Query 012774
Match_columns 456
No_of_seqs 204 out of 2553
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 06:10:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012774.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012774hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 8.3E-70 1.8E-74 527.4 39.0 394 56-456 30-446 (537)
2 KOG1177 Long chain fatty acid 100.0 3.7E-67 8E-72 475.4 31.4 412 38-456 50-499 (596)
3 COG0318 CaiC Acyl-CoA syntheta 100.0 6E-66 1.3E-70 517.4 40.0 412 37-456 10-439 (534)
4 PLN02614 long-chain acyl-CoA s 100.0 1.3E-65 2.7E-70 527.4 38.9 409 38-456 45-535 (666)
5 PLN02574 4-coumarate--CoA liga 100.0 2E-64 4.3E-69 512.1 46.4 438 11-456 14-468 (560)
6 COG0365 Acs Acyl-coenzyme A sy 100.0 8.6E-66 1.9E-70 496.6 33.2 407 37-456 7-434 (528)
7 PTZ00342 acyl-CoA synthetase; 100.0 5E-65 1.1E-69 521.9 39.8 427 21-456 45-609 (746)
8 PLN02736 long-chain acyl-CoA s 100.0 1.6E-63 3.4E-68 513.1 41.1 411 35-456 41-526 (651)
9 PLN02861 long-chain-fatty-acid 100.0 8E-64 1.7E-68 514.4 38.6 408 38-456 43-532 (660)
10 PRK06334 long chain fatty acid 100.0 1.6E-63 3.5E-68 502.2 39.9 408 38-456 19-448 (539)
11 COG1022 FAA1 Long-chain acyl-C 100.0 2.4E-63 5.3E-68 485.9 33.3 397 38-455 16-487 (613)
12 PLN02246 4-coumarate--CoA liga 100.0 9.9E-62 2.1E-66 490.5 45.0 425 21-456 9-450 (537)
13 PLN02860 o-succinylbenzoate-Co 100.0 2E-62 4.4E-67 497.7 38.4 406 37-456 6-452 (563)
14 KOG1256 Long-chain acyl-CoA sy 100.0 1.6E-62 3.5E-67 472.8 35.6 412 35-455 72-565 (691)
15 PRK07788 acyl-CoA synthetase; 100.0 4.4E-62 9.6E-67 494.4 39.6 399 39-456 50-465 (549)
16 PTZ00237 acetyl-CoA synthetase 100.0 7.4E-62 1.6E-66 498.8 38.6 413 35-456 55-530 (647)
17 PLN02654 acetate-CoA ligase 100.0 9.9E-62 2.1E-66 499.4 38.3 413 35-456 84-551 (666)
18 PLN02330 4-coumarate--CoA liga 100.0 1E-60 2.2E-65 484.0 43.1 428 21-456 14-455 (546)
19 PLN02387 long-chain-fatty-acid 100.0 8.8E-62 1.9E-66 501.3 35.6 410 38-456 58-574 (696)
20 PTZ00216 acyl-CoA synthetase; 100.0 1.2E-61 2.6E-66 501.6 35.2 407 38-456 69-575 (700)
21 TIGR02316 propion_prpE propion 100.0 7.4E-61 1.6E-65 491.6 40.6 414 35-456 48-510 (628)
22 PRK07529 AMP-binding domain pr 100.0 1.1E-60 2.5E-65 489.9 41.8 408 38-456 25-483 (632)
23 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 1.9E-60 4E-65 489.2 41.2 414 35-456 53-513 (625)
24 PRK08314 long-chain-fatty-acid 100.0 2.2E-60 4.8E-65 482.1 41.1 405 38-456 10-454 (546)
25 PRK13295 cyclohexanecarboxylat 100.0 2.6E-60 5.7E-65 481.0 41.3 409 38-456 24-457 (547)
26 PF00501 AMP-binding: AMP-bind 100.0 8.2E-62 1.8E-66 476.4 27.4 393 44-447 1-417 (417)
27 PRK00174 acetyl-CoA synthetase 100.0 8E-60 1.7E-64 485.3 41.7 414 35-456 63-521 (637)
28 PRK13382 acyl-CoA synthetase; 100.0 4.4E-60 9.5E-65 477.9 39.0 400 38-456 43-454 (537)
29 PRK09274 peptide synthase; Pro 100.0 3.4E-60 7.5E-65 481.1 37.7 405 38-456 6-458 (552)
30 PRK07769 long-chain-fatty-acid 100.0 2E-60 4.4E-65 489.2 35.9 422 20-456 3-501 (631)
31 PRK07638 acyl-CoA synthetase; 100.0 7.7E-60 1.7E-64 471.4 38.5 399 38-456 1-399 (487)
32 PRK06839 acyl-CoA synthetase; 100.0 5.6E-60 1.2E-64 473.9 37.2 401 39-456 3-409 (496)
33 PRK06145 acyl-CoA synthetase; 100.0 1.3E-59 2.8E-64 471.1 39.7 406 38-456 2-411 (497)
34 PRK05677 long-chain-fatty-acid 100.0 2E-59 4.4E-64 475.9 41.5 409 37-456 23-471 (562)
35 PRK03640 O-succinylbenzoic aci 100.0 1.2E-59 2.6E-64 469.9 38.9 397 38-456 2-398 (483)
36 COG1021 EntE Peptide arylation 100.0 1.4E-61 3E-66 429.5 21.9 406 38-456 28-452 (542)
37 PRK06060 acyl-CoA synthetase; 100.0 8.6E-60 1.9E-64 490.0 37.3 394 39-456 5-403 (705)
38 PRK05857 acyl-CoA synthetase; 100.0 1.5E-59 3.2E-64 474.4 37.5 410 38-456 14-440 (540)
39 PLN02430 long-chain-fatty-acid 100.0 2.3E-59 4.9E-64 480.6 39.0 409 38-456 42-532 (660)
40 PRK08180 feruloyl-CoA synthase 100.0 5E-59 1.1E-63 476.8 39.6 402 37-453 38-480 (614)
41 PRK07656 long-chain-fatty-acid 100.0 4.1E-59 8.9E-64 469.6 38.4 407 38-456 5-430 (513)
42 PRK04319 acetyl-CoA synthetase 100.0 6.8E-59 1.5E-63 472.8 39.8 408 37-456 41-470 (570)
43 PRK07786 long-chain-fatty-acid 100.0 1.1E-58 2.4E-63 468.7 40.8 409 36-456 15-437 (542)
44 PRK08315 AMP-binding domain pr 100.0 1.1E-58 2.3E-63 471.1 40.8 413 38-456 16-465 (559)
45 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 1.4E-58 3E-63 466.5 40.8 407 37-456 22-446 (527)
46 PRK05605 long-chain-fatty-acid 100.0 1.3E-58 2.8E-63 471.4 40.9 409 38-456 32-483 (573)
47 PRK10524 prpE propionyl-CoA sy 100.0 8.2E-59 1.8E-63 477.4 39.1 415 35-456 49-511 (629)
48 PRK08316 acyl-CoA synthetase; 100.0 7.9E-59 1.7E-63 468.7 38.2 407 38-456 11-433 (523)
49 PRK06155 crotonobetaine/carnit 100.0 2.9E-58 6.4E-63 464.9 41.8 404 36-456 19-438 (542)
50 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 2.8E-58 6E-63 465.5 40.7 409 38-456 22-455 (538)
51 PRK12467 peptide synthase; Pro 100.0 2.6E-59 5.7E-64 552.0 38.2 402 38-456 3095-3509(3956)
52 PRK12582 acyl-CoA synthetase; 100.0 7.7E-59 1.7E-63 476.3 36.5 410 31-456 42-495 (624)
53 PRK07514 malonyl-CoA synthase; 100.0 3.5E-58 7.5E-63 461.8 40.2 404 38-456 3-415 (504)
54 PRK10252 entF enterobactin syn 100.0 1.1E-58 2.4E-63 513.3 39.3 401 38-456 458-875 (1296)
55 PRK06087 short chain acyl-CoA 100.0 5.7E-58 1.2E-62 464.3 39.7 407 38-456 23-448 (547)
56 PRK05852 acyl-CoA synthetase; 100.0 4.2E-58 9.1E-63 463.8 38.6 409 38-456 16-446 (534)
57 TIGR03443 alpha_am_amid L-amin 100.0 1.7E-58 3.7E-63 513.5 38.8 410 38-456 236-716 (1389)
58 PRK12583 acyl-CoA synthetase; 100.0 9E-58 1.9E-62 464.4 40.1 412 38-456 18-466 (558)
59 PRK12476 putative fatty-acid-- 100.0 1.7E-58 3.8E-63 472.9 34.0 403 38-456 34-513 (612)
60 PRK07470 acyl-CoA synthetase; 100.0 9.5E-58 2.1E-62 460.9 38.8 409 36-456 5-432 (528)
61 PRK07059 Long-chain-fatty-acid 100.0 2.1E-57 4.6E-62 461.0 41.5 411 35-456 20-473 (557)
62 PRK12316 peptide synthase; Pro 100.0 2.9E-58 6.2E-63 551.2 40.7 404 38-456 511-924 (5163)
63 PRK09088 acyl-CoA synthetase; 100.0 1.1E-57 2.3E-62 456.2 38.4 392 47-456 4-399 (488)
64 PLN03052 acetate--CoA ligase; 100.0 1.8E-57 3.8E-62 469.1 41.0 413 35-456 171-627 (728)
65 PRK12492 long-chain-fatty-acid 100.0 1.3E-57 2.7E-62 462.7 39.3 410 37-456 23-479 (562)
66 PRK08633 2-acyl-glycerophospho 100.0 5.9E-58 1.3E-62 502.6 39.7 411 37-456 614-1057(1146)
67 PLN03102 acyl-activating enzym 100.0 1.4E-57 3.1E-62 462.9 39.3 406 38-456 14-458 (579)
68 PRK06187 long-chain-fatty-acid 100.0 1.6E-57 3.4E-62 459.1 39.2 407 37-456 5-433 (521)
69 PRK08043 bifunctional acyl-[ac 100.0 5.5E-58 1.2E-62 476.7 36.5 401 38-456 204-629 (718)
70 PRK03584 acetoacetyl-CoA synth 100.0 2.8E-57 6.2E-62 467.6 41.0 409 35-456 83-536 (655)
71 PRK12467 peptide synthase; Pro 100.0 4.8E-58 1E-62 541.4 39.5 405 38-456 1574-1992(3956)
72 PRK13383 acyl-CoA synthetase; 100.0 2.1E-57 4.6E-62 456.7 38.4 397 37-456 34-434 (516)
73 TIGR03098 ligase_PEP_1 acyl-Co 100.0 2.8E-57 6.2E-62 456.4 39.3 404 39-456 1-432 (515)
74 PRK08008 caiC putative crotono 100.0 5E-57 1.1E-61 454.6 40.7 408 38-456 7-436 (517)
75 PRK06178 acyl-CoA synthetase; 100.0 8.6E-57 1.9E-61 457.5 42.3 413 35-456 30-480 (567)
76 PRK13388 acyl-CoA synthetase; 100.0 4.6E-57 1E-61 456.0 39.9 398 38-456 3-418 (540)
77 PRK06164 acyl-CoA synthetase; 100.0 2.5E-57 5.4E-62 459.1 37.8 408 38-456 10-444 (540)
78 PRK05851 long-chain-fatty-acid 100.0 6.9E-58 1.5E-62 460.6 33.5 399 38-456 1-433 (525)
79 PRK12316 peptide synthase; Pro 100.0 8.8E-58 1.9E-62 547.0 39.8 404 38-456 2003-2419(5163)
80 PRK08751 putative long-chain f 100.0 1.4E-56 3.1E-61 455.4 40.8 427 20-456 5-475 (560)
81 PRK07867 acyl-CoA synthetase; 100.0 1.9E-56 4.1E-61 450.1 41.2 399 38-456 5-419 (529)
82 PRK06188 acyl-CoA synthetase; 100.0 9.6E-57 2.1E-61 453.1 38.6 407 38-456 12-431 (524)
83 PRK10946 entE enterobactin syn 100.0 1.8E-56 3.8E-61 451.8 40.4 404 38-456 25-447 (536)
84 TIGR01217 ac_ac_CoA_syn acetoa 100.0 2.4E-56 5.3E-61 458.8 41.5 408 35-456 84-537 (652)
85 TIGR01734 D-ala-DACP-lig D-ala 100.0 1.1E-56 2.4E-61 450.6 37.6 402 39-456 1-411 (502)
86 PRK06710 long-chain-fatty-acid 100.0 5.2E-56 1.1E-60 451.4 41.3 407 38-456 24-469 (563)
87 PRK05691 peptide synthase; Val 100.0 5.3E-57 1.1E-61 536.9 38.6 401 38-456 3720-4140(4334)
88 PRK05691 peptide synthase; Val 100.0 9.6E-57 2.1E-61 534.7 40.3 402 38-456 1131-1543(4334)
89 PRK08279 long-chain-acyl-CoA s 100.0 5.8E-56 1.3E-60 454.0 38.9 406 35-456 34-477 (600)
90 PLN02479 acetate-CoA ligase 100.0 9E-56 1.9E-60 449.4 39.4 408 37-456 19-468 (567)
91 PRK13390 acyl-CoA synthetase; 100.0 3.8E-56 8.3E-61 446.3 35.8 394 47-456 6-417 (501)
92 PRK07787 acyl-CoA synthetase; 100.0 7.8E-56 1.7E-60 440.4 37.1 372 56-456 14-389 (471)
93 PRK07008 long-chain-fatty-acid 100.0 8.7E-56 1.9E-60 447.0 37.5 405 38-456 10-447 (539)
94 TIGR03205 pimA dicarboxylate-- 100.0 5.4E-55 1.2E-59 441.8 41.8 406 38-456 21-459 (541)
95 TIGR02262 benz_CoA_lig benzoat 100.0 3.7E-55 8E-60 439.9 40.0 401 41-456 7-422 (508)
96 PRK05620 long-chain-fatty-acid 100.0 2.3E-55 4.9E-60 447.5 38.6 409 38-456 10-468 (576)
97 PRK04813 D-alanine--poly(phosp 100.0 4.3E-55 9.2E-60 439.4 38.3 403 38-456 2-413 (503)
98 PRK05850 acyl-CoA synthetase; 100.0 1.4E-55 3E-60 449.7 34.7 403 38-456 1-474 (578)
99 PRK06018 putative acyl-CoA syn 100.0 8.2E-55 1.8E-59 440.4 39.3 406 37-456 9-448 (542)
100 PRK08974 long-chain-fatty-acid 100.0 2.8E-54 6.1E-59 438.4 41.8 408 38-456 23-470 (560)
101 TIGR01733 AA-adenyl-dom amino 100.0 1.2E-54 2.7E-59 424.4 36.4 379 71-456 1-393 (408)
102 PRK08162 acyl-CoA synthetase; 100.0 5.3E-54 1.2E-58 435.3 40.2 407 38-456 18-454 (545)
103 PRK13391 acyl-CoA synthetase; 100.0 5.3E-54 1.1E-58 431.7 37.9 395 46-456 5-420 (511)
104 PRK06814 acylglycerophosphoeth 100.0 6.6E-54 1.4E-58 469.0 40.8 403 37-456 630-1048(1140)
105 PRK09192 acyl-CoA synthetase; 100.0 2.8E-54 6E-59 439.6 33.8 404 38-456 21-476 (579)
106 KOG1180 Acyl-CoA synthetase [L 100.0 1.2E-54 2.6E-59 400.5 28.0 410 35-453 38-551 (678)
107 PRK07798 acyl-CoA synthetase; 100.0 3E-53 6.6E-58 429.0 40.4 403 38-456 3-446 (533)
108 PRK12406 long-chain-fatty-acid 100.0 2.9E-53 6.3E-58 426.3 38.3 385 59-456 3-417 (509)
109 PRK08276 long-chain-fatty-acid 100.0 2.2E-53 4.8E-58 426.5 36.5 386 60-456 2-407 (502)
110 PRK07868 acyl-CoA synthetase; 100.0 5E-53 1.1E-57 449.7 38.6 397 37-456 446-874 (994)
111 PRK07445 O-succinylbenzoic aci 100.0 1.4E-53 3E-58 419.9 31.1 343 69-456 19-362 (452)
112 PRK07768 long-chain-fatty-acid 100.0 1.3E-52 2.8E-57 425.0 36.6 401 39-456 3-452 (545)
113 PRK09029 O-succinylbenzoic aci 100.0 1.1E-52 2.4E-57 416.3 34.4 359 46-456 11-369 (458)
114 PLN03051 acyl-activating enzym 100.0 3.5E-52 7.6E-57 416.4 32.1 351 102-456 1-395 (499)
115 TIGR01923 menE O-succinylbenzo 100.0 3.8E-51 8.3E-56 403.2 34.2 358 71-456 1-358 (436)
116 KOG1179 Very long-chain acyl-C 100.0 1.6E-49 3.5E-54 368.1 34.6 407 37-456 76-526 (649)
117 KOG1175 Acyl-CoA synthetase [L 100.0 3.3E-50 7.2E-55 389.0 30.2 415 35-456 60-513 (626)
118 PRK08308 acyl-CoA synthetase; 100.0 2.4E-49 5.2E-54 387.1 35.2 327 61-456 2-329 (414)
119 COG1020 EntF Non-ribosomal pep 100.0 9.9E-44 2.1E-48 366.8 34.8 402 38-456 227-634 (642)
120 PTZ00297 pantothenate kinase; 100.0 3.9E-42 8.4E-47 366.6 33.2 375 37-455 426-874 (1452)
121 PRK07824 O-succinylbenzoic aci 100.0 1.2E-36 2.6E-41 291.7 24.4 236 188-456 31-271 (358)
122 TIGR02155 PA_CoA_ligase phenyl 100.0 3.5E-32 7.7E-37 266.1 20.3 247 190-456 73-333 (422)
123 TIGR02372 4_coum_CoA_lig 4-cou 100.0 5.3E-31 1.2E-35 251.7 18.4 216 192-456 95-313 (386)
124 KOG3628 Predicted AMP-binding 100.0 1.2E-26 2.6E-31 229.5 27.6 413 38-456 770-1267(1363)
125 TIGR03335 F390_ftsA coenzyme F 99.9 5.8E-27 1.3E-31 229.5 19.3 248 190-456 84-345 (445)
126 TIGR03089 conserved hypothetic 99.9 8.6E-26 1.9E-30 200.0 21.6 205 44-283 2-227 (227)
127 COG1541 PaaK Coenzyme F390 syn 99.9 7E-24 1.5E-28 197.5 18.0 249 188-455 86-348 (438)
128 KOG1178 Non-ribosomal peptide 99.9 1.7E-22 3.7E-27 206.3 19.4 403 39-456 37-492 (1032)
129 KOG3628 Predicted AMP-binding 99.7 2.8E-16 6.1E-21 156.8 18.1 398 40-450 96-603 (1363)
130 TIGR02304 aden_form_hyp probab 99.6 2E-14 4.3E-19 138.0 18.5 222 194-453 101-344 (430)
131 PF04443 LuxE: Acyl-protein sy 99.3 1.6E-10 3.5E-15 108.7 19.5 228 190-442 87-350 (365)
132 PF03321 GH3: GH3 auxin-respon 98.2 9.7E-06 2.1E-10 81.1 10.2 124 306-453 266-408 (528)
133 PRK09188 serine/threonine prot 98.0 2.6E-06 5.7E-11 80.4 3.0 34 416-454 207-244 (365)
134 PLN02247 indole-3-acetic acid- 98.0 0.0016 3.5E-08 65.2 20.7 128 306-453 292-454 (606)
135 PLN02620 indole-3-acetic acid- 97.8 0.00068 1.5E-08 67.7 15.9 127 306-453 303-460 (612)
136 PLN02249 indole-3-acetic acid- 97.8 0.00038 8.3E-09 70.0 13.2 124 306-453 301-447 (597)
137 COG1541 PaaK Coenzyme F390 syn 95.8 0.12 2.6E-06 49.7 11.4 87 69-157 109-197 (438)
138 TIGR02155 PA_CoA_ligase phenyl 87.6 4.5 9.7E-05 39.7 10.1 86 69-156 94-181 (422)
139 TIGR03335 F390_ftsA coenzyme F 87.0 6.3 0.00014 39.0 10.7 81 69-153 105-187 (445)
140 PRK06187 long-chain-fatty-acid 81.6 16 0.00035 36.6 11.3 97 56-157 166-270 (521)
141 PRK07656 long-chain-fatty-acid 78.2 15 0.00032 36.8 9.8 97 56-157 165-270 (513)
142 TIGR03089 conserved hypothetic 78.0 15 0.00033 32.5 8.5 76 56-143 149-226 (227)
143 KOG1177 Long chain fatty acid 76.1 26 0.00057 34.4 9.7 116 37-156 206-338 (596)
144 PRK06334 long chain fatty acid 75.6 28 0.00061 35.4 10.9 97 56-156 182-287 (539)
145 PF00501 AMP-binding: AMP-bind 74.2 13 0.00029 36.1 7.9 98 56-157 154-262 (417)
146 TIGR01733 AA-adenyl-dom amino 73.3 45 0.00098 32.1 11.4 98 56-157 119-226 (408)
147 PRK04319 acetyl-CoA synthetase 70.2 41 0.00088 34.4 10.7 98 56-157 204-310 (570)
148 PRK08315 AMP-binding domain pr 70.0 46 0.00099 33.8 11.0 83 69-155 218-302 (559)
149 PRK12583 acyl-CoA synthetase; 70.0 54 0.0012 33.3 11.5 96 56-155 200-304 (558)
150 TIGR03590 PseG pseudaminic aci 68.5 58 0.0013 29.8 10.2 95 67-169 9-112 (279)
151 PLN03051 acyl-activating enzym 68.1 51 0.0011 33.1 10.7 97 56-156 118-222 (499)
152 PLN02246 4-coumarate--CoA liga 67.4 44 0.00095 33.9 10.2 100 56-156 178-286 (537)
153 PRK08308 acyl-CoA synthetase; 63.2 75 0.0016 30.8 10.6 97 56-157 100-205 (414)
154 PRK08316 acyl-CoA synthetase; 62.7 75 0.0016 31.9 10.8 84 69-157 190-275 (523)
155 TIGR01923 menE O-succinylbenzo 61.0 57 0.0012 31.8 9.4 95 56-157 110-212 (436)
156 PLN02860 o-succinylbenzoate-Co 59.7 1.1E+02 0.0024 31.2 11.5 96 56-156 171-274 (563)
157 TIGR03098 ligase_PEP_1 acyl-Co 59.4 86 0.0019 31.4 10.5 85 68-157 179-264 (515)
158 PRK06188 acyl-CoA synthetase; 59.3 89 0.0019 31.4 10.7 97 56-157 167-270 (524)
159 COG0399 WecE Predicted pyridox 59.1 35 0.00077 32.7 7.0 63 80-147 60-127 (374)
160 COG0318 CaiC Acyl-CoA syntheta 58.7 95 0.0021 31.5 10.7 99 56-156 170-278 (534)
161 PRK03640 O-succinylbenzoic aci 58.7 93 0.002 30.8 10.6 97 56-157 140-244 (483)
162 PRK08314 long-chain-fatty-acid 58.1 71 0.0015 32.3 9.7 96 56-156 189-293 (546)
163 PRK07470 acyl-CoA synthetase; 57.6 1E+02 0.0022 31.0 10.7 100 56-157 162-269 (528)
164 PRK07008 long-chain-fatty-acid 56.7 78 0.0017 32.1 9.7 86 69-156 195-281 (539)
165 PF01041 DegT_DnrJ_EryC1: DegT 56.1 34 0.00075 32.7 6.6 63 81-148 52-119 (363)
166 TIGR02262 benz_CoA_lig benzoat 55.0 1E+02 0.0022 30.8 10.2 98 56-156 160-266 (508)
167 KOG1179 Very long-chain acyl-C 54.1 1.6E+02 0.0034 29.9 10.4 128 69-201 261-402 (649)
168 PRK08043 bifunctional acyl-[ac 53.7 1.3E+02 0.0028 31.9 11.1 95 56-154 364-467 (718)
169 PRK07638 acyl-CoA synthetase; 53.5 1.3E+02 0.0029 29.8 10.7 84 69-157 162-246 (487)
170 COG4821 Uncharacterized protei 53.1 50 0.0011 28.3 6.0 55 75-150 85-139 (243)
171 PRK07529 AMP-binding domain pr 52.7 1.2E+02 0.0025 31.7 10.4 98 56-157 212-323 (632)
172 TIGR02316 propion_prpE propion 52.3 1.2E+02 0.0027 31.4 10.5 99 56-157 231-341 (628)
173 PRK13295 cyclohexanecarboxylat 52.2 1.5E+02 0.0033 30.0 11.0 96 56-156 196-300 (547)
174 TIGR02379 ECA_wecE TDP-4-keto- 51.6 68 0.0015 30.9 7.8 58 86-148 63-125 (376)
175 cd01445 TST_Repeats Thiosulfat 50.8 43 0.00093 26.9 5.4 41 80-121 81-124 (138)
176 PLN02736 long-chain acyl-CoA s 50.2 1.4E+02 0.0031 31.2 10.6 100 211-315 78-180 (651)
177 PRK13237 tyrosine phenol-lyase 50.1 1.2E+02 0.0026 30.0 9.1 70 68-142 76-174 (460)
178 PLN02614 long-chain acyl-CoA s 49.6 1.1E+02 0.0024 32.1 9.6 98 56-156 222-329 (666)
179 PRK05620 long-chain-fatty-acid 49.2 1.6E+02 0.0035 30.1 10.7 98 56-155 180-285 (576)
180 PRK11706 TDP-4-oxo-6-deoxy-D-g 48.8 87 0.0019 30.1 8.1 55 90-148 66-125 (375)
181 TIGR02275 DHB_AMP_lig 2,3-dihy 48.6 1.7E+02 0.0037 29.4 10.7 96 56-156 182-287 (527)
182 PTZ00342 acyl-CoA synthetase; 48.6 1.5E+02 0.0032 31.8 10.3 118 190-316 74-208 (746)
183 PRK06164 acyl-CoA synthetase; 48.4 1.6E+02 0.0035 29.7 10.5 97 56-157 180-284 (540)
184 PRK07787 acyl-CoA synthetase; 46.9 1.9E+02 0.0041 28.6 10.5 96 56-157 127-231 (471)
185 PRK06839 acyl-CoA synthetase; 46.7 2.8E+02 0.006 27.5 11.8 97 56-157 148-253 (496)
186 COG4009 Uncharacterized protei 45.7 38 0.00082 23.9 3.5 65 69-145 9-76 (88)
187 PRK08633 2-acyl-glycerophospho 45.0 1.5E+02 0.0033 33.3 10.5 98 56-157 781-887 (1146)
188 PRK03584 acetoacetyl-CoA synth 43.9 2E+02 0.0044 30.0 10.6 98 56-157 262-370 (655)
189 PLN03052 acetate--CoA ligase; 42.7 2.3E+02 0.005 30.2 10.8 99 190-290 188-289 (728)
190 PLN02387 long-chain-fatty-acid 42.7 2.1E+02 0.0045 30.3 10.5 101 211-316 106-209 (696)
191 PLN02574 4-coumarate--CoA liga 42.5 2.4E+02 0.0052 28.7 10.7 101 56-157 197-307 (560)
192 PRK10252 entF enterobactin syn 41.5 2.1E+02 0.0045 32.9 11.0 97 56-156 597-703 (1296)
193 PF00464 SHMT: Serine hydroxym 41.2 3.2E+02 0.0068 26.6 10.4 116 92-214 107-245 (399)
194 PRK10946 entE enterobactin syn 40.7 2.3E+02 0.0049 28.7 10.2 96 56-156 181-286 (536)
195 TIGR01734 D-ala-DACP-lig D-ala 40.7 3E+02 0.0066 27.3 11.0 97 56-156 140-246 (502)
196 PLN02861 long-chain-fatty-acid 40.6 1.7E+02 0.0038 30.6 9.4 99 56-157 219-327 (660)
197 PRK13388 acyl-CoA synthetase; 39.8 3.3E+02 0.0072 27.5 11.2 95 56-155 149-252 (540)
198 PRK09274 peptide synthase; Pro 39.8 2.3E+02 0.005 28.7 10.1 99 190-289 19-121 (552)
199 PRK10696 tRNA 2-thiocytidine b 39.3 2.5E+02 0.0054 25.3 9.1 78 71-149 4-94 (258)
200 TIGR03443 alpha_am_amid L-amin 38.9 2.5E+02 0.0054 32.6 11.1 97 56-156 414-520 (1389)
201 PRK08279 long-chain-acyl-CoA s 38.7 2.9E+02 0.0062 28.4 10.7 96 56-156 198-302 (600)
202 PRK06814 acylglycerophosphoeth 38.2 2.6E+02 0.0056 31.6 10.9 97 56-156 792-897 (1140)
203 PF11142 DUF2917: Protein of u 38.1 1.2E+02 0.0026 20.5 5.1 34 390-438 25-58 (63)
204 COG1022 FAA1 Long-chain acyl-C 38.0 2.5E+02 0.0053 29.2 9.6 97 56-157 190-294 (613)
205 PRK07788 acyl-CoA synthetase; 36.3 2.2E+02 0.0047 28.9 9.2 84 211-295 74-160 (549)
206 PLN02565 cysteine synthase 35.7 2.7E+02 0.0059 26.1 9.0 91 58-151 31-122 (322)
207 PRK05857 acyl-CoA synthetase; 35.6 2.5E+02 0.0053 28.5 9.5 95 189-291 26-123 (540)
208 PRK08008 caiC putative crotono 35.5 4E+02 0.0087 26.6 11.0 98 190-293 20-121 (517)
209 COG2236 Predicted phosphoribos 35.3 65 0.0014 27.6 4.3 33 68-101 5-37 (192)
210 PRK06155 crotonobetaine/carnit 35.2 2.5E+02 0.0055 28.4 9.5 85 211-296 46-133 (542)
211 PRK11658 UDP-4-amino-4-deoxy-L 35.2 1.6E+02 0.0035 28.3 7.6 62 81-147 60-126 (379)
212 PTZ00237 acetyl-CoA synthetase 35.0 1.7E+02 0.0038 30.5 8.4 78 210-289 91-172 (647)
213 PF01060 DUF290: Transthyretin 34.8 1.2E+02 0.0026 21.6 5.0 15 365-379 8-22 (80)
214 PRK05852 acyl-CoA synthetase; 34.7 4.8E+02 0.01 26.2 11.4 85 69-157 195-282 (534)
215 PRK06060 acyl-CoA synthetase; 34.3 3.3E+02 0.0071 28.8 10.4 98 56-156 144-250 (705)
216 cd07050 BMC_EutL_repeat2 ethan 34.2 61 0.0013 23.0 3.2 40 83-122 3-42 (87)
217 PF07210 DUF1416: Protein of u 33.8 1.3E+02 0.0029 21.6 4.8 19 363-382 16-34 (85)
218 PRK06087 short chain acyl-CoA 33.7 4E+02 0.0086 26.9 10.7 91 56-151 186-285 (547)
219 PLN03102 acyl-activating enzym 33.7 2.1E+02 0.0044 29.4 8.6 82 211-293 39-123 (579)
220 TIGR01796 CM_mono_aroH monofun 33.6 58 0.0012 25.2 3.3 56 70-125 13-71 (117)
221 PRK00174 acetyl-CoA synthetase 33.3 3.4E+02 0.0074 28.2 10.3 96 190-289 80-178 (637)
222 PLN02654 acetate-CoA ligase 32.9 1.9E+02 0.0042 30.3 8.4 80 210-290 119-201 (666)
223 PRK09162 hypoxanthine-guanine 32.7 1.3E+02 0.0028 25.5 5.7 47 67-115 14-60 (181)
224 cd02069 methionine_synthase_B1 32.5 3.4E+02 0.0074 23.7 8.9 91 232-326 87-186 (213)
225 KOG1138 Predicted cleavage and 32.3 71 0.0015 31.5 4.4 67 90-156 413-480 (653)
226 PRK11493 sseA 3-mercaptopyruva 32.3 63 0.0014 29.6 4.1 52 69-121 201-257 (281)
227 PRK02261 methylaspartate mutas 32.3 2.3E+02 0.005 22.7 6.8 92 244-342 15-119 (137)
228 COG5012 Predicted cobalamin bi 32.2 2.3E+02 0.005 24.8 7.1 83 243-327 115-205 (227)
229 PRK15407 lipopolysaccharide bi 31.6 2E+02 0.0044 28.4 7.7 56 90-149 106-166 (438)
230 cd01519 RHOD_HSP67B2 Member of 31.2 1.1E+02 0.0025 22.6 4.8 52 69-121 37-92 (106)
231 cd03466 Nitrogenase_NifN_2 Nit 31.0 3.2E+02 0.0069 26.9 9.0 56 94-150 299-358 (429)
232 PF00455 DeoRC: DeoR C termina 31.0 3E+02 0.0066 22.6 7.6 83 258-348 19-109 (161)
233 PF06543 Lac_bphage_repr: Lact 30.9 38 0.00083 21.2 1.6 22 310-331 22-43 (49)
234 cd01449 TST_Repeat_2 Thiosulfa 30.9 93 0.002 23.7 4.4 40 80-120 64-103 (118)
235 KOG0025 Zn2+-binding dehydroge 30.9 1.5E+02 0.0033 27.2 5.9 64 91-154 157-221 (354)
236 TIGR03588 PseC UDP-4-keto-6-de 30.6 2.4E+02 0.0053 27.0 8.1 63 81-147 56-126 (380)
237 TIGR03208 cyc_hxne_CoA_lg cycl 30.5 4.7E+02 0.01 26.3 10.6 96 56-156 194-298 (538)
238 COG1167 ARO8 Transcriptional r 29.8 2.3E+02 0.005 28.2 7.8 59 93-152 177-236 (459)
239 TIGR01217 ac_ac_CoA_syn acetoa 29.7 2.4E+02 0.0051 29.6 8.3 78 211-289 114-194 (652)
240 PRK08180 feruloyl-CoA synthase 29.6 4.2E+02 0.0091 27.4 10.1 99 56-156 208-318 (614)
241 cd02070 corrinoid_protein_B12- 29.6 3.6E+02 0.0079 23.1 11.1 109 215-327 64-183 (201)
242 PRK12406 long-chain-fatty-acid 29.3 5.6E+02 0.012 25.5 10.8 66 90-156 191-257 (509)
243 TIGR02370 pyl_corrinoid methyl 28.8 3.7E+02 0.0081 23.0 10.9 116 210-327 57-185 (197)
244 PRK06145 acyl-CoA synthetase; 28.8 5.8E+02 0.013 25.2 11.0 97 56-157 148-253 (497)
245 PRK05605 long-chain-fatty-acid 28.7 3E+02 0.0065 28.0 8.8 84 211-295 57-143 (573)
246 PLN02330 4-coumarate--CoA liga 28.4 4E+02 0.0086 26.9 9.6 84 210-294 54-140 (546)
247 TIGR02372 4_coum_CoA_lig 4-cou 28.3 5.5E+02 0.012 24.8 10.5 84 68-156 113-198 (386)
248 PF03744 BioW: 6-carboxyhexano 28.1 75 0.0016 28.2 3.6 41 386-441 172-222 (239)
249 PRK05851 long-chain-fatty-acid 28.1 5.5E+02 0.012 25.8 10.5 89 56-148 151-251 (525)
250 TIGR01139 cysK cysteine syntha 28.0 4.3E+02 0.0094 24.3 9.0 90 58-151 22-112 (298)
251 cd01974 Nitrogenase_MoFe_beta 27.9 3.9E+02 0.0084 26.4 9.0 31 94-125 302-332 (435)
252 PRK11761 cysM cysteine synthas 27.4 3.9E+02 0.0084 24.7 8.4 89 58-150 28-117 (296)
253 TIGR02188 Ac_CoA_lig_AcsA acet 27.2 2.4E+02 0.0053 29.1 8.0 97 190-290 70-169 (625)
254 PRK07798 acyl-CoA synthetase; 27.2 6.1E+02 0.013 25.2 10.7 84 211-295 28-114 (533)
255 PF01297 TroA: Periplasmic sol 26.9 1.6E+02 0.0034 26.5 5.7 94 72-167 127-229 (256)
256 PLN02430 long-chain-fatty-acid 26.6 6.3E+02 0.014 26.5 10.9 84 212-296 77-163 (660)
257 PRK13383 acyl-CoA synthetase; 26.4 3.7E+02 0.0081 26.9 8.9 85 211-296 60-147 (516)
258 PRK10411 DNA-binding transcrip 26.3 3.2E+02 0.0069 24.4 7.4 72 269-348 104-182 (240)
259 KOG1176 Acyl-CoA synthetase [L 26.3 2.5E+02 0.0055 28.6 7.4 88 209-297 43-135 (537)
260 PRK06702 O-acetylhomoserine am 26.2 3.3E+02 0.0073 26.8 8.1 56 92-149 97-154 (432)
261 PRK07514 malonyl-CoA synthase; 26.2 3.6E+02 0.0078 26.8 8.8 83 210-294 27-113 (504)
262 PRK08162 acyl-CoA synthetase; 26.1 3E+02 0.0066 27.7 8.3 84 211-295 43-129 (545)
263 PF01436 NHL: NHL repeat; Int 26.0 1E+02 0.0022 16.7 2.7 18 428-445 9-26 (28)
264 KOG0023 Alcohol dehydrogenase, 26.0 3.6E+02 0.0078 25.3 7.5 62 85-150 173-234 (360)
265 PLN02409 serine--glyoxylate am 26.0 5.5E+02 0.012 24.9 9.7 12 136-147 101-112 (401)
266 PF13580 SIS_2: SIS domain; PD 25.9 1.4E+02 0.003 23.9 4.6 55 71-125 80-136 (138)
267 PF00818 Ice_nucleation: Ice n 25.8 33 0.00071 16.0 0.5 9 339-347 1-9 (16)
268 PF14552 Tautomerase_2: Tautom 25.8 1.1E+02 0.0023 22.1 3.4 51 56-106 26-76 (82)
269 COG0365 Acs Acyl-coenzyme A sy 25.7 3.4E+02 0.0074 27.6 8.1 95 195-294 27-125 (528)
270 PF03808 Glyco_tran_WecB: Glyc 25.6 1.1E+02 0.0023 25.7 4.0 77 258-340 4-81 (172)
271 COG0031 CysK Cysteine synthase 25.4 3.1E+02 0.0068 25.4 7.1 58 92-150 59-116 (300)
272 PRK08751 putative long-chain f 25.4 4.6E+02 0.0099 26.6 9.5 100 56-156 207-317 (560)
273 PRK09088 acyl-CoA synthetase; 25.2 6E+02 0.013 25.1 10.1 78 211-289 22-102 (488)
274 PLN03013 cysteine synthase 24.9 4.4E+02 0.0096 25.9 8.5 81 68-151 149-230 (429)
275 KOG0633 Histidinol phosphate a 24.9 63 0.0014 29.0 2.5 70 80-150 96-168 (375)
276 PF09269 DUF1967: Domain of un 24.8 84 0.0018 21.7 2.7 29 71-100 34-62 (69)
277 cd00615 Orn_deC_like Ornithine 24.6 3.3E+02 0.0071 25.0 7.5 55 92-149 96-161 (294)
278 PRK08276 long-chain-fatty-acid 24.5 4.3E+02 0.0093 26.2 9.0 84 211-295 11-97 (502)
279 PLN02556 cysteine synthase/L-3 24.5 4.4E+02 0.0095 25.3 8.4 59 92-150 107-165 (368)
280 PRK05850 acyl-CoA synthetase; 24.4 7.1E+02 0.015 25.3 10.7 84 210-295 34-123 (578)
281 cd01448 TST_Repeat_1 Thiosulfa 24.2 2.4E+02 0.0052 21.6 5.7 39 82-121 67-106 (122)
282 PLN02723 3-mercaptopyruvate su 24.0 1.2E+02 0.0026 28.4 4.5 52 69-121 238-295 (320)
283 PRK10524 prpE propionyl-CoA sy 24.0 3.5E+02 0.0077 28.0 8.4 77 211-289 84-164 (629)
284 PF06277 EutA: Ethanolamine ut 23.7 3.7E+02 0.0081 26.7 7.6 70 38-110 353-423 (473)
285 cd06451 AGAT_like Alanine-glyo 23.6 3.2E+02 0.007 25.7 7.5 14 79-92 34-47 (356)
286 PRK07786 long-chain-fatty-acid 23.2 7.2E+02 0.016 25.0 10.4 85 69-157 193-280 (542)
287 TIGR01136 cysKM cysteine synth 23.2 5.6E+02 0.012 23.6 8.7 80 68-151 33-113 (299)
288 PRK02261 methylaspartate mutas 23.0 4E+02 0.0086 21.3 7.3 44 107-150 19-62 (137)
289 TIGR00715 precor6x_red precorr 23.0 5.7E+02 0.012 23.1 8.8 72 95-169 150-232 (256)
290 COG2351 Transthyretin-like pro 22.9 1.4E+02 0.0031 23.1 3.7 16 362-377 18-33 (124)
291 PRK05677 long-chain-fatty-acid 22.9 5.8E+02 0.013 25.9 9.7 99 56-156 206-314 (562)
292 PRK07768 long-chain-fatty-acid 22.8 6.8E+02 0.015 25.2 10.1 91 56-150 151-254 (545)
293 smart00467 GS GS motif. Aa app 22.5 40 0.00086 19.0 0.5 14 200-213 11-25 (30)
294 PRK12492 long-chain-fatty-acid 22.4 7.2E+02 0.016 25.2 10.2 100 56-156 206-321 (562)
295 cd02071 MM_CoA_mut_B12_BD meth 22.4 3.7E+02 0.0081 20.8 7.1 83 244-330 11-101 (122)
296 PF08789 PBCV_basic_adap: PBCV 22.3 82 0.0018 19.1 1.9 29 426-454 2-32 (40)
297 PF02350 Epimerase_2: UDP-N-ac 22.2 4.9E+02 0.011 24.7 8.3 101 72-177 49-161 (346)
298 COG1663 LpxK Tetraacyldisaccha 21.9 6.8E+02 0.015 23.7 9.4 155 132-292 130-295 (336)
299 PLN00011 cysteine synthase 21.8 6.4E+02 0.014 23.6 8.9 59 92-151 65-124 (323)
300 PLN02238 hypoxanthine phosphor 21.6 2.4E+02 0.0053 24.0 5.5 22 68-89 10-31 (189)
301 PRK15423 hypoxanthine phosphor 21.6 3E+02 0.0065 23.2 6.0 41 69-110 8-49 (178)
302 PRK07059 Long-chain-fatty-acid 21.3 4.6E+02 0.01 26.5 8.5 83 210-293 47-132 (557)
303 TIGR02618 tyr_phenol_ly tyrosi 21.3 4.5E+02 0.0097 26.1 7.7 68 68-141 69-166 (450)
304 TIGR01203 HGPRTase hypoxanthin 21.2 2.8E+02 0.0061 23.0 5.7 20 70-89 3-22 (166)
305 PRK05939 hypothetical protein; 21.0 4.6E+02 0.0099 25.5 7.9 55 92-148 83-137 (397)
306 PF10794 DUF2606: Protein of u 20.9 4.1E+02 0.0088 20.7 5.9 33 364-396 52-84 (131)
307 PTZ00397 macrophage migration 20.8 2.5E+02 0.0054 21.6 5.0 37 69-105 68-104 (116)
308 PF10411 DsbC_N: Disulfide bon 20.4 96 0.0021 20.4 2.2 19 422-440 32-50 (57)
309 cd01019 ZnuA Zinc binding prot 20.3 5.4E+02 0.012 23.6 7.9 81 72-155 156-241 (286)
310 KOG0257 Kynurenine aminotransf 20.2 3.6E+02 0.0079 26.1 6.6 94 38-138 43-136 (420)
311 PF08515 TGF_beta_GS: Transfor 20.2 47 0.001 18.5 0.5 14 200-213 12-26 (29)
312 PRK06381 threonine synthase; V 20.1 3.7E+02 0.008 25.1 6.9 88 58-152 32-119 (319)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=8.3e-70 Score=527.43 Aligned_cols=394 Identities=38% Similarity=0.601 Sum_probs=343.8
