++||||.||+... +.+ .++.+.|+|+|++|||||+++
T Consensus 213 ~aRfiNHSC~PN~~~~~v~~~~~~~~~~~i~~~A~rdI~~GEELt~dY 260 (299)
T 1mvh_A 213 VSRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDY 260 (299)
T ss_dssp GGGGCEECSSCSEEEEEEESCTTCTTSCEEEEEESSCBCTTCBCEECC
T ss_pred hhheEeecCCCCeEEEEEEeecCCCCceEEEEEEccCcCCCCEEEEEc
Confidence 4568999999999763 322 489999999999999998654
No 97
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.29 E-value=2e-05 Score=71.56 Aligned_cols=114 Identities=16% Similarity=0.136 Sum_probs=90.2
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHH
Q 012772 312 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 391 (456)
Q Consensus 312 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~ 391 (456)
...+..+...|++++|+..+++++.. .|.+ ..++..++.++..+|++++|+.++++++.. .|..
T Consensus 143 ~~~~~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--------~~~~ 206 (258)
T 3uq3_A 143 RLEGKEYFTKSDWPNAVKAYTEMIKR-----APED---ARGYSNRAAALAKLMSFPEAIADCNKAIEK--------DPNF 206 (258)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTC
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhc-----Cccc---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--------CHHH
Confidence 44555677889999999999998764 3443 467789999999999999999999999874 2444
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH
Q 012772 392 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEA 443 (456)
Q Consensus 392 ~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~ 443 (456)
...++.+|.++..+|++++|..++++|+++..... +.|...++...|+.+
T Consensus 207 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~--~~p~~~~~~~~l~~~ 256 (258)
T 3uq3_A 207 VRAYIRKATAQIAVKEYASALETLDAARTKDAEVN--NGSSAREIDQLYYKA 256 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH--TTTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhc--CCCchHHHHHHHHHh
Confidence 67799999999999999999999999999876542 445555566655543
No 98
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.29 E-value=2.5e-05 Score=70.38 Aligned_cols=97 Identities=16% Similarity=0.108 Sum_probs=80.6
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCCh
Q 012772 310 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 389 (456)
Q Consensus 310 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp 389 (456)
.+...+..+..+|++++|++.+++++.+. ++.+. .++..++.++..+|++++|+.++++++. .+|
T Consensus 9 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~----~~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~al~--------~~p 73 (228)
T 4i17_A 9 QLKNEGNDALNAKNYAVAFEKYSEYLKLT----NNQDS---VTAYNCGVCADNIKKYKEAADYFDIAIK--------KNY 73 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHT----TTCCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHH--------TTC
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcc----CCCCc---HHHHHHHHHHHHhhcHHHHHHHHHHHHH--------hCc
Confidence 34556667788999999999999998653 11333 4566799999999999999999999984 356
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 390 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 390 ~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
.....++.+|.++..+|++++|+..+++|+++
T Consensus 74 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 105 (228)
T 4i17_A 74 NLANAYIGKSAAYRDMKNNQEYIATLTEGIKA 105 (228)
T ss_dssp SHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 67788999999999999999999999999976
No 99
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.28 E-value=3.6e-06 Score=69.06 Aligned_cols=84 Identities=10% Similarity=0.053 Sum_probs=68.8
Q ss_pred CCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q 012772 345 FSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 424 (456)
Q Consensus 345 ~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~ 424 (456)
-+|..+..+.++|..|...|+|++|++++++++.+ .|.-...++++|.++..+|++++|+..+++|+++
T Consensus 8 inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--- 76 (126)
T 4gco_A 8 INPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKR--------DPENAILYSNRAACLTKLMEFQRALDDCDTCIRL--- 76 (126)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---
T ss_pred HCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHh---
Confidence 46788899999999999999999999999999864 3455678999999999999999999999999986
Q ss_pred hcCCCCchHHHHHHHHHHHH
Q 012772 425 THGTNSPFMKELILKLEEAQ 444 (456)
Q Consensus 425 ~~G~~h~~~~~~~~~l~~~~ 444 (456)
.|+++. ....++.+.
T Consensus 77 --~p~~~~---a~~~lg~~~ 91 (126)
T 4gco_A 77 --DSKFIK---GYIRKAACL 91 (126)
T ss_dssp --CTTCHH---HHHHHHHHH
T ss_pred --hhhhhH---HHHHHHHHH
Confidence 445543 344444443
No 100
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.28 E-value=4.3e-06 Score=80.85 Aligned_cols=111 Identities=15% Similarity=0.116 Sum_probs=93.2
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhc---CCC
Q 012772 311 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVY---PQF 387 (456)
Q Consensus 311 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~---g~~ 387 (456)
....+..+...|++++|+..+++++.+ .|.+ ..++..++.+|..+|++++|+.++++++.+..... +..
T Consensus 254 ~~~l~~~~~~~g~~~~A~~~~~~al~~-----~~~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 325 (368)
T 1fch_A 254 WNKLGATLANGNQSEEAVAAYRRALEL-----QPGY---IRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEG 325 (368)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------C
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccc
Confidence 345566677889999999999998764 3433 56788999999999999999999999999876653 344
Q ss_pred ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCC
Q 012772 388 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTN 429 (456)
Q Consensus 388 hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~ 429 (456)
++..+..+..||.++..+|++++|...++++++++...+|.+
T Consensus 326 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~ 367 (368)
T 1fch_A 326 GAMSENIWSTLRLALSMLGQSDAYGAADARDLSTLLTMFGLP 367 (368)
T ss_dssp CCCCHHHHHHHHHHHHHHTCGGGHHHHHTTCHHHHHHHTTCC
T ss_pred cchhhHHHHHHHHHHHHhCChHhHHHhHHHHHHHHHHhcCCC
Confidence 677889999999999999999999999999999999998864
No 101
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.28 E-value=8.4e-06 Score=73.54 Aligned_cols=112 Identities=19% Similarity=0.105 Sum_probs=86.8
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCc----cHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCC
Q 012772 311 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSV----NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQ 386 (456)
Q Consensus 311 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~----~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~ 386 (456)
....+..+..+|++++|++.+++++++ .|.++ .++.++..++.++..+|++++|++++++++.+
T Consensus 79 ~~~l~~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~------- 146 (228)
T 4i17_A 79 YIGKSAAYRDMKNNQEYIATLTEGIKA-----VPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDV------- 146 (228)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS-------
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHH-----CCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhc-------
Confidence 344566677889999999999999764 35554 24577889999999999999999999999863
Q ss_pred CChH--HHHHHHHHHHHHHHcCCH---------------------------HHHHHHHHHHHHHHHHhcCCCCchHHHHH
Q 012772 387 FHPL--LGLQYYTCGKLEWFLGDT---------------------------ENAIKSMTEAVEILRITHGTNSPFMKELI 437 (456)
Q Consensus 387 ~hp~--~~~~l~~La~~~~~~g~~---------------------------~eA~~~l~~Al~i~~~~~G~~h~~~~~~~ 437 (456)
+|. ....+++||.++..+|+. ++|+.+|++|+++ .|+++.+..++
T Consensus 147 -~p~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l-----~p~~~~~~~~l 220 (228)
T 4i17_A 147 -TSKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTL-----SPNRTEIKQMQ 220 (228)
T ss_dssp -SCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHH
T ss_pred -CCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----CCCCHHHHHHH
Confidence 677 788899999999888887 6777777777764 57777666554
Q ss_pred HHH
Q 012772 438 LKL 440 (456)
Q Consensus 438 ~~l 440 (456)
..+
T Consensus 221 ~~i 223 (228)
T 4i17_A 221 DQV 223 (228)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 102
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.28 E-value=1.6e-05 Score=75.89 Aligned_cols=115 Identities=18% Similarity=0.181 Sum_probs=90.6
Q ss_pred HHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCcc-HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCC
Q 012772 308 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN-LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQ 386 (456)
Q Consensus 308 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~-~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~ 386 (456)
+......+..+...|++++|++.+++++.. .|.++. ...++..++.++..+|++++|+.++++++..
T Consensus 234 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-----~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~------- 301 (359)
T 3ieg_A 234 LNKLIESAEELIRDGRYTDATSKYESVMKT-----EPSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQM------- 301 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-------
Confidence 334455677788899999999999988764 344443 4566788999999999999999999999875
Q ss_pred CChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHH
Q 012772 387 FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKL 440 (456)
Q Consensus 387 ~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l 440 (456)
+|.....++.+|.++..+|++++|...|++|+++ .|+++.....+..+
T Consensus 302 -~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~-----~p~~~~~~~~l~~~ 349 (359)
T 3ieg_A 302 -EPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEH-----NENDQQIREGLEKA 349 (359)
T ss_dssp -CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-----CTTCHHHHHHHHHH
T ss_pred -CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCChHHHHHHHHH
Confidence 3444668999999999999999999999999975 46666655444433
No 103
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.28 E-value=1.7e-05 Score=68.42 Aligned_cols=115 Identities=7% Similarity=0.016 Sum_probs=91.4
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHH-HHHccCH--HHHHHHHHHHHHHHHHhcCC
Q 012772 310 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKI-LMELEDW--KEALAYCQLTIPVYQRVYPQ 386 (456)
Q Consensus 310 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~-~~~~g~~--~~A~~~~~~~l~~~e~~~g~ 386 (456)
.....+..+...|++++|+..+++++.+. |.+ ..++..++.+ +...|++ ++|+.++++++..
T Consensus 46 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~-----p~~---~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~------- 110 (177)
T 2e2e_A 46 QWALLGEYYLWQNDYSNSLLAYRQALQLR-----GEN---AELYAALATVLYYQASQHMTAQTRAMIDKALAL------- 110 (177)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHH-----CSC---HHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcC-----CCC---HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHh-------
Confidence 34456666778899999999999998653 444 4567788988 8899999 9999999999864
Q ss_pred CChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHH
Q 012772 387 FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 445 (456)
Q Consensus 387 ~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~ 445 (456)
+|.....++.+|.++..+|++++|+..+++|+++ .|+++....++..+..++.
T Consensus 111 -~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~-----~p~~~~~~~~~~~i~~~~~ 163 (177)
T 2e2e_A 111 -DSNEITALMLLASDAFMQANYAQAIELWQKVMDL-----NSPRINRTQLVESINMAKL 163 (177)
T ss_dssp -CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT-----CCTTSCHHHHHHHHHHHHH
T ss_pred -CCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhh-----CCCCccHHHHHHHHHHHHH
Confidence 2333567899999999999999999999999875 5566777777777776654
No 104
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.28 E-value=4.4e-06 Score=65.39 Aligned_cols=93 Identities=17% Similarity=0.112 Sum_probs=74.9
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 012772 314 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 393 (456)
Q Consensus 314 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~ 393 (456)
.+..+..+|++++|+..+++++.. .|.+ ..++..++.++..+|++++|++++++++.. .| . .....
T Consensus 12 ~~~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~----~~-~-~~~~~ 77 (112)
T 2kck_A 12 EGVLQYDAGNYTESIDLFEKAIQL-----DPEE---SKYWLMKGKALYNLERYEEAVDCYNYVINV----IE-D-EYNKD 77 (112)
T ss_dssp HHHHHHSSCCHHHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT----SC-C-TTCHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHh-----CcCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh----Cc-c-cchHH
Confidence 344566789999999999998764 2433 456789999999999999999999999864 22 2 11456
Q ss_pred HHHHHHHHHHHc-CCHHHHHHHHHHHHH
Q 012772 394 QYYTCGKLEWFL-GDTENAIKSMTEAVE 420 (456)
Q Consensus 394 ~l~~La~~~~~~-g~~~eA~~~l~~Al~ 420 (456)
.++.+|.++..+ |++++|++++++++.
T Consensus 78 ~~~~l~~~~~~~~~~~~~A~~~~~~~~~ 105 (112)
T 2kck_A 78 VWAAKADALRYIEGKEVEAEIAEARAKL 105 (112)
T ss_dssp HHHHHHHHHTTCSSCSHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 789999999999 999999999999875
No 105
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=98.27 E-value=5.6e-07 Score=91.64 Aligned_cols=91 Identities=12% Similarity=0.143 Sum_probs=71.6
Q ss_pred CCCHHHHHHHHhhHhccccccccCCCCcceeeeccccccccCCCcCCCee-EEeCCEEEEEEecCCCCCCccc--CChhh
Q 012772 183 EISINEIAENFSKLACNAHTICNSELRPLGTGLYPVISIINHSCLPNAVL-VFEGRLAVVRAVQHVPKGAEGQ--FDDIQ 259 (456)
Q Consensus 183 ~~~~~~l~~~~~~~~~N~~~i~~~~~~~~g~glyp~~sl~NHSC~PN~~~-~f~~~~~~vra~~~I~~Gee~~--~~~~r 259 (456)
.++.+.+.-.++.+.+++|.+...++...+.+|+|.+.|+||||.||... .++++.++++|.++|++||||+ |.+..
T Consensus 237 ~~t~e~f~wA~~~v~SRa~~~~~~~g~~~~~~LvP~~Dm~NH~~~~~~~~~~~~~~~~~~~a~~~i~~Geei~isYG~~~ 316 (497)
T 3smt_A 237 SFTYEDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVALQDFRAGEQIYIFYGTRS 316 (497)
T ss_dssp CCCHHHHHHHHHHHHHHCEEEECTTSSSEEEEECTTGGGCEECSCSEEEEEETTTTEEEEEESSCBCTTCEEEECCCSCC
T ss_pred ccCHHHHHHhhheEecccccccCcccccccceeechHHhhcCCCcccceeeeccCCeEEEEeCCccCCCCEEEEeCCCCC
Confidence 46788888888999999999877666667899999999999999996543 3457889999999999999975 76644
Q ss_pred HHHhh--CCccccCCC
Q 012772 260 ESAIL--EGYRCKDDG 273 (456)
Q Consensus 260 ~~~l~--~~f~C~C~~ 273 (456)
...|+ .||.+..-.
T Consensus 317 n~~Ll~~YGFv~~~Np 332 (497)
T 3smt_A 317 NAEFVIHSGFFFDNNS 332 (497)
T ss_dssp HHHHHHHHSCCCTTCT
T ss_pred hHHHHHHCCCCCCCCC
Confidence 44443 488876433
No 106
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.26 E-value=1.1e-05 Score=73.53 Aligned_cols=91 Identities=9% Similarity=0.051 Sum_probs=50.3
Q ss_pred hhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHH
Q 012772 317 ALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYY 396 (456)
Q Consensus 317 ~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~ 396 (456)
.+...|++++|++.+++++.. .|.+ ..++..++.++..+|++++|++++++++. .+.+|.....++
T Consensus 80 ~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~la~~~~~~g~~~~A~~~~~~~~~------~~~~~~~~~~~~ 145 (252)
T 2ho1_A 80 VFQTEMEPKLADEEYRKALAS-----DSRN---ARVLNNYGGFLYEQKRYEEAYQRLLEASQ------DTLYPERSRVFE 145 (252)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHTT------CTTCTTHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHH-----CcCc---HHHHHHHHHHHHHHhHHHHHHHHHHHHHh------CccCcccHHHHH
Confidence 344455555555555555432 1222 34445556666666666666666655543 234555556666
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 397 TCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 397 ~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
.+|.++..+|++++|+.++++++++
T Consensus 146 ~la~~~~~~g~~~~A~~~~~~~~~~ 170 (252)
T 2ho1_A 146 NLGLVSLQMKKPAQAKEYFEKSLRL 170 (252)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 6666666666666666666666553
No 107
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.25 E-value=4.8e-06 Score=80.77 Aligned_cols=122 Identities=13% Similarity=0.173 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhc--CCC-------CccHHHHHHHHHHHHHHccCHHHHHHHHHHH
Q 012772 306 SEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLY--HPF-------SVNLMQTREKLIKILMELEDWKEALAYCQLT 376 (456)
Q Consensus 306 ~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l--~p~-------h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~ 376 (456)
..+......+..+..+|++++|+..|++++.+..... ... ......++.+++.+|..+|+|++|+.+++++
T Consensus 177 ~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~a 256 (338)
T 2if4_A 177 GAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIV 256 (338)
T ss_dssp HHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3455566788888999999999999999986532110 000 0001137889999999999999999999999
Q ss_pred HHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHH
Q 012772 377 IPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKL 440 (456)
Q Consensus 377 l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l 440 (456)
|.+ +|.....++++|.++..+|++++|+..|++|+++- |+++.....+..+
T Consensus 257 l~~--------~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~-----p~~~~a~~~L~~l 307 (338)
T 2if4_A 257 LTE--------EEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYA-----PDDKAIRRELRAL 307 (338)
T ss_dssp HHH--------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC--------------------
T ss_pred HHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-----CCCHHHHHHHHHH
Confidence 974 34456789999999999999999999999998763 4555554444333
No 108
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=98.25 E-value=2.1e-07 Score=88.62 Aligned_cols=40 Identities=20% Similarity=0.173 Sum_probs=32.3
Q ss_pred ccccccCCCcCCCeeEE-eC---CE-EEEEEecCCCCCCcccCCh
Q 012772 218 VISIINHSCLPNAVLVF-EG---RL-AVVRAVQHVPKGAEGQFDD 257 (456)
Q Consensus 218 ~~sl~NHSC~PN~~~~f-~~---~~-~~vra~~~I~~Gee~~~~~ 257 (456)
.++++||||.|||...+ .. +. +.|+|+|+|++|||||+++
T Consensus 240 ~ar~iNHsc~pN~~~~~~~~~~~~~~~~~~a~r~I~~geElt~~Y 284 (293)
T 1h3i_A 240 LGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAY 284 (293)
T ss_dssp CGGGSEEESSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEEEE
T ss_pred ceeeeccCCCCCeEEEEEEcCCCCcEEEEEECCccCCCCEEEEec
Confidence 35688999999999886 22 33 5899999999999998653
No 109
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.25 E-value=1.3e-05 Score=77.53 Aligned_cols=93 Identities=14% Similarity=0.053 Sum_probs=71.1
Q ss_pred HHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHH
Q 012772 315 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQ 394 (456)
Q Consensus 315 a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~ 394 (456)
+..+...|++++|++.+++++.+ .|.+. ...++..++.+|..+|++++|++++++++.+ +|.....
T Consensus 184 ~~~~~~~g~~~~A~~~~~~al~~-----~p~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~ 249 (365)
T 4eqf_A 184 SKSPVDSSVLEGVKELYLEAAHQ-----NGDMI-DPDLQTGLGVLFHLSGEFNRAIDAFNAALTV--------RPEDYSL 249 (365)
T ss_dssp -----CCHHHHHHHHHHHHHHHH-----SCSSC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHH
T ss_pred HHHHhhhhhHHHHHHHHHHHHHh-----CcCcc-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CCCCHHH
Confidence 33445567777777777777653 34421 2456788999999999999999999999875 3444668
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 395 YYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 395 l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
++.+|.++..+|++++|+.++++|+++
T Consensus 250 ~~~l~~~~~~~g~~~~A~~~~~~al~~ 276 (365)
T 4eqf_A 250 WNRLGATLANGDRSEEAVEAYTRALEI 276 (365)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999987
No 110
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.25 E-value=9.4e-06 Score=72.13 Aligned_cols=104 Identities=10% Similarity=-0.053 Sum_probs=83.2
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh-------
Q 012772 311 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRV------- 383 (456)
Q Consensus 311 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~------- 383 (456)
....+..+...|++++|++.+++++.+ .|.+ ..++.+++.+|..+|++++|++++++++......
T Consensus 40 ~~~lg~~~~~~g~~~~A~~~~~~al~~-----~~~~---~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~ 111 (213)
T 1hh8_A 40 CFNIGCMYTILKNMTEAEKAFTRSINR-----DKHL---AVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKI 111 (213)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGG
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-----Cccc---hHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHH
Confidence 344556677889999999999998764 2333 5778899999999999999999999998742210
Q ss_pred cC-CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 012772 384 YP-QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 422 (456)
Q Consensus 384 ~g-~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~ 422 (456)
.| ..+|.....++++|.++..+|++++|+..+++|+++.
T Consensus 112 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 151 (213)
T 1hh8_A 112 LGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMK 151 (213)
T ss_dssp GTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred hccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcC
Confidence 00 1557778999999999999999999999999998763
No 111
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.24 E-value=1.6e-05 Score=70.67 Aligned_cols=94 Identities=17% Similarity=0.185 Sum_probs=78.3
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCCh
Q 012772 310 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 389 (456)
Q Consensus 310 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp 389 (456)
.....+..+...|++++|++.+++++ .| ...++.+++.+|..+|++++|+.++++++.+ +|
T Consensus 8 ~~~~~g~~~~~~~~~~~A~~~~~~a~-------~~----~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~~ 68 (213)
T 1hh8_A 8 SLWNEGVLAADKKDWKGALDAFSAVQ-------DP----HSRICFNIGCMYTILKNMTEAEKAFTRSINR--------DK 68 (213)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTSS-------SC----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CT
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHc-------CC----ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------Cc
Confidence 34556677778999999999887662 22 2468899999999999999999999999875 24
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 012772 390 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 422 (456)
Q Consensus 390 ~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~ 422 (456)
.....++++|.++..+|++++|+..+++|+++.
T Consensus 69 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 101 (213)
T 1hh8_A 69 HLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQL 101 (213)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred cchHHHHHHHHHHHHcccHHHHHHHHHHHHHhC
Confidence 456789999999999999999999999999864
No 112
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.23 E-value=1.8e-05 Score=72.10 Aligned_cols=94 Identities=9% Similarity=-0.063 Sum_probs=76.0
Q ss_pred HHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHH
Q 012772 313 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 392 (456)
Q Consensus 313 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~ 392 (456)
..+..+...|++++|++.+++++. .+.++....++..++.++..+|++++|++++++++.. . |...
T Consensus 110 ~la~~~~~~g~~~~A~~~~~~~~~------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~----~----~~~~ 175 (252)
T 2ho1_A 110 NYGGFLYEQKRYEEAYQRLLEASQ------DTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRL----N----RNQP 175 (252)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTT------CTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----C----SCCH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHh------CccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc----C----cccH
Confidence 345556788999999998887754 3456667788889999999999999999999998764 2 2335
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 012772 393 LQYYTCGKLEWFLGDTENAIKSMTEAVE 420 (456)
Q Consensus 393 ~~l~~La~~~~~~g~~~eA~~~l~~Al~ 420 (456)
..++.+|.++..+|++++|..+++++++
T Consensus 176 ~~~~~la~~~~~~g~~~~A~~~~~~~~~ 203 (252)
T 2ho1_A 176 SVALEMADLLYKEREYVPARQYYDLFAQ 203 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 6788999999999999999999999876
No 113
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=98.22 E-value=5.9e-07 Score=75.95 Aligned_cols=39 Identities=15% Similarity=0.156 Sum_probs=34.7
Q ss_pred cccccCCCcC---CCeeEEeCCEEEEEEecCCCCCCcccCCh
Q 012772 219 ISIINHSCLP---NAVLVFEGRLAVVRAVQHVPKGAEGQFDD 257 (456)
Q Consensus 219 ~sl~NHSC~P---N~~~~f~~~~~~vra~~~I~~Gee~~~~~ 257 (456)
+.++||||.| |+...-.++++.++|+|+|++|||++|++
T Consensus 100 ~RfINhSc~p~eqNl~~~~~~~~I~~~A~RdI~~GEEL~~dY 141 (149)
T 2qpw_A 100 LRYVNWACSGEEQNLFPLEINRAIYYKTLKPIAPGEELLVWY 141 (149)
T ss_dssp GGGCEECBTTBTCCEEEEEETTEEEEEESSCBCTTCBCEECC
T ss_pred eeeeeccCChhhcCEEEEEECCEEEEEEccCCCCCCEEEEcc
Confidence 4578999999 99987678899999999999999999765
No 114
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=98.21 E-value=2.9e-05 Score=68.91 Aligned_cols=112 Identities=11% Similarity=0.049 Sum_probs=78.5
Q ss_pred HHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHc-cCHHHHHHHHHHHHHHHHHhcCCCChHH
Q 012772 313 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL-EDWKEALAYCQLTIPVYQRVYPQFHPLL 391 (456)
Q Consensus 313 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~-g~~~~A~~~~~~~l~~~e~~~g~~hp~~ 391 (456)
..+..+...|++++|++.+++++.. .|.+ ..++..++.++... |++++|+.++++++. .+.+|..
T Consensus 47 ~l~~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~------~~~~~~~ 112 (225)
T 2vq2_A 47 VRAEIYQYLKVNDKAQESFRQALSI-----KPDS---AEINNNYGWFLCGRLNRPAESMAYFDKALA------DPTYPTP 112 (225)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHTTTCCHHHHHHHHHHHHT------STTCSCH
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHh-----CCCC---hHHHHHHHHHHHHhcCcHHHHHHHHHHHHc------CcCCcch
Confidence 3455566778888888888777653 2333 44667788888888 888888888888775 3466777
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHH
Q 012772 392 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAE 446 (456)
Q Consensus 392 ~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~e 446 (456)
...++.+|.++...|++++|+.++++++++ .++++ .....++.+...
T Consensus 113 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~-----~~~~~---~~~~~la~~~~~ 159 (225)
T 2vq2_A 113 YIANLNKGICSAKQGQFGLAEAYLKRSLAA-----QPQFP---PAFKELARTKML 159 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTCH---HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCc---hHHHHHHHHHHH
Confidence 778888888888888888888888888764 34443 334455544443
No 115
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=98.21 E-value=2.9e-05 Score=66.47 Aligned_cols=92 Identities=14% Similarity=0.075 Sum_probs=70.6
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 012772 314 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 393 (456)
Q Consensus 314 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~ 393 (456)
.+..+...|++++|++.+++++.. .|.+ ..++..++.++...|++++|++++++++.. +|....
T Consensus 48 ~~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~ 111 (186)
T 3as5_A 48 LGIAYVKTGAVDRGTELLERSLAD-----APDN---VKVATVLGLTYVQVQKYDLAVPLLIKVAEA--------NPINFN 111 (186)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CcHhHH
Confidence 444556678899998888888654 2333 456678888888999999999998888764 233456
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 394 QYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 394 ~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
.++.+|.++..+|++++|+.++++++++
T Consensus 112 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 112 VRFRLGVALDNLGRFDEAIDSFKIALGL 139 (186)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHhc
Confidence 7788899999999999999999988875
No 116
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.20 E-value=2.5e-05 Score=62.80 Aligned_cols=92 Identities=24% Similarity=0.335 Sum_probs=70.6
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 012772 314 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 393 (456)
Q Consensus 314 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~ 393 (456)
.+..+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|+.++++++.. . |....
T Consensus 7 l~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-----~---~~~~~ 70 (136)
T 2fo7_A 7 LGNAYYKQGDYDEAIEYYQKALEL-----DPRS---AEAWYNLGNAYYKQGDYDEAIEYYQKALEL-----D---PRSAE 70 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----C---TTCHH
T ss_pred HHHHHHHcCcHHHHHHHHHHHHHc-----CCcc---hhHHHHHHHHHHHhcCHHHHHHHHHHHHHH-----C---CCchH
Confidence 344555678999999988888653 3333 456677888999999999999999888754 1 22345
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 394 QYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 394 ~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
.++.+|.++...|++++|++++++++.+
T Consensus 71 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 98 (136)
T 2fo7_A 71 AWYNLGNAYYKQGDYDEAIEYYQKALEL 98 (136)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 6788899999999999999999998875
No 117
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.20 E-value=1.6e-05 Score=73.22 Aligned_cols=101 Identities=13% Similarity=0.135 Sum_probs=82.4
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCCh
Q 012772 310 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 389 (456)
Q Consensus 310 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp 389 (456)
.....+..+...|++++|++.+++++.+ .|.+ ..++..++.+|...|++++|+.++++++.+ .|
T Consensus 45 ~~~~l~~~~~~~~~~~~A~~~~~~al~~-----~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~al~~--------~~ 108 (275)
T 1xnf_A 45 LLYERGVLYDSLGLRALARNDFSQALAI-----RPDM---PEVFNYLGIYLTQAGNFDAAYEAFDSVLEL--------DP 108 (275)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CT
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHc-----CCCc---HHHHHHHHHHHHHccCHHHHHHHHHHHHhc--------Cc
Confidence 3445666777899999999999998764 3443 567789999999999999999999999875 23
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCc
Q 012772 390 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSP 431 (456)
Q Consensus 390 ~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~ 431 (456)
.....++.+|.++..+|++++|++++++++++ .|+++
T Consensus 109 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~-----~~~~~ 145 (275)
T 1xnf_A 109 TYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD-----DPNDP 145 (275)
T ss_dssp TCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH
T ss_pred cccHHHHHHHHHHHHhccHHHHHHHHHHHHHh-----CCCCh
Confidence 33578899999999999999999999999874 45555
No 118
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=98.19 E-value=3.5e-05 Score=68.36 Aligned_cols=95 Identities=9% Similarity=0.017 Sum_probs=75.9
Q ss_pred HHHHhhhhc-CChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHH
Q 012772 313 KKTLALTSC-GNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 391 (456)
Q Consensus 313 ~~a~~~~~~-g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~ 391 (456)
..+..+... |++++|++.+++++. .|.++....++..++.++...|++++|+.++++++.. .|..
T Consensus 81 ~l~~~~~~~~~~~~~A~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--------~~~~ 146 (225)
T 2vq2_A 81 NYGWFLCGRLNRPAESMAYFDKALA------DPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAA--------QPQF 146 (225)
T ss_dssp HHHHHHHTTTCCHHHHHHHHHHHHT------STTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTC
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHc------CcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCC
Confidence 345556678 899999998888764 3566777788889999999999999999999888764 2233
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 392 GLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 392 ~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
...++.+|.++..+|++++|..++++++++
T Consensus 147 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 147 PPAFKELARTKMLAGQLGDADYYFKKYQSR 176 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 567888999999999999999999998875
No 119
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.18 E-value=2.5e-05 Score=62.27 Aligned_cols=102 Identities=19% Similarity=0.172 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHc
Q 012772 326 EVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFL 405 (456)
Q Consensus 326 ~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~ 405 (456)
+|++.++++++ ..|.+ ..++..++.+|..+|++++|+.++++++.+ .|..+..++.||.++..+
T Consensus 3 ~a~~~~~~al~-----~~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~ 66 (115)
T 2kat_A 3 AITERLEAMLA-----QGTDN---MLLRFTLGKTYAEHEQFDAALPHLRAALDF--------DPTYSVAWKWLGKTLQGQ 66 (115)
T ss_dssp CHHHHHHHHHT-----TTCCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-----hCCCc---HHHHHHHHHHHHHccCHHHHHHHHHHHHHH--------CCCcHHHHHHHHHHHHHc
Confidence 45555665543 23444 467889999999999999999999999864 344466789999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHH
Q 012772 406 GDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 445 (456)
Q Consensus 406 g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~ 445 (456)
|++++|+..|++|+++.... | +.....++...|..+..
T Consensus 67 g~~~~A~~~~~~al~~~~~~-~-~~~~~~~l~~~l~~l~~ 104 (115)
T 2kat_A 67 GDRAGARQAWESGLAAAQSR-G-DQQVVKELQVFLRRLAR 104 (115)
T ss_dssp TCHHHHHHHHHHHHHHHHHH-T-CHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcccc-c-cHHHHHHHHHHHHHhcc
Confidence 99999999999999987653 2 22233444444444443
No 120
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.17 E-value=2.8e-05 Score=70.24 Aligned_cols=122 Identities=9% Similarity=-0.009 Sum_probs=92.9
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHH------------------ccCHHHHHHH
Q 012772 311 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME------------------LEDWKEALAY 372 (456)
Q Consensus 311 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~------------------~g~~~~A~~~ 372 (456)
....+..+...|++++|++.++++++ ..|.++....++..++.++.. +|++++|+..
T Consensus 44 ~~~lg~~~~~~~~~~~A~~~~~~~l~-----~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 118 (225)
T 2yhc_A 44 QLDLIYAYYKNADLPLAQAAIDRFIR-----LNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSD 118 (225)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH-----HCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHH-----HCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHH
Confidence 44556677889999999999999875 458888877788888887765 6799999999
Q ss_pred HHHHHHHHHHhcCCCChHHH--------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHH
Q 012772 373 CQLTIPVYQRVYPQFHPLLG--------------LQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELIL 438 (456)
Q Consensus 373 ~~~~l~~~e~~~g~~hp~~~--------------~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~ 438 (456)
+++++.. +| +++... ...+.+|.++..+|++++|+..|+++++.. |++|...+.+.
T Consensus 119 ~~~~l~~----~P-~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~-----p~~~~~~~a~~ 188 (225)
T 2yhc_A 119 FSKLVRG----YP-NSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDY-----PDTQATRDALP 188 (225)
T ss_dssp HHHHHTT----CT-TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS-----TTSHHHHHHHH
T ss_pred HHHHHHH----Cc-CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHC-----cCCCccHHHHH
Confidence 9988753 33 444322 223678999999999999999999998864 56777777777
Q ss_pred HHHHHHHHH
Q 012772 439 KLEEAQAEA 447 (456)
Q Consensus 439 ~l~~~~~e~ 447 (456)
.++.+..++
T Consensus 189 ~l~~~~~~~ 197 (225)
T 2yhc_A 189 LMENAYRQM 197 (225)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHc
Confidence 777775443
No 121
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.15 E-value=1.8e-05 Score=72.93 Aligned_cols=97 Identities=15% Similarity=0.060 Sum_probs=65.6
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHH
Q 012772 312 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 391 (456)
Q Consensus 312 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~ 391 (456)
...|..+...|++++|+..++++++. .|.+.. ++..++.+|..+|++++|++++++++. .|.+....
T Consensus 7 ~~~a~~~~~~~~~~~A~~~~~~~l~~-----~p~~~~---~~~~l~~~~~~~~~~~~A~~~~~~a~~-----~~~~~~~~ 73 (272)
T 3u4t_A 7 FRYADFLFKNNNYAEAIEVFNKLEAK-----KYNSPY---IYNRRAVCYYELAKYDLAQKDIETYFS-----KVNATKAK 73 (272)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHT-----TCCCST---THHHHHHHHHHTTCHHHHHHHHHHHHT-----TSCTTTCC
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHHHHhhHHHHHHHHHHHHh-----ccCchhHH
Confidence 44555666777888888877777642 344433 455677777778888888887777764 23333334
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 392 GLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 392 ~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
+..++.+|.++..+|++++|++++++|+++
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~ 103 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAVDR 103 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhc
Confidence 667777788888888888888888877774
No 122
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.13 E-value=2.6e-05 Score=73.67 Aligned_cols=107 Identities=9% Similarity=0.029 Sum_probs=86.9
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCC-hHHH
Q 012772 314 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH-PLLG 392 (456)
Q Consensus 314 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~h-p~~~ 392 (456)
.+..+...|++++|++.+++++.. .|.+ ..++..++.++..+|++++|+.++++++.......+... |...
T Consensus 165 l~~~~~~~~~~~~A~~~~~~al~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 236 (330)
T 3hym_B 165 IGLEYGLTNNSKLAERFFSQALSI-----APED---PFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWE 236 (330)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTT-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCC
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHh-----CCCC---hHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHH
Confidence 455566789999999999888653 3444 567789999999999999999999999998776655433 5667
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchH
Q 012772 393 LQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM 433 (456)
Q Consensus 393 ~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~ 433 (456)
..++.+|.++..+|++++|+.++++|+++ .|+++..
T Consensus 237 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~-----~~~~~~~ 272 (330)
T 3hym_B 237 PLLNNLGHVCRKLKKYAEALDYHRQALVL-----IPQNAST 272 (330)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTCSHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhh-----CccchHH
Confidence 78999999999999999999999999986 3555544
No 123
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.12 E-value=6e-05 Score=74.93 Aligned_cols=112 Identities=18% Similarity=0.169 Sum_probs=90.1
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCcc-HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCC
Q 012772 310 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN-LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 388 (456)
Q Consensus 310 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~-~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~h 388 (456)
.....+..+...|++++|++.+++++.+ .|.++. ...++..++.++..+|++++|+.++++++.+ +
T Consensus 259 ~~~~~~~~~~~~g~~~~A~~~~~~~l~~-----~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~--------~ 325 (450)
T 2y4t_A 259 KLIESAEELIRDGRYTDATSKYESVMKT-----EPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQM--------E 325 (450)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH--------C
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------C
Confidence 3345577778889999999999998763 455544 3678899999999999999999999999875 4
Q ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHH
Q 012772 389 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILK 439 (456)
Q Consensus 389 p~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~ 439 (456)
|.....++.+|.++..+|++++|+..+++|+++ .|+++.....+..
T Consensus 326 p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~~~l~~ 371 (450)
T 2y4t_A 326 PDNVNALKDRAEAYLIEEMYDEAIQDYETAQEH-----NENDQQIREGLEK 371 (450)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-----SSSCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----CcchHHHHHHHHH
Confidence 555678999999999999999999999999983 5666665544443
No 124
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=98.11 E-value=2.5e-06 Score=85.94 Aligned_cols=86 Identities=20% Similarity=0.219 Sum_probs=65.5
Q ss_pred CCHHHHHHHHhhHhccccccccCC----CCcceeeeccccccccCCCcCCCeeEEeCCEEEEEEecCCCCCCccc--CCh
Q 012772 184 ISINEIAENFSKLACNAHTICNSE----LRPLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHVPKGAEGQ--FDD 257 (456)
Q Consensus 184 ~~~~~l~~~~~~~~~N~~~i~~~~----~~~~g~glyp~~sl~NHSC~PN~~~~f~~~~~~vra~~~I~~Gee~~--~~~ 257 (456)
++.+.....++.+.+-+|.+...+ ....+.+|.|.+.|+||||.||+.+.|+++.++++|.++|++||||+ |.+
T Consensus 184 ~t~e~f~wA~~~v~SRsf~~~~~~~~~~~~~~~~~LvP~~D~~NH~~~~~~~~~~~~~~~~~~a~~~i~~Geei~~~YG~ 263 (449)
T 3qxy_A 184 RSLELYHQLVALVMAYSFQEPLEEEEDEKEPNSPVMVPAADILNHLANHNANLEYSANCLRMVATQPIPKGHEIFNTYGQ 263 (449)
T ss_dssp CCHHHHHHHHHHHHHHCBCCCCC-----CCCCCCBBCTTGGGCEECSSCSEEEEECSSEEEEEESSCBCTTCEEEECCSS
T ss_pred CcHHHHHHHHHHHHHHhcccccCcccccccCCceeEeecHHHhcCCCCCCeEEEEeCCeEEEEECCCcCCCchhhccCCC
Confidence 566666666666666667664321 23567899999999999999999999999999999999999999975 776
Q ss_pred hhHHHhh--CCccc
Q 012772 258 IQESAIL--EGYRC 269 (456)
Q Consensus 258 ~r~~~l~--~~f~C 269 (456)
.....|+ .||..
T Consensus 264 ~~n~~ll~~YGF~~ 277 (449)
T 3qxy_A 264 MANWQLIHMYGFVE 277 (449)
T ss_dssp CCHHHHHHHHSCCC
T ss_pred CCHHHHHHhCCCCC
Confidence 4444443 47765
No 125
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.11 E-value=2.1e-05 Score=81.66 Aligned_cols=95 Identities=17% Similarity=-0.000 Sum_probs=79.6
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChH
Q 012772 311 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 390 (456)
Q Consensus 311 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~ 390 (456)
....+..+..+|++++|++.+++++++ .|++ ..++.+++.+|..+|++++|++++++++.+ +|.
T Consensus 26 ~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~ 89 (568)
T 2vsy_A 26 WLMLADAELGMGDTTAGEMAVQRGLAL-----HPGH---PEAVARLGRVRWTQQRHAEAAVLLQQASDA--------APE 89 (568)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTT-----STTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--------CCC
Confidence 345566677789999999999988753 3444 667889999999999999999999999875 344
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 391 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 391 ~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
....+++||.++..+|++++|++.|++|+++
T Consensus 90 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 120 (568)
T 2vsy_A 90 HPGIALWLGHALEDAGQAEAAAAAYTRAHQL 120 (568)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 4678899999999999999999999999987
No 126
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.10 E-value=4.7e-05 Score=61.16 Aligned_cols=93 Identities=24% Similarity=0.334 Sum_probs=74.6
Q ss_pred HHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHH
Q 012772 313 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 392 (456)
Q Consensus 313 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~ 392 (456)
..+..+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|++++++++.. . |...
T Consensus 40 ~~a~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~-----~---~~~~ 103 (136)
T 2fo7_A 40 NLGNAYYKQGDYDEAIEYYQKALEL-----DPRS---AEAWYNLGNAYYKQGDYDEAIEYYQKALEL-----D---PRSA 103 (136)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH-----C---TTCH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHH-----CCCc---hHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----C---CCCh
Confidence 3455566789999999999888753 3433 456778999999999999999999998864 2 2234
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 393 LQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 393 ~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
..++.+|.++...|++++|..++++++++
T Consensus 104 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 132 (136)
T 2fo7_A 104 EAWYNLGNAYYKQGDYDEAIEYYQKALEL 132 (136)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 57788999999999999999999999875
No 127
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.10 E-value=3.6e-05 Score=68.69 Aligned_cols=115 Identities=17% Similarity=0.131 Sum_probs=79.8
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChH---
Q 012772 314 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL--- 390 (456)
Q Consensus 314 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~--- 390 (456)
.+..+...|++++|+..+++++++ .|++ ..++.+++.++..+|++++|+.++++++.+ . |+++.
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~----~-P~~~~a~~ 126 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQK-----APNN---VDCLEACAEMQVCRGQEKDALRMYEKILQL----E-ADNLAANI 126 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH----C-TTCHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc----C-CCCHHHHH
Confidence 566677899999999999999864 3554 567889999999999999999999999874 1 22221
Q ss_pred -HHH----------------------------HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHH
Q 012772 391 -LGL----------------------------QYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLE 441 (456)
Q Consensus 391 -~~~----------------------------~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~ 441 (456)
+|. .++.+|..+..+|++++|+..|++|+++. |+ +....++..+.
T Consensus 127 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~-----P~-~~~~~~l~~i~ 200 (208)
T 3urz_A 127 FLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRF-----PS-TEAQKTLDKIL 200 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTS-----CC-HHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-----CC-HHHHHHHHHHH
Confidence 111 22334445555677788888888887653 33 33555666666
Q ss_pred HHHHHH
Q 012772 442 EAQAEA 447 (456)
Q Consensus 442 ~~~~e~ 447 (456)
+.+.++
T Consensus 201 ~~~~~~ 206 (208)
T 3urz_A 201 RIEKEV 206 (208)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 666554
No 128
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.09 E-value=2.7e-05 Score=79.12 Aligned_cols=94 Identities=12% Similarity=0.026 Sum_probs=78.2
Q ss_pred CChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHc--------cCHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 012772 322 GNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL--------EDWKEALAYCQLTIPVYQRVYPQFHPLLGL 393 (456)
Q Consensus 322 g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~--------g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~ 393 (456)
|++++|++.+++++++ .|++ ..++.+++.+|..+ |++++|++++++++.+ .+.++..+.
T Consensus 193 g~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-----~p~~~~~~~ 259 (474)
T 4abn_A 193 RHVMDSVRQAKLAVQM-----DVLD---GRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKV-----DRKASSNPD 259 (474)
T ss_dssp HHHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-----CGGGGGCHH
T ss_pred hhHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHh-----CCCcccCHH
Confidence 8999999999999864 3444 56778999999999 9999999999999976 121337788
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchH
Q 012772 394 QYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM 433 (456)
Q Consensus 394 ~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~ 433 (456)
.++++|.++..+|++++|+..|++|+++ .|+++..
T Consensus 260 ~~~~lg~~~~~~g~~~~A~~~~~~al~l-----~p~~~~a 294 (474)
T 4abn_A 260 LHLNRATLHKYEESYGEALEGFSQAAAL-----DPAWPEP 294 (474)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHH
Confidence 9999999999999999999999999986 4556543
No 129
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.09 E-value=6.3e-05 Score=65.09 Aligned_cols=99 Identities=19% Similarity=0.257 Sum_probs=63.4
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH------------
Q 012772 314 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQ------------ 381 (456)
Q Consensus 314 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e------------ 381 (456)
.+..+..+|++++|++.|++++++ .|++ ..++..++.+|..+|++++|+..+.+++....