Q ss_pred CCC-cEEEECCC-CceecHHHHHHHHHHHHHHhHhhcC--CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCH
Q 012774 56 DDT-VALINSVT-GLRVSFSEFTRRTNSLASYLQNVTR--LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTE 131 (456)
Q Consensus 56 p~~-~A~~~~~~-~~~~Ty~eL~~~~~~~a~~L~~~~g--i~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~ 131 (456)
+++ +++++... ++.+||+|+.+++.++|..|.+ +| +++||+|++++||+++++++++||+.+|+++.+++|.+++
T Consensus 30 ~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~-~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~~~~ 108 (537)
T KOG1176|consen 30 LDRNTSLVYQDSDGRELTYSELHDRCRRLASALSE-LGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPRLTA 108 (537)
T ss_pred ccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHh-cCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcccCH
Confidence 444 67776532 5899999999999999999997 65 8999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCeEEEEccchHHHHhcc----CCeEEEEcCC----c----------hhhhhcccCCCccccccCCCCCC
Q 012774 132 SEISRQIQLSNPVIAFATSSVVHKLAKL----KHRTILIDSP----E----------FDSMTMSWNSKHELDRAKVCQSD 193 (456)
Q Consensus 132 ~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~~~~~~~~~~----~----------~~~~~~~~~~~~~~~~~~~~~~~ 193 (456)
.++.+.+++++++++|++.+...++.+. ..+++++... . +..+...... .. ......++
T Consensus 109 ~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~dd 185 (537)
T KOG1176|consen 109 SEIAKQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMPEGLP--DG-IRPVSEDD 185 (537)
T ss_pred HHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecccCccccccccccccchhhccccCCC--cc-cccCCCCC
Confidence 9999999999999999999888777532 2455554432 1 1111111111 11 34556699
Q ss_pred EEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHH-HhHhcceEEEecCCCHHH
Q 012774 194 VAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFR-AAALMETAVVMQRFDLKM 272 (456)
Q Consensus 194 ~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~-~l~~G~~~~~~~~~~~~~ 272 (456)
++.++|||||||.||||++||+++..+........ .....++.++.+|++|++|+..++. .+..|++++..+.|+++.
T Consensus 186 ~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~-~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~ 264 (537)
T KOG1176|consen 186 TAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGW-ELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAEL 264 (537)
T ss_pred eEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcc-cCCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHHH
Confidence 99999999999999999999999998877665555 5667899999999999999977776 555666666667889999
Q ss_pred HHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccc
Q 012774 273 MLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRT 352 (456)
Q Consensus 273 ~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~ 352 (456)
+++.|++|++|+++++|+++..|++.+...+.+++++|.+.+||+++++++.+++++.+|...+.+.||+||+++.++.+
T Consensus 265 ~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~ 344 (537)
T KOG1176|consen 265 FLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSN 344 (537)
T ss_pred HHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeec
Confidence 99999999999999999999999999877788999999999999999999999999999779999999999999888776
Q ss_pred cCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCC
Q 012774 353 VGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDG 432 (456)
Q Consensus 353 ~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg 432 (456)
...++ .+.+++|+++++++.++.+ ++|+.+++++.||||++|+.++.||++||+.|++.|+.+|||+|||+|++|+||
T Consensus 345 ~~~~e-~k~~svG~~~~g~~~~v~~-e~g~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG 422 (537)
T KOG1176|consen 345 DWGPE-RKPGSVGRLLPGVRVKVLD-ETGVSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDG 422 (537)
T ss_pred CCCcc-CcccccCccccceEEEeeC-CCCCCCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCC
Confidence 65555 6889999999999999888 999999999999999999999999999999999999877999999999999999
Q ss_pred cEEEecccccceeeCCeeecCCCC
Q 012774 433 FLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 433 ~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+|+|.+|++|+||.+|++|+|+|+
T Consensus 423 ~l~IvdR~KdlIk~~G~qv~P~Ei 446 (537)
T KOG1176|consen 423 YLYIVDRSKDLIKYGGEQVSPAEI 446 (537)
T ss_pred eEEEecchhhheeeCCEEeCHHHH
Confidence 999999999999999999999985
No 2
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=3.7e-67 Score=475.39 Aligned_cols=412 Identities=28% Similarity=0.360 Sum_probs=360.6
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
-|+++.+.-.+++. ||+.|.++...+.++||+|+.+.++++|.+|.+ +|+++||+|++..||+.+|+...+||.+
T Consensus 50 ~Tigq~l~~~t~~v----~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~-lGL~kGDrVgvwgpN~~~w~l~~lA~A~ 124 (596)
T KOG1177|consen 50 ETIGQLLETTTERV----PDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLS-LGLKKGDRVGVWGPNSYEWVLCQLACAR 124 (596)
T ss_pred ccHHHHHHHHhhcc----CcceEEEEeeccchhhHHHHHHHHHHHHhhHHh-hcCCCCCEEEEecCChHHHHHHHHHHHH
Confidence 79999999999999 999999998888999999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHH-----HHhc------------c------CCeEEEEcCC-----
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVH-----KLAK------------L------KHRTILIDSP----- 169 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-----~~~~------------~------~~~~~~~~~~----- 169 (456)
+|.+.+++||.+...+++..|++.+.+++|+.+.+.. .+.+ + ..+.+++.+.
T Consensus 125 AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~~~~ 204 (596)
T KOG1177|consen 125 AGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDHPLP 204 (596)
T ss_pred hceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCCcCC
Confidence 9999999999999999999999999999998764332 1110 0 1122222221
Q ss_pred ---chhhhhcccCCCc----cccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecc
Q 012774 170 ---EFDSMTMSWNSKH----ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMP 242 (456)
Q Consensus 170 ---~~~~~~~~~~~~~----~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p 242 (456)
-+.+++.....+. ........+++++.|.|||||||.||++.+||.+++++........ +..+.+++++..|
T Consensus 205 Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~-g~~e~~~i~~~~P 283 (596)
T KOG1177|consen 205 GAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARA-GYNEKHRICIPNP 283 (596)
T ss_pred CceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHh-CcCcceEEEecCc
Confidence 1444443332211 1122345779999999999999999999999999999999988888 7888889999999
Q ss_pred hhhHhhH-HHHHHHhHhcceEEEe-cCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCC
Q 012774 243 YFHIYGL-FFCFRAAALMETAVVM-QRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLG 320 (456)
Q Consensus 243 ~~~~~g~-~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~ 320 (456)
++|++|. ..+++++..|++++++ +.|++...++.|.++++|.++++|+++..|++.+.....+++++|..+.||++++
T Consensus 284 l~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~~vigGa~~s 363 (596)
T KOG1177|consen 284 LYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRKGVIGGAPVS 363 (596)
T ss_pred hHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhhhheeCCCCCC
Confidence 9999996 8889999999999996 5799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCceEeccCcccccccccccc-CCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCc
Q 012774 321 KDTIMAFASKFPKVVLVQAYGLTESTAGVFRTV-GPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTI 399 (456)
Q Consensus 321 ~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~-~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~ 399 (456)
+++.+.+.+...=..+...||+||++...+... .+.......++|+.+++.+..|+| ..|..++-|..|||+++|.+.
T Consensus 364 ~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~-~~g~~v~~~~~Gel~iRGY~t 442 (596)
T KOG1177|consen 364 PELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVD-KDGSEVPLGTKGELLIRGYST 442 (596)
T ss_pred HHHHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhccccccccccc-CCCCccccCCCceEEEEechh
Confidence 999999999774345888999999997766543 333344567999999999999999 889999999999999999999
Q ss_pred ccccCCCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 400 MKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 400 ~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+.|||++++.|.+....|.||+|||+|.+|++|+++++||.+|+|+.+|++|||.|+
T Consensus 443 Ml~Ywg~~~kT~eti~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~El 499 (596)
T KOG1177|consen 443 MLGYWGEEEKTKETIGNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTEL 499 (596)
T ss_pred heeecCCcccchhhcccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHH
Confidence 999999999999999899999999999999999999999999999999999999874
No 3
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6e-66 Score=517.43 Aligned_cols=412 Identities=33% Similarity=0.514 Sum_probs=349.0
Q ss_pred CCCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHH
Q 012774 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (456)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~ 116 (456)
.+++.+++.+.++.+ |+++|+++.....++||+||.++++++|..|++ .|+++||+|+|+++|++++++++|||+
T Consensus 10 ~~~~~~~l~~~a~~~----~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~-~~v~~gdrVail~~N~~e~~~~~~a~~ 84 (534)
T COG0318 10 ELTLASLLERAARRN----PDRPALIFLGRGGRLTYRELDRRANRLAAALQA-LGVKPGDRVAILLPNSPEFLIAFLAAL 84 (534)
T ss_pred cccHHHHHHHHHHhC----CCceEEEEcCCCceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 479999999999999 999999997333349999999999999999999 889999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhccC-----CeEEE-EcCC------chhhhhcccCCCccc
Q 012774 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK-----HRTIL-IDSP------EFDSMTMSWNSKHEL 184 (456)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~-~~~~------~~~~~~~~~~~~~~~ 184 (456)
++|++++|++|.+...++.++++.++++++++++.......... ...+. .... .++......... ..
T Consensus 85 ~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 163 (534)
T COG0318 85 RAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGDADDRLPITLEALAAEGPGP-DA 163 (534)
T ss_pred hcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEecccccccccccHHHHhhccCCc-cc
Confidence 99999999999999999999999999999999987433333211 11111 1111 233332221111 11
Q ss_pred cccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCC--CCCCcEEEEecchhhHhhHHHHH-HHhHhcce
Q 012774 185 DRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK--RVSPAVMLFTMPYFHIYGLFFCF-RAAALMET 261 (456)
Q Consensus 185 ~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~g~~~~~-~~l~~G~~ 261 (456)
......++++++++|||||||.||+|++||+++..+.......+ . ....|++++++|++|.+|+...+ ..+..|++
T Consensus 164 ~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~-~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~ 242 (534)
T COG0318 164 DARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAAL-GGGLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGT 242 (534)
T ss_pred ccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHh-cccCCCCceEEEecChHHHHHHHHHHHHHHHcCCE
Confidence 11225789999999999999999999999999999888777777 4 78889999999999999996555 55889999
Q ss_pred EEEec--CCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCC-ceEEEecCCCCCHHHHHHHHHhCCCCceEe
Q 012774 262 AVVMQ--RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSS-LETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (456)
Q Consensus 262 ~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~-lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~ 338 (456)
+++.+ .+++..++..+.++++|+++++|+++..+++.......++.+ +|.++.||+++++++++++++.|+...+.+
T Consensus 243 ~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~ 322 (534)
T COG0318 243 LVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLERFEERFGPIAILE 322 (534)
T ss_pred EEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEEecCCcCCHHHHHHHHHHhCCCceEE
Confidence 99887 599999999999999999999999999999988777666665 999999999999999999999996578999
Q ss_pred ccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCC
Q 012774 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDG 418 (456)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g 418 (456)
.||+||++..++.....+...+.+++|+|+|+++++|+|+++++.++ |++|||+++||+++.||+++|+.|.+.|..+|
T Consensus 323 ~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~~~~~~p-g~vGei~irgp~v~~GY~~~pe~t~~~f~~~g 401 (534)
T COG0318 323 GYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPDGGEVLP-GEVGEIWVRGPNVMKGYWNRPEATAEAFDEDG 401 (534)
T ss_pred eecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCCCCccCC-CCceEEEEECchhhhhhcCChHHHHHhhccCC
Confidence 99999999776664333202356778999999999999976665666 99999999999999999999999999886569
Q ss_pred eeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 419 WMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 419 ~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
||+|||+|++|+||+++|.||.+|+|+++|++|+|.|+
T Consensus 402 W~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~ei 439 (534)
T COG0318 402 WLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEI 439 (534)
T ss_pred eeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHH
Confidence 99999999999999999999999999999999999874
No 4
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.3e-65 Score=527.36 Aligned_cols=409 Identities=23% Similarity=0.311 Sum_probs=330.2
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEEC-----CCC--ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINS-----VTG--LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~-----~~~--~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~ 110 (456)
.|+.+++.+.++++ |+++|+.+. ..+ .++||+||.++++++|++|.+ +|+++||+|+|+++|+++|++
T Consensus 45 ~t~~~~l~~~a~~~----pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~Gd~Vai~~~n~~e~~~ 119 (666)
T PLN02614 45 DSCWDVFRMSVEKY----PNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRS-VGVKDEAKCGIYGANSPEWII 119 (666)
T ss_pred CcHHHHHHHHHHhC----CCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHH
Confidence 49999999999999 999999742 112 358999999999999999998 899999999999999999999
Q ss_pred HHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-C-----C-eEEEEcCC--------------
Q 012774 111 LYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-K-----H-RTILIDSP-------------- 169 (456)
Q Consensus 111 ~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-~-----~-~~~~~~~~-------------- 169 (456)
++|||+++|++++|+++.++.+++.+++++++++++|++++....+... . . .++.++..
T Consensus 120 ~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~ 199 (666)
T PLN02614 120 SMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGVSREQKEEAETFGLV 199 (666)
T ss_pred HHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccccccceEEEEeCCCChHHhhhhhhcCcE
Confidence 9999999999999999999999999999999999999987665544211 1 2 23333321
Q ss_pred --chhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCC----CCCCCCcEEEEecch
Q 012774 170 --EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS----PKRVSPAVMLFTMPY 243 (456)
Q Consensus 170 --~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~----~~~~~~~~~~~~~p~ 243 (456)
.++++....... ........++++++++|||||||.||||++||+++...+......+ .....+|++++.+|+
T Consensus 200 ~~~~~~~~~~~~~~-~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl 278 (666)
T PLN02614 200 IYAWDEFLKLGEGK-QYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPL 278 (666)
T ss_pred EEEHHHHHhhcccC-CCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccH
Confidence 122222111100 1111234578999999999999999999999999988776544332 135688999999999
Q ss_pred hhHhhHHHHHHHhHhcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCC----------------------
Q 012774 244 FHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST---------------------- 301 (456)
Q Consensus 244 ~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~---------------------- 301 (456)
+|+++......++..|+++++.+ +++..+++.|+++++|+++++|+++..+......
T Consensus 279 ~H~~~~~~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 357 (666)
T PLN02614 279 AHIFDRVIEECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFG 357 (666)
T ss_pred HHHHHHHHHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 99999865666788999988875 5899999999999999999999999987642100
Q ss_pred ---------CCC-------------CC-CCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccCCCCC
Q 012774 302 ---------DGY-------------DL-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDEC 358 (456)
Q Consensus 302 ---------~~~-------------~l-~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~ 358 (456)
... .+ +++|.+++||+++++++ ++|.+.++++++++.||+||+++..+... ....
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~~~YG~TE~~~~~~~~~-~~~~ 435 (666)
T PLN02614 358 NMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVLQGYGLTESCAGTFVSL-PDEL 435 (666)
T ss_pred HHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEEeeCchHhhhhheeeec-cccC
Confidence 000 01 68999999999999875 56667665689999999999976544322 2222
Q ss_pred CCCCccccccCCcEEEEEcCC--CCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEE
Q 012774 359 RRWGSTGRLSAGLEAKIVDPE--TGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFI 436 (456)
Q Consensus 359 ~~~~~~G~~~~~~~~~i~d~~--~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~ 436 (456)
.+.+++|+|+|+++++|+|.+ .+.++++|+.|||+|+|++++.|||++|+.|.+.| .+|||+|||+|++|+||+|+|
T Consensus 436 ~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f-~dGw~~TGDlg~~d~dG~l~i 514 (666)
T PLN02614 436 DMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGYYKREDLTKEVL-IDGWLHTGDVGEWQPNGSMKI 514 (666)
T ss_pred CcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCcccccccCCHHHhhhhh-ccCCcccceEEEEcCCCCEEE
Confidence 346899999999999999833 34678899999999999999999999999999999 589999999999999999999
Q ss_pred ecccccceee-CCeeecCCCC
Q 012774 437 VDRLKDLIKY-KGYQVLPLLN 456 (456)
Q Consensus 437 ~GR~~d~ik~-~G~~v~p~e~ 456 (456)
.||+||+||+ +|++|+|.||
T Consensus 515 ~gR~kd~ik~~~G~~V~p~eI 535 (666)
T PLN02614 515 IDRKKNIFKLSQGEYVAVENI 535 (666)
T ss_pred EEcchhceecCCCeeecHHHH
Confidence 9999999996 6999999875
No 5
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=2e-64 Score=512.06 Aligned_cols=438 Identities=41% Similarity=0.646 Sum_probs=362.1
Q ss_pred CCCCCCCCCceeeCCCCCCCCCCCCCCCCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhc
Q 012774 11 TKSGFNSATKTFHSLRPPIDLPPEDAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVT 90 (456)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~ 90 (456)
.-+.|.+..+.|.++.++.++|. +..+++.+.++.. +.+ |+++|+++...+.++||+||.++++++|+.|.++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~-~~~----~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~ 87 (560)
T PLN02574 14 PPFWYSPETGIYSSKHPPVPLPS-DPNLDAVSFIFSH-HNH----NGDTALIDSSTGFSISYSELQPLVKSMAAGLYHVM 87 (560)
T ss_pred CccccCcCCeeecCCCCCCCCCC-CCCCCHHHHHhcC-ccc----CCCCEEEECCCCCcccHHHHHHHHHHHHHHHHHHh
Confidence 33445555677777765555544 3446777777766 556 99999998755668999999999999999999647
Q ss_pred CCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhccCCeEEEEcC--
Q 012774 91 RLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDS-- 168 (456)
Q Consensus 91 gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~-- 168 (456)
|+++||+|+++++|+.+++++++||+++|++++|++|..+.+++.++++.+++++++++++....+......++.++.
T Consensus 88 G~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (560)
T PLN02574 88 GVRQGDVVLLLLPNSVYFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPLGVPVIGVPENY 167 (560)
T ss_pred CCCCCCEEEEECCCcchHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhcCCcEEecCccc
Confidence 999999999999999999999999999999999999999999999999999999999998877766554444443321
Q ss_pred ---------CchhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccC----CCCCCCCc
Q 012774 169 ---------PEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFAS----SPKRVSPA 235 (456)
Q Consensus 169 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~----~~~~~~~~ 235 (456)
..++.+...... ........++++++++|||||||.||+|+++|+++...+...... .......+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (560)
T PLN02574 168 DFDSKRIEFPKFYELIKEDFD--FVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDN 245 (560)
T ss_pred ccccCccCcccHHHHhhcCCc--ccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCc
Confidence 112222211110 111223456899999999999999999999999998877654321 11123568
Q ss_pred EEEEecchhhHhhH-HHHHHHhHhcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCC-CCCCCCCceEEE
Q 012774 236 VMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST-DGYDLSSLETVA 313 (456)
Q Consensus 236 ~~~~~~p~~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-~~~~l~~lr~v~ 313 (456)
+++..+|++|.+++ ..++.++..|+++++.+.+++..+++.|+++++|+++++|+++..|.+.... ...+++++|.++
T Consensus 246 ~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~ 325 (560)
T PLN02574 246 VYLAALPMFHIYGLSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVS 325 (560)
T ss_pred EEEEecchHHHHHHHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEE
Confidence 88999999999998 4556778889999999999999999999999999999999999999887543 345688999999
Q ss_pred ecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEE
Q 012774 314 CGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELS 393 (456)
Q Consensus 314 ~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~ 393 (456)
+||+++++++.+++++.+++.++++.||+||++...+...........+++|+|+++++++|+|++++++++.|+.|||+
T Consensus 326 ~gg~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~Gei~ 405 (560)
T PLN02574 326 CGAAPLSGKFIQDFVQTLPHVDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNCGELW 405 (560)
T ss_pred EecccCCHHHHHHHHHHCCCCcEEecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCCCeEEE
Confidence 99999999999999999988999999999999866543222233345689999999999999998889999999999999
Q ss_pred EecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 394 IRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 394 i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
|+|+.++.||+++++.+.+.|+.+|||+|||+|++|+||++++.||.||+||++|++|+|.|+
T Consensus 406 v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~ei 468 (560)
T PLN02574 406 IQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADL 468 (560)
T ss_pred EECcchhhhhcCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhheEECCEEECHHHH
Confidence 999999999999999999988889999999999999999999999999999999999999874
No 6
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=8.6e-66 Score=496.62 Aligned_cols=407 Identities=24% Similarity=0.348 Sum_probs=340.1
Q ss_pred CCCHHHHhhhc-ccCCCCCCCCCcEEEECCC---CceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHH
Q 012774 37 PISAVDYVSSL-RATLPWRDDDTVALINSVT---GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILY 112 (456)
Q Consensus 37 ~~~~~~~l~~~-~~~~~~~~p~~~A~~~~~~---~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~ 112 (456)
.+|+.....++ ..... +|+.|+++.++ .+++||+||.+.++++|+.|++..|+ +||+|++++|+.++.++++
T Consensus 7 ~lN~~~n~~dr~~~~~~---~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~ 82 (528)
T COG0365 7 TLNLALNALDRHLEADR---PDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIAL 82 (528)
T ss_pred eeechhhhhhhhhhccC---CCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHH
Confidence 35665543333 33221 68999987643 27899999999999999999875678 9999999999999999999
Q ss_pred HHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhccCC---------eEEEEcC--CchhhhhcccCCC
Q 012774 113 FSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKH---------RTILIDS--PEFDSMTMSWNSK 181 (456)
Q Consensus 113 la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~---------~~~~~~~--~~~~~~~~~~~~~ 181 (456)
|||+++|++.+|+.+.++++.+..++++++++++|+.+......+.... .+++... ..|.+.......
T Consensus 83 LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~~~~~~~~~~~~~- 161 (528)
T COG0365 83 LATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLGLWYDEAVEKASE- 161 (528)
T ss_pred HHHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEeccccccHHHHhhccCC-
Confidence 9999999999999999999999999999999999998776654332111 1333322 334444433221
Q ss_pred ccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhH-HHHHHHhHhcc
Q 012774 182 HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALME 260 (456)
Q Consensus 182 ~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~ 260 (456)
..+......+++++++|||||||+||+|+++|..+...............++|++++..++.|+.|. ..++.++..|+
T Consensus 162 -~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~~Ga 240 (528)
T COG0365 162 -KFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSVFSPLASGA 240 (528)
T ss_pred -CCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHHHHHHHhcCC
Confidence 2223347889999999999999999999999998877776666544356799999999999999999 55899999999
Q ss_pred eEEEecC--C-CHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceE
Q 012774 261 TAVVMQR--F-DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLV 337 (456)
Q Consensus 261 ~~~~~~~--~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~ 337 (456)
+.++.+. + +++.+++.|+++++|.++++|+.++.|++......+++++||.+.++|||++++.++++.+.+ +++|.
T Consensus 241 t~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~SaGEPLnpe~~~w~~~~~-g~~i~ 319 (528)
T COG0365 241 TTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSAGEPLNPEAFEWFYSAL-GVWIL 319 (528)
T ss_pred eEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhheeeeccCCCCCHHHHHHHHHHh-CCCEe
Confidence 9998853 2 499999999999999999999999999998766678899999999999999999999999999 79999
Q ss_pred eccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecC--CcccccCCCccccccccC
Q 012774 338 QAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGP--TIMKGYVGEPEVTSATLL 415 (456)
Q Consensus 338 ~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~--~~~~gy~~~~~~~~~~~~ 415 (456)
+.||+||+|.+...... ..+.++.|+|+||+++.++|++ |+++++|+ |+|+++.+ +++++||++++.+.+.+.
T Consensus 320 d~~gqTEtg~~~~~~~~---~~~~g~~g~p~pG~~~~vvdd~-g~~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~ 394 (528)
T COG0365 320 DIYGQTETGMGFIAGRP---PVKNGSSGLPLPGYAVRRVDDE-GNPVPPGV-GELVVRLPWPGMALTYWNDPERYKEAYF 394 (528)
T ss_pred ccccccccCccccCCCC---CcCCCCCCCCCCCceeEEECCC-CCcCCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHh
Confidence 99999999955544222 3345666999999999999955 99999999 99999987 889999999999999885
Q ss_pred CCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 416 PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 416 ~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
.. ||.|||.+++|+||+++|+||.||+||+.|+||.|+|+
T Consensus 395 ~~-~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~Ev 434 (528)
T COG0365 395 GR-WYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEI 434 (528)
T ss_pred hc-eeecCceeEEccCCCEEEEeeccceEeccCeeccHHHH
Confidence 44 99999999999999999999999999999999999885
No 7
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5e-65 Score=521.86 Aligned_cols=427 Identities=20% Similarity=0.238 Sum_probs=342.8
Q ss_pred eeeCCCCCCCCCCCCCCCCHHHHhhhcccCCCCCCCCCcEEEECCC---CceecHHHHHHHHHHHHHHhHhh--cCCCCC
Q 012774 21 TFHSLRPPIDLPPEDAPISAVDYVSSLRATLPWRDDDTVALINSVT---GLRVSFSEFTRRTNSLASYLQNV--TRLSKN 95 (456)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~---~~~~Ty~eL~~~~~~~a~~L~~~--~gi~~g 95 (456)
.|+........+. ....++.++|.+.++++ |+++|+++... .+++||+||.++++++|++|.+. +|+++|
T Consensus 45 ~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~----p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g 119 (746)
T PTZ00342 45 VYCMKDHKKKSSL-YVYKHIMKLLLEKYKLN----NNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEK 119 (746)
T ss_pred ceecCchhhcccc-cccchHHHHHHHHHhhc----CCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcC
Confidence 4555444333332 33579999999999999 99999987422 36899999999999999999972 499998
Q ss_pred -----------CEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhc----c-
Q 012774 96 -----------DTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK----L- 159 (456)
Q Consensus 96 -----------d~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~----~- 159 (456)
|+|+|+++|+++|+++.+||+++|++.||+++.++.+++.++++++++++++++.+..+.+.+ .