T Consensus 11 lG~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 82 (184)
T 3vtx_A 11 IGDKKRTKGDFDGAIRAYKKVLKA-----DPNN---VETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSA 82 (184)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHH
Confidence 344455667777777777777653 2443 34556666666666666666666655433210
Q ss_pred ---------------HhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 382 ---------------RVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 382 ---------------~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
+.. ..+|.-...+..+|.++..+|++++|++.|++++++
T Consensus 83 ~~~~~~~~~a~~~~~~a~-~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~ 136 (184)
T 3vtx_A 83 NFMIDEKQAAIDALQRAI-ALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISI 136 (184)
T ss_dssp HHHTTCHHHHHHHHHHHH-HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHH-HhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHh
Confidence 000 013444556788899999999999999999999876
No 130
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.08 E-value=4.2e-05 Score=57.56 Aligned_cols=81 Identities=23% Similarity=0.319 Sum_probs=64.2
Q ss_pred cHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcC
Q 012772 348 NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHG 427 (456)
Q Consensus 348 ~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G 427 (456)
....++..++.++...|++++|+.++++++.. +|.....++.+|.++..+|++++|+.++++|+++ .
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-----~ 73 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL-----D 73 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----C
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc-----C
Confidence 34567788999999999999999999999864 2334567899999999999999999999999986 3
Q ss_pred CCCchHHHHHHHHHHHH
Q 012772 428 TNSPFMKELILKLEEAQ 444 (456)
Q Consensus 428 ~~h~~~~~~~~~l~~~~ 444 (456)
|+++. ....++.+.
T Consensus 74 p~~~~---~~~~l~~~~ 87 (91)
T 1na3_A 74 PNNAE---AKQNLGNAK 87 (91)
T ss_dssp TTCHH---HHHHHHHHH
T ss_pred CCCHH---HHHHHHHHH
Confidence 45543 344444443
No 131
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.08 E-value=1.2e-05 Score=62.79 Aligned_cols=71 Identities=25% Similarity=0.250 Sum_probs=59.8
Q ss_pred ccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Q 012772 347 VNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 425 (456)
Q Consensus 347 ~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~ 425 (456)
|.-..++..++.+|..+|+|++|+.++++++.+ .|.....++.||.++..+|++++|+..|++|+++....
T Consensus 4 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 4 PEDPFTRYALAQEHLKHDNASRALALFEELVET--------DPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 334567889999999999999999999999874 23334489999999999999999999999999986653
No 132
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.07 E-value=6.5e-05 Score=70.78 Aligned_cols=117 Identities=13% Similarity=0.026 Sum_probs=87.1
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHH
Q 012772 312 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 391 (456)
Q Consensus 312 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~ 391 (456)
...+..+...|++++|++.+++++.. .|.+ ..++..++.++...|++++|+.++++++.. .|..
T Consensus 176 ~~la~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~~~~ 239 (327)
T 3cv0_A 176 ASLGVLYNLSNNYDSAAANLRRAVEL-----RPDD---AQLWNKLGATLANGNRPQEALDAYNRALDI--------NPGY 239 (327)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTC
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCCC
Confidence 34455567789999999999988764 3444 467789999999999999999999999864 2334
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCc----hHHHHHHHHHHHH
Q 012772 392 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSP----FMKELILKLEEAQ 444 (456)
Q Consensus 392 ~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~----~~~~~~~~l~~~~ 444 (456)
...++.+|.++..+|++++|.+++++|+++....-++.+. ....+...++.+.
T Consensus 240 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 296 (327)
T 3cv0_A 240 VRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLL 296 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHH
Confidence 5578899999999999999999999999886553222221 1444555555554
No 133
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=98.07 E-value=3.6e-05 Score=69.37 Aligned_cols=109 Identities=14% Similarity=0.092 Sum_probs=82.5
Q ss_pred HHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHH
Q 012772 313 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 392 (456)
Q Consensus 313 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~ 392 (456)
..+..+...|++++|++.+++++.. .|.+ ..++..++.++...|++++|+.++++++.. +|...
T Consensus 130 ~~a~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~ 193 (243)
T 2q7f_A 130 MLGTVLVKLEQPKLALPYLQRAVEL-----NEND---TEARFQFGMCLANEGMLDEALSQFAAVTEQ--------DPGHA 193 (243)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCCHHHHHHHHHHHHH--------CTTCH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHh-----CCcc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CcccH
Confidence 3455566789999999999888754 2333 456788999999999999999999988764 23335
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHH
Q 012772 393 LQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEE 442 (456)
Q Consensus 393 ~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~ 442 (456)
..++.+|.++..+|++++|..++++++++ .|+++.....+..|..
T Consensus 194 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~~~~~~~~l~~ 238 (243)
T 2q7f_A 194 DAFYNAGVTYAYKENREKALEMLDKAIDI-----QPDHMLALHAKKLLGH 238 (243)
T ss_dssp HHHHHHHHHHHHTTCTTHHHHHHHHHHHH-----CTTCHHHHHHHTC---
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHcc-----CcchHHHHHHHHHHHh
Confidence 57899999999999999999999999874 5677766655554443
No 134
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=98.06 E-value=3.6e-05 Score=65.82 Aligned_cols=94 Identities=10% Similarity=0.020 Sum_probs=76.2
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHH
Q 012772 312 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 391 (456)
Q Consensus 312 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~ 391 (456)
...+..+...|++++|++.+++++. ..|.+ ..++..++.++...|++++|+.++++++.. .|..
T Consensus 12 ~~~~~~~~~~~~~~~A~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~ 75 (186)
T 3as5_A 12 RDKGISHAKAGRYSQAVMLLEQVYD-----ADAFD---VDVALHLGIAYVKTGAVDRGTELLERSLAD--------APDN 75 (186)
T ss_dssp HHHHHHHHHHTCHHHHHHHHTTTCC-----TTSCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTC
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHH-----hCccC---hHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCC
Confidence 4455566678999999988776643 23333 577889999999999999999999999875 3444
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 392 GLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 392 ~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
...+..+|.++...|++++|.+++++++.+
T Consensus 76 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 105 (186)
T 3as5_A 76 VKVATVLGLTYVQVQKYDLAVPLLIKVAEA 105 (186)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 567899999999999999999999999986
No 135
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=98.06 E-value=6.4e-05 Score=67.67 Aligned_cols=91 Identities=15% Similarity=0.024 Sum_probs=50.9
Q ss_pred HHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHH
Q 012772 315 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQ 394 (456)
Q Consensus 315 a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~ 394 (456)
+..+...|++++|++.+++++.. .|.+ ..++..++.++..+|++++|+.++++++.. .|.....
T Consensus 98 a~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~ 161 (243)
T 2q7f_A 98 GNVYVVKEMYKEAKDMFEKALRA-----GMEN---GDLFYMLGTVLVKLEQPKLALPYLQRAVEL--------NENDTEA 161 (243)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH-----TCCS---HHHHHHHHHHHHHTSCHHHHHHHHHHHHHH--------CTTCHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHhccHHHHHHHHHHHHHh--------CCccHHH
Confidence 33344556666666666555442 2222 234555666666666666666666666543 1222335
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 395 YYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 395 l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
++.+|.++...|++++|+++++++++.
T Consensus 162 ~~~l~~~~~~~~~~~~A~~~~~~~~~~ 188 (243)
T 2q7f_A 162 RFQFGMCLANEGMLDEALSQFAAVTEQ 188 (243)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 566666666666666666666666554
No 136
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.06 E-value=1.5e-05 Score=73.48 Aligned_cols=91 Identities=10% Similarity=-0.018 Sum_probs=76.2
Q ss_pred hhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 012772 319 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTC 398 (456)
Q Consensus 319 ~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~L 398 (456)
..+|++++|++.++++++. .+..++....++..++.++...|++++|+.++++++.. +|.....++.+
T Consensus 16 ~~~~~~~~A~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~l 83 (275)
T 1xnf_A 16 QPTLQQEVILARMEQILAS----RALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAI--------RPDMPEVFNYL 83 (275)
T ss_dssp CCCHHHHHHHHHHHHHHTS----SCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CCCCHHHHHHH
T ss_pred CccchHHHHHHHHHHHHhc----ccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHc--------CCCcHHHHHHH
Confidence 4567889999988888653 22334567889999999999999999999999999875 34445678999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHH
Q 012772 399 GKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 399 a~~~~~~g~~~eA~~~l~~Al~i 421 (456)
|.++...|++++|++++++|+++
T Consensus 84 a~~~~~~~~~~~A~~~~~~al~~ 106 (275)
T 1xnf_A 84 GIYLTQAGNFDAAYEAFDSVLEL 106 (275)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHhc
Confidence 99999999999999999999986
No 137
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.05 E-value=5.3e-05 Score=72.26 Aligned_cols=98 Identities=13% Similarity=0.105 Sum_probs=82.2
Q ss_pred HHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCC
Q 012772 308 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 387 (456)
Q Consensus 308 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~ 387 (456)
++.....+..+...|++++|+..+++++.. .|.+ ..++..++.++..+|++++|+.++++++..
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~-----~p~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-------- 66 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDG-----DPDN---YIAYYRRATVFLAMGKSKAALPDLTKVIAL-------- 66 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----Cccc---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------
Confidence 445566777788899999999999998763 3444 467889999999999999999999999865
Q ss_pred ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 388 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 388 hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
.|.....++.+|.++...|++++|+..+++++++
T Consensus 67 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 100 (359)
T 3ieg_A 67 KMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKS 100 (359)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTS
T ss_pred CCCcchHHHHHHHHHHHcCChHHHHHHHHHHHhc
Confidence 3444477899999999999999999999999864
No 138
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.04 E-value=8.4e-05 Score=70.01 Aligned_cols=103 Identities=13% Similarity=0.028 Sum_probs=81.1
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH----------
Q 012772 310 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPV---------- 379 (456)
Q Consensus 310 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~---------- 379 (456)
.....|..+..+|++++|+..|+++++. .|++ ..++..|+.++..+|++++|+.++++++..
T Consensus 119 ~~~~~a~~~~~~g~~~~A~~~~~~al~~-----~P~~---~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~ 190 (287)
T 3qou_A 119 LXAQQAMQLMQESNYTDALPLLXDAWQL-----SNQN---GEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLV 190 (287)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----TTSC---HHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHH
T ss_pred hHHHHHHHHHhCCCHHHHHHHHHHHHHh-----CCcc---hhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHH
Confidence 3455666677889999999999999764 3555 467889999999999999999998876431
Q ss_pred -----------------HHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 380 -----------------YQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 380 -----------------~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
+++.. ..+|.-...+++||.++..+|++++|+..|+++++.
T Consensus 191 ~~~~l~~~~~~~~a~~~l~~al-~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~ 248 (287)
T 3qou_A 191 AQIELLXQAADTPEIQQLQQQV-AENPEDAALATQLALQLHQVGRNEEALELLFGHLRX 248 (287)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHH-HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcccCccHHHHHHHH-hcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhc
Confidence 11111 125666678999999999999999999999999986
No 139
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.04 E-value=2.3e-05 Score=79.63 Aligned_cols=94 Identities=16% Similarity=0.090 Sum_probs=79.8
Q ss_pred HHHHHHhhhhcCCh-HHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCCh
Q 012772 311 LSKKTLALTSCGNH-QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 389 (456)
Q Consensus 311 l~~~a~~~~~~g~~-~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp 389 (456)
....+..+...|++ ++|++.+++++++ .|. ...++..++.+|..+|++++|++++++++.+ .|
T Consensus 105 ~~~lg~~~~~~g~~~~~A~~~~~~al~~-----~p~---~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p 168 (474)
T 4abn_A 105 LMLKGKALNVTPDYSPEAEVLLSKAVKL-----EPE---LVEAWNQLGEVYWKKGDVTSAHTCFSGALTH--------CK 168 (474)
T ss_dssp HHHHHHHHTSSSSCCHHHHHHHHHHHHH-----CTT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT--------CC
T ss_pred HHHHHHHHHhccccHHHHHHHHHHHHhh-----CCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CC
Confidence 34556667789999 9999999999864 243 3578899999999999999999999999864 23
Q ss_pred HHHHHHHHHHHHHHHc---------CCHHHHHHHHHHHHHH
Q 012772 390 LLGLQYYTCGKLEWFL---------GDTENAIKSMTEAVEI 421 (456)
Q Consensus 390 ~~~~~l~~La~~~~~~---------g~~~eA~~~l~~Al~i 421 (456)
. ...+++||.++..+ |++++|+..|++|+++
T Consensus 169 ~-~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 208 (474)
T 4abn_A 169 N-KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM 208 (474)
T ss_dssp C-HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred C-HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh
Confidence 3 48899999999999 9999999999999986
No 140
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.04 E-value=3.3e-05 Score=60.58 Aligned_cols=91 Identities=16% Similarity=0.170 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCC
Q 012772 350 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTN 429 (456)
Q Consensus 350 ~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~ 429 (456)
...+..++.++...|+|++|++++++++.+ .|.....++++|.++..+|++++|++.+++|+++ .|+
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~ 70 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITA--------QPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRY-----TST 70 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS-----CSS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----CCC
Confidence 466788999999999999999999999875 3333567899999999999999999999999875 344
Q ss_pred C---chHHHHHHHHHHHHHHHHhhhcc
Q 012772 430 S---PFMKELILKLEEAQAEASYKLSS 453 (456)
Q Consensus 430 h---~~~~~~~~~l~~~~~e~~~~~~~ 453 (456)
+ ......+..++.+...+...+.+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~a 97 (111)
T 2l6j_A 71 AEHVAIRSKLQYRLELAQGAVGSVQIP 97 (111)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhHhhh
Confidence 4 12255667777776666554443
No 141
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.03 E-value=1.2e-05 Score=74.09 Aligned_cols=97 Identities=13% Similarity=-0.001 Sum_probs=73.3
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHH
Q 012772 312 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 391 (456)
Q Consensus 312 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~ 391 (456)
...+..+...|++++|++.+++++. .+++......++..++.++..+|++++|++++++++.. +|..
T Consensus 41 ~~l~~~~~~~~~~~~A~~~~~~a~~-----~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~--------~~~~ 107 (272)
T 3u4t_A 41 NRRAVCYYELAKYDLAQKDIETYFS-----KVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDR--------DTTR 107 (272)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHT-----TSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTC
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHh-----ccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhc--------Cccc
Confidence 3445556678899999888888764 22333445777888999999999999999999888863 2333
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 392 GLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 392 ~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
...+..+|.++..+|++++|+.++++|+++
T Consensus 108 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 137 (272)
T 3u4t_A 108 LDMYGQIGSYFYNKGNFPLAIQYMEKQIRP 137 (272)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHGGGCCS
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHhhc
Confidence 457888888888889988888888888775
No 142
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.02 E-value=3.1e-05 Score=65.92 Aligned_cols=97 Identities=12% Similarity=0.151 Sum_probs=70.8
Q ss_pred ChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCH----------HHHHHHHHHHHHHHHHhcCCCChHHH
Q 012772 323 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDW----------KEALAYCQLTIPVYQRVYPQFHPLLG 392 (456)
Q Consensus 323 ~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~----------~~A~~~~~~~l~~~e~~~g~~hp~~~ 392 (456)
.|++|++.+++++++ .|++ ..++.+++.++..++++ ++|+..++++|.+ .|...
T Consensus 17 ~feeA~~~~~~Ai~l-----~P~~---aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l--------dP~~~ 80 (158)
T 1zu2_A 17 LFEQIRQDAENTYKS-----NPLD---ADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLI--------DPKKD 80 (158)
T ss_dssp HHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH--------CTTCH
T ss_pred HHHHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh--------CcCcH
Confidence 567777777777653 3444 56778888888888765 4777777777754 45556
Q ss_pred HHHHHHHHHHHHcC-----------CHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHH
Q 012772 393 LQYYTCGKLEWFLG-----------DTENAIKSMTEAVEILRITHGTNSPFMKELILKL 440 (456)
Q Consensus 393 ~~l~~La~~~~~~g-----------~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l 440 (456)
..+++||.+|..+| ++++|+++|++|+++ -|+++.+...+...
T Consensus 81 ~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l-----~P~~~~y~~al~~~ 134 (158)
T 1zu2_A 81 EAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDE-----QPDNTHYLKSLEMT 134 (158)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHh-----CCCCHHHHHHHHHH
Confidence 67889999998775 899999999999987 56777666555443
No 143
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.02 E-value=5.6e-05 Score=71.50 Aligned_cols=109 Identities=14% Similarity=0.117 Sum_probs=87.1
Q ss_pred hcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 012772 320 SCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCG 399 (456)
Q Consensus 320 ~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La 399 (456)
..|++++|+..+++++.. .|.+ ..++.+++.++..+|+|++|+.++++++.. .|++|. .++++|
T Consensus 178 ~~~~~~eA~~~~~~~l~~-----~p~~---~~~~~~la~~~~~~g~~~eA~~~l~~al~~-----~p~~~~---~l~~l~ 241 (291)
T 3mkr_A 178 GGEKLQDAYYIFQEMADK-----CSPT---LLLLNGQAACHMAQGRWEAAEGVLQEALDK-----DSGHPE---TLINLV 241 (291)
T ss_dssp CTTHHHHHHHHHHHHHHH-----SCCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHH---HHHHHH
T ss_pred CchHHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHH---HHHHHH
Confidence 458999999999988753 3444 567789999999999999999999999864 245554 589999
Q ss_pred HHHHHcCCHHH-HHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHh
Q 012772 400 KLEWFLGDTEN-AIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASY 449 (456)
Q Consensus 400 ~~~~~~g~~~e-A~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~e~~~ 449 (456)
.++..+|+..+ +..+++++++ ..|+||.+.++..+......-+..
T Consensus 242 ~~~~~~g~~~eaa~~~~~~~~~-----~~P~~~~~~d~~~~~~~fd~~~~~ 287 (291)
T 3mkr_A 242 VLSQHLGKPPEVTNRYLSQLKD-----AHRSHPFIKEYRAKENDFDRLVLQ 287 (291)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHH-----HCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHHH-----hCCCChHHHHHHHHHHHHHHHHHH
Confidence 99999999976 5688888875 579999999988777766554443
No 144
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.01 E-value=2.8e-05 Score=76.02 Aligned_cols=107 Identities=20% Similarity=0.223 Sum_probs=66.9
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 012772 314 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 393 (456)
Q Consensus 314 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~ 393 (456)
.+..+...|++++|++.+++++++ .|.+ ..++..++.++...|++++|++++++++.. +|....
T Consensus 277 l~~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~ 340 (388)
T 1w3b_A 277 LANALKEKGSVAEAEDCYNTALRL-----CPTH---ADSLNNLANIKREQGNIEEAVRLYRKALEV--------FPEFAA 340 (388)
T ss_dssp HHHHHHHHSCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHTTTCHHHHHHHHHHHTTS--------CTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhh-----Cccc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCcHH
Confidence 344455567777777776666543 2333 344566777777777777777777766542 345566
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Q 012772 394 QYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQ 444 (456)
Q Consensus 394 ~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~ 444 (456)
.++.||.++..+|++++|+..|++|+++ +|...+.+..|+.+.
T Consensus 341 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~--------~p~~~~a~~~lg~~~ 383 (388)
T 1w3b_A 341 AHSNLASVLQQQGKLQEALMHYKEAIRI--------SPTFADAYSNMGNTL 383 (388)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHTT--------CTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCCHHHHHhHHHHH
Confidence 7777777777778888888777777753 233344555555443
No 145
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.01 E-value=1.8e-05 Score=74.75 Aligned_cols=110 Identities=15% Similarity=0.195 Sum_probs=86.5
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCC-ccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChH
Q 012772 312 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFS-VNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 390 (456)
Q Consensus 312 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h-~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~ 390 (456)
...+..+...|++++|+..+++++.+....-.+.. +....++..++.++..+|++++|+.++++++.+ +|.
T Consensus 197 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~--------~~~ 268 (330)
T 3hym_B 197 HEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVL--------IPQ 268 (330)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STT
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh--------Ccc
Confidence 34555667889999999999999887654433322 334567889999999999999999999999875 233
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHH
Q 012772 391 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMK 434 (456)
Q Consensus 391 ~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~ 434 (456)
....++.+|.++..+|++++|..++++|+++ .|+++...
T Consensus 269 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~-----~p~~~~~~ 307 (330)
T 3hym_B 269 NASTYSAIGYIHSLMGNFENAVDYFHTALGL-----RRDDTFSV 307 (330)
T ss_dssp CSHHHHHHHHHHHHHTCHHHHHHHHHTTTTT-----CSCCHHHH
T ss_pred chHHHHHHHHHHHHhccHHHHHHHHHHHHcc-----CCCchHHH
Confidence 4567899999999999999999999999864 45665444
No 146
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.00 E-value=3.6e-05 Score=72.60 Aligned_cols=113 Identities=12% Similarity=0.022 Sum_probs=90.4
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCC---
Q 012772 311 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF--- 387 (456)
Q Consensus 311 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~--- 387 (456)
....+..+...|++++|+..+++++.. .|.+ ..++..++.++..+|++++|++++++++.......+..
T Consensus 209 ~~~l~~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 280 (327)
T 3cv0_A 209 WNKLGATLANGNRPQEALDAYNRALDI-----NPGY---VRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEA 280 (327)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHc-----CCCC---HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccc
Confidence 344566677889999999999998764 3433 45678899999999999999999999998654322222
Q ss_pred -ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCc
Q 012772 388 -HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSP 431 (456)
Q Consensus 388 -hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~ 431 (456)
+......+..+|.++..+|++++|...++++++++...+|-++.
T Consensus 281 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~ 325 (327)
T 3cv0_A 281 SREATRSMWDFFRMLLNVMNRPDLVELTYAQNVEPFAKEFGLQSM 325 (327)
T ss_dssp CCTHHHHHHHHHHHHHHHTTCHHHHHHHTTCCSHHHHHHTTSSCC
T ss_pred hhhcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcchhhhHHHh
Confidence 22267889999999999999999999999999999999887663
No 147
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.98 E-value=7.2e-05 Score=74.09 Aligned_cols=78 Identities=15% Similarity=0.059 Sum_probs=43.0
Q ss_pred CccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Q 012772 346 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 425 (456)
Q Consensus 346 h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~ 425 (456)
.+...++..+|+.+|..+|+|.+|+.++++++..... ..+++..+..+..+|.++..+|++++|..+|++|+.+....
T Consensus 131 ~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~ 208 (434)
T 4b4t_Q 131 VFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKK--LDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSI 208 (434)
T ss_dssp CSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT--SSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS
T ss_pred cHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHh--cccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcC
Confidence 3444555555555666666666666655555443221 24555555566666666666666666666666665555443
No 148
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.97 E-value=0.00017 Score=71.30 Aligned_cols=117 Identities=13% Similarity=-0.045 Sum_probs=98.7
Q ss_pred HHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHH
Q 012772 313 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 392 (456)
Q Consensus 313 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~ 392 (456)
..|..+..+|+|++|+..+++++....+ ..+++..+.++..++.+|..+|+|++|..++++++.+.... +..+...+
T Consensus 140 ~la~~~~~~g~~~~A~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~ 216 (434)
T 4b4t_Q 140 KLATLHYQKKQYKDSLALINDLLREFKK--LDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSI-YCPTQTVA 216 (434)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHTT--SSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-CCCHHHHH
T ss_pred HHHHHHHHccChHHHHHHHHHHHHHHHh--cccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcC-CCchHHHH
Confidence 4455567789999999999998765443 34577889999999999999999999999999999987765 44556778
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCch
Q 012772 393 LQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPF 432 (456)
Q Consensus 393 ~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~ 432 (456)
..+..+|.++...|++.+|..++.+|+++....-..++..
T Consensus 217 ~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~~~~~~~~~~ 256 (434)
T 4b4t_Q 217 ELDLMSGILHCEDKDYKTAFSYFFESFESYHNLTTHNSYE 256 (434)
T ss_dssp HHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHTTTSSCHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhhHH
Confidence 9999999999999999999999999999998876666643
No 149
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=97.96 E-value=4.5e-05 Score=74.50 Aligned_cols=91 Identities=14% Similarity=0.111 Sum_probs=58.8
Q ss_pred HHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHH
Q 012772 315 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQ 394 (456)
Q Consensus 315 a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~ 394 (456)
+..+...|++++|++.+++++.. .| ....++.+++.++...|++++|+.++++++.+ +|.....
T Consensus 142 ~~~~~~~g~~~~A~~~~~~al~~-----~p---~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~ 205 (388)
T 1w3b_A 142 GNLLKALGRLEEAKACYLKAIET-----QP---NFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTL--------DPNFLDA 205 (388)
T ss_dssp HHHHHTTSCHHHHHHHHHHHHHH-----CT---TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH--------CTTCHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHHh-----CC---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCcHHH
Confidence 33445567777777776666542 22 23455666777777777777777777777653 2334456
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 395 YYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 395 l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
+.++|.++...|++++|+..+++|+++
T Consensus 206 ~~~lg~~~~~~~~~~~A~~~~~~al~~ 232 (388)
T 1w3b_A 206 YINLGNVLKEARIFDRAVAAYLRALSL 232 (388)
T ss_dssp HHHHHHHHHTTTCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 777777777777777777777777764
No 150
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=97.93 E-value=0.00014 Score=75.11 Aligned_cols=109 Identities=12% Similarity=0.031 Sum_probs=87.1
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCcc-HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChH
Q 012772 312 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN-LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 390 (456)
Q Consensus 312 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~-~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~ 390 (456)
...+..+...|++++|++.+++++++..+. +.++. ...++..++.+|...|++++|++++++++.. . |.
T Consensus 479 ~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~--~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~-----~---p~ 548 (597)
T 2xpi_A 479 NELGVVAFNKSDMQTAINHFQNALLLVKKT--QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLL-----S---TN 548 (597)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHS--CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----S---SC
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhhhcc--ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----C---CC
Confidence 345556778899999999999998765431 23444 4788999999999999999999999999875 2 33
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHH
Q 012772 391 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKE 435 (456)
Q Consensus 391 ~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~ 435 (456)
....++.||.++...|++++|.+++++++++ .|+++....
T Consensus 549 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~-----~p~~~~~~~ 588 (597)
T 2xpi_A 549 DANVHTAIALVYLHKKIPGLAITHLHESLAI-----SPNEIMASD 588 (597)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHHHH
T ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHhc-----CCCChHHHH
Confidence 4578899999999999999999999999986 566655443
No 151
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=97.93 E-value=7.4e-05 Score=63.65 Aligned_cols=96 Identities=14% Similarity=0.029 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCC----CC-hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 012772 349 LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQ----FH-PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILR 423 (456)
Q Consensus 349 ~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~----~h-p~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~ 423 (456)
.+..+.+++..+...|+|++|+..|+++|.+-.. +|. +| |..+..++++|.++..+|++++|+..+.+|++++.
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n 88 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFN 88 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhh
Confidence 3556678899999999999999999999987543 221 22 34567999999999999999999999999999866
Q ss_pred HhcCCCCchHHHHH----HHHHHHHHH
Q 012772 424 ITHGTNSPFMKELI----LKLEEAQAE 446 (456)
Q Consensus 424 ~~~G~~h~~~~~~~----~~l~~~~~e 446 (456)
+. |+-.|...... .+++.+...
T Consensus 89 ~~-~e~~pd~~~A~~~~~~~rG~aL~~ 114 (159)
T 2hr2_A 89 RR-GELNQDEGKLWISAVYSRALALDG 114 (159)
T ss_dssp HH-CCTTSTHHHHHHHHHHHHHHHHHH
T ss_pred cc-ccCCCchHHHHHHHHHhHHHHHHH
Confidence 65 45566666666 666665443
No 152
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=97.92 E-value=1.1e-05 Score=63.40 Aligned_cols=96 Identities=14% Similarity=0.154 Sum_probs=73.8
Q ss_pred HHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCC-
Q 012772 309 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF- 387 (456)
Q Consensus 309 ~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~- 387 (456)
......+..+...|++++|++.+++++++ .|.+ ..++.+++.++..+|+|++|++++++++.+ .|.+
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~----~p~~~ 72 (111)
T 2l6j_A 5 EKQKEQGNSLFKQGLYREAVHCYDQLITA-----QPQN---PVGYSNKAMALIKLGEYTQAIQMCQQGLRY----TSTAE 72 (111)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTS----CSSTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh----CCCcc
Confidence 34455667778899999999999999864 3444 566789999999999999999999999863 3322
Q ss_pred -ChHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 012772 388 -HPLLGLQYYTCGKLEWFLGDTENAIKSMT 416 (456)
Q Consensus 388 -hp~~~~~l~~La~~~~~~g~~~eA~~~l~ 416 (456)
....+..++.+|.++..+|++++|+..++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 102 (111)
T 2l6j_A 73 HVAIRSKLQYRLELAQGAVGSVQIPVVEVD 102 (111)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCCCCCSSSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhHhHHH
Confidence 12247788999999999888877665443
No 153
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=97.92 E-value=3.3e-05 Score=65.63 Aligned_cols=76 Identities=9% Similarity=-0.060 Sum_probs=64.7
Q ss_pred CCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q 012772 345 FSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 424 (456)
Q Consensus 345 ~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~ 424 (456)
-+|.-..++..++.++..+|+|++|+.++++++.+ .|.-...+++||.++..+|++++|+..|++|+++
T Consensus 31 l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~--------~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l--- 99 (151)
T 3gyz_A 31 IPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIY--------DFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFAL--- 99 (151)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---
T ss_pred CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhh---
Confidence 45667788899999999999999999999999864 3444567999999999999999999999999986
Q ss_pred hcCCCCchH
Q 012772 425 THGTNSPFM 433 (456)
Q Consensus 425 ~~G~~h~~~ 433 (456)
.|++|..
T Consensus 100 --~P~~~~~ 106 (151)
T 3gyz_A 100 --GKNDYTP 106 (151)
T ss_dssp --SSSCCHH
T ss_pred --CCCCcHH
Confidence 4566644
No 154
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.92 E-value=0.0002 Score=71.02 Aligned_cols=97 Identities=13% Similarity=0.110 Sum_probs=81.6
Q ss_pred HHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCC
Q 012772 308 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 387 (456)
Q Consensus 308 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~ 387 (456)
.......+..+...|++++|+..+++++.. .|.+ ..++..++.+|..+|++++|+.++++++..
T Consensus 26 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~-----~p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~-------- 89 (450)
T 2y4t_A 26 VEKHLELGKKLLAAGQLADALSQFHAAVDG-----DPDN---YIAYYRRATVFLAMGKSKAALPDLTKVIQL-------- 89 (450)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHh-----CCcc---HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--------
Confidence 445566677788899999999999998754 3444 677888999999999999999999999875
Q ss_pred ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 012772 388 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVE 420 (456)
Q Consensus 388 hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~ 420 (456)
+|.....++.+|.++..+|++++|+..++++++
T Consensus 90 ~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~ 122 (450)
T 2y4t_A 90 KMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLK 122 (450)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 244467899999999999999999999999986
No 155
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=97.91 E-value=4.4e-05 Score=64.94 Aligned_cols=74 Identities=14% Similarity=0.079 Sum_probs=64.7
Q ss_pred cHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCC----------ChHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 012772 348 NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF----------HPLLGLQYYTCGKLEWFLGDTENAIKSMTE 417 (456)
Q Consensus 348 ~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~----------hp~~~~~l~~La~~~~~~g~~~eA~~~l~~ 417 (456)
..+..+..+|..+...|+|++|+.++.+++.+.....+.. .|..+..++++|.++..+|++++|+..+++
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 3567778899999999999999999999999877654322 567778999999999999999999999999
Q ss_pred HHHH
Q 012772 418 AVEI 421 (456)
Q Consensus 418 Al~i 421 (456)
|+++
T Consensus 89 al~~ 92 (162)
T 3rkv_A 89 VLKR 92 (162)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9987
No 156
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=97.91 E-value=6.1e-05 Score=60.93 Aligned_cols=65 Identities=18% Similarity=0.063 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 349 LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 349 ~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
....+..+|..+...|+|++|+.++++++.. .|.....++++|.++..+|++++|+..+++|+++
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 67 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKR--------APEDARGYSNRAAALAKLMSFPEAIADCNKAIEK 67 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 3566788999999999999999999999875 2444678999999999999999999999999987
No 157
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=97.90 E-value=9.7e-05 Score=74.53 Aligned_cols=98 Identities=11% Similarity=0.035 Sum_probs=83.6
Q ss_pred HHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCC
Q 012772 307 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQ 386 (456)
Q Consensus 307 ~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~ 386 (456)
.+..+...+..+...|++++|+..|++++... |+ ..++..++.++..+|++++|+.++++++..
T Consensus 5 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-----p~----~~~~~~la~~~~~~g~~~~A~~~~~~al~~------- 68 (514)
T 2gw1_A 5 YALALKDKGNQFFRNKKYDDAIKYYNWALELK-----ED----PVFYSNLSACYVSVGDLKKVVEMSTKALEL------- 68 (514)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC-----CC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-------
T ss_pred hHHHHHHHHHHHHHhccHHHHHHHHHHHHhcC-----cc----HHHHHhHHHHHHHHhhHHHHHHHHHHHhcc-------
Confidence 45566778888889999999999999998652 42 567889999999999999999999999864
Q ss_pred CChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 387 FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 387 ~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
+|.....++.+|.++..+|++++|+..|++++.+
T Consensus 69 -~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 102 (514)
T 2gw1_A 69 -KPDYSKVLLRRASANEGLGKFADAMFDLSVLSLN 102 (514)
T ss_dssp -CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS
T ss_pred -ChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 3445578899999999999999999999998765
No 158
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=97.89 E-value=6.8e-05 Score=60.54 Aligned_cols=84 Identities=12% Similarity=-0.044 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCc
Q 012772 352 TREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSP 431 (456)
Q Consensus 352 ~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~ 431 (456)
.+..++..+...|+|++|+.++++++.. .+.++.....++.+|.++..+|++++|++.++++++. .|+++
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~-----~p~~~ 73 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLEL-----YPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSR-----YPTHD 73 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTST
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHH-----CCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHH-----CCCCc
Confidence 3567888999999999999999998763 3577888889999999999999999999999999874 57776
Q ss_pred hHHHHHHHHHHHHH
Q 012772 432 FMKELILKLEEAQA 445 (456)
Q Consensus 432 ~~~~~~~~l~~~~~ 445 (456)
.....+..++.+..
T Consensus 74 ~~~~~~~~la~~~~ 87 (129)
T 2xev_A 74 KAAGGLLKLGLSQY 87 (129)
T ss_dssp THHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHH
Confidence 66666677666644
No 159
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=97.89 E-value=0.00011 Score=72.40 Aligned_cols=88 Identities=13% Similarity=0.094 Sum_probs=53.5
Q ss_pred hhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccC-HHHHHHHHHHHHHHHHHhcCCCChHHHHHHH
Q 012772 318 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELED-WKEALAYCQLTIPVYQRVYPQFHPLLGLQYY 396 (456)
Q Consensus 318 ~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~-~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~ 396 (456)
+...|++++|++.+++++.+ .|.+ ..++.+++.++..+|+ +++|+.++++++.+ +|.-...++
T Consensus 107 ~~~~g~~~~Al~~~~~al~l-----~P~~---~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l--------~P~~~~a~~ 170 (382)
T 2h6f_A 107 LQRDERSERAFKLTRDAIEL-----NAAN---YTVWHFRRVLLKSLQKDLHEEMNYITAIIEE--------QPKNYQVWH 170 (382)
T ss_dssp HHHTCCCHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH--------CTTCHHHHH
T ss_pred HHHCCChHHHHHHHHHHHHh-----CccC---HHHHHHHHHHHHHcccCHHHHHHHHHHHHHH--------CCCCHHHHH
Confidence 34456777777777666543 2333 4455666667777775 77777777766643 333344566
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 397 TCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 397 ~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
++|.++..+|++++|+..|++|+++
T Consensus 171 ~~g~~~~~~g~~~eAl~~~~kal~l 195 (382)
T 2h6f_A 171 HRRVLVEWLRDPSQELEFIADILNQ 195 (382)
T ss_dssp HHHHHHHHHTCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHh
Confidence 6666666666666666666666653
No 160
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=97.88 E-value=2.7e-05 Score=67.37 Aligned_cols=103 Identities=13% Similarity=0.070 Sum_probs=77.0
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH----------
Q 012772 311 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVY---------- 380 (456)
Q Consensus 311 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~---------- 380 (456)
.+..+..+...|++++|+..+++++... |++ ..++..++.++..+|++++|+.++++++...
T Consensus 9 ~~~~a~~~~~~g~~~~A~~~~~~al~~~-----P~~---~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~ 80 (176)
T 2r5s_A 9 LLKQVSELLQQGEHAQALNVIQTLSDEL-----QSR---GDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIA 80 (176)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTSCHHH-----HTS---HHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHC-----CCc---HHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHH
Confidence 3455666778899999999988886542 344 5677889999999999999998887664321
Q ss_pred ----HHhcCC------------CChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 381 ----QRVYPQ------------FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 381 ----e~~~g~------------~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
....+. .+|.-...++.+|.++..+|++++|+..|++++++
T Consensus 81 ~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 137 (176)
T 2r5s_A 81 KLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKV 137 (176)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHh
Confidence 000111 14555678899999999999999999999998764
No 161
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=97.86 E-value=0.00026 Score=59.51 Aligned_cols=100 Identities=12% Similarity=-0.003 Sum_probs=78.6
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChH
Q 012772 311 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 390 (456)
Q Consensus 311 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~ 390 (456)
....+..+...|++++|++.+++++.. .|.+ ..++..++.++..+|++++|+.++++++.. .+.++.
T Consensus 50 ~~~~a~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~-----~p~~~~ 116 (166)
T 1a17_A 50 YGNRSLAYLRTECYGYALGDATRAIEL-----DKKY---IKGYYRRAASNMALGKFRAALRDYETVVKV-----KPHDKD 116 (166)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-----Cccc---HHHHHHHHHHHHHhccHHHHHHHHHHHHHh-----CCCCHH
Confidence 344566677889999999999998764 3443 567789999999999999999999999864 234443
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q 012772 391 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 424 (456)
Q Consensus 391 ~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~ 424 (456)
+.....++..+..+|++++|++.+.++..++..
T Consensus 117 -~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~ 149 (166)
T 1a17_A 117 -AKMKYQECNKIVKQKAFERAIAGDEHKRSVVDS 149 (166)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHcccchHHHhcc
Confidence 344566677788899999999999999988854
No 162
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=97.85 E-value=5.8e-06 Score=84.23 Aligned_cols=108 Identities=13% Similarity=-0.013 Sum_probs=81.8
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCCh
Q 012772 310 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 389 (456)
Q Consensus 310 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp 389 (456)
.....|..+..+|++++|++.+++++++ .|. ...++.++|.+|..+|++++|++++++++.+ . +.++
T Consensus 42 ~~~~lg~~~~~~g~~~~A~~~~~~al~l-----~p~---~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~----~-p~~~ 108 (477)
T 1wao_1 42 YYGNRSLAYLRTECYGYALGDATRAIEL-----DKK---YIKGYYRRAASNMALGKFRAALRDYETVVKV----K-PHDK 108 (477)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHS-----CTT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH----S-TTCT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHh-----CCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----C-CCCH
Confidence 4455677788899999999999999764 344 4677889999999999999999999999875 2 2333
Q ss_pred HHHHHHHHHHHH--HHHcCCHHHHHHHHH-----------HHHHHHHHhcCCCCchH
Q 012772 390 LLGLQYYTCGKL--EWFLGDTENAIKSMT-----------EAVEILRITHGTNSPFM 433 (456)
Q Consensus 390 ~~~~~l~~La~~--~~~~g~~~eA~~~l~-----------~Al~i~~~~~G~~h~~~ 433 (456)
..+..++.+ +..+|++++|++.++ +|+++-....|+.++..
T Consensus 109 ---~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~ 162 (477)
T 1wao_1 109 ---DAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGPKLEDG 162 (477)
T ss_dssp ---THHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCCSCCCGGG
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhccccccccccccccc
Confidence 355666666 888899999999999 88888888888888763
No 163
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=97.83 E-value=9.2e-05 Score=63.04 Aligned_cols=68 Identities=10% Similarity=0.051 Sum_probs=60.1
Q ss_pred CccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 346 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 346 h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
+......+..++.++...|+|++|++++++++.+ .|.....++++|.++..+|++++|+..+++|+++
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 74 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSI--------APANPIYLSNRAAAYSASGQHEKAAEDAELATVV 74 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 4556788899999999999999999999999875 2444678999999999999999999999999987
No 164
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=97.83 E-value=0.00015 Score=57.99 Aligned_cols=88 Identities=11% Similarity=0.050 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCC
Q 012772 349 LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGT 428 (456)
Q Consensus 349 ~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~ 428 (456)
....+..++..+...|+|++|+.++++++.. .|.....++.+|.++..+|++++|+.++++++++... .++
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~ 73 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKEL--------DPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRE-NRE 73 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-STT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccc-cch
Confidence 3567788999999999999999999999875 2333567899999999999999999999999998764 345
Q ss_pred CCchHHHHHHHHHHHHH
Q 012772 429 NSPFMKELILKLEEAQA 445 (456)
Q Consensus 429 ~h~~~~~~~~~l~~~~~ 445 (456)
+++....+...++.+..
T Consensus 74 ~~~~~~~~~~~la~~~~ 90 (131)
T 1elr_A 74 DYRQIAKAYARIGNSYF 90 (131)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 55555666666666543
No 165
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=97.82 E-value=0.00032 Score=72.44 Aligned_cols=106 Identities=13% Similarity=0.087 Sum_probs=81.4
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChH-HH
Q 012772 314 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL-LG 392 (456)
Q Consensus 314 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~-~~ 392 (456)
.+..+...|++++|++.++++++. .|.++ .++..++.+|...|++++|++++++++...... +.+|. .+
T Consensus 447 l~~~~~~~g~~~~A~~~~~~~~~~-----~~~~~---~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~--~~~p~~~~ 516 (597)
T 2xpi_A 447 LGMQHMQLGNILLANEYLQSSYAL-----FQYDP---LLLNELGVVAFNKSDMQTAINHFQNALLLVKKT--QSNEKPWA 516 (597)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHH-----CCCCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS--CCCSGGGH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHh-----CCCCh---HHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhcc--ccchhhHH
Confidence 334455667777777777776543 34443 567889999999999999999999999876543 34555 48
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHH
Q 012772 393 LQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMK 434 (456)
Q Consensus 393 ~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~ 434 (456)
..++.+|.++...|++++|++.+++++++ +|+++.+.
T Consensus 517 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~-----~p~~~~~~ 553 (597)
T 2xpi_A 517 ATWANLGHAYRKLKMYDAAIDALNQGLLL-----STNDANVH 553 (597)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----SSCCHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----CCCChHHH
Confidence 89999999999999999999999999986 46665443
No 166
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=97.79 E-value=6.6e-05 Score=64.66 Aligned_cols=88 Identities=9% Similarity=0.092 Sum_probs=68.3
Q ss_pred hhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 012772 318 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYT 397 (456)
Q Consensus 318 ~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~ 397 (456)
+..+|++++|+..+++++.. .|.+ ..++..++.+|...|++++|+.++++++.+. +.+ ...++.
T Consensus 20 ~~~~~~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~-----p~~---~~~~~~ 83 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRA-----NPQN---SEQWALLGEYYLWQNDYSNSLLAYRQALQLR-----GEN---AELYAA 83 (177)
T ss_dssp CC-----CCCCHHHHHHHHH-----CCSC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-----CSC---HHHHHH
T ss_pred hhhccCHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-----CCC---HHHHHH
Confidence 45678889999988888753 3444 4677899999999999999999999998753 233 457889
Q ss_pred HHHH-HHHcCCH--HHHHHHHHHHHHH
Q 012772 398 CGKL-EWFLGDT--ENAIKSMTEAVEI 421 (456)
Q Consensus 398 La~~-~~~~g~~--~eA~~~l~~Al~i 421 (456)
+|.+ +...|++ ++|+..+++++++
T Consensus 84 la~~l~~~~~~~~~~~A~~~~~~al~~ 110 (177)
T 2e2e_A 84 LATVLYYQASQHMTAQTRAMIDKALAL 110 (177)
T ss_dssp HHHHHHHHTTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHh
Confidence 9999 8899999 9999999999986
No 167
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=97.77 E-value=0.00023 Score=67.19 Aligned_cols=101 Identities=14% Similarity=0.011 Sum_probs=74.9
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 012772 314 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 393 (456)
Q Consensus 314 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~ 393 (456)
.+..+...|++++|++.++++++. .|++. ..........++...|++++|+..+++++.. . |....
T Consensus 136 l~~~~~~~g~~~~A~~~l~~~~~~-----~p~~~-~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~----~----p~~~~ 201 (291)
T 3mkr_A 136 TVQILLKLDRLDLARKELKKMQDQ-----DEDAT-LTQLATAWVSLAAGGEKLQDAYYIFQEMADK----C----SPTLL 201 (291)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH-HHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH----S----CCCHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhh-----CcCcH-HHHHHHHHHHHHhCchHHHHHHHHHHHHHHh----C----CCcHH
Confidence 344466789999999999998764 35543 2222233334455669999999999999864 3 33466
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchH
Q 012772 394 QYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM 433 (456)
Q Consensus 394 ~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~ 433 (456)
.++++|.++..+|++++|+..|++|+++ .|++|.+
T Consensus 202 ~~~~la~~~~~~g~~~eA~~~l~~al~~-----~p~~~~~ 236 (291)
T 3mkr_A 202 LLNGQAACHMAQGRWEAAEGVLQEALDK-----DSGHPET 236 (291)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHH
Confidence 8999999999999999999999999975 3566554
No 168
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.73 E-value=0.00026 Score=73.36 Aligned_cols=96 Identities=11% Similarity=-0.093 Sum_probs=80.3
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChH
Q 012772 311 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 390 (456)
Q Consensus 311 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~ 390 (456)
....+..+..+|++++|++.+++++++ .|++ ..++.+++.+|..+|++++|++++++++.. +|.
T Consensus 60 ~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~la~~~~~~g~~~~A~~~~~~al~~--------~p~ 123 (568)
T 2vsy_A 60 VARLGRVRWTQQRHAEAAVLLQQASDA-----APEH---PGIALWLGHALEDAGQAEAAAAAYTRAHQL--------LPE 123 (568)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCC
Confidence 344566677889999999999999864 3444 567889999999999999999999999875 334
Q ss_pred HHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHH
Q 012772 391 LGLQYYTCGKLEWFL---GDTENAIKSMTEAVEIL 422 (456)
Q Consensus 391 ~~~~l~~La~~~~~~---g~~~eA~~~l~~Al~i~ 422 (456)
....++++|.++..+ |++++|.+.+++|++.-
T Consensus 124 ~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~ 158 (568)
T 2vsy_A 124 EPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQG 158 (568)
T ss_dssp CHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcC
Confidence 456789999999999 99999999999998764
No 169
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=97.73 E-value=6.6e-05 Score=79.91 Aligned_cols=94 Identities=10% Similarity=-0.022 Sum_probs=71.7
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChH
Q 012772 311 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 390 (456)
Q Consensus 311 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~ 390 (456)
....|..+...|++++|++.++++++. .|++ ..++.+++.+|..+|++++|++.+++++.+. |.
T Consensus 436 ~~~~a~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~--------P~ 499 (681)
T 2pzi_A 436 PLMEVRALLDLGDVAKATRKLDDLAER-----VGWR---WRLVWYRAVAELLTGDYDSATKHFTEVLDTF--------PG 499 (681)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHH-----HCCC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS--------TT
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhcc-----Ccch---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CC
Confidence 345566677889999999999998764 2444 5678899999999999999999999998642 22
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 391 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 391 ~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
-...+++||.++..+|++++ +..|++|+++
T Consensus 500 ~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~ 529 (681)
T 2pzi_A 500 ELAPKLALAATAELAGNTDE-HKFYQTVWST 529 (681)
T ss_dssp CSHHHHHHHHHHHHHTCCCT-TCHHHHHHHH
T ss_pred ChHHHHHHHHHHHHcCChHH-HHHHHHHHHh
Confidence 24556777777777777777 7777777764
No 170
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=97.72 E-value=0.00012 Score=72.27 Aligned_cols=93 Identities=11% Similarity=-0.011 Sum_probs=61.9
Q ss_pred HHHHhhhhcCC-hHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHH
Q 012772 313 KKTLALTSCGN-HQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 391 (456)
Q Consensus 313 ~~a~~~~~~g~-~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~ 391 (456)
..+..+...|+ +++|+..+++++.+ .|.+ ..++.+++.++..+|++++|+..++++|.+ .|.-
T Consensus 136 ~~g~~l~~~g~d~~eAl~~~~~al~l-----~P~~---~~a~~~~g~~~~~~g~~~eAl~~~~kal~l--------dP~~ 199 (382)
T 2h6f_A 136 FRRVLLKSLQKDLHEEMNYITAIIEE-----QPKN---YQVWHHRRVLVEWLRDPSQELEFIADILNQ--------DAKN 199 (382)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCCTTHHHHHHHHHHH--------CTTC
T ss_pred HHHHHHHHcccCHHHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CccC
Confidence 34445556675 88888887777653 2333 456677777777777777777777777753 2333
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 392 GLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 392 ~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
...++++|.++..+|++++|+..+++|+++
T Consensus 200 ~~a~~~lg~~~~~~g~~~eAl~~~~~al~l 229 (382)
T 2h6f_A 200 YHAWQHRQWVIQEFKLWDNELQYVDQLLKE 229 (382)
T ss_dssp HHHHHHHHHHHHHHTCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Confidence 456677777777777777777777777664
No 171
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=97.69 E-value=0.00015 Score=58.38 Aligned_cols=71 Identities=14% Similarity=0.075 Sum_probs=62.2
Q ss_pred CCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 343 HPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 343 ~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
.+..+....++..++..+...|+|++|+.++++++.. .|.....++.+|.++..+|++++|++++++|+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 79 (133)
T 2lni_A 9 SHMNPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKR--------NPKDAKLYSNRAACYTKLLEFQLALKDCEECIQL 79 (133)
T ss_dssp CCSSSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTT--------CTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHH
T ss_pred CCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 4566778899999999999999999999999999863 3334678999999999999999999999999986
No 172
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=97.69 E-value=0.00049 Score=51.47 Aligned_cols=80 Identities=19% Similarity=0.194 Sum_probs=62.0
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChH
Q 012772 311 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 390 (456)
Q Consensus 311 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~ 390 (456)
....+..+...|++++|+..+++++.. .|.+ ..++..++.++..+|++++|+.++++++.+ +|.
T Consensus 12 ~~~la~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~p~ 75 (91)
T 1na3_A 12 WYNLGNAYYKQGDYDEAIEYYQKALEL-----DPNN---AEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPN 75 (91)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTT
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHHhhHHHHHHHHHHHHhc--------CCC
Confidence 344555667789999999999999764 3444 467789999999999999999999999875 233
Q ss_pred HHHHHHHHHHHHHHcC
Q 012772 391 LGLQYYTCGKLEWFLG 406 (456)
Q Consensus 391 ~~~~l~~La~~~~~~g 406 (456)
....+.++|.++..+|
T Consensus 76 ~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 76 NAEAKQNLGNAKQKQG 91 (91)
T ss_dssp CHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhcC
Confidence 4556788888887654
No 173
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=97.69 E-value=0.00044 Score=66.70 Aligned_cols=103 Identities=9% Similarity=-0.037 Sum_probs=82.9
Q ss_pred HHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCC
Q 012772 308 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 387 (456)
Q Consensus 308 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~ 387 (456)
+......+..+...|++++|+..+++++++ .|++ ..++.+++.+|..+|++++|+.++++++.+
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~a~~~lg~~~~~~g~~~~A~~~~~~al~l-------- 259 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALEL-----DSNN---EKGLSRRGEAHLAVNDFELARADFQKVLQL-------- 259 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHH--------
Confidence 344556777788899999999999999875 3444 567889999999999999999999999875
Q ss_pred ChHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHhc
Q 012772 388 HPLLGLQYYTCGKLEWFLGDTENA-IKSMTEAVEILRITH 426 (456)
Q Consensus 388 hp~~~~~l~~La~~~~~~g~~~eA-~~~l~~Al~i~~~~~ 426 (456)
.|.....+.+||.++..+|++++| .+.|++.+..+...-
T Consensus 260 ~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 299 (336)
T 1p5q_A 260 YPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEE 299 (336)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 333456789999999999999998 557788777665543
No 174
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=97.68 E-value=0.00019 Score=58.46 Aligned_cols=67 Identities=19% Similarity=0.160 Sum_probs=58.6
Q ss_pred ccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 347 VNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 347 ~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
+.....+..++..+...|+|++|+.++++++.. .|.....++.+|.++..+|++++|+..+++|+++
T Consensus 6 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 72 (137)
T 3q49_B 6 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITR--------NPLVAVYYTNRALCYLKMQQPEQALADCRRALEL 72 (137)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh--------CcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 345677889999999999999999999999875 2344678999999999999999999999999986
No 175
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=97.68 E-value=0.00011 Score=78.24 Aligned_cols=95 Identities=13% Similarity=0.011 Sum_probs=74.4
Q ss_pred hhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 012772 319 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTC 398 (456)
Q Consensus 319 ~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~L 398 (456)
...|++++|++.+++++...-..-+..++....++..++.+|..+|++++|++.+++++.. +|.-...++++
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~l 473 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAER--------VGWRWRLVWYR 473 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------HCCCHHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhcc--------CcchHHHHHHH
Confidence 5679999999999888621111122234445567789999999999999999999999874 34446789999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHH
Q 012772 399 GKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 399 a~~~~~~g~~~eA~~~l~~Al~i 421 (456)
|.++..+|++++|++.|++|+++
T Consensus 474 g~~~~~~g~~~~A~~~~~~al~l 496 (681)
T 2pzi_A 474 AVAELLTGDYDSATKHFTEVLDT 496 (681)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHh
Confidence 99999999999999999999986
No 176
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=97.67 E-value=0.0002 Score=60.16 Aligned_cols=75 Identities=13% Similarity=0.080 Sum_probs=62.5
Q ss_pred CccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Q 012772 346 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 425 (456)
Q Consensus 346 h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~ 425 (456)
++....++..++.++...|+|++|+.++++++.. .|.-...++.+|.++..+|++++|++.|++|+++
T Consensus 17 ~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l---- 84 (148)
T 2vgx_A 17 SSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVL--------DHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVM---- 84 (148)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred CHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHc--------CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc----
Confidence 4556778889999999999999999999998864 3333566789999999999999999999999886
Q ss_pred cCCCCchH
Q 012772 426 HGTNSPFM 433 (456)
Q Consensus 426 ~G~~h~~~ 433 (456)
.|+++..
T Consensus 85 -~p~~~~~ 91 (148)
T 2vgx_A 85 -DIXEPRF 91 (148)
T ss_dssp -STTCTHH
T ss_pred -CCCCchH
Confidence 4666654
No 177
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.65 E-value=0.00035 Score=57.40 Aligned_cols=71 Identities=15% Similarity=0.062 Sum_probs=62.4
Q ss_pred CccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 346 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 346 h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
++.....+..++..+...|+|++|++++++++.. .++++.....++.+|.++..+|++++|+..+++++++
T Consensus 24 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~-----~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 24 GASSVEQLRKEGNELFKCGDYGGALAAYTQALGL-----DATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEK 94 (148)
T ss_dssp TCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-----cccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 3456778889999999999999999999998853 3566667899999999999999999999999999986
No 178
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=97.64 E-value=0.0011 Score=67.09 Aligned_cols=99 Identities=16% Similarity=0.109 Sum_probs=78.7
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChH
Q 012772 311 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 390 (456)
Q Consensus 311 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~ 390 (456)
....+..+...|++++|++.+++++.. .|.+. .++..++.++..+|++++|+.++++++.. +|.
T Consensus 313 ~~~l~~~~~~~~~~~~A~~~~~~a~~~-----~~~~~---~~~~~la~~~~~~g~~~~A~~~~~~~~~~--------~~~ 376 (537)
T 3fp2_A 313 YYHRGQMYFILQDYKNAKEDFQKAQSL-----NPENV---YPYIQLACLLYKQGKFTESEAFFNETKLK--------FPT 376 (537)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCS---HHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTT
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCC
Confidence 344556677889999999999888763 34444 56778999999999999999999998865 233
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Q 012772 391 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 425 (456)
Q Consensus 391 ~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~ 425 (456)
....++.+|.++..+|++++|+..+++|+++....
T Consensus 377 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 411 (537)
T 3fp2_A 377 LPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQ 411 (537)
T ss_dssp CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcc
Confidence 34577888999999999999999999999987543
No 179
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=97.64 E-value=0.00087 Score=67.43 Aligned_cols=114 Identities=14% Similarity=0.095 Sum_probs=87.9
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHH---ccCHHHHHHHHHHHHHHHHHhcCCCC
Q 012772 312 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME---LEDWKEALAYCQLTIPVYQRVYPQFH 388 (456)
Q Consensus 312 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~---~g~~~~A~~~~~~~l~~~e~~~g~~h 388 (456)
...+..+...|++++|+..+++++...... +.......++..++.++.. .|++++|+.++++++.. +
T Consensus 376 ~~la~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~--------~ 445 (514)
T 2gw1_A 376 NFFAEILTDKNDFDKALKQYDLAIELENKL--DGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKL--------D 445 (514)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHTS--SSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHH--------C
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHhhhcc--chHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHh--------C
Confidence 445666778899999999999998754321 2222234577899999999 99999999999999875 2
Q ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHH
Q 012772 389 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKL 440 (456)
Q Consensus 389 p~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l 440 (456)
|.....++.+|.++..+|++++|..++++|+++ .|+++.....+..+
T Consensus 446 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~-----~~~~~~~~~~~~~~ 492 (514)
T 2gw1_A 446 PRSEQAKIGLAQMKLQQEDIDEAITLFEESADL-----ARTMEEKLQAITFA 492 (514)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSSHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----ccccHHHHHHHHHH
Confidence 344567899999999999999999999999986 56666665554433
No 180
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=97.63 E-value=0.00043 Score=70.29 Aligned_cols=94 Identities=12% Similarity=0.156 Sum_probs=78.8
Q ss_pred HHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCC
Q 012772 307 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQ 386 (456)
Q Consensus 307 ~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~ 386 (456)
....+...+..+..+|++++|++.|++++.. .|++ ..++..++.+|..+|++++|++.+++++.+
T Consensus 24 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~la~~~~~~g~~~~A~~~~~~al~~------- 88 (537)
T 3fp2_A 24 YAVQLKNRGNHFFTAKNFNEAIKYYQYAIEL-----DPNE---PVFYSNISACYISTGDLEKVIEFTTKALEI------- 88 (537)
T ss_dssp HHHHHHHHHHHHHHTTCCC-CHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhh-----CCCC---cHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-------
Confidence 4566677888889999999999999999864 3444 577889999999999999999999999875
Q ss_pred CChHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 012772 387 FHPLLGLQYYTCGKLEWFLGDTENAIKSMT 416 (456)
Q Consensus 387 ~hp~~~~~l~~La~~~~~~g~~~eA~~~l~ 416 (456)
+|.-...++.+|.++..+|++++|+..|+
T Consensus 89 -~p~~~~~~~~la~~~~~~g~~~~A~~~~~ 117 (537)
T 3fp2_A 89 -KPDHSKALLRRASANESLGNFTDAMFDLS 117 (537)
T ss_dssp -CTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred -CCchHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 34455688999999999999999999883
No 181
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.61 E-value=0.00061 Score=62.89 Aligned_cols=89 Identities=15% Similarity=0.100 Sum_probs=62.0
Q ss_pred HHHHhhhh----cCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHHHHHhc
Q 012772 313 KKTLALTS----CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME----LEDWKEALAYCQLTIPVYQRVY 384 (456)
Q Consensus 313 ~~a~~~~~----~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~----~g~~~~A~~~~~~~l~~~e~~~ 384 (456)
..+..+.. .|++++|++.++++.+. + -..+...++.+|.. .+++++|++++++++..
T Consensus 43 ~lg~~~~~g~~~~~~~~~A~~~~~~a~~~-----~-----~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~----- 107 (273)
T 1ouv_A 43 NLGVLYYQGQGVEKNLKKAASFYAKACDL-----N-----YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL----- 107 (273)
T ss_dssp HHHHHHHHTSSSCCCHHHHHHHHHHHHHT-----T-----CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-----
T ss_pred HHHHHHHcCCCcCCCHHHHHHHHHHHHHC-----C-----CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc-----
Confidence 34444555 77777777777776543 1 24566777778877 78888888888777653
Q ss_pred CCCChHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHH
Q 012772 385 PQFHPLLGLQYYTCGKLEWF----LGDTENAIKSMTEAVEI 421 (456)
Q Consensus 385 g~~hp~~~~~l~~La~~~~~----~g~~~eA~~~l~~Al~i 421 (456)
. ....+++||.++.. .|++++|+++|++|++.
T Consensus 108 --~---~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~ 143 (273)
T 1ouv_A 108 --K---YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDL 143 (273)
T ss_dssp --T---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT
T ss_pred --C---CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhc
Confidence 1 24567788888887 88888888888888763
No 182
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=97.60 E-value=0.00057 Score=56.59 Aligned_cols=75 Identities=17% Similarity=0.123 Sum_probs=62.6
Q ss_pred CccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Q 012772 346 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 425 (456)
Q Consensus 346 h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~ 425 (456)
++.-...+..++..+...|+|++|+.++++++.. +|.-...++.+|.++..+|++++|++.|++|+++
T Consensus 14 ~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---- 81 (142)
T 2xcb_A 14 SEDTLEQLYALGFNQYQAGKWDDAQKIFQALCML--------DHYDARYFLGLGACRQSLGLYEQALQSYSYGALM---- 81 (142)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred CHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc----
Confidence 4556777889999999999999999999998853 3334567889999999999999999999999986
Q ss_pred cCCCCchH
Q 012772 426 HGTNSPFM 433 (456)
Q Consensus 426 ~G~~h~~~ 433 (456)
.|++|..
T Consensus 82 -~p~~~~~ 88 (142)
T 2xcb_A 82 -DINEPRF 88 (142)
T ss_dssp -CTTCTHH
T ss_pred -CCCCcHH
Confidence 4666654
No 183
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=97.58 E-value=0.0016 Score=51.03 Aligned_cols=78 Identities=9% Similarity=-0.064 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCC
Q 012772 351 QTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNS 430 (456)
Q Consensus 351 ~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h 430 (456)
.-...||..+..+|+|..|+.++++++.....-.. .-+.....+..||.++..+|++++|..++++|+. +.|+|
T Consensus 6 ~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~-----l~P~~ 79 (104)
T 2v5f_A 6 EDCFELGKVAYTEADYYHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLE-----LDPEH 79 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-----HCTTC
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHh-----cCCCC
Confidence 33457899999999999999999999987652211 1245678889999999999999999999999987 47788
Q ss_pred chHH
Q 012772 431 PFMK 434 (456)
Q Consensus 431 ~~~~ 434 (456)
+...
T Consensus 80 ~~~~ 83 (104)
T 2v5f_A 80 QRAN 83 (104)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6653
No 184
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=97.55 E-value=0.00054 Score=55.30 Aligned_cols=69 Identities=12% Similarity=-0.008 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCc
Q 012772 352 TREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSP 431 (456)
Q Consensus 352 ~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~ 431 (456)
....++..+...|++++|+..+++++.. .|.-...++.||.++..+|++++|+..|++|+++ .|+++
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l-----~P~~~ 85 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQK--------EPEREEAWRSLGLTQAENEKDGLAIIALNHARML-----DPKDI 85 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCH
Confidence 3567888999999999999999999863 4444678899999999999999999999999986 45665
Q ss_pred hH
Q 012772 432 FM 433 (456)
Q Consensus 432 ~~ 433 (456)
..
T Consensus 86 ~~ 87 (121)
T 1hxi_A 86 AV 87 (121)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 185
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=97.52 E-value=0.00055 Score=54.48 Aligned_cols=67 Identities=15% Similarity=0.181 Sum_probs=57.9
Q ss_pred ccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 347 VNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 347 ~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
+.....+..++..+...|++++|+.++++++.. +|.....++.+|.++..+|++++|+..+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 75 (131)
T 2vyi_A 9 SAEAERLKTEGNEQMKVENFEAAVHFYGKAIEL--------NPANAVYFCNRAAAYSKLGNYAGAVQDCERAICI 75 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHc--------CCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhc
Confidence 445677788999999999999999999999864 2334678999999999999999999999999985
No 186
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=97.50 E-value=0.00062 Score=53.69 Aligned_cols=64 Identities=23% Similarity=0.351 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 350 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 350 ~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
..++..++.++...|++++|++++++++.. . |.....++.+|.++...|++++|+.++++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~----~----~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 72 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALEL----D----PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----C----TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH----C----cCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 567788999999999999999999999864 2 233567899999999999999999999999875
No 187
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=97.49 E-value=5.7e-05 Score=58.81 Aligned_cols=63 Identities=13% Similarity=0.140 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 351 QTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 351 ~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
.++..++.++...|++++|+.++++++.. . |.....++.+|.++..+|++++|++.+++|+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~----~----~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 69 (112)
T 2kck_A 7 EEYYLEGVLQYDAGNYTESIDLFEKAIQL----D----PEESKYWLMKGKALYNLERYEEAVDCYNYVINV 69 (112)
T ss_dssp TGGGGHHHHHHSSCCHHHHHHHHHHHHHH----C----CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHh----C----cCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 34567889999999999999999999864 2 223557899999999999999999999999976
No 188
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=97.48 E-value=0.00041 Score=53.22 Aligned_cols=67 Identities=28% Similarity=0.367 Sum_probs=55.5
Q ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCch
Q 012772 354 EKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL-QYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPF 432 (456)
Q Consensus 354 ~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~-~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~ 432 (456)
...+..+...|+|++|++++++++.. +|.-.. .++.+|.++..+|++++|++.|++|+++ .|+++.
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-----~p~~~~ 70 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQT--------EPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIEL-----NPDSPA 70 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH--------CSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTSTH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCcHH
Confidence 35778899999999999999999874 233345 8899999999999999999999999976 456654
Q ss_pred H
Q 012772 433 M 433 (456)
Q Consensus 433 ~ 433 (456)
.
T Consensus 71 ~ 71 (99)
T 2kc7_A 71 L 71 (99)
T ss_dssp H
T ss_pred H
Confidence 4
No 189
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=97.47 E-value=0.00087 Score=52.27 Aligned_cols=65 Identities=12% Similarity=0.073 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 349 LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 349 ~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
....+..++..+...|+|++|+.++++++.. . +. -...++.+|.++..+|++++|...+++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~----~-~~---~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKL----D-PH---NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----C-TT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHH----C-CC---cHHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 3566788999999999999999999999864 2 22 3567899999999999999999999999986
No 190
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=97.45 E-value=0.00015 Score=72.92 Aligned_cols=84 Identities=15% Similarity=0.185 Sum_probs=60.1
Q ss_pred CCCHHHHHHHHhhHhccccccccCCCCcceeeeccccccccCCCcCCC---eeEEe--------CCEEEEEEecCCCCCC
Q 012772 183 EISINEIAENFSKLACNAHTICNSELRPLGTGLYPVISIINHSCLPNA---VLVFE--------GRLAVVRAVQHVPKGA 251 (456)
Q Consensus 183 ~~~~~~l~~~~~~~~~N~~~i~~~~~~~~g~glyp~~sl~NHSC~PN~---~~~f~--------~~~~~vra~~~I~~Ge 251 (456)
.++.+...-.++.+.+.+|.+.+. -+.+|.|.+-|+||||.||. ...++ ++.++++|.++|++||
T Consensus 158 ~~t~~~f~wA~~~v~SRaf~~~~~----~~~~LvP~~D~~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~i~~Ge 233 (440)
T 2h21_A 158 PVTLDDFFWAFGILRSRAFSRLRN----ENLVVVPMADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGE 233 (440)
T ss_dssp CCCHHHHHHHHHHHHHHCBCCC-------CCBCCSSTTSCEECTTCCCCCCEEEC----------CEEEEEESSCBCTTS
T ss_pred CCCHHHHHHHHHHhcccceeccCC----CceEEeechHhhcCCCCcccccceeeecCcccccCCCceEEEEECCCCCCCC
Confidence 356777777888888888865432 35799999999999999974 22322 3579999999999999
Q ss_pred ccc--CChh-hHHHh--hCCcccc
Q 012772 252 EGQ--FDDI-QESAI--LEGYRCK 270 (456)
Q Consensus 252 e~~--~~~~-r~~~l--~~~f~C~ 270 (456)
||+ |.+. --..| ..||...
T Consensus 234 ei~~sYG~~~~N~~LL~~YGFv~~ 257 (440)
T 2h21_A 234 QVYIQYDLNKSNAELALDYGFIEP 257 (440)
T ss_dssp BCEECSCTTCCHHHHHHHSSCCCS
T ss_pred EEEEeCCCCCCHHHHHHhCCCCcC
Confidence 975 6654 33333 3588665
No 191
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=97.41 E-value=0.00067 Score=58.39 Aligned_cols=68 Identities=13% Similarity=-0.047 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 012772 349 LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 422 (456)
Q Consensus 349 ~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~ 422 (456)
-..++..++.++..+|++++|+.++++++.. .|. + .-...++.||.++..+|+.++|+..|++++..+
T Consensus 107 ~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~----~p~-~-~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~~~ 174 (176)
T 2r5s_A 107 NFELACELAVQYNQVGRDEEALELLWNILKV----NLG-A-QDGEVKKTFMDILSALGQGNAIASKYRRQLYSI 174 (176)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT----CTT-T-TTTHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcccHHHHHHHHHHHHHh----Ccc-c-ChHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 3567788999999999999999999998753 221 1 113467899999999999999999999998754
No 192
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=97.36 E-value=0.00022 Score=57.00 Aligned_cols=62 Identities=19% Similarity=0.095 Sum_probs=48.7
Q ss_pred HccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchH
Q 012772 362 ELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM 433 (456)
Q Consensus 362 ~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~ 433 (456)
.+|++++|+.++++++.+ +..+|.....+++||.++..+|++++|+..+++|+++ .|+++.+
T Consensus 2 ~~g~~~~A~~~~~~al~~-----~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~ 63 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIAS-----GLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQ-----FPNHQAL 63 (117)
T ss_dssp -----CCCHHHHHHHHSS-----CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHH
T ss_pred CCCcHHHHHHHHHHHHHc-----CCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCchHH
Confidence 468999999999999863 3457899999999999999999999999999999986 4555443
No 193
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.35 E-value=0.0014 Score=61.38 Aligned_cols=87 Identities=14% Similarity=0.064 Sum_probs=45.1
Q ss_pred hhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHH-HHHH
Q 012772 317 ALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL-GLQY 395 (456)
Q Consensus 317 ~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~-~~~l 395 (456)
.+...|+|++|.++++.+.. .+| .-. ....++.++.+.|+|++|+.++++++. ..+|.. ....
T Consensus 111 ~L~~~g~y~eA~~~l~~~~~-----~~p---~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~-------~~d~~~~~~a~ 174 (282)
T 4f3v_A 111 CEAAQGNYADAMEALEAAPV-----AGS---EHL-VAWMKAVVYGAAERWTDVIDQVKSAGK-------WPDKFLAGAAG 174 (282)
T ss_dssp HHHHHTCHHHHHHHHTSSCC-----TTC---HHH-HHHHHHHHHHHTTCHHHHHHHHTTGGG-------CSCHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHh-----cCC---chH-HHHHHHHHHHHcCCHHHHHHHHHHhhc-------cCCcccHHHHH
Confidence 34455677777665543321 122 222 445555566666666666666543321 114433 2355
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHH
Q 012772 396 YTCGKLEWFLGDTENAIKSMTEAV 419 (456)
Q Consensus 396 ~~La~~~~~~g~~~eA~~~l~~Al 419 (456)
+.||.++..+|++++|+..|++|.
T Consensus 175 ~~LG~al~~LG~~~eAl~~l~~a~ 198 (282)
T 4f3v_A 175 VAHGVAAANLALFTEAERRLTEAN 198 (282)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHh
Confidence 666666666666666666666554
No 194
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.34 E-value=0.0025 Score=59.59 Aligned_cols=93 Identities=9% Similarity=-0.080 Sum_probs=73.4
Q ss_pred HhhhhcCChHHHHHHHHHHHHHHHhhcCCCCcc-HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChH-HHH
Q 012772 316 LALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN-LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL-LGL 393 (456)
Q Consensus 316 ~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~-~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~-~~~ 393 (456)
..+...++|++|+..++.+. -.| ++. ...+...|+.++..+|++++|+.++++++. |+.-|. ...
T Consensus 143 ~l~~~~~r~~dA~~~l~~a~------~~~-d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~------g~~~P~~~~d 209 (282)
T 4f3v_A 143 VVYGAAERWTDVIDQVKSAG------KWP-DKFLAGAAGVAHGVAAANLALFTEAERRLTEAND------SPAGEACARA 209 (282)
T ss_dssp HHHHHTTCHHHHHHHHTTGG------GCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT------STTTTTTHHH
T ss_pred HHHHHcCCHHHHHHHHHHhh------ccC-CcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhc------CCCCccccHH
Confidence 34567899999998876331 112 333 356889999999999999999999998762 332266 666
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 394 QYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 394 ~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
.++.+|.++..+|+.++|...|++++++
T Consensus 210 a~~~~glaL~~lGr~deA~~~l~~a~a~ 237 (282)
T 4f3v_A 210 IAWYLAMARRSQGNESAAVALLEWLQTT 237 (282)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 8899999999999999999999999884
No 195
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=97.34 E-value=0.00087 Score=58.77 Aligned_cols=71 Identities=8% Similarity=-0.078 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChH----------HHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 012772 349 LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL----------LGLQYYTCGKLEWFLGDTENAIKSMTEA 418 (456)
Q Consensus 349 ~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~----------~~~~l~~La~~~~~~g~~~eA~~~l~~A 418 (456)
.+..+..++..+...|+|++|+.++++++.+... . +++.. ....++++|.++..+|++++|+..+++|
T Consensus 37 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 114 (198)
T 2fbn_A 37 SAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH-T-EEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKV 114 (198)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT-C-TTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc-c-cccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 4566788999999999999999999999875322 1 11111 2478999999999999999999999999
Q ss_pred HHH
Q 012772 419 VEI 421 (456)
Q Consensus 419 l~i 421 (456)
+++
T Consensus 115 l~~ 117 (198)
T 2fbn_A 115 LKI 117 (198)
T ss_dssp HHH
T ss_pred HHh
Confidence 987
No 196
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.32 E-value=0.0019 Score=59.46 Aligned_cols=89 Identities=19% Similarity=0.134 Sum_probs=71.4
Q ss_pred HHHHhhhh----cCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHHHHHhc
Q 012772 313 KKTLALTS----CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME----LEDWKEALAYCQLTIPVYQRVY 384 (456)
Q Consensus 313 ~~a~~~~~----~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~----~g~~~~A~~~~~~~l~~~e~~~ 384 (456)
..+..+.. .+++++|++.++++.+. . -..+...++.+|.. .|++++|+.++++++..
T Consensus 79 ~lg~~~~~g~~~~~~~~~A~~~~~~a~~~-------~---~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~----- 143 (273)
T 1ouv_A 79 LLGNLYYSGQGVSQNTNKALQYYSKACDL-------K---YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDL----- 143 (273)
T ss_dssp HHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------T---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT-----
T ss_pred HHHHHHhCCCCcccCHHHHHHHHHHHHHc-------C---CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhc-----
Confidence 34445667 89999999998888653 1 25678889999999 99999999999998863
Q ss_pred CCCChHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHH
Q 012772 385 PQFHPLLGLQYYTCGKLEWF----LGDTENAIKSMTEAVEI 421 (456)
Q Consensus 385 g~~hp~~~~~l~~La~~~~~----~g~~~eA~~~l~~Al~i 421 (456)
.+ ...+++||.++.. .+++++|+++|++|++.
T Consensus 144 --~~---~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~ 179 (273)
T 1ouv_A 144 --ND---GDGCTILGSLYDAGRGTPKDLKKALASYDKACDL 179 (273)
T ss_dssp --TC---HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred --Cc---HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 12 4568889999998 89999999999999875
No 197
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=97.31 E-value=0.00054 Score=67.10 Aligned_cols=72 Identities=15% Similarity=0.217 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh--------cCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 350 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRV--------YPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 350 ~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~--------~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
+..+..++..+...|+|++|+.++++++.+.... ....+|..+..++++|.++..+|++++|+.++++|+++
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 4556788999999999999999999999876542 11257888999999999999999999999999999985
No 198
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=97.30 E-value=0.00041 Score=64.99 Aligned_cols=64 Identities=20% Similarity=0.188 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 350 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 350 ~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
...+..+|..+...|+|++|+.++++++.. +|..+..++++|.++..+|++++|+..+++|+++
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 67 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITR--------NPLVAVYYTNRALCYLKMQQPEQALADCRRALEL 67 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 466788999999999999999999999875 4455678999999999999999999999999975
No 199
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=97.24 E-value=0.0011 Score=50.74 Aligned_cols=85 Identities=15% Similarity=0.158 Sum_probs=60.5
Q ss_pred HHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHH-HHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHH
Q 012772 313 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQ-TREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 391 (456)
Q Consensus 313 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~-~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~ 391 (456)
..+..+...|++++|+..++++++. .|.+ .. ++..++.+|..+|++++|++++++++.+ .++++..
T Consensus 5 ~~a~~~~~~~~~~~A~~~~~~al~~-----~p~~---~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~ 71 (99)
T 2kc7_A 5 KTIKELINQGDIENALQALEEFLQT-----EPVG---KDEAYYLMGNAYRKLGDWQKALNNYQSAIEL-----NPDSPAL 71 (99)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH-----CSST---HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTSTHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHH-----CCCc---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCcHHH
Confidence 4555667789999999999998764 3444 34 7789999999999999999999999864 3444432
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 392 GLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 392 ~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
- . .+.+.++...|+++..+
T Consensus 72 ~---~--------~~~~~~a~~~~~~~~~~ 90 (99)
T 2kc7_A 72 Q---A--------RKMVMDILNFYNKDMYN 90 (99)
T ss_dssp H---H--------HHHHHHHHHHHCCTTHH
T ss_pred H---H--------HHHHHHHHHHHHHHhcc
Confidence 1 1 14455666666655443
No 200
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.18 E-value=0.0018 Score=60.69 Aligned_cols=68 Identities=15% Similarity=0.034 Sum_probs=58.1
Q ss_pred ccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHH--HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 012772 347 VNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL--GLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 422 (456)
Q Consensus 347 ~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~--~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~ 422 (456)
|.-..++.+++.+|..+|++++|+..+++++.. +|.. +..+.+|+.++..+|+.++|...|++++..+
T Consensus 216 P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~--------~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~~~ 285 (287)
T 3qou_A 216 PEDAALATQLALQLHQVGRNEEALELLFGHLRX--------DLTAADGQTRXTFQEILAALGTGDALASXYRRQLYAL 285 (287)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHcccHHHHHHHHHHHHhc--------ccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHHHh
Confidence 334567889999999999999999999999864 3333 6778999999999999999999999999865
No 201
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=97.09 E-value=0.0015 Score=65.92 Aligned_cols=75 Identities=8% Similarity=0.058 Sum_probs=61.7
Q ss_pred ccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcC-------CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 012772 347 VNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYP-------QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAV 419 (456)
Q Consensus 347 ~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g-------~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al 419 (456)
+.....+.+++..+..+|+|++|+.++++++.+...... ...+..+..++++|.++..+|++++|+..+++|+
T Consensus 265 ~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al 344 (457)
T 1kt0_A 265 LEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKAL 344 (457)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 345778889999999999999999999999986432100 0134567899999999999999999999999999
Q ss_pred HH
Q 012772 420 EI 421 (456)
Q Consensus 420 ~i 421 (456)
++
T Consensus 345 ~~ 346 (457)
T 1kt0_A 345 GL 346 (457)
T ss_dssp HH
T ss_pred hc
Confidence 86
No 202
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.01 E-value=0.0037 Score=48.27 Aligned_cols=62 Identities=16% Similarity=0.105 Sum_probs=51.2
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Q 012772 312 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQ 381 (456)
Q Consensus 312 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e 381 (456)
...+..+...|++++|+..+++++++ .|+++ .++..++.+|..+|++++|++++++++.+..
T Consensus 11 ~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~ 72 (100)
T 3ma5_A 11 YALAQEHLKHDNASRALALFEELVET-----DPDYV---GTYYHLGKLYERLDRTDDAIDTYAQGIEVAR 72 (100)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----STTCT---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhhhh
Confidence 44556677889999999999999864 34443 4778999999999999999999999998754
No 203
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=96.86 E-value=0.0035 Score=59.15 Aligned_cols=83 Identities=11% Similarity=0.036 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Q 012772 325 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF 404 (456)
Q Consensus 325 ~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~ 404 (456)
++|+..++++++ .+.|.+ ..++..++.++..+|++++|...+++++.+ ++.++.. .+.++|.++..
T Consensus 81 ~~A~~~~~rAl~----~~~p~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~--~~~~~~~~~~~ 146 (308)
T 2ond_A 81 DEAANIYERAIS----TLLKKN---MLLYFAYADYEESRMKYEKVHSIYNRLLAI-----EDIDPTL--VYIQYMKFARR 146 (308)
T ss_dssp HHHHHHHHHHHT----TTTTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTS-----SSSCTHH--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----HhCccc---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhc-----cccCccH--HHHHHHHHHHH
Confidence 788888888764 134444 456778888888999999999999998863 4444432 67778888888
Q ss_pred cCCHHHHHHHHHHHHHH
Q 012772 405 LGDTENAIKSMTEAVEI 421 (456)
Q Consensus 405 ~g~~~eA~~~l~~Al~i 421 (456)
+|++++|++.|++|+++
T Consensus 147 ~~~~~~A~~~~~~a~~~ 163 (308)
T 2ond_A 147 AEGIKSGRMIFKKARED 163 (308)
T ss_dssp HHCHHHHHHHHHHHHTS
T ss_pred hcCHHHHHHHHHHHHhc
Confidence 88888888888888763
No 204
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=96.86 E-value=0.0035 Score=55.75 Aligned_cols=65 Identities=12% Similarity=-0.029 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHH----ccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHH
Q 012772 351 QTREKLIKILME----LEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF----LGDTENAIKSMTEAVEI 421 (456)
Q Consensus 351 ~~~~~L~~~~~~----~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~----~g~~~eA~~~l~~Al~i 421 (456)
.+..+|+.+|.. .+++++|++++++++.. ..+...+..+++||.+|.. .+++++|+.+|++|.+.
T Consensus 86 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~------~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 86 SGEIVLARVLVNRQAGATDVAHAITLLQDAARD------SESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSS------TTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHc------CCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 445556666655 55666666666655431 1122567777788888877 67778888888887654
No 205
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=96.77 E-value=0.034 Score=43.23 Aligned_cols=79 Identities=6% Similarity=-0.118 Sum_probs=59.5
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHH
Q 012772 312 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 391 (456)
Q Consensus 312 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~ 391 (456)
.+.+..+..+|+|.+|+..++.++......- ........++..|+.++.++|++++|+.++++++. +-|+|+..
T Consensus 9 ~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~-~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~-----l~P~~~~~ 82 (104)
T 2v5f_A 9 FELGKVAYTEADYYHTELWMEQALRQLDEGE-ISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLE-----LDPEHQRA 82 (104)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHTTC-CCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-----HCTTCHHH
T ss_pred HHHHHHHHHccchHHHHHHHHHHHHhhhccC-CCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHh-----cCCCCHHH
Confidence 4556667788999999999999987643211 01345678889999999999999999999999985 35677665
Q ss_pred HHHHHHHH
Q 012772 392 GLQYYTCG 399 (456)
Q Consensus 392 ~~~l~~La 399 (456)
+.+++
T Consensus 83 ---~~n~~ 87 (104)
T 2v5f_A 83 ---NGNLK 87 (104)
T ss_dssp ---HHHHH
T ss_pred ---HhhHH
Confidence 44444
No 206
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=96.77 E-value=0.0099 Score=56.00 Aligned_cols=95 Identities=11% Similarity=-0.050 Sum_probs=50.1
Q ss_pred hcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH-------------HH-hcC
Q 012772 320 SCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVY-------------QR-VYP 385 (456)
Q Consensus 320 ~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~-------------e~-~~g 385 (456)
..|++++|++.|+++++ +.|.++.. ++.+++.++..+|++++|+..+++++..- +. ..|
T Consensus 111 ~~~~~~~A~~~~~~al~-----~~p~~~~~--~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~ 183 (308)
T 2ond_A 111 SRMKYEKVHSIYNRLLA-----IEDIDPTL--VYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSK 183 (308)
T ss_dssp HTTCHHHHHHHHHHHHT-----SSSSCTHH--HHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSC
T ss_pred hcCCHHHHHHHHHHHHh-----ccccCccH--HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcC
Confidence 35666666666666653 23444321 44555555556666666666655554320 00 000
Q ss_pred C-------------CChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 386 Q-------------FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 386 ~-------------~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
. .+|.....+.++|.++..+|++++|+..|++|++.
T Consensus 184 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 184 DKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 0 01222345566666676777777777777777653
No 207
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.75 E-value=0.034 Score=47.08 Aligned_cols=101 Identities=14% Similarity=0.162 Sum_probs=72.8
Q ss_pred HHHHhhhhcCChHHHHHHHHHHHHHHHh---hcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCC-
Q 012772 313 KKTLALTSCGNHQEVVSTYKMIEKLQKK---LYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH- 388 (456)
Q Consensus 313 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~---~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~h- 388 (456)
+....+.+.|.|+.|+-+...++.+... ++.| ..-++++..+|+++...|+|.+|..+++++|...+.+. ...
T Consensus 25 dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp--~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~-k~~s 101 (167)
T 3ffl_A 25 DHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSP--PQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALS-KTSK 101 (167)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCH--HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC------
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccH--HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHh-cCCC
Confidence 3344455678999998888877766432 1111 12467788899999999999999999999999887432 211
Q ss_pred -----------------hHHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 012772 389 -----------------PLLGLQYYTCGKLEWFLGDTENAIKSMT 416 (456)
Q Consensus 389 -----------------p~~~~~l~~La~~~~~~g~~~eA~~~l~ 416 (456)
+.=...-|++|..+.++|++++|+..|+
T Consensus 102 ~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le 146 (167)
T 3ffl_A 102 VRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILD 146 (167)
T ss_dssp ---------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 1112467899999999999999887765
No 208
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=96.74 E-value=0.013 Score=52.01 Aligned_cols=84 Identities=12% Similarity=0.005 Sum_probs=54.2
Q ss_pred cCChHHHHHHHHHHHHHHHhhcCCCCc--cHHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHHHHHhcCCCChHHHHH
Q 012772 321 CGNHQEVVSTYKMIEKLQKKLYHPFSV--NLMQTREKLIKILME----LEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQ 394 (456)
Q Consensus 321 ~g~~~~a~~~~~~~~~~~~~~l~p~h~--~~~~~~~~L~~~~~~----~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~ 394 (456)
.+++++|++.++++.+ ..+ ....+..+|+.+|.. .+++++|+.++++++.. +.++. .
T Consensus 102 ~~d~~~A~~~~~~A~~--------~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~------~~~~~---a 164 (212)
T 3rjv_A 102 ATDVAHAITLLQDAAR--------DSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL------SRTGY---A 164 (212)
T ss_dssp SCCHHHHHHHHHHHTS--------STTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT------SCTTH---H
T ss_pred ccCHHHHHHHHHHHHH--------cCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc------CCCHH---H
Confidence 4555555555554432 112 347777777777777 67788888887777531 45554 5
Q ss_pred HHHHHHHHHHc-C-----CHHHHHHHHHHHHHH
Q 012772 395 YYTCGKLEWFL-G-----DTENAIKSMTEAVEI 421 (456)
Q Consensus 395 l~~La~~~~~~-g-----~~~eA~~~l~~Al~i 421 (456)
+++||.+|... | ++++|+.+|++|.+.
T Consensus 165 ~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~ 197 (212)
T 3rjv_A 165 EYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLE 197 (212)
T ss_dssp HHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHc
Confidence 77777777654 3 677777777777765
No 209
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=96.66 E-value=0.00098 Score=56.27 Aligned_cols=39 Identities=15% Similarity=0.058 Sum_probs=33.5
Q ss_pred ccccccCCCcC---CCeeEEeCCEEEEEEecCCCCCCcccCC
Q 012772 218 VISIINHSCLP---NAVLVFEGRLAVVRAVQHVPKGAEGQFD 256 (456)
Q Consensus 218 ~~sl~NHSC~P---N~~~~f~~~~~~vra~~~I~~Gee~~~~ 256 (456)
-+.++||+|.| |+...-.++++.++|+|+|++|+|+.+.