T Consensus 120 ~~~~~~~~g~~d~V~i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~ 199 (746)
T PTZ00342 120 KYNEEQNNGKFKLLGLYGSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELP 199 (746)
T ss_pred ccccccccccccEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCC
Confidence 999999999999999999999999999999999999999999999999999998777666542 1
Q ss_pred CC-eEEEEcCCch--------------------------------------------------------hhhhcccCC--
Q 012774 160 KH-RTILIDSPEF--------------------------------------------------------DSMTMSWNS-- 180 (456)
Q Consensus 160 ~~-~~~~~~~~~~--------------------------------------------------------~~~~~~~~~-- 180 (456)
.. .+++++.... .++......
T Consensus 200 ~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 279 (746)
T PTZ00342 200 HLKKLIILDTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLG 279 (746)
T ss_pred CceEEEEECCCCcccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCC
Confidence 11 2444443110 000000000
Q ss_pred -------------CccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCC-CCCCCcEEEEecchhhH
Q 012774 181 -------------KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP-KRVSPAVMLFTMPYFHI 246 (456)
Q Consensus 181 -------------~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~ 246 (456)
..........++++++++|||||||.||||++||+++.+.+........ .....+++++.+|++|+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi 359 (746)
T PTZ00342 280 ISIILFDDMTKNKTTNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHI 359 (746)
T ss_pred CEEEEHHHHHhhcccCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHH
Confidence 0000112346789999999999999999999999999988765543210 12356899999999999
Q ss_pred hhHHHHHHHhHhcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcC--------CCCCC---------------
Q 012774 247 YGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKG--------GSTDG--------------- 303 (456)
Q Consensus 247 ~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~--------~~~~~--------------- 303 (456)
+++...+.++..|+++++.+. ++..+++.|+++++|+++++|.++.++... .....
T Consensus 360 ~~~~~~~~~l~~G~~i~~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~ 438 (746)
T PTZ00342 360 YERVIAYLSFMLGGTINIWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNN 438 (746)
T ss_pred HHHHHHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhc
Confidence 999777888999999998865 899999999999999999999999988652 10000
Q ss_pred -------------------CCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccCCCCCCCCCcc
Q 012774 304 -------------------YDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGST 364 (456)
Q Consensus 304 -------------------~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~ 364 (456)
...+++|.+++||+++++++.+.|+..+ ++++++.||+||+++.++... ......+++
T Consensus 439 ~~~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~-g~~i~~gYGlTEt~~~~~~~~--~~~~~~gsv 515 (746)
T PTZ00342 439 GGFSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLL-NVNYYQGYGLTETTGPIFVQH--ADDNNTESI 515 (746)
T ss_pred CCcchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhc-CCCEEEeeccCcccceeeecc--CCCCCcccc
Confidence 0026899999999999999999999888 899999999999987665432 223467899
Q ss_pred cccc-CCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEecccccc
Q 012774 365 GRLS-AGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDL 443 (456)
Q Consensus 365 G~~~-~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ 443 (456)
|+|+ |+++++|+|.++......+..|||+++||+++.|||++|+.|++.|+.||||+|||+|++|+||+|+|+||+||+
T Consensus 516 G~p~~pg~e~ki~d~~~~~~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~dG~l~i~gR~kdl 595 (746)
T PTZ00342 516 GGPISPNTKYKVRTWETYKATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINKNGSLTFLDRSKGL 595 (746)
T ss_pred cCcCCCcEEEEEecccccccCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECCCCeEEEEccCCCe
Confidence 9998 999999998555444455567999999999999999999999999988999999999999999999999999999
Q ss_pred eee-CCeeecCCCC
Q 012774 444 IKY-KGYQVLPLLN 456 (456)
Q Consensus 444 ik~-~G~~v~p~e~ 456 (456)
||+ +|++|+|.|+
T Consensus 596 Ikls~Ge~I~p~eI 609 (746)
T PTZ00342 596 VKLSQGEYIETDML 609 (746)
T ss_pred EEeCCCEEEchHHH
Confidence 996 6999999874
No 8
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.6e-63 Score=513.08 Aligned_cols=411 Identities=23% Similarity=0.260 Sum_probs=337.5
Q ss_pred CCCCCHHHHhhhcccCCCCCCCCCcEEEE---CCC----CceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCc
Q 012774 35 DAPISAVDYVSSLRATLPWRDDDTVALIN---SVT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE 107 (456)
Q Consensus 35 ~~~~~~~~~l~~~~~~~~~~~p~~~A~~~---~~~----~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~ 107 (456)
....++++++...++.+ |+++|+.. .+. .+.+||+||.++++++|++|.+ +|+++||+|+|+++|+++
T Consensus 41 ~~~~tl~~~l~~~a~~~----p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~-~Gv~~gd~Vai~~~n~~e 115 (651)
T PLN02736 41 PEIGTLHDNFVYAVETF----RDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQ-HGIPKGACVGLYFINRPE 115 (651)
T ss_pred CCCCCHHHHHHHHHHhC----CCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHH
Confidence 34469999999999999 99999842 111 2469999999999999999998 999999999999999999
Q ss_pred HHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-----CCe-EEEEcCC------------
Q 012774 108 IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHR-TILIDSP------------ 169 (456)
Q Consensus 108 ~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-----~~~-~~~~~~~------------ 169 (456)
|+++++||+++|++++|+++.++.+++.+++++++++++|++++....+... ..+ +++++..
T Consensus 116 ~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~ 195 (651)
T PLN02736 116 WLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTG 195 (651)
T ss_pred HHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCchhhhhhhccCC
Confidence 9999999999999999999999999999999999999999998776654321 122 2333211
Q ss_pred ----chhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhh
Q 012774 170 ----EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFH 245 (456)
Q Consensus 170 ----~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 245 (456)
.++++....... ........++++++++|||||||.||||++||+++..++......+ ...++|++++.+|++|
T Consensus 196 ~~~~~~~~~~~~~~~~-~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~-~~~~~d~~l~~lPl~h 273 (651)
T PLN02736 196 VEIVTYSKLLAQGRSS-PQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLST-KFYPSDVHISYLPLAH 273 (651)
T ss_pred cEEEEHHHHHHhcccC-CCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhcc-CCCCCCEEEEeCCHHH
Confidence 122222211100 1112234678999999999999999999999999998888777666 6788999999999999
Q ss_pred HhhHHHHHHHhHhcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCC-------------------------
Q 012774 246 IYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS------------------------- 300 (456)
Q Consensus 246 ~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~------------------------- 300 (456)
.+++...+.++..|+++++.+. ++..+++.|+++++|+++++|.++..+.+...
T Consensus 274 ~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (651)
T PLN02736 274 IYERVNQIVMLHYGVAVGFYQG-DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQAL 352 (651)
T ss_pred HHHHHHHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 9999888889999999988765 78899999999999999999999988755310
Q ss_pred ---CCC-------------CCC-CCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccCCCCCCCCCc
Q 012774 301 ---TDG-------------YDL-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGS 363 (456)
Q Consensus 301 ---~~~-------------~~l-~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~ 363 (456)
... ..+ +++|.+++||+++++++.+.+++.+ ++++++.||+||+++.++... ......++
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~-g~~~~~~YG~TE~~~~~~~~~--~~~~~~~~ 429 (651)
T PLN02736 353 ENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICF-GGRVLEGYGMTETSCVISGMD--EGDNLSGH 429 (651)
T ss_pred HcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHh-CCCeEEEechHHhchheeccC--CCCCCCCc
Confidence 000 011 4899999999999999999999888 789999999999987655432 22245689
Q ss_pred cccccCCcEEEEEcCCCCC---CCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEeccc
Q 012774 364 TGRLSAGLEAKIVDPETGD---SLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRL 440 (456)
Q Consensus 364 ~G~~~~~~~~~i~d~~~~~---~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~ 440 (456)
+|+|+|+++++|+|.+++. ...++..|||+++||+++.||+++++.+.+.|+.+|||+|||+|++|+||+|+|.||.
T Consensus 430 vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~dG~l~i~GR~ 509 (651)
T PLN02736 430 VGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWLPGGRLKIIDRK 509 (651)
T ss_pred cCCccCceEEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEcCCCcEEEEEec
Confidence 9999999999999844332 2334457999999999999999999999999988999999999999999999999999
Q ss_pred ccceee-CCeeecCCCC
Q 012774 441 KDLIKY-KGYQVLPLLN 456 (456)
Q Consensus 441 ~d~ik~-~G~~v~p~e~ 456 (456)
||+||+ +|++|+|.||
T Consensus 510 kd~ik~~~G~~V~p~eI 526 (651)
T PLN02736 510 KNIFKLAQGEYIAPEKI 526 (651)
T ss_pred hhheEcCCCcEechHHH
Confidence 999997 6999999875
No 9
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=8e-64 Score=514.41 Aligned_cols=408 Identities=23% Similarity=0.311 Sum_probs=327.5
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEEC-----C--CCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINS-----V--TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~-----~--~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~ 110 (456)
.|+.+++.+.++++ |+++|+... . ..+++||+||.++++++|++|.+ +|+++||+|+|+++|+++|++
T Consensus 43 ~t~~~~l~~~~~~~----p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~gd~Vai~~~n~~e~~~ 117 (660)
T PLN02861 43 DSPWQFFSDAVKKY----PNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRS-RGVNPGDRCGIYGSNCPEWII 117 (660)
T ss_pred CCHHHHHHHHHHhC----CCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHH
Confidence 58999999999999 999999641 1 12579999999999999999998 899999999999999999999
Q ss_pred HHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhc----c--CCe-EEEEcCC--------------
Q 012774 111 LYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK----L--KHR-TILIDSP-------------- 169 (456)
Q Consensus 111 ~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~----~--~~~-~~~~~~~-------------- 169 (456)
+++||+++|++++|+++.++.+++.+++++++++++|++++....+.. . ..+ ++.++..
T Consensus 118 ~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~ 197 (660)
T PLN02861 118 AMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVS 197 (660)
T ss_pred HHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcE
Confidence 999999999999999999999999999999999999998766554422 1 122 3333321
Q ss_pred --chhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCC----CCCCCcEEEEecch
Q 012774 170 --EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP----KRVSPAVMLFTMPY 243 (456)
Q Consensus 170 --~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~----~~~~~~~~~~~~p~ 243 (456)
+++++...... ........++++++++|||||||.||||++||++++..+......+. ....+|++++.+|+
T Consensus 198 ~~~~~~~~~~~~~--~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl 275 (660)
T PLN02861 198 CFSWEEFSLMGSL--DCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPL 275 (660)
T ss_pred EEEHHHHHHhCcc--cCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcH
Confidence 12222221110 11122345789999999999999999999999999987766544331 14678999999999
Q ss_pred hhHhhHHHHHHHhHhcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCC------------------------
Q 012774 244 FHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGG------------------------ 299 (456)
Q Consensus 244 ~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~------------------------ 299 (456)
+|++++...+.++..|+++++.. +++..+++.|+++++|+++++|.++..+....
T Consensus 276 ~H~~~~~~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~ 354 (660)
T PLN02861 276 AHVYDQVIETYCISKGASIGFWQ-GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLG 354 (660)
T ss_pred HHHHHHHHHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 99999866667899999988874 58999999999999999999999999886410
Q ss_pred ------CC---CC-C----------CC-CCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccCCCCC
Q 012774 300 ------ST---DG-Y----------DL-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDEC 358 (456)
Q Consensus 300 ------~~---~~-~----------~l-~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~ 358 (456)
.. .. . .+ .++|.+++||+++++++. +|.+.++...+++.||+||+++.++.... ...
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~-~~~~~~~~~~l~~~YG~TE~~~~~~~~~~-~~~ 432 (660)
T PLN02861 355 NLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVE-EFLRVTSCSVLSQGYGLTESCGGCFTSIA-NVF 432 (660)
T ss_pred HHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH-HHHHHHcCCCeeEecchhhhhhceeeccc-ccC
Confidence 00 00 0 11 579999999999999975 46666644579999999999765543222 222
Q ss_pred CCCCccccccCCcEEEEEcC-CCC-CCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEE
Q 012774 359 RRWGSTGRLSAGLEAKIVDP-ETG-DSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFI 436 (456)
Q Consensus 359 ~~~~~~G~~~~~~~~~i~d~-~~~-~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~ 436 (456)
...+++|+|+|+++++|+|. +.| ..++++..|||+++|++++.|||++|+.|.+.| .+|||+|||+|++|+||+|+|
T Consensus 433 ~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f-~dGw~~TGDlg~~d~dG~l~i 511 (660)
T PLN02861 433 SMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSGYHKRQDLTEEVL-IDGWFHTGDIGEWQPNGAMKI 511 (660)
T ss_pred CCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEcCCcccccccCCHHHHHhhh-hccCcccCceEEECCCCcEEE
Confidence 34689999999999999983 333 344566789999999999999999999999999 589999999999999999999
Q ss_pred ecccccceee-CCeeecCCCC
Q 012774 437 VDRLKDLIKY-KGYQVLPLLN 456 (456)
Q Consensus 437 ~GR~~d~ik~-~G~~v~p~e~ 456 (456)
.||+||+||+ +|++|+|.||
T Consensus 512 ~GR~kd~Ik~~~G~~I~p~eI 532 (660)
T PLN02861 512 IDRKKNIFKLSQGEYVAVENL 532 (660)
T ss_pred EeccccceEcCCCeEEcHHHH
Confidence 9999999997 6999999874
No 10
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.6e-63 Score=502.24 Aligned_cols=408 Identities=22% Similarity=0.254 Sum_probs=341.1
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
.++.+.+.+.++++ |+++|+.+.. ..++||+||.++++++|+.|.+ .+||+|+++++|++++++++|||++
T Consensus 19 ~~~~~~~~~~~~~~----p~~~a~~~~~-~~~~Ty~el~~~~~~lA~~L~~----~~gd~Val~~~n~~e~~~~~lA~~~ 89 (539)
T PRK06334 19 KTVLESFLKLCSEM----TTATVCWDEQ-LGKLSYNQVRKAVIALATKVSK----YPDQHIGIMMPASAGAYIAYFATLL 89 (539)
T ss_pred CcHHHHHHHHHHhC----CCceEEEeCC-CCcccHHHHHHHHHHHHHHHhh----ccCCeEEEEcCCchHHHHHHHHHHh
Confidence 58999999999999 9999998752 3689999999999999999987 3899999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-------CCeEEEEcCCc----hhhhhccc---CCCc-
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-------KHRTILIDSPE----FDSMTMSW---NSKH- 182 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-------~~~~~~~~~~~----~~~~~~~~---~~~~- 182 (456)
+|++++|+++..+.+++.++++.+++++++++++....+.+. ...++.++... +....... ....
T Consensus 90 ~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (539)
T PRK06334 90 SGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRKELSFWEKCRIGIYMSIPFE 169 (539)
T ss_pred cCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhhhccHHHhhhhhhhhcCCch
Confidence 999999999999999999999999999999998776655432 11233332110 00100000 0000
Q ss_pred ----cccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhH-HHHHHHhH
Q 012774 183 ----ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAA 257 (456)
Q Consensus 183 ----~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~ 257 (456)
........++++++++|||||||.||+|+++|+++..+.......+ ....+|++++.+|++|.+++ ..++.++.
T Consensus 170 ~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~-~~~~~d~~l~~~p~~h~~g~~~~~~~~l~ 248 (539)
T PRK06334 170 WLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFF-SPKEDDVMMSFLPPFHAYGFNSCTLFPLL 248 (539)
T ss_pred hhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhc-CCCCCceEEEecchHhhhhhHHHHHHHHH
Confidence 0011234678999999999999999999999999988877666655 57789999999999999998 45778899
Q ss_pred hcceEEEec-CCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCce
Q 012774 258 LMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVL 336 (456)
Q Consensus 258 ~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i 336 (456)
.|+++++.. .+++..+++.|+++++|++.++|+++..|++........++++|.+++||+++++++.+++++.+++..+
T Consensus 249 ~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i 328 (539)
T PRK06334 249 SGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKDSLYQEALKTFPHIQL 328 (539)
T ss_pred cCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCHHHHHHHHHHCCCCeE
Confidence 999998875 5799999999999999999999999999988765555678999999999999999999999999988999
Q ss_pred EeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCcccccccc-C
Q 012774 337 VQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATL-L 415 (456)
Q Consensus 337 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~-~ 415 (456)
++.||+||++.+++.... ......+++|+|+++++++|+|++++.++++|+.|||+|+|+.++.||+++++.+.... .
T Consensus 329 ~~~YG~TE~~~~~~~~~~-~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~ 407 (539)
T PRK06334 329 RQGYGTTECSPVITINTV-NSPKHESCVGMPIRGMDVLIVSEETKVPVSSGETGLVLTRGTSLFSGYLGEDFGQGFVELG 407 (539)
T ss_pred EecccccccCceEEeccC-CCCCCCCcCceecCCCEEEEEcCCCCccCCCCceEEEEEecCcccccccCCcccccceeeC
Confidence 999999999876654322 22233467999999999999997778999999999999999999999999988654322 3
Q ss_pred CCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 416 PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 416 ~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
.+|||+|||+|++|++|+++|.||.||+||++|++|+|.||
T Consensus 408 ~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eI 448 (539)
T PRK06334 408 GETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEAL 448 (539)
T ss_pred CceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHH
Confidence 46899999999999999999999999999999999999875
No 11
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=2.4e-63 Score=485.87 Aligned_cols=397 Identities=31% Similarity=0.430 Sum_probs=324.9
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECC--CCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSV--TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~--~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~ 115 (456)
.++..++.++++.+ |+.+|+.... ..+.+||+|+.+++.++|++|++ +|+..||+|+|++.|+++|+++.+||
T Consensus 16 ~~~~~~~~~~~~~~----~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~-lg~~~gdrvai~a~nr~eW~i~d~a~ 90 (613)
T COG1022 16 HTLPKRLAERVKDR----PDGVALMYKELGGWEAITYRELYERVRALASGLLS-LGIPAGDRVAIFAANRPEWAIADLAI 90 (613)
T ss_pred ccHHHHHHHHhhcC----CcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 58899999999999 8888987653 24789999999999999999999 99977999999999999999999999
Q ss_pred HHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchH-HHHhccCC--e-E---E-EEc---------CCchhhhhccc
Q 012774 116 LSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV-HKLAKLKH--R-T---I-LID---------SPEFDSMTMSW 178 (456)
Q Consensus 116 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-~~~~~~~~--~-~---~-~~~---------~~~~~~~~~~~ 178 (456)
+.+|++.||+.+..++++++++|++++++++|++.... +.+..... . + . ..+ ...++......
T Consensus 91 ~~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (613)
T COG1022 91 LALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDEG 170 (613)
T ss_pred HHcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchhhcccccccccc
Confidence 99999999999999999999999999999999987443 33331111 0 0 0 000 00011100000
Q ss_pred CC-------CccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHH
Q 012774 179 NS-------KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFF 251 (456)
Q Consensus 179 ~~-------~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~ 251 (456)
.. .......+..++|+|.++|||||||.||||++||+|+++++....+..+...++|++++.+|+.|++...+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaHi~Er~~ 250 (613)
T COG1022 171 ISLFLIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAHIFERAF 250 (613)
T ss_pred chhhhhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHHHHHHHH
Confidence 00 00111235678999999999999999999999999999999999998832789999999999999999865
Q ss_pred HHHHhHhcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCC----C-------------------------
Q 012774 252 CFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST----D------------------------- 302 (456)
Q Consensus 252 ~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~----~------------------------- 302 (456)
. ..+..++........++..+++.+++.+||.++++|.+|+.+-+.... .
T Consensus 251 ~-~~~~~~~g~~~~~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~~~~ 329 (613)
T COG1022 251 E-GGLALYGGVTVLFKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRALLG 329 (613)
T ss_pred H-HHHHhhcceEEEecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhhcc
Confidence 3 333333334444445799999999999999999999999866432110 0
Q ss_pred -C----------------C-CC-CCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccCCCCCCCCCc
Q 012774 303 -G----------------Y-DL-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGS 363 (456)
Q Consensus 303 -~----------------~-~l-~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~ 363 (456)
. . .+ .++|++++||+++++++...++.. ++++.++||+||+++.++.. ++.....++
T Consensus 330 ~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l--Gi~i~eGYGlTEts~~~~v~--~~~~~~~gt 405 (613)
T COG1022 330 GGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL--GIPILEGYGLTETSAVVSVN--PPDRFVLGT 405 (613)
T ss_pred cCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc--CCCeEEEecccccccceEEc--cccCcccCC
Confidence 0 0 11 378999999999999999999998 89999999999999888773 455567899
Q ss_pred cccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEecccccc
Q 012774 364 TGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDL 443 (456)
Q Consensus 364 ~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ 443 (456)
+|+|+|+++++|+| .|||+|+||.+++|||++|+.|.+.|++||||+|||+|.+|++|+|++.||++|+
T Consensus 406 vG~p~p~~evKI~d-----------~GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~~g~L~i~gRkK~~ 474 (613)
T COG1022 406 VGKPLPGIEVKIAD-----------DGEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDEDGYLVITGRKKEL 474 (613)
T ss_pred cCCcCCCceEEEcc-----------CceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcCCCcEEEeecccce
Confidence 99999999999998 3999999999999999999999999999999999999999999999999999999
Q ss_pred eee-CCeeecCCC
Q 012774 444 IKY-KGYQVLPLL 455 (456)
Q Consensus 444 ik~-~G~~v~p~e 455 (456)
||. +|++|.|..
T Consensus 475 i~l~~GknIaP~~ 487 (613)
T COG1022 475 IKLSNGKNIAPEP 487 (613)
T ss_pred EECCCCcccChHH
Confidence 998 599999964
No 12
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=9.9e-62 Score=490.53 Aligned_cols=425 Identities=38% Similarity=0.592 Sum_probs=359.7
Q ss_pred eeeCCCCCCCCCCCCCCCCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEE
Q 012774 21 TFHSLRPPIDLPPEDAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFV 100 (456)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l 100 (456)
.|++.++....|. .+|+.+++.++++++ |+++|+++...++++||.||.++++++|+.|.+ .|+++||+|++
T Consensus 9 ~~~~~~~~~~~~~---~~~~~~~l~~~~~~~----~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~-~g~~~gd~V~i 80 (537)
T PLN02246 9 IFRSKLPDIYIPN---HLPLHDYCFERLSEF----SDRPCLIDGATGRVYTYADVELLSRRVAAGLHK-LGIRQGDVVML 80 (537)
T ss_pred EecCCCCCCCCCC---CCcHHHHHHHHHHhC----CCCeEEEecCCCceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEE
Confidence 3445555444433 379999999999998 999999986556899999999999999999998 89999999999
Q ss_pred EcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc----CCeEEEEcCCc-----h
Q 012774 101 LSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHRTILIDSPE-----F 171 (456)
Q Consensus 101 ~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~~~~~~~~~~~-----~ 171 (456)
+++|+++++++++||+++|++++|+++..+.+++..+++.++++++|+++.....+... ...++.++... +
T Consensus 81 ~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 160 (537)
T PLN02246 81 LLPNCPEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAEDDGVTVVTIDDPPEGCLHF 160 (537)
T ss_pred ECCCChHHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhcCCceEEEeCCCCCCceeH
Confidence 99999999999999999999999999999999999999999999999998776655432 23444444221 2
Q ss_pred hhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhcc----CCCCCCCCcEEEEecchhhHh
Q 012774 172 DSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFA----SSPKRVSPAVMLFTMPYFHIY 247 (456)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~----~~~~~~~~~~~~~~~p~~~~~ 247 (456)
.++..... .........++++++++|||||||.||+|+++|+++......... .+ .+..+|++++.+|++|.+
T Consensus 161 ~~~~~~~~--~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~-~~~~~d~~l~~~pl~~~~ 237 (537)
T PLN02246 161 SELTQADE--NELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNL-YFHSDDVILCVLPMFHIY 237 (537)
T ss_pred HHHhcCCC--CCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhcccccc-CCCCCcEEEEeechHHHH
Confidence 22221111 111223346789999999999999999999999999887765433 23 568899999999999999
Q ss_pred hH-HHHHHHhHhcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHH
Q 012774 248 GL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMA 326 (456)
Q Consensus 248 g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~ 326 (456)
++ ..++.++..|+++++.+.+++..+++.|+++++|++.++|+++..|.+........++++|.+++||+++++++.+.
T Consensus 238 ~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~ 317 (537)
T PLN02246 238 SLNSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPLGKELEDA 317 (537)
T ss_pred HHHHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecCcCCHHHHHH
Confidence 98 55678899999999999999999999999999999999999999998876655567889999999999999999999
Q ss_pred HHHhCCCCceEeccCccccccccccccC---CCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCccccc
Q 012774 327 FASKFPKVVLVQAYGLTESTAGVFRTVG---PDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGY 403 (456)
Q Consensus 327 ~~~~~~~~~i~~~yG~tE~~~~~~~~~~---~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy 403 (456)
+++.+++..+.+.||+||++.+++.+.. .......+++|+|+++++++|+|++++++++.|+.|||+++|+.++.||
T Consensus 318 ~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY 397 (537)
T PLN02246 318 FRAKLPNAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQPGEICIRGPQIMKGY 397 (537)
T ss_pred HHHHcCCCeEeccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCceEEEEECCchhccc
Confidence 9999988999999999999876543211 1112345789999999999999977899999999999999999999999
Q ss_pred CCCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 404 VGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 404 ~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+++++.+...+..++||+|||+|+++++|++++.||.||+||++|++|+|.||
T Consensus 398 ~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eI 450 (537)
T PLN02246 398 LNDPEATANTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAEL 450 (537)
T ss_pred cCCchhhhhcccCCCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHHH
Confidence 99999999988788999999999999999999999999999999999999774
No 13
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=2e-62 Score=497.70 Aligned_cols=406 Identities=25% Similarity=0.326 Sum_probs=338.0
Q ss_pred CCCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHH
Q 012774 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (456)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~ 116 (456)
+.|+.++|.+.++++ |+++|+++. ++++||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||+
T Consensus 6 ~~~~~~~~~~~~~~~----p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~-~Gv~~gd~V~v~~~n~~~~~~~~la~~ 78 (563)
T PLN02860 6 QAHICQCLTRLATLR----GNAVVTISG--NRRRTGHEFVDGVLSLAAGLLR-LGLRNGDVVAIAALNSDLYLEWLLAVA 78 (563)
T ss_pred hhHHHHHHHHHHHhc----CCceEEecC--CceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHHHHHHh
Confidence 379999999999999 999999986 7899999999999999999999 899999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHH---HHh--ccC-Ce-EEEEcCCc------hhhhhcccCC---
Q 012774 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVH---KLA--KLK-HR-TILIDSPE------FDSMTMSWNS--- 180 (456)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---~~~--~~~-~~-~~~~~~~~------~~~~~~~~~~--- 180 (456)
++|++++|+++.++.+++.+++++++++++++++.... .+. ... .. .+..+... +..+......
T Consensus 79 ~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (563)
T PLN02860 79 CAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVFIFLNSFLTTEMLKQR 158 (563)
T ss_pred hccEEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCcccccccchhhccccchhccC
Confidence 99999999999999999999999999999999875422 221 111 11 12222111 1111110000
Q ss_pred --CccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHh
Q 012774 181 --KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAAL 258 (456)
Q Consensus 181 --~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~ 258 (456)
..........++++++++|||||||.||+|+++|+++..+.......+ ...++|+++..+|++|.+++...+.++..
T Consensus 159 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~-~~~~~d~~l~~~pl~h~~g~~~~~~~l~~ 237 (563)
T PLN02860 159 ALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIV-GYGEDDVYLHTAPLCHIGGLSSALAMLMV 237 (563)
T ss_pred ccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhc-CCCCCCEEEEecCchhhccHHHHHHHHHc
Confidence 000111234568999999999999999999999999987766655555 67788999999999999999888899999
Q ss_pred cceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCC--CCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCce
Q 012774 259 METAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVL 336 (456)
Q Consensus 259 G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i 336 (456)
|+++++.+.+++..+++.|+++++|+++++|+++..|++.... ....++++|.+++||+++++++.+.|++.|++.++
T Consensus 238 G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~ 317 (563)
T PLN02860 238 GACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAKL 317 (563)
T ss_pred CceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhcCCCce
Confidence 9999999999999999999999999999999999999875432 22457899999999999999999999999988999
Q ss_pred EeccCccccccccccccCCC---------------------CCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEe
Q 012774 337 VQAYGLTESTAGVFRTVGPD---------------------ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIR 395 (456)
Q Consensus 337 ~~~yG~tE~~~~~~~~~~~~---------------------~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~ 395 (456)
++.||+||++..+....... ......++|+|+++++++|++++ +|+.|||+++
T Consensus 318 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~------~g~~Gel~v~ 391 (563)
T PLN02860 318 FSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGLDE------SSRVGRILTR 391 (563)
T ss_pred ecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEEEEecCC------CCceeEEEEe
Confidence 99999999976544321111 01112368999999999999843 5789999999
Q ss_pred cCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 396 GPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 396 g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
|+.++.||+++++.+.+.+..+|||+|||+|++|+||+++|.||.||+||++|++|+|.||
T Consensus 392 g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~eI 452 (563)
T PLN02860 392 GPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEEV 452 (563)
T ss_pred cCcccccccCCccccchhccCCCeEEccceEEEcCCCCEEEeecccceeEECCEEccHHHH
Confidence 9999999999999999988889999999999999999999999999999999999999874
No 14
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=1.6e-62 Score=472.78 Aligned_cols=412 Identities=25% Similarity=0.373 Sum_probs=344.2
Q ss_pred CCCCCHHHHhhhcccCCCCCCCCCcEEEECC------CCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcH
Q 012774 35 DAPISAVDYVSSLRATLPWRDDDTVALINSV------TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEI 108 (456)
Q Consensus 35 ~~~~~~~~~l~~~~~~~~~~~p~~~A~~~~~------~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~ 108 (456)
+...|+++.+.+.+..+ ++.+++-.-. ..+.+||.|..+++.+++..|++ +|+++++.|+|+..|++||
T Consensus 72 ~~~~T~~~~f~~~~~~~----~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~-lG~~~~~~VGIy~~N~pEW 146 (691)
T KOG1256|consen 72 DGPLTLYEGFRRSVEKS----GNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRK-LGVKEDSKVGIYAFNRPEW 146 (691)
T ss_pred CCcccHHHHhhcchhcc----CCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHH-hCCCCCceEEEeccCChhh
Confidence 56789999999999999 9999985432 24789999999999999999997 9999999999999999999
Q ss_pred HHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEc-cchHHHHhcc-------CCe-EEEEcCC----------
Q 012774 109 PILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFAT-SSVVHKLAKL-------KHR-TILIDSP---------- 169 (456)
Q Consensus 109 ~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~-~~~~~~~~~~-------~~~-~~~~~~~---------- 169 (456)
+++.+||...|.+.|||...++++.+.++++++++.+++++ ++....+.+. .++ ++.++..
T Consensus 147 iis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~~~~ 226 (691)
T KOG1256|consen 147 IISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPSDELKEKAEN 226 (691)
T ss_pred HHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCchhhhhhhhc
Confidence 99999999999999999999999999999999999999999 5555554421 122 2333322
Q ss_pred ------chhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHH---hccCCC--CCCCCcEEE
Q 012774 170 ------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVAS---SFASSP--KRVSPAVML 238 (456)
Q Consensus 170 ------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~---~~~~~~--~~~~~~~~~ 238 (456)
+|+++.+.+............+++.|.|.|||||||.||||++||+|+++.+.. ...... .....|+++
T Consensus 227 ~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~l 306 (691)
T KOG1256|consen 227 NGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYL 306 (691)
T ss_pred CCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEE
Confidence 266666655432222224678899999999999999999999999999986543 222221 234479999
Q ss_pred EecchhhHhhHHHHHHHhHhcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCC----CC------------
Q 012774 239 FTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS----TD------------ 302 (456)
Q Consensus 239 ~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~----~~------------ 302 (456)
+++|+.|++........+..|+.+.+.++ |+..+.+.|++.+||.+.++|.+++++-+... ..
T Consensus 307 SyLPLAHi~er~~~~~~~~~G~~IgF~~g-D~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~ 385 (691)
T KOG1256|consen 307 SYLPLAHIFERVVELYTFYIGAKIGFARG-DILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAM 385 (691)
T ss_pred EeCcHHHHHHHHHHHhHhhcccEEEEecC-ChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 99999999999777777799999999985 88999999999999999999999987644211 00
Q ss_pred ----------CCC-----C--------------CCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCcccccccccccc
Q 012774 303 ----------GYD-----L--------------SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTV 353 (456)
Q Consensus 303 ----------~~~-----l--------------~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~ 353 (456)
+.. + .++|.+++|++|+++++...++..+ +++|.++||+|||++.++...
T Consensus 386 ~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~-g~~v~eGYGlTEts~g~~~~~ 464 (691)
T KOG1256|consen 386 AYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAAL-GCRVLEGYGLTETSAGTTLTL 464 (691)
T ss_pred HHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhc-CceeeecccccccCCceEecc
Confidence 000 0 4689999999999999999999998 899999999999985555432
Q ss_pred CCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCc
Q 012774 354 GPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGF 433 (456)
Q Consensus 354 ~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~ 433 (456)
. .+. ..+++|.|+|+++++++|+++...-..|..|||||+|+.+++|||++|+.|++.++.|||++|||+|+|+++|.
T Consensus 465 ~-~d~-~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG~~~p~G~ 542 (691)
T KOG1256|consen 465 P-GDN-VLGSVGPPVPGNEVKLVDVPEMNYDADGSKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIGEWDPNGT 542 (691)
T ss_pred C-CCC-CCCCcCCcccCceEEEechHHhCcCcCCCcceEEEecchhceeccCChHHHhhhhccccccccccceeECCCcc
Confidence 2 222 67999999999999999988777777788999999999999999999999999999999999999999999999
Q ss_pred EEEecccccceeeC-CeeecCCC
Q 012774 434 LFIVDRLKDLIKYK-GYQVLPLL 455 (456)
Q Consensus 434 l~~~GR~~d~ik~~-G~~v~p~e 455 (456)
|.|+||++++||.. |+.|.|..
T Consensus 543 l~IidRkK~ifklaqGEyVaPe~ 565 (691)
T KOG1256|consen 543 LKIIDRKKNIFKLAQGEYVAPEK 565 (691)
T ss_pred EEEEecccceEEcCCCCccChHH
Confidence 99999999999996 99999954
No 15
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.4e-62 Score=494.39 Aligned_cols=399 Identities=24% Similarity=0.305 Sum_probs=342.1
Q ss_pred CHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHh
Q 012774 39 SAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSL 118 (456)
Q Consensus 39 ~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~ 118 (456)
++.+++.+.++++ |+++|+++. ++++||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||+++
T Consensus 50 ~~~~~~~~~a~~~----pd~~Al~~~--~~~~Ty~el~~~~~~la~~L~~-~gi~~gd~V~i~~~n~~~~~~~~la~~~~ 122 (549)
T PRK07788 50 PFAGLVAHAARRA----PDRAALIDE--RGTLTYAELDEQSNALARGLLA-LGVRAGDGVAVLARNHRGFVLALYAAGKV 122 (549)
T ss_pred hHHHHHHHHHHHC----CCceEEEEC--CCceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHhc
Confidence 8899999999999 999999987 7899999999999999999998 89999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-----CCeEEEEcC----------CchhhhhcccCCCcc
Q 012774 119 GVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHRTILIDS----------PEFDSMTMSWNSKHE 183 (456)
Q Consensus 119 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-----~~~~~~~~~----------~~~~~~~~~~~~~~~ 183 (456)
|++++|+++.++.+++.++++.++++++|++++....+... ....+.... ..++++.....
T Consensus 123 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 198 (549)
T PRK07788 123 GARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDDEPSGSTDETLDDLIAGSS---- 198 (549)
T ss_pred CCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCccccCCcCcccHHHHhcCCC----
Confidence 99999999999999999999999999999998876665432 112221111 12223222111
Q ss_pred ccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEE
Q 012774 184 LDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAV 263 (456)
Q Consensus 184 ~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~ 263 (456)
........++.++++|||||||.||+|.++|+++...+......+ ....+++++...|++|.+++...+.++..|++++
T Consensus 199 ~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v 277 (549)
T PRK07788 199 TAPLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRV-PFRAGETTLLPAPMFHATGWAHLTLAMALGSTVV 277 (549)
T ss_pred CCCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhC-CCCcCCeEEEccchHHHHHHHHHHHHHHhCCEEE
Confidence 111223456789999999999999999999999998877776666 5778899999999999999977888999999999
Q ss_pred EecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCC--CCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccC
Q 012774 264 VMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYG 341 (456)
Q Consensus 264 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG 341 (456)
+...+++..+++.++++++|++.++|+++..+++.... ...+++++|.+++||+++++++.+++++.+ +..+++.||
T Consensus 278 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~l~~~YG 356 (549)
T PRK07788 278 LRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAF-GPVLYNLYG 356 (549)
T ss_pred ECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHh-CccceeccC
Confidence 99889999999999999999999999999999987654 455688999999999999999999999988 778999999
Q ss_pred ccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeee
Q 012774 342 LTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMR 421 (456)
Q Consensus 342 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~ 421 (456)
+||++....... .+.....+++|+|+++++++|+| +++++++.|+.|||+++|+.++.||++++.. . . .+|||+
T Consensus 357 ~TE~~~~~~~~~-~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~--~-~-~~g~~~ 430 (549)
T PRK07788 357 STEVAFATIATP-EDLAEAPGTVGRPPKGVTVKILD-ENGNEVPRGVVGRIFVGNGFPFEGYTDGRDK--Q-I-IDGLLS 430 (549)
T ss_pred cchhchhhccCh-hhhhhcCCCcccCCCCcEEEEEC-CCcCCCCCCCeEEEEEeCCCccccccCCCcc--c-c-cCCcee
Confidence 999986544322 12223457899999999999999 7789999999999999999999999998765 2 2 479999
Q ss_pred ccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 422 TGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 422 TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
|||+|++|+||+++|.||.||+||++|++|+|.|+
T Consensus 431 TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~eI 465 (549)
T PRK07788 431 SGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAEV 465 (549)
T ss_pred cCceEEEcCCCCEEEeccCcceEEECCEEECHHHH
Confidence 99999999999999999999999999999999874
No 16
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.4e-62 Score=498.77 Aligned_cols=413 Identities=21% Similarity=0.267 Sum_probs=329.9
Q ss_pred CCCCCHHHHhhhccc-C--CCCCCCCCcEEEECCC----CceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCc
Q 012774 35 DAPISAVDYVSSLRA-T--LPWRDDDTVALINSVT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE 107 (456)
Q Consensus 35 ~~~~~~~~~l~~~~~-~--~~~~~p~~~A~~~~~~----~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~ 107 (456)
.+.+|....+.++.. . + |+++|+++..+ .+++||+||.++++++|+.|++ +|+++||+|+++++|+++
T Consensus 55 ~~~~n~~~~~l~~~~~~~~~----~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~GDrV~i~~~n~~e 129 (647)
T PTZ00237 55 GGELNTCYNVLDIHVKNPLK----RDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLN-LNISKNDNVLIYMANTLE 129 (647)
T ss_pred CCeeeHHHHHHHHhhcccCC----CCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHH
Confidence 666787776665543 2 5 89999987421 3689999999999999999998 899999999999999999
Q ss_pred HHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccc---------hHHHHh---cc---C-CeEEEEcC---
Q 012774 108 IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSS---------VVHKLA---KL---K-HRTILIDS--- 168 (456)
Q Consensus 108 ~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~---------~~~~~~---~~---~-~~~~~~~~--- 168 (456)
+++++|||+++|++++|+++.++.+++.+++++++++++|+++. ....+. .. . ..++.+..
T Consensus 130 ~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~ 209 (647)
T PTZ00237 130 PLIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDI 209 (647)
T ss_pred HHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCc
Confidence 99999999999999999999999999999999999999999752 111111 10 1 12332210
Q ss_pred ------------------CchhhhhcccC---CCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHH-HHHHHHHhcc
Q 012774 169 ------------------PEFDSMTMSWN---SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRN-LTAAVASSFA 226 (456)
Q Consensus 169 ------------------~~~~~~~~~~~---~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~-l~~~~~~~~~ 226 (456)
..|+++..... ...........++++++++|||||||.||+|+++|.+ +.........
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~ 289 (647)
T PTZ00237 210 TSESDLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRS 289 (647)
T ss_pred ccccccccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHH
Confidence 01222211100 0000112335678999999999999999999999998 4433322222
Q ss_pred CCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEecC--CC----HHHHHHHHHHhcceeEEecHHHHHHHhcCCC
Q 012774 227 SSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR--FD----LKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS 300 (456)
Q Consensus 227 ~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~--~~----~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 300 (456)
.. ....++++++..|+.|+.+...++.++..|+++++.+. +. +..+++.|+++++|+++++|++++.|++...
T Consensus 290 ~~-~~~~~d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~ 368 (647)
T PTZ00237 290 II-EKDIPTVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDP 368 (647)
T ss_pred hc-CCCCCcEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCc
Confidence 33 45678999999999998766678899999999998764 12 6889999999999999999999999987532
Q ss_pred -----CCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccCCCCCCCCCccccccCCcEEEE
Q 012774 301 -----TDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKI 375 (456)
Q Consensus 301 -----~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i 375 (456)
....+++++|.+++||+++++++.+++++.+ ++++++.||+||++++...... ......+++|+|+|+++++|
T Consensus 369 ~~~~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~-g~~i~~~yG~TE~~~~~~~~~~-~~~~~~~s~G~p~~g~~~~i 446 (647)
T PTZ00237 369 EATIIRSKYDLSNLKEIWCGGEVIEESIPEYIENKL-KIKSSRGYGQTEIGITYLYCYG-HINIPYNATGVPSIFIKPSI 446 (647)
T ss_pred cccccccccCcchheEEEecCccCCHHHHHHHHHhc-CCCEEeeechHHhChhhhccCC-CCCCCCCCCccCcCCceEEE
Confidence 2345689999999999999999999999988 7999999999999866543222 22233478999999999999
Q ss_pred EcCCCCCCCCCCCcceEEEecC---CcccccCCCccccccccCC-CCeeeccceEEEccCCcEEEecccccceeeCCeee
Q 012774 376 VDPETGDSLPPGKEGELSIRGP---TIMKGYVGEPEVTSATLLP-DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQV 451 (456)
Q Consensus 376 ~d~~~~~~~~~g~~Gel~i~g~---~~~~gy~~~~~~~~~~~~~-~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v 451 (456)
+| ++|++++.|+.|||++++| +++.|||++++.+.+.|.. +|||+|||+|++|+||+++|+||.||+||++|+||
T Consensus 447 ~d-~~g~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI 525 (647)
T PTZ00237 447 LS-EDGKELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKISGNKV 525 (647)
T ss_pred EC-CCCCCCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEECCEEe
Confidence 99 6899999999999999986 7899999999998877754 78999999999999999999999999999999999
Q ss_pred cCCCC
Q 012774 452 LPLLN 456 (456)
Q Consensus 452 ~p~e~ 456 (456)
+|.||
T Consensus 526 ~p~eI 530 (647)
T PTZ00237 526 QLNTI 530 (647)
T ss_pred CHHHH
Confidence 99875
No 17
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=9.9e-62 Score=499.42 Aligned_cols=413 Identities=18% Similarity=0.243 Sum_probs=333.2
Q ss_pred CCCCCHHHHhhh-ccc-CCCCCCCCCcEEEECC----CCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcH
Q 012774 35 DAPISAVDYVSS-LRA-TLPWRDDDTVALINSV----TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEI 108 (456)
Q Consensus 35 ~~~~~~~~~l~~-~~~-~~~~~~p~~~A~~~~~----~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~ 108 (456)
++.+|+...+.+ .+. .+ |+++|+++.. ..+++||+||.++++++|+.|++ +|+++||+|+++++|++++
T Consensus 84 g~~~N~~~~~l~~~~~~~~----~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~GdrV~i~~pn~~e~ 158 (666)
T PLN02654 84 GGKTNICYNCLDRNVEAGN----GDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKD-VGVKKGDAVVIYLPMLMEL 158 (666)
T ss_pred CCEeeHHHHHHHHhhccCC----CCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHH
Confidence 566888665554 443 36 9999998732 23689999999999999999998 9999999999999999999
Q ss_pred HHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHH---------H----hc-----cCCe-EEEEcCC
Q 012774 109 PILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHK---------L----AK-----LKHR-TILIDSP 169 (456)
Q Consensus 109 ~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~---------~----~~-----~~~~-~~~~~~~ 169 (456)
++++|||+++|++++|+++.++.+++..++++++++++|+++..... + .. .... ++..+..
T Consensus 159 v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (666)
T PLN02654 159 PIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQ 238 (666)
T ss_pred HHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEeccc
Confidence 99999999999999999999999999999999999999998754211 1 10 0111 1111110
Q ss_pred ----------------chhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHH-HhccCCCCCC
Q 012774 170 ----------------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVA-SSFASSPKRV 232 (456)
Q Consensus 170 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~-~~~~~~~~~~ 232 (456)
.|+++.... ...........+++++++|||||||.||||+++|++++.... .....+ ...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~-~~~ 315 (666)
T PLN02654 239 LAMKREDTKWQEGRDVWWQDVVPNY--PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAF-DYK 315 (666)
T ss_pred ccccccccccccCCcccHHHHhhcC--CCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhc-CCC
Confidence 011111100 000111224678999999999999999999999999865433 333344 678
Q ss_pred CCcEEEEecchhhHhhH-HHHHHHhHhcceEEEecC----CCHHHHHHHHHHhcceeEEecHHHHHHHhcCCC--CCCCC
Q 012774 233 SPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYD 305 (456)
Q Consensus 233 ~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~ 305 (456)
++|++++..|+.|+.+. ..++.++..|+++++.+. +++..+++.|+++++|+++++|++++.|++... ....+
T Consensus 316 ~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~ 395 (666)
T PLN02654 316 PTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHS 395 (666)
T ss_pred CCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCC
Confidence 89999999999999987 557789999999999863 589999999999999999999999999988653 23456
Q ss_pred CCCceEEEecCCCCCHHHHHHHHHhCCC--CceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCC
Q 012774 306 LSSLETVACGAAPLGKDTIMAFASKFPK--VVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDS 383 (456)
Q Consensus 306 l~~lr~v~~gG~~~~~~~~~~~~~~~~~--~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~ 383 (456)
++++|.++++|+++++++++++.+.++. +++.+.||+||+++............+.+++|+|++|++++|+| ++|+.
T Consensus 396 l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d-~~g~~ 474 (666)
T PLN02654 396 RKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGKE 474 (666)
T ss_pred hhheeEEEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCCCCCCCCCccCCCCCCceEEEEC-CCCCC
Confidence 8899999999999999999999998842 78999999999987655422211234668999999999999999 77888
Q ss_pred CCCCCcceEEEec--CCcccccCCCccccccccCC--CCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 384 LPPGKEGELSIRG--PTIMKGYVGEPEVTSATLLP--DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 384 ~~~g~~Gel~i~g--~~~~~gy~~~~~~~~~~~~~--~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
++.++.|||++++ |+++.|||++++.+...+.. +|||+|||+|++|+||+++|+||.||+||++|+||+|.||
T Consensus 475 ~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~EI 551 (666)
T PLN02654 475 IEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEV 551 (666)
T ss_pred CCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHHHH
Confidence 9888899999999 78999999999888766532 7899999999999999999999999999999999999875
No 18
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=1e-60 Score=483.99 Aligned_cols=428 Identities=36% Similarity=0.591 Sum_probs=356.0
Q ss_pred eeeCCCCCCCCCCCCCCCCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEE
Q 012774 21 TFHSLRPPIDLPPEDAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFV 100 (456)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l 100 (456)
.|++..+..+.+ ...|+.+.+.+.++.+ |+++|+++...++.+||+||.++++++|..|.+ .|+++||+|++
T Consensus 14 ~~~~~~~~~~~~---~~~~~~~~l~~~a~~~----p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~-~g~~~g~~V~i 85 (546)
T PLN02330 14 IFRSRYPSVPVP---DKLTLPDFVLQDAELY----ADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRS-LGLRKGQVVVV 85 (546)
T ss_pred eeccCCCCCCCC---CCCcHHHHHhhhhhcC----CCccEEEecCCCCcccHHHHHHHHHHHHHHHHH-hCCCCCCEEEE
Confidence 344444443322 2478999999999999 999999986557899999999999999999999 89999999999
Q ss_pred EcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhccCCeEEEEcC------Cchhhh
Q 012774 101 LSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDS------PEFDSM 174 (456)
Q Consensus 101 ~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 174 (456)
+++|+++++++++||+++|++++|+++..+.+++.++++.++++++++++.....+......++.++. ..+.++
T Consensus 86 ~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 165 (546)
T PLN02330 86 VLPNVAEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGLGLPVIVLGEEKIEGAVNWKEL 165 (546)
T ss_pred ECCCchHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhcCCcEEEecCCCCCCcccHHHH
Confidence 99999999999999999999999999999999999999999999999999888777665555555542 224444
Q ss_pred hcccCCC-ccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCC-CCCCCCcEEEEecchhhHhhH-HH
Q 012774 175 TMSWNSK-HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS-PKRVSPAVMLFTMPYFHIYGL-FF 251 (456)
Q Consensus 175 ~~~~~~~-~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~g~-~~ 251 (456)
....... ..........+++++++|||||||.||+|.++|+++..++....... ......++.+.++|++|.+++ ..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~ 245 (546)
T PLN02330 166 LEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGITGI 245 (546)
T ss_pred HhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHHHH
Confidence 3322111 01112234568899999999999999999999999987665432222 122345688999999999988 45
Q ss_pred HHHHhHhcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCC--CceEEEecCCCCCHHHHHHHHH
Q 012774 252 CFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLS--SLETVACGAAPLGKDTIMAFAS 329 (456)
Q Consensus 252 ~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~--~lr~v~~gG~~~~~~~~~~~~~ 329 (456)
++.++..|+++++.+.+++..+++.++++++|++.++|+++..+++.......++. ++|.+++||+++++++++++++
T Consensus 246 ~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~~~~~~~ 325 (546)
T PLN02330 246 CCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPELLTAFEA 325 (546)
T ss_pred HHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999886544444444 4799999999999999999999
Q ss_pred hCCCCceEeccCccccccccccccCCCC---CCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCC
Q 012774 330 KFPKVVLVQAYGLTESTAGVFRTVGPDE---CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGE 406 (456)
Q Consensus 330 ~~~~~~i~~~yG~tE~~~~~~~~~~~~~---~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~ 406 (456)
.|++.++++.||+||++.+......... ....+++|.|+++++++|+|++++++++.|+.|||+++|+.++.||+++
T Consensus 326 ~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g~~Gel~v~g~~~~~gy~~~ 405 (546)
T PLN02330 326 KFPGVQVQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKNTPGELCVRSQCVMQGYYNN 405 (546)
T ss_pred HcCCCeEEecccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCCCceEEEEecchhhhhhccC
Confidence 9989999999999999765543211111 1234689999999999999988899999999999999999999999999
Q ss_pred ccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 407 PEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 407 ~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
++.+.+.++.+|||+|||+|++++||++++.||.+|+||++|++|+|.|+
T Consensus 406 ~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~i 455 (546)
T PLN02330 406 KEETDRTIDEDGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAEL 455 (546)
T ss_pred ccchhhhccCCCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHH
Confidence 99999888889999999999999999999999999999999999999764
No 19
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=8.8e-62 Score=501.31 Aligned_cols=410 Identities=25% Similarity=0.291 Sum_probs=326.5
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEEC----------CCC-----------ceecHHHHHHHHHHHHHHhHhhcCCCCCC
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINS----------VTG-----------LRVSFSEFTRRTNSLASYLQNVTRLSKND 96 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~----------~~~-----------~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd 96 (456)
.|+.+++.+.++.+ ||++|+... ..+ +.+||+||.++++++|++|.+ +|+++||
T Consensus 58 ~t~~~l~~~~~~~~----pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-lG~~~gd 132 (696)
T PLN02387 58 TTLAALFEQSCKKY----SDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVA-LGHNKEE 132 (696)
T ss_pred CCHHHHHHHHHHHC----CCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHH-hCCCCCC
Confidence 58999999999999 999999421 012 348999999999999999998 8999999
Q ss_pred EEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-----CC-eEEEEcCCc
Q 012774 97 TAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KH-RTILIDSPE 170 (456)
Q Consensus 97 ~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-----~~-~~~~~~~~~ 170 (456)
+|+|+++|+++|+++++||+++|++++|+++.++.+++.+++++++++++|++++....+... .. .++.++...
T Consensus 133 ~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~l~~ii~~~~~~ 212 (696)
T PLN02387 133 RVAIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLETVKRVIYMDDEG 212 (696)
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccCCceEEEEECCCC
Confidence 999999999999999999999999999999999999999999999999999998776655422 12 244444211
Q ss_pred -----------------hhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCC
Q 012774 171 -----------------FDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVS 233 (456)
Q Consensus 171 -----------------~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~ 233 (456)
+.++....... ........++++++++|||||||.||||++||+++..++...........+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~ 291 (696)
T PLN02387 213 VDSDSSLSGSSNWTVSSFSEVEKLGKEN-PVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPKLGK 291 (696)
T ss_pred chhhhhhhccCCcEEEEHHHHHHhhccC-CCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcCCCCC
Confidence 22221111110 111223467999999999999999999999999999888776554435678
Q ss_pred CcEEEEecchhhHhhHHHHHHHhHhcceEEEecCCC--------HHHHHHHHHHhcceeEEecHHHHHHHhcCCCCC---
Q 012774 234 PAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFD--------LKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTD--- 302 (456)
Q Consensus 234 ~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~--------~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~--- 302 (456)
+|++++.+|++|++++...+..+..|+++.+..... +..++..++++++|++.++|.++..+.+.....
T Consensus 292 ~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~ 371 (696)
T PLN02387 292 NDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVDA 371 (696)
T ss_pred CCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHhc
Confidence 899999999999999876666677787776643211 234567899999999999999999886431100
Q ss_pred ----------------------------C--C-------------CC-CCceEEEecCCCCCHHHHHHHHHhCCCCceEe
Q 012774 303 ----------------------------G--Y-------------DL-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (456)
Q Consensus 303 ----------------------------~--~-------------~l-~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~ 338 (456)
. . .+ +++|.+++||+++++++.+.++..+ ++++++
T Consensus 372 ~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~-g~~v~~ 450 (696)
T PLN02387 372 KGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICL-GAPIGQ 450 (696)
T ss_pred ccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHc-CCCeeE
Confidence 0 0 01 5899999999999999988888777 899999
Q ss_pred ccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCC-CCC--CCCCcceEEEecCCcccccCCCccccccccC
Q 012774 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETG-DSL--PPGKEGELSIRGPTIMKGYVGEPEVTSATLL 415 (456)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~-~~~--~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~ 415 (456)
.||+||+++.++.... .....+++|+|+|+++++|+|.+++ ..+ .++..|||+|+|++++.|||++|+.|.+.|.
T Consensus 451 ~YG~TEt~~~~~~~~~--~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY~~~pe~T~~~f~ 528 (696)
T PLN02387 451 GYGLTETCAGATFSEW--DDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYFKNQEKTDEVYK 528 (696)
T ss_pred eechhhcccceeecCc--ccCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccCcccchhcCCHHHHhhhhc
Confidence 9999999876654322 2335689999999999999984443 322 3445799999999999999999999999983
Q ss_pred --CCC--eeeccceEEEccCCcEEEecccccceee-CCeeecCCCC
Q 012774 416 --PDG--WMRTGDLCYIDEDGFLFIVDRLKDLIKY-KGYQVLPLLN 456 (456)
Q Consensus 416 --~~g--~~~TGDl~~~~~dg~l~~~GR~~d~ik~-~G~~v~p~e~ 456 (456)
.+| ||+|||+|++|+||+|+|.||+||+||+ +|++|+|.||
T Consensus 529 ~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eI 574 (696)
T PLN02387 529 VDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKV 574 (696)
T ss_pred cccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHH
Confidence 345 9999999999999999999999999998 5999999874
No 20
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.2e-61 Score=501.56 Aligned_cols=407 Identities=22% Similarity=0.261 Sum_probs=326.1
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECC-------------------------CCceecHHHHHHHHHHHHHHhHhhcCC
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSV-------------------------TGLRVSFSEFTRRTNSLASYLQNVTRL 92 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~-------------------------~~~~~Ty~eL~~~~~~~a~~L~~~~gi 92 (456)
.|++++|.+.++.+ |+++|+.+.. ..+++||+||.++++++|+.|.+ +|+
T Consensus 69 ~t~~~~~~~~~~~~----p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~-~Gv 143 (700)
T PTZ00216 69 PNFLQRLERICKER----GDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAE-LGL 143 (700)
T ss_pred CCHHHHHHHHHHhC----CCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHH-hCC
Confidence 58999999999999 9999998621 25789999999999999999998 899
Q ss_pred CCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhc------c-CCeEEE
Q 012774 93 SKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK------L-KHRTIL 165 (456)
Q Consensus 93 ~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~------~-~~~~~~ 165 (456)
++||+|+|+++|+++|+++++||+++|++++|+++.++++++.+++++++++++|++......+.. . ...++.
T Consensus 144 ~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~~~~ii~ 223 (700)
T PTZ00216 144 TKGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGMPNTTIIY 223 (700)
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccCCceEEEE
Confidence 999999999999999999999999999999999999999999999999999999998765544321 1 123444
Q ss_pred EcCC------------chhhhhcccC--CCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCC---
Q 012774 166 IDSP------------EFDSMTMSWN--SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--- 228 (456)
Q Consensus 166 ~~~~------------~~~~~~~~~~--~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~--- 228 (456)
++.. .++++..... ...........++++++++|||||||.||||++||+++.+.+......+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~ 303 (700)
T PTZ00216 224 LDSLPASVDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLNDL 303 (700)
T ss_pred ECCCccccccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcccc
Confidence 4321 2333322221 0101112234678999999999999999999999999998876654332
Q ss_pred -CCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEecCCCHHHHHH-------HHHHhcceeEEecHHHHHHHhcCCC
Q 012774 229 -PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLK-------AVEEFRVTHAAVTPPIVVAMSKGGS 300 (456)
Q Consensus 229 -~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~-------~i~~~~~t~~~~~P~~~~~l~~~~~ 300 (456)
....+++++++++|++|+++.......+..|+++.+. ++..+.+ .++++++|++.++|.+++.+.+...
T Consensus 304 ~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~ 380 (700)
T PTZ00216 304 IGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVE 380 (700)
T ss_pred cCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHH
Confidence 1236789999999999999886555567778776663 4555554 6889999999999999988764210
Q ss_pred C-------------------------CCC----------------CCCCceEEEecCCCCCHHHHHHHHHhCCCCceEec
Q 012774 301 T-------------------------DGY----------------DLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQA 339 (456)
Q Consensus 301 ~-------------------------~~~----------------~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~ 339 (456)
. ... .-+++|.+++||+++++++.+.++..+ + ++++.
T Consensus 381 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~-~-~l~~~ 458 (700)
T PTZ00216 381 AKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVF-G-MVIQG 458 (700)
T ss_pred HHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHh-h-hHhhc
Confidence 0 000 015799999999999999998887776 5 99999
Q ss_pred cCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCC-CCCCCCCcceEEEecCCcccccCCCccccccccCCCC
Q 012774 340 YGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETG-DSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDG 418 (456)
Q Consensus 340 yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~-~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g 418 (456)
||+||+++.++... ......+++|+|+++++++|+|.++. ...+++..|||+|+|++++.|||++|+.|++.|+.+|
T Consensus 459 YG~TEt~~~~~~~~--~~~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~dG 536 (700)
T PTZ00216 459 WGLTETVCCGGIQR--TGDLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRGPFLFKGYYKQEELTREVLDEDG 536 (700)
T ss_pred cCcccccccccccC--CCCCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcCCcccchhcCChhHhhhhccccC
Confidence 99999987655422 22335689999999999999995432 2345567899999999999999999999999998899
Q ss_pred eeeccceEEEccCCcEEEeccccccee-eCCeeecCCCC
Q 012774 419 WMRTGDLCYIDEDGFLFIVDRLKDLIK-YKGYQVLPLLN 456 (456)
Q Consensus 419 ~~~TGDl~~~~~dg~l~~~GR~~d~ik-~~G~~v~p~e~ 456 (456)
||+|||+|++|+||+|+|+||+||+|| .+|++|+|.||
T Consensus 537 w~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eI 575 (700)
T PTZ00216 537 WFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEAL 575 (700)
T ss_pred CeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHH
Confidence 999999999999999999999999999 79999999874
No 21
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=7.4e-61 Score=491.55 Aligned_cols=414 Identities=19% Similarity=0.229 Sum_probs=333.0
Q ss_pred CCCCCHHH-HhhhcccCCCCCCCCCcEEEECC----CCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHH
Q 012774 35 DAPISAVD-YVSSLRATLPWRDDDTVALINSV----TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP 109 (456)
Q Consensus 35 ~~~~~~~~-~l~~~~~~~~~~~p~~~A~~~~~----~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~ 109 (456)
.+.+|+.. ++.+.+..+ |+++|+++.. ..+++||+||.++++++|+.|++ +|+++||+|+++++|+++++
T Consensus 48 ~~~~n~~~~~l~~~~~~~----p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~Gd~V~i~~~n~~e~v 122 (628)
T TIGR02316 48 GGRTNLCHNALDRHLDER----GEQLALVTVSSETGQERTLTYRQLHREVNVFASALRA-LGVGRGDRVLIYMPMIAEAV 122 (628)
T ss_pred CCEeeHHHHHHHHHhCcC----CCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHH
Confidence 45577754 555566667 9999998731 24689999999999999999998 89999999999999999999
Q ss_pred HHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchH---------HHH----hc---cCCeEEEEcCC----
Q 012774 110 ILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV---------HKL----AK---LKHRTILIDSP---- 169 (456)
Q Consensus 110 ~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~----~~---~~~~~~~~~~~---- 169 (456)
++++||+++|++++|+++.++.+++.+++++++++++|+++... ..+ .. ....+++++..
T Consensus 123 ~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~ 202 (628)
T TIGR02316 123 FAMLACARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPM 202 (628)
T ss_pred HHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc
Confidence 99999999999999999999999999999999999999976421 111 11 12234444321
Q ss_pred --------chhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHH-HhccCCCCCCCCcEEEEe
Q 012774 170 --------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVA-SSFASSPKRVSPAVMLFT 240 (456)
Q Consensus 170 --------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~-~~~~~~~~~~~~~~~~~~ 240 (456)
.+.++..... ..........++++++++|||||||.||||+++|.++..... .....+ ...++|++++.
T Consensus 203 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-~~~~~d~~~~~ 280 (628)
T TIGR02316 203 RLIPGRDVDYAALRTQHE-DAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIF-GIRAGQVMFSA 280 (628)
T ss_pred CcccCccccHHHHhhccc-cCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhc-CCCCCcEEEEc
Confidence 1222211110 001111224568999999999999999999999999864433 333334 67788999999
Q ss_pred cchhhHhhH-HHHHHHhHhcceEEEecC----CCHHHHHHHHHHhcceeEEecHHHHHHHhcCCC--CCCCCCCCceEEE
Q 012774 241 MPYFHIYGL-FFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVA 313 (456)
Q Consensus 241 ~p~~~~~g~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~v~ 313 (456)
.|+.|+.++ ..++.++..|+++++.+. +++..+++.|+++++|+++++|++++.|.+... ....+++++|.++
T Consensus 281 ~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~ 360 (628)
T TIGR02316 281 SDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLF 360 (628)
T ss_pred CCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEE
Confidence 999999886 667889999999999863 578999999999999999999999999987643 2345689999999
Q ss_pred ecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccC--CCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcce
Q 012774 314 CGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG--PDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGE 391 (456)
Q Consensus 314 ~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~--~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Ge 391 (456)
+||+++++++.+++++.+ +..+++.||+||++..++.... .......+++|+|++|++++|+|++++++++.|+.||
T Consensus 361 ~gGe~l~~~~~~~~~~~~-~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~~Ge 439 (628)
T TIGR02316 361 LAGEPLDEPTAHWITDGL-GKPVIDNYWQTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNEKGV 439 (628)
T ss_pred EecCCCCHHHHHHHHHHh-CCCEEecccccccCceeecCCCCCCcCCCCCCCcccCcCCceEEEEECCCCCCCCCCCcEE
Confidence 999999999999999888 7899999999999854433221 1112345789999999999999966899999999999
Q ss_pred EEEecC---CcccccCCCcccccccc---CCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 392 LSIRGP---TIMKGYVGEPEVTSATL---LPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 392 l~i~g~---~~~~gy~~~~~~~~~~~---~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
|+++|| +++.||+++++.+.+.+ ..++||+|||+|++|+||+++|+||.||+||++|+||+|.||
T Consensus 440 l~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eI 510 (628)
T TIGR02316 440 LTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREI 510 (628)
T ss_pred EEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHH
Confidence 999998 56789999987766543 246799999999999999999999999999999999999875
No 22
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.1e-60 Score=489.85 Aligned_cols=408 Identities=26% Similarity=0.346 Sum_probs=334.0
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEEC------CCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINS------VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPIL 111 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~------~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~ 111 (456)
.|++++|.+.++++ |+++|+++. ...+++||+||.+++.++|+.|++ +|+++||+|+++++|+++++++
T Consensus 25 ~t~~~~l~~~a~~~----p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~-~Gi~~gd~V~i~~~n~~e~~~~ 99 (632)
T PRK07529 25 ASTYELLSRAAARH----PDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHS-LGVGPGDVVAFLLPNLPETHFA 99 (632)
T ss_pred CCHHHHHHHHHHHC----CCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHH
Confidence 59999999999999 999999863 135799999999999999999998 9999999999999999999999
Q ss_pred HHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccch-----HHHHh----cc-CC-eEEEEcCC-----------
Q 012774 112 YFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSV-----VHKLA----KL-KH-RTILIDSP----------- 169 (456)
Q Consensus 112 ~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~----~~-~~-~~~~~~~~----------- 169 (456)
+|||+++| +++|+++.++++++.++++.++++++|++... ..++. .. .. .++.++..