T Consensus 97 WmR~Vn~A~~~~eqNl~a~q~~~~I~~~a~rdI~pGeELlv~ 138 (151)
T 3db5_A 97 WMMFVRKARNREEQNLVAYPHDGKIFFCTSQDIPPENELLFY 138 (151)
T ss_dssp GGGGCEECSSTTTCCEEEEEETTEEEEEESSCBCTTCBCEEE
T ss_pred ceeEEEecCCcccCceEEEEECCEEEEEEccccCCCCEEEEe
Confidence 34678999976 9988777999999999999999998743
No 210
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=96.61 E-value=0.046 Score=45.78 Aligned_cols=84 Identities=14% Similarity=0.069 Sum_probs=67.4
Q ss_pred cHHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHHHHHhcCCCCh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Q 012772 348 NLMQTREKLIKILMELE---DWKEALAYCQLTIPVYQRVYPQFHP-LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILR 423 (456)
Q Consensus 348 ~~~~~~~~L~~~~~~~g---~~~~A~~~~~~~l~~~e~~~g~~hp-~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~ 423 (456)
...++..+++.++.+.+ ++++++.+++.++.. ++| .....+|+||..+.++|+|++|++++++++++
T Consensus 30 ~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~-------~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~i-- 100 (152)
T 1pc2_A 30 VSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPK-------GSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT-- 100 (152)
T ss_dssp CCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHH-------SCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH--
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-------CCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhc--
Confidence 46788889999999876 777898888877653 256 56778999999999999999999999999986
Q ss_pred HhcCCCCchHHHHHHHHHHH
Q 012772 424 ITHGTNSPFMKELILKLEEA 443 (456)
Q Consensus 424 ~~~G~~h~~~~~~~~~l~~~ 443 (456)
-|+|+....+...+.+.
T Consensus 101 ---eP~n~QA~~Lk~~ie~~ 117 (152)
T 1pc2_A 101 ---EPQNNQAKELERLIDKA 117 (152)
T ss_dssp ---CTTCHHHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHHH
Confidence 46777777666665544
No 211
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=96.59 E-value=0.019 Score=47.21 Aligned_cols=87 Identities=15% Similarity=0.096 Sum_probs=69.0
Q ss_pred HHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHHHHHhcCCCChH
Q 012772 315 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME----LEDWKEALAYCQLTIPVYQRVYPQFHPL 390 (456)
Q Consensus 315 a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~----~g~~~~A~~~~~~~l~~~e~~~g~~hp~ 390 (456)
+..+...+.+++|++.++++.+. . -..+..+|+.+|.. .+++++|+++++++.+. .+
T Consensus 32 g~~y~~g~~~~~A~~~~~~Aa~~-------g---~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~-------g~-- 92 (138)
T 1klx_A 32 SLVSNSQINKQKLFQYLSKACEL-------N---SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL-------ND-- 92 (138)
T ss_dssp HHHTCTTSCHHHHHHHHHHHHHT-------T---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT-------TC--
T ss_pred HHHHHcCCCHHHHHHHHHHHHcC-------C---CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC-------CC--
Confidence 33444556778888888887643 1 25778899999998 89999999999998753 23
Q ss_pred HHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHH
Q 012772 391 LGLQYYTCGKLEWF----LGDTENAIKSMTEAVEI 421 (456)
Q Consensus 391 ~~~~l~~La~~~~~----~g~~~eA~~~l~~Al~i 421 (456)
...+++||.+|.. .+++++|+++|++|.+.
T Consensus 93 -~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 93 -QDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp -HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC
Confidence 4578999999999 89999999999999874
No 212
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.58 E-value=0.016 Score=44.29 Aligned_cols=83 Identities=10% Similarity=0.014 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHHccC---HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhc
Q 012772 350 MQTREKLIKILMELED---WKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITH 426 (456)
Q Consensus 350 ~~~~~~L~~~~~~~g~---~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~ 426 (456)
...+..++.++...++ .++|..+++++|. ..|.-...++.||.++...|+|++|+.+++++++.
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~--------~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~----- 72 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQ--------LEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDS----- 72 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHH--------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHH--------HCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----
Confidence 4455667777665443 6899999999996 35555667888899999999999999999998763
Q ss_pred CCCCchHHHHHHHHHHHHH
Q 012772 427 GTNSPFMKELILKLEEAQA 445 (456)
Q Consensus 427 G~~h~~~~~~~~~l~~~~~ 445 (456)
.|+.|....+...++.++.
T Consensus 73 ~p~~~~~~~i~~~I~~A~~ 91 (93)
T 3bee_A 73 NDPNLDRVTIIESINKAKK 91 (93)
T ss_dssp CCTTCCHHHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHh
Confidence 4457777778888887764
No 213
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=96.49 E-value=0.0042 Score=59.79 Aligned_cols=96 Identities=8% Similarity=-0.139 Sum_probs=51.1
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCCh
Q 012772 310 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 389 (456)
Q Consensus 310 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp 389 (456)
.....+..+...|++++|+..+++++++ .|++ ..++.+++.+|..+|+|++|+.++++++.+. |
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~--------p 295 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTE-----EEKN---PKALFRRGKAKAELGQMDSARDDFRKAQKYA--------P 295 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC--------C
Confidence 3455677788899999999999999864 3444 5778999999999999999999999998642 3
Q ss_pred HHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHH
Q 012772 390 LLGLQYYTCGKLE-WFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 390 ~~~~~l~~La~~~-~~~g~~~eA~~~l~~Al~i 421 (456)
.-...+..|+.+. ...+..+++...|.+++..
T Consensus 296 ~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~ 328 (338)
T 2if4_A 296 DDKAIRRELRALAEQEKALYQKQKEMYKGIFKG 328 (338)
T ss_dssp ---------------------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 3344566677763 3456677778888877654
No 214
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=96.47 E-value=0.0015 Score=56.03 Aligned_cols=38 Identities=18% Similarity=0.149 Sum_probs=33.0
Q ss_pred cccccCCCc---CCCeeEEeCCEEEEEEecCCCCCCcccCC
Q 012772 219 ISIINHSCL---PNAVLVFEGRLAVVRAVQHVPKGAEGQFD 256 (456)
Q Consensus 219 ~sl~NHSC~---PN~~~~f~~~~~~vra~~~I~~Gee~~~~ 256 (456)
+.++||+|. +|+...-.++++.++|+|+|++|+|+.+.
T Consensus 102 mR~Vn~A~~~~eqNl~a~q~~~~I~~~a~RdI~pGeELlvw 142 (170)
T 3ep0_A 102 MTYIKCARNEQEQNLEVVQIGTSIFYKAIEMIPPDQELLVW 142 (170)
T ss_dssp GGGCEECSSTTTCCEEEEEETTEEEEEESSCBCTTCBCEEE
T ss_pred eeeEEecCCcccCCeeeEEECCEEEEEECcCcCCCCEEEEe
Confidence 357899997 89887777899999999999999998754
No 215
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=96.45 E-value=0.021 Score=44.76 Aligned_cols=63 Identities=11% Similarity=-0.029 Sum_probs=51.7
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Q 012772 311 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQ 381 (456)
Q Consensus 311 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e 381 (456)
....+..+...|++++|+..+++++.+ .|.+ ..++..++.+|..+|++++|+.++++++.+..
T Consensus 22 ~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 84 (115)
T 2kat_A 22 RFTLGKTYAEHEQFDAALPHLRAALDF-----DPTY---SVAWKWLGKTLQGQGDRAGARQAWESGLAAAQ 84 (115)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHH-----CCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcc
Confidence 344566677889999999999999864 3444 56778999999999999999999999998754
No 216
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=96.04 E-value=0.0034 Score=55.02 Aligned_cols=39 Identities=13% Similarity=0.065 Sum_probs=33.7
Q ss_pred cccccCCCc---CCCeeEEeCCEEEEEEecCCCCCCcccCCh
Q 012772 219 ISIINHSCL---PNAVLVFEGRLAVVRAVQHVPKGAEGQFDD 257 (456)
Q Consensus 219 ~sl~NHSC~---PN~~~~f~~~~~~vra~~~I~~Gee~~~~~ 257 (456)
+.++||+|. +|+...-.++++.++|+|+|++|+|+.+.+
T Consensus 132 mRfVn~A~~~~eqNl~a~q~~~~I~y~a~RdI~pGeELlvwY 173 (196)
T 3dal_A 132 MRYVNPAHSPREQNLAACQNGMNIYFYTIKPIPANQELLVWY 173 (196)
T ss_dssp GGGCEECSSTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEE
T ss_pred EEeEEecCCcccCCcEEEEECCEEEEEECcccCCCCEEEEec
Confidence 467899997 798887779999999999999999988543
No 217
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=95.82 E-value=0.096 Score=51.30 Aligned_cols=122 Identities=7% Similarity=0.029 Sum_probs=84.3
Q ss_pred HHHHHHHhhhhcCChHHHHHHHHHHHHHHHh-hcCCC--C-----------ccHHHHHHHHHHHHHHccCHHHHHHHHHH
Q 012772 310 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKK-LYHPF--S-----------VNLMQTREKLIKILMELEDWKEALAYCQL 375 (456)
Q Consensus 310 ~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~-~l~p~--h-----------~~~~~~~~~L~~~~~~~g~~~~A~~~~~~ 375 (456)
.+...+......|+.++|.+.+++++.+++. .|... . .....+...++..+...|++.+|+..+.+
T Consensus 117 ~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~ 196 (388)
T 2ff4_A 117 AEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEA 196 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 3333444444567888888888888877643 22211 1 12234455667778889999999999888
Q ss_pred HHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCC-chHHHHHHH
Q 012772 376 TIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNS-PFMKELILK 439 (456)
Q Consensus 376 ~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h-~~~~~~~~~ 439 (456)
++. .||..=..+..|-.++...|+..+|+..|++..+.+...+|-+- |.+..+...
T Consensus 197 ~~~--------~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~~l~~l~~~ 253 (388)
T 2ff4_A 197 LTF--------EHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTLRALNER 253 (388)
T ss_dssp HHH--------HSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHH
T ss_pred HHH--------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 764 24444456667777888999999999999999999999999664 555555443
No 218
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=95.80 E-value=0.25 Score=48.24 Aligned_cols=107 Identities=17% Similarity=0.031 Sum_probs=84.3
Q ss_pred HHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHH
Q 012772 313 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 392 (456)
Q Consensus 313 ~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~ 392 (456)
..+.-+.+.|+|.+|.+++.++..-..+. .+...+++++-.-+.+|..++++.++..++.++..+...++ .||.+-
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~--dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~--~~p~i~ 179 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKL--DDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIY--CPPKVQ 179 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTS--SCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC--CCHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhcc--ccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCC--CCHHHH
Confidence 44556778999999999998887765442 23467888888889999999999999999999998877765 677555
Q ss_pred HHH-HHHHHHHH-HcCCHHHHHHHHHHHHHHHH
Q 012772 393 LQY-YTCGKLEW-FLGDTENAIKSMTEAVEILR 423 (456)
Q Consensus 393 ~~l-~~La~~~~-~~g~~~eA~~~l~~Al~i~~ 423 (456)
..+ ..-|.+++ ..++|.+|..+|-+|.+-+.
T Consensus 180 a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~ 212 (394)
T 3txn_A 180 GALDLQSGILHAADERDFKTAFSYFYEAFEGFD 212 (394)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhhHHHHHhccCHHHHHHHHHHHHhccc
Confidence 544 44467777 79999999999999875544
No 219
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.80 E-value=0.065 Score=60.22 Aligned_cols=109 Identities=14% Similarity=0.088 Sum_probs=67.0
Q ss_pred hhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH-----------------
Q 012772 318 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVY----------------- 380 (456)
Q Consensus 318 ~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~----------------- 380 (456)
+...|++++|++.|.++ .-...+..++..+.+.|+|++|+++++.+....
T Consensus 1115 ql~~G~~kEAIdsYiKA-------------dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~ 1181 (1630)
T 1xi4_A 1115 QLQKGMVKEAIDSYIKA-------------DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTN 1181 (1630)
T ss_pred HHhCCCHHHHHHHHHhc-------------CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhc
Confidence 34556666666655443 113445668888889999999999997655221
Q ss_pred -----HHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHhhh
Q 012772 381 -----QRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASYKL 451 (456)
Q Consensus 381 -----e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~e~~~~~ 451 (456)
+.... .+.. ..+.++|..+...|++++|..+|.+|- +......++..+.+.++.++..+
T Consensus 1182 rleele~fI~--~~n~-ad~~~iGd~le~eg~YeeA~~~Y~kA~---------ny~rLA~tLvkLge~q~AIEaar 1245 (1630)
T 1xi4_A 1182 RLAELEEFIN--GPNN-AHIQQVGDRCYDEKMYDAAKLLYNNVS---------NFGRLASTLVHLGEYQAAVDGAR 1245 (1630)
T ss_pred CHHHHHHHHh--CCCH-HHHHHHHHHHHhcCCHHHHHHHHHhhh---------HHHHHHHHHHHhCCHHHHHHHHH
Confidence 11111 1222 245568888889999999999999872 33344555555555555555443
No 220
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=95.72 E-value=0.0051 Score=51.79 Aligned_cols=39 Identities=13% Similarity=0.015 Sum_probs=34.0
Q ss_pred cccccCCCc---CCCeeEEeCCEEEEEEecCCCCCCcccCCh
Q 012772 219 ISIINHSCL---PNAVLVFEGRLAVVRAVQHVPKGAEGQFDD 257 (456)
Q Consensus 219 ~sl~NHSC~---PN~~~~f~~~~~~vra~~~I~~Gee~~~~~ 257 (456)
+.++||+|. +|+...-.++++.++|+|+|++|+|+.+.+
T Consensus 97 mr~vn~a~~~~eqNl~a~q~~~~I~~~~~r~I~pGeELlv~Y 138 (152)
T 3ihx_A 97 MMFVRPAQNHLEQNLVAYQYGHHVYYTTIKNVEPKQELKVWY 138 (152)
T ss_dssp GGGCCBCCSTTTCCEEEEECSSSEEEEESSCBCTTCBCCEEE
T ss_pred eeeeeccCCccCCCcEEEEeCCeEEEEEeeecCCCCEEEEec
Confidence 467999998 798887778999999999999999988543
No 221
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=95.60 E-value=0.1 Score=52.45 Aligned_cols=80 Identities=8% Similarity=-0.037 Sum_probs=46.9
Q ss_pred cCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHH
Q 012772 321 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME----LEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYY 396 (456)
Q Consensus 321 ~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~----~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~ 396 (456)
.+++++|+..|+++.+. . -..+...|+.+|.. .+++++|+++++++++. .+ ...++
T Consensus 128 ~~~~~~A~~~~~~a~~~-------~---~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~-------~~---~~a~~ 187 (490)
T 2xm6_A 128 KVDKAESVKWFRLAAEQ-------G---RDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ-------GN---VWSCN 187 (490)
T ss_dssp CCCHHHHHHHHHHHHHT-------T---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------TC---HHHHH
T ss_pred CCCHHHHHHHHHHHHHC-------C---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-------CC---HHHHH
Confidence 45556666555555321 1 13455566666665 55666666666666542 12 34566
Q ss_pred HHHHHHHH----cCCHHHHHHHHHHHHH
Q 012772 397 TCGKLEWF----LGDTENAIKSMTEAVE 420 (456)
Q Consensus 397 ~La~~~~~----~g~~~eA~~~l~~Al~ 420 (456)
.||.+|.. .+++++|.++|++|.+
T Consensus 188 ~Lg~~y~~g~g~~~~~~~A~~~~~~a~~ 215 (490)
T 2xm6_A 188 QLGYMYSRGLGVERNDAISAQWYRKSAT 215 (490)
T ss_dssp HHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence 67777766 6777777777777765
No 222
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.59 E-value=0.0086 Score=40.69 Aligned_cols=37 Identities=30% Similarity=0.733 Sum_probs=30.7
Q ss_pred CccCcCcCCCCCCccCcCCCCcccccHHhhhhcHHHhHHhchh
Q 012772 27 ISRCDGCFASSNLKKCSACQVVWYCGSNCQKLDWKLHRLECQV 69 (456)
Q Consensus 27 ~~~C~~C~~~~~~~~C~~C~~v~yCs~~C~~~~~~~H~~EC~~ 69 (456)
...|.-|.. ...+.|++|.. +|||-.|. +.|+..|.-
T Consensus 12 ~~~C~vC~~-~~kY~CPrC~~-~yCSl~C~----k~Hk~~C~~ 48 (56)
T 2yqq_A 12 TVVCVICLE-KPKYRCPACRV-PYCSVVCF----RKHKEQCNP 48 (56)
T ss_dssp CCCCTTTCS-CCSEECTTTCC-EESSHHHH----HHHHHHCCC
T ss_pred CCccCcCcC-CCeeeCCCCCC-CeeCHHHH----HHHHhhCcC
Confidence 347999998 78899999998 89999997 477776764
No 223
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=95.48 E-value=0.12 Score=52.38 Aligned_cols=54 Identities=13% Similarity=0.022 Sum_probs=37.4
Q ss_pred hhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 012772 318 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIP 378 (456)
Q Consensus 318 ~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~ 378 (456)
+...|++++|+++|++++.+ .|.++ ..++..++.++..+|++++|++.+++++.
T Consensus 331 ~~~~g~~~~A~~~~~~al~~-----~p~~~--~~~~~~~~~~~~~~~~~~~A~~~~~~Al~ 384 (530)
T 2ooe_A 331 EESRMKYEKVHSIYNRLLAI-----EDIDP--TLVYIQYMKFARRAEGIKSGRMIFKKARE 384 (530)
T ss_dssp HHHTTCHHHHHHHHHHHHHS-----SSSCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhcCCHHHHHHHHHHHhCc-----cccCc--hHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 44678889998888888752 44443 23566677777777777777777777764
No 224
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=95.44 E-value=0.13 Score=51.56 Aligned_cols=79 Identities=10% Similarity=-0.016 Sum_probs=41.2
Q ss_pred cCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHH----ccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHH
Q 012772 321 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME----LEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYY 396 (456)
Q Consensus 321 ~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~----~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~ 396 (456)
.+++++|+..++++.+. .+ ..+...|+.+|.. .+++++|+++++++... .+ ...++
T Consensus 56 ~~~~~~A~~~~~~a~~~-------~~---~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~-------~~---~~a~~ 115 (490)
T 2xm6_A 56 TKDLTQAMDWFRRAAEQ-------GY---TPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK-------GL---PQAQQ 115 (490)
T ss_dssp CCCHHHHHHHHHHHHHT-------TC---HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------TC---HHHHH
T ss_pred CcCHHHHHHHHHHHHHC-------CC---HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-------CC---HHHHH
Confidence 56667777666666431 11 3445556666665 56666666666655431 12 12344
Q ss_pred HHHHHHHH----cCCHHHHHHHHHHHH
Q 012772 397 TCGKLEWF----LGDTENAIKSMTEAV 419 (456)
Q Consensus 397 ~La~~~~~----~g~~~eA~~~l~~Al 419 (456)
.||.+|.. .+++++|+.+|++|.
T Consensus 116 ~Lg~~y~~g~g~~~~~~~A~~~~~~a~ 142 (490)
T 2xm6_A 116 NLGVMYHEGNGVKVDKAESVKWFRLAA 142 (490)
T ss_dssp HHHHHHHHTSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence 45555544 445555555555543
No 225
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=95.36 E-value=0.068 Score=54.35 Aligned_cols=86 Identities=12% Similarity=0.052 Sum_probs=62.1
Q ss_pred cCChH-------HHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 012772 321 CGNHQ-------EVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 393 (456)
Q Consensus 321 ~g~~~-------~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~ 393 (456)
.|+++ +|+..+++++. .+.|. -..++..++.++...|++++|...+++++.+ ++.++. .
T Consensus 292 ~g~~~~a~~~~~~A~~~~~~Al~----~~~p~---~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~-----~p~~~~--~ 357 (530)
T 2ooe_A 292 KGDMNNAKLFSDEAANIYERAIS----TLLKK---NMLLYFAYADYEESRMKYEKVHSIYNRLLAI-----EDIDPT--L 357 (530)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTT----TTCSS---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS-----SSSCHH--H
T ss_pred ccchhhhhhhhHHHHHHHHHHHH----HhCcc---cHHHHHHHHHHHHhcCCHHHHHHHHHHHhCc-----cccCch--H
Confidence 68877 77777776653 12233 3567788899999999999999999999863 444442 4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 012772 394 QYYTCGKLEWFLGDTENAIKSMTEAVE 420 (456)
Q Consensus 394 ~l~~La~~~~~~g~~~eA~~~l~~Al~ 420 (456)
.+..+|.++..+|++++|++.|++|++
T Consensus 358 ~~~~~~~~~~~~~~~~~A~~~~~~Al~ 384 (530)
T 2ooe_A 358 VYIQYMKFARRAEGIKSGRMIFKKARE 384 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 666777777777777777777777765
No 226
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.30 E-value=0.2 Score=38.02 Aligned_cols=65 Identities=11% Similarity=-0.102 Sum_probs=51.0
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 012772 324 HQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKL 401 (456)
Q Consensus 324 ~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~ 401 (456)
.++|..++++++.+ +|.-.+++..++..+...|+|++|+.+.++++. ..|+ .|.+...-..+..+
T Consensus 25 ~~~A~~~l~~AL~~--------dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~----~~p~-~~~~~~i~~~I~~A 89 (93)
T 3bee_A 25 TDEVSLLLEQALQL--------EPYNEAALSLIANDHFISFRFQEAIDTWVLLLD----SNDP-NLDRVTIIESINKA 89 (93)
T ss_dssp CHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT----CCCT-TCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH--------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh----hCCC-CccHHHHHHHHHHH
Confidence 68999999998864 334467778899999999999999999999875 3555 77776666666554
No 227
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=95.14 E-value=0.032 Score=47.18 Aligned_cols=48 Identities=8% Similarity=0.063 Sum_probs=37.5
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHcc-----------CHHHHHHHHHHHHHH
Q 012772 324 HQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELE-----------DWKEALAYCQLTIPV 379 (456)
Q Consensus 324 ~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g-----------~~~~A~~~~~~~l~~ 379 (456)
+++|+..|++++++ +|....++.+++.+|..+| +|++|++++++++++
T Consensus 62 ~~eAi~~le~AL~l--------dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l 120 (158)
T 1zu2_A 62 IQEAITKFEEALLI--------DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDE 120 (158)
T ss_dssp HHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh--------CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHh
Confidence 45777777777654 3445678889999999875 899999999999875
No 228
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=95.11 E-value=0.0067 Score=41.48 Aligned_cols=36 Identities=28% Similarity=0.696 Sum_probs=29.6
Q ss_pred CccCcCcCC---CCCCccCcCCCCcccccHHhhhhcHHHhHHhch
Q 012772 27 ISRCDGCFA---SSNLKKCSACQVVWYCGSNCQKLDWKLHRLECQ 68 (456)
Q Consensus 27 ~~~C~~C~~---~~~~~~C~~C~~v~yCs~~C~~~~~~~H~~EC~ 68 (456)
...|.-|.. ....+.||+|.. +|||-.|.+ .|+ +|.
T Consensus 11 ~~~C~vC~~~~~~~akY~CPrC~~-rYCSl~C~k----~Hk-~Cs 49 (59)
T 1x4s_A 11 AGPCGFCPAGEVQPARYTCPRCNA-PYCSLRCYR----THG-TCA 49 (59)
T ss_dssp CEEECSSCTTCCEEECEECTTTCC-EESSHHHHH----HHC-CGG
T ss_pred CCcCcCCCCCcCCCccccCcCCCC-CccChHHHH----HHh-HhC
Confidence 468999986 356899999998 799999985 677 785
No 229
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=95.09 E-value=0.084 Score=43.20 Aligned_cols=76 Identities=12% Similarity=0.030 Sum_probs=60.1
Q ss_pred ChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 012772 323 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLE 402 (456)
Q Consensus 323 ~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~ 402 (456)
++++|++.|+++.+. + ++.-. |+.+|...+.+++|+++++++.+. .| ...+++||.+|
T Consensus 10 d~~~A~~~~~~aa~~-----g--~~~a~-----lg~~y~~g~~~~~A~~~~~~Aa~~-------g~---~~a~~~Lg~~y 67 (138)
T 1klx_A 10 DLKKAIQYYVKACEL-----N--EMFGC-----LSLVSNSQINKQKLFQYLSKACEL-------NS---GNGCRFLGDFY 67 (138)
T ss_dssp HHHHHHHHHHHHHHT-----T--CTTHH-----HHHHTCTTSCHHHHHHHHHHHHHT-------TC---HHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcC-----C--CHhhh-----HHHHHHcCCCHHHHHHHHHHHHcC-------CC---HHHHHHHHHHH
Confidence 567888888877542 2 22222 888888888999999999998764 33 46789999999
Q ss_pred HH----cCCHHHHHHHHHHHHH
Q 012772 403 WF----LGDTENAIKSMTEAVE 420 (456)
Q Consensus 403 ~~----~g~~~eA~~~l~~Al~ 420 (456)
.. .+++++|.++|++|.+
T Consensus 68 ~~G~g~~~d~~~A~~~~~~Aa~ 89 (138)
T 1klx_A 68 ENGKYVKKDLRKAAQYYSKACG 89 (138)
T ss_dssp HHCSSSCCCHHHHHHHHHHHHH
T ss_pred HcCCCCCccHHHHHHHHHHHHc
Confidence 98 8999999999999976
No 230
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=95.07 E-value=0.4 Score=45.16 Aligned_cols=111 Identities=11% Similarity=0.031 Sum_probs=71.5
Q ss_pred ChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCC--ChHHHHHHHHHHH
Q 012772 323 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF--HPLLGLQYYTCGK 400 (456)
Q Consensus 323 ~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~--hp~~~~~l~~La~ 400 (456)
++++|..+|+++.. .+ |+ ......+ ..++..+|+|++|....++++..+-.+-..+ .|.-+..+.++..
T Consensus 193 ~~q~A~~~f~El~~----~~-p~-~~~~~lL---ln~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~ 263 (310)
T 3mv2_B 193 TATSNFYYYEELSQ----TF-PT-WKTQLGL---LNLHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQIT 263 (310)
T ss_dssp TTTHHHHHHHHHHT----TS-CS-HHHHHHH---HHHHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH----hC-CC-cccHHHH---HHHHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHH
Confidence 88999888887642 12 22 0111222 2279999999999999987766542211110 1333555777777
Q ss_pred HHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHh
Q 012772 401 LEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASY 449 (456)
Q Consensus 401 ~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~e~~~ 449 (456)
+...+|+ +|.+++.++++ .-|+||.+.+...+=+....-+..
T Consensus 264 l~~~lgk--~a~~l~~qL~~-----~~P~hp~i~d~~~k~~~Fd~~~~k 305 (310)
T 3mv2_B 264 LALMQGL--DTEDLTNQLVK-----LDHEHAFIKHHQEIDAKFDELVRK 305 (310)
T ss_dssp HHHHTTC--TTHHHHHHHHH-----TTCCCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhCh--HHHHHHHHHHH-----hCCCChHHHHHHHHHHHHHHHHHH
Confidence 7778887 78888887765 458999999888775555443333
No 231
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.95 E-value=0.076 Score=59.68 Aligned_cols=95 Identities=9% Similarity=-0.020 Sum_probs=69.3
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH--------
Q 012772 311 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQR-------- 382 (456)
Q Consensus 311 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~-------- 382 (456)
....|..+.+.|+|++|...|.++ ..+..++..|.++|++++|++.++++....-+
T Consensus 1198 ~~~iGd~le~eg~YeeA~~~Y~kA----------------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acv 1261 (1630)
T 1xi4_A 1198 IQQVGDRCYDEKMYDAAKLLYNNV----------------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACV 1261 (1630)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHhh----------------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 345666777888999888888764 35678899999999999999999888654221
Q ss_pred ---------hcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 383 ---------VYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 383 ---------~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
..|-.-..-+..+.+++..|...|.+++|+.++++|+.+
T Consensus 1262 e~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~L 1309 (1630)
T 1xi4_A 1262 DGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGL 1309 (1630)
T ss_pred hhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhcc
Confidence 112111122335668888899999999999999999654
No 232
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=94.89 E-value=0.041 Score=54.64 Aligned_cols=83 Identities=14% Similarity=0.027 Sum_probs=56.5
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 012772 314 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 393 (456)
Q Consensus 314 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~ 393 (456)
.|..+...|++++|++.++++. + ..++..+..++...|+|+.|...+..+ ..||.-
T Consensus 154 LA~~L~~Lg~yq~AVea~~KA~----------~---~~~Wk~v~~aCv~~~ef~lA~~~~l~L---------~~~ad~-- 209 (449)
T 1b89_A 154 LASTLVHLGEYQAAVDGARKAN----------S---TRTWKEVCFACVDGKEFRLAQMCGLHI---------VVHADE-- 209 (449)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHT----------C---HHHHHHHHHHHHHTTCHHHHHHTTTTT---------TTCHHH--
T ss_pred HHHHHHHhccHHHHHHHHHHcC----------C---chhHHHHHHHHHHcCcHHHHHHHHHHH---------HhCHhh--
Confidence 4555666777777777666551 1 345566677777777777775554431 145554
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 394 QYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 394 ~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
+..+..+|...|++++|..+|++|+.+
T Consensus 210 -l~~lv~~Yek~G~~eEai~lLe~aL~l 236 (449)
T 1b89_A 210 -LEELINYYQDRGYFEELITMLEAALGL 236 (449)
T ss_dssp -HHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred -HHHHHHHHHHCCCHHHHHHHHHHHhCC
Confidence 446888899999999999999998743
No 233
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=94.84 E-value=0.017 Score=51.82 Aligned_cols=39 Identities=13% Similarity=-0.020 Sum_probs=33.6
Q ss_pred cccccCCCc---CCCeeEEeCCEEEEEEecCCCCCCcccCCh
Q 012772 219 ISIINHSCL---PNAVLVFEGRLAVVRAVQHVPKGAEGQFDD 257 (456)
Q Consensus 219 ~sl~NHSC~---PN~~~~f~~~~~~vra~~~I~~Gee~~~~~ 257 (456)
+.++||+|. +|+...-.++++.++|+|+|.+|+|+.+.+
T Consensus 141 mRfVn~Ar~~~EqNL~A~q~~~~Iyy~a~RdI~pGeELlVwY 182 (237)
T 3ray_A 141 MRYVVISREEREQNLLAFQHSERIYFRACRDIRPGEWLRVWY 182 (237)
T ss_dssp GGGCEECCCTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEE
T ss_pred eeEEEcCCCcccccceeEEeCCEEEEEEccccCCCCEEEEee
Confidence 468999996 688887778999999999999999988554
No 234
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=94.77 E-value=0.44 Score=42.38 Aligned_cols=97 Identities=9% Similarity=-0.036 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHH-----ccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Q 012772 328 VSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME-----LEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLE 402 (456)
Q Consensus 328 ~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~-----~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~ 402 (456)
..++..++.+..+.|-|..-.-+-.+..-|..|.. .|+-+.|.+.|+.+.++.+.-+||.||.+.....+.+..|
T Consensus 98 ~~iC~dil~lld~~Lip~aEskVFY~KMKGDYyRYlAE~~~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFy 177 (227)
T 2o8p_A 98 KAFLQSFEDCVDRLVEKSFFSKFFKLKVKSDISRYKLEFGLCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYIL 177 (227)
T ss_dssp HHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHhccCcHHHHHHHHHHhhhHHHHHHHHccccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHH
Confidence 34556666666666666541111111222233332 4678899999999999999889999999988888888887
Q ss_pred HH-cCCHHHHHHHHHHHHHHHHH
Q 012772 403 WF-LGDTENAIKSMTEAVEILRI 424 (456)
Q Consensus 403 ~~-~g~~~eA~~~l~~Al~i~~~ 424 (456)
.. +++.++|..+.++|.++.+.
T Consensus 178 YEIln~p~~Ac~lAk~Afd~~~~ 200 (227)
T 2o8p_A 178 SEKYGEKKQVFNMLNSLGKILEL 200 (227)
T ss_dssp HHTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHHHHHHH
Confidence 76 68899999999999997643
No 235
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=94.51 E-value=0.2 Score=46.62 Aligned_cols=86 Identities=12% Similarity=-0.046 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHc-----cCHHHHHHHHHHHHHHHHHhcCCCChHH-HHHHHHH
Q 012772 325 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL-----EDWKEALAYCQLTIPVYQRVYPQFHPLL-GLQYYTC 398 (456)
Q Consensus 325 ~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~-----g~~~~A~~~~~~~l~~~e~~~g~~hp~~-~~~l~~L 398 (456)
.+|..++++++++-. +..-..++..|+.+|... |+.++|.++++++|.+ +|.- ....+..
T Consensus 180 ~~A~a~lerAleLDP------~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~L--------nP~~~id~~v~Y 245 (301)
T 3u64_A 180 HAAVMMLERACDLWP------SYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRY--------CSAHDPDHHITY 245 (301)
T ss_dssp HHHHHHHHHHHHHCT------THHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHH--------CCTTCSHHHHHH
T ss_pred HHHHHHHHHHHHhCC------CcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHh--------CCCCCchHHHHH
Confidence 556666666665522 222466888999999985 9999999999999974 3332 4567777
Q ss_pred HHHHHH-cCCHHHHHHHHHHHHHHHHH
Q 012772 399 GKLEWF-LGDTENAIKSMTEAVEILRI 424 (456)
Q Consensus 399 a~~~~~-~g~~~eA~~~l~~Al~i~~~ 424 (456)
|..+.. +|++++|..+|++|+++=-.
T Consensus 246 A~~l~~~~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 246 ADALCIPLNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHTTTTTTCHHHHHHHHHHHHHCCGG
T ss_pred HHHHHHhcCCHHHHHHHHHHHHcCCCC
Confidence 888877 59999999999999885433
No 236
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=94.23 E-value=0.47 Score=40.05 Aligned_cols=99 Identities=13% Similarity=0.035 Sum_probs=69.7
Q ss_pred HHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCCh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCC----
Q 012772 355 KLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP-LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTN---- 429 (456)
Q Consensus 355 ~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp-~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~---- 429 (456)
.-+..+.+.|.|+.|+-.+..++.+.+.--....| ..+..+..+|.+++..|+|..|..+|++|+...+...-..
T Consensus 25 dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~ 104 (167)
T 3ffl_A 25 DHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRP 104 (167)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 34455677899999999999988876531112234 3455888999999999999999999999999888542111
Q ss_pred -------------CchHHHHHHHHHHHHHHHHhhhcc
Q 012772 430 -------------SPFMKELILKLEEAQAEASYKLSS 453 (456)
Q Consensus 430 -------------h~~~~~~~~~l~~~~~e~~~~~~~ 453 (456)
-+.-.++..+++.|..++...+.|
T Consensus 105 ~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~A 141 (167)
T 3ffl_A 105 STGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDA 141 (167)
T ss_dssp ------------CCCCHHHHHHHHHHHHHHTTCHHHH
T ss_pred cccccCCCcccccccchHHHHHHHHHHHHHHCCHHHH
Confidence 112246778888888776655443
No 237
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=93.68 E-value=0.23 Score=49.51 Aligned_cols=57 Identities=23% Similarity=0.207 Sum_probs=29.1
Q ss_pred HHHHHHHH-H--HHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcC-----CHHHHHHHHHHHH
Q 012772 352 TREKLIKI-L--MELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLG-----DTENAIKSMTEAV 419 (456)
Q Consensus 352 ~~~~L~~~-~--~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g-----~~~eA~~~l~~Al 419 (456)
+..+|+.+ | ...|++++|+++++++.+. . ....+++||.+|. .| ++++|+.+|++|.
T Consensus 250 a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~-------g---~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa 314 (452)
T 3e4b_A 250 SWVSLAQLLYDFPELGDVEQMMKYLDNGRAA-------D---QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV 314 (452)
T ss_dssp HHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT-------T---CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC-------C---CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh
Confidence 34455554 2 2345555555555554421 1 2335556666655 44 5666666666555
No 238
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=93.41 E-value=0.044 Score=54.42 Aligned_cols=54 Identities=9% Similarity=0.029 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 352 TREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 352 ~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
++.++|..+...|+|++|..++.++ ..+..||.++.++|++++|++.+++|..+
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a----------------~n~~~LA~~L~~Lg~yq~AVea~~KA~~~ 177 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV----------------SNFGRLASTLVHLGEYQAAVDGARKANST 177 (449)
T ss_dssp -------------CTTTHHHHHHHT----------------TCHHHHHHHHHTTTCHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh----------------hhHHHHHHHHHHhccHHHHHHHHHHcCCc
Confidence 7889999999999999999999876 47889999999999999999999999544
No 239
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=93.24 E-value=0.66 Score=45.94 Aligned_cols=101 Identities=6% Similarity=-0.116 Sum_probs=76.8
Q ss_pred HHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHH
Q 012772 312 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 391 (456)
Q Consensus 312 ~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~ 391 (456)
.+.|.-+.+.|++++|.+.|.++.... .++ ...+++.-.++.++...++|..+..+..++..... ...+|.+
T Consensus 135 ~~la~~~~~~Gd~~~A~~~~~~~~~~~---~~~--~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~---~~~d~~~ 206 (429)
T 4b4t_R 135 INLGEYYAQIGDKDNAEKTLGKSLSKA---IST--GAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIE---KGGDWER 206 (429)
T ss_dssp HHHHHHHHHHCCCTTHHHHHHHHHHHH---TCC--CSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT---TCCCTHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhc---CCh--HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhh---cCCCHHH
Confidence 456666778899999999999886543 233 45678888999999999999999999999876544 3445544
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 012772 392 -GLQYYTCGKLEWFLGDTENAIKSMTEAVE 420 (456)
Q Consensus 392 -~~~l~~La~~~~~~g~~~eA~~~l~~Al~ 420 (456)
+....--|.+++..++|.+|.++|.++..
T Consensus 207 ~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~ 236 (429)
T 4b4t_R 207 RNRYKTYYGIHCLAVRNFKEAAKLLVDSLA 236 (429)
T ss_dssp HHHHHHHHHHGGGGTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhChHHHHHHHHHHHhc
Confidence 34444557778889999999999987654
No 240
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=93.20 E-value=0.85 Score=37.87 Aligned_cols=87 Identities=11% Similarity=0.157 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Q 012772 325 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF 404 (456)
Q Consensus 325 ~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~ 404 (456)
++.++.|+++.......-+......+.+.-..|. +...++.++|.+.++.++.+ |...|..+...|+.-..
T Consensus 36 ~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~-~~ei~D~d~aR~vy~~a~~~--------hKkFAKiwi~~AqFEiR 106 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKYGQNESFARIQVRFAE-LKAIQEPDDARDYFQMARAN--------CKKFAFVHISFAQFELS 106 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHH-HHHHHCGGGCHHHHHHHHHH--------CTTBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCccccccHHHHHHHHHHHHH-HHHhcCHHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHH
Confidence 6667777777643211101122223333333332 24568999999999999885 44447777778888888
Q ss_pred cCCHHHHHHHHHHHHH
Q 012772 405 LGDTENAIKSMTEAVE 420 (456)
Q Consensus 405 ~g~~~eA~~~l~~Al~ 420 (456)
+|+...|.+.|.+|+.
T Consensus 107 qgnl~kARkILg~AiG 122 (161)
T 4h7y_A 107 QGNVKKSKQLLQKAVE 122 (161)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHhc
Confidence 9999999999999998
No 241
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=93.20 E-value=0.22 Score=48.07 Aligned_cols=66 Identities=17% Similarity=0.036 Sum_probs=53.9
Q ss_pred ccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 347 VNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 347 ~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
+....++..++.++...|++++|+.++++++.+- |. ...+..+|+++...|++++|.+.|.+|+.+
T Consensus 274 ~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln--------~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL 339 (372)
T 3ly7_A 274 NNLSIIYQIKAVSALVKGKTDESYQAINTGIDLE--------MS-WLNYVLLGKVYEMKGMNREAADAYLTAFNL 339 (372)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--------CC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC--------CC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 3344555667777777899999999999999862 22 456788999999999999999999999986
No 242
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=93.15 E-value=1.2 Score=35.86 Aligned_cols=86 Identities=13% Similarity=0.042 Sum_probs=61.3
Q ss_pred cHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCCh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhc
Q 012772 348 NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP-LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITH 426 (456)
Q Consensus 348 ~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp-~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~ 426 (456)
...++..++|.++.....-.. -++.+.+.+.++...+| ..-..+|.||..+.++|+|++|+.+.+..+++
T Consensus 33 ~s~~~~F~yAw~Lv~S~~~~d----~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~----- 103 (126)
T 1nzn_A 33 VSKSTQFEYAWCLVRTRYNDD----IRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT----- 103 (126)
T ss_dssp CCHHHHHHHHHHHTTSSSHHH----HHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----
T ss_pred CcHHHHHHHHHHHHcCCCHHH----HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh-----
Confidence 556888889998888655322 23344455556665667 56679999999999999999999999888774
Q ss_pred CCCCchHHHHHHHHHH
Q 012772 427 GTNSPFMKELILKLEE 442 (456)
Q Consensus 427 G~~h~~~~~~~~~l~~ 442 (456)
-|+++....+...+.+
T Consensus 104 eP~n~QA~~Lk~~i~~ 119 (126)
T 1nzn_A 104 EPQNNQAKELERLIDK 119 (126)
T ss_dssp CTTCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 4566666655554443
No 243
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=92.83 E-value=0.42 Score=39.87 Aligned_cols=71 Identities=10% Similarity=-0.026 Sum_probs=51.3
Q ss_pred HHHHHHHHhhhhcC---ChHHHHHHHHHHHHHHHhhcCCCCc-cHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhc
Q 012772 309 NILSKKTLALTSCG---NHQEVVSTYKMIEKLQKKLYHPFSV-NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVY 384 (456)
Q Consensus 309 ~~l~~~a~~~~~~g---~~~~a~~~~~~~~~~~~~~l~p~h~-~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~ 384 (456)
++.+.-|..+..+. +.++++.+++.+++. ++| ..-+.++.|+..|.++|+|++|+++++++|++
T Consensus 33 ~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~-------~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~i----- 100 (152)
T 1pc2_A 33 STQFEYAWCLVRSKYNDDIRKGIVLLEELLPK-------GSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT----- 100 (152)
T ss_dssp HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHH-------SCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-------CCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhc-----
Confidence 34455666666665 556777777776643 123 35678899999999999999999999999864
Q ss_pred CCCChHH
Q 012772 385 PQFHPLL 391 (456)
Q Consensus 385 g~~hp~~ 391 (456)
-|+|+.-
T Consensus 101 eP~n~QA 107 (152)
T 1pc2_A 101 EPQNNQA 107 (152)
T ss_dssp CTTCHHH
T ss_pred CCCCHHH
Confidence 2456553
No 244
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=92.63 E-value=0.47 Score=47.16 Aligned_cols=80 Identities=14% Similarity=0.027 Sum_probs=55.6
Q ss_pred hhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHcc-----CHHHHHHHHHHHHHHHHHhcCCCChHHHH
Q 012772 319 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELE-----DWKEALAYCQLTIPVYQRVYPQFHPLLGL 393 (456)
Q Consensus 319 ~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g-----~~~~A~~~~~~~l~~~e~~~g~~hp~~~~ 393 (456)
...+++++|++.|+++.+. + ...+..+|+.+|. .| ++++|+.+++++. +.+ ..
T Consensus 262 ~~~~d~~~A~~~~~~Aa~~-----g-----~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa--------~g~---~~ 319 (452)
T 3e4b_A 262 PELGDVEQMMKYLDNGRAA-----D-----QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV--------GRE---VA 319 (452)
T ss_dssp GGGCCHHHHHHHHHHHHHT-----T-----CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT--------TTC---HH
T ss_pred CCCCCHHHHHHHHHHHHHC-----C-----CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh--------CCC---HH
Confidence 3578889998888887532 1 2456778888887 44 8888888887764 233 35
Q ss_pred HHHHHHHHHHH----cCCHHHHHHHHHHHHH
Q 012772 394 QYYTCGKLEWF----LGDTENAIKSMTEAVE 420 (456)
Q Consensus 394 ~l~~La~~~~~----~g~~~eA~~~l~~Al~ 420 (456)
.+++||.+|.. ..++++|..+|++|.+
T Consensus 320 A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~ 350 (452)
T 3e4b_A 320 ADYYLGQIYRRGYLGKVYPQKALDHLLTAAR 350 (452)
T ss_dssp HHHHHHHHHHTTTTSSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCCCcCHHHHHHHHHHHHh
Confidence 67777877765 2377778888877764
No 245
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=92.50 E-value=6.7 Score=38.10 Aligned_cols=81 Identities=17% Similarity=0.097 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCc
Q 012772 352 TREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSP 431 (456)
Q Consensus 352 ~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~ 431 (456)
+-..|+.+|...|+|.+|++.+.+++.-.++.- +-..+.-.+..-.++|..+|++.++..+|.+|..+....+ .||
T Consensus 101 l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~d--d~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~--~~p 176 (394)
T 3txn_A 101 LEARLIALYFDTALYTEALALGAQLLRELKKLD--DKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIY--CPP 176 (394)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSS--CTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC--CCH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccc--cchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCC--CCH
Confidence 445899999999999999999999988776642 2344444555668889999999999999999999988765 677
Q ss_pred hHHHH
Q 012772 432 FMKEL 436 (456)
Q Consensus 432 ~~~~~ 436 (456)
.+...