T Consensus 100 ~lA~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 178 (632)
T PRK07529 100 LWGGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLARYLPGPKRLAV 178 (632)
T ss_pred HHHHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCcccccccccccc
Confidence 99999999 56999999999999999999999999997543 12221 11 11 22333321
Q ss_pred ------------chhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEE
Q 012774 170 ------------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVM 237 (456)
Q Consensus 170 ------------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~ 237 (456)
++.+.................++++++++|||||||.||+|.++|+++..+.......+ ...+++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-~~~~~d~~ 257 (632)
T PRK07529 179 PLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLL-GLGPGDTV 257 (632)
T ss_pred cccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhc-CCCCCCEE
Confidence 12222221111101111234668999999999999999999999999988877666655 56889999
Q ss_pred EEecchhhHhhH-HHHHHHhHhcceEEEecC--C-C---HHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCce
Q 012774 238 LFTMPYFHIYGL-FFCFRAAALMETAVVMQR--F-D---LKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLE 310 (456)
Q Consensus 238 ~~~~p~~~~~g~-~~~~~~l~~G~~~~~~~~--~-~---~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr 310 (456)
++.+|++|.+++ ..++.++..|+++++.+. + + ...+++.++++++|++.++|+++..|++... ...+++++|
T Consensus 258 l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~-~~~~~~slr 336 (632)
T PRK07529 258 FCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPV-DGHDISSLR 336 (632)
T ss_pred EEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcc-cCCCccceE
Confidence 999999999988 567889999999998753 1 1 3688999999999999999999999988653 234688999
Q ss_pred EEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcC-CCC---CCCCC
Q 012774 311 TVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDP-ETG---DSLPP 386 (456)
Q Consensus 311 ~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~-~~~---~~~~~ 386 (456)
.+++||+++++++.+++++.+ ++++++.||+||++.++.... .......+++|+|+|+++++|+.. +++ +++++
T Consensus 337 ~v~~gg~~l~~~l~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~-~~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~ 414 (632)
T PRK07529 337 YALCGAAPLPVEVFRRFEAAT-GVRIVEGYGLTEATCVSSVNP-PDGERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAV 414 (632)
T ss_pred EEEEcCCCCCHHHHHHHHHHh-CCcEeeeecccccCcccccCC-ccccccCCCcccccCCceEEEEEcCCCCcccccCCC
Confidence 999999999999999999988 899999999999987665432 222335689999999999998632 445 78999
Q ss_pred CCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 387 GKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 387 g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
|+.|||+|+|++++.||++++. +...+..+|||+|||+|++|+||++++.||.||+||++|++|+|.||
T Consensus 415 g~~Gel~v~gp~v~~GY~~~~~-~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p~eI 483 (632)
T PRK07529 415 DEVGVLCIAGPNVFSGYLEAAH-NKGLWLEDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNIDPAAI 483 (632)
T ss_pred CCceEEEEECCCccccccCCcc-ccccccCCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEECHHHH
Confidence 9999999999999999998654 55566578999999999999999999999999999999999999874
No 23
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=1.9e-60 Score=489.24 Aligned_cols=414 Identities=20% Similarity=0.246 Sum_probs=335.8
Q ss_pred CCCCCHHHHhh-hcccCCCCCCCCCcEEEECCC----CceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHH
Q 012774 35 DAPISAVDYVS-SLRATLPWRDDDTVALINSVT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP 109 (456)
Q Consensus 35 ~~~~~~~~~l~-~~~~~~~~~~p~~~A~~~~~~----~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~ 109 (456)
++.+|+...+. +.++.+ |+++|+++..+ .+++||+||.+++.++|+.|++ +|+++||+|+++++|+++++
T Consensus 53 ~~~~n~~~~~l~~~~~~~----p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~~ 127 (625)
T TIGR02188 53 GGELNVSYNCVDRHLEAR----PDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKS-LGVKKGDRVAIYMPMIPEAA 127 (625)
T ss_pred CCEEEHHHHHHHHhhccC----CCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHH
Confidence 45567766554 456666 99999987422 3589999999999999999998 99999999999999999999
Q ss_pred HHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchH---------HH----HhccC--C-eEEEEcCC----
Q 012774 110 ILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV---------HK----LAKLK--H-RTILIDSP---- 169 (456)
Q Consensus 110 ~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~----~~~~~--~-~~~~~~~~---- 169 (456)
++++||+++|++++|+++.++.+++.+++++++++++|+++... .. +.... . .+++++..
T Consensus 128 ~~~lA~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (625)
T TIGR02188 128 IAMLACARIGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGNPV 207 (625)
T ss_pred HHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCCCc
Confidence 99999999999999999999999999999999999999986532 11 11111 1 23333211
Q ss_pred --------chhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEec
Q 012774 170 --------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTM 241 (456)
Q Consensus 170 --------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~ 241 (456)
.++++..... .........++++++++|||||||.||+|+++|+++..+.............+|++++..
T Consensus 208 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 285 (625)
T TIGR02188 208 PWVEGRDVWWHDLMAKAS--AYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTA 285 (625)
T ss_pred CccccccccHHHHHhhcC--CCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECC
Confidence 1222221111 011222356789999999999999999999999998765544333322577889999999
Q ss_pred chhhHhhH-HHHHHHhHhcceEEEecC----CCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCC--CCCCCCCceEEEe
Q 012774 242 PYFHIYGL-FFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVAC 314 (456)
Q Consensus 242 p~~~~~g~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~v~~ 314 (456)
|++|+.+. ..++.++..|+++++.+. +++..+++.|+++++|+++++|++++.|.+.... ...+++++|.+++
T Consensus 286 ~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~ 365 (625)
T TIGR02188 286 DVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGS 365 (625)
T ss_pred CchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEE
Confidence 99999887 567889999999998753 4899999999999999999999999999876432 3356889999999
Q ss_pred cCCCCCHHHHHHHHHhCC--CCceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCC-CCCcce
Q 012774 315 GAAPLGKDTIMAFASKFP--KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLP-PGKEGE 391 (456)
Q Consensus 315 gG~~~~~~~~~~~~~~~~--~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~-~g~~Ge 391 (456)
||+++++++++++.+.++ ++++++.||+||+++.++.........+.+++|+|++|++++|+| ++|+.++ +|+.||
T Consensus 366 ~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d-~~g~~~~~~g~~Ge 444 (625)
T TIGR02188 366 VGEPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPGATPTKPGSATLPFFGIEPAVVD-EEGNPVEGPGEGGY 444 (625)
T ss_pred ecCCCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCCCCCCcCCCcccCCcCCceEEEEC-CCCCCCCCCCCeEE
Confidence 999999999999999884 378999999999987755432222234568899999999999999 7889999 899999
Q ss_pred EEEec--CCcccccCCCccccccccC--CCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 392 LSIRG--PTIMKGYVGEPEVTSATLL--PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 392 l~i~g--~~~~~gy~~~~~~~~~~~~--~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
|+++| |+++.||+++++.+.+.+. .+|||+|||+|++|+||++++.||.||+||++|++|+|.||
T Consensus 445 L~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eI 513 (625)
T TIGR02188 445 LVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEI 513 (625)
T ss_pred EEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHH
Confidence 99999 6899999999987776654 37899999999999999999999999999999999999875
No 24
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.2e-60 Score=482.13 Aligned_cols=405 Identities=30% Similarity=0.482 Sum_probs=348.0
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhc-CCCCCCEEEEEcCCCCcHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVT-RLSKNDTAFVLSTNSIEIPILYFSLL 116 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~-gi~~gd~V~l~~~~~~~~~~~~la~~ 116 (456)
.++.++|.+.+.++ |+++|+++. ++++||+||.+++.++|..|.+ . |+++||+|+++++|+++++++++||+
T Consensus 10 ~tl~~~l~~~a~~~----~~~~a~~~~--~~~~Ty~~l~~~v~~~a~~L~~-~~g~~~g~~V~i~~~~~~~~~~~~lA~~ 82 (546)
T PRK08314 10 TSLFHNLEVSARRY----PDKTAIVFY--GRAISYRELLEEAERLAGYLQQ-ECGVRKGDRVLLYMQNSPQFVIAYYAIL 82 (546)
T ss_pred CCHHHHHHHHHHHc----CCCcceeec--CceecHHHHHHHHHHHHHHHHH-hhCCCCCCEEEEECCCChHHHHHHHHHH
Confidence 78999999999999 999999987 7899999999999999999998 6 99999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc----CCe-EEEEcCC----------------------
Q 012774 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHR-TILIDSP---------------------- 169 (456)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~~~-~~~~~~~---------------------- 169 (456)
++|++++|+++..+.+++.++++.++++++|++++....+... ... +++....
T Consensus 83 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (546)
T PRK08314 83 RANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQ 162 (546)
T ss_pred HcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhccCcceEEEecchhhcccccccCcccccccccccc
Confidence 9999999999999999999999999999999998776655432 112 1111100
Q ss_pred --------chhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEec
Q 012774 170 --------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTM 241 (456)
Q Consensus 170 --------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~ 241 (456)
.+++..... ..........+++++++|||||||.||+|.++|+++..++......+ .....|++++.+
T Consensus 163 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~l~~~ 238 (546)
T PRK08314 163 ALAPGGVVAWKEALAAG---LAPPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWS-NSTPESVVLAVL 238 (546)
T ss_pred cccccccccHHHHhccc---CCCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhh-CCCCCceEEEEc
Confidence 011111000 01112234668999999999999999999999999998888776666 678899999999
Q ss_pred chhhHhhH-HHHHHHhHhcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCC
Q 012774 242 PYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLG 320 (456)
Q Consensus 242 p~~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~ 320 (456)
|++|.+|+ ..++.++..|+++++.+.+++..+++.++++++|++.++|+++..+.........+++++|.+++||++++
T Consensus 239 p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~ 318 (546)
T PRK08314 239 PLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGGAAMP 318 (546)
T ss_pred CchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeeccccCC
Confidence 99999998 56778999999999999999999999999999999999999999998765555567889999999999999
Q ss_pred HHHHHHHHHhCCCCceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcc
Q 012774 321 KDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIM 400 (456)
Q Consensus 321 ~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~ 400 (456)
+++++++.+.+ +.++++.||+||++...... .......+++|.|+++++++|+|+++++.++.|+.|||+++|++++
T Consensus 319 ~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~--~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~ 395 (546)
T PRK08314 319 EAVAERLKELT-GLDYVEGYGLTETMAQTHSN--PPDRPKLQCLGIPTFGVDARVIDPETLEELPPGEVGEIVVHGPQVF 395 (546)
T ss_pred HHHHHHHHHHc-CCcEEecccccccccceecC--CCcCCCCCccCcccCCeEEEEEeCCCCcCCCCCCceEEEEECCchh
Confidence 99999999988 78999999999998765442 2222345789999999999999988899999999999999999999
Q ss_pred cccCCCccccccccCC---CCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 401 KGYVGEPEVTSATLLP---DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 401 ~gy~~~~~~~~~~~~~---~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
.||+++++.+++.|.. ++||+|||+|+++++|++++.||.||+||++|++|+|.||
T Consensus 396 ~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eI 454 (546)
T PRK08314 396 KGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEV 454 (546)
T ss_pred ccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHH
Confidence 9999999988887642 3599999999999999999999999999999999999875
No 25
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=2.6e-60 Score=481.04 Aligned_cols=409 Identities=24% Similarity=0.387 Sum_probs=345.7
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCC----CceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYF 113 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~----~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~l 113 (456)
.++.+.+.+.++.+ |+++|+++... .+++||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++
T Consensus 24 ~~l~~~l~~~a~~~----p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~Val~~~n~~e~~~~~l 98 (547)
T PRK13295 24 RTINDDLDACVASC----PDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLAR-LGVGRGDVVSCQLPNWWEFTVLYL 98 (547)
T ss_pred CCHHHHHHHHHHHC----CCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCChHHHHHHH
Confidence 68999999999999 99999998631 2799999999999999999998 899999999999999999999999
Q ss_pred HHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccch-----HH---HHh-cc-CC-eEEEEcCC---chhhhhccc-
Q 012774 114 SLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSV-----VH---KLA-KL-KH-RTILIDSP---EFDSMTMSW- 178 (456)
Q Consensus 114 a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~---~~~-~~-~~-~~~~~~~~---~~~~~~~~~- 178 (456)
||+++|++++|+++.++.+++.++++.++++++++++.. .+ .+. .. .. .++.++.. ++.++....
T Consensus 99 a~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (547)
T PRK13295 99 ACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGGDGADSFEALLITPA 178 (547)
T ss_pred HHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecCCCccCHHHHhhCCc
Confidence 999999999999999999999999999999999998753 11 111 11 11 23333321 233332111
Q ss_pred -C--CC--ccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhH-HHH
Q 012774 179 -N--SK--HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFC 252 (456)
Q Consensus 179 -~--~~--~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~ 252 (456)
. .. ..........+++++++|||||||.||+|+++|+++..++......+ ....++++++.+|++|..++ ..+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~l~~~p~~h~~g~~~~~ 257 (547)
T PRK13295 179 WEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERL-GLGADDVILMASPMAHQTGFMYGL 257 (547)
T ss_pred cccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHh-CCCCCCeEEEecCchhhhhHHHHH
Confidence 0 00 01111234568999999999999999999999999988887766666 67889999999999999987 567
Q ss_pred HHHhHhcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCC
Q 012774 253 FRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFP 332 (456)
Q Consensus 253 ~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~ 332 (456)
+.++..|+++++.+.+++..+++.++++++|++.++|+++..+..........++++|.+++||+++++++.+++++.+
T Consensus 258 ~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~- 336 (547)
T PRK13295 258 MMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLCAGAPIPGALVERARAAL- 336 (547)
T ss_pred HHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEEecCCCCHHHHHHHHHHh-
Confidence 8899999999999888999999999999999999999999999987666666789999999999999999999999998
Q ss_pred CCceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCcccccc
Q 012774 333 KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSA 412 (456)
Q Consensus 333 ~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~ 412 (456)
++++++.||+||++.+.+............++|+|+++++++|+| +++++++.|+.|||+|+|+.++.||+++++.+..
T Consensus 337 ~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~ 415 (547)
T PRK13295 337 GAKIVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVD-ADGAPLPAGQIGRLQVRGCSNFGGYLKRPQLNGT 415 (547)
T ss_pred CCCeEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEEC-CCCCCCCCCCCCeEEEEcCcccccccCCcccccc
Confidence 899999999999987655432222223346889999999999999 6788999999999999999999999999998877
Q ss_pred ccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 413 TLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 413 ~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
. .+|||+|||+|+++++|++++.||.||+||++|++|+|.|+
T Consensus 416 ~--~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~I 457 (547)
T PRK13295 416 D--ADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEI 457 (547)
T ss_pred C--CCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHH
Confidence 6 57899999999999999999999999999999999999764
No 26
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=8.2e-62 Score=476.41 Aligned_cols=393 Identities=33% Similarity=0.522 Sum_probs=323.1
Q ss_pred hhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEe
Q 012774 44 VSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIIS 123 (456)
Q Consensus 44 l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v 123 (456)
|.++|+++ ||++|+++ +.++++||+||.++++++|..|.+ +|+++||+|+++++|+++++++++||+++|++++
T Consensus 1 f~~~a~~~----pd~~a~~~-~~~~~~Ty~~l~~~v~~la~~L~~-~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v 74 (417)
T PF00501_consen 1 FERQAQRY----PDRIALID-DEGRSLTYKQLYERVRKLAAALRK-LGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPV 74 (417)
T ss_dssp HHHHHHHS----TTSEEEEE-TTTEEEEHHHHHHHHHHHHHHHHH-TTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEE
T ss_pred ChhHHhhC----CCceEEEE-CCCEEEEHHHHHHHHHHHhhHHHH-hCCCccccccccCCccceeeeeeccccccccccc
Confidence 45677888 99999999 348999999999999999999997 9999999999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHhhhcCCeEEEE----ccchHHHHh---c---cCCeEEEEcCCch---hhhhcccCCCccccccC-C
Q 012774 124 PANPVNTESEISRQIQLSNPVIAFA----TSSVVHKLA---K---LKHRTILIDSPEF---DSMTMSWNSKHELDRAK-V 189 (456)
Q Consensus 124 ~l~~~~~~~~l~~~l~~~~~~~vi~----~~~~~~~~~---~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~ 189 (456)
|++|.++.+++.++++.++++++|+ +......+. . ....++.++...+ +.+....... ... .. .
T Consensus 75 ~l~~~~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~ 152 (417)
T PF00501_consen 75 PLDPSLSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRDDLPKKEALKSASLSD-EPQ-SPED 152 (417)
T ss_dssp EEETTSSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHSSCTTCHHHHHHHHCH-CSH-STTH
T ss_pred ccccccccccccccccccceeEEEEeccccccccccchhhhcccccccccccccccccccccccccccccc-ccc-cCCC
Confidence 9999999999999999999999997 222222222 1 1122444442221 1111110000 000 00 1
Q ss_pred CCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhc--cCCCCCCCCcEEEEecchhhHhhH-HHHHHHhHhcceEEEec
Q 012774 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSF--ASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQ 266 (456)
Q Consensus 190 ~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~~~~~ 266 (456)
.++++++++|||||||.||+|.++|+++.+.+.... ... ... |++++.+|++|.+++ ..++.++..|+++++.+
T Consensus 153 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~-~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 229 (417)
T PF00501_consen 153 SPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYF-GLG--DRILSFLPLSHIFGLISALLAALFSGATLVLPS 229 (417)
T ss_dssp TTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTT-TTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEES
T ss_pred CccceeEeecccccccccccccccccccccccccccccccc-ccC--ceEEeeccccccccccccccccccccccccccc
Confidence 568999999999999999999999999998877753 222 222 599999999999999 88999999999999998
Q ss_pred CCC---HHHHHHHHHHhcceeEEecHHHHHHHhcCCCC----CCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEec
Q 012774 267 RFD---LKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST----DGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQA 339 (456)
Q Consensus 267 ~~~---~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~----~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~ 339 (456)
..+ ++.+++.++++++|+++++|+++..+++.... ...+++++|.+++||+++++++.+++++.++..++++.
T Consensus 230 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~ 309 (417)
T PF00501_consen 230 PFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDLLRRLRKAFGNAPIINL 309 (417)
T ss_dssp SHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHHHHHHHHHHTTSEEEEE
T ss_pred cccccccccchhcccccccccccccccccccccccccccccccccccccccccccccccCChhhccccccccccccceec
Confidence 754 47789999999999999999999999983222 23578899999999999999999999999955699999
Q ss_pred cCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCe
Q 012774 340 YGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGW 419 (456)
Q Consensus 340 yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~ 419 (456)
||+||++.+++.........+.+++|.|+|+++++|+|++++++++.|+.|||+|+|+.++.||+++++.+.+.|..+||
T Consensus 310 YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~ 389 (417)
T PF00501_consen 310 YGSTETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGW 389 (417)
T ss_dssp EEEGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTTTSSBESTTSEEEEEEESTTSBSEETTBHHHHHHHEETTSE
T ss_pred ccccccceeeecccccccccccccccccccccccccccccccccccccccccccccCCccceeeeccccccccccccccc
Confidence 99999999887543233444678899999999999999777999999999999999999999999999999999976689
Q ss_pred eeccceEEEccCCcEEEecccccceeeC
Q 012774 420 MRTGDLCYIDEDGFLFIVDRLKDLIKYK 447 (456)
Q Consensus 420 ~~TGDl~~~~~dg~l~~~GR~~d~ik~~ 447 (456)
|+|||+|++|+||+++++||.||+||++
T Consensus 390 ~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 390 YRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp EEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred eecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 9999999999999999999999999985
No 27
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=8e-60 Score=485.32 Aligned_cols=414 Identities=20% Similarity=0.269 Sum_probs=334.0
Q ss_pred CCCCCHHH-HhhhcccCCCCCCCCCcEEEECC----CCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHH
Q 012774 35 DAPISAVD-YVSSLRATLPWRDDDTVALINSV----TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP 109 (456)
Q Consensus 35 ~~~~~~~~-~l~~~~~~~~~~~p~~~A~~~~~----~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~ 109 (456)
++.+|+.. .+.+.++++ |+++|+++.. ..+++||+||.++++++|+.|.+ +|+++||+|+++++|+++++
T Consensus 63 ~~~~n~~~~~l~~~~~~~----p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~~ 137 (637)
T PRK00174 63 DGELNVSYNCLDRHLKTR----GDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKS-LGVKKGDRVAIYMPMIPEAA 137 (637)
T ss_pred CCEeEHHHHHHHHhhccC----CCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHH
Confidence 45567655 455566677 9999998642 23589999999999999999998 99999999999999999999
Q ss_pred HHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchH---------HHH----hcc-CC-eEEEEcCC-----
Q 012774 110 ILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV---------HKL----AKL-KH-RTILIDSP----- 169 (456)
Q Consensus 110 ~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~----~~~-~~-~~~~~~~~----- 169 (456)
++++||+++|++++|+++.++.+++.+++++++++++|+++... ..+ ... .. .+++++..
T Consensus 138 ~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (637)
T PRK00174 138 VAMLACARIGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGGDVD 217 (637)
T ss_pred HHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCCCcC
Confidence 99999999999999999999999999999999999999976532 111 111 11 23333211
Q ss_pred -------chhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecc
Q 012774 170 -------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMP 242 (456)
Q Consensus 170 -------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p 242 (456)
.+.++..... ..........+++++++|||||||.||+|+++|++++.+.............+|++++..|
T Consensus 218 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 295 (637)
T PRK00174 218 WVEGRDLWWHELVAGAS--DECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTAD 295 (637)
T ss_pred cCCCCcccHHHHHhhcC--CCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCC
Confidence 1222222111 0111223466899999999999999999999999987654433322225677899999999
Q ss_pred hhhHhhH-HHHHHHhHhcceEEEecC----CCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCC--CCCCCCCceEEEec
Q 012774 243 YFHIYGL-FFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACG 315 (456)
Q Consensus 243 ~~~~~g~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~v~~g 315 (456)
++|..+. ..++.++..|+++++.+. +++..+++.|+++++|++.++|++++.|++.... ...+++++|.+++|
T Consensus 296 ~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~ 375 (637)
T PRK00174 296 VGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSV 375 (637)
T ss_pred chHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEe
Confidence 9999887 567889999999998753 4799999999999999999999999999886432 23567899999999
Q ss_pred CCCCCHHHHHHHHHhCC--CCceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEE
Q 012774 316 AAPLGKDTIMAFASKFP--KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELS 393 (456)
Q Consensus 316 G~~~~~~~~~~~~~~~~--~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~ 393 (456)
|+++++++.+++.+.++ ++++++.||+||++..+..........+.+++|+|++|++++|+| +++++++.|+.|||+
T Consensus 376 Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d-~~g~~~~~g~~Gel~ 454 (637)
T PRK00174 376 GEPINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGATPLKPGSATRPLPGIQPAVVD-EEGNPLEGGEGGNLV 454 (637)
T ss_pred CCCCCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCCCCCcCCCcccCCCCCceEEEEC-CCCCCCCCCCcEEEE
Confidence 99999999999998874 378999999999987655422211223467899999999999999 778999999999999
Q ss_pred Eec--CCcccccCCCccccccccC--CCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 394 IRG--PTIMKGYVGEPEVTSATLL--PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 394 i~g--~~~~~gy~~~~~~~~~~~~--~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
++| |+++.||+++++.+.+.+. .+|||+|||+|++|+||+++|.||.||+||++|++|+|.||
T Consensus 455 v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eI 521 (637)
T PRK00174 455 IKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEI 521 (637)
T ss_pred EcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHH
Confidence 999 6899999999987776652 37899999999999999999999999999999999999875
No 28
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.4e-60 Score=477.88 Aligned_cols=400 Identities=22% Similarity=0.295 Sum_probs=337.6
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
.++.++|.+.++++ |+++|+++. ++++||+||.++++++|+.|.+ +|+++||+|+++++|+++++++++||++
T Consensus 43 ~~~~~~l~~~a~~~----p~~~a~~~~--~~~~Ty~el~~~~~~~A~~L~~-~g~~~g~~V~i~~~n~~~~~~~~lA~~~ 115 (537)
T PRK13382 43 MGPTSGFAIAAQRC----PDRPGLIDE--LGTLTWRELDERSDALAAALQA-LPIGEPRVVGIMCRNHRGFVEALLAANR 115 (537)
T ss_pred CCHHHHHHHHHHhC----CCCeEEEeC--CCeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEecCcHHHHHHHHHHHH
Confidence 68999999999999 999999987 7799999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc------CCeEEEEcCC----chhhhhcccCCCcccccc
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL------KHRTILIDSP----EFDSMTMSWNSKHELDRA 187 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 187 (456)
+|++++|+++.++.+++.++++.++++++|++.+....+... ...++.++.. .++.+..... . ...
T Consensus 116 ~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~ 191 (537)
T PRK13382 116 IGADILLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTDEDHDLTVEVLIAAHA---G-QRP 191 (537)
T ss_pred cCcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecCCcccccHHHHhhccC---c-CCC
Confidence 999999999999999999999999999999998766544321 1112222211 1222221111 0 011
Q ss_pred CCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEecC
Q 012774 188 KVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR 267 (456)
Q Consensus 188 ~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~ 267 (456)
....++.++++|||||||.||+|+++|+++..........+ ....+++++...|++|.+++..++.++..|+++++...
T Consensus 192 ~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~g~~~~~~~l~~g~~~~~~~~ 270 (537)
T PRK13382 192 EPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRT-PWRAEEPTVIVAPMFHAWGFSQLVLAASLACTIVTRRR 270 (537)
T ss_pred CCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhh-CCCCCCeEEEecChHhhhHHHHHHHHHhcCcEEEECCC
Confidence 23457889999999999999999999998887777666655 56788899999999999999888899999999999889
Q ss_pred CCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCC--CCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCcccc
Q 012774 268 FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTES 345 (456)
Q Consensus 268 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~ 345 (456)
++++.+++.|+++++|++.++|+++..|++.... ...+++++|.+++||+++++++++.|.+.+ +.++++.||+||+
T Consensus 271 ~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~i~~~YG~TE~ 349 (537)
T PRK13382 271 FDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQF-GDVIYNNYNATEA 349 (537)
T ss_pred cCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHc-CCcEEeccccccc
Confidence 9999999999999999999999999999876432 234567899999999999999999999998 6789999999999
Q ss_pred ccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccce
Q 012774 346 TAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDL 425 (456)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl 425 (456)
+.++..... ......+++|+|+++++++|+| +++++++.|+.|||+++|+.++.||+ ++.+.. + .+|||+|||+
T Consensus 350 ~~~~~~~~~-~~~~~~~~vG~p~~~~~~~i~d-~~~~~~~~g~~GEl~v~g~~~~~gY~--~~~~~~-~-~~g~~~TGDl 423 (537)
T PRK13382 350 GMIATATPA-DLRAAPDTAGRPAEGTEIRILD-QDFREVPTGEVGTIFVRNDTQFDGYT--SGSTKD-F-HDGFMASGDV 423 (537)
T ss_pred CcceecChh-HhccCCCCccccCcCcEEEEEC-CCCCCCCCCCeeEEEEEcCCcccCcc--ccchhh-c-cCCCEeeCce
Confidence 876554321 1223567899999999999999 67889999999999999999999998 444433 4 3799999999
Q ss_pred EEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 426 CYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 426 ~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+++++||++++.||.||+||++|++|+|.|+
T Consensus 424 ~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eI 454 (537)
T PRK13382 424 GYLDENGRLFVVGRDDEMIVSGGENVYPIEV 454 (537)
T ss_pred EEEeCCCcEEEeccccceeEECCEEECHHHH
Confidence 9999999999999999999999999999874
No 29
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=3.4e-60 Score=481.07 Aligned_cols=405 Identities=23% Similarity=0.345 Sum_probs=331.0
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCC--------ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTG--------LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP 109 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~--------~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~ 109 (456)
+|+.+++.+.++++ |+++|+++.+.+ +++||+||.++++++|+.|.+ .|+++||+|+++++|+++++
T Consensus 6 ~~~~~~l~~~a~~~----p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~-~g~~~gd~V~~~~~n~~~~~ 80 (552)
T PRK09274 6 ANIARHLPRAAQER----PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNA-AGIGRGMRAVLMVTPSLEFF 80 (552)
T ss_pred hhHHHHHHHHHHhC----CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCcHHHH
Confidence 68999999999988 999999885322 289999999999999999998 89999999999999999999
Q ss_pred HHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEcc--chHHHHhcc---CC-eEEEEcC------Cchhhhhcc
Q 012774 110 ILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS--SVVHKLAKL---KH-RTILIDS------PEFDSMTMS 177 (456)
Q Consensus 110 ~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~--~~~~~~~~~---~~-~~~~~~~------~~~~~~~~~ 177 (456)
++++||+++|++++|++|.++.+++.++++.++++++|+++ .....+... .. .++.++. ..+.++...
T Consensus 81 ~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 160 (552)
T PRK09274 81 ALTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWGKPSVRRLVTVGGRLLWGGTTLATLLRD 160 (552)
T ss_pred HHHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccCccchhheeccccccccCCccHHHhccc
Confidence 99999999999999999999999999999999999999875 222222211 11 1222221 123332211
Q ss_pred cCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhH
Q 012774 178 WNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAA 257 (456)
Q Consensus 178 ~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~ 257 (456)
.. ..........++++++++|||||||.||+|.++|+++...+......+ ...++++.++.+|++|.+++ .
T Consensus 161 ~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~~~~~pl~~~~~~-------~ 231 (552)
T PRK09274 161 GA-AAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDY-GIEPGEIDLPTFPLFALFGP-------A 231 (552)
T ss_pred Cc-cccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHh-CCCCCceeeeccCHHHhhhh-------h
Confidence 11 011122334668999999999999999999999999998887766666 67788999999999876543 3
Q ss_pred hcceEEEec-------CCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHh
Q 012774 258 LMETAVVMQ-------RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASK 330 (456)
Q Consensus 258 ~G~~~~~~~-------~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~ 330 (456)
.|+++++.+ .++++.+++.|+++++|+++++|+++..|.+.......+++++|.+++||+++++++.+++++.
T Consensus 232 ~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~ 311 (552)
T PRK09274 232 LGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRRVISAGAPVPIAVIERFRAM 311 (552)
T ss_pred hCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEecCCcCCHHHHHHHHHH
Confidence 577777654 4689999999999999999999999999998765556678999999999999999999999999
Q ss_pred CC-CCceEeccCccccccccccccCC------C--CCCCCCccccccCCcEEEEEcCC--------CCCCCCCCCcceEE
Q 012774 331 FP-KVVLVQAYGLTESTAGVFRTVGP------D--ECRRWGSTGRLSAGLEAKIVDPE--------TGDSLPPGKEGELS 393 (456)
Q Consensus 331 ~~-~~~i~~~yG~tE~~~~~~~~~~~------~--~~~~~~~~G~~~~~~~~~i~d~~--------~~~~~~~g~~Gel~ 393 (456)
++ ++++++.||+||++.+++..... . ......++|+|+++++++|+|+. +++.++.|+.|||+
T Consensus 312 ~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g~~Gel~ 391 (552)
T PRK09274 312 LPPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLATGEIGEIV 391 (552)
T ss_pred cCCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEeccccccccccccccCCCCCeeEEE
Confidence 96 48999999999998765432111 0 11122478999999999999853 46788999999999
Q ss_pred EecCCcccccCCCcccccccc--CCCC--eeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 394 IRGPTIMKGYVGEPEVTSATL--LPDG--WMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 394 i~g~~~~~gy~~~~~~~~~~~--~~~g--~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
++|+.++.||+++++.+...+ +.+| ||+|||+|++|+||++++.||.||+||++|++|+|.||
T Consensus 392 v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~eI 458 (552)
T PRK09274 392 VAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTLYTIPC 458 (552)
T ss_pred EecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeEEECCEEECcHHH
Confidence 999999999999999888765 3356 99999999999999999999999999999999999875
No 30
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2e-60 Score=489.21 Aligned_cols=422 Identities=24% Similarity=0.321 Sum_probs=334.6
Q ss_pred ceeeCCCCCCCCCCCCCCCCHHHHhhhcccCCCCCCCCCcEEEECC-------CCceecHHHHHHHHHHHHHHhHhhcCC
Q 012774 20 KTFHSLRPPIDLPPEDAPISAVDYVSSLRATLPWRDDDTVALINSV-------TGLRVSFSEFTRRTNSLASYLQNVTRL 92 (456)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~A~~~~~-------~~~~~Ty~eL~~~~~~~a~~L~~~~gi 92 (456)
|.|+.+.+....-.+....|+.++|.+.++.+ |+++|+++.+ ..+.+||+||.++++++|+.|.+ . +
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~----~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~-~ 76 (631)
T PRK07769 3 MAFHNPFDVNGKIRFPPNTNLVRHVERWAKVR----GDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQ-V-T 76 (631)
T ss_pred cccCCcccccccccccccCCHHHHHHHHHHhC----CCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHH-h-c
Confidence 34444443332222334479999999999888 9999998631 12589999999999999999988 5 8
Q ss_pred CCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecC-CCCCC--HHHHHHHhhhcCCeEEEEccchHHHHhcc----C----C
Q 012774 93 SKNDTAFVLSTNSIEIPILYFSLLSLGVIISPA-NPVNT--ESEISRQIQLSNPVIAFATSSVVHKLAKL----K----H 161 (456)
Q Consensus 93 ~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~----~ 161 (456)
++||+|+++++|++++++++|||+++|++++|+ ++..+ .+++.+++++++++++|++++....+.+. . .
T Consensus 77 ~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~ 156 (631)
T PRK07769 77 KPGDRVAILAPQNLDYLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERP 156 (631)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccc
Confidence 999999999999999999999999999999999 45554 67899999999999999998765544321 1 1
Q ss_pred eEEEEcCCchhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEec
Q 012774 162 RTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTM 241 (456)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~ 241 (456)
.++.++.. .. ... . ........++++++++|||||||.||+|+++|+++...+......+ ....++++++++
T Consensus 157 ~~~~~~~~--~~---~~~-~-~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~d~~l~~~ 228 (631)
T PRK07769 157 RVIAVDAV--PD---EVG-A-TWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDAL-EGQEGDRGVSWL 228 (631)
T ss_pred eEEEcccc--cc---ccc-c-ccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHc-CCCCcceEEEeC
Confidence 22222211 00 000 0 1111234568999999999999999999999999988877666665 577889999999
Q ss_pred chhhHhhHHHHHHHhHhcceEEEecC--C--CHHHHHHHHHHhcc---eeEEecHHHHHHHhcC---CC--CCCCCCCCc
Q 012774 242 PYFHIYGLFFCFRAAALMETAVVMQR--F--DLKMMLKAVEEFRV---THAAVTPPIVVAMSKG---GS--TDGYDLSSL 309 (456)
Q Consensus 242 p~~~~~g~~~~~~~l~~G~~~~~~~~--~--~~~~~~~~i~~~~~---t~~~~~P~~~~~l~~~---~~--~~~~~l~~l 309 (456)
|++|.+|+...+.+++.|+++++... + ++..+++.+.++++ +.+.++|+++..+... .. ....+++++
T Consensus 229 Pl~h~~gl~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~l 308 (631)
T PRK07769 229 PFFHDMGLITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNV 308 (631)
T ss_pred CCcCchhhHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhhe
Confidence 99999999777778888999888752 4 89999999999886 7889999988766542 11 113568899
Q ss_pred eEEEecCCCCCHHHHHHHHHhCC-----CCceEeccCccccccccccccCCCC-------------------------CC
Q 012774 310 ETVACGAAPLGKDTIMAFASKFP-----KVVLVQAYGLTESTAGVFRTVGPDE-------------------------CR 359 (456)
Q Consensus 310 r~v~~gG~~~~~~~~~~~~~~~~-----~~~i~~~yG~tE~~~~~~~~~~~~~-------------------------~~ 359 (456)
|.+++||+++++++.++|.+.|+ ...+++.||+||++..++....... ..
T Consensus 309 r~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 388 (631)
T PRK07769 309 KGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAV 388 (631)
T ss_pred eeEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCce
Confidence 99999999999999999999872 3469999999998765543221110 00
Q ss_pred CCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCC-----------------CCeeec
Q 012774 360 RWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP-----------------DGWMRT 422 (456)
Q Consensus 360 ~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~-----------------~g~~~T 422 (456)
...++|+|.++.+++|+|+++++.++.|+.|||+|+|++++.||+++++.+++.|.. +|||+|
T Consensus 389 ~~~s~G~~~~~~~~~ivd~~~g~~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~T 468 (631)
T PRK07769 389 AQVSAGKVGVSEWAVIVDPETASELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRT 468 (631)
T ss_pred eEEeCCCcCCCcEEEEEcCCCCcCCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeec
Confidence 124789999999999999778999999999999999999999999999999888742 489999
Q ss_pred cceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 423 GDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 423 GDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
||+|++ +||+|+|+||.||+||++|++|+|.||
T Consensus 469 GDlg~~-~dG~l~i~GR~~d~Ik~~G~~V~p~eI 501 (631)
T PRK07769 469 GDYGVY-FDGELYITGRVKDLVIIDGRNHYPQDL 501 (631)
T ss_pred cccccE-ECCEEEEEcccccEEEECCeeeCHHHH
Confidence 999999 499999999999999999999999875
No 31
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.7e-60 Score=471.38 Aligned_cols=399 Identities=19% Similarity=0.297 Sum_probs=340.4
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
|++.+.|.+.++++ |+++|+++. +.++||.||.++++++|+.|.+ .| .+|++|+|+++|+++++++++||++
T Consensus 1 ~~~~~~~~~~a~~~----p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~~-~~~~~v~i~~~~~~~~~~~~la~~~ 72 (487)
T PRK07638 1 MGITKEYKKHASLQ----PNKIAIKEN--DRVLTYKDWFESVCKVANWLNE-KE-SKNKTIAILLENRIEFLQLFAGAAM 72 (487)
T ss_pred CChHHHHHHHHHhC----CCCeEEecC--CcEeeHHHHHHHHHHHHHHHHH-hC-CCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 57889999999998 999999987 7899999999999999999998 67 4899999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhccCCeEEEEcCCchhhhhcccCCCccccccCCCCCCEEEE
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAI 197 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i 197 (456)
+|++++|+++.++.+++.++++.++++++++++.....+.....+++.++ .+......... .........++++++
T Consensus 73 ~G~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~a~i 148 (487)
T PRK07638 73 AGWTCVPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDEEGRVIEID--EWKRMIEKYLP--TYAPIENVQNAPFYM 148 (487)
T ss_pred cCeEEEecCccCCHHHHHHHHHhCCCCEEEEecccccchhhccceEEEeh--hhhhhhhhccc--cccccccCCCCcEEE
Confidence 99999999999999999999999999999999866555443333333332 22222111110 111122345678999
Q ss_pred EcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEecCCCHHHHHHHH
Q 012774 198 MYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAV 277 (456)
Q Consensus 198 ~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i 277 (456)
+|||||||.||+|+++|+++..++......+ ....+|+++...|++|..++...+.++..|+++++.+.+++..+++.|
T Consensus 149 ~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~~~~~~~~~~~~i 227 (487)
T PRK07638 149 GFTSGSTGKPKAFLRAQQSWLHSFDCNVHDF-HMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLMRKFIPNQVLDKL 227 (487)
T ss_pred EeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-CcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEcCCCCHHHHHHHH
Confidence 9999999999999999999988887766666 678889999999999998888888999999999999999999999999
Q ss_pred HHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccCCCC
Q 012774 278 EEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDE 357 (456)
Q Consensus 278 ~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~ 357 (456)
+++++|++.++|+++..|.+... ...+.+.++++|++++.++.+++++.+++.++++.||+||++.++.... ...
T Consensus 228 ~~~~~t~~~~~P~~~~~l~~~~~----~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~-~~~ 302 (487)
T PRK07638 228 ETENISVMYTVPTMLESLYKENR----VIENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFVTALVD-EES 302 (487)
T ss_pred HHcCCeEEEeCcHHHHHHHhCcC----cCCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCceEEecc-ccc
Confidence 99999999999999999988622 2345667788999999999999999999999999999999987655432 223
Q ss_pred CCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEe
Q 012774 358 CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIV 437 (456)
Q Consensus 358 ~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~ 437 (456)
....+++|+|+++++++|+| +++.++++|+.|||+++|+.++.||+++++.+.+.+ .+|||+|||+|++|+||++++.
T Consensus 303 ~~~~~~~G~~~~~~~~~i~d-~~g~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~d~~g~l~i~ 380 (487)
T PRK07638 303 ERRPNSVGRPFHNVQVRICN-EAGEEVQKGEIGTVYVKSPQFFMGYIIGGVLARELN-ADGWMTVRDVGYEDEEGFIYIV 380 (487)
T ss_pred CCCCCCCCcccCCcEEEEEC-CCCCCCCCCCCeEEEEecccceeeecCCHHHHhhhc-cCCcEecCccEeEcCCCeEEEE
Confidence 34567899999999999999 678999999999999999999999999998776654 6899999999999999999999
Q ss_pred cccccceeeCCeeecCCCC
Q 012774 438 DRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 438 GR~~d~ik~~G~~v~p~e~ 456 (456)
||.+|+||++|++|+|.|+
T Consensus 381 GR~~d~i~~~G~~v~~~ei 399 (487)
T PRK07638 381 GREKNMILFGGINIFPEEI 399 (487)
T ss_pred ecCCCeEEeCCEEECHHHH
Confidence 9999999999999999764
No 32
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.6e-60 Score=473.87 Aligned_cols=401 Identities=27% Similarity=0.416 Sum_probs=344.0
Q ss_pred CHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHh
Q 012774 39 SAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSL 118 (456)
Q Consensus 39 ~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~ 118 (456)
.+.+.+.+.++.+ |+++|++++ ++.+||+||.++++++|+.|++++|+.+|++|+++++|+++++++++||+++
T Consensus 3 ~~~~~~~~~a~~~----p~~~a~~~~--~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~ 76 (496)
T PRK06839 3 GIAYWIEKRAYLH----PDRIAIITE--EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKV 76 (496)
T ss_pred cHHHHHHHHHHHC----CCCeEEEEC--CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 5778889999988 999999987 8999999999999999999986479999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhccC-----CeEEEEcCCchhhhhcccCCCccccccCCCCCC
Q 012774 119 GVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK-----HRTILIDSPEFDSMTMSWNSKHELDRAKVCQSD 193 (456)
Q Consensus 119 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (456)
|++++|+++..+.+++..+++.++++++++++.....+.... ..++.+. ++.+..... .........++
T Consensus 77 G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~ 150 (496)
T PRK06839 77 ECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSYVQRVISIT--SLKEIEDRK----IDNFVEKNESA 150 (496)
T ss_pred CcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccCcceEEEec--chHhhhccC----CCCCCCCCCCC
Confidence 999999999999999999999999999999987765544321 1222222 222222211 11122345688
Q ss_pred EEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhH-HHHHHHhHhcceEEEecCCCHHH
Q 012774 194 VAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKM 272 (456)
Q Consensus 194 ~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~ 272 (456)
+++++|||||||.||+|.++|+++..+.......+ ....++++++.+|++|..++ ..++.++..|+++++.+.++++.
T Consensus 151 ~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~ 229 (496)
T PRK06839 151 SFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAI-DLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKFEPTK 229 (496)
T ss_pred cEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHc-CCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEccCCCHHH
Confidence 99999999999999999999999876665555555 57788999999999999988 45578899999999988899999
Q ss_pred HHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccc
Q 012774 273 MLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRT 352 (456)
Q Consensus 273 ~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~ 352 (456)
+++.++++++|++.++|++++.+++.......+++++|.+++||+++++++.+.+++. ++++.+.||+||++..+...
T Consensus 230 ~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~~~~ 307 (496)
T PRK06839 230 ALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDR--GFLFGQGFGMTETSPTVFML 307 (496)
T ss_pred HHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHh--CCeeEeeccCCCCCcceEec
Confidence 9999999999999999999999998876666678999999999999999999999986 89999999999998765443
Q ss_pred cCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCC
Q 012774 353 VGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDG 432 (456)
Q Consensus 353 ~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg 432 (456)
.........+++|+|+++++++|+| +++..++.|+.|||+|+|+.++.||+++++.+...+ .+|||+|||+|+++++|
T Consensus 308 ~~~~~~~~~~~~G~p~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g 385 (496)
T PRK06839 308 SEEDARRKVGSIGKPVLFCDYELID-ENKNKVEVGEVGELLIRGPNVMKEYWNRPDATEETI-QDGWLCTGDLARVDEDG 385 (496)
T ss_pred ccccccccCCCCcccCCCceEEEEC-CCcCCCCCCCceEEEEECCCcchhhcCChHHHHHHH-cCCCeeecceEEEcCCC
Confidence 3323334568999999999999999 566679999999999999999999999999988777 58999999999999999
Q ss_pred cEEEecccccceeeCCeeecCCCC
Q 012774 433 FLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 433 ~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
++++.||.||+||++|++|+|.|+
T Consensus 386 ~~~~~GR~~d~i~~~G~~v~p~~i 409 (496)
T PRK06839 386 FVYIVGRKKEMIISGGENIYPLEV 409 (496)
T ss_pred cEEEeccccceEEECCEEECHHHH
Confidence 999999999999999999999764
No 33
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-59 Score=471.15 Aligned_cols=406 Identities=27% Similarity=0.398 Sum_probs=347.2
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
+|+.+++.+.++.+ |+++|+++. ++.+||.||.++++++|..|.+ .|+.+|++|+++++|+++++++++||++
T Consensus 2 ~~~~~~~~~~~~~~----~~~~a~~~~--~~~~ty~el~~~v~~~a~~L~~-~g~~~~~~v~i~~~~~~~~~~~~la~~~ 74 (497)
T PRK06145 2 FNLSASIAFHARRT----PDRAALVYR--DQEISYAEFHQRILQAAGMLHA-RGIGQGDVVALLMKNSAAFLELAFAASY 74 (497)
T ss_pred ccHHHHHHHHHHHC----CCceEEEEC--CcceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 68899999999998 999999987 7899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhccCCeEEEEcCCc---hhhhhcccCCCccccccCCCCCCE
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPE---FDSMTMSWNSKHELDRAKVCQSDV 194 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 194 (456)
+|++++|+++..+.+++.++++.+++++++++++....... ....+.++... +..+... . ..........++++
T Consensus 75 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~ 151 (497)
T PRK06145 75 LGAVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVAL-ETPKIVIDAAAQADSRRLAQG-G-LEIPPQAAVAPTDL 151 (497)
T ss_pred cCcEEEecccccCHHHHHHHHHhcCCcEEEEccchhhhhhc-ccceEEecCcccchhHHHhcc-C-CCCCCCCCCCccce
Confidence 99999999999999999999999999999998776544321 12233333211 1111110 0 00111223567899
Q ss_pred EEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhH-HHHHHHhHhcceEEEecCCCHHHH
Q 012774 195 AAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMM 273 (456)
Q Consensus 195 a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~ 273 (456)
++++|||||||.||+|+++|+++..........+ +...+++++..+|++|.+++ ...+.++..|+++++.+.+++..+
T Consensus 152 a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~ 230 (497)
T PRK06145 152 VRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIAL-GLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIHREFDPEAV 230 (497)
T ss_pred EEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhh-CCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEECCcCCHHHH
Confidence 9999999999999999999999987665555555 67888999999999999888 445778899999999999999999
Q ss_pred HHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCcccccccccccc
Q 012774 274 LKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTV 353 (456)
Q Consensus 274 ~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~ 353 (456)
++.++++++|.+.++|+++..++........+++++|.+++||+++++++++.+.+.|++..+++.||+||++...+...
T Consensus 231 ~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~ 310 (497)
T PRK06145 231 LAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCSGDTLME 310 (497)
T ss_pred HHHHHHhCCeEEEehHHHHHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCCcceecc
Confidence 99999999999999999999998876655667889999999999999999999999998899999999999987655432
Q ss_pred CCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCc
Q 012774 354 GPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGF 433 (456)
Q Consensus 354 ~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~ 433 (456)
........+++|+|+++++++++| ++++.++.|+.|||+++|++++.||+++++.+.+.| .++||+|||+|++++||+
T Consensus 311 ~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~-~~~~~~TGDl~~~~~~g~ 388 (497)
T PRK06145 311 AGREIEKIGSTGRALAHVEIRIAD-GAGRWLPPNMKGEICMRGPKVTKGYWKDPEKTAEAF-YGDWFRSGDVGYLDEEGF 388 (497)
T ss_pred CccccccCCCcccCCCCceEEEEC-CCCCCCCCCCceEEEEECcchhhhhcCChHHHHHHH-hCCCeeccceEEEcCCCc
Confidence 222333567899999999999999 678889999999999999999999999999999888 589999999999999999
Q ss_pred EEEecccccceeeCCeeecCCCC
Q 012774 434 LFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 434 l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+++.||.||+||++|++|+|.|+
T Consensus 389 l~~~GR~~~~i~~~G~~v~~~~I 411 (497)
T PRK06145 389 LYLTDRKKDMIISGGENIASSEV 411 (497)
T ss_pred EEEeccccceEEeCCeEECHHHH
Confidence 99999999999999999999764
No 34
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2e-59 Score=475.87 Aligned_cols=409 Identities=27% Similarity=0.451 Sum_probs=337.7
Q ss_pred CCCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHH
Q 012774 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (456)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~ 116 (456)
..|+.+.+.+.++.+ |+++|+++. ++.+||+||.++++++|+.|.+..|+++||+|+++++|++++++++|||+
T Consensus 23 ~~~~~~~l~~~a~~~----p~~~al~~~--~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~ 96 (562)
T PRK05677 23 YPNIQAVLKQSCQRF----ADKPAFSNL--GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAM 96 (562)
T ss_pred cCcHHHHHHHHHHhC----CCCeeEEEC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 358999999999988 999999987 78999999999999999999863599999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhc----cCCeEEEEcC-Cc---------------------
Q 012774 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK----LKHRTILIDS-PE--------------------- 170 (456)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~----~~~~~~~~~~-~~--------------------- 170 (456)
++|++++|+++..+.+++.++++.++++++|+++.....+.+ ...+.+.+.. .+
T Consensus 97 ~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (562)
T PRK05677 97 RAGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAVVKHVKKMV 176 (562)
T ss_pred HcCeEEeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhccCcceeEEecccccccchhhhhcccchhhccccc
Confidence 999999999999999999999999999999998765543321 1222222210 00
Q ss_pred ----------hhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCC-CC-CCCcEEE
Q 012774 171 ----------FDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP-KR-VSPAVML 238 (456)
Q Consensus 171 ----------~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~-~~-~~~~~~~ 238 (456)
+.+...... ..........++++++++|||||||.||+|+++|+++..........+. .. ...++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 255 (562)
T PRK05677 177 PAYHLPQAVKFNDALAKGA-GQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILI 255 (562)
T ss_pred cccCCcccccHHHHHhcCC-CCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEE
Confidence 000000000 0011112345689999999999999999999999999876654443321 12 2447889
Q ss_pred EecchhhHhhH-HHHHHHhHhcceEEEec-CCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecC
Q 012774 239 FTMPYFHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGA 316 (456)
Q Consensus 239 ~~~p~~~~~g~-~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG 316 (456)
+.+|++|.+++ ..++.++..|++.++.+ .+++..+++.|+++++|+++++|+++..+..........++++|.+++||
T Consensus 256 ~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG 335 (562)
T PRK05677 256 APLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGG 335 (562)
T ss_pred EcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcC
Confidence 99999999998 45667777888766664 57899999999999999999999999999886554455678999999999
Q ss_pred CCCCHHHHHHHHHhCCCCceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEec
Q 012774 317 APLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRG 396 (456)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g 396 (456)
+++++++.+.|.+.+ ++++++.||+||++.++.... ....+.+++|+|+++++++|+| ++++.++.|+.|||+++|
T Consensus 336 ~~~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~--~~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g 411 (562)
T PRK05677 336 MALQLATAERWKEVT-GCAICEGYGMTETSPVVSVNP--SQAIQVGTIGIPVPSTLCKVID-DDGNELPLGEVGELCVKG 411 (562)
T ss_pred ccCCHHHHHHHHHHc-CCCeeccCCccccCcceeecC--ccCCCCCccCccCCCCEEEEEC-CCCCCCCCCCCeEEEEec
Confidence 999999999999987 899999999999987665432 2233457899999999999999 568899999999999999
Q ss_pred CCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 397 PTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 397 ~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+.++.||+++++.+.+.|..+|||+|||+|++|+||++++.||.+|+||++|++|+|.|+
T Consensus 412 ~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~ei 471 (562)
T PRK05677 412 PQVMKGYWQRPEATDEILDSDGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNEL 471 (562)
T ss_pred CccchhhcCCchhhhhccCCCCcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHHH
Confidence 999999999999999999889999999999999999999999999999999999999874
No 35
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.2e-59 Score=469.89 Aligned_cols=397 Identities=26% Similarity=0.367 Sum_probs=342.5
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
+|+++.|.+++..+ ||++|+++. ++.+||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||++
T Consensus 2 ~~~~~~l~~~a~~~----p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~-~g~~~~~~v~i~~~~~~~~~~~~la~~~ 74 (483)
T PRK03640 2 ETMPNWLKQRAFLT----PDRTAIEFE--EKKVTFMELHEAVVSVAGKLAA-LGVKKGDRVALLMKNGMEMILVIHALQQ 74 (483)
T ss_pred CcHHHHHHHHHHhC----CCceEEEeC--CeeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 68999999999999 999999988 7899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhccCCeEEEEcCCchhhhhcccCCCccccccCCCCCCEEEE
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAI 197 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i 197 (456)
+|++++|+++..+.+++..+++.++++.+++++........... ..++++....... .........++++++
T Consensus 75 ~G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~a~i 146 (483)
T PRK03640 75 LGAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGIS-------VKFAELMNGPKEE-AEIQEEFDLDEVATI 146 (483)
T ss_pred CCcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhcc-------ccHHHHhhccccc-CCCCCCCCCCCeEEE
Confidence 99999999999999999999999999999998776554432110 1133322221111 112223466899999
Q ss_pred EcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEecCCCHHHHHHHH
Q 012774 198 MYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAV 277 (456)
Q Consensus 198 ~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i 277 (456)
+|||||||.||+|.++|.++...+......+ +...+|++++.+|++|.+++..++.++..|+++++.+..++..+++.+
T Consensus 147 ~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i 225 (483)
T PRK03640 147 MYTSGTTGKPKGVIQTYGNHWWSAVGSALNL-GLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVEKFDAEKINKLL 225 (483)
T ss_pred EeCCCcCCCCcEEEEecHHHHHHHHHHHHhc-CCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHH
Confidence 9999999999999999999988776666665 678999999999999999998888999999999999999999999999
Q ss_pred HHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccCCCC
Q 012774 278 EEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDE 357 (456)
Q Consensus 278 ~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~ 357 (456)
+++++|++.++|+++..|....... ....++|.+++||+++++.+.+.+++. ++++++.||+||++..+........
T Consensus 226 ~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~~lr~~~~~g~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~ 302 (483)
T PRK03640 226 QTGGVTIISVVSTMLQRLLERLGEG-TYPSSFRCMLLGGGPAPKPLLEQCKEK--GIPVYQSYGMTETASQIVTLSPEDA 302 (483)
T ss_pred HHhCCcEEEeHHHHHHHHHhCcCcc-ccCCcceEEEEcCCCCCHHHHHHHHHh--CCCeeeeeccCcccccccccCcccc
Confidence 9999999999999999998764332 234689999999999999999998875 8999999999998765443222223
Q ss_pred CCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEe
Q 012774 358 CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIV 437 (456)
Q Consensus 358 ~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~ 437 (456)
....+++|+|+++++++|.+ + +++++.|+.|||+++|+.++.||+++++.+...| .+|||+|||++++++||++++.
T Consensus 303 ~~~~~~vG~p~~~~~~~i~~-~-~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~-~~~~~~tGDl~~~~~~g~l~~~ 379 (483)
T PRK03640 303 LTKLGSAGKPLFPCELKIEK-D-GVVVPPFEEGEIVVKGPNVTKGYLNREDATRETF-QDGWFKTGDIGYLDEEGFLYVL 379 (483)
T ss_pred cccCCCcccccCCcEEEEec-C-CCcCCCCCceEEEEECcchhhhhcCCHHHHHHHH-hcCCeeccceEEEcCCCCEEEe
Confidence 34568999999999999998 3 3789999999999999999999999999998888 5899999999999999999999
Q ss_pred cccccceeeCCeeecCCCC
Q 012774 438 DRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 438 GR~~d~ik~~G~~v~p~e~ 456 (456)
||+||++|++|++|+|.||
T Consensus 380 GR~~~~i~~~G~~v~~~~i 398 (483)
T PRK03640 380 DRRSDLIISGGENIYPAEI 398 (483)
T ss_pred ecccCeEEeCCEEECHHHH
Confidence 9999999999999999764
No 36
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.4e-61 Score=429.51 Aligned_cols=406 Identities=25% Similarity=0.319 Sum_probs=352.3
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
.++.+.|.+.|+++ ||++|++++ ++++||+||.++++++|..|++ +|+++||+|.+.++|..++++++||+++
T Consensus 28 ~~l~d~L~~~A~~~----pdriAv~d~--~~~~sY~eLdqr~d~LAa~l~~-lGi~~Gd~vlvQLpN~~ef~~~~FALlr 100 (542)
T COG1021 28 RTLTDILTDHAARY----PDRIAVIDG--ERRLSYAELDQRADRLAAGLRR-LGIKPGDTVLVQLPNVAEFYITFFALLR 100 (542)
T ss_pred CcHHHHHHHHHhhc----CCceEEecC--cccccHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCchHHHHHHHHHHHH
Confidence 68999999999999 999999998 8899999999999999999999 9999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchH--------HHHh-cc-CCeEEEEcCCc------hhhhhcccCCC
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV--------HKLA-KL-KHRTILIDSPE------FDSMTMSWNSK 181 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~--------~~~~-~~-~~~~~~~~~~~------~~~~~~~~~~~ 181 (456)
+|+.+|.--|.-...+|....+..+++.+|++.... ..+. +. ..+.+.+.... +..+.... .
T Consensus 101 lGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~~~~~~~~~~~~a--~ 178 (542)
T COG1021 101 LGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEHPSVLEAALCHPA--G 178 (542)
T ss_pred cCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCCcchhhhhhhCcc--c
Confidence 999999988888899999999999999999875322 2222 22 23444443221 11111111 1
Q ss_pred ccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhH--HHHHHHhHhc
Q 012774 182 HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL--FFCFRAAALM 259 (456)
Q Consensus 182 ~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~--~~~~~~l~~G 259 (456)
...+..+.+.+++++++.+.||||.||.++.+|....-++....+.+ ++.+..++++.+|..|-+-+ -..++.++.|
T Consensus 179 ~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC-~~~~~tvyL~~LP~AHNfplssPG~LGv~~ag 257 (542)
T COG1021 179 LFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEIC-GFDQQTVYLCALPAAHNFPLSSPGALGVFLAG 257 (542)
T ss_pred cCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhh-CcCccceEEEecccccCCCCCCcchhheeeec
Confidence 11223446778899999999999999999999999988888888888 89999999999999998887 5688999999
Q ss_pred ceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEec
Q 012774 260 ETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQA 339 (456)
Q Consensus 260 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~ 339 (456)
+++++.++.+++..+.+|+++++|+..++|.+...|++.......+++|||.+-+||+.+++++.++....+ ++.+.+.
T Consensus 258 G~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVGGarl~~~~Arrv~~~l-gC~LQQV 336 (542)
T COG1021 258 GTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVGGARLSATLARRVPAVL-GCQLQQV 336 (542)
T ss_pred cEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeecCcccCHHHHhhchhhh-CchHHHH
Confidence 999999999999999999999999999999999999999998889999999999999999999999999999 9999999
Q ss_pred cCccccccccccccCCCCCCCCCcccccc-CCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCC
Q 012774 340 YGLTESTAGVFRTVGPDECRRWGSTGRLS-AGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDG 418 (456)
Q Consensus 340 yG~tE~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g 418 (456)
|||.|.-...+.. ++....-..+-|+|+ |.-+++|+| .+|+++++|++|+|..+||.-.+|||+.|+.++..|+.+|
T Consensus 337 FGMAEGLvnyTRL-DDp~E~i~~TQGrPlsP~DEvrvvD-~dg~pv~pGE~G~LltRGPYTirGYyrap~HNa~aF~a~G 414 (542)
T COG1021 337 FGMAEGLVNYTRL-DDPPEIIIHTQGRPLSPDDEVRVVD-ADGNPVAPGEVGELLTRGPYTIRGYYRAPEHNARAFDADG 414 (542)
T ss_pred hhhhhhhhccccc-CCchHheeecCCCcCCCcceeEEec-CCCCCCCCCCcceeeecCCeeeeeeccCchhhhhccCcCC
Confidence 9999954333332 222223346789999 677999999 8899999999999999999999999999999999999999
Q ss_pred eeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 419 WMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 419 ~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+|+|||++++|+||++.+.||.||+|+.+|+||...|+
T Consensus 415 FYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEv 452 (542)
T COG1021 415 FYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEV 452 (542)
T ss_pred ceecCceeEecCCceEEEEeeehhhhccccchhhHHHH
Confidence 99999999999999999999999999999999987653
No 37
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.6e-60 Score=489.96 Aligned_cols=394 Identities=20% Similarity=0.251 Sum_probs=330.0
Q ss_pred CHHHHhhhcccC--CCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHH
Q 012774 39 SAVDYVSSLRAT--LPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (456)
Q Consensus 39 ~~~~~l~~~~~~--~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~ 116 (456)
|+.+++.+.+.. + ||++|+++. +.+||+||.++++++|+.|.+ .|+++||+|+|+++|+++++++++||+
T Consensus 5 ~~~~~~~~~a~~~~~----pd~~a~~~~---~~~Ty~eL~~~~~~lA~~L~~-~g~~~g~~V~i~~~~~~~~~~~~la~~ 76 (705)
T PRK06060 5 NLAGLLAEQASEAGW----YDRPAFYAA---DVVTHGQIHDGAARLGEVLRN-RGLSSGDRVLLCLPDSPDLVQLLLACL 76 (705)
T ss_pred CHHHHHHHHHhhccC----CCceEEEec---CceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 788999888775 5 899999864 479999999999999999998 899999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhccCCeEEEEcCCchhhhhcccCCCccccccCCCCCCEEE
Q 012774 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (456)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 196 (456)
++|++++|++|.++.+++.+++++++++++|++......+.... ++ . ...+................++++++
T Consensus 77 ~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~--~~--~---~~~~~~~~~~~~~~~~~~~~~~~~a~ 149 (705)
T PRK06060 77 ARGVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPSR--VA--E---AAELMSEAARVAPGGYEPMGGDALAY 149 (705)
T ss_pred HhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhcccc--cc--h---hhhhhhhccccCCCCCCCCCCCCeEE
Confidence 99999999999999999999999999999999876655443211 11 0 11111110000011112345688999
Q ss_pred EEcCCCCCCCCchhcccHHHHHHHHHHhc-cCCCCCCCCcEEEEecchhhHhhH-HHHHHHhHhcceEEEec-CCCHHHH
Q 012774 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSF-ASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQ-RFDLKMM 273 (456)
Q Consensus 197 i~~TSGtTG~PK~V~~th~~l~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~~~~~-~~~~~~~ 273 (456)
++|||||||.||+|+++|+++...+.... ..+ .....+++++..|++|..++ ..++.++..|+++++.+ .+++..+
T Consensus 150 il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~ 228 (705)
T PRK06060 150 ATYTSGTTGPPKAAIHRHADPLTFVDAMCRKAL-RLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPVTPEAA 228 (705)
T ss_pred EEECCCCCCCCcEEEEccccHHHHHHHHHHHhh-CCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCCCHHHH
Confidence 99999999999999999999988765543 233 56788999999999998887 56778899999999886 5788999
Q ss_pred HHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCcccccccccccc
Q 012774 274 LKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTV 353 (456)
Q Consensus 274 ~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~ 353 (456)
+..++++++|+++++|+++..+++... ...++++|.+++||+++++++.+++.+.+++.++++.||+||++..+....
T Consensus 229 ~~~i~~~~~t~~~~~P~~l~~l~~~~~--~~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~ 306 (705)
T PRK06060 229 AILSARFGPSVLYGVPNFFARVIDSCS--PDSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEVGQTFVSNR 306 (705)
T ss_pred HHHHHhcCCeEEeeHHHHHHHHHHhcc--cccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccccCceEEecc
Confidence 999999999999999999999987543 235789999999999999999999999997899999999999986544321
Q ss_pred CCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCc
Q 012774 354 GPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGF 433 (456)
Q Consensus 354 ~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~ 433 (456)
......+++|+|+++++++|+| +++++++.|+.|||+|+|+.++.||+++++.+. ..+|||+|||+|++++||+
T Consensus 307 --~~~~~~~~iG~p~~~~~v~i~d-~~g~~~~~g~~GEl~i~g~~v~~GY~~~~~~~~---~~~~~~~TGDl~~~~~dG~ 380 (705)
T PRK06060 307 --VDEWRLGTLGRVLPPYEIRVVA-PDGTTAGPGVEGDLWVRGPAIAKGYWNRPDSPV---ANEGWLDTRDRVCIDSDGW 380 (705)
T ss_pred --CCCCCcCcccccCCCcEEEEEC-CCCCCCCCCCceEEEEccchhhhhhhCCCcccc---cCCCcEECCeeEEECCCce
Confidence 1223457899999999999999 678899999999999999999999999988653 3579999999999999999
Q ss_pred EEEecccccceeeCCeeecCCCC
Q 012774 434 LFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 434 l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+++.||.||+||++|++|+|.||
T Consensus 381 l~~~GR~dd~ik~~G~~v~~~eI 403 (705)
T PRK06060 381 VTYRCRADDTEVIGGVNVDPREV 403 (705)
T ss_pred EEEecccCceEEECCEEECHHHH
Confidence 99999999999999999999874
No 38
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-59 Score=474.36 Aligned_cols=410 Identities=22% Similarity=0.287 Sum_probs=330.5
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
.|+.+.+.+.++++ |+++|+++.+.++.+||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||++
T Consensus 14 ~~~~~~l~~~a~~~----p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~e~~~~~lA~~~ 88 (540)
T PRK05857 14 STVLDRVFEQARQQ----PEAIALRRCDGTSALRYRELVAEVGGLAADLRA-QSVSRGSRVLVISDNGPETYLSVLACAK 88 (540)
T ss_pred cchHHHHHHHHhhC----CCcEEEeecCCCceeeHHHHHHHHHHHHHHHHH-hCcCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 58999999999999 999999875446789999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-----CCeEEEEcCCchhhh-hcccCCCccccccCCCC
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHRTILIDSPEFDSM-TMSWNSKHELDRAKVCQ 191 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 191 (456)
+|++++|+++..+.+++.++++.++++++|+++........+ ....+.++....... .................
T Consensus 89 ~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (540)
T PRK05857 89 LGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALHSIPVIAVDIAAVTRESEHSLDAASLAGNADQGS 168 (540)
T ss_pred cCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccccccceeEeecccccccccccccccccccccCCCC
Confidence 999999999999999999999999999999987653221111 122333322111000 00000000111233466
Q ss_pred CCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhcc---CCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEecCC
Q 012774 192 SDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFA---SSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRF 268 (456)
Q Consensus 192 ~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~ 268 (456)
+++++++|||||||.||+|.++|+++.++...... .......++++++.+|++|..++...+.++..|+++++ ...
T Consensus 169 ~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~~~~~~l~~G~~~v~-~~~ 247 (540)
T PRK05857 169 EDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLWWILTCLMHGGLCVT-GGE 247 (540)
T ss_pred CCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHHHHHHHhhcceeEEe-cCC
Confidence 89999999999999999999999999776543221 11134567899999999999999878889999998765 456
Q ss_pred CHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccc
Q 012774 269 DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAG 348 (456)
Q Consensus 269 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~ 348 (456)
++..+++.|+++++|+++++|+++..|.+.......+++++|.+++||++++....+ +.+.+ ++++++.||+||++..
T Consensus 248 ~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~-~~~~~-g~~i~~~YG~TE~~~~ 325 (540)
T PRK05857 248 NTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADVR-FIEAT-GVRTAQVYGLSETGCT 325 (540)
T ss_pred ChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCccCCchhHH-HHHHh-CCeeecccCCCcCCce
Confidence 889999999999999999999999999887665666789999999999999887765 45555 8999999999999864
Q ss_pred cccccCCCC---CCCCCccccccCCcEEEEEcCCCCCCC-----CCCCcceEEEecCCcccccCCCccccccccCCCCee
Q 012774 349 VFRTVGPDE---CRRWGSTGRLSAGLEAKIVDPETGDSL-----PPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWM 420 (456)
Q Consensus 349 ~~~~~~~~~---~~~~~~~G~~~~~~~~~i~d~~~~~~~-----~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~ 420 (456)
......... ..+.+++|+|++|++++|+|++....+ +.|+.|||+++|+.++.||+++++.+.+.| .+|||
T Consensus 326 ~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~-~~g~~ 404 (540)
T PRK05857 326 ALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVL-IDGWV 404 (540)
T ss_pred eeecccccccccccccCCcCcccCCcEEEEECccccCccccccCCCCCcceEEEeCcchhhhhhCCccchhhhc-CCCce
Confidence 433221111 124578999999999999995433333 357899999999999999999999999888 58999
Q ss_pred eccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 421 RTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 421 ~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+|||+|++|+||++++.||.||+||++|++|+|.|+
T Consensus 405 ~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eI 440 (540)
T PRK05857 405 NTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEV 440 (540)
T ss_pred eccceEEEcCCceEEEeccccccEecCCEEECHHHH
Confidence 999999999999999999999999999999999874
No 39
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=2.3e-59 Score=480.61 Aligned_cols=409 Identities=23% Similarity=0.276 Sum_probs=324.8
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECC---C--C--ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSV---T--G--LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~---~--~--~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~ 110 (456)
.|+++++.+.++++ |+++|+.... . + ..+||+|+.++++++|+.|.+ .|+++||+|+|+++|+++|++
T Consensus 42 ~t~~~~~~~~~~~~----p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~ew~~ 116 (660)
T PLN02430 42 TTAWDIFSKSVEKY----PDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRA-SGAEPGSRVGIYGSNCPQWIV 116 (660)
T ss_pred CCHHHHHHHHHHhC----CCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHH
Confidence 58999999999999 9999986421 1 1 357999999999999999999 899999999999999999999
Q ss_pred HHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHH-HHhc----c-CCe-EEEEcCC--------------
Q 012774 111 LYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVH-KLAK----L-KHR-TILIDSP-------------- 169 (456)
Q Consensus 111 ~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-~~~~----~-~~~-~~~~~~~-------------- 169 (456)
+++||+++|++++|+++.++++++.+++++++++++|+++.... .+.. . ..+ ++.++..