T Consensus 177 ~i~a~ 181 (394)
T 3txn_A 177 KVQGA 181 (394)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 246
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=92.24 E-value=2.9 Score=41.49 Aligned_cols=104 Identities=11% Similarity=0.009 Sum_probs=76.3
Q ss_pred HhhhhcCChHHHHHHHHHHHHHHHhhcCCC-CccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHH-HH
Q 012772 316 LALTSCGNHQEVVSTYKMIEKLQKKLYHPF-SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL-GL 393 (456)
Q Consensus 316 ~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~-h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~-~~ 393 (456)
.-+.++|++.+|.+++..+.. ...+.. ....++.+...+.+|...++|.+|..+..++..-.... +.+|.+ +.
T Consensus 145 ~i~e~~g~~~eA~~iL~~l~~---Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~--~~~~~lk~~ 219 (445)
T 4b4t_P 145 EIKKEEGKIDEAADILCELQV---ETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKN--PKYESLKLE 219 (445)
T ss_dssp HHHHHHTCHHHHHHHHHHHHH---HHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS--SCCHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHH---HHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhccc--CCcHHHHHH
Confidence 335567999999998777652 334433 33467777888899999999999999998875433222 445554 55
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q 012772 394 QYYTCGKLEWFLGDTENAIKSMTEAVEILRI 424 (456)
Q Consensus 394 ~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~ 424 (456)
.+.-.|.++.+.++|.+|-.+|.++.+....
T Consensus 220 ~~~~~~~~~~~e~~y~~a~~~y~e~~~~~~~ 250 (445)
T 4b4t_P 220 YYNLLVKISLHKREYLEVAQYLQEIYQTDAI 250 (445)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHhcccc
Confidence 6666788999999999999999988776544
No 247
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=91.45 E-value=2.1 Score=43.28 Aligned_cols=89 Identities=8% Similarity=0.008 Sum_probs=67.8
Q ss_pred hhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 012772 318 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYT 397 (456)
Q Consensus 318 ~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~ 397 (456)
+...|++++|.+++++..+ .-+.| -..+++.|+..|.+.|++++|.+++.++... +..|. ..++..
T Consensus 115 ~~~~g~~~~A~~l~~~M~~---~g~~P----d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~------G~~Pd-~~ty~~ 180 (501)
T 4g26_A 115 AVAKDDPEMAFDMVKQMKA---FGIQP----RLRSYGPALFGFCRKGDADKAYEVDAHMVES------EVVPE-EPELAA 180 (501)
T ss_dssp HHHHTCHHHHHHHHHHHHH---TTCCC----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT------TCCCC-HHHHHH
T ss_pred HHhcCCHHHHHHHHHHHHH---cCCCC----ccceehHHHHHHHHCCCHHHHHHHHHHHHhc------CCCCC-HHHHHH
Confidence 4456899999999887753 22333 2567888999999999999999999887631 33343 357788
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHH
Q 012772 398 CGKLEWFLGDTENAIKSMTEAVE 420 (456)
Q Consensus 398 La~~~~~~g~~~eA~~~l~~Al~ 420 (456)
|-..+...|+.++|.++|++-.+
T Consensus 181 Li~~~~~~g~~d~A~~ll~~Mr~ 203 (501)
T 4g26_A 181 LLKVSMDTKNADKVYKTLQRLRD 203 (501)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCHHHHHHHHHHHHH
Confidence 88889999999999999987543
No 248
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=91.44 E-value=0.55 Score=44.22 Aligned_cols=55 Identities=9% Similarity=-0.073 Sum_probs=41.6
Q ss_pred hhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 012772 317 ALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTI 377 (456)
Q Consensus 317 ~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l 377 (456)
.+...|++++|++.+++.+. .+| +...+.++..++.++..+|+.+.|.+..+++.
T Consensus 109 i~~~~g~~eeAL~~l~~~i~-----~~~-~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~ 163 (310)
T 3mv2_B 109 AQAILGDLDKSLETCVEGID-----NDE-AEGTTELLLLAIEVALLNNNVSTASTIFDNYT 163 (310)
T ss_dssp HHHHHTCHHHHHHHHHHHHT-----SSC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHhc-----cCC-CcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 34456999999988776532 122 25678888899999999999999999987654
No 249
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=91.07 E-value=2.1 Score=38.55 Aligned_cols=78 Identities=12% Similarity=-0.005 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH---hcCCCCchHHHHHHHHH
Q 012772 366 WKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF-LGDTENAIKSMTEAVEILRI---THGTNSPFMKELILKLE 441 (456)
Q Consensus 366 ~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~-~g~~~eA~~~l~~Al~i~~~---~~G~~h~~~~~~~~~l~ 441 (456)
-+.|.+.|+++..+.+.-+||.||.+.....+.+..|.. +++.++|..+.++|.+--.. +++.++ +.+...-|.
T Consensus 147 ~~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~eld~l~ees--ykDstlImq 224 (248)
T 3uzd_A 147 VESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDS--YKDSTLIMQ 224 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTT--HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhcCCccc--hHHHHHHHH
Confidence 357888899999999889999999999999999888877 68999999888887664333 234443 344434444
Q ss_pred HHHH
Q 012772 442 EAQA 445 (456)
Q Consensus 442 ~~~~ 445 (456)
.++.
T Consensus 225 LLRD 228 (248)
T 3uzd_A 225 LLRD 228 (248)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 250
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=90.35 E-value=6.5 Score=35.69 Aligned_cols=55 Identities=11% Similarity=0.063 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Q 012772 367 KEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF-LGDTENAIKSMTEAVEI 421 (456)
Q Consensus 367 ~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~-~g~~~eA~~~l~~Al~i 421 (456)
+.|.+.|+++..+.+.-+||.||.+.....+.+..|.. +++.++|..+.++|.+-
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~ 207 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 47888899999999888999999999988888888877 68988888877766543
No 251
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=89.80 E-value=11 Score=33.75 Aligned_cols=58 Identities=12% Similarity=0.070 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Q 012772 367 KEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF-LGDTENAIKSMTEAVEILRI 424 (456)
Q Consensus 367 ~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~-~g~~~eA~~~l~~Al~i~~~ 424 (456)
+.|.+.|++++++.+.-+||.||.+.....+.+..|.. +++.++|..+.++|.+--..
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~ 205 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIA 205 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 57888999999999888999999999988888888776 79999999888887764333
No 252
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=88.97 E-value=4 Score=41.82 Aligned_cols=87 Identities=15% Similarity=0.049 Sum_probs=59.6
Q ss_pred hcCCh-HHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccC----------HHHHHHHHHHHHHHHHHhcCCCC
Q 012772 320 SCGNH-QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELED----------WKEALAYCQLTIPVYQRVYPQFH 388 (456)
Q Consensus 320 ~~g~~-~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~----------~~~A~~~~~~~l~~~e~~~g~~h 388 (456)
..|++ ++|++.+.+++.+ .|.|+ .+++.-+.++..+|+ +++|++++.+++. .+
T Consensus 40 ~~~~~~eeal~~~~~~l~~-----nP~~~---taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~--------~~ 103 (567)
T 1dce_A 40 QAGELDESVLELTSQILGA-----NPDFA---TLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLR--------VN 103 (567)
T ss_dssp HTTCCSHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHH--------HC
T ss_pred HcCCCCHHHHHHHHHHHHH-----CchhH---HHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHH--------hC
Confidence 34544 5778888888753 35554 444555555666666 8999999888875 34
Q ss_pred hHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHH
Q 012772 389 PLLGLQYYTCGKLEWFLG--DTENAIKSMTEAVEIL 422 (456)
Q Consensus 389 p~~~~~l~~La~~~~~~g--~~~eA~~~l~~Al~i~ 422 (456)
|.-...++.-+-++...| +++++++.+.+|+++-
T Consensus 104 pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d 139 (567)
T 1dce_A 104 PKSYGTWHHRCWLLSRLPEPNWARELELCARFLEAD 139 (567)
T ss_dssp TTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhc
Confidence 444555666677777778 6689999998888863
No 253
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=88.97 E-value=6 Score=35.94 Aligned_cols=95 Identities=13% Similarity=0.100 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHhhcCCCCccHHHHH--HHHHHHHHHc-----c-----CHHHHHHHHHHHHHHHHHhc--CCCChHHH
Q 012772 327 VVSTYKMIEKLQKKLYHPFSVNLMQTR--EKLIKILMEL-----E-----DWKEALAYCQLTIPVYQRVY--PQFHPLLG 392 (456)
Q Consensus 327 a~~~~~~~~~~~~~~l~p~h~~~~~~~--~~L~~~~~~~-----g-----~~~~A~~~~~~~l~~~e~~~--g~~hp~~~ 392 (456)
...++..++.+..+.|-|....-..+. ..-|..|..+ | --+.|.+.|+++.++.+.-+ ||.||.+.
T Consensus 117 L~~iC~diL~llD~~Lip~a~~~skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~eiA~~~L~~~pThPiRL 196 (268)
T 3efz_A 117 ILLESEDVIRIIDDNLLMYSEEGARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQRERSFLEKYPSDPLYL 196 (268)
T ss_dssp HHHHHHHHHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTGGGCHHHH
T ss_pred HHHHHHHHHHHHHHhhcccCCchhHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCChHHH
Confidence 345566677776666655332212222 2223334332 2 23578889999999998889 99999999
Q ss_pred HHHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Q 012772 393 LQYYTCGKLEWF-LGDTENAIKSMTEAVEI 421 (456)
Q Consensus 393 ~~l~~La~~~~~-~g~~~eA~~~l~~Al~i 421 (456)
....+.+..|.. +++.++|..+.++|.+-
T Consensus 197 GLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 197 ATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 999999988876 68999999999998876
No 254
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=88.81 E-value=3.5 Score=37.35 Aligned_cols=78 Identities=14% Similarity=0.102 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH---hcCCCCchHHHHHHHHHH
Q 012772 367 KEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF-LGDTENAIKSMTEAVEILRI---THGTNSPFMKELILKLEE 442 (456)
Q Consensus 367 ~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~-~g~~~eA~~~l~~Al~i~~~---~~G~~h~~~~~~~~~l~~ 442 (456)
+.|.+.|+++.++.+.-+||.||.+.....+.+..|.. +++.++|..+.++|.+--.. +++.++ +.+....|+.
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~eLd~L~ees--ykDstlImQL 250 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEES--YKDSTLIMQL 250 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHTGGGCCTTT--HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhccChhh--hHHHHHHHHH
Confidence 56888999999998889999999999999999888877 68999998888877654332 244444 4444444444
Q ss_pred HHHH
Q 012772 443 AQAE 446 (456)
Q Consensus 443 ~~~e 446 (456)
++..
T Consensus 251 LRDN 254 (261)
T 3ubw_A 251 LRDN 254 (261)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 255
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=88.72 E-value=3.2 Score=33.25 Aligned_cols=65 Identities=14% Similarity=0.044 Sum_probs=44.2
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCc-cHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Q 012772 311 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSV-NLMQTREKLIKILMELEDWKEALAYCQLTIPV 379 (456)
Q Consensus 311 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~-~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~ 379 (456)
.+.-|..+..+....+. ++.+.+.+.++...++ ..-..++.||..+.++|+|.+|++++..+|.+
T Consensus 38 ~F~yAw~Lv~S~~~~d~----~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~ 103 (126)
T 1nzn_A 38 QFEYAWCLVRTRYNDDI----RKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT 103 (126)
T ss_dssp HHHHHHHHTTSSSHHHH----HHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHH----HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 34555555555444432 2233344455554434 56788899999999999999999999999864
No 256
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=88.36 E-value=12 Score=33.33 Aligned_cols=56 Identities=13% Similarity=0.090 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHH
Q 012772 366 WKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF-LGDTENAIKSMTEAVEI 421 (456)
Q Consensus 366 ~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~-~g~~~eA~~~l~~Al~i 421 (456)
-+.|.+.|+++.++.+.-+||.||.+.....+.+..|.. +++.++|..+.++|.+-
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~ 205 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDE 205 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 357888899999999989999999999988899888776 58899998888887653
No 257
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=88.21 E-value=2.2 Score=43.00 Aligned_cols=63 Identities=17% Similarity=0.097 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 012772 350 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVE 420 (456)
Q Consensus 350 ~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~ 420 (456)
.+.+..||.+..+.+.+..|..||.+++.+ .|..|..++.||.++...|+.-+|.-+|.||+.
T Consensus 152 hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~--------~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~ 214 (497)
T 1ya0_A 152 QHCLVHLGDIARYRNQTSQAESYYRHAAQL--------VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIA 214 (497)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHHHh--------CCCCCchHHHHHHHHhcccccHHHHHHHHHHHh
Confidence 456677888888889999999999999864 688899999999999999999999999988764
No 258
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=87.69 E-value=3.3 Score=38.79 Aligned_cols=86 Identities=7% Similarity=-0.069 Sum_probs=55.1
Q ss_pred cCCh-HHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHcc--CHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 012772 321 CGNH-QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELE--DWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYT 397 (456)
Q Consensus 321 ~g~~-~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g--~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~ 397 (456)
.|.+ ++|++++.+++.+ -|.|+ .+.+.-+.++..+| ++++++++..++|.. .|.. . ...+.
T Consensus 45 ~~e~s~~aL~~t~~~L~~-----nP~~~---taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~----nPk~-y---~aW~~ 108 (306)
T 3dra_A 45 AEEYSERALHITELGINE-----LASHY---TIWIYRFNILKNLPNRNLYDELDWCEEIALD----NEKN-Y---QIWNY 108 (306)
T ss_dssp TTCCSHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHTCTTSCHHHHHHHHHHHHHH----CTTC-C---HHHHH
T ss_pred cCCCCHHHHHHHHHHHHH-----CcHHH---HHHHHHHHHHHHcccccHHHHHHHHHHHHHH----Cccc-H---HHHHH
Confidence 3444 6899988888764 35554 44555566777788 999999999998853 2322 2 22222
Q ss_pred HHHHH----HHc---CCHHHHHHHHHHHHHHH
Q 012772 398 CGKLE----WFL---GDTENAIKSMTEAVEIL 422 (456)
Q Consensus 398 La~~~----~~~---g~~~eA~~~l~~Al~i~ 422 (456)
-+.++ ... ++++++++++.+++++-
T Consensus 109 R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~ 140 (306)
T 3dra_A 109 RQLIIGQIMELNNNDFDPYREFDILEAMLSSD 140 (306)
T ss_dssp HHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhccccCCHHHHHHHHHHHHHhC
Confidence 22222 334 67888888888887643
No 259
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=87.45 E-value=11 Score=30.88 Aligned_cols=82 Identities=15% Similarity=-0.024 Sum_probs=58.4
Q ss_pred ccHHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHHHHHhcCCCCh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 012772 347 VNLMQTREKLIKILMELE---DWKEALAYCQLTIPVYQRVYPQFHP-LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 422 (456)
Q Consensus 347 ~~~~~~~~~L~~~~~~~g---~~~~A~~~~~~~l~~~e~~~g~~hp-~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~ 422 (456)
....++..++|..++... +..+++.+.+.++. .+| ..-..+|.||..+.++|+|++|+.+.+..+++
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~--------~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~- 106 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYK--------EAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH- 106 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHH--------HCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHT-
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh--------cCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhc-
Confidence 356777888888888754 44566666655543 233 46668999999999999999999998887763
Q ss_pred HHhcCCCCchHHHHHHHHH
Q 012772 423 RITHGTNSPFMKELILKLE 441 (456)
Q Consensus 423 ~~~~G~~h~~~~~~~~~l~ 441 (456)
-|++.....+...+.
T Consensus 107 ----eP~n~QA~~Lk~~Ie 121 (144)
T 1y8m_A 107 ----ERNNKQVGALKSMVE 121 (144)
T ss_dssp ----CCCCHHHHHHHHHHH
T ss_pred ----CCCcHHHHHHHHHHH
Confidence 566666665555444
No 260
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=87.36 E-value=5.4 Score=36.19 Aligned_cols=57 Identities=19% Similarity=0.129 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHH
Q 012772 367 KEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF-LGDTENAIKSMTEAVEILRI 424 (456)
Q Consensus 367 ~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~-~g~~~eA~~~l~~Al~i~~~ 424 (456)
+.|.+.|+++.++. .-+||.||.+.....+.+..|.. +++.++|..+.++|.+--..
T Consensus 173 e~a~~aY~~A~~iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai~ 230 (260)
T 2npm_A 173 EDALKAYKDATVVA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAIE 230 (260)
T ss_dssp HHHHHHHHHHHHHH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 56888899999988 88999999999988888888877 79999999888887764433
No 261
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=87.03 E-value=4 Score=43.09 Aligned_cols=91 Identities=13% Similarity=0.050 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHH--HHHhcC-CCChHHHHHHHHH---------H-HHHHHcCCHHHHHHHHHH
Q 012772 351 QTREKLIKILMELEDWKEALAYCQLTIPV--YQRVYP-QFHPLLGLQYYTC---------G-KLEWFLGDTENAIKSMTE 417 (456)
Q Consensus 351 ~~~~~L~~~~~~~g~~~~A~~~~~~~l~~--~e~~~g-~~hp~~~~~l~~L---------a-~~~~~~g~~~eA~~~l~~ 417 (456)
.....||..+.+.|+++.|++.+.++-+. ...++- ...+.....+-++ | .++..+|++++|+++|.+
T Consensus 682 ~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a~~~~~~ 761 (814)
T 3mkq_A 682 MKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAKDLLIK 761 (814)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHHHHHHHHH
Confidence 56789999999999999999999875221 111111 2222222222121 2 245567899999988764
Q ss_pred ------HHHHHHHhcCCCCchHHHHHHHHHH
Q 012772 418 ------AVEILRITHGTNSPFMKELILKLEE 442 (456)
Q Consensus 418 ------Al~i~~~~~G~~h~~~~~~~~~l~~ 442 (456)
|+.+- ++||+.+..+.+++...++
T Consensus 762 ~~~~~~A~~lA-~~~~~~~~~i~~~~~~~~~ 791 (814)
T 3mkq_A 762 SQRFSEAAFLG-STYGLGDNEVNDIVTKWKE 791 (814)
T ss_dssp TTCHHHHHHHH-HHTTCCHHHHHHHHHHHHH
T ss_pred cCChHHHHHHH-HHhCCChHHHHHHHHHHHH
Confidence 55544 4577776446666655553
No 262
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=86.91 E-value=10 Score=35.18 Aligned_cols=76 Identities=11% Similarity=-0.096 Sum_probs=51.0
Q ss_pred cCCCCccHHHHHHHHHHHHHH---c--c------CHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHc-----
Q 012772 342 YHPFSVNLMQTREKLIKILME---L--E------DWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFL----- 405 (456)
Q Consensus 342 l~p~h~~~~~~~~~L~~~~~~---~--g------~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~----- 405 (456)
+...++.-+..+...+.+... . | ...+|....++++++ ...-.-|..+.-||.+|...
T Consensus 144 l~~~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleL------DP~~~~GsA~~~LG~lY~~vPp~~g 217 (301)
T 3u64_A 144 LSRCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDL------WPSYQEGAVWNVLTKFYAAAPESFG 217 (301)
T ss_dssp HTTCCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHH------CTTHHHHHHHHHHHHHHHHSCTTTT
T ss_pred HHHcCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHh------CCCcccCHHHHHHHHHHHhCCCccC
Confidence 334445556666666655432 1 3 345666666666654 22333577888999999885
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 012772 406 GDTENAIKSMTEAVEILR 423 (456)
Q Consensus 406 g~~~eA~~~l~~Al~i~~ 423 (456)
|+.++|+.+|+||++|--
T Consensus 218 Gd~ekA~~~ferAL~LnP 235 (301)
T 3u64_A 218 GGMEKAHTAFEHLTRYCS 235 (301)
T ss_dssp CCHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHhCC
Confidence 999999999999999753
No 263
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=86.18 E-value=4.5 Score=32.70 Aligned_cols=81 Identities=15% Similarity=-0.012 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHHHHHhcCCCCh-HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Q 012772 349 LMQTREKLIKILMELE---DWKEALAYCQLTIPVYQRVYPQFHP-LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 424 (456)
Q Consensus 349 ~~~~~~~L~~~~~~~g---~~~~A~~~~~~~l~~~e~~~g~~hp-~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~ 424 (456)
..++..++|..+++.. +..+++.+...++. .+| ..-..+|.||..+.++|+|++|+++.+..+++
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~--------~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~--- 107 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYK--------EAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH--- 107 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHH--------HCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT---
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHh--------cCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh---
Confidence 4577788888887754 44456666554442 346 46778999999999999999999998877653
Q ss_pred hcCCCCchHHHHHHHHHH
Q 012772 425 THGTNSPFMKELILKLEE 442 (456)
Q Consensus 425 ~~G~~h~~~~~~~~~l~~ 442 (456)
-|++.....+...+.+
T Consensus 108 --eP~N~QA~~Lk~~Ie~ 123 (134)
T 3o48_A 108 --ERNNKQVGALKSMVED 123 (134)
T ss_dssp --CTTCHHHHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHHH
Confidence 4566666655555444
No 264
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=85.60 E-value=19 Score=33.65 Aligned_cols=21 Identities=14% Similarity=-0.211 Sum_probs=14.9
Q ss_pred HHHHHHHHHHcCCHHHHHHHH
Q 012772 395 YYTCGKLEWFLGDTENAIKSM 415 (456)
Q Consensus 395 l~~La~~~~~~g~~~eA~~~l 415 (456)
+.-+|..+++.|++.+|+.+|
T Consensus 137 H~~~a~~~~~e~~~~~A~~H~ 157 (312)
T 2wpv_A 137 HNTIGSKLLEGDFVYEAERYF 157 (312)
T ss_dssp HHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHhhcCCHHHHHHHH
Confidence 444577777778888888776
No 265
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=85.49 E-value=8.2 Score=38.77 Aligned_cols=82 Identities=13% Similarity=0.022 Sum_probs=56.9
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Q 012772 324 HQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEW 403 (456)
Q Consensus 324 ~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~ 403 (456)
+++|.+++++... .-+.|+ ..+++.|+..|.+.|++++|.++++++.. .| .-|. ..+++.|=..+.
T Consensus 86 l~~A~~lf~~M~~---~G~~Pd----~~tyn~lI~~~~~~g~~~~A~~l~~~M~~-----~g-~~Pd-~~tyn~lI~~~~ 151 (501)
T 4g26_A 86 LSRGFDIFKQMIV---DKVVPN----EATFTNGARLAVAKDDPEMAFDMVKQMKA-----FG-IQPR-LRSYGPALFGFC 151 (501)
T ss_dssp HHHHHHHHHHHHH---TTCCCC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHH-----TT-CCCC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---hCCCCC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHH-----cC-CCCc-cceehHHHHHHH
Confidence 4555555554432 222232 34678899999999999999999988753 12 2233 456777778888
Q ss_pred HcCCHHHHHHHHHHHH
Q 012772 404 FLGDTENAIKSMTEAV 419 (456)
Q Consensus 404 ~~g~~~eA~~~l~~Al 419 (456)
..|+.++|.+++++-.
T Consensus 152 ~~g~~~~A~~l~~~M~ 167 (501)
T 4g26_A 152 RKGDADKAYEVDAHMV 167 (501)
T ss_dssp HTTCHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHH
Confidence 9999999999998754
No 266
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=85.16 E-value=3.3 Score=42.42 Aligned_cols=86 Identities=9% Similarity=-0.112 Sum_probs=63.9
Q ss_pred hcC--ChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHHHHHhcCCCChHHHHHHH
Q 012772 320 SCG--NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELE-DWKEALAYCQLTIPVYQRVYPQFHPLLGLQYY 396 (456)
Q Consensus 320 ~~g--~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g-~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~ 396 (456)
.-| +++++++.+.+++++ .|.| ..+++.-+.+...+| .++++++++.+++. .+|.-...++
T Consensus 119 ~l~~~~~~~el~~~~k~l~~-----d~~N---~~aW~~R~~~l~~l~~~~~~el~~~~~~I~--------~~p~n~saW~ 182 (567)
T 1dce_A 119 RLPEPNWARELELCARFLEA-----DERN---FHCWDYRRFVAAQAAVAPAEELAFTDSLIT--------RNFSNYSSWH 182 (567)
T ss_dssp TCSSCCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTCCCHHHHHHHHHTTTT--------TTCCCHHHHH
T ss_pred HcccccHHHHHHHHHHHHhh-----cccc---ccHHHHHHHHHHHcCCChHHHHHHHHHHHH--------HCCCCccHHH
Confidence 345 679999999988864 3444 455666677777888 89999999988874 4566667777
Q ss_pred HHHHHHHHc--------------CCHHHHHHHHHHHHHH
Q 012772 397 TCGKLEWFL--------------GDTENAIKSMTEAVEI 421 (456)
Q Consensus 397 ~La~~~~~~--------------g~~~eA~~~l~~Al~i 421 (456)
..+.++..+ +.+++|++++.+|+.+
T Consensus 183 ~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~ 221 (567)
T 1dce_A 183 YRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFT 221 (567)
T ss_dssp HHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhh
Confidence 777777764 5578888888888865
No 267
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=84.17 E-value=3.3 Score=36.74 Aligned_cols=62 Identities=10% Similarity=-0.050 Sum_probs=52.5
Q ss_pred hcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHHHH
Q 012772 320 SCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME-LEDWKEALAYCQLTIPVYQ 381 (456)
Q Consensus 320 ~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~-~g~~~~A~~~~~~~l~~~e 381 (456)
..|+.+.|...|+.+..+..+-++|.||..+.+.-|.+..|.+ +++-++|..+.+++.++.+
T Consensus 137 ~~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~~ 199 (227)
T 2o8p_A 137 GLCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKILE 199 (227)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 3466788899999999998888999999998888888877665 6899999999999988653
No 268
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=84.01 E-value=8.8 Score=28.12 Aligned_cols=59 Identities=20% Similarity=0.148 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH--hcCCCCchHHHHHHHHHHHHHHHHh
Q 012772 391 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI--THGTNSPFMKELILKLEEAQAEASY 449 (456)
Q Consensus 391 ~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~--~~G~~h~~~~~~~~~l~~~~~e~~~ 449 (456)
.|..+..-|.-.-..|++++|..+|.+|++.+.. .+.++...-..+..++.+-...++.
T Consensus 10 ~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~~lk~e~d~~~k~~ir~K~~eY~~RAE~ 70 (83)
T 2v6y_A 10 MARKYAILAVKADKEGKVEDAITYYKKAIEVLSQIIVLYPESVARTAYEQMINEYKKRISY 70 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4555555566667899999999999999999876 3566666555566776666555544
No 269
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=82.56 E-value=12 Score=27.50 Aligned_cols=59 Identities=15% Similarity=0.092 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--cCCCCchHHHHHHHHHHHHHHHHh
Q 012772 391 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT--HGTNSPFMKELILKLEEAQAEASY 449 (456)
Q Consensus 391 ~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~--~G~~h~~~~~~~~~l~~~~~e~~~ 449 (456)
.|..+..-|.-.-..|++++|..+|.+|++.+... +.++...-..+..++.+-...++.
T Consensus 18 ~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~alk~e~d~~~k~~ir~K~~eY~~RAE~ 78 (83)
T 2w2u_A 18 MARKYAINAVKADKEGNAEEAITNYKKAIEVLAQLVSLYRDGSTAAIYEQMINEYKRRIEV 78 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSTTSSTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Confidence 34444455555567899999999999999988763 556655444455666665554443
No 270
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=82.19 E-value=5.6 Score=32.54 Aligned_cols=78 Identities=12% Similarity=-0.022 Sum_probs=49.2
Q ss_pred cCCHHHHHHHHHHH----------HHHHHHHHhhhhcCCh---HHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHH
Q 012772 295 VRSKEEIKKIASEV----------NILSKKTLALTSCGNH---QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILM 361 (456)
Q Consensus 295 ~~~~~~~~~~~~~~----------~~l~~~a~~~~~~g~~---~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~ 361 (456)
+++++++..+-++. ++.++-|..+..+... .+++.+++.+... +|. ..-+.++.||..+.
T Consensus 16 ~l~~eeL~~lr~qY~~E~~~~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~-----~~~--~~RdcLYyLAvg~y 88 (144)
T 1y8m_A 16 PLYPQQLEILRQQVVSEGGPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKE-----AES--RRRECLYYLTIGCY 88 (144)
T ss_dssp CCCHHHHHHHHHHHHHTTSTTSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHH-----CCS--THHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-----Ccc--chhHHHHHHHHHHH
Confidence 45666665543222 3345566665554443 3444444444321 222 46778899999999
Q ss_pred HccCHHHHHHHHHHHHHH
Q 012772 362 ELEDWKEALAYCQLTIPV 379 (456)
Q Consensus 362 ~~g~~~~A~~~~~~~l~~ 379 (456)
++|+|.+|++++..+|.+
T Consensus 89 kl~~Y~~Ar~y~d~lL~~ 106 (144)
T 1y8m_A 89 KLGEYSMAKRYVDTLFEH 106 (144)
T ss_dssp TTTCHHHHHHHHHHHHHT
T ss_pred HhhhHHHHHHHHHHHHhc
Confidence 999999999999998863
No 271
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=81.93 E-value=4.2 Score=40.87 Aligned_cols=76 Identities=11% Similarity=0.070 Sum_probs=62.6
Q ss_pred HhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCC---ChHHHHHHHHHHHHHHHcCCHHHHHHHH
Q 012772 339 KKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF---HPLLGLQYYTCGKLEWFLGDTENAIKSM 415 (456)
Q Consensus 339 ~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~---hp~~~~~l~~La~~~~~~g~~~eA~~~l 415 (456)
...++-+....+.+.+.|...|...+.+++|..+..++ .+|.. ....+..+|-+|+++.-+++|.+|.++|
T Consensus 220 ta~lr~D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~------~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L 293 (523)
T 4b4t_S 220 IASLKHDNETKAMLINLILRDFLNNGEVDSASDFISKL------EYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYI 293 (523)
T ss_dssp HCCSCSSSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHH------CSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHhcccCcchhHHHHHHHHHHHHccCcHHHHHHHHhcC------cCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 34566666667788888899999999999999997765 47744 3577889999999999999999999999
Q ss_pred HHHHH
Q 012772 416 TEAVE 420 (456)
Q Consensus 416 ~~Al~ 420 (456)
..|+.
T Consensus 294 ~~A~r 298 (523)
T 4b4t_S 294 IAAIR 298 (523)
T ss_dssp HHHTS
T ss_pred HHHHH
Confidence 98763
No 272
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=81.70 E-value=5.7 Score=32.08 Aligned_cols=77 Identities=12% Similarity=0.001 Sum_probs=49.4
Q ss_pred cCCHHHHHHHHHHH----------HHHHHHHHhhhhcCCh---HHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHH
Q 012772 295 VRSKEEIKKIASEV----------NILSKKTLALTSCGNH---QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILM 361 (456)
Q Consensus 295 ~~~~~~~~~~~~~~----------~~l~~~a~~~~~~g~~---~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~ 361 (456)
+++++++..+.++. ++.+.-|..+..+.+. .+++.+++.+.+ .+....-+.++-||..+.
T Consensus 17 ~~~~eeL~~l~~qy~~E~~~~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~-------~~~~~~Rd~LYyLAvg~y 89 (134)
T 3o48_A 17 PLYPQQLEILRQQVVSEGGPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYK-------EAESRRRECLYYLTIGCY 89 (134)
T ss_dssp CCCHHHHHHHHHHHHHTTGGGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHH-------HCGGGHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhCCCCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHh-------cCcchhHHHHHHHHHHHH
Confidence 45666665543322 3345566666555443 344555444432 111246788899999999
Q ss_pred HccCHHHHHHHHHHHHH
Q 012772 362 ELEDWKEALAYCQLTIP 378 (456)
Q Consensus 362 ~~g~~~~A~~~~~~~l~ 378 (456)
++|+|++|++++..+|.
T Consensus 90 klgdY~~Ar~y~d~lL~ 106 (134)
T 3o48_A 90 KLGEYSMAKRYVDTLFE 106 (134)
T ss_dssp HHTCHHHHHHHHHHHHT
T ss_pred HhhhHHHHHHHHHHHHh
Confidence 99999999999998885
No 273
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=81.49 E-value=4.4 Score=36.25 Aligned_cols=55 Identities=11% Similarity=0.064 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHH
Q 012772 325 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME-LEDWKEALAYCQLTIPV 379 (456)
Q Consensus 325 ~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~-~g~~~~A~~~~~~~l~~ 379 (456)
+.|.+.|+.+..+....|+|.||..+.+.-+.+..|.+ +++-++|..+++++.+-
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~ 202 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD 202 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 46677888888888778999999999988888887776 79999999999988763
No 274
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=81.20 E-value=37 Score=32.00 Aligned_cols=19 Identities=32% Similarity=0.258 Sum_probs=13.9
Q ss_pred HHHHHHHHcCCHHHHHHHH
Q 012772 397 TCGKLEWFLGDTENAIKSM 415 (456)
Q Consensus 397 ~La~~~~~~g~~~eA~~~l 415 (456)
-+|..+++.+++.+|+.+|
T Consensus 141 ~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 141 VVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp HHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHccCCHHHHHHHH
Confidence 4577777778888877775
No 275
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=81.07 E-value=11 Score=36.31 Aligned_cols=79 Identities=16% Similarity=0.157 Sum_probs=59.5
Q ss_pred HHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcC-CCCh
Q 012772 311 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYP-QFHP 389 (456)
Q Consensus 311 l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g-~~hp 389 (456)
+...+..+...|++.+++..+++++. .+|.+- .++..|+.++...|+..+|++.|++.-..+..-+| .-.|
T Consensus 174 ~~~~~~~~l~~g~~~~a~~~l~~~~~-----~~P~~E---~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~ 245 (388)
T 2ff4_A 174 HTAKAEAEIACGRASAVIAELEALTF-----EHPYRE---PLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGP 245 (388)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH-----HSTTCH---HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHH-----hCCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence 33445556678999999987777653 345553 45678999999999999999999999998888888 5567
Q ss_pred HHHHHHHH
Q 012772 390 LLGLQYYT 397 (456)
Q Consensus 390 ~~~~~l~~ 397 (456)
.+-..+..
T Consensus 246 ~l~~l~~~ 253 (388)
T 2ff4_A 246 TLRALNER 253 (388)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66555444
No 276
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4 tetrahedral Zn+2, antiparallel beta strand and alpha helix, NESG project; NMR {Escherichia coli} SCOP: g.39.1.9
Probab=80.53 E-value=0.57 Score=32.98 Aligned_cols=13 Identities=31% Similarity=0.772 Sum_probs=10.9
Q ss_pred CcccccHHhhhhc
Q 012772 47 VVWYCGSNCQKLD 59 (456)
Q Consensus 47 ~v~yCs~~C~~~~ 59 (456)
+++|||+.|+..|
T Consensus 27 ~rPFCSeRCr~iD 39 (68)
T 1lv3_A 27 FRPFCSKRCQLID 39 (68)
T ss_dssp CCSSSSHHHHHHH
T ss_pred CCcccCHHHHhhh
Confidence 4589999999775
No 277
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=80.51 E-value=5 Score=35.84 Aligned_cols=55 Identities=16% Similarity=0.115 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHH
Q 012772 325 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME-LEDWKEALAYCQLTIPV 379 (456)
Q Consensus 325 ~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~-~g~~~~A~~~~~~~l~~ 379 (456)
+.|.+.|+.+..+..+.|+|.||..+.+.-+.+..|.+ +++-++|..+++++.+-
T Consensus 150 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~ 205 (236)
T 3iqu_A 150 DSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDE 205 (236)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 45677888888888788999999999988888887765 69999999999988763
No 278
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=80.22 E-value=15 Score=40.14 Aligned_cols=93 Identities=5% Similarity=-0.127 Sum_probs=62.1
Q ss_pred HhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHH
Q 012772 316 LALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQY 395 (456)
Q Consensus 316 ~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l 395 (456)
+.+...|+.++|.++++...+...+-+.|+ ..+++.|+..|.+.|++++|.+++.++.. .-..|+. .+|
T Consensus 135 dglcK~G~leeA~~Lf~eM~~m~~kG~~Pd----vvTYNtLI~Glck~G~~~eA~~Lf~eM~~---~G~~PDv----vTY 203 (1134)
T 3spa_A 135 KCCLLTDQLPLAHHLLVVHHGQRQKRKLLT----LDMYNAVMLGWARQGAFKELVYVLFMVKD---AGLTPDL----LSY 203 (1134)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHSHHHHTTCC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHH---TTCCCCH----HHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHHhhcCCCCC----HhHHHHHHHHHHhCCCHHHHHHHHHHHHH---cCCCCcH----HHH
Confidence 345567999999998877654433333332 45788999999999999999999988753 2222443 334
Q ss_pred HHHHHHHHHcCCH-HHHHHHHHHHH
Q 012772 396 YTCGKLEWFLGDT-ENAIKSMTEAV 419 (456)
Q Consensus 396 ~~La~~~~~~g~~-~eA~~~l~~Al 419 (456)
+.|=..+...|+. ++|.+++++..
T Consensus 204 ntLI~glcK~G~~~e~A~~Ll~EM~ 228 (1134)
T 3spa_A 204 AAALQCMGRQDQDAGTIERCLEQMS 228 (1134)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 4444445566774 67777776543
No 279
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=79.45 E-value=8.5 Score=28.91 Aligned_cols=35 Identities=11% Similarity=0.131 Sum_probs=26.8
Q ss_pred HHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhc
Q 012772 308 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLY 342 (456)
Q Consensus 308 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l 342 (456)
.-.+...|......|+|++|+.+|..+++.....+
T Consensus 15 Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~al 49 (93)
T 1wfd_A 15 AVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVL 49 (93)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 34455666667778999999999999988776644
No 280
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=79.14 E-value=8.8 Score=36.87 Aligned_cols=90 Identities=11% Similarity=0.058 Sum_probs=51.6
Q ss_pred ChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHH---ccCHH-HHHHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 012772 323 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME---LEDWK-EALAYCQLTIPVYQRVYPQFHPLLGLQYYTC 398 (456)
Q Consensus 323 ~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~---~g~~~-~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~L 398 (456)
.+.+|+.++++++++ -|+. ..++..++.+|.. .+.+. ....-..+++.....+ ...|.-+..+.-+
T Consensus 214 ~~~~A~~l~e~Al~l-----DP~~---a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~--~~~~~~a~~~~al 283 (372)
T 3ly7_A 214 SLNRASELLGEIVQS-----SPEF---TYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTL--PELNNLSIIYQIK 283 (372)
T ss_dssp HHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTC--GGGTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhc--ccCCcCHHHHHHH
Confidence 356788888888754 2333 3333334444431 12111 1111122233222111 3335566677788
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHH
Q 012772 399 GKLEWFLGDTENAIKSMTEAVEIL 422 (456)
Q Consensus 399 a~~~~~~g~~~eA~~~l~~Al~i~ 422 (456)
|..++..|++++|+..+++|+++-
T Consensus 284 al~~l~~gd~d~A~~~l~rAl~Ln 307 (372)
T 3ly7_A 284 AVSALVKGKTDESYQAINTGIDLE 307 (372)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHhCCCHHHHHHHHHHHHhcC
Confidence 888888899999999999999983
No 281
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=79.02 E-value=5.9 Score=35.65 Aligned_cols=55 Identities=9% Similarity=0.038 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHH
Q 012772 325 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME-LEDWKEALAYCQLTIPV 379 (456)
Q Consensus 325 ~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~-~g~~~~A~~~~~~~l~~ 379 (456)
+.|.+.|+.+..+..+.|+|.||..+.+.-+.+..|.. +++-++|..+++++.+-
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~ 203 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDD 203 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 45677888888887788999999999988888887766 69999999999988764
No 282
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=78.91 E-value=6 Score=35.85 Aligned_cols=55 Identities=11% Similarity=0.064 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHH
Q 012772 325 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME-LEDWKEALAYCQLTIPV 379 (456)
Q Consensus 325 ~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~-~g~~~~A~~~~~~~l~~ 379 (456)
+.|.+.|+.+..+..+.|+|.||..+.+.-+.+..|.+ +++-++|..+++++.+-
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~ 228 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD 228 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 46677888888888788999999999998888887776 69999999999988764
No 283
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=77.57 E-value=6.8 Score=35.58 Aligned_cols=55 Identities=11% Similarity=0.106 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHH
Q 012772 325 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME-LEDWKEALAYCQLTIPV 379 (456)
Q Consensus 325 ~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~-~g~~~~A~~~~~~~l~~ 379 (456)
+.|.+.|+.+..+...-|+|.||..+.+.-+.+..|.+ +++-++|..+.+++.+-
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~ 207 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 46677888888888778999999999988888887776 69999999999887753
No 284
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=76.93 E-value=14 Score=38.65 Aligned_cols=95 Identities=12% Similarity=-0.048 Sum_probs=64.2
Q ss_pred hhcCChHHHH-HHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh-------cCCC---
Q 012772 319 TSCGNHQEVV-STYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRV-------YPQF--- 387 (456)
Q Consensus 319 ~~~g~~~~a~-~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~-------~g~~--- 387 (456)
..+|+.++|. ++|++++.. . |.+ ..+....+......|++++|.+.+++++...... .|..
T Consensus 354 ~~~~~~~~a~r~il~rAi~~----~-P~s---~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~ 425 (679)
T 4e6h_A 354 GEKNTDSTVITKYLKLGQQC----I-PNS---AVLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESA 425 (679)
T ss_dssp HHHSCCTTHHHHHHHHHHHH----C-TTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHH
T ss_pred HhcCcHHHHHHHHHHHHHHh----C-CCC---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhh
Confidence 3457777886 888888642 2 333 2345566777778899999999999999864211 1211
Q ss_pred ----ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 388 ----HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 388 ----hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
+......+...+.+....|..+.|+++|.+|++.
T Consensus 426 ~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~ 463 (679)
T 4e6h_A 426 INQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRL 463 (679)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHT
T ss_pred hhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 1134445666677777778889999999998764
No 285
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=75.64 E-value=7.2 Score=35.36 Aligned_cols=54 Identities=13% Similarity=0.143 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHH
Q 012772 325 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME-LEDWKEALAYCQLTIPV 379 (456)
Q Consensus 325 ~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~-~g~~~~A~~~~~~~l~~ 379 (456)
+.|.+.|+.+..+. ..|+|.||..+.+.-+.+..|.+ +++-++|..+++++.+-
T Consensus 173 e~a~~aY~~A~~iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~ 227 (260)
T 2npm_A 173 EDALKAYKDATVVA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEM 227 (260)
T ss_dssp HHHHHHHHHHHHHH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 46778899999888 88999999999988888887776 79999999999988763
No 286
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=75.46 E-value=36 Score=31.98 Aligned_cols=99 Identities=14% Similarity=0.069 Sum_probs=53.9
Q ss_pred HHHHHHHhhhhcCChH-HHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHc-------cCHHHHHHHHHHHHHHHH
Q 012772 310 ILSKKTLALTSCGNHQ-EVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL-------EDWKEALAYCQLTIPVYQ 381 (456)
Q Consensus 310 ~l~~~a~~~~~~g~~~-~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~-------g~~~~A~~~~~~~l~~~e 381 (456)
.+.+.+......|++. +|++++..++. +.|.|+..-..+..+....... +.+++++.++.+++..
T Consensus 31 ~~~~~~~~~~~~~e~s~eaL~~t~~~L~-----~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~-- 103 (331)
T 3dss_A 31 SATQAVFQKRQAGELDESVLELTSQILG-----ANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV-- 103 (331)
T ss_dssp HHHHHHHHHHHTTCCSHHHHHHHHHHHT-----TCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHH-----HCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHh--
Confidence 3344444445667775 67887777753 4566766555555444433321 1266777777776642
Q ss_pred HhcCCCChHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHH
Q 012772 382 RVYPQFHPLLGLQYYTCGKLEWFLG--DTENAIKSMTEAVEI 421 (456)
Q Consensus 382 ~~~g~~hp~~~~~l~~La~~~~~~g--~~~eA~~~l~~Al~i 421 (456)
+|.--..++.-+-++..+| .+++++.++.+++++
T Consensus 104 ------~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~ 139 (331)
T 3dss_A 104 ------NPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEA 139 (331)
T ss_dssp ------CTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHH
T ss_pred ------CCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHh
Confidence 3333334444444444555 356666666666553
No 287
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=74.19 E-value=17 Score=34.52 Aligned_cols=83 Identities=10% Similarity=0.026 Sum_probs=55.1
Q ss_pred CChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 012772 322 GNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELE-DWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGK 400 (456)
Q Consensus 322 g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g-~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~ 400 (456)
+..++|++++.+++.+ .|.|+. +.+.-+.++..+| +++++++++.++|. .+|.--...+.-+.