T Consensus 117 ~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~ 196 (660)
T PLN02430 117 AMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAIVSFTSVTEEESDKASQIGVK 196 (660)
T ss_pred HHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEEEEECCCChHHhhhhhcCCcE
Confidence 99999999999999999999999999999999999999865332 2221 1 122 3333321
Q ss_pred --chhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccC---C-CCCCCCcEEEEecch
Q 012774 170 --EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFAS---S-PKRVSPAVMLFTMPY 243 (456)
Q Consensus 170 --~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~---~-~~~~~~~~~~~~~p~ 243 (456)
.++++....... ........++++++++|||||||.||||++||+++...+...... + .....+|++++++|+
T Consensus 197 ~~~~~~~~~~~~~~-~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl 275 (660)
T PLN02430 197 TYSWIDFLHMGKEN-PSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPL 275 (660)
T ss_pred EEEHHHHHHhhccC-CCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeCcH
Confidence 122222211100 111123457899999999999999999999999998877654321 1 135678999999999
Q ss_pred hhHhhHHHHHHHhHhcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCC-----------------------
Q 012774 244 FHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS----------------------- 300 (456)
Q Consensus 244 ~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~----------------------- 300 (456)
+|.++....+.++..|+++.+... ++..+++.|++.++|++.++|.+++.+.+...
T Consensus 276 ~H~~~~~~~~~~l~~G~~i~~~~~-~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 354 (660)
T PLN02430 276 AHILDRMIEEYFFRKGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYKLA 354 (660)
T ss_pred HHHHHHHHHHHHHHcCCEEEEeCC-ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 999998666667889999887654 78899999999999999999999987764210
Q ss_pred --------CCCC---C----------C-CCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccCCCCC
Q 012774 301 --------TDGY---D----------L-SSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDEC 358 (456)
Q Consensus 301 --------~~~~---~----------l-~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~ 358 (456)
.... + + +++|.+++||+++++++.+.++ .+.+..+++.||+||+++.++... ....
T Consensus 355 ~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~-~~~~~~i~~~YG~TE~~~~~~~~~-~~~~ 432 (660)
T PLN02430 355 WMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLR-VTSCAFVVQGYGLTETLGPTTLGF-PDEM 432 (660)
T ss_pred HHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHH-HhcCCCeeeecchhhhhhceEeec-cccC
Confidence 0000 0 1 5899999999999999866555 443578999999999987665432 2223
Q ss_pred CCCCccccccCCcEEEEEcC-CCC-CCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEE
Q 012774 359 RRWGSTGRLSAGLEAKIVDP-ETG-DSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFI 436 (456)
Q Consensus 359 ~~~~~~G~~~~~~~~~i~d~-~~~-~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~ 436 (456)
...+++|+|.++++++|+|. +.+ .+++.+..|||+|+|++++.||+++++.|.+.| .+|||+|||+|++|+||+|+|
T Consensus 433 ~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~-~dGw~~TGDig~~d~dG~l~i 511 (660)
T PLN02430 433 CMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVM-KDGWFHTGDIGEILPNGVLKI 511 (660)
T ss_pred CCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCccccccCChHHhhhhh-hccceeccceEEECCCCcEEE
Confidence 34689999999999999873 333 455666789999999999999999999999998 699999999999999999999
Q ss_pred ecccccceee-CCeeecCCCC
Q 012774 437 VDRLKDLIKY-KGYQVLPLLN 456 (456)
Q Consensus 437 ~GR~~d~ik~-~G~~v~p~e~ 456 (456)
.||+||+||+ +|++|+|.||
T Consensus 512 ~gR~kd~ik~~~G~~V~p~~I 532 (660)
T PLN02430 512 IDRKKNLIKLSQGEYVALEYL 532 (660)
T ss_pred EEcccccEEcCCCcEEchHHH
Confidence 9999999997 5999999764
No 40
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=5e-59 Score=476.83 Aligned_cols=402 Identities=23% Similarity=0.286 Sum_probs=322.9
Q ss_pred CCCHHHHhhhcccCCCCCCCCCcEEEECC---CCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHH
Q 012774 37 PISAVDYVSSLRATLPWRDDDTVALINSV---TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYF 113 (456)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~A~~~~~---~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~l 113 (456)
..++.++|.+.++++ |+++|+++.+ ..+++||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++
T Consensus 38 ~~~l~~~l~~~a~~~----p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-~Gv~~gd~Vai~~~n~~e~~~~~l 112 (614)
T PRK08180 38 PRRLTDRLVHWAQEA----PDRVFLAERGADGGWRRLTYAEALERVRAIAQALLD-RGLSAERPLMILSGNSIEHALLAL 112 (614)
T ss_pred CccHHHHHHHHHHHC----CCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEecCCCHHHHHHHH
Confidence 369999999999999 9999998742 13689999999999999999998 899999999999999999999999
Q ss_pred HHHHhCCeEecCCCCCC-----HHHHHHHhhhcCCeEEEEccc--hHHHHhc---cCCeEEEEcC-------Cchhhhhc
Q 012774 114 SLLSLGVIISPANPVNT-----ESEISRQIQLSNPVIAFATSS--VVHKLAK---LKHRTILIDS-------PEFDSMTM 176 (456)
Q Consensus 114 a~~~~G~~~v~l~~~~~-----~~~l~~~l~~~~~~~vi~~~~--~~~~~~~---~~~~~~~~~~-------~~~~~~~~ 176 (456)
||+++|++++|+++.++ .+++.+++++++++++|+++. ....+.. ....++..+. ..+.++..
T Consensus 113 A~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 192 (614)
T PRK08180 113 AAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVPADVEVVAVRGAVPGRAATPFAALLA 192 (614)
T ss_pred HHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhccCCceEEEecCCCCCcccccHHHHhc
Confidence 99999999999999988 799999999999999999854 2222221 1223333321 22333332
Q ss_pred ccCCC-ccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCC-CCCCcEEEEecchhhHhhH-HHHH
Q 012774 177 SWNSK-HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK-RVSPAVMLFTMPYFHIYGL-FFCF 253 (456)
Q Consensus 177 ~~~~~-~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~-~~~~ 253 (456)
..... .........++++++++|||||||.||+|++||+++..+.......+.. ....+++++++|++|.+++ ..++
T Consensus 193 ~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~~ 272 (614)
T PRK08180 193 TPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPWNHTFGGNHNLG 272 (614)
T ss_pred cccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecchHHHhhHHHHHH
Confidence 21100 0111123457899999999999999999999999998887766555521 1256899999999999987 5667
Q ss_pred HHhHhcceEEEec-CCCH---HHHHHHHHHhcceeEEecHHHHHHHhcCCCC----CCCCCCCceEEEecCCCCCHHHHH
Q 012774 254 RAAALMETAVVMQ-RFDL---KMMLKAVEEFRVTHAAVTPPIVVAMSKGGST----DGYDLSSLETVACGAAPLGKDTIM 325 (456)
Q Consensus 254 ~~l~~G~~~~~~~-~~~~---~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~----~~~~l~~lr~v~~gG~~~~~~~~~ 325 (456)
.++..|+++++.+ .+++ ..+++.++++++|+++++|+++..|++.... ....++++|.+++||+++++++.+
T Consensus 273 ~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~gGa~l~~~~~~ 352 (614)
T PRK08180 273 IVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRLKLLFYAGAALSQDVWD 352 (614)
T ss_pred HHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccceeEEEEccCCCCHHHHH
Confidence 8899999998876 3443 5678889999999999999999988764322 223578999999999999999999
Q ss_pred HHHHh----C-CCCceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcc
Q 012774 326 AFASK----F-PKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIM 400 (456)
Q Consensus 326 ~~~~~----~-~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~ 400 (456)
.+++. + .+.++++.||+||++.+++.... .....+++|+|++|++++|+|+ +..|||+++|++++
T Consensus 353 ~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~--~~~~~~svG~p~pg~~v~i~d~--------~~~GEi~vrg~~v~ 422 (614)
T PRK08180 353 RLDRVAEATCGERIRMMTGLGMTETAPSATFTTG--PLSRAGNIGLPAPGCEVKLVPV--------GGKLEVRVKGPNVT 422 (614)
T ss_pred HHHHHHHhhcCCCceeeeeecccccCCceEeccc--ccCCCCcccCccCCcEEEEecC--------CCCcEEEEecCccc
Confidence 99875 2 24789999999999876554222 2345689999999999999983 34599999999999
Q ss_pred cccCCCccccccccCCCCeeeccceEEE----ccCCcEEEecccccceee-CCeeecC
Q 012774 401 KGYVGEPEVTSATLLPDGWMRTGDLCYI----DEDGFLFIVDRLKDLIKY-KGYQVLP 453 (456)
Q Consensus 401 ~gy~~~~~~~~~~~~~~g~~~TGDl~~~----~~dg~l~~~GR~~d~ik~-~G~~v~p 453 (456)
.||+++|+.+.+.|+.+|||+|||+|++ |+||+++|.||+||+||+ +|++|+|
T Consensus 423 ~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~ 480 (614)
T PRK08180 423 PGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSV 480 (614)
T ss_pred hhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecc
Confidence 9999999999999978999999999999 468999999999998885 6988774
No 41
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.1e-59 Score=469.64 Aligned_cols=407 Identities=28% Similarity=0.425 Sum_probs=351.8
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
.++.+.|.+.+..+ |+++|+++. ++++||+||.+++.++|+.|.+ .|+++||+|+++++|+++++++++||++
T Consensus 5 ~~i~~~l~~~~~~~----~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~gv~~g~~V~l~~~~~~~~~~~~la~~~ 77 (513)
T PRK07656 5 MTLPELLARAARRF----GDKEAYVFG--DQRLTYAELNARVRRAAAALAA-LGIGKGDRVAIWAPNSPHWVIAALGALK 77 (513)
T ss_pred ccHHHHHHHHHHHC----CCCeEEEeC--CCceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHh
Confidence 68999999999999 999999997 8899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-----CCe-EEEEcCC----------chhhhhcccCCC
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHR-TILIDSP----------EFDSMTMSWNSK 181 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-----~~~-~~~~~~~----------~~~~~~~~~~~~ 181 (456)
+|++++|+++..+.+.+.++++.++++++++++......... ... ++..... .|.++......
T Consensus 78 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 156 (513)
T PRK07656 78 AGAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDDPHTEKMKTFTDFLAAGDP- 156 (513)
T ss_pred cCeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCcccccCccccccHHHHHhcCCC-
Confidence 999999999999999999999999999999988766544321 111 2222211 22333222111
Q ss_pred ccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhH-HHHHHHhHhcc
Q 012774 182 HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALME 260 (456)
Q Consensus 182 ~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~ 260 (456)
.........+++++++|||||||.||+|.++|.++...+......+ ....++++++.+|++|.+++ ..++.++..|+
T Consensus 157 -~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~ 234 (513)
T PRK07656 157 -AERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYL-GLTEGDRYLAANPFFHVFGYKAGVNAPLMRGA 234 (513)
T ss_pred -CCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhh-CCCCCCeEEEccchHHHHHHHHHHHHHHHcCc
Confidence 1122345678899999999999999999999999988887766666 67889999999999999998 55788999999
Q ss_pred eEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCC-ceEec
Q 012774 261 TAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKV-VLVQA 339 (456)
Q Consensus 261 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~-~i~~~ 339 (456)
++++.+.++++.+++.|+++++|++.++|+++..+.+........++++|.+++||+++++++++.+++.+ +. .+++.
T Consensus 235 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~-~~~~~~~~ 313 (513)
T PRK07656 235 TILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESEL-GVDIVLTG 313 (513)
T ss_pred eEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHHc-CCCceEeE
Confidence 99998888999999999999999999999999999998776666789999999999999999999999998 55 89999
Q ss_pred cCccccccccccccCCCC-CCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCC
Q 012774 340 YGLTESTAGVFRTVGPDE-CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDG 418 (456)
Q Consensus 340 yG~tE~~~~~~~~~~~~~-~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g 418 (456)
||+||+++++..+..... ....+++|.|+++++++|+| +++.+++.|+.|||+++|+.++.||++++..+...+..+|
T Consensus 314 YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~ 392 (513)
T PRK07656 314 YGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVN-ELGEEVPVGEVGELLVRGPNVMKGYYDDPEATAAAIDADG 392 (513)
T ss_pred EccccCCCceeecCccccccccCCCccccCCCcEEEEEC-CCCCCCCCCCceEEEEEcchhhhhhcCCHHHHhhhhccCC
Confidence 999999877665432211 12257899999999999999 6789999999999999999999999999999988886689
Q ss_pred eeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 419 WMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 419 ~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
||+|||+|+++++|.+++.||.||+||++|++|+|.|+
T Consensus 393 ~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~i 430 (513)
T PRK07656 393 WLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEV 430 (513)
T ss_pred ceeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHH
Confidence 99999999999999999999999999999999999764
No 42
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.8e-59 Score=472.78 Aligned_cols=408 Identities=24% Similarity=0.362 Sum_probs=339.6
Q ss_pred CCCHHH-Hhhhccc-CCCCCCCCCcEEEECC--CCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHH
Q 012774 37 PISAVD-YVSSLRA-TLPWRDDDTVALINSV--TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILY 112 (456)
Q Consensus 37 ~~~~~~-~l~~~~~-~~~~~~p~~~A~~~~~--~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~ 112 (456)
.+|+.. .+.+.++ .+ |+++|+++.+ ..+++||+||.++++++|..|.+ .|+++||+|+++++|++++++++
T Consensus 41 ~~~~~~~~~~~~~~~~~----~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-~gv~~gd~V~i~~~n~~~~~~~~ 115 (570)
T PRK04319 41 KVNIAYEAIDRHADGGR----KDKVALRYLDASRKEKYTYKELKELSNKFANVLKE-LGVEKGDRVFIFMPRIPELYFAL 115 (570)
T ss_pred ceeHHHHHHHHhhccCC----CCceEEEEECCCCceeecHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHH
Confidence 356664 5555555 35 8999998742 34789999999999999999998 99999999999999999999999
Q ss_pred HHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhc--c-CC-eEEEEcCC--------chhhhhcccCC
Q 012774 113 FSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK--L-KH-RTILIDSP--------EFDSMTMSWNS 180 (456)
Q Consensus 113 la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~--~-~~-~~~~~~~~--------~~~~~~~~~~~ 180 (456)
+||+++|++++|+++.++++++.++++.++++++++++........ . .. .++.++.. ++.++......
T Consensus 116 la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (570)
T PRK04319 116 LGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPADDLPSLKHVLLVGEDVEEGPGTLDFNALMEQASD 195 (570)
T ss_pred HHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccchhcCCCceEEEEECCCcCCCcCccCHHHHHhhcCC
Confidence 9999999999999999999999999999999999998776544321 1 11 23333321 22222221111
Q ss_pred CccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhH-HHHHHHhHhc
Q 012774 181 KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALM 259 (456)
Q Consensus 181 ~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G 259 (456)
........++++++++|||||||.||+|+++|+++..+.......+ ....+|++++..|++|..+. ..++.++..|
T Consensus 196 --~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G 272 (570)
T PRK04319 196 --EFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVL-DLHEDDVYWCTADPGWVTGTSYGIFAPWLNG 272 (570)
T ss_pred --cCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhc-CCCCCceEEecCChHHhhCchHHHHHHHhcC
Confidence 1122234568899999999999999999999999988877766666 67788999999999998887 6688999999
Q ss_pred ceEEEec-CCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCC--CCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCce
Q 012774 260 ETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVL 336 (456)
Q Consensus 260 ~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i 336 (456)
+++++.. .+++..+++.|+++++|+++++|++++.|.+... ....+++++|.+++||+++++++.+++++.+ +.++
T Consensus 273 ~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~i 351 (570)
T PRK04319 273 ATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEPLNPEVVRWGMKVF-GLPI 351 (570)
T ss_pred ceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccCCCHHHHHHHHHHh-CCCe
Confidence 9988875 6899999999999999999999999999987543 2345688999999999999999999999988 7899
Q ss_pred EeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEec--CCcccccCCCcccccccc
Q 012774 337 VQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRG--PTIMKGYVGEPEVTSATL 414 (456)
Q Consensus 337 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g--~~~~~gy~~~~~~~~~~~ 414 (456)
++.||+||++..+.... .......+++|+|+|+++++|+| +++..+++|+.|||+++| +.++.||+++++.+.+.|
T Consensus 352 ~~~YG~tE~~~~~~~~~-~~~~~~~~~~G~p~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~ 429 (570)
T PRK04319 352 HDNWWMTETGGIMIANY-PAMDIKPGSMGKPLPGIEAAIVD-DQGNELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESYF 429 (570)
T ss_pred EeceeecccCCEEEecC-CCCCCCCCcCcCCCCCCEEEEEC-CCCCCCCCCCceEEEEcCCCChHHhHhcCCHHHhhhhh
Confidence 99999999987654322 22234568899999999999999 678888999999999997 889999999999999888
Q ss_pred CCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 415 LPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 415 ~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
. +|||+|||+|++++||++++.||.||+||++|++|+|.|+
T Consensus 430 ~-~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eI 470 (570)
T PRK04319 430 A-GDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFEV 470 (570)
T ss_pred c-CCceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHHH
Confidence 4 8999999999999999999999999999999999999874
No 43
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.1e-58 Score=468.69 Aligned_cols=409 Identities=26% Similarity=0.393 Sum_probs=349.0
Q ss_pred CCCCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHH
Q 012774 36 APISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (456)
Q Consensus 36 ~~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~ 115 (456)
..+|+.+.+...+..+ |+++|+++. ++.+||.||.++++++|..|.+ .|+++|++|+++++|+++++++++||
T Consensus 15 ~~~n~~~~~~~~a~~~----~~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~~a~ 87 (542)
T PRK07786 15 RRQNWVNQLARHALMQ----PDAPALRFL--GNTTTWRELDDRVAALAGALSR-RGVGFGDRVLILMLNRTEFVESVLAA 87 (542)
T ss_pred cccCHHHHHHHHHHHC----CCCeEEEeC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 3479999999999999 999999987 7899999999999999999998 89999999999999999999999999
Q ss_pred HHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-----CC-eEEEEcC------CchhhhhcccCCCcc
Q 012774 116 LSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KH-RTILIDS------PEFDSMTMSWNSKHE 183 (456)
Q Consensus 116 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-----~~-~~~~~~~------~~~~~~~~~~~~~~~ 183 (456)
+++|++++|+++..+.+++.++++.++++++++++.....+... .. .++..+. ..+.++...... .
T Consensus 88 ~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 165 (542)
T PRK07786 88 NMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGGSSDDSVLGYEDLLAEAGP--A 165 (542)
T ss_pred HHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecCCCcccccCHHHHhhccCC--C
Confidence 99999999999999999999999999999999998766554321 11 1222221 223333222111 1
Q ss_pred ccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEE
Q 012774 184 LDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAV 263 (456)
Q Consensus 184 ~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~ 263 (456)
........+++++++|||||||.||+|.++|+++...+......+.....++++++..|++|.+|+..++.++..|++++
T Consensus 166 ~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~v 245 (542)
T PRK07786 166 HAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGIGSMLPGLLLGAPTV 245 (542)
T ss_pred CCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHHHHHHHHHHccCEEE
Confidence 12223455789999999999999999999999998888776666522267899999999999999988899999999999
Q ss_pred Eec--CCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccC
Q 012774 264 VMQ--RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYG 341 (456)
Q Consensus 264 ~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG 341 (456)
+.+ .+++..+++.|+++++|+++++|+++..++......... .++|.+++||+++++++++.+++.+++.++++.||
T Consensus 246 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~-~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~YG 324 (542)
T PRK07786 246 IYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRD-LALRVLSWGAAPASDTLLRQMAATFPEAQILAAFG 324 (542)
T ss_pred EccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccC-cceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeec
Confidence 865 579999999999999999999999999998875443333 36999999999999999999999999999999999
Q ss_pred ccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeee
Q 012774 342 LTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMR 421 (456)
Q Consensus 342 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~ 421 (456)
+||++.+.+...........+++|+|++++.++|+| ++++.++.|+.|||+++|+.++.||+++++.+...| .+|||+
T Consensus 325 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f-~~~~~~ 402 (542)
T PRK07786 325 QTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVD-ENMNDVPVGEVGEIVYRAPTLMSGYWNNPEATAEAF-AGGWFH 402 (542)
T ss_pred ccccccceEecCcccccccCCCccccCCCceEEEEC-CCCCCCcCCCceEEEEEChhhhhhhcCCHHHHHHHh-hCCccc
Confidence 999987665433333334567899999999999999 678899999999999999999999999999999888 589999
Q ss_pred ccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 422 TGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 422 TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
|||++++++||++++.||.||+||++|++|+|.|+
T Consensus 403 TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~ei 437 (542)
T PRK07786 403 SGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEV 437 (542)
T ss_pred ccceEEEcCCceEEEEecccceEEeCCEEECHHHH
Confidence 99999999999999999999999999999999874
No 44
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.1e-58 Score=471.15 Aligned_cols=413 Identities=30% Similarity=0.407 Sum_probs=347.7
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
.|+.+.|.+.++++ |+++|+++...++++||+||.++++++|..|.+ .|+++||+|+++++|+++++++++||++
T Consensus 16 ~~l~~~l~~~~~~~----~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~-~gi~~g~~V~i~~~~~~~~~~~~la~~~ 90 (559)
T PRK08315 16 QTIGQLLDRTAARY----PDREALVYRDQGLRWTYREFNEEVDALAKGLLA-LGIEKGDRVGIWAPNVPEWVLTQFATAK 90 (559)
T ss_pred ccHHHHHHHHHHHC----CCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHH
Confidence 68999999999999 999999986557899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHH-----HHh----cc---------------CCeEEEEcC-----
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVH-----KLA----KL---------------KHRTILIDS----- 168 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-----~~~----~~---------------~~~~~~~~~----- 168 (456)
+|++++|+++..+.+++.++++.++++++++++.... .+. ++ ...++..+.
T Consensus 91 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (559)
T PRK08315 91 IGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDEKHPG 170 (559)
T ss_pred hCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecccCCcc
Confidence 9999999999999999999999999999999865321 111 00 011222221
Q ss_pred -CchhhhhcccC----CCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecch
Q 012774 169 -PEFDSMTMSWN----SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPY 243 (456)
Q Consensus 169 -~~~~~~~~~~~----~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~ 243 (456)
..+.++..... ............+++++++|||||||.||+|.++|+++..++......+ ....+++++..+|+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~~~~~p~ 249 (559)
T PRK08315 171 MLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAM-KLTEEDRLCIPVPL 249 (559)
T ss_pred cccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhc-CCCCCceEEEecCc
Confidence 12333222110 0001112234568899999999999999999999999988887777666 67889999999999
Q ss_pred hhHhhH-HHHHHHhHhcceEEEe-cCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCH
Q 012774 244 FHIYGL-FFCFRAAALMETAVVM-QRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGK 321 (456)
Q Consensus 244 ~~~~g~-~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~ 321 (456)
+|.+++ ..++.++..|+++++. ..+++..+++.++++++|+++++|+++..++.........++++|.+++||++++.
T Consensus 250 ~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~lr~~~~~G~~~~~ 329 (559)
T PRK08315 250 YHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLSSLRTGIMAGSPCPI 329 (559)
T ss_pred HHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCchhhheeEecCCCCCH
Confidence 999988 5678889999998854 56899999999999999999999999998888766566678999999999999999
Q ss_pred HHHHHHHHhCCCCceEeccCccccccccccccCCC-CCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcc
Q 012774 322 DTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPD-ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIM 400 (456)
Q Consensus 322 ~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~ 400 (456)
++++.+.+.++..++++.||+||++.+++...... ...+..++|+|++++.++|+|+++++.++.|+.|||+|+|+.++
T Consensus 330 ~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~ 409 (559)
T PRK08315 330 EVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPETGETVPRGEQGELCTRGYSVM 409 (559)
T ss_pred HHHHHHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEcCccCCcCCCCCceEEEEECchhh
Confidence 99999999986667999999999987655432221 22346789999999999999977799999999999999999999
Q ss_pred cccCCCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 401 KGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 401 ~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
.||++++..+...+..++||+|||+|++++||+++++||.||+||++|++|+|.|+
T Consensus 410 ~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~eI 465 (559)
T PRK08315 410 KGYWNDPEKTAEAIDADGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPREI 465 (559)
T ss_pred hhhcCChhHHhhcCCCCCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHHH
Confidence 99999999998888778999999999999999999999999999999999999774
No 45
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=1.4e-58 Score=466.49 Aligned_cols=407 Identities=25% Similarity=0.330 Sum_probs=344.0
Q ss_pred CCCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHH
Q 012774 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (456)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~ 116 (456)
..++.+++.+.++.+ |+++|+++. ++++||+||.++++++|..|.+ .|+++|++|+++++|+++++++++||+
T Consensus 22 ~~~l~~~~~~~a~~~----p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~la~~ 94 (527)
T TIGR02275 22 DKPLTDILRDQAARY----PDAIAIICG--NRQWSYRELDQRADNLAAGLTK-LGIGQGDTAVVQLPNIAEFYIVFFALL 94 (527)
T ss_pred CCcHHHHHHHHHHHC----CCceEEEeC--CceecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCcHHHHHHHHHHH
Confidence 468999999999988 999999987 7899999999999999999998 899999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchH--------HHHhc-c-CCeEEE-EcCC----chhhhhcccCCC
Q 012774 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV--------HKLAK-L-KHRTIL-IDSP----EFDSMTMSWNSK 181 (456)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~--------~~~~~-~-~~~~~~-~~~~----~~~~~~~~~~~~ 181 (456)
++|++++++++..+.+++.++++.++++++++++... ..+.. . ....+. .... ......... .
T Consensus 95 ~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 172 (527)
T TIGR02275 95 KLGIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRVEAELFLWLESP--A 172 (527)
T ss_pred HcCeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCCcchhhHHhhCc--C
Confidence 9999999999999999999999999999999986531 11111 1 112222 2111 011111110 0
Q ss_pred ccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHH--HHHHHhHhc
Q 012774 182 HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLF--FCFRAAALM 259 (456)
Q Consensus 182 ~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~--~~~~~l~~G 259 (456)
.........++++++++|||||||.||+|+++|+++..++....... ....++++++.+|++|.+++. .++.++..|
T Consensus 173 ~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G 251 (527)
T TIGR02275 173 EPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEIC-WLTQQTRYLCALPAAHNYPLSSPGALGVFYAG 251 (527)
T ss_pred ccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhc-CCCcCCEEEECCChHhhhhhhHHHHHHHHhcC
Confidence 01112345678999999999999999999999999988887766665 678899999999999999884 478889999
Q ss_pred ceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEec
Q 012774 260 ETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQA 339 (456)
Q Consensus 260 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~ 339 (456)
+++++.+.+++..+++.++++++|++.++|+++..+.+.......+++++|.+++||+++++++.+++.+.+ +.++++.
T Consensus 252 ~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~~ 330 (527)
T TIGR02275 252 GCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVPAVF-GCQLQQV 330 (527)
T ss_pred CeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHh-CCeEEee
Confidence 999998888999999999999999999999999999887766666788999999999999999999999988 8999999
Q ss_pred cCccccccccccccCCCCCCCCCcccccc-CCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCC
Q 012774 340 YGLTESTAGVFRTVGPDECRRWGSTGRLS-AGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDG 418 (456)
Q Consensus 340 yG~tE~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g 418 (456)
||+||++...... ........+++|+|+ ++..++|+| +++++++.|+.|||+++|+.++.||+++++.+.+.++.+|
T Consensus 331 YG~tE~~~~~~~~-~~~~~~~~~~~G~~~~~~~~v~i~d-~~g~~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg 408 (527)
T TIGR02275 331 FGMAEGLVNYTRL-DDPAEIIFTTQGRPMSPDDEVRVVD-DHGNPVAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDAEG 408 (527)
T ss_pred eccCccCccccCC-CCccccccccCCCCCCCCceEEEEC-CCCCCCCCCCceEEEecCCccchhhcCChhHhHhhcCcCC
Confidence 9999965443321 111223446899999 488999999 7789999999999999999999999999999999998899
Q ss_pred eeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 419 WMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 419 ~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
||+|||+|++++||++++.||.||+||++|++|+|.|+
T Consensus 409 ~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~ei 446 (527)
T TIGR02275 409 FYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEI 446 (527)
T ss_pred CEEcCceEEEcCCccEEEEecccceeecCCEEECHHHH
Confidence 99999999999999999999999999999999999874
No 46
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-58 Score=471.45 Aligned_cols=409 Identities=30% Similarity=0.480 Sum_probs=343.2
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
.++.+++.+.++++ |+++|+++. ++.+||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||++
T Consensus 32 ~~l~~~~~~~~~~~----p~~~a~~~~--~~~~Ty~ql~~~~~~~A~~L~~-~gi~~gd~V~l~~~n~~~~~~~~lA~~~ 104 (573)
T PRK05605 32 TTLVDLYDNAVARF----GDRPALDFF--GATTTYAELGKQVRRAAAGLRA-LGVRPGDRVAIVLPNCPQHIVAFYAVLR 104 (573)
T ss_pred CCHHHHHHHHHHHC----CCCeEEEeC--CCcccHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 69999999999999 999999987 7899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc----CCe-EEEEcC------------------------
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHR-TILIDS------------------------ 168 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~~~-~~~~~~------------------------ 168 (456)
+|++++|++|.++.+++.++++.++++++|+++.....+.+. ... ++.++.
T Consensus 105 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (573)
T PRK05605 105 LGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTTPLETIVSVNMIAAMPLLQRLALRLPIPALRKARA 184 (573)
T ss_pred cCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhccccceeEeeeccccccccccccccccccccccccc
Confidence 999999999999999999999999999999987765444321 111 111110
Q ss_pred ---------CchhhhhcccCCC--ccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCC-CCCCcE
Q 012774 169 ---------PEFDSMTMSWNSK--HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK-RVSPAV 236 (456)
Q Consensus 169 ---------~~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~-~~~~~~ 236 (456)
..|+++....... ..........+++++++|||||||.||+|.++|+++..++......... ...+++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~ 264 (573)
T PRK05605 185 ALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDGPER 264 (573)
T ss_pred ccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCCCcE
Confidence 0111111110000 0011123456899999999999999999999999998777654433311 235789
Q ss_pred EEEecchhhHhhH-HHHHHHhHhcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEec
Q 012774 237 MLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACG 315 (456)
Q Consensus 237 ~~~~~p~~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~g 315 (456)
+++.+|++|.+|+ ..++.++..|+++++.+.++++.+++.++++++|++.++|++++.|.+........++++|.+++|
T Consensus 265 ~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~g 344 (573)
T PRK05605 265 VLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRNAFSG 344 (573)
T ss_pred EEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccEEEEC
Confidence 9999999999988 456678899999999988999999999999999999999999999998776666778999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCC-CCCCCCCCcceEEE
Q 012774 316 AAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPET-GDSLPPGKEGELSI 394 (456)
Q Consensus 316 G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~-~~~~~~g~~Gel~i 394 (456)
|+++++++.+.+.+.+ +.++++.||+||+++++..... ......+++|+|++++.++|+|+++ +..++.|+.|||++
T Consensus 345 g~~l~~~~~~~~~~~~-~~~i~~~YG~TE~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~Gel~v 422 (573)
T PRK05605 345 AMALPVSTVELWEKLT-GGLLVEGYGLTETSPIIVGNPM-SDDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEEGELLV 422 (573)
T ss_pred CCcCCHHHHHHHHHHh-CCCeecccccchhchhhhcCCc-ccCCcCCccccCCCCCEEEEEcCCCCCccCCCCCeeEEEE
Confidence 9999999999999887 7899999999999877655322 2223457899999999999999666 68899999999999
Q ss_pred ecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 395 RGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 395 ~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+|+.++.||+++++.+.+.| .+|||+|||+|++|++|++++.||.||+||++|++|+|.||
T Consensus 423 ~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eI 483 (573)
T PRK05605 423 RGPQVFKGYWNRPEETAKSF-LDGWFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAEV 483 (573)
T ss_pred ecCchhhhhcCChhHhhhcc-cCCCcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHHH
Confidence 99999999999999999888 46799999999999999999999999999999999999774
No 47
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.2e-59 Score=477.40 Aligned_cols=415 Identities=20% Similarity=0.262 Sum_probs=330.4
Q ss_pred CCCCCHHH-HhhhcccCCCCCCCCCcEEEECC----CCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHH
Q 012774 35 DAPISAVD-YVSSLRATLPWRDDDTVALINSV----TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP 109 (456)
Q Consensus 35 ~~~~~~~~-~l~~~~~~~~~~~p~~~A~~~~~----~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~ 109 (456)
.+.+|+.. ++.+.++.+ |+++|+++.. ..+++||+||.++++++|+.|.+ +|+++||+|+++++|+++++
T Consensus 49 ~~~~n~~~~~l~~~~~~~----p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~~ 123 (629)
T PRK10524 49 GGRTNLCHNAVDRHLAKR----PEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRS-LGVQRGDRVLIYMPMIAEAA 123 (629)
T ss_pred CcEeeHHHHHHHHhhccC----CCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHH
Confidence 45577744 455666667 9999998631 24689999999999999999998 89999999999999999999
Q ss_pred HHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccch---------HHHH----hc---cCCeEEEEcCC----
Q 012774 110 ILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSV---------VHKL----AK---LKHRTILIDSP---- 169 (456)
Q Consensus 110 ~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~----~~---~~~~~~~~~~~---- 169 (456)
++++||+++|++++|+++.++.+++.+++++++++++|+++.. .+.+ .. ....+++++..
T Consensus 124 ~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~ 203 (629)
T PRK10524 124 FAMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPM 203 (629)
T ss_pred HHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc
Confidence 9999999999999999999999999999999999999997642 1111 11 12234444321
Q ss_pred --------chhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEec
Q 012774 170 --------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTM 241 (456)
Q Consensus 170 --------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~ 241 (456)
.+..+..... ...........+++++++|||||||.||+|+++|.++...............++|++++..
T Consensus 204 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 282 (629)
T PRK10524 204 ARVAGRDVDYATLRAQHL-GARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCAS 282 (629)
T ss_pred CcccCCcccHHHHHhcCC-CCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcC
Confidence 1222211100 0011112245688999999999999999999999987654443332222567889999999
Q ss_pred chhhHhhH-HHHHHHhHhcceEEEec----CCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCC--CCCCCCCCceEEEe
Q 012774 242 PYFHIYGL-FFCFRAAALMETAVVMQ----RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVAC 314 (456)
Q Consensus 242 p~~~~~g~-~~~~~~l~~G~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~v~~ 314 (456)
|+.|..+. ..++.++..|+++++.+ .+++..+++.|+++++|+++++|++++.|.+... ....+++++|.+++
T Consensus 283 ~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~ 362 (629)
T PRK10524 283 DIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFL 362 (629)
T ss_pred CCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEE
Confidence 99998876 56788999999999875 3578999999999999999999999999887542 23456889999999
Q ss_pred cCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccC--CCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceE
Q 012774 315 GAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG--PDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGEL 392 (456)
Q Consensus 315 gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~--~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel 392 (456)
||+++++++.+++.+.+ +.++++.||+||++..+..... .....+.+++|+|+++++++|+|++++++++.|+.|||
T Consensus 363 ~Ge~l~~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~~Gel 441 (629)
T PRK10524 363 AGEPLDEPTASWISEAL-GVPVIDNYWQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNEKGVL 441 (629)
T ss_pred eCCCCCHHHHHHHHHhc-CCCeEeccccccccchhhcCCCCcccCcCCCCCcccCcCCceEEEEeCCCCCCCCCCCcEEE
Confidence 99999999999999988 7899999999999854332211 11223467899999999999999558999999999999
Q ss_pred EEecC---CcccccCCCccccccccC---CCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 393 SIRGP---TIMKGYVGEPEVTSATLL---PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 393 ~i~g~---~~~~gy~~~~~~~~~~~~---~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+++|| +++.||+++++.+.+.+. .++||+|||+|++|+||+++|.||.||+||++|++|+|.||
T Consensus 442 ~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eI 511 (629)
T PRK10524 442 VIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREI 511 (629)
T ss_pred EEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHH
Confidence 99998 578899999876655432 46899999999999999999999999999999999999874
No 48
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.9e-59 Score=468.69 Aligned_cols=407 Identities=26% Similarity=0.384 Sum_probs=351.1
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
.++.+++...++++ |+++|+++. +..+||+||.+++.++|..|.+ .|+++||+|+++++|+++++++++||++
T Consensus 11 ~~l~~~l~~~a~~~----~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~gi~~~~~V~l~~~~~~~~~~~~~a~~~ 83 (523)
T PRK08316 11 QTIGDILRRSARRY----PDKTALVFG--DRSWTYAELDAAVNRVAAALLD-LGLKKGDRVAALGHNSDAYALLWLACAR 83 (523)
T ss_pred CCHHHHHHHHHHHC----CCCeEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 58999999999999 999999988 7899999999999999999999 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc----CCeEEEEc-----------CCchhhhhcccCCCc
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHRTILID-----------SPEFDSMTMSWNSKH 182 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~~~~~~~~-----------~~~~~~~~~~~~~~~ 182 (456)
+|++++|+++..+.+++.++++.++++++++++.....+.+. ....+... ...+..+..... .
T Consensus 84 ~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 161 (523)
T PRK08316 84 AGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPVDTLILSLVLGGREAPGGWLDFADWAEAGS--V 161 (523)
T ss_pred cCcEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCccceeeeecccccccccchhhHHHHHhcCC--C
Confidence 999999999999999999999999999999998776655421 11111110 011222211111 0
Q ss_pred cccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHH-HHHHHhHhcce
Q 012774 183 ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLF-FCFRAAALMET 261 (456)
Q Consensus 183 ~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~-~~~~~l~~G~~ 261 (456)
.........+++++++|||||||.||+|.++|+++..+.......+ ...+++++++.+|++|..++. .++.++..|++
T Consensus 162 ~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~ 240 (523)
T PRK08316 162 AEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAG-DMSADDIPLHALPLYHCAQLDVFLGPYLYVGAT 240 (523)
T ss_pred ccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHh-CCCCCceEEEccCCchhhhHHHHHHHHHhcCce
Confidence 1123345678899999999999999999999999988877766666 678899999999999999884 45567889999
Q ss_pred EEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccC
Q 012774 262 AVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYG 341 (456)
Q Consensus 262 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG 341 (456)
+++.+..++..+++.++++++|++.++|+++..+.+.......+++++|.+++||+.++.++.+.+++.+++.++++.||
T Consensus 241 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG 320 (523)
T PRK08316 241 NVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYG 320 (523)
T ss_pred EEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeec
Confidence 99998889999999999999999999999999999887666677899999999999999999999999998899999999
Q ss_pred ccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeee
Q 012774 342 LTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMR 421 (456)
Q Consensus 342 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~ 421 (456)
+||++.++......+.....+++|+|+++++++|+| +++..++.|+.|||+++|+.++.||+++++.+.+.| .++||+
T Consensus 321 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~-~~~~~~ 398 (523)
T PRK08316 321 QTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVD-DDGNDVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAF-RGGWFH 398 (523)
T ss_pred ccccCccccccCccccccccCCcccCCCCcEEEEEc-CCCCCCCCCCcceEEEECCchhhhhcCCHHHHHHHh-hCCCee
Confidence 999988766543333334567899999999999999 668999999999999999999999999999998888 689999
Q ss_pred ccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 422 TGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 422 TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
|||+|++++||++++.||.||+||++|++|+|.|+
T Consensus 399 TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~i 433 (523)
T PRK08316 399 SGDLGVMDEEGYITVVDRKKDMIKTGGENVASREV 433 (523)
T ss_pred ccceEEEcCCceEEEecccccEEEeCCeEECHHHH
Confidence 99999999999999999999999999999999764
No 49
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=2.9e-58 Score=464.85 Aligned_cols=404 Identities=26% Similarity=0.354 Sum_probs=345.3
Q ss_pred CCCCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHH
Q 012774 36 APISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (456)
Q Consensus 36 ~~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~ 115 (456)
...++.+++.+.++.+ |+++|+++. ++++||+||.++++++|..|.+ .|+++|++|+++++|+++++++++||
T Consensus 19 ~~~~l~~~l~~~a~~~----p~~~a~~~~--~~~~Ty~el~~~v~~la~~L~~-~gi~~g~~V~v~~~n~~~~~~~~lA~ 91 (542)
T PRK06155 19 SERTLPAMLARQAERY----PDRPLLVFG--GTRWTYAEAARAAAAAAHALAA-AGVKRGDRVALMCGNRIEFLDVFLGC 91 (542)
T ss_pred cccCHHHHHHHHHHHC----CCCeEEEeC--CccccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHH
Confidence 3478999999999999 999999987 7899999999999999999998 99999999999999999999999999
Q ss_pred HHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhccC------CeEEEEcCCc-------hhhhhcccCCCc
Q 012774 116 LSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK------HRTILIDSPE-------FDSMTMSWNSKH 182 (456)
Q Consensus 116 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~------~~~~~~~~~~-------~~~~~~~~~~~~ 182 (456)
+++|++++|+++.++.+++.++++.+++++++++++....+.... ..++.++... +...... ....
T Consensus 92 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 170 (542)
T PRK06155 92 AWLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPASVSVPAGWSTAPLP-PLDA 170 (542)
T ss_pred HHhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCccccccccccchhhhc-ccCC
Confidence 999999999999999999999999999999999987776654321 1233333211 0000000 0000
Q ss_pred cccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceE
Q 012774 183 ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETA 262 (456)
Q Consensus 183 ~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~ 262 (456)
........++++++++|||||||.||+|+++|+++..........+ .....+++++..|++|..++..++.++..|+++
T Consensus 171 ~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~-~~~~~~~~l~~~pl~~~~~~~~~~~~l~~G~~~ 249 (542)
T PRK06155 171 PAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDL-EIGADDVLYTTLPLFHTNALNAFFQALLAGATY 249 (542)
T ss_pred CCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhc-CCCCCCEEEEecCHHHHHHHHHHHHHHHcCceE
Confidence 1112234568899999999999999999999999987776666666 678899999999999999998789999999999
Q ss_pred EEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCc
Q 012774 263 VVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGL 342 (456)
Q Consensus 263 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~ 342 (456)
++.+.+++..+++.|+++++|+++++|+++..|.+.........+++|.++.|| +++++.+.+++.+ ++++++.||+
T Consensus 250 ~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~--~~~~~~~~~~~~~-~~~v~~~YG~ 326 (542)
T PRK06155 250 VLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPG--VPAALHAAFRERF-GVDLLDGYGS 326 (542)
T ss_pred EeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcC--CCHHHHHHHHHHc-CCCEEeeecc
Confidence 999999999999999999999999999999999887766556677899888665 5789999999988 8899999999
Q ss_pred cccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecC---CcccccCCCccccccccCCCCe
Q 012774 343 TESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGP---TIMKGYVGEPEVTSATLLPDGW 419 (456)
Q Consensus 343 tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~---~~~~gy~~~~~~~~~~~~~~g~ 419 (456)
||++.++.... .....+++|.+.++++++|+| ++++.++.|+.|||+++|+ .++.||+++++.+.+.| .++|
T Consensus 327 tE~~~~~~~~~---~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~-~~~~ 401 (542)
T PRK06155 327 TETNFVIAVTH---GSQRPGSMGRLAPGFEARVVD-EHDQELPDGEPGELLLRADEPFAFATGYFGMPEKTVEAW-RNLW 401 (542)
T ss_pred cccCccccCCC---CCCCCCCcCccCCCceEEEEC-CCCCCCCCCCceEEEEecCCccccchhhcCCHHHHHHhh-cCCc
Confidence 99987755421 234567899999999999999 6689999999999999998 68999999999988887 5899
Q ss_pred eeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 420 MRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 420 ~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
|+|||+|++++||++++.||.||+||++|++|+|.|+
T Consensus 402 ~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eI 438 (542)
T PRK06155 402 FHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFEV 438 (542)
T ss_pred EeccceEEEcCCceEEEEecCCCEEEeCCEEECHHHH
Confidence 9999999999999999999999999999999999764
No 50
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=2.8e-58 Score=465.49 Aligned_cols=409 Identities=25% Similarity=0.358 Sum_probs=341.7
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEEC----CCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINS----VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYF 113 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~----~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~l 113 (456)
.|+.+.+.+.+..+ |+++|++.. ..+..+||+||.++++++|..|.+ .|+++|++|+++++|+++++++++
T Consensus 22 ~~~~~~~~~~~~~~----p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~-~g~~~g~~V~i~~~~~~~~~~~~l 96 (538)
T TIGR03208 22 RTINDHFDAAVANC----PDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLAR-LGVGRGDVVSFQLPNRWEFTALYL 96 (538)
T ss_pred CcHHHHHHHHHHHC----CCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHH
Confidence 58999999999998 999999852 124689999999999999999998 899999999999999999999999
Q ss_pred HHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchH-----HHHh---c-c--CCeEEEEcCC---chhhhhcccC
Q 012774 114 SLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV-----HKLA---K-L--KHRTILIDSP---EFDSMTMSWN 179 (456)
Q Consensus 114 a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~---~-~--~~~~~~~~~~---~~~~~~~~~~ 179 (456)
||+++|++++|+++..+.+++.++++.++++++++++... .... . . ...++..+.. .++.+.....
T Consensus 97 a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (538)
T TIGR03208 97 ACARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGDGDDSFDRVLMTPE 176 (538)
T ss_pred HHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCCCCcCHHHHhhccc
Confidence 9999999999999999999999999999999999987542 1111 1 1 1123333321 2332221110
Q ss_pred CC--cc----ccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhH-HHH
Q 012774 180 SK--HE----LDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFC 252 (456)
Q Consensus 180 ~~--~~----~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~ 252 (456)
.. .. .......++++++++|||||||.||+|+++|+++...+......+ ....++++++.+|++|..++ ..+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~d~~l~~~pl~h~~g~~~~~ 255 (538)
T TIGR03208 177 RDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERL-ELGGGDVILMASPMAHQTGFMYGL 255 (538)
T ss_pred cccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhc-CCCCCCeEEEeCCchhHHHHHHHH
Confidence 00 00 011234668999999999999999999999999998888777766 57788999999999999887 567
Q ss_pred HHHhHhcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCC
Q 012774 253 FRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFP 332 (456)
Q Consensus 253 ~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~ 332 (456)
+.++..|+++++.+.+++..+++.++++++|++.++|+++..+..........++++|.+++||+++++++.+++.+.+
T Consensus 256 ~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~- 334 (538)
T TIGR03208 256 MMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAGAPIPGILVERAWELL- 334 (538)
T ss_pred HHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcCCCCCHHHHHHHHHHc-
Confidence 8899999999999889999999999999999999999999998876544456688999999999999999999999988
Q ss_pred CCceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCcccccc
Q 012774 333 KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSA 412 (456)
Q Consensus 333 ~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~ 412 (456)
++++++.||+||++.+..............++|+|+++++++|+| +++..++.|+.|||+++|+.++.||+++++.+.
T Consensus 335 ~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~- 412 (538)
T TIGR03208 335 GALIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVID-ANGAKLSQGETGRLLVRGCSNFGGYLKRPHLNS- 412 (538)
T ss_pred CCeEEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEEC-CCCCCCcCCCCcEEEEecCcccccccCCccccc-
Confidence 789999999999987665432221122245789999999999999 678889999999999999999999999988765
Q ss_pred ccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 413 TLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 413 ~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
.+.+|||+|||+|++|++|+++++||.||+||++|++|+|.||
T Consensus 413 -~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eI 455 (538)
T TIGR03208 413 -TDAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEI 455 (538)
T ss_pred -ccCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHH
Confidence 3468999999999999999999999999999999999999874
No 51
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2.6e-59 Score=552.03 Aligned_cols=402 Identities=20% Similarity=0.287 Sum_probs=351.6
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
.+++++|.++++++ |+++|+++. ++++||+||.++++++|+.|.+ .|+++|++|+|+++++++++++++||++
T Consensus 3095 ~~~~~l~~~~a~~~----p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~-~gv~~g~~V~l~~~~s~~~vv~~lavl~ 3167 (3956)
T PRK12467 3095 RLVHQLIEAQVART----PEAPALVFG--DQQLSYAELNRRANRLAHRLIA-IGVGPDVLVGVAVERSVEMIVALLAVLK 3167 (3956)
T ss_pred ccHHHHHHHHHHhC----CCcceEeeC--CcccCHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEeCCCHHHHHHHHHHHh
Confidence 58999999999999 999999998 7899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-CCeEEEEcCCchhhhhcccCCCccccccCCCCCCEEE
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 196 (456)
+|++++|++|.++.+++.++++++++++++++......+... ....+.++...... . ..........++++++
T Consensus 3168 aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~a~ 3241 (3956)
T PRK12467 3168 AGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAPAGDTALTLDRLDLNG-----Y-SENNPSTRVMGENLAY 3241 (3956)
T ss_pred hCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccccCCceeeecchhhcc-----c-CCCCCcccCCCCceEE
Confidence 999999999999999999999999999999998776655422 22333333221110 0 1112223456789999
Q ss_pred EEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEecC--CCHHHHH
Q 012774 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR--FDLKMML 274 (456)
Q Consensus 197 i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~ 274 (456)
++|||||||.||||+++|+++.+.+......+ ++..+|+++.++|+.|..+...++.++..|+++++.+. +++..++
T Consensus 3242 ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~l~ 3320 (3956)
T PRK12467 3242 VIYTSGSTGKPKGVGVRHGALANHLCWIAEAY-ELDANDRVLLFMSFSFDGAQERFLWTLICGGCLVVRDNDLWDPEELW 3320 (3956)
T ss_pred EEEccCCCCCcceeeehhHHHHHHHHHHHHhc-CCCcCCEEEEecCccHhHHHHHHHHHHhCCCEEEECCcccCCHHHHH
Confidence 99999999999999999999999998887777 78899999999999999988889999999999999875 7899999
Q ss_pred HHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccC
Q 012774 275 KAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG 354 (456)
Q Consensus 275 ~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~ 354 (456)
+.|+++++|++.++|+++..+.+... ..+++++|.+++|||++++++.++|.+.+++.++++.||+||++..++....
T Consensus 3321 ~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~ 3398 (3956)
T PRK12467 3321 QAIHAHRISIACFPPAYLQQFAEDAG--GADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVTLWKC 3398 (3956)
T ss_pred HHHHHcCCEEEEcCHHHHHHHHhccc--ccCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeEEEec
Confidence 99999999999999999999986532 3467889999999999999999999998888999999999999876654322
Q ss_pred CCC---CCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCC-------eeeccc
Q 012774 355 PDE---CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDG-------WMRTGD 424 (456)
Q Consensus 355 ~~~---~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g-------~~~TGD 424 (456)
... .....++|+|++|++++|+| +.+++++.|+.|||+|+|+.+++||+++|+.|.++|..++ ||+|||
T Consensus 3399 ~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGD 3477 (3956)
T PRK12467 3399 GGDAVCEAPYAPIGRPVAGRSIYVLD-GQLNPVPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGD 3477 (3956)
T ss_pred ccccccCCCCCCCccccCCCEEEEEC-CCCCCCCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccch
Confidence 111 12336899999999999999 7799999999999999999999999999999999997654 699999
Q ss_pred eEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 425 LCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 425 l~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+|++++||+|+|+||+|++||++|+||+|.||
T Consensus 3478 l~~~~~dG~l~~~GR~d~~iki~G~rIe~~EI 3509 (3956)
T PRK12467 3478 LARYRADGVIEYLGRIDHQVKIRGFRIELGEI 3509 (3956)
T ss_pred hheecCCCcEEEeccccceEeeceEeecHHHH
Confidence 99999999999999999999999999999875
No 52
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.7e-59 Score=476.30 Aligned_cols=410 Identities=23% Similarity=0.281 Sum_probs=323.6
Q ss_pred CCCCCCCCCHHHHhhhcccCCCCCCCCCcEEEECCC----CceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCC
Q 012774 31 LPPEDAPISAVDYVSSLRATLPWRDDDTVALINSVT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI 106 (456)
Q Consensus 31 ~~~~~~~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~----~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~ 106 (456)
+|+.....++.++|.+.++++ |+++|+++.+. .+++||+||.++++++|+.|.+ .|+++||+|+++++|++
T Consensus 42 ~~~~~~~~~l~~~l~~~a~~~----pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~ 116 (624)
T PRK12582 42 HPLGPYPRSIPHLLAKWAAEA----PDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLD-LGLDPGRPVMILSGNSI 116 (624)
T ss_pred CCCCCcccCHHHHHHHHHHHC----CCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEecCCCH
Confidence 344344579999999999999 99999987421 2689999999999999999998 89999999999999999
Q ss_pred cHHHHHHHHHHhCCeEecCCCCCCH-----HHHHHHhhhcCCeEEEEccch--HHHHh---ccCCeEEEEcCC-------
Q 012774 107 EIPILYFSLLSLGVIISPANPVNTE-----SEISRQIQLSNPVIAFATSSV--VHKLA---KLKHRTILIDSP------- 169 (456)
Q Consensus 107 ~~~~~~la~~~~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~vi~~~~~--~~~~~---~~~~~~~~~~~~------- 169 (456)
+++++++||+++|++++|++|.++. +++.++++.++++++|+++.. ...+. ....+++.++..
T Consensus 117 e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 196 (624)
T PRK12582 117 EHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDLLDVTVVHVTGPGEGIASI 196 (624)
T ss_pred HHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhhcCceEEEEcCCCcccccc
Confidence 9999999999999999999998874 899999999999999998642 11111 123344444321
Q ss_pred chhhhhcccCCC-ccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCC---CCcEEEEecchhh
Q 012774 170 EFDSMTMSWNSK-HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRV---SPAVMLFTMPYFH 245 (456)
Q Consensus 170 ~~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~---~~~~~~~~~p~~~ 245 (456)
.+.++....... .........++++++++|||||||.||+|+++|+++..+........ ... ..++++.++|++|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~-~~~~~~~~~~~l~~lPl~h 275 (624)
T PRK12582 197 AFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLR-PREPDPPPPVSLDWMPWNH 275 (624)
T ss_pred cHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhc-cccCCCCCceEEEechHHH
Confidence 233332211100 00111234568999999999999999999999999988766554333 222 3579999999999
Q ss_pred HhhH-HHHHHHhHhcceEEEecC-CCH---HHHHHHHHHhcceeEEecHHHHHHHhcCCCCC----CCCCCCceEEEecC
Q 012774 246 IYGL-FFCFRAAALMETAVVMQR-FDL---KMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTD----GYDLSSLETVACGA 316 (456)
Q Consensus 246 ~~g~-~~~~~~l~~G~~~~~~~~-~~~---~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~----~~~l~~lr~v~~gG 316 (456)
.+++ ..++.++..|+++++.+. +++ ..+++.++++++|+++++|+++..|.+..... ...++++|.+++||
T Consensus 276 ~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~slr~i~~gG 355 (624)
T PRK12582 276 TMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNLRLMAYGG 355 (624)
T ss_pred HHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhheeEEEecC
Confidence 9998 445678889999988753 333 45677788999999999999999887643222 13468999999999
Q ss_pred CCCCHHHHHHHHHhC-----CCCceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcce
Q 012774 317 APLGKDTIMAFASKF-----PKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGE 391 (456)
Q Consensus 317 ~~~~~~~~~~~~~~~-----~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Ge 391 (456)
+++++++.+.+++.+ .++++++.||+||++.++.... ....+.+++|+|+||++++|++ .|+.||
T Consensus 356 a~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~--~~~~~~~svG~p~pg~~v~i~~--------~G~~GE 425 (624)
T PRK12582 356 ATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTH--WDTERVGLIGLPLPGVELKLAP--------VGDKYE 425 (624)
T ss_pred CCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeeccc--CCCCCCCCCCcCCCCcEEEEcc--------CCCceE
Confidence 999999999998863 1468999999999987654321 1224568999999999999964 467899
Q ss_pred EEEecCCcccccCCCccccccccCCCCeeeccceEEE-c---cCCcEEEecccccceee-CCeeecCCCC
Q 012774 392 LSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYI-D---EDGFLFIVDRLKDLIKY-KGYQVLPLLN 456 (456)
Q Consensus 392 l~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~-~---~dg~l~~~GR~~d~ik~-~G~~v~p~e~ 456 (456)
|+++|+.++.||+++++.+.+.|+.+|||+|||+|++ | ++|+|+|.||+||+||+ +|++|+|.|+
T Consensus 426 l~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~i 495 (624)
T PRK12582 426 VRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTL 495 (624)
T ss_pred EEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHH
Confidence 9999999999999999999999988999999999998 4 46999999999999996 6999998753
No 53
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=3.5e-58 Score=461.77 Aligned_cols=404 Identities=27% Similarity=0.405 Sum_probs=346.2
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
-++.+++.+++ .+ |+++|+.+. .++.+||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||++
T Consensus 3 ~~l~~~~~~~~-~~----~~~~a~~~~-~~~~~Ty~eL~~~~~~la~~L~~-~g~~~gd~v~i~~~~~~e~~v~~la~~~ 75 (504)
T PRK07514 3 NNLFDALRAAF-AD----RDAPFIETP-DGLRYTYGDLDAASARLANLLVA-LGVKPGDRVAVQVEKSPEALALYLATLR 75 (504)
T ss_pred ccHHHHHHHHh-hC----CCCeEEEeC-CCCEEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 47899999999 77 999999874 36899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc----CCe-EEEEcCCc---hhhhhcccCCCccccccCC
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHR-TILIDSPE---FDSMTMSWNSKHELDRAKV 189 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 189 (456)
+|++++|+++..+.+++..+++.++++++++++.....+... ... ++.++... +.+..... .........
T Consensus 76 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 153 (504)
T PRK07514 76 AGAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAGAPHVETLDADGTGSLLEAAAAA--PDDFETVPR 153 (504)
T ss_pred cCcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccCCceEEEecCCCcccHHHhhhhc--CcccCcccC
Confidence 999999999999999999999999999999998776654422 222 33333211 11111110 001112345
Q ss_pred CCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhH-HHHHHHhHhcceEEEecCC
Q 012774 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRF 268 (456)
Q Consensus 190 ~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~~~~~~~ 268 (456)
..+++++++|||||||.||+|.++|+++...+......+ ...+++++++.+|++|..++ ..++.++..|+++++.+..
T Consensus 154 ~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~ 232 (504)
T PRK07514 154 GADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYW-RFTPDDVLIHALPIFHTHGLFVATNVALLAGASMIFLPKF 232 (504)
T ss_pred CCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHh-CCCCccEEEEecchHHHHHHHHHHHHHHhcCcEEEECCCC
Confidence 678999999999999999999999999998887766666 67788999999999999988 5677899999999999999
Q ss_pred CHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccc
Q 012774 269 DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAG 348 (456)
Q Consensus 269 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~ 348 (456)
++..+++.+. ++|++.++|+++..++.........++++|.+++||+++++++.+.|.+.+ +.++++.||+||++..
T Consensus 233 ~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~ 309 (504)
T PRK07514 233 DPDAVLALMP--RATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERT-GHAILERYGMTETNMN 309 (504)
T ss_pred CHHHHHHHHH--hheeeecHHHHHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHh-CCcceeeccccccccc
Confidence 9999999994 799999999999999887666666788999999999999999999999987 7899999999999765
Q ss_pred cccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEE
Q 012774 349 VFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYI 428 (456)
Q Consensus 349 ~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~ 428 (456)
.... ........++|.|+++++++|+|++++.+++.|+.|||+++|+.++.||+++++.+.+.|..++||+|||+|++
T Consensus 310 ~~~~--~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~ 387 (504)
T PRK07514 310 TSNP--YDGERRAGTVGFPLPGVSLRVTDPETGAELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKI 387 (504)
T ss_pred ccCC--ccccccCcccccCCCCcEEEEEECCCCCCCCCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEE
Confidence 4432 12223457899999999999999889999999999999999999999999999999999987899999999999
Q ss_pred ccCCcEEEecccccceeeCCeeecCCCC
Q 012774 429 DEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 429 ~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+++|++++.||.||+||++|++|+|.|+
T Consensus 388 ~~~g~~~~~GR~~~~i~~~G~~i~~~~I 415 (504)
T PRK07514 388 DERGYVHIVGRGKDLIISGGYNVYPKEV 415 (504)
T ss_pred cCCccEEEeccccceEEeCCeEECHHHH
Confidence 9999999999999999999999999874
No 54
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=1.1e-58 Score=513.25 Aligned_cols=401 Identities=20% Similarity=0.266 Sum_probs=345.7
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
.++.++|.+.++.+ |+++|+++. ++.+||+||.++++++|+.|.+ .|+++|++|+++++++++++++++||++
T Consensus 458 ~~l~~~~~~~~~~~----p~~~Al~~~--~~~~Ty~eL~~~~~~la~~L~~-~g~~~g~~V~l~~~~~~~~i~~~la~~~ 530 (1296)
T PRK10252 458 TTLSALVAQQAAKT----PDAPALADA--RYQFSYREMREQVVALANLLRE-RGVKPGDSVAVALPRSVFLTLALHAIVE 530 (1296)
T ss_pred CCHHHHHHHHHHhC----CCCeEEEcC--CCcEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHH
Confidence 68999999999999 999999988 7899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhccC-CeEEEEcCCchhhhhcccCCCccccccCCCCCCEEE
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK-HRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 196 (456)
+|++++|++|..+.+++.++++.+++++++++.+....+.... ......+ ....... ........++++++
T Consensus 531 ~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~a~ 602 (1296)
T PRK10252 531 AGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADVPDLTSLCYN-----APLAPQG---AAPLQLSQPHHTAY 602 (1296)
T ss_pred hCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccCCCceeeecc-----ccccccc---CCCCCCCCCCCeEE
Confidence 9999999999999999999999999999999987766554321 1111111 1000000 11112235789999
Q ss_pred EEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEec---CCCHHHH
Q 012774 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ---RFDLKMM 273 (456)
Q Consensus 197 i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~---~~~~~~~ 273 (456)
++|||||||.||||+++|+++.+.+......+ ...+++++++..|++|..++..++.++..|+++++.+ ..++..+
T Consensus 603 i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~ 681 (1296)
T PRK10252 603 IIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHY-PLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAM 681 (1296)
T ss_pred EEECCCCCCCCCEEEeccHHHHHHHHHHHHhc-CCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECChhccCCHHHH
Confidence 99999999999999999999999988887777 6888999999999999998888999999999999976 3689999
Q ss_pred HHHHHHhcceeEEecHHHHHHHhcCCCCCC--CCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCcccccccccc
Q 012774 274 LKAVEEFRVTHAAVTPPIVVAMSKGGSTDG--YDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFR 351 (456)
Q Consensus 274 ~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~--~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~ 351 (456)
++.|+++++|++.++|+++..+++...... ..++++|.+++|||++++++.+.|.+.+ +.++++.||+||++..++.
T Consensus 682 ~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~ 760 (1296)
T PRK10252 682 QQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPADLCREWQQLT-GAPLHNLYGPTEAAVDVSW 760 (1296)
T ss_pred HHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCCCCHHHHHHHHhcC-CCEEEeCCCcchhhheeee
Confidence 999999999999999999999887643322 3468999999999999999999999887 8899999999999876554
Q ss_pred ccCCCC-----CCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCC------Cee
Q 012774 352 TVGPDE-----CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPD------GWM 420 (456)
Q Consensus 352 ~~~~~~-----~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~------g~~ 420 (456)
...... .....++|+|+++++++|+| +.+++++.|+.|||+|+|+.+++||+++++.|.+.|..+ +||
T Consensus 761 ~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y 839 (1296)
T PRK10252 761 YPAFGEELAAVRGSSVPIGYPVWNTGLRILD-ARMRPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMY 839 (1296)
T ss_pred eecccccccccCCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEecccccchhhCCCcccchhhcccCCCCCCCEEE
Confidence 322111 22346799999999999999 789999999999999999999999999999999988654 499
Q ss_pred eccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 421 RTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 421 ~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+|||+|++++||+++++||.|++||++|+||+|.||
T Consensus 840 ~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~eI 875 (1296)
T PRK10252 840 RTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGEI 875 (1296)
T ss_pred ecCceEEEcCCCcEEEecccCCeEEEeeEEecHHHH
Confidence 999999999999999999999999999999999875
No 55
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=5.7e-58 Score=464.33 Aligned_cols=407 Identities=26% Similarity=0.412 Sum_probs=342.1
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
.++.+++.+.++.+ |+++|+++. +++++||+||.++++++|+.|++ .|+++||+|+++++|+++++++++||++
T Consensus 23 ~~l~~~~~~~~~~~----pd~~a~~~~-~~~~~Ty~~l~~~v~~la~~l~~-~G~~~gd~V~i~~~n~~~~~~~~lA~~~ 96 (547)
T PRK06087 23 ASLADYWQQTARAM----PDKIAVVDN-HGASYTYSALDHAASRLANWLLA-KGIEPGDRVAFQLPGWCEFTIIYLACLK 96 (547)
T ss_pred CCHHHHHHHHHHHC----CCceEEEcC-CCCEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 57999999999999 999999875 34799999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccch-----HHHHh----cc-CC-eEEEEcCC-------chhhhhcccC
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSV-----VHKLA----KL-KH-RTILIDSP-------EFDSMTMSWN 179 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~----~~-~~-~~~~~~~~-------~~~~~~~~~~ 179 (456)
+|++++|+++..+.+++.++++.++++++++++.. .+.+. .. .. .++.++.. .+..+.....
T Consensus 97 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (547)
T PRK06087 97 VGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSLSLSQIIADYE 176 (547)
T ss_pred cCcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCcCCCcCccCHHHHhccCC
Confidence 99999999999999999999999999999997532 11111 11 11 23333321 1122211111
Q ss_pred CCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhH-HHHHHHhHh
Q 012774 180 SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAAL 258 (456)
Q Consensus 180 ~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~ 258 (456)
. .........+++++++|||||||.||+|.++|.++..........+ ...+++++++.+|++|.+++ ..++.++..
T Consensus 177 ~--~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~ 253 (547)
T PRK06087 177 P--LTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARL-NLTWQDVFMMPAPLGHATGFLHGVTAPFLI 253 (547)
T ss_pred c--ccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-CCCCCCeEEEecchHHHHHHHHHHHHHHhc
Confidence 0 1112234568999999999999999999999999988777666555 57889999999999999987 567788899
Q ss_pred cceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEe
Q 012774 259 METAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (456)
Q Consensus 259 G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~ 338 (456)
|+++++.+.+++..+++.|+++++|+++.+|+.+..+++.......+++++|.+++||+++++++.+.+.+. ++++++
T Consensus 254 g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~~~~--~~~l~~ 331 (547)
T PRK06087 254 GARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVARECQQR--GIKLLS 331 (547)
T ss_pred CCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHHHHc--CCcEEE
Confidence 999999999999999999999999999988888877777655555678899999999999999999988875 899999
Q ss_pred ccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCC
Q 012774 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDG 418 (456)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g 418 (456)
.||+||++...+...........+++|+|++++.++++| +++.+++.|+.|||+++|+.++.||+++++.+...+..+|
T Consensus 332 ~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g 410 (547)
T PRK06087 332 VYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVD-EARKTLPPGCEGEEASRGPNVFMGYLDEPELTARALDEEG 410 (547)
T ss_pred EecccccCCccccCCCcchhhcCCcCCccCCCceEEEEc-CCCCCCcCCCcceEEEecccccccccCCHHHHHHHhCCCC
Confidence 999999987765432211122346789999999999999 7788999999999999999999999999999988887789
Q ss_pred eeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 419 WMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 419 ~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
||+|||+++++++|+++++||.||+|+.+|++|+|.++
T Consensus 411 ~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~i 448 (547)
T PRK06087 411 WYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREV 448 (547)
T ss_pred CcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHHH
Confidence 99999999999999999999999999999999999764
No 56
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.2e-58 Score=463.76 Aligned_cols=409 Identities=25% Similarity=0.372 Sum_probs=333.2
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
-|+.+++.+.++++ |+++|+++....+.+||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||++
T Consensus 16 ~~l~~~l~~~a~~~----p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~-~gv~~gd~V~i~~~n~~~~~~~~lA~~~ 90 (534)
T PRK05852 16 PRIADLVEVAATRL----PEAPALVVTADRIAISYRDLARLVDDLAGQLTR-SGLLPGDRVALRMGSNAEFVVALLAASR 90 (534)
T ss_pred ccHHHHHHHHHHhC----CCCcEEEecCCCCcccHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence 48999999999998 999999886555689999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc--C--CeEEEEcCCc------hhh-hhcccCCCccccc
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL--K--HRTILIDSPE------FDS-MTMSWNSKHELDR 186 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~--~--~~~~~~~~~~------~~~-~~~~~~~~~~~~~ 186 (456)
+|++++|+++.++.+++.++++.++++++|++.......... . ...+.+.... +.. .............
T Consensus