T Consensus 68 e~se~AL~lt~~~L~~-----nP~~yt---aWn~R~~iL~~l~~~l~eEL~~~~~~L~--------~nPKny~aW~hR~w 131 (349)
T 3q7a_A 68 EKSERALELTEIIVRM-----NPAHYT---VWQYRFSLLTSLNKSLEDELRLMNEFAV--------QNLKSYQVWHHRLL 131 (349)
T ss_dssp CCSHHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHHTTCCHHHHHHHHHHHHH--------TTCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh-----CchhHH---HHHHHHHHHHHhhhhHHHHHHHHHHHHH--------hCCCcHHHHHHHHH
Confidence 3456888888888754 355544 4444455666778 59999999998884 34444445555555
Q ss_pred HHHHc-C-CHHHHHHHHHHHHH
Q 012772 401 LEWFL-G-DTENAIKSMTEAVE 420 (456)
Q Consensus 401 ~~~~~-g-~~~eA~~~l~~Al~ 420 (456)
++..+ + +++++++++.++++
T Consensus 132 lL~~l~~~~~~~EL~~~~k~L~ 153 (349)
T 3q7a_A 132 LLDRISPQDPVSEIEYIHGSLL 153 (349)
T ss_dssp HHHHHCCSCCHHHHHHHHHHTS
T ss_pred HHHHhcCCChHHHHHHHHHHHH
Confidence 55555 6 77788888777765
No 288
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=73.48 E-value=19 Score=33.53 Aligned_cols=91 Identities=9% Similarity=-0.031 Sum_probs=64.2
Q ss_pred hhhcC--ChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHH-HHc---cCHHHHHHHHHHHHHHHHHhcCCCChHH
Q 012772 318 LTSCG--NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKIL-MEL---EDWKEALAYCQLTIPVYQRVYPQFHPLL 391 (456)
Q Consensus 318 ~~~~g--~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~-~~~---g~~~~A~~~~~~~l~~~e~~~g~~hp~~ 391 (456)
+...| +++++++.+..++. ..|.++..-..+..+..-. ... ++++++++++.+++.. +|.-
T Consensus 77 L~~l~~~~~~eeL~~~~~~L~-----~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~--------~pkn 143 (306)
T 3dra_A 77 LKNLPNRNLYDELDWCEEIAL-----DNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSS--------DPKN 143 (306)
T ss_dssp HHTCTTSCHHHHHHHHHHHHH-----HCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHH--------CTTC
T ss_pred HHHcccccHHHHHHHHHHHHH-----HCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHh--------CCCC
Confidence 33455 89999999888875 4677777666665555322 344 7899999999999863 3444
Q ss_pred HHHHHHHHHHHHHcCCHH--HHHHHHHHHHHH
Q 012772 392 GLQYYTCGKLEWFLGDTE--NAIKSMTEAVEI 421 (456)
Q Consensus 392 ~~~l~~La~~~~~~g~~~--eA~~~l~~Al~i 421 (456)
-...+.-+-+....|.++ ++++++.+++++
T Consensus 144 y~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~ 175 (306)
T 3dra_A 144 HHVWSYRKWLVDTFDLHNDAKELSFVDKVIDT 175 (306)
T ss_dssp HHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccChHHHHHHHHHHHHh
Confidence 445566666667778887 888888888864
No 289
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=73.23 E-value=8 Score=35.14 Aligned_cols=55 Identities=13% Similarity=0.163 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHHHhhc--CCCCccHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHH
Q 012772 325 QEVVSTYKMIEKLQKKLY--HPFSVNLMQTREKLIKILME-LEDWKEALAYCQLTIPV 379 (456)
Q Consensus 325 ~~a~~~~~~~~~~~~~~l--~p~h~~~~~~~~~L~~~~~~-~g~~~~A~~~~~~~l~~ 379 (456)
+.|.+.|+.+..+..+-+ +|.||..+.+.-+.+..|.+ +++-++|..+++++.+-
T Consensus 169 e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 169 KQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 456677888888877788 99999999998888887775 69999999999998764
No 290
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=73.04 E-value=18 Score=30.71 Aligned_cols=98 Identities=13% Similarity=0.012 Sum_probs=58.7
Q ss_pred hhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhc--C-CCChHHHHHH
Q 012772 319 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVY--P-QFHPLLGLQY 395 (456)
Q Consensus 319 ~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~--g-~~hp~~~~~l 395 (456)
.+.|+++.|.++.+.+ ..-..+..|+......|+++-|.+.++++-+.-...+ - -........+
T Consensus 16 L~lg~l~~A~e~a~~l-------------~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kl 82 (177)
T 3mkq_B 16 LEYGNLDAALDEAKKL-------------NDSITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKM 82 (177)
T ss_dssp HHTTCHHHHHHHHHHH-------------CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHH
T ss_pred HhcCCHHHHHHHHHHh-------------CCHHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHH
Confidence 4568999998875543 1234678899999999999999988886644322111 0 0111111122
Q ss_pred HHH----------HHHHHHcCCHHHHHHHHHHHHH-----HHHHhcCCC
Q 012772 396 YTC----------GKLEWFLGDTENAIKSMTEAVE-----ILRITHGTN 429 (456)
Q Consensus 396 ~~L----------a~~~~~~g~~~eA~~~l~~Al~-----i~~~~~G~~ 429 (456)
-++ ...++.+|++++++++|.++-. .+.++||++
T Consensus 83 a~iA~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~~eA~~~A~t~g~~ 131 (177)
T 3mkq_B 83 QNIAQTREDFGSMLLNTFYNNSTKERSSIFAEGGSLPLAYAVAKANGDE 131 (177)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHTTCH
T ss_pred HHHHHHCccHHHHHHHHHHcCCHHHHHHHHHHCCChHHHHHHHHHcCcH
Confidence 122 2335568889999998876432 455567763
No 291
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=72.01 E-value=18 Score=37.77 Aligned_cols=97 Identities=10% Similarity=0.046 Sum_probs=58.1
Q ss_pred hhhcCChHHHHHHHHHHHHHHHhhc------CCCC--------ccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh
Q 012772 318 LTSCGNHQEVVSTYKMIEKLQKKLY------HPFS--------VNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRV 383 (456)
Q Consensus 318 ~~~~g~~~~a~~~~~~~~~~~~~~l------~p~h--------~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~ 383 (456)
....|++++|.++|++++....+.+ -|.+ .....+....+....+.|..+.|...+.+++..
T Consensus 388 ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~---- 463 (679)
T 4e6h_A 388 YELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRL---- 463 (679)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHT----
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----
Confidence 3456899999999999886431111 0221 123345555666677788999999999888754
Q ss_pred cCCCChHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHH
Q 012772 384 YPQFHPLLGLQYYTCGKLEWFLGD-TENAIKSMTEAVEI 421 (456)
Q Consensus 384 ~g~~hp~~~~~l~~La~~~~~~g~-~~eA~~~l~~Al~i 421 (456)
.|...+ ..+...|.+-...|+ .+.|.++|+++++.
T Consensus 464 ~~~~~~---~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~ 499 (679)
T 4e6h_A 464 KKLVTP---DIYLENAYIEYHISKDTKTACKVLELGLKY 499 (679)
T ss_dssp GGGSCT---HHHHHHHHHHHTTTSCCHHHHHHHHHHHHH
T ss_pred cCCCCh---HHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 122221 123344555544443 67777777777764
No 292
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=70.53 E-value=73 Score=30.86 Aligned_cols=60 Identities=10% Similarity=0.128 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-hcCCCC
Q 012772 368 EALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI-THGTNS 430 (456)
Q Consensus 368 ~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~-~~G~~h 430 (456)
.+++++++++.+-+++|...| -+-|.-+|--+...+++.+|+..+-+|-.++.. .|+.+.
T Consensus 282 ~~~~Lf~~AI~~ar~~Y~~~h---vYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~reD 342 (489)
T 4gq4_A 282 DPLTLYHKGIASAKTYYRDEH---IYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCRED 342 (489)
T ss_dssp CHHHHHHHHHHHHHHHSTTCC---SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCTTC
T ss_pred CHHHHHHHHHHHHHHhcccCc---ccceeecchHHHHhhhHHHHHHHhhhhhhhhhhcccccch
Confidence 467899999999999999888 346667788888899999999999998887765 455554
No 293
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=69.84 E-value=20 Score=37.84 Aligned_cols=59 Identities=12% Similarity=0.085 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 012772 351 QTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTE 417 (456)
Q Consensus 351 ~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~ 417 (456)
.++...+..++..|+|+-|++.++++..+ .|.--..++.||++|..+|+++.|+-.|.-
T Consensus 338 ~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~--------aPseF~tW~~La~vYi~l~d~e~ALLtLNS 396 (754)
T 4gns_B 338 DLLNIQTNFLLNRGDYELALGVSNTSTEL--------ALDSFESWYNLARCHIKKEEYEKALFAINS 396 (754)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSSCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHhc--------CchhhHHHHHHHHHHHHhccHHHHHHHHhc
Confidence 34555667777889999999999999753 455567899999999999999999876653
No 294
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=69.46 E-value=66 Score=30.91 Aligned_cols=100 Identities=8% Similarity=-0.016 Sum_probs=64.1
Q ss_pred cCChHHHHHHHHHHHHHHHhhc---------CCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHH
Q 012772 321 CGNHQEVVSTYKMIEKLQKKLY---------HPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 391 (456)
Q Consensus 321 ~g~~~~a~~~~~~~~~~~~~~l---------~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~ 391 (456)
..+.+++++.++.+.....+.. -......+.+...++..|...|+..+|..+..++-......-+.+-...
T Consensus 89 ~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~v~ 168 (393)
T 4b4t_O 89 SKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLRIT 168 (393)
T ss_dssp TTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSSHHH
T ss_pred cCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccHHHH
Confidence 3567777776665533221111 1122346667778899999999999999999999887776544433455
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 012772 392 GLQYYTCGKLEWFLGDTENAIKSMTEAVE 420 (456)
Q Consensus 392 ~~~l~~La~~~~~~g~~~eA~~~l~~Al~ 420 (456)
+..+.-.+..+...++++++....-.++.
T Consensus 169 ~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 169 NSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 55555567777777888765554444433
No 295
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=68.85 E-value=32 Score=25.67 Aligned_cols=37 Identities=8% Similarity=-0.054 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhc
Q 012772 390 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITH 426 (456)
Q Consensus 390 ~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~ 426 (456)
..|..+...|.-.-..|++++|..+|.+|++.+....
T Consensus 13 ~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~al 49 (93)
T 1wfd_A 13 TAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVL 49 (93)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 4566666777777789999999999999999988754
No 296
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=67.86 E-value=2.8 Score=27.44 Aligned_cols=28 Identities=25% Similarity=0.558 Sum_probs=21.8
Q ss_pred cCCCCCC-CcccCCCCCCeeeccCCCcCC
Q 012772 270 KDDGCSG-FLLRDSDDKGFTCQQCGLVRS 297 (456)
Q Consensus 270 ~C~~C~~-~~~~~~~~~~~~C~~C~~~~~ 297 (456)
.|+.|.+ .+..+.....+.|..||....
T Consensus 7 ~CP~C~~~~l~~d~~~gelvC~~CG~v~~ 35 (50)
T 1pft_A 7 VCPACESAELIYDPERGEIVCAKCGYVIE 35 (50)
T ss_dssp SCTTTSCCCEEEETTTTEEEESSSCCBCC
T ss_pred eCcCCCCcceEEcCCCCeEECcccCCccc
Confidence 3689988 676676677899999998654
No 297
>3o10_A Sacsin; all-helical domain, homodimerization, chaperone; 1.90A {Homo sapiens}
Probab=67.82 E-value=24 Score=28.58 Aligned_cols=43 Identities=12% Similarity=-0.031 Sum_probs=33.4
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHhhhhcCChHHHHHHHHHHHHH
Q 012772 295 VRSKEEIKKIASEVNILSKKTLALTSCGNHQEVVSTYKMIEKL 337 (456)
Q Consensus 295 ~~~~~~~~~~~~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~ 337 (456)
..+.+++..+.......++.|......|.|+.|.-..+++.+.
T Consensus 3 ~~~~ee~~~wl~~A~~dl~~A~~~~~~g~y~~a~F~aqQA~Ek 45 (141)
T 3o10_A 3 VGNPVEARRWLRQARANFSAARNDLHKNANEWVCFKCYLSTKL 45 (141)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHGGGTTTTCHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHhhhhHHhhHHhhCccceEeeehhHHHHH
Confidence 3467888899998988899999888999998776655555443
No 298
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=67.70 E-value=43 Score=30.47 Aligned_cols=52 Identities=19% Similarity=0.068 Sum_probs=37.6
Q ss_pred hhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHH
Q 012772 317 ALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLT 376 (456)
Q Consensus 317 ~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~ 376 (456)
.+...|+.++|++..+.-++ .+|.=+..+..|++++.-.|+|++|..-++..
T Consensus 6 ~ll~~g~L~~al~~~~~~VR--------~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~ 57 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIK--------ASPKDASLRSSFIELLCIDGDFERADEQLMQS 57 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHH--------TCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHH--------hCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 34567888888876554443 23444677888999999999999998776543
No 299
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=67.61 E-value=46 Score=32.62 Aligned_cols=81 Identities=14% Similarity=-0.012 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCC-hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcC
Q 012772 349 LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH-PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHG 427 (456)
Q Consensus 349 ~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~h-p~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G 427 (456)
.+++...|+.+|...|+|.+|......+. ...+|... ......+....+++...+++..|..++.+|..-....
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~---~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~-- 210 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQ---VETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKN-- 210 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHH---HHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS--
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHH---HHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhccc--
Confidence 56777889999999999999999988765 34666443 4555677778999999999999999999986543333
Q ss_pred CCCchHH
Q 012772 428 TNSPFMK 434 (456)
Q Consensus 428 ~~h~~~~ 434 (456)
+.+|...
T Consensus 211 ~~~~~lk 217 (445)
T 4b4t_P 211 PKYESLK 217 (445)
T ss_dssp SCCHHHH
T ss_pred CCcHHHH
Confidence 2455443
No 300
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=66.54 E-value=1.2 Score=32.85 Aligned_cols=28 Identities=14% Similarity=0.386 Sum_probs=21.6
Q ss_pred CccccCCCCCCCcccCCCCCCeeeccCCCc
Q 012772 266 GYRCKDDGCSGFLLRDSDDKGFTCQQCGLV 295 (456)
Q Consensus 266 ~f~C~C~~C~~~~~~~~~~~~~~C~~C~~~ 295 (456)
.|.| +.|.......+....|.|+.|+..
T Consensus 27 ~y~C--p~CG~~~v~r~atGiW~C~~Cg~~ 54 (83)
T 1vq8_Z 27 DHAC--PNCGEDRVDRQGTGIWQCSYCDYK 54 (83)
T ss_dssp CEEC--SSSCCEEEEEEETTEEEETTTCCE
T ss_pred cCcC--CCCCCcceeccCCCeEECCCCCCE
Confidence 5655 699887666666778999999875
No 301
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=65.69 E-value=45 Score=31.66 Aligned_cols=71 Identities=20% Similarity=0.163 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh-cCCCCchHHHHHHHHHHHH
Q 012772 368 EALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT-HGTNSPFMKELILKLEEAQ 444 (456)
Q Consensus 368 ~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~-~G~~h~~~~~~~~~l~~~~ 444 (456)
.++.++.+++..-++.|+-.|.. .+.-+|.-+...+++.||...+-+|-.+.... |..+. .+++..+-++-
T Consensus 275 ~~l~L~~~AI~sa~~yY~n~HvY---PYtylgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reD---eEIYKEf~eIA 346 (472)
T 3re2_A 275 PAEELFKEAITVAKREYSDHHIY---PYTYLGGYYYRKKKYYEAIASWVDAGYVAGKYNYSKDD---EEMYKEFHEIA 346 (472)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSH---HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGG---HHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCcc---chhhhhhhhhhcchHHHHHHHHHHHHHHHHHcCCCccH---HHHHHHHHHHH
Confidence 38999999999999999988853 56677888889999999999999888876653 33322 34544444443
No 302
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=64.60 E-value=38 Score=24.62 Aligned_cols=37 Identities=11% Similarity=-0.010 Sum_probs=29.4
Q ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Q 012772 389 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 425 (456)
Q Consensus 389 p~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~ 425 (456)
...|..+..-|.-.-..|++++|..+|.+|++.+...
T Consensus 10 l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~a 46 (85)
T 2v6x_A 10 LTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLA 46 (85)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 3456666666766667899999999999999987764
No 303
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=63.27 E-value=24 Score=34.47 Aligned_cols=78 Identities=10% Similarity=0.001 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCC
Q 012772 349 LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGT 428 (456)
Q Consensus 349 ~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~ 428 (456)
..++...+|..|.+.|++++|.+.+.++.. ...+..| +...++.+-.++...+++..+..++.+|..+....
T Consensus 130 ~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~---~~~~~~~--kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~--- 201 (429)
T 4b4t_R 130 QAQAWINLGEYYAQIGDKDNAEKTLGKSLS---KAISTGA--KIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKG--- 201 (429)
T ss_dssp CSSCCHHHHHHHHHHCCCTTHHHHHHHHHH---HHTCCCS--HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---hcCChHH--HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcC---
Confidence 345567899999999999999999988653 4556554 45677888888999999999999999998877653
Q ss_pred CCchHH
Q 012772 429 NSPFMK 434 (456)
Q Consensus 429 ~h~~~~ 434 (456)
.+|...
T Consensus 202 ~d~~~~ 207 (429)
T 4b4t_R 202 GDWERR 207 (429)
T ss_dssp CCTHHH
T ss_pred CCHHHH
Confidence 455443
No 304
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=62.97 E-value=93 Score=29.84 Aligned_cols=76 Identities=13% Similarity=0.068 Sum_probs=54.2
Q ss_pred HHHHHHccCHHHHHHHHHHHHHHHHHhcCC--------C-ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcC
Q 012772 357 IKILMELEDWKEALAYCQLTIPVYQRVYPQ--------F-HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHG 427 (456)
Q Consensus 357 ~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~--------~-hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G 427 (456)
..+.....+.++|+++..++.......+.. . .-........++..|...|+.++|.++++++...+...-|
T Consensus 83 ~~~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~ 162 (393)
T 4b4t_O 83 LASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDS 162 (393)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCC
Confidence 345556778999999988775544443332 1 1234556677889999999999999999999999988655
Q ss_pred CCCch
Q 012772 428 TNSPF 432 (456)
Q Consensus 428 ~~h~~ 432 (456)
.+...
T Consensus 163 ~~~~v 167 (393)
T 4b4t_O 163 IPLRI 167 (393)
T ss_dssp SSSHH
T ss_pred ccHHH
Confidence 54333
No 305
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=62.25 E-value=19 Score=26.29 Aligned_cols=36 Identities=17% Similarity=0.251 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhh
Q 012772 306 SEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKL 341 (456)
Q Consensus 306 ~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~ 341 (456)
+..-.+..+|......|++++|+.+|+.+++.....
T Consensus 17 ~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~a 52 (83)
T 2w2u_A 17 EMARKYAINAVKADKEGNAEEAITNYKKAIEVLAQL 52 (83)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 344556677777788899999999999998876553
No 306
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=61.91 E-value=25 Score=33.17 Aligned_cols=82 Identities=10% Similarity=-0.119 Sum_probs=56.4
Q ss_pred ChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccC-HHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 012772 323 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELED-WKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKL 401 (456)
Q Consensus 323 ~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~-~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~ 401 (456)
.++++++.+.+++++ +|.|+. +...-+.+....|. ++++++++.+++. .||.--..++..+.+
T Consensus 125 ~~~~EL~~~~k~l~~-----dprNy~---AW~~R~~vl~~l~~~~~eel~~~~~~I~--------~~p~N~SAW~~R~~l 188 (331)
T 3dss_A 125 NWARELELCARFLEA-----DERNFH---CWDYRRFVAAQAAVAPAEELAFTDSLIT--------RNFSNYSSWHYRSCL 188 (331)
T ss_dssp CHHHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHHTTCCHHHHHHHHHHHHH--------HCSCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHHhCcCHHHHHHHHHHHHH--------HCCCCHHHHHHHHHH
Confidence 478888888888753 455544 44455556667787 6999999998885 344445556666666
Q ss_pred HHHc--------------CCHHHHHHHHHHHHH
Q 012772 402 EWFL--------------GDTENAIKSMTEAVE 420 (456)
Q Consensus 402 ~~~~--------------g~~~eA~~~l~~Al~ 420 (456)
...+ +.++++++++.+|+.
T Consensus 189 l~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~ 221 (331)
T 3dss_A 189 LPQLHPQPDSGPQGRLPENVLLKELELVQNAFF 221 (331)
T ss_dssp HHHHSCCC------CCCHHHHHHHHHHHHHHHH
T ss_pred HHHhhhccccccccccchHHHHHHHHHHHHHHH
Confidence 6555 457788888888775
No 307
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=61.51 E-value=2.8 Score=27.57 Aligned_cols=25 Identities=16% Similarity=0.491 Sum_probs=17.6
Q ss_pred CCCCCCCcccCCCCCCeeeccCCCc
Q 012772 271 DDGCSGFLLRDSDDKGFTCQQCGLV 295 (456)
Q Consensus 271 C~~C~~~~~~~~~~~~~~C~~C~~~ 295 (456)
|++|...+...+..+.+.|.+||.+
T Consensus 22 CP~CG~~~fm~~~~~R~~C~kCG~t 46 (50)
T 3j20_Y 22 CPRCGPGVFMADHGDRWACGKCGYT 46 (50)
T ss_dssp CSSSCSSCEEEECSSEEECSSSCCE
T ss_pred CCCCCCceEEecCCCeEECCCCCCE
Confidence 6799875444344568999999963
No 308
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2
Probab=60.97 E-value=89 Score=27.66 Aligned_cols=134 Identities=8% Similarity=-0.040 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCC---CCccHH--------------------------
Q 012772 300 EIKKIASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHP---FSVNLM-------------------------- 350 (456)
Q Consensus 300 ~~~~~~~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p---~h~~~~-------------------------- 350 (456)
...+....+.+.+++-+....+-+|++|+++.+++.+.....-.+ .+....
T Consensus 10 ~~~~~~~wl~~~~deLDv~IA~r~feeAv~lle~~~~~l~~~~~~~~~~~~~~~~~l~~ki~eR~~~L~~~L~~~l~~~~ 89 (235)
T 2d2s_A 10 STAQRLKFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSILSSN 89 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred ccchhHHHHHcccHHHHHHHHHHhHHHHHHHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 344445556666677777777888888888877776655432211 111111
Q ss_pred --HHHHHHHHHHHHccCHHHHHHHHHHHHH--HHHHhcC-CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Q 012772 351 --QTREKLIKILMELEDWKEALAYCQLTIP--VYQRVYP-QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 425 (456)
Q Consensus 351 --~~~~~L~~~~~~~g~~~~A~~~~~~~l~--~~e~~~g-~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~ 425 (456)
.........+.++|+-++|.+.+.++-. +...+.+ ...-..+....+|+.+++ ..+.++...+...
T Consensus 90 ~~~~~r~~v~~L~rLg~~~~A~~lfL~~rs~~i~~~~r~l~~~gd~~~Yi~~Ls~i~F---------s~I~~t~~~f~~~ 160 (235)
T 2d2s_A 90 EIVHLKSGTENMIKLGLPEQALDLFLQNRSNFIQDLILQIGSVDNPTNYLTQLAVIRF---------QTIKKTVEDFQDI 160 (235)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCC--CCSHHHHHHHHHHHHH---------HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCChhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHH---------HHHHHHHHHHHHH
Confidence 1122233455667888888888755443 2222222 222445666777777765 5677788888888
Q ss_pred cCCCCchHHHHHHHHHH
Q 012772 426 HGTNSPFMKELILKLEE 442 (456)
Q Consensus 426 ~G~~h~~~~~~~~~l~~ 442 (456)
||++.|.....+-.++.
T Consensus 161 F~~~~~~~~S~lV~Wa~ 177 (235)
T 2d2s_A 161 FKELGAKISSILVDWCS 177 (235)
T ss_dssp STTCCHHHHHHHHHHHH
T ss_pred hCCCCcccccHHHHHHH
Confidence 88755555444444443
No 309
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=60.93 E-value=1.2e+02 Score=29.32 Aligned_cols=55 Identities=11% Similarity=0.155 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Q 012772 368 EALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 425 (456)
Q Consensus 368 ~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~ 425 (456)
.++.++.+++...++.|+-.|.. -|.-+|--+...+++.||...+-+|-.++...
T Consensus 297 ~~~~L~~~AI~sa~~~Y~n~HvY---PYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~Y 351 (550)
T 3u84_A 297 DPLTLYHKGIASAKTYYRDEHIY---PYMYLAGYHCRNRNVREALQAWADTATVIQDY 351 (550)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSH---HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTS
T ss_pred CHHHHHHHHHHHHHHHhccCCcc---ceeecchhhhhcchHHHHHHHHHHHHHHHHHc
Confidence 48899999999999999988853 56677888889999999999999888877653
No 310
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=60.75 E-value=15 Score=38.83 Aligned_cols=53 Identities=15% Similarity=0.127 Sum_probs=41.1
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHH
Q 012772 314 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQ 374 (456)
Q Consensus 314 ~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~ 374 (456)
+|.-+.++|+++-|+++.+++... -|. -..++..|+.+|+.+|+|+.|+-...
T Consensus 343 Qa~FLl~K~~~elAL~~Ak~AV~~-----aPs---eF~tW~~La~vYi~l~d~e~ALLtLN 395 (754)
T 4gns_B 343 QTNFLLNRGDYELALGVSNTSTEL-----ALD---SFESWYNLARCHIKKEEYEKALFAIN 395 (754)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----CSS---CHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHhccCcHHHHHHHHHHHHhc-----Cch---hhHHHHHHHHHHHHhccHHHHHHHHh
Confidence 344456789999999988888654 233 36788999999999999999996654
No 311
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=59.91 E-value=48 Score=24.27 Aligned_cols=46 Identities=11% Similarity=-0.052 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhc-CCCCchHHHH
Q 012772 391 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITH-GTNSPFMKEL 436 (456)
Q Consensus 391 ~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~-G~~h~~~~~~ 436 (456)
.|..+..-|.-.-..|++++|..+|.+|++.+.... +...|...+.
T Consensus 15 ~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~alk~e~d~~~k~~ 61 (86)
T 4a5x_A 15 AAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCN 61 (86)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhCCCHHHHHH
Confidence 344555556666788999999999999999887664 3334544443
No 312
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=58.53 E-value=88 Score=30.80 Aligned_cols=73 Identities=18% Similarity=0.092 Sum_probs=54.0
Q ss_pred cHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCC--CC--hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 012772 348 NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQ--FH--PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 422 (456)
Q Consensus 348 ~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~--~h--p~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~ 422 (456)
.++...+.|..+|.++++...+....+.+-. . ...|+ .+ ......+|-+|++++.+++|.+|.+.|.+|..-+
T Consensus 174 ~~l~l~n~L~kiYFkl~~~~lckni~k~i~~-~-~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~l 250 (455)
T 3t5v_B 174 ILLYLVNKLNNIYFRIESPQLCSNIFKNFQP-K-SMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSL 250 (455)
T ss_dssp HHHHHHHHHHHHHHHSSCCTTHHHHHHTHHH-H-CCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHhcc-C-CCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhc
Confidence 3566678888999999997766666543322 1 11111 12 3677889999999999999999999999999883
No 313
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=58.50 E-value=47 Score=25.99 Aligned_cols=35 Identities=17% Similarity=0.160 Sum_probs=26.1
Q ss_pred HHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhc
Q 012772 308 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLY 342 (456)
Q Consensus 308 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l 342 (456)
+..+...|...-..|+|++|+.+|..+++.+...+
T Consensus 18 Ai~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~al 52 (117)
T 2cpt_A 18 AIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVV 52 (117)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 33445555566667999999999999998876654
No 314
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=58.06 E-value=46 Score=25.99 Aligned_cols=37 Identities=16% Similarity=0.074 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhc
Q 012772 390 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITH 426 (456)
Q Consensus 390 ~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~ 426 (456)
..|..+...|.-.-..|+|++|+.+|.+|++.+....
T Consensus 16 ~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~al 52 (117)
T 2cpt_A 16 QKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVV 52 (117)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 3455555556556678999999999999999888765
No 315
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=57.81 E-value=64 Score=35.42 Aligned_cols=70 Identities=9% Similarity=-0.205 Sum_probs=54.9
Q ss_pred CccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 012772 346 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAV 419 (456)
Q Consensus 346 h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al 419 (456)
......+++.|+..|.+.|++++|.+++.++....++- ..|. ..+|+.|=..+...|+.++|.+++++-.
T Consensus 123 ~~~~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG---~~Pd-vvTYNtLI~Glck~G~~~eA~~Lf~eM~ 192 (1134)
T 3spa_A 123 LSGQQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKR---KLLT-LDMYNAVMLGWARQGAFKELVYVLFMVK 192 (1134)
T ss_dssp CCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHH---TTCC-HHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcC---CCCC-HhHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 44456778999999999999999999998776544432 2343 3578888888889999999999998754
No 316
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=57.29 E-value=4.4 Score=26.72 Aligned_cols=21 Identities=19% Similarity=0.384 Sum_probs=15.8
Q ss_pred CCCCCCCcccCCCCCCeeeccCCCc
Q 012772 271 DDGCSGFLLRDSDDKGFTCQQCGLV 295 (456)
Q Consensus 271 C~~C~~~~~~~~~~~~~~C~~C~~~ 295 (456)
|++|... .....|.|.+||.+
T Consensus 17 CpkC~a~----~~~gaw~CrKCG~~ 37 (51)
T 3j21_g 17 CLRCGAT----NPWGAKKCRKCGYK 37 (51)
T ss_dssp CTTTCCE----ECTTCSSCSSSSSC
T ss_pred CCCCCCc----CCCCceecCCCCCc
Confidence 5688864 33568999999975
No 317
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=57.09 E-value=55 Score=23.98 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=26.9
Q ss_pred HHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhc
Q 012772 308 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLY 342 (456)
Q Consensus 308 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l 342 (456)
...+...|......|++++|+.+|..+++.....+
T Consensus 16 A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~al 50 (86)
T 4a5x_A 16 AATVLKRAVELDSESRYPQALVCYQEGIDLLLQVL 50 (86)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 34455666677788999999999999988766544
No 318
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=56.27 E-value=24 Score=25.72 Aligned_cols=36 Identities=8% Similarity=0.151 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhh
Q 012772 306 SEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKL 341 (456)
Q Consensus 306 ~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~ 341 (456)
+..-.+..+|......|++++|+.+|+.+++.....
T Consensus 9 ~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~~ 44 (83)
T 2v6y_A 9 DMARKYAILAVKADKEGKVEDAITYYKKAIEVLSQI 44 (83)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 344556677777788899999999999998876554
No 319
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=54.59 E-value=22 Score=30.19 Aligned_cols=52 Identities=10% Similarity=0.002 Sum_probs=41.4
Q ss_pred HHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 357 IKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 357 ~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
..+.++.|+++.|.+.++.+ + .-..+.+||...+.+|+++-|+..|+++.+.
T Consensus 12 F~LAL~lg~l~~A~e~a~~l----------~---~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~ 63 (177)
T 3mkq_B 12 FDLALEYGNLDAALDEAKKL----------N---DSITWERLIQEALAQGNASLAEMIYQTQHSF 63 (177)
T ss_dssp HHHHHHTTCHHHHHHHHHHH----------C---CHHHHHHHHHHHHHTTCHHHHHHHHHHTTCH
T ss_pred HHHHHhcCCHHHHHHHHHHh----------C---CHHHHHHHHHHHHHcCChHHHHHHHHHhCCH
Confidence 34566889999999998754 2 2447889999999999999999999986543
No 320
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=53.54 E-value=32 Score=24.83 Aligned_cols=52 Identities=10% Similarity=0.118 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCC-CCchHHHHHHHHHHHHHHHH
Q 012772 394 QYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGT-NSPFMKELILKLEEAQAEAS 448 (456)
Q Consensus 394 ~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~-~h~~~~~~~~~l~~~~~e~~ 448 (456)
...++|.=+...|+|+.|..+|+-|++-+.+..-. +.|..+ .++.++++++.
T Consensus 14 e~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~~~~d~~~r---~kW~~~~~ei~ 66 (78)
T 2rpa_A 14 ENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTHLR---QKWQQVWQEIN 66 (78)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTCSCHHHH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhcCCHHHH---HhHHHHHHHHH
Confidence 34566788888999999999999999877765432 233332 45555555544
No 321
>1vh6_A Flagellar protein FLIS; structural genomics, unknown function; HET: MSE; 2.50A {Bacillus subtilis} SCOP: a.24.19.1
Probab=52.56 E-value=54 Score=26.72 Aligned_cols=85 Identities=5% Similarity=-0.029 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHH-------------ccCH
Q 012772 300 EIKKIASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME-------------LEDW 366 (456)
Q Consensus 300 ~~~~~~~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~-------------~g~~ 366 (456)
-+.-+.+.+-..+..|....++|+++++-....++..+.......-+.. ..+..+|..+|-. ...+
T Consensus 25 Li~mLydgal~~l~~A~~aie~~d~~~k~~~i~KA~~Ii~eL~~sLd~e-geiA~nL~~LY~y~~~~L~~Ani~~D~~~l 103 (145)
T 1vh6_A 25 LTLMLYNGCLKFIRLAAQAIENDDMERKNENLIKAQNIIQELNFTLNRN-IELSASMGAMYDYMYRRLVQANIKNDTGML 103 (145)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHTTHHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHcCCc-hHHHHHHHHHHHHHHHHHHHHHhhCCHHHH
Confidence 3444456666667778788889999888776666666543322222222 4444555555532 2466
Q ss_pred HHHHHHHHHHHHHHHHhcC
Q 012772 367 KEALAYCQLTIPVYQRVYP 385 (456)
Q Consensus 367 ~~A~~~~~~~l~~~e~~~g 385 (456)
+++..+...+.+.|+.+..
T Consensus 104 dev~~ll~~LreaW~~i~~ 122 (145)
T 1vh6_A 104 AEVEGYVTDFRDAWKQAIQ 122 (145)
T ss_dssp HHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 7788888888888877654
No 322
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=50.63 E-value=11 Score=26.79 Aligned_cols=30 Identities=20% Similarity=0.441 Sum_probs=20.3
Q ss_pred CCccccCCCCCCCcccCCCCCCeeeccCCCcC
Q 012772 265 EGYRCKDDGCSGFLLRDSDDKGFTCQQCGLVR 296 (456)
Q Consensus 265 ~~f~C~C~~C~~~~~~~~~~~~~~C~~C~~~~ 296 (456)
..|.| +.|...-..-.....|.|.+|+..+
T Consensus 25 ~ky~C--~fCgk~~vkR~a~GIW~C~~C~~~~ 54 (72)
T 3jyw_9 25 ARYDC--SFCGKKTVKRGAAGIWTCSCCKKTV 54 (72)
T ss_dssp SCBCC--SSCCSSCBSBCSSSCBCCSSSCCCC
T ss_pred cCccC--CCCCCceeEecCCCeEECCCCCCEE
Confidence 35666 6887543333446789999998764
No 323
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=49.90 E-value=49 Score=26.97 Aligned_cols=41 Identities=12% Similarity=0.108 Sum_probs=31.5
Q ss_pred HHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 012772 379 VYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVE 420 (456)
Q Consensus 379 ~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~ 420 (456)
++..+++ +.+.-+..+..+|.+|...|+..+|.+++.+|-+
T Consensus 113 i~~~~l~-n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~ 153 (172)
T 1wy6_A 113 IGREILK-NNEVSASILVAIANALRRVGDERDATTLLIEACK 153 (172)
T ss_dssp HHHHHC---CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHhc-cCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 3444444 5555677899999999999999999999999864
No 324
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=49.34 E-value=47 Score=24.90 Aligned_cols=52 Identities=23% Similarity=0.307 Sum_probs=35.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH----------HHHHhcCCCCchHHHHHHHHHHHHHHHHh
Q 012772 396 YTCGKLEWFLGDTENAIKSMTEAVE----------ILRITHGTNSPFMKELILKLEEAQAEASY 449 (456)
Q Consensus 396 ~~La~~~~~~g~~~eA~~~l~~Al~----------i~~~~~G~~h~~~~~~~~~l~~~~~e~~~ 449 (456)
..+|..+...|++++|..++-+|+. |++.++- -+....++.+|....+.+..
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL~i~q~TlP--~~Vf~~Li~~l~~~~~r~~~ 85 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQTLP--PPVFQMLLTKLPTISQRIVS 85 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHHHHHHSC--CHHHHHHHHHSCSHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHHhhCC--HHHHHHHHHHHHHHHhhccc
Confidence 3567888888999999998877664 5666652 24455566777766665544
No 325
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=48.78 E-value=41 Score=25.03 Aligned_cols=39 Identities=21% Similarity=0.064 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCC
Q 012772 391 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTN 429 (456)
Q Consensus 391 ~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~ 429 (456)
.|..+-..|..+...|+|++|++..++|...+...+-..
T Consensus 14 ~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eAmklt 52 (97)
T 2crb_A 14 LAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEAMKLT 52 (97)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 455666778888999999999999999998887766544
No 326
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=48.07 E-value=2.2 Score=30.41 Aligned_cols=26 Identities=27% Similarity=0.459 Sum_probs=17.3
Q ss_pred CCCCCCCcccCCCCCCeeeccCCCcCCH
Q 012772 271 DDGCSGFLLRDSDDKGFTCQQCGLVRSK 298 (456)
Q Consensus 271 C~~C~~~~~~~~~~~~~~C~~C~~~~~~ 298 (456)
|+ |............-+|+ ||..+..
T Consensus 7 C~-C~~~~~~~~~~kT~~C~-CG~~~~~ 32 (71)
T 1gh9_A 7 CD-CGRALYSREGAKTRKCV-CGRTVNV 32 (71)
T ss_dssp ET-TSCCEEEETTCSEEEET-TTEEEEC
T ss_pred CC-CCCEEEEcCCCcEEECC-CCCeeee
Confidence 46 88765555555556899 9986543
No 327
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=47.98 E-value=87 Score=32.58 Aligned_cols=20 Identities=10% Similarity=-0.076 Sum_probs=12.8
Q ss_pred HHhhhhcCChHHHHHHHHHH
Q 012772 315 TLALTSCGNHQEVVSTYKMI 334 (456)
Q Consensus 315 a~~~~~~g~~~~a~~~~~~~ 334 (456)
|..+..+|+++.|++.|.++
T Consensus 688 a~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 688 GDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHc
Confidence 33445667777777777664
No 328
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=47.86 E-value=1.1e+02 Score=26.00 Aligned_cols=68 Identities=12% Similarity=-0.072 Sum_probs=45.5
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHH--H--------HHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 012772 353 REKLIKILMELEDWKEALAYCQLTIPV--Y--------QRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVE 420 (456)
Q Consensus 353 ~~~L~~~~~~~g~~~~A~~~~~~~l~~--~--------e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~ 420 (456)
.+-=+-.|-...+|..|+...+.++.. - -..+=-+--+.-.-+.-+|.++...|+.+||+.++.....
T Consensus 65 ~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~ 142 (242)
T 3kae_A 65 KYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFG 142 (242)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcC
Confidence 333445677889999999998888721 1 0011111122334566779999999999999999987655
No 329
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=46.27 E-value=1.9e+02 Score=26.97 Aligned_cols=105 Identities=16% Similarity=0.120 Sum_probs=0.0
Q ss_pred CCCCccHHHHHH-HHHHHHHHccCHHHHHHHHH-------------HHHHHHHHhcC--CCCh-----------------
Q 012772 343 HPFSVNLMQTRE-KLIKILMELEDWKEALAYCQ-------------LTIPVYQRVYP--QFHP----------------- 389 (456)
Q Consensus 343 ~p~h~~~~~~~~-~L~~~~~~~g~~~~A~~~~~-------------~~l~~~e~~~g--~~hp----------------- 389 (456)
||..+.-..+.+ .++.-+...|.|+.|.++.. ..+++|....- +.-|
T Consensus 20 ~~~~~~~~W~~nS~laadhvAAGsFetAm~lLnrQvGivnf~PLk~~F~~~y~~s~~~l~~~~~~lp~l~~~~~r~~~e~ 99 (325)
T 3mv2_A 20 GPHMETAIWIKNSKLPAVLVAAGAFDAAVQALSKQVGVVKLEPLKKYFTNIYEGCRTYIPSTPCELPAQLGYVRAYDDTV 99 (325)
T ss_dssp -CCHHHHHHHHHCCSHHHHHHTTCHHHHHHHHHHHHCBCCCGGGHHHHHHHHHHTEEEECCSSTTSCCEEEECBSSCSSS
T ss_pred CCCcHHHHHHHcCCcHHHHHHccCHHHHHHHHHHHhCccCchhhHHHHHHHHHHHhhhcccCCCCCCcchhhhcCCcccc
Q ss_pred ------------HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHH
Q 012772 390 ------------LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEA 447 (456)
Q Consensus 390 ------------~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~e~ 447 (456)
.......+.|.-+...|++++|+..++.++-.+-..--.+.....++...+..++.-+
T Consensus 100 ~~~~~lP~i~~l~~L~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYi 169 (325)
T 3mv2_A 100 SEDQILPYVPGLDVVNEKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYI 169 (325)
T ss_dssp CGGGCCBCCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHH
No 330
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=46.25 E-value=8.6 Score=25.78 Aligned_cols=25 Identities=16% Similarity=0.507 Sum_probs=17.2
Q ss_pred CCCCCCCcccCCCCCCeeeccCCCc
Q 012772 271 DDGCSGFLLRDSDDKGFTCQQCGLV 295 (456)
Q Consensus 271 C~~C~~~~~~~~~~~~~~C~~C~~~ 295 (456)
|++|...+......+.|.|.+||.+
T Consensus 21 CPkCG~~~~ma~~~dr~~C~kCgyt 45 (55)
T 2k4x_A 21 CPRCGPGVFLAEHADRYSCGRCGYT 45 (55)
T ss_dssp CTTTTTTCCCEECSSEEECTTTCCC
T ss_pred CcCCCCceeEeccCCEEECCCCCCE
Confidence 5689875543333468999999864
No 331
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=45.94 E-value=9.8 Score=25.77 Aligned_cols=27 Identities=26% Similarity=0.519 Sum_probs=20.1
Q ss_pred CCCCCC-CcccCCCCCCeeeccCCCcCC
Q 012772 271 DDGCSG-FLLRDSDDKGFTCQQCGLVRS 297 (456)
Q Consensus 271 C~~C~~-~~~~~~~~~~~~C~~C~~~~~ 297 (456)
|+.|.+ .+..+.....+.|..||..+.
T Consensus 14 Cp~C~~~~lv~D~~~ge~vC~~CGlVl~ 41 (58)
T 1dl6_A 14 CPNHPDAILVEDYRAGDMICPECGLVVG 41 (58)
T ss_dssp BTTBSSSCCEECSSSCCEECTTTCCEEC
T ss_pred CcCCCCCceeEeCCCCeEEeCCCCCEEe
Confidence 678876 455566667899999997654
No 332
>3iqc_A FLIS, flagellar protein; chaperone, flagellum; 2.70A {Helicobacter pylori} SCOP: a.24.19.0 PDB: 3k1i_A
Probab=44.68 E-value=1.2e+02 Score=24.16 Aligned_cols=90 Identities=6% Similarity=0.047 Sum_probs=58.2
Q ss_pred CHHHH-HHHHHHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccH-HHHHHHHHHHHHHc-----------
Q 012772 297 SKEEI-KKIASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNL-MQTREKLIKILMEL----------- 363 (456)
Q Consensus 297 ~~~~~-~~~~~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~-~~~~~~L~~~~~~~----------- 363 (456)
++.++ .-+.+.+-..+..|....++|++++.-....++..+.......-+... ..+..+|..+|..+
T Consensus 24 sP~~Li~mLydgal~~l~~A~~ai~~~d~~~k~~~i~KA~~Ii~~L~~sLd~e~GgeiA~nL~~LY~y~~~~L~~An~~~ 103 (131)
T 3iqc_A 24 SPAKLIEMLYEGILRFSSQAKRCIENEDIEKKIYYINRVTDIFTELLNILDYEKGGEVAVYLTGLYTHQIKVLTQANVEN 103 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTBCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCccccHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 45444 344566667777888888899999887777777776554433334443 35555666665432
Q ss_pred --cCHHHHHHHHHHHHHHHHHhcCC
Q 012772 364 --EDWKEALAYCQLTIPVYQRVYPQ 386 (456)
Q Consensus 364 --g~~~~A~~~~~~~l~~~e~~~g~ 386 (456)
..++++..+...+.+.|+.+-+.
T Consensus 104 d~~~l~ev~~ll~~lr~aW~~i~~~ 128 (131)
T 3iqc_A 104 DASKIDLVLNVARGLLEAWREIHSD 128 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35677777777777777766543
No 333
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=43.62 E-value=17 Score=25.84 Aligned_cols=28 Identities=32% Similarity=0.735 Sum_probs=21.6
Q ss_pred CCCCccCcCcCCCCC--CccCcCCCCcccccH
Q 012772 24 SSSISRCDGCFASSN--LKKCSACQVVWYCGS 53 (456)
Q Consensus 24 ~~~~~~C~~C~~~~~--~~~C~~C~~v~yCs~ 53 (456)
......|+.|-+... .+.| .|+. .||+.
T Consensus 22 k~~~~RC~~C~kkvgL~~f~C-rCg~-~FCs~ 51 (74)
T 1wfp_A 22 KSTATRCLSCNKKVGVTGFKC-RCGS-TFCGT 51 (74)
T ss_dssp TCCCCBCSSSCCBCTTTCEEC-TTSC-EECTT
T ss_pred cccCccchhhcCcccccceEe-ccCC-Eeccc
Confidence 335689999998854 4789 7999 59974
No 334
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=43.37 E-value=77 Score=29.97 Aligned_cols=85 Identities=8% Similarity=-0.002 Sum_probs=51.5
Q ss_pred cC-ChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHc-c-CHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 012772 321 CG-NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL-E-DWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYT 397 (456)
Q Consensus 321 ~g-~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~-g-~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~ 397 (456)
.| .++++++.+..++. ..|.++. +.+.-..++..+ + +++++++++.+++. .+|.--...+.
T Consensus 101 l~~~l~eEL~~~~~~L~-----~nPKny~---aW~hR~wlL~~l~~~~~~~EL~~~~k~L~--------~dpkNy~AW~~ 164 (349)
T 3q7a_A 101 LNKSLEDELRLMNEFAV-----QNLKSYQ---VWHHRLLLLDRISPQDPVSEIEYIHGSLL--------PDPKNYHTWAY 164 (349)
T ss_dssp TTCCHHHHHHHHHHHHH-----TTCCCHH---HHHHHHHHHHHHCCSCCHHHHHHHHHHTS--------SCTTCHHHHHH
T ss_pred hhhhHHHHHHHHHHHHH-----hCCCcHH---HHHHHHHHHHHhcCCChHHHHHHHHHHHH--------hCCCCHHHHHH
Confidence 45 48888888877763 3455544 444444555555 6 78888888888774 23333334444
Q ss_pred HHHHHHHcCCHH--------HHHHHHHHHHHH
Q 012772 398 CGKLEWFLGDTE--------NAIKSMTEAVEI 421 (456)
Q Consensus 398 La~~~~~~g~~~--------eA~~~l~~Al~i 421 (456)
-+-+....|.++ ++++++.+++++
T Consensus 165 R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~ 196 (349)
T 3q7a_A 165 LHWLYSHFSTLGRISEAQWGSELDWCNEMLRV 196 (349)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccccccchhhHHHHHHHHHHHHHh
Confidence 444444444454 788888877764
No 335
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=42.93 E-value=13 Score=26.23 Aligned_cols=25 Identities=24% Similarity=0.335 Sum_probs=19.8
Q ss_pred CCCCCCCcccCCCCCCeeeccCCCc
Q 012772 271 DDGCSGFLLRDSDDKGFTCQQCGLV 295 (456)
Q Consensus 271 C~~C~~~~~~~~~~~~~~C~~C~~~ 295 (456)
|+.|.+.+..........|+.||..
T Consensus 11 CP~ck~~L~~~~~~~~LiC~~cg~~ 35 (69)
T 2pk7_A 11 CPICKGPLKLSADKTELISKGAGLA 35 (69)
T ss_dssp CTTTCCCCEECTTSSEEEETTTTEE
T ss_pred CCCCCCcCeEeCCCCEEEcCCCCcE
Confidence 5799998877666667899999864
No 336
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=42.66 E-value=66 Score=35.80 Aligned_cols=98 Identities=15% Similarity=-0.008 Sum_probs=68.0
Q ss_pred HHHhhhhcCChHHHHHHHHHHHHH-------------HHh--hcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 012772 314 KTLALTSCGNHQEVVSTYKMIEKL-------------QKK--LYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIP 378 (456)
Q Consensus 314 ~a~~~~~~g~~~~a~~~~~~~~~~-------------~~~--~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~ 378 (456)
.|..+...|++++|.+.++++... ... ...+.+..+...+..++.++-+.+.++.++++.+.++.
T Consensus 848 ~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~ 927 (1139)
T 4fhn_B 848 KALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADA 927 (1139)
T ss_dssp HHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 455566789999999988775210 000 11222334556677888888899999999999999986
Q ss_pred HHHHhcCCCChH-HHHHHHHHHHHHHHcCCHHHHHHHH
Q 012772 379 VYQRVYPQFHPL-LGLQYYTCGKLEWFLGDTENAIKSM 415 (456)
Q Consensus 379 ~~e~~~g~~hp~-~~~~l~~La~~~~~~g~~~eA~~~l 415 (456)
. .+.+.+. ....+.++=+.+...|+|++|-..+
T Consensus 928 ~----~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL 961 (1139)
T 4fhn_B 928 S----KETDDEDLSIAITHETLKTACAAGKFDAAHVAL 961 (1139)
T ss_dssp H----CCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHH
T ss_pred h----ccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 3 4444443 4446778888899999999886665
No 337
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=42.55 E-value=93 Score=22.43 Aligned_cols=34 Identities=15% Similarity=0.024 Sum_probs=25.5
Q ss_pred HHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhh
Q 012772 308 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKL 341 (456)
Q Consensus 308 ~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~ 341 (456)
...+...|......|++++|+.+|..+++.....
T Consensus 13 A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~a 46 (85)
T 2v6x_A 13 GIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLA 46 (85)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 3445556666667899999999999998876554
No 338
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=42.29 E-value=1.4e+02 Score=24.26 Aligned_cols=71 Identities=15% Similarity=0.051 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHc-CC--HHHHHHHHHHHHHHHHHhc
Q 012772 350 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFL-GD--TENAIKSMTEAVEILRITH 426 (456)
Q Consensus 350 ~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~-g~--~~eA~~~l~~Al~i~~~~~ 426 (456)
+..+...|..|..-|+.+.|--++.+.+.++.++ +.||+.-..--. +... |+ ...+++-+++-...+..-|
T Consensus 42 a~~L~r~A~~y~~EGd~E~AYilymRy~~L~~kI--pkHpdyk~~~~~----~k~~l~k~~~~~vl~~lE~LK~~L~~rY 115 (144)
T 2a9u_A 42 ALKIFKTAEECRLDRDEERAYVLYMKYVTVYNLI--KKRPDFKQQQDY----FHSILGPGNIKKAVEEAERLSESLKLRY 115 (144)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TTSHHHHHTHHH----HHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH--hcCcchhhhhHH----HHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 3344555788999999999999999999988655 789887653311 1111 22 3345555555555555554
No 339
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=41.34 E-value=1.4e+02 Score=24.16 Aligned_cols=44 Identities=16% Similarity=0.162 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHH
Q 012772 390 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKE 435 (456)
Q Consensus 390 ~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~ 435 (456)
.+|..++..|.+|...|+.+.|--+|-+-..++... +.||....
T Consensus 40 rsa~~L~r~A~~y~~EGd~E~AYilymRy~~L~~kI--pkHpdyk~ 83 (144)
T 2a9u_A 40 HSALKIFKTAEECRLDRDEERAYVLYMKYVTVYNLI--KKRPDFKQ 83 (144)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TTSHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH--hcCcchhh
Confidence 456678888999999999999999999999998544 68887753
No 340
>1orj_A Flagellar protein FLIS; flagellin, flagellar export, chaperone, flagellum, four HELI; 2.25A {Aquifex aeolicus} SCOP: a.24.19.1 PDB: 1ory_A
Probab=40.89 E-value=1.3e+02 Score=23.88 Aligned_cols=89 Identities=10% Similarity=0.049 Sum_probs=51.0
Q ss_pred CHHHH-HHHHHHHHHHHHHHHhhhhcCCh-HHH---HHHHHHHHHHHHhhcCCCCccH-HHHHHHHHHHHHHc-------
Q 012772 297 SKEEI-KKIASEVNILSKKTLALTSCGNH-QEV---VSTYKMIEKLQKKLYHPFSVNL-MQTREKLIKILMEL------- 363 (456)
Q Consensus 297 ~~~~~-~~~~~~~~~l~~~a~~~~~~g~~-~~a---~~~~~~~~~~~~~~l~p~h~~~-~~~~~~L~~~~~~~------- 363 (456)
++.++ .-+.+.+-..+..|....++|++ ++. -....++..+.......-+..- .++..+|..+|..+
T Consensus 17 sP~~Li~mLydgai~~l~~A~~ai~~~d~~~~k~~~~~~i~KA~~Ii~eL~~sLd~e~GgeiA~nL~~LY~y~~~~LAn~ 96 (130)
T 1orj_A 17 TPLEQIILLYDKAIECLERAIEIYDQVNELEKRKEFVENIDRVYDIISALKSFLDHEKGKEIAKNLDTIYTIILNTLVKV 96 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTGGGTTSHHHHHHHHHHHHHHHHHHHHHHHTCCTTTSHHHHHHHHHHHHHHHHHHHCT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCcHHHHHHHHHHHHHHHHHhcc
Confidence 34443 44456667777888888889999 777 5555566555433322223322 24444555554322
Q ss_pred ----cCHHHHHHHHHHHHHHHHHhcC
Q 012772 364 ----EDWKEALAYCQLTIPVYQRVYP 385 (456)
Q Consensus 364 ----g~~~~A~~~~~~~l~~~e~~~g 385 (456)
..++++..+...+.+.|+.+.+
T Consensus 97 ~~d~~~l~ev~~ll~~lreaW~~i~~ 122 (130)
T 1orj_A 97 DKTKEELQKILEILKDLREAWEEVKK 122 (130)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556667777766666666543
No 341
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=39.90 E-value=13 Score=26.01 Aligned_cols=25 Identities=12% Similarity=-0.029 Sum_probs=19.5
Q ss_pred CCCCCCCcccCCCCCCeeeccCCCc
Q 012772 271 DDGCSGFLLRDSDDKGFTCQQCGLV 295 (456)
Q Consensus 271 C~~C~~~~~~~~~~~~~~C~~C~~~ 295 (456)
|+.|.+++..........|+.|+..
T Consensus 13 CP~ck~~L~~~~~~g~LvC~~c~~~ 37 (67)
T 2jny_A 13 CPKDKGPLRYLESEQLLVNERLNLA 37 (67)
T ss_dssp CTTTCCBCEEETTTTEEEETTTTEE
T ss_pred CCCCCCcCeEeCCCCEEEcCCCCcc
Confidence 5799998877666667889999853
No 342
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=39.78 E-value=13 Score=26.09 Aligned_cols=26 Identities=23% Similarity=0.332 Sum_probs=20.1
Q ss_pred cCCCCCCCcccCCCCCCeeeccCCCc
Q 012772 270 KDDGCSGFLLRDSDDKGFTCQQCGLV 295 (456)
Q Consensus 270 ~C~~C~~~~~~~~~~~~~~C~~C~~~ 295 (456)
.|+.|.+.+..........|+.||..
T Consensus 10 ~CP~ck~~L~~~~~~~~LiC~~cg~~ 35 (68)
T 2hf1_A 10 VCPLCKGPLVFDKSKDELICKGDRLA 35 (68)
T ss_dssp BCTTTCCBCEEETTTTEEEETTTTEE
T ss_pred ECCCCCCcCeEeCCCCEEEcCCCCcE
Confidence 36799998876666667899999864
No 343
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=39.35 E-value=20 Score=24.70 Aligned_cols=27 Identities=30% Similarity=0.648 Sum_probs=21.1
Q ss_pred CCCccCcCcCCCCC--CccCcCCCCcccccH
Q 012772 25 SSISRCDGCFASSN--LKKCSACQVVWYCGS 53 (456)
Q Consensus 25 ~~~~~C~~C~~~~~--~~~C~~C~~v~yCs~ 53 (456)
.....|+.|-+... .+.| .|+. .||+.
T Consensus 13 ~~~~rC~~C~kkvgl~~f~C-rCg~-~FC~~ 41 (64)
T 1wfh_A 13 QRPNRCTVCRKRVGLTGFMC-RCGT-TFCGS 41 (64)
T ss_dssp SSCCCCTTTCCCCCTTCEEC-SSSC-EECTT
T ss_pred CcCCcChhhCCccCccCEEe-ecCC-Eeccc
Confidence 34689999999854 4689 6999 59974
No 344
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=39.23 E-value=19 Score=25.51 Aligned_cols=32 Identities=28% Similarity=0.724 Sum_probs=25.1
Q ss_pred CCCccCcCcCCCC--CCccCcCCCCcccccHHhhhh
Q 012772 25 SSISRCDGCFASS--NLKKCSACQVVWYCGSNCQKL 58 (456)
Q Consensus 25 ~~~~~C~~C~~~~--~~~~C~~C~~v~yCs~~C~~~ 58 (456)
...+.|++|.... ..++|..|++. |-+.|...
T Consensus 33 ~~pt~C~~C~~~l~~qG~kC~~C~~~--cHkkC~~~ 66 (72)
T 2fnf_X 33 GGPGWCDLCGREVLRQALRCANCKFT--CHSECRSL 66 (72)
T ss_dssp SSCCBCTTTSSBCSSCCEECTTSSCE--ECTGGGGG
T ss_pred CCCcchhhhhHHHHhCcCccCCCCCe--echhhhcc
Confidence 4578999998773 46789999995 88888753
No 345
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.02 E-value=20 Score=26.07 Aligned_cols=42 Identities=14% Similarity=0.238 Sum_probs=30.1
Q ss_pred CCceeecCCCCCCccCcCcCCCC-----CCccCcCCCCcccccHHhhhh
Q 012772 15 EPYVCVPNNSSSISRCDGCFASS-----NLKKCSACQVVWYCGSNCQKL 58 (456)
Q Consensus 15 ~P~~~~~~~~~~~~~C~~C~~~~-----~~~~C~~C~~v~yCs~~C~~~ 58 (456)
.+-.+.+..-...+.|++|-... .-+.|..|++. |-+.|...
T Consensus 16 ~~H~F~~~~~~~pt~C~~C~~~lwGl~kqg~~C~~C~~~--~Hk~C~~~ 62 (83)
T 2yuu_A 16 KNHEFIATFFGQPTFCSVCKDFVWGLNKQGYKCRQCNAA--IHKKCIDK 62 (83)
T ss_dssp GGCCEEEECCSSCCCCSSSCCCCCSSSCCEEEETTTCCE--ECTTGGGT
T ss_pred CCCceEeEeCCCCcChhhcChhhccccccccccCCcCCe--eChhhhhh
Confidence 44444444445679999998773 34789999995 88999764
No 346
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=38.23 E-value=13 Score=26.25 Aligned_cols=25 Identities=20% Similarity=0.266 Sum_probs=19.5
Q ss_pred CCCCCCCcccCCCCCCeeeccCCCc
Q 012772 271 DDGCSGFLLRDSDDKGFTCQQCGLV 295 (456)
Q Consensus 271 C~~C~~~~~~~~~~~~~~C~~C~~~ 295 (456)
|+.|.+.+..........|+.||..
T Consensus 11 CP~ck~~L~~~~~~~~LiC~~cg~~ 35 (70)
T 2js4_A 11 CPVCKGRLEFQRAQAELVCNADRLA 35 (70)
T ss_dssp CTTTCCBEEEETTTTEEEETTTTEE
T ss_pred CCCCCCcCEEeCCCCEEEcCCCCce
Confidence 5799998876666667889999864
No 347
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=38.18 E-value=14 Score=25.97 Aligned_cols=25 Identities=20% Similarity=0.109 Sum_probs=19.5
Q ss_pred CCCCCCCcccCCCCCCeeeccCCCc
Q 012772 271 DDGCSGFLLRDSDDKGFTCQQCGLV 295 (456)
Q Consensus 271 C~~C~~~~~~~~~~~~~~C~~C~~~ 295 (456)
|+.|.+.+..........|+.||..
T Consensus 11 CP~ck~~L~~~~~~~~LiC~~cg~~ 35 (68)
T 2jr6_A 11 CPVTKGRLEYHQDKQELWSRQAKLA 35 (68)
T ss_dssp CSSSCCBCEEETTTTEEEETTTTEE
T ss_pred CCCCCCcCeEeCCCCEEEcCCCCcE
Confidence 5799998876666667889999864
No 348
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=37.62 E-value=39 Score=24.12 Aligned_cols=29 Identities=24% Similarity=0.521 Sum_probs=18.2
Q ss_pred CCeeeccCCC-cCCHHHHHHHHHHHHHHHH
Q 012772 285 KGFTCQQCGL-VRSKEEIKKIASEVNILSK 313 (456)
Q Consensus 285 ~~~~C~~C~~-~~~~~~~~~~~~~~~~l~~ 313 (456)
.+|.|+.||. ..+.+..++..+.+..+..
T Consensus 35 p~~~C~~CGE~~~~~e~~~~~~~~~~~f~~ 64 (78)
T 3ga8_A 35 HGLYCVHCEESIMNKEESDAFMAQVKAFRA 64 (78)
T ss_dssp EEEEETTTCCEECCHHHHHHHHHHHHHHHH
T ss_pred eeEECCCCCCEEECHHHHHHHHHHHHHHHH
Confidence 4689999997 4566666554444444433
No 349
>2con_A RUH-035 protein, NIN one binding protein; ribosome, RNA binding protein, unknown function, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.15.1
Probab=37.13 E-value=15 Score=26.64 Aligned_cols=21 Identities=43% Similarity=0.941 Sum_probs=15.9
Q ss_pred CccCcCcCCC---CCCccCcCCCC
Q 012772 27 ISRCDGCFAS---SNLKKCSACQV 47 (456)
Q Consensus 27 ~~~C~~C~~~---~~~~~C~~C~~ 47 (456)
.-.|+.||+. .+..-||.|+-
T Consensus 15 iLrC~aCf~~t~~~~k~FCp~CGn 38 (79)
T 2con_A 15 ILRCHGCFKTTSDMNRVFCGHCGN 38 (79)
T ss_dssp EEECSSSCCEESCSSCCSCSSSCC
T ss_pred eeEecccceECCCcccccccccCc
Confidence 3679999987 24677888865
No 350
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=36.61 E-value=2.2e+02 Score=26.38 Aligned_cols=92 Identities=12% Similarity=0.013 Sum_probs=0.0
Q ss_pred HHHHHHHccCHHHHHHHHH-------------HHHHHHH-----------------------------HhcC--CCChHH
Q 012772 356 LIKILMELEDWKEALAYCQ-------------LTIPVYQ-----------------------------RVYP--QFHPLL 391 (456)
Q Consensus 356 L~~~~~~~g~~~~A~~~~~-------------~~l~~~e-----------------------------~~~g--~~hp~~ 391 (456)
++.-+...|.|+.|.++.. ..+.+|. ..+| +.....
T Consensus 22 laadhvaAGsFe~A~~lLnrQ~Givnf~PLk~~F~~~y~~s~~~l~~~~~~p~l~~~~~r~~~~~~~~~~lP~i~~~l~~ 101 (320)
T 3mkr_B 22 LPVDHILAGSFETAMRLLHDQVGVTQFGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLND 101 (320)
T ss_dssp CHHHHHHTTCHHHHHHHHHHHSCBCCCGGGHHHHHHHHTTSCEEECSSTTSCCEEECCBTTTTTCCSSSCCBCCCCCHHH
T ss_pred cHHHHHHccCHHHHHHHHHHHhCccCchhhHHHHHHHHHHHhhhccCCCCCCcchhhhcCCccccccccCCCCcccCHHH
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHH
Q 012772 392 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEA 447 (456)
Q Consensus 392 ~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~e~ 447 (456)
.....+.|.-+...|++++|+..++.++-.+-...-.+.....++...+..++.-+
T Consensus 102 l~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYi 157 (320)
T 3mkr_B 102 LIQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYI 157 (320)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHH
No 351
>1vdy_A Hypothetical protein (RAFL09-17-B18); structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} PDB: 2dcp_A
Probab=36.35 E-value=51 Score=26.68 Aligned_cols=73 Identities=4% Similarity=-0.139 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHc-CC-HHHHHHHH------------HHHHHHHHHhcCCCCchHH
Q 012772 369 ALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFL-GD-TENAIKSM------------TEAVEILRITHGTNSPFMK 434 (456)
Q Consensus 369 A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~-g~-~~eA~~~l------------~~Al~i~~~~~G~~h~~~~ 434 (456)
|.+-+.+-..+.+..--.+.|--|..+.++|+.-... ++ +.+.++++ -|||.+++...+..++.+.
T Consensus 6 ~~~~~~~~~~V~~ATs~d~~~~pgylm~EIA~~T~~s~~~~~~eim~~L~kRL~~k~~~vk~KaL~lL~yL~~~Gs~~f~ 85 (140)
T 1vdy_A 6 SGESYWRSRMIDAVTSDEDKVAPVYKLEEICDLLRSSHVSIVKEFSEFILKRLDNKSPIVKQKALRLIKYAVGKSGSEFR 85 (140)
T ss_dssp SCTHHHHHHHHHHTTCSCSSCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHhcchhHHHHHHHHHHHHhcCCCcceeehHHHHHHHHHHhCCHHHH
Confidence 4445556666677777778888899999998886553 12 24444443 3788999988877777665
Q ss_pred HH-HHHHH
Q 012772 435 EL-ILKLE 441 (456)
Q Consensus 435 ~~-~~~l~ 441 (456)
.- ..++.
T Consensus 86 ~~~r~~~~ 93 (140)
T 1vdy_A 86 REMQRNSV 93 (140)
T ss_dssp HHHHHTTH
T ss_pred HHHHHhHH
Confidence 53 34443
No 352
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=35.93 E-value=21 Score=24.63 Aligned_cols=26 Identities=35% Similarity=0.719 Sum_probs=20.7
Q ss_pred CCccCcCcCCCCC--CccCcCCCCcccccH
Q 012772 26 SISRCDGCFASSN--LKKCSACQVVWYCGS 53 (456)
Q Consensus 26 ~~~~C~~C~~~~~--~~~C~~C~~v~yCs~ 53 (456)
....|..|-+... ...| .|+. .||+.
T Consensus 14 ~~~rC~~C~kkvgl~~f~C-rCg~-~FC~~ 41 (64)
T 1wg2_A 14 PNNRCFSCNKKVGVMGFKC-KCGS-TFCGS 41 (64)
T ss_dssp CSCSCTTTCCCCTTSCEEC-TTSC-EECSS
T ss_pred cCCcChhhCCcccccCeEe-ecCC-Eeccc
Confidence 4679999999854 4789 8999 59974
No 353
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=35.19 E-value=1.8e+02 Score=23.71 Aligned_cols=46 Identities=11% Similarity=0.109 Sum_probs=33.9
Q ss_pred HHHHHHHhcC-CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 376 TIPVYQRVYP-QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 376 ~l~~~e~~~g-~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
..+++.-++. +-=...|..+-..|..+-..|++++|..+|+++++-
T Consensus 84 p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~ 130 (152)
T 4a1g_A 84 LHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQN 130 (152)
T ss_dssp HHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 3444444443 334556777888899999999999999999998774
No 354
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=35.06 E-value=21 Score=24.57 Aligned_cols=32 Identities=25% Similarity=0.464 Sum_probs=24.7
Q ss_pred CCCccCcCcCCCC-----CCccCcCCCCcccccHHhhhh
Q 012772 25 SSISRCDGCFASS-----NLKKCSACQVVWYCGSNCQKL 58 (456)
Q Consensus 25 ~~~~~C~~C~~~~-----~~~~C~~C~~v~yCs~~C~~~ 58 (456)
...+.|++|.... ....|..|++. |-+.|...
T Consensus 18 ~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~--~Hk~C~~~ 54 (65)
T 3uej_A 18 MSPTFCDHCGSLLWGLVKQGLKCEDCGMN--VHHKCREK 54 (65)
T ss_dssp SSCCBCTTTCCBCCSSSSCEEEETTTCCE--ECHHHHTT
T ss_pred CCCCcccccChhhhccCceeeECCCCCCe--EchhHhhh
Confidence 4678999998762 34789999985 88888754
No 355
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=34.63 E-value=1.4e+02 Score=22.19 Aligned_cols=37 Identities=11% Similarity=0.191 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcC
Q 012772 349 LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYP 385 (456)
Q Consensus 349 ~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g 385 (456)
.+......+..+...|+|++|++..+++.......+-
T Consensus 14 ~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eAmk 50 (97)
T 2crb_A 14 LAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEAMK 50 (97)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 4666677888899999999999999998876554443
No 356
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=34.11 E-value=71 Score=31.32 Aligned_cols=34 Identities=21% Similarity=0.245 Sum_probs=28.9
Q ss_pred CccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Q 012772 346 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPV 379 (456)
Q Consensus 346 h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~ 379 (456)
+.....+..-++.+|+.+|+|++|++++++++..
T Consensus 186 r~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 186 RMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred eecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 4555667778999999999999999999999875
No 357
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=33.74 E-value=36 Score=24.52 Aligned_cols=37 Identities=19% Similarity=0.240 Sum_probs=29.6
Q ss_pred HHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCC-ChHH
Q 012772 355 KLIKILMELEDWKEALAYCQLTIPVYQRVYPQF-HPLL 391 (456)
Q Consensus 355 ~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~-hp~~ 391 (456)
.+|.-|.-.|+|+.|+.||+.++....+....- .|..
T Consensus 17 k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~~~~d~~~ 54 (78)
T 2rpa_A 17 KLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTHL 54 (78)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTCSCHHH
T ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 566778888999999999999999888776643 4444
No 358
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=32.99 E-value=55 Score=24.44 Aligned_cols=64 Identities=13% Similarity=0.034 Sum_probs=43.4
Q ss_pred HHHHHccCHHHHHHHHHHHHHHHHHhcC-CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhc
Q 012772 358 KILMELEDWKEALAYCQLTIPVYQRVYP-QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITH 426 (456)
Q Consensus 358 ~~~~~~g~~~~A~~~~~~~l~~~e~~~g-~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~ 426 (456)
..+.+.|+|=+|-+..+.+- ...-+ ......|....-.|..+...|+. |..++.+|+..++..-
T Consensus 9 ~~lfn~g~~~eaHEvlE~~W---~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~~L~~~~ 73 (94)
T 2cwy_A 9 LGLWRAGRYYEVHEVLEPYW---LKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEARLEGLP 73 (94)
T ss_dssp HHHHHTTCHHHHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHTTCC
T ss_pred HHHHhCCChHHHHHHHHHHH---hhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHHHHHhCC
Confidence 34556699988888776654 32311 12334566666666666678888 9999999999998763
No 359
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=32.69 E-value=78 Score=23.35 Aligned_cols=32 Identities=16% Similarity=0.111 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHhhhhcCChHHHHHHHHHHHHH
Q 012772 306 SEVNILSKKTLALTSCGNHQEVVSTYKMIEKL 337 (456)
Q Consensus 306 ~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~ 337 (456)
..++.++.+|..+...|+|.+|..+++++...
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ 82 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNL 82 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHcc
Confidence 56788899999999999999999999888754
No 360
>2l8e_A Polyhomeotic-like protein 1; DNA binding protein; NMR {Homo sapiens}
Probab=32.67 E-value=18 Score=23.57 Aligned_cols=29 Identities=17% Similarity=0.405 Sum_probs=17.9
Q ss_pred ccCcCcCCCCCCccCcCCCCcccccHHhhhh
Q 012772 28 SRCDGCFASSNLKKCSACQVVWYCGSNCQKL 58 (456)
Q Consensus 28 ~~C~~C~~~~~~~~C~~C~~v~yCs~~C~~~ 58 (456)
.+|.+|.+...... .=+.-.|||..|++.
T Consensus 19 ~~C~~CG~~i~~~~--~~r~krFCS~sCR~~ 47 (49)
T 2l8e_A 19 LKCEYCGKYAPAEQ--FRGSKRFCSMTCAKR 47 (49)
T ss_dssp EECTTTCCEEEGGG--CTTTSSSCSHHHHHH
T ss_pred CcChhccCcccccc--CCCCCccCCHHHHhh
Confidence 56999988733211 111127999999864
No 361
>2ra1_A Surface layer protein; triple coiled-coil, S-layer protein, protein binding, sugar protein; 2.41A {Geobacillus stearothermophilus}
Probab=32.32 E-value=3.4e+02 Score=25.87 Aligned_cols=81 Identities=17% Similarity=0.181 Sum_probs=57.2
Q ss_pred HHccCHHHHHHHHHHHHH-------HHHHhcCCCChHHHHHHHHH-HH--------------------HHHHcCCHHHHH
Q 012772 361 MELEDWKEALAYCQLTIP-------VYQRVYPQFHPLLGLQYYTC-GK--------------------LEWFLGDTENAI 412 (456)
Q Consensus 361 ~~~g~~~~A~~~~~~~l~-------~~e~~~g~~hp~~~~~l~~L-a~--------------------~~~~~g~~~eA~ 412 (456)
+..|++++|.++|.++.- ++-++||..-+.....-|.. |+ .+...|++++|.
T Consensus 114 i~~~dl~~a~~~YHklsyeikk~avll~RVYG~stRe~il~~fk~pA~~l~~~~~y~Itv~~~~~~~~~a~~~g~l~~a~ 193 (412)
T 2ra1_A 114 VDAKDLKKAEELYHKISYELKTRTVILDRVYGQSTRELLRSTFKADAQALRDRLIYDITVAMKAREAQDAVKAGNLDKAK 193 (412)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHSTHHHHTSSCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred hhhccHHHHHHHhhhhhHhhhhcEEEEecccChhHHHHHHHHhhchHHHHHHHhhhHHHHHHHHHHHHHHhccCcHHHHH
Confidence 466899988888754331 45578998888877777776 32 233469999999
Q ss_pred HHHHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Q 012772 413 KSMTEAVEILRITHGTNSPFMKELILKLEEAQ 444 (456)
Q Consensus 413 ~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~ 444 (456)
..|..+-+-+... ...+..++...-+.+.
T Consensus 194 ~~l~~v~~~l~kv---~d~FkaeL~~aa~~a~ 222 (412)
T 2ra1_A 194 AALDQVNQYVSKV---TDAFKAELQKAAQDAK 222 (412)
T ss_dssp HHHHHHHHHGGGC---CSTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh---hHHHHHHHHHhhhhhh
Confidence 9999999998887 3446666665554443
No 362
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=32.26 E-value=27 Score=26.57 Aligned_cols=29 Identities=17% Similarity=0.523 Sum_probs=18.3
Q ss_pred CCccccCCCCCCCcccCCCCCCeeeccCCCc
Q 012772 265 EGYRCKDDGCSGFLLRDSDDKGFTCQQCGLV 295 (456)
Q Consensus 265 ~~f~C~C~~C~~~~~~~~~~~~~~C~~C~~~ 295 (456)
..|.| +.|...-..-.....|.|.+|+..
T Consensus 35 aky~C--pfCgk~~vKR~a~GIW~C~kCg~~ 63 (103)
T 4a17_Y 35 AKYGC--PFCGKVAVKRAAVGIWKCKPCKKI 63 (103)
T ss_dssp SCEEC--TTTCCEEEEEEETTEEEETTTTEE
T ss_pred cCCCC--CCCCCceeeecCcceEEcCCCCCE
Confidence 35666 688754222233567999999754
No 363
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=32.23 E-value=77 Score=31.12 Aligned_cols=34 Identities=21% Similarity=0.234 Sum_probs=28.9
Q ss_pred CccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Q 012772 346 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPV 379 (456)
Q Consensus 346 h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~ 379 (456)
+.....++.-+|.+|+.+|+|++|++++++++..
T Consensus 192 r~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 192 KVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp SCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred eeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 4555667778899999999999999999999874
No 364
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=32.11 E-value=12 Score=27.32 Aligned_cols=30 Identities=20% Similarity=0.472 Sum_probs=19.3
Q ss_pred CCccccCCCCCCCcccCCCCCCeeeccCCCcC
Q 012772 265 EGYRCKDDGCSGFLLRDSDDKGFTCQQCGLVR 296 (456)
Q Consensus 265 ~~f~C~C~~C~~~~~~~~~~~~~~C~~C~~~~ 296 (456)
..|.| +.|...-..-.....|.|.+|+..+
T Consensus 34 ~ky~C--pfCGk~~vkR~a~GIW~C~kCg~~~ 63 (83)
T 3j21_i 34 QKHTC--PVCGRKAVKRISTGIWQCQKCGATF 63 (83)
T ss_dssp SCBCC--SSSCSSCEEEEETTEEEETTTCCEE
T ss_pred cccCC--CCCCCceeEecCcCeEEcCCCCCEE
Confidence 35666 6887543222335679999998653
No 365
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=31.92 E-value=2e+02 Score=28.46 Aligned_cols=40 Identities=20% Similarity=0.138 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcC
Q 012772 367 KEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLG 406 (456)
Q Consensus 367 ~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g 406 (456)
++|++.+++++..++++-..+.|.....+.++++.|-..|
T Consensus 449 ~kAi~~Y~~Ai~~L~k~~~tdd~~~v~~~~~~ak~yE~aG 488 (526)
T 2wb7_A 449 QGAIDEYKAAINDLQKAAQQDDYQMFLNYLNAAKKHEMAG 488 (526)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHhhhhhhcc
Confidence 5788888888888888989999999999999998764433
No 366
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=31.01 E-value=18 Score=32.69 Aligned_cols=25 Identities=32% Similarity=0.861 Sum_probs=20.3
Q ss_pred CccCcCcCCCCC------------CccCcCCCCcccc
Q 012772 27 ISRCDGCFASSN------------LKKCSACQVVWYC 51 (456)
Q Consensus 27 ~~~C~~C~~~~~------------~~~C~~C~~v~yC 51 (456)
...|.+|+...| .+.||.|+-..|-
T Consensus 198 ~~~C~GC~~~lppq~~~~i~~~~~Iv~Cp~CgRIL~~ 234 (256)
T 3na7_A 198 KQACGGCFIRLNDKIYTEVLTSGDMITCPYCGRILYA 234 (256)
T ss_dssp TTBCTTTCCBCCHHHHHHHHHSSSCEECTTTCCEEEC
T ss_pred CCccCCCCeeeCHHHHHHHHCCCCEEECCCCCeeEEe
Confidence 578999998742 6899999888774
No 367
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=30.95 E-value=59 Score=28.04 Aligned_cols=33 Identities=21% Similarity=0.116 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 389 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 389 p~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
......+|-+|++++.+++|.+|.+.|.+|..-
T Consensus 11 ~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~ 43 (203)
T 3t5x_A 11 AQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEH 43 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 355678899999999999999999999999875
No 368
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=30.00 E-value=1.2e+02 Score=24.63 Aligned_cols=51 Identities=8% Similarity=0.010 Sum_probs=35.1
Q ss_pred hhcCChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Q 012772 319 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTI 377 (456)
Q Consensus 319 ~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l 377 (456)
..+|+-++..+++. .+++ +++.-...+..++.+|.+.|+..+|-++..++=
T Consensus 102 v~~~KkDqLdki~~-------~~l~-n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC 152 (172)
T 1wy6_A 102 VIQGKRDKLEEIGR-------EILK-NNEVSASILVAIANALRRVGDERDATTLLIEAC 152 (172)
T ss_dssp HHTTCHHHHHHHHH-------HHC---CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHhccHhHHHHHHH-------HHhc-cCCCChHHHHHHHHHHHHhcchhhHHHHHHHHH
Confidence 45677766555443 3334 454456777899999999999999999877653
No 369
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=29.91 E-value=15 Score=27.39 Aligned_cols=29 Identities=28% Similarity=0.697 Sum_probs=18.8
Q ss_pred CCccccCCCCCCCcccCCCCCCeeeccCCCc
Q 012772 265 EGYRCKDDGCSGFLLRDSDDKGFTCQQCGLV 295 (456)
Q Consensus 265 ~~f~C~C~~C~~~~~~~~~~~~~~C~~C~~~ 295 (456)
..|.| +.|...-..-.....|.|.+|+..
T Consensus 35 ~ky~C--pfCgk~~vkR~a~GIW~C~~Cg~~ 63 (92)
T 3iz5_m 35 SKYFC--EFCGKFAVKRKAVGIWGCKDCGKV 63 (92)
T ss_dssp SCBCC--TTTCSSCBEEEETTEEECSSSCCE
T ss_pred ccccC--cccCCCeeEecCcceEEcCCCCCE
Confidence 35765 688754322233567999999764
No 370
>1brv_A Protein G, BRSV-G region; attachment protein G of bovine respiratory syncytial virus, immunoglobulin-binding protein; NMR {Bovine respiratory syncytial virus} SCOP: j.33.1.1
Probab=29.36 E-value=19 Score=20.92 Aligned_cols=21 Identities=29% Similarity=0.488 Sum_probs=17.3
Q ss_pred CCCccCcCCCCcccccHHhhh
Q 012772 37 SNLKKCSACQVVWYCGSNCQK 57 (456)
Q Consensus 37 ~~~~~C~~C~~v~yCs~~C~~ 57 (456)
.+.+||+-|.--.-|..-||.
T Consensus 11 l~~VPCsiC~~N~~C~slCq~ 31 (32)
T 1brv_A 11 LPYVPCSTCEGNLACLSLCHI 31 (32)
T ss_pred cccccccccCCChhHHHHhhc
Confidence 578999999888888888874
No 371
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=28.65 E-value=1.7e+02 Score=21.59 Aligned_cols=70 Identities=13% Similarity=0.045 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhc---CChHHHHHHHHHHHHHHHh-hcCCCCccHHHHHHHHHHHHHHccCHHHHHHHH
Q 012772 298 KEEIKKIASEVNILSKKTLALTSC---GNHQEVVSTYKMIEKLQKK-LYHPFSVNLMQTREKLIKILMELEDWKEALAYC 373 (456)
Q Consensus 298 ~~~~~~~~~~~~~l~~~a~~~~~~---g~~~~a~~~~~~~~~~~~~-~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~ 373 (456)
...++......-..+..|-...+. |+.++|+++|++-+.-.++ +-=|..- .-..|+.|.++-
T Consensus 6 ~~~ik~~h~~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~eL~~Gi~V~~~g--------------~G~~we~Ar~LQ 71 (89)
T 3eab_A 6 AERVRVFHKQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTG--------------QGEQCERARRLQ 71 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHHHHHHHHHSCCCC--------------CSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHhhcCCccCC--------------CChhHHHHHHHH
Confidence 444555555555556666655555 8899999999886543332 2112111 223688888887
Q ss_pred HHHHHHHH
Q 012772 374 QLTIPVYQ 381 (456)
Q Consensus 374 ~~~l~~~e 381 (456)
.++...+.
T Consensus 72 ~KM~~nL~ 79 (89)
T 3eab_A 72 AKMMTNLV 79 (89)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77766543
No 372
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=28.54 E-value=67 Score=26.14 Aligned_cols=44 Identities=11% Similarity=0.038 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHH
Q 012772 390 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMK 434 (456)
Q Consensus 390 ~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~ 434 (456)
.+|..++..|.+|...|+.+.|--+|-++..++.... |.||.+.
T Consensus 38 rta~~llr~A~~y~~egd~e~AYily~R~~~L~~e~I-pkHpdy~ 81 (146)
T 2xze_A 38 RSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKL-PKHRDYK 81 (146)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTG-GGSTTTT
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHc-ccCccch
Confidence 3466777779999999999999999999999986443 2466553
No 373
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=28.43 E-value=42 Score=24.60 Aligned_cols=27 Identities=22% Similarity=0.533 Sum_probs=21.0
Q ss_pred CCCccCcCcCCCCC---CccCcCCCCcccccH
Q 012772 25 SSISRCDGCFASSN---LKKCSACQVVWYCGS 53 (456)
Q Consensus 25 ~~~~~C~~C~~~~~---~~~C~~C~~v~yCs~ 53 (456)
.....|+.|-+... .+.|. |+. .||+.
T Consensus 23 ~~~~rC~~C~kkvgl~~~f~Cr-Cg~-~FC~~ 52 (85)
T 1wff_A 23 KIMKHCFLCGKKTGLATSFECR-CGN-NFCAS 52 (85)
T ss_dssp CCCCBCSSSCCBCSSSSCEECT-TCC-EECTT
T ss_pred ccCccchhhCCeecccCCeEcC-CCC-Eeccc
Confidence 34689999999843 57895 999 59974
No 374
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=28.39 E-value=55 Score=23.22 Aligned_cols=25 Identities=24% Similarity=0.332 Sum_probs=20.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH
Q 012772 396 YTCGKLEWFLGDTENAIKSMTEAVE 420 (456)
Q Consensus 396 ~~La~~~~~~g~~~eA~~~l~~Al~ 420 (456)
..+|..+...|++++|..++-+|+.
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~ 45 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIA 45 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 4568888889999999998888876
No 375
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=28.22 E-value=84 Score=25.95 Aligned_cols=49 Identities=6% Similarity=0.052 Sum_probs=39.2
Q ss_pred CChHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 012772 322 GNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIP 378 (456)
Q Consensus 322 g~~~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~ 378 (456)
++.++|.+.|+.++.+ | ...+.+....|+.-+++|++..|.+...+++.
T Consensus 74 ~D~d~aR~vy~~a~~~-----h---KkFAKiwi~~AqFEiRqgnl~kARkILg~AiG 122 (161)
T 4h7y_A 74 QEPDDARDYFQMARAN-----C---KKFAFVHISFAQFELSQGNVKKSKQLLQKAVE 122 (161)
T ss_dssp HCGGGCHHHHHHHHHH-----C---TTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHH-----h---HHHHHHHHHHHHHHHHcccHHHHHHHHHHHhc
Confidence 5778888999988764 2 22377777777888889999999999999986
No 376
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=27.95 E-value=43 Score=22.46 Aligned_cols=32 Identities=28% Similarity=0.732 Sum_probs=24.9
Q ss_pred CCCccCcCcCCC--CCCccCcCCCCcccccHHhhhh
Q 012772 25 SSISRCDGCFAS--SNLKKCSACQVVWYCGSNCQKL 58 (456)
Q Consensus 25 ~~~~~C~~C~~~--~~~~~C~~C~~v~yCs~~C~~~ 58 (456)
...+.|++|... ....+|..|++. |-+.|...
T Consensus 20 ~~pt~C~~C~~~i~kqg~kC~~C~~~--cH~kC~~~ 53 (59)
T 1rfh_A 20 GGPGWCDLCGREVLRQALRCANCKFT--CHSECRSL 53 (59)
T ss_dssp SCCEECTTTCSEECSCCEECTTTSCE--ECHHHHTT
T ss_pred CCCeEchhcchhhhhCccEeCCCCCe--Eehhhhhh
Confidence 457899999776 346789999995 88888753
No 377
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.87 E-value=35 Score=23.80 Aligned_cols=26 Identities=31% Similarity=0.646 Sum_probs=21.0
Q ss_pred CCccCcCcCCCCCC-----ccCcCCCCcccccH
Q 012772 26 SISRCDGCFASSNL-----KKCSACQVVWYCGS 53 (456)
Q Consensus 26 ~~~~C~~C~~~~~~-----~~C~~C~~v~yCs~ 53 (456)
....|..|-+...+ ..| .|+. .||+.
T Consensus 14 ~~~rC~~C~kk~gL~~~egf~C-rCg~-~FC~~ 44 (67)
T 1x4w_A 14 SRRRCFQCQTKLELVQQELGSC-RCGY-VFCML 44 (67)
T ss_dssp CTTBCSSSCCBCCHHHHHHHCC-SSSC-CCCTT
T ss_pred cCCcchhhCCeecccccCceEe-cCCC-Eehhc
Confidence 35899999999654 589 9999 59974
No 378
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=27.38 E-value=26 Score=22.37 Aligned_cols=31 Identities=26% Similarity=0.494 Sum_probs=24.1
Q ss_pred CCccCcCcCCCC-----CCccCcCCCCcccccHHhhhh
Q 012772 26 SISRCDGCFASS-----NLKKCSACQVVWYCGSNCQKL 58 (456)
Q Consensus 26 ~~~~C~~C~~~~-----~~~~C~~C~~v~yCs~~C~~~ 58 (456)
..+.|++|.... ...+|..|++. |-+.|...
T Consensus 10 ~pt~C~~C~~~l~g~~~qg~~C~~C~~~--~H~~C~~~ 45 (50)
T 1ptq_A 10 SPTFCDHCGSLLWGLVKQGLKCEDCGMN--VHHKCREK 45 (50)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTCCE--ECHHHHTT
T ss_pred CCCCcCCCCceeeccCCccCEeCCCCCe--ECHHHhhh
Confidence 568899998762 34789999985 88888754
No 379
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=27.35 E-value=20 Score=23.29 Aligned_cols=31 Identities=23% Similarity=0.472 Sum_probs=24.2
Q ss_pred CCccCcCcCCC-CCCccCcCCCCcccccHHhhhh
Q 012772 26 SISRCDGCFAS-SNLKKCSACQVVWYCGSNCQKL 58 (456)
Q Consensus 26 ~~~~C~~C~~~-~~~~~C~~C~~v~yCs~~C~~~ 58 (456)
..+.|++|.+. .....|..|++. |-+.|...
T Consensus 13 ~pt~C~~C~~~l~qG~~C~~C~~~--~H~~C~~~ 44 (52)
T 1faq_A 13 KLAFCDICQKFLLNGFRCQTCGYK--FHEHCSTK 44 (52)
T ss_dssp SCEECTTSSSEECSEEECTTTTCC--BCSTTSSS
T ss_pred CCcCCCCcccccccCCEeCCCCCe--EChhHHhh
Confidence 46899999876 456789999985 77888654
No 380
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=27.15 E-value=32 Score=24.24 Aligned_cols=26 Identities=15% Similarity=0.501 Sum_probs=19.3
Q ss_pred CCCccCcCcCCC-----CCCccCcCCCC-ccc
Q 012772 25 SSISRCDGCFAS-----SNLKKCSACQV-VWY 50 (456)
Q Consensus 25 ~~~~~C~~C~~~-----~~~~~C~~C~~-v~y 50 (456)
...-.|..|... ...++|+.|+. +.|
T Consensus 26 ~v~Y~C~~CG~~~e~~~~d~irCp~CG~RILy 57 (70)
T 1twf_L 26 TLKYICAECSSKLSLSRTDAVRCKDCGHRILL 57 (70)
T ss_dssp CCCEECSSSCCEECCCTTSTTCCSSSCCCCCB
T ss_pred eEEEECCCCCCcceeCCCCCccCCCCCceEeE
Confidence 345689999887 24689999987 544
No 381
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=26.68 E-value=2.5e+02 Score=26.69 Aligned_cols=72 Identities=13% Similarity=0.035 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh-cCCCChHHHHHHHHHHH
Q 012772 326 EVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRV-YPQFHPLLGLQYYTCGK 400 (456)
Q Consensus 326 ~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~-~g~~hp~~~~~l~~La~ 400 (456)
.++.+|.+++...+..++..|.+- +.-++.-+.+.+++.+|+.....+-.+.... |..+.-++=..++++|.
T Consensus 275 ~~l~L~~~AI~sa~~yY~n~HvYP---YtylgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eIAn 347 (472)
T 3re2_A 275 PAEELFKEAITVAKREYSDHHIYP---YTYLGGYYYRKKKYYEAIASWVDAGYVAGKYNYSKDDEEMYKEFHEIAN 347 (472)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHH---HHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCccc---hhhhhhhhhhcchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHH
Confidence 478899999988888888777543 3456778888999999999988777765543 44555555555555554
No 382
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=26.62 E-value=17 Score=27.05 Aligned_cols=29 Identities=21% Similarity=0.479 Sum_probs=18.5
Q ss_pred CCccccCCCCCCCcccCCCCCCeeeccCCCc
Q 012772 265 EGYRCKDDGCSGFLLRDSDDKGFTCQQCGLV 295 (456)
Q Consensus 265 ~~f~C~C~~C~~~~~~~~~~~~~~C~~C~~~ 295 (456)
..|.| +.|...-..-.....|.|.+|+..
T Consensus 35 ~ky~C--pfCgk~~vkR~a~GIW~C~~C~~~ 63 (92)
T 3izc_m 35 ARYDC--SFCGKKTVKRGAAGIWTCSCCKKT 63 (92)
T ss_dssp SCCCC--SSSCSSCCEEEETTEEECTTTCCE
T ss_pred cCCcC--CCCCCceeeecccceEEcCCCCCE
Confidence 35766 588754222233567999999754
No 383
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=26.56 E-value=44 Score=22.85 Aligned_cols=38 Identities=26% Similarity=0.372 Sum_probs=27.1
Q ss_pred eecCCCCCCccCcCcCCCC-----CCccCcCCCCcccccHHhhhh
Q 012772 19 CVPNNSSSISRCDGCFASS-----NLKKCSACQVVWYCGSNCQKL 58 (456)
Q Consensus 19 ~~~~~~~~~~~C~~C~~~~-----~~~~C~~C~~v~yCs~~C~~~ 58 (456)
..+..-...+.|++|.... .-++|..|++. |-+.|...
T Consensus 15 F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~--~Hk~C~~~ 57 (65)
T 2enz_A 15 FKVYNYKSPTFCEHCGTLLWGLARQGLKCDACGMN--VHHRCQTK 57 (65)
T ss_dssp EEECCCCSCCBCSSSCCBCCCSSSCSEEESSSCCE--ECTTTTTT
T ss_pred cEeEcCCCCcCchhcChhheecCCcccccCCCCCc--cCHhHHhh
Confidence 3333334679999998762 35789999985 88888754
No 384
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.53 E-value=2.3e+02 Score=22.02 Aligned_cols=43 Identities=16% Similarity=0.132 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHh
Q 012772 298 KEEIKKIASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKK 340 (456)
Q Consensus 298 ~~~~~~~~~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~ 340 (456)
...++....+.-..+..|-...+.|+.++|+++|++-+.-.++
T Consensus 12 l~~ik~~h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~ 54 (116)
T 2dl1_A 12 IKIIREAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLR 54 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHH
Confidence 4556666777777788888888889999999999887655443
No 385
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=26.38 E-value=21 Score=24.39 Aligned_cols=31 Identities=26% Similarity=0.501 Sum_probs=24.3
Q ss_pred CCccCcCcCCCC----CCccCcCCCCcccccHHhhhh
Q 012772 26 SISRCDGCFASS----NLKKCSACQVVWYCGSNCQKL 58 (456)
Q Consensus 26 ~~~~C~~C~~~~----~~~~C~~C~~v~yCs~~C~~~ 58 (456)
....|+.|.... ..++|..|+.+ |-++|...
T Consensus 18 ~~~~C~~Cg~~i~~gkq~~kC~dC~~~--cH~~C~~~ 52 (61)
T 4b6d_A 18 KPESCVPCGKRIKFGKLSLKCRDCRVV--SHPECRDR 52 (61)
T ss_dssp SCEECTTTCCEECTTCEEEEESSSSCE--ECGGGGGG
T ss_pred CCcccccccCEEEEeeEeeECCCCCCe--EchhHhhc
Confidence 468999997763 24789999996 88999754
No 386
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=26.07 E-value=48 Score=22.80 Aligned_cols=24 Identities=25% Similarity=0.624 Sum_probs=18.3
Q ss_pred CCCCccCcCcCCCC-----CCccCcCCCC
Q 012772 24 SSSISRCDGCFASS-----NLKKCSACQV 47 (456)
Q Consensus 24 ~~~~~~C~~C~~~~-----~~~~C~~C~~ 47 (456)
+...-.|..|.... ..++|+.|+.
T Consensus 18 ~~v~Y~C~~Cg~~~~l~~~~~iRC~~CG~ 46 (63)
T 3h0g_L 18 ATMIYLCADCGARNTIQAKEVIRCRECGH 46 (63)
T ss_dssp -CCCCBCSSSCCBCCCCSSSCCCCSSSCC
T ss_pred CCeEEECCCCCCeeecCCCCceECCCCCc
Confidence 34678899998873 4689999976
No 387
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=25.81 E-value=15 Score=28.69 Aligned_cols=29 Identities=17% Similarity=0.414 Sum_probs=18.2
Q ss_pred CCccccCCCCCCCcccCCCCCCeeeccCCCc
Q 012772 265 EGYRCKDDGCSGFLLRDSDDKGFTCQQCGLV 295 (456)
Q Consensus 265 ~~f~C~C~~C~~~~~~~~~~~~~~C~~C~~~ 295 (456)
..|.| +.|...-..-.....|.|..|+..
T Consensus 59 akytC--PfCGk~~vKR~avGIW~C~~Cgk~ 87 (116)
T 3cc2_Z 59 EDHAC--PNCGEDRVDRQGTGIWQCSYCDYK 87 (116)
T ss_dssp SCEEC--SSSCCEEEEEEETTEEEETTTCCE
T ss_pred cCCcC--CCCCCceeEecCceeEECCCCCCE
Confidence 35766 588753222223467999999865
No 388
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=25.71 E-value=41 Score=21.51 Aligned_cols=19 Identities=26% Similarity=0.761 Sum_probs=14.1
Q ss_pred cCcCcCCCC--------CCccCcCCCC
Q 012772 29 RCDGCFASS--------NLKKCSACQV 47 (456)
Q Consensus 29 ~C~~C~~~~--------~~~~C~~C~~ 47 (456)
.|.-|.+.. +.++||-|++
T Consensus 5 ~C~rCg~~fs~~el~~lP~IrCpyCGy 31 (48)
T 4ayb_P 5 RCGKCWKTFTDEQLKVLPGVRCPYCGY 31 (48)
T ss_dssp CCCCTTTTCCCCCSCCCSSSCCTTTCC
T ss_pred EeeccCCCccHHHHhhCCCcccCccCc
Confidence 577777652 4689999987
No 389
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=25.70 E-value=60 Score=23.69 Aligned_cols=32 Identities=16% Similarity=0.534 Sum_probs=25.1
Q ss_pred CCCCccCcCcCCC-C----C--CccCcCCCCcccccHHhhh
Q 012772 24 SSSISRCDGCFAS-S----N--LKKCSACQVVWYCGSNCQK 57 (456)
Q Consensus 24 ~~~~~~C~~C~~~-~----~--~~~C~~C~~v~yCs~~C~~ 57 (456)
-...+.|++|-.. . . .+.|..|++. |-+.|..
T Consensus 32 ~~~PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~--~HkrC~~ 70 (84)
T 2row_A 32 YHFPTNCEACMKPLWHMFKPPPALECRRCHIK--CHKDHMD 70 (84)
T ss_dssp CSSCEECSSSSSEECCSSSCCCEEEESSSCCE--EEHHHHH
T ss_pred CCCCcchhhcCHhhhccccCCCCCEecCCCCc--cchhHhC
Confidence 3467999999876 2 2 4679999986 9999986
No 390
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=25.23 E-value=1.8e+02 Score=29.81 Aligned_cols=58 Identities=10% Similarity=0.052 Sum_probs=44.6
Q ss_pred HHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 012772 355 KLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVE 420 (456)
Q Consensus 355 ~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~ 420 (456)
..+...+..|+|+.|..+..+ ++...+..+...|-+|+++..+|+.++|..+|+++..
T Consensus 290 ~~~r~Alr~~d~~~a~~~~~~--------l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 290 RRVRMALGTGDRRGLNTWLAR--------LPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHHHHHTCHHHHHHHHHH--------SCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCHHHHHHHHHH--------ccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 334444567999999998754 3344446777899999999999999999999998765
No 391
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=24.94 E-value=19 Score=25.69 Aligned_cols=29 Identities=24% Similarity=0.582 Sum_probs=17.9
Q ss_pred CccccCCCCCCCcccCCCCCCeeeccCCCcC
Q 012772 266 GYRCKDDGCSGFLLRDSDDKGFTCQQCGLVR 296 (456)
Q Consensus 266 ~f~C~C~~C~~~~~~~~~~~~~~C~~C~~~~ 296 (456)
.|.| +.|...-..-.....|.|.+|+..+
T Consensus 27 ky~C--~fCgk~~vkR~a~GIW~C~~C~~~~ 55 (73)
T 1ffk_W 27 KYKC--PVCGFPKLKRASTSIWVCGHCGYKI 55 (73)
T ss_pred CccC--CCCCCceeEEEEeEEEECCCCCcEE
Confidence 3655 5887532222234579999998764
No 392
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=24.93 E-value=87 Score=30.83 Aligned_cols=34 Identities=12% Similarity=0.243 Sum_probs=28.6
Q ss_pred CccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Q 012772 346 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPV 379 (456)
Q Consensus 346 h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~ 379 (456)
+.....++.-++.+|+.+|+|++|++++++++..
T Consensus 198 r~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 198 YINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 4455566778999999999999999999999864
No 393
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=24.68 E-value=3.4e+02 Score=26.56 Aligned_cols=45 Identities=18% Similarity=0.045 Sum_probs=20.4
Q ss_pred CHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 012772 365 DWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTE 417 (456)
Q Consensus 365 ~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~ 417 (456)
+.+.|...+++++.. +| ..|..- ...+......|+.+.|+.++++
T Consensus 335 d~~~ar~ife~al~~----~~-~~~~~~---~~yid~e~~~~~~~~aR~l~er 379 (493)
T 2uy1_A 335 SRATPYNIFSSGLLK----HP-DSTLLK---EEFFLFLLRIGDEENARALFKR 379 (493)
T ss_dssp CSHHHHHHHHHHHHH----CT-TCHHHH---HHHHHHHHHHTCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHH----CC-CCHHHH---HHHHHHHHHcCCHHHHHHHHHH
Confidence 456666666655542 22 234321 1223333445555555544444
No 394
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=24.68 E-value=38 Score=24.05 Aligned_cols=26 Identities=27% Similarity=0.607 Sum_probs=20.4
Q ss_pred CCccCcCcCCCCC--CccCcCCCCcccccH
Q 012772 26 SISRCDGCFASSN--LKKCSACQVVWYCGS 53 (456)
Q Consensus 26 ~~~~C~~C~~~~~--~~~C~~C~~v~yCs~ 53 (456)
...+|..|-+... ...|. |+. .||+.
T Consensus 24 ~~nRC~~CrKkvgL~gf~Cr-Cg~-~FCs~ 51 (74)
T 1wfl_A 24 KKNRCFMCRKKVGLTGFDCR-CGN-LFCGL 51 (74)
T ss_dssp CTTBCSSSCCBCGGGCEECT-TSC-EECSS
T ss_pred cCCcChhhCCcccccCeecC-CCC-Eechh
Confidence 3578999998843 47899 998 59974
No 395
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=24.62 E-value=3.5e+02 Score=23.59 Aligned_cols=97 Identities=8% Similarity=0.035 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCC---ccHHHHHHHHHHHHHHccCHHHHHHH----------HHHHHHHHHHhcC-CCChHH
Q 012772 326 EVVSTYKMIEKLQKKLYHPFS---VNLMQTREKLIKILMELEDWKEALAY----------CQLTIPVYQRVYP-QFHPLL 391 (456)
Q Consensus 326 ~a~~~~~~~~~~~~~~l~p~h---~~~~~~~~~L~~~~~~~g~~~~A~~~----------~~~~l~~~e~~~g-~~hp~~ 391 (456)
+.++.+-+-+.-.+..++..+ ..+..++......+....+|..=.+| +....++|.-++. +-=...
T Consensus 70 DPL~~w~~YIkW~ee~yP~g~~~~s~L~~lLErc~~~F~~~~rYknD~RyLklWl~Ya~~~~~p~~if~~L~~~~IG~~~ 149 (223)
T 4aez_C 70 DPLQVWIDYIKWTLDNFPQGETKTSGLVTLLERCTREFVRNPLYKDDVRYLRIWMQYVNYIDEPVELFSFLAHHHIGQES 149 (223)
T ss_dssp CTHHHHHHHHHHHHHHCTTCCCTTTCHHHHHHHHHHHTTTCGGGTTCHHHHHHHHHHHTTCSCHHHHHHHHHHTTCSTTB
T ss_pred CChHHHHHHHHHHHHhCcCCCcchhhHHHHHHHHHHHhcccccccCCHHHHHHHHHHHHccCCHHHHHHHHHHCCcchhH
Confidence 344444444444444454332 23556666665555444333221111 2233334443333 333455
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 012772 392 GLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 422 (456)
Q Consensus 392 ~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~ 422 (456)
+..|-..|..+-..|++.+|..+|+++++-.
T Consensus 150 AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~ 180 (223)
T 4aez_C 150 SIFYEEYANYFESRGLFQKADEVYQKGKRMK 180 (223)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 6777788999999999999999999988743
No 396
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=24.25 E-value=3.5e+02 Score=26.22 Aligned_cols=72 Identities=15% Similarity=0.085 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh-cCCCChHHHHHHHHHH
Q 012772 325 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRV-YPQFHPLLGLQYYTCG 399 (456)
Q Consensus 325 ~~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~-~g~~hp~~~~~l~~La 399 (456)
..++++|++++...++.+...|.+ -+.-++.-+.+.++|.+|++++..+-.+.... |..+.-.+=..+.+++
T Consensus 281 p~~~~Lf~~AI~~ar~~Y~~~hvY---PYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~~eIa 353 (489)
T 4gq4_A 281 PDPLTLYHKGIASAKTYYRDEHIY---PYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVA 353 (489)
T ss_dssp CCHHHHHHHHHHHHHHHSTTCCSH---HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcccCccc---ceeecchHHHHhhhHHHHHHHhhhhhhhhhhcccccchHHHHHHHHHHH
Confidence 356789999999888888777743 23456777778899999999998887765543 4455544444444444
No 397
>1wvo_A Sialic acid synthase; antifreeze protein like domain, N-acetylneuraminic acid phosphate synthase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.95 E-value=28 Score=25.09 Aligned_cols=19 Identities=26% Similarity=0.323 Sum_probs=16.0
Q ss_pred EEEEecCCCCCCcccCChh
Q 012772 240 VVRAVQHVPKGAEGQFDDI 258 (456)
Q Consensus 240 ~vra~~~I~~Gee~~~~~~ 258 (456)
.|+|.++|++|+.++-.++
T Consensus 8 slvA~rdI~~Gevit~~dl 26 (79)
T 1wvo_A 8 SVVAKVKIPEGTILTMDML 26 (79)
T ss_dssp EEEESSCBCTTCBCCGGGE
T ss_pred EEEEeCccCCCCCcCHHHe
Confidence 5789999999999886654
No 398
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=23.90 E-value=1.6e+02 Score=32.66 Aligned_cols=97 Identities=13% Similarity=-0.000 Sum_probs=61.3
Q ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHH-------------HHhcC--CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 012772 353 REKLIKILMELEDWKEALAYCQLTIPVY-------------QRVYP--QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTE 417 (456)
Q Consensus 353 ~~~L~~~~~~~g~~~~A~~~~~~~l~~~-------------e~~~g--~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~ 417 (456)
.+-+|.++...|++++|.++++++-... ..+.+ .........|+++..+.-..|.++.++++.+.
T Consensus 845 ~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~l 924 (1139)
T 4fhn_B 845 VYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLL 924 (1139)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 4778999999999999999998763211 00111 11222345678888888889999999999999
Q ss_pred HHHHHHHhcCCCCchH-HHHHHHHHHHHHHHHhhhcc
Q 012772 418 AVEILRITHGTNSPFM-KELILKLEEAQAEASYKLSS 453 (456)
Q Consensus 418 Al~i~~~~~G~~h~~~-~~~~~~l~~~~~e~~~~~~~ 453 (456)
|++. -+++.+.. .++..++=....++..+..|
T Consensus 925 Ai~~----~~~~~~~~~~~l~~~iFk~~L~l~~ye~A 957 (1139)
T 4fhn_B 925 ADAS----KETDDEDLSIAITHETLKTACAAGKFDAA 957 (1139)
T ss_dssp HHHH----CCSCCHHHHHHHHHHHHHHHHHHCCSGGG
T ss_pred HHHh----ccCCChhhHHHHHHHHHHHHHhhCCHHHH
Confidence 9874 23344332 23444444444444444443
No 399
>2yrc_A Protein transport protein SEC23A; zinc binding, copii, coat protein complex-II, endoplasmic reticulum, golgi, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yrd_A
Probab=23.58 E-value=29 Score=23.53 Aligned_cols=26 Identities=19% Similarity=0.209 Sum_probs=17.8
Q ss_pred cCCC--CCCCcccC----CCCCCeeeccCCCc
Q 012772 270 KDDG--CSGFLLRD----SDDKGFTCQQCGLV 295 (456)
Q Consensus 270 ~C~~--C~~~~~~~----~~~~~~~C~~C~~~ 295 (456)
.|.+ |..++.|- .....|+|.-|+..
T Consensus 11 RC~r~~CraylNP~~~~~~~~~~W~C~~C~~~ 42 (59)
T 2yrc_A 11 LCSRTTCRAVLNPLCQVDYRAKLWACNFCYQR 42 (59)
T ss_dssp BCSCTTTCCBCCTTSEEEGGGTEEECSSSCCE
T ss_pred ccCCCCCCeEECCceEEECCCCEEEcccCCCc
Confidence 3557 98877653 22457999999853
No 400
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=23.58 E-value=4.9e+02 Score=25.07 Aligned_cols=97 Identities=15% Similarity=0.093 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH------hcCCC-------ChH----------------------HHHH
Q 012772 350 MQTREKLIKILMELEDWKEALAYCQLTIPVYQR------VYPQF-------HPL----------------------LGLQ 394 (456)
Q Consensus 350 ~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~------~~g~~-------hp~----------------------~~~~ 394 (456)
..-++.|+......|+|.||......+..+.-. .++-+ .|. +-..
T Consensus 11 ~~wl~~La~~h~~~~n~~EAa~cl~~~aaliae~L~~~~~~~~~~~~f~~i~p~~~ee~~~~~d~g~~~~~fte~~l~~l 90 (428)
T 2wm9_A 11 KTWLDSMARIHVKNGDLSEAAMCYVHVTALVAEYLTRKGVFRQGCTAFRVITPNIDEEASMMEDVGMQDVHFNEDVLMEL 90 (428)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHTTSSSCCGGGGTTTCGGGGGGC---------CCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhcCCCccchhccccccCCCccccCHHHHHHH
Confidence 345578889999999999988877644332111 22211 111 0113
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHH
Q 012772 395 YYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEAS 448 (456)
Q Consensus 395 l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~G~~h~~~~~~~~~l~~~~~e~~ 448 (456)
+...+......+.++.|..+++..+.+++.. .|-....++...++.+...+.
T Consensus 91 l~~ai~~f~kg~~~E~ai~~~k~L~~~ye~~--~dy~~Ls~~~~~~a~~y~~I~ 142 (428)
T 2wm9_A 91 LEQCADGLWKAERYELIADIYKLIIPIYEKR--RDFERLAHLYDTLHRAYSKVT 142 (428)
T ss_dssp HHHHHHHHHHTTCGGGHHHHHTTTHHHHHHT--TCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHH
Confidence 3344445555667888999999999999886 355566777777777766664
No 401
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=23.53 E-value=2.9e+02 Score=22.24 Aligned_cols=46 Identities=11% Similarity=0.033 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhhcCCCCccH
Q 012772 303 KIASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNL 349 (456)
Q Consensus 303 ~~~~~~~~l~~~a~~~~~~g~~~~a~~~~~~~~~~~~~~l~p~h~~~ 349 (456)
.......+++..|..+...|+.+.|--+|-+...+....+ |.|++.
T Consensus 35 ~ylrta~~llr~A~~y~~egd~e~AYily~R~~~L~~e~I-pkHpdy 80 (146)
T 2xze_A 35 RYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKL-PKHRDY 80 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTG-GGSTTT
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHc-ccCccc
Confidence 3455567888999999999999999888888776654333 445543
No 402
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=23.43 E-value=1e+02 Score=30.12 Aligned_cols=36 Identities=6% Similarity=-0.082 Sum_probs=31.8
Q ss_pred CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 386 QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 386 ~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
..++..+..+--||++|+..|++++|.++.++++.-
T Consensus 184 ~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 184 NGRMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp TTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 357888888899999999999999999999988864
No 403
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=23.39 E-value=26 Score=26.29 Aligned_cols=43 Identities=21% Similarity=0.521 Sum_probs=30.7
Q ss_pred CccCcCcCCC-CCCccCcCCCCcccccHHhhhhcHHHhHHhchhhH
Q 012772 27 ISRCDGCFAS-SNLKKCSACQVVWYCGSNCQKLDWKLHRLECQVLS 71 (456)
Q Consensus 27 ~~~C~~C~~~-~~~~~C~~C~~v~yCs~~C~~~~~~~H~~EC~~l~ 71 (456)
...|.-|+.. ..++.|..|+. .|| ..|...-|..++..|+.=+
T Consensus 22 ~~~C~IC~~~~~~p~~~~~CgH-~FC-~~Ci~~~~~~~~~~CP~Cr 65 (100)
T 3lrq_A 22 VFRCFICMEKLRDARLCPHCSK-LCC-FSCIRRWLTEQRAQCPHCR 65 (100)
T ss_dssp HTBCTTTCSBCSSEEECTTTCC-EEE-HHHHHHHHHHTCSBCTTTC
T ss_pred CCCCccCCccccCccccCCCCC-hhh-HHHHHHHHHHCcCCCCCCC
Confidence 3568899888 45667789999 599 6898765554446787543
No 404
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=23.23 E-value=63 Score=22.91 Aligned_cols=24 Identities=17% Similarity=0.214 Sum_probs=18.0
Q ss_pred HHHHHHHHccCHHHHHHHHHHHHH
Q 012772 355 KLIKILMELEDWKEALAYCQLTIP 378 (456)
Q Consensus 355 ~L~~~~~~~g~~~~A~~~~~~~l~ 378 (456)
.++..+...|++++|..++-+++.
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~ 45 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIA 45 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHH
Confidence 467777888889888887766554
No 405
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=23.21 E-value=5.3e+02 Score=25.13 Aligned_cols=51 Identities=4% Similarity=-0.021 Sum_probs=30.7
Q ss_pred HccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHH
Q 012772 362 ELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLG-DTENAIKSMTEAVEI 421 (456)
Q Consensus 362 ~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~~g-~~~eA~~~l~~Al~i 421 (456)
+.++.+.|...+.++ . .|+. ....+...|.+-...| +.+.|.+++++|++.
T Consensus 298 r~~~~~~AR~i~~~A-~-----~~~~---~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~ 349 (493)
T 2uy1_A 298 KKRGLELFRKLFIEL-G-----NEGV---GPHVFIYCAFIEYYATGSRATPYNIFSSGLLK 349 (493)
T ss_dssp HHHCHHHHHHHHHHH-T-----TSCC---CHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHh-h-----CCCC---ChHHHHHHHHHHHHHCCChHHHHHHHHHHHHH
Confidence 355666666666655 1 1222 2234444565555555 588999999998873
No 406
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=23.10 E-value=1.3e+02 Score=29.42 Aligned_cols=34 Identities=12% Similarity=0.071 Sum_probs=28.4
Q ss_pred CccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Q 012772 346 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPV 379 (456)
Q Consensus 346 h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~ 379 (456)
++....+..-++.+|+.+|+|++|.+++++++..
T Consensus 187 r~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 187 KPNTDVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred ccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 4455667778999999999999999999998853
No 407
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=23.06 E-value=1e+02 Score=30.19 Aligned_cols=36 Identities=8% Similarity=-0.002 Sum_probs=31.9
Q ss_pred CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 012772 386 QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 421 (456)
Q Consensus 386 ~~hp~~~~~l~~La~~~~~~g~~~eA~~~l~~Al~i 421 (456)
..++..+..+--||++|+..|++++|.++.++++..
T Consensus 190 ~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 190 KGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp TTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 457888889999999999999999999999988864
No 408
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=22.97 E-value=1.7e+02 Score=19.28 Aligned_cols=26 Identities=19% Similarity=0.208 Sum_probs=19.3
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHH
Q 012772 398 CGKLEWFLGDTENAIKSMTEAVEILR 423 (456)
Q Consensus 398 La~~~~~~g~~~eA~~~l~~Al~i~~ 423 (456)
.|...+.-.+..-|++.|++|++++.
T Consensus 26 ~AiSAL~feDv~tA~~~L~~AL~lL~ 51 (53)
T 2rkl_A 26 YAISALNYEDLPTAKDELTKALDLLN 51 (53)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHcccccHHHHHHHHHHHHHHHh
Confidence 34444456778889999999999885
No 409
>3qt1_I DNA-directed RNA polymerases I, II, and III subun; transferase-transcription complex, RNA polymerase II, transc elongation; 4.30A {Saccharomyces cerevisiae}
Probab=22.84 E-value=50 Score=26.47 Aligned_cols=26 Identities=27% Similarity=0.620 Sum_probs=19.4
Q ss_pred CCCCCCCcccCCCC----CCeeeccCCCcC
Q 012772 271 DDGCSGFLLRDSDD----KGFTCQQCGLVR 296 (456)
Q Consensus 271 C~~C~~~~~~~~~~----~~~~C~~C~~~~ 296 (456)
|+.|.+.|.|..+. ..|.|..|+...
T Consensus 27 CPeCgNmL~pked~~~~~l~~~CrtCgY~~ 56 (133)
T 3qt1_I 27 CRDCNNMLYPREDKENNRLLFECRTCSYVE 56 (133)
T ss_dssp CTTTCCBCBCCBCTTTCCBCCBCSSSCCBC
T ss_pred CCCCCCEeeECccCCCceeEEECCCCCCcE
Confidence 68999988776432 359999998643
No 410
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=22.65 E-value=46 Score=25.82 Aligned_cols=26 Identities=19% Similarity=0.501 Sum_probs=19.5
Q ss_pred CCCCCCCcccCCCC----CCeeeccCCCcC
Q 012772 271 DDGCSGFLLRDSDD----KGFTCQQCGLVR 296 (456)
Q Consensus 271 C~~C~~~~~~~~~~----~~~~C~~C~~~~ 296 (456)
|+.|.+.|.+..+. ..|.|..|+...
T Consensus 7 Cp~Cgn~L~~~~~~~~~~~~~~C~~C~y~~ 36 (113)
T 3h0g_I 7 CIECNNMLYPREDKVDRVLRLACRNCDYSE 36 (113)
T ss_dssp CSSSCCCCEECCCTTTCCCCEECSSSCCEE
T ss_pred CcCCCCEeeEcccCCCCeeEEECCCCCCeE
Confidence 78999988776442 369999998643
No 411
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=22.57 E-value=92 Score=23.31 Aligned_cols=33 Identities=18% Similarity=0.247 Sum_probs=21.8
Q ss_pred HHHHHHHHccCHHHHHHHHH----------HHHHHHHHhcCCC
Q 012772 355 KLIKILMELEDWKEALAYCQ----------LTIPVYQRVYPQF 387 (456)
Q Consensus 355 ~L~~~~~~~g~~~~A~~~~~----------~~l~~~e~~~g~~ 387 (456)
.++..++..|+++.|+.++- ++|.+|++.+|+.
T Consensus 25 ~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL~i~q~TlP~~ 67 (95)
T 1om2_A 25 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPP 67 (95)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCCH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHHhhCCHH
Confidence 46666777788888777544 4455566777764
No 412
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=22.46 E-value=27 Score=24.04 Aligned_cols=32 Identities=28% Similarity=0.672 Sum_probs=25.0
Q ss_pred CCCccCcCcCCCC-----CCccCcCCCCcccccHHhhhh
Q 012772 25 SSISRCDGCFASS-----NLKKCSACQVVWYCGSNCQKL 58 (456)
Q Consensus 25 ~~~~~C~~C~~~~-----~~~~C~~C~~v~yCs~~C~~~ 58 (456)
...+.|++|-... .-+.|..|++. |-+.|...
T Consensus 22 ~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~--~Hk~C~~~ 58 (66)
T 1y8f_A 22 TTPTYCYECEGLLWGIARQGMRCTECGVK--CHEKCQDL 58 (66)
T ss_dssp SSCCCCTTTCCCCCSSCCEEEEETTTCCE--ECTTHHHH
T ss_pred CCCcChhhcChhhcccCcceeEcCCCCCe--eCHHHHhh
Confidence 3579999998773 24689999986 88888754
No 413
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=21.74 E-value=26 Score=23.78 Aligned_cols=29 Identities=28% Similarity=0.760 Sum_probs=21.9
Q ss_pred CccCcCcCCCCC---CccCcCCCCcccccHHhhh
Q 012772 27 ISRCDGCFASSN---LKKCSACQVVWYCGSNCQK 57 (456)
Q Consensus 27 ~~~C~~C~~~~~---~~~C~~C~~v~yCs~~C~~ 57 (456)
...|..|..+.+ .++|+.|+. .|| -+|-.
T Consensus 15 ~~~C~~C~~~~~~~~~y~C~~C~~-~FC-~dCD~ 46 (59)
T 1z60_A 15 ERFCYGCQGELKDQHVYVCAVCQN-VFC-VDCDV 46 (59)
T ss_dssp CCEETTTTEECTTSEEECCTTTTC-CBC-HHHHH
T ss_pred CCcccccCcccCCCccEECCccCc-Ccc-cchhH
Confidence 357999988742 478999999 599 57753
No 414
>1jjd_A Metallothionein, SMTA; zinc finger, zinc cluster, metal binding PR; NMR {Synechococcus elongatus} SCOP: g.46.1.1
Probab=21.37 E-value=41 Score=22.45 Aligned_cols=10 Identities=30% Similarity=1.036 Sum_probs=8.3
Q ss_pred ccccHHhhhh
Q 012772 49 WYCGSNCQKL 58 (456)
Q Consensus 49 ~yCs~~C~~~ 58 (456)
.|||++|...
T Consensus 29 ~YCSe~Ca~g 38 (55)
T 1jjd_A 29 YYCSEACADG 38 (55)
T ss_dssp EESSHHHHHT
T ss_pred EEehHHHHcc
Confidence 7999999853
No 415
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=21.31 E-value=1e+02 Score=30.00 Aligned_cols=51 Identities=20% Similarity=0.148 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Q 012772 352 TREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF 404 (456)
Q Consensus 352 ~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~~g~~hp~~~~~l~~La~~~~~ 404 (456)
.+..++..+.+.+.|+.|+..|+.++..|+.. .+--.++..+..++++|..
T Consensus 90 ll~~ai~~f~kg~~~E~ai~~~k~L~~~ye~~--~dy~~Ls~~~~~~a~~y~~ 140 (428)
T 2wm9_A 90 LLEQCADGLWKAERYELIADIYKLIIPIYEKR--RDFERLAHLYDTLHRAYSK 140 (428)
T ss_dssp HHHHHHHHHHHTTCGGGHHHHHTTTHHHHHHT--TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHH
Confidence 44555566667789999999999999999986 4556666677777666643
No 416
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=21.18 E-value=20 Score=23.31 Aligned_cols=29 Identities=31% Similarity=0.691 Sum_probs=22.2
Q ss_pred CccCcCcCCC-CCCccCcCCCCcccccHHhhh
Q 012772 27 ISRCDGCFAS-SNLKKCSACQVVWYCGSNCQK 57 (456)
Q Consensus 27 ~~~C~~C~~~-~~~~~C~~C~~v~yCs~~C~~ 57 (456)
.+.|++|.+. .....|..|++. |=+.|+.
T Consensus 14 ~t~C~~C~k~i~~G~kC~~Ck~~--cH~kC~~ 43 (49)
T 1kbe_A 14 SQVCNVCQKSMIFGVKCKHCRLK--CHNKCTK 43 (49)
T ss_dssp SCCCSSSCCSSCCEEEETTTTEE--ESSSCTT
T ss_pred CcCccccCceeECcCCCCCCCCc--cchhhcC
Confidence 3889999888 344789999985 7777765
No 417
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=21.15 E-value=2.1e+02 Score=21.56 Aligned_cols=18 Identities=22% Similarity=0.397 Sum_probs=12.8
Q ss_pred CeeeccCCCcCCHHHHHH
Q 012772 286 GFTCQQCGLVRSKEEIKK 303 (456)
Q Consensus 286 ~~~C~~C~~~~~~~~~~~ 303 (456)
+-.||.||...+......
T Consensus 47 g~~CPvCgs~l~~~~~~~ 64 (112)
T 1l8d_A 47 KGKCPVCGRELTDEHREE 64 (112)
T ss_dssp SEECTTTCCEECHHHHHH
T ss_pred CCCCCCCCCcCCHHHHHH
Confidence 457999999888754433
No 418
>2w0t_A Lethal(3)malignant brain tumor-like 2 protein; zinc, YACG, LMBL2, nucleus, zinc-finger, RNA binding, MBT repeats, PCG proteins, polymorphism; NMR {Homo sapiens}
Probab=21.10 E-value=45 Score=20.98 Aligned_cols=10 Identities=20% Similarity=0.919 Sum_probs=8.4
Q ss_pred ccccHHhhhh
Q 012772 49 WYCGSNCQKL 58 (456)
Q Consensus 49 ~yCs~~C~~~ 58 (456)
.|||..|.+.
T Consensus 27 RFCS~~Carr 36 (43)
T 2w0t_A 27 RFCSVSCSRS 36 (43)
T ss_dssp SSSSHHHHHH
T ss_pred ceechhhhCc
Confidence 7999999764
No 419
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=20.86 E-value=3.6e+02 Score=26.14 Aligned_cols=72 Identities=15% Similarity=0.079 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh-cCCCChHHHHHHHHHHH
Q 012772 326 EVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRV-YPQFHPLLGLQYYTCGK 400 (456)
Q Consensus 326 ~a~~~~~~~~~~~~~~l~p~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~~~e~~-~g~~hp~~~~~l~~La~ 400 (456)
.++.+|.+++...+..+...|.+- +.-++.-+.+.+++.+|+.....+-.+.... |..+.-++=..++++|.
T Consensus 297 ~~~~L~~~AI~sa~~~Y~n~HvYP---YtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eIAn 369 (550)
T 3u84_A 297 DPLTLYHKGIASAKTYYRDEHIYP---YMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVAN 369 (550)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHH---HHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCccc---eeecchhhhhcchHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHH
Confidence 467899999888877777666543 3456778888999999999987777665543 33444444444444443
No 420
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.85 E-value=46 Score=24.21 Aligned_cols=32 Identities=25% Similarity=0.450 Sum_probs=25.2
Q ss_pred CCCccCcCcCCCC-----CCccCcCCCCcccccHHhhhh
Q 012772 25 SSISRCDGCFASS-----NLKKCSACQVVWYCGSNCQKL 58 (456)
Q Consensus 25 ~~~~~C~~C~~~~-----~~~~C~~C~~v~yCs~~C~~~ 58 (456)
...+.|++|.... .-+.|..|++. |-+.|...
T Consensus 26 ~~pt~C~~C~~~l~Gl~kqG~~C~~C~~~--~Hk~C~~~ 62 (85)
T 2eli_A 26 GSPTFCDHCGSLLYGLIHQGMKCDTCDMN--VHKQCVIN 62 (85)
T ss_dssp SSCCBCSSSCCBCCCSSSCEEECSSSCCE--EETTTTTT
T ss_pred CCCcCCcccCccccccccCCCcCCCcCCc--cCHhHHhh
Confidence 3679999998762 34789999985 88899764
No 421
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=20.82 E-value=1.9e+02 Score=28.60 Aligned_cols=55 Identities=11% Similarity=0.171 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHhhcCC---CCccHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Q 012772 324 HQEVVSTYKMIEKLQKKLYHP---FSVNLMQTREKLIKILMELEDWKEALAYCQLTIP 378 (456)
Q Consensus 324 ~~~a~~~~~~~~~~~~~~l~p---~h~~~~~~~~~L~~~~~~~g~~~~A~~~~~~~l~ 378 (456)
++..++-++.+.......... .+.....++.-+|.+|+.+|+|++|+.++++++.
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~ 231 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLA 231 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
No 422
>2das_A Zinc finger MYM-type protein 5; trash domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.17
Probab=20.80 E-value=46 Score=22.47 Aligned_cols=33 Identities=12% Similarity=0.339 Sum_probs=20.6
Q ss_pred CCCccCcCcCCCC-CC---ccCcCCCCcccccHHhhhh
Q 012772 25 SSISRCDGCFASS-NL---KKCSACQVVWYCGSNCQKL 58 (456)
Q Consensus 25 ~~~~~C~~C~~~~-~~---~~C~~C~~v~yCs~~C~~~ 58 (456)
.....|.+|-+.. +- +.=.+... .|||..|...
T Consensus 18 ~~~v~C~~CKk~lqKGQtAyqrkGs~~-LFCS~~CL~~ 54 (62)
T 2das_A 18 PAKITCANCKKPLQKGQTAYQRKGSAH-LFCSTTCLSS 54 (62)
T ss_dssp CSSCBCTTTCCBCCTTSCCEECTTCCC-EESSHHHHHH
T ss_pred ccccChhhccchhhcCceeeeecCchh-heechHHHcc
Confidence 3567788887772 22 22234444 6999999754
No 423
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=20.39 E-value=1.8e+02 Score=21.97 Aligned_cols=35 Identities=17% Similarity=0.023 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhc
Q 012772 392 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITH 426 (456)
Q Consensus 392 ~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~ 426 (456)
+..+.--|.-..+.|++++|.+.+++|-+-+...|
T Consensus 18 Ars~~~eAl~~Ak~g~fe~A~~~l~eA~~~l~~AH 52 (103)
T 1wcr_A 18 ARSLAYAALKQAKQGDFAAAKAMMDQSRMALNEAH 52 (103)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
No 424
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=20.34 E-value=1.8e+02 Score=22.07 Aligned_cols=35 Identities=17% Similarity=-0.055 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhc
Q 012772 392 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITH 426 (456)
Q Consensus 392 ~~~l~~La~~~~~~g~~~eA~~~l~~Al~i~~~~~ 426 (456)
|..+.--|.-..+.|++++|.+.+++|-+-+...|
T Consensus 20 ArS~~~eAl~~Ak~g~fe~A~~~l~eA~~~l~~AH 54 (105)
T 2e2a_A 20 ARSKLLEALKAAENGDFAKADSLVVEAGSCIAEAH 54 (105)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
No 425
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=20.30 E-value=50 Score=23.49 Aligned_cols=42 Identities=12% Similarity=0.192 Sum_probs=29.4
Q ss_pred CCceeecCCCCCCccCcCcCCC-C----CCccCcCCCCcccccHHhhhh
Q 012772 15 EPYVCVPNNSSSISRCDGCFAS-S----NLKKCSACQVVWYCGSNCQKL 58 (456)
Q Consensus 15 ~P~~~~~~~~~~~~~C~~C~~~-~----~~~~C~~C~~v~yCs~~C~~~ 58 (456)
.+--+.+..-...+.|++|-.. . .-+.|..|++. |-+.|...
T Consensus 22 ~~H~F~~~~f~~pt~C~~C~~~lwGl~kqG~~C~~C~~~--~Hk~C~~~ 68 (77)
T 2enn_A 22 KCHEFTATFFPQPTFCSVCHEFVWGLNKQGYQCRQCNAA--IHKKCIDK 68 (77)
T ss_dssp SSCEEEEECCSSCEECSSSCCEECCTTCCEEECSSSCCE--EESGGGSS
T ss_pred CCCccEEEcCCCCcCccccChhhccccccccCcCCCCCc--CCHhHHhh
Confidence 4444444444468999999876 2 34789999985 88888754
No 426
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=20.13 E-value=39 Score=26.62 Aligned_cols=37 Identities=22% Similarity=0.580 Sum_probs=22.4
Q ss_pred ecCCCCCCccCcCcCCCCC----CccCcCCCCcccccHHhhhh
Q 012772 20 VPNNSSSISRCDGCFASSN----LKKCSACQVVWYCGSNCQKL 58 (456)
Q Consensus 20 ~~~~~~~~~~C~~C~~~~~----~~~C~~C~~v~yCs~~C~~~ 58 (456)
.+.+......|..|....+ .--|..|+.+ ||+ .|...
T Consensus 12 ~~~Pd~~~~~C~~C~~~Fs~~~RkHHCR~CG~i-fC~-~Cs~~ 52 (120)
T 1y02_A 12 FPSPTGLEPSCKSCGAHFANTARKQTCLDCKKN-FCM-TCSSQ 52 (120)
T ss_dssp --------CCCTTTCCCCSSGGGCEECTTTCCE-ECG-GGEEC
T ss_pred CCcCccccCcccCcCCccccccccccCCCCCCe-eCH-HHhCC
Confidence 3444555689999998843 3469999995 997 57644
Done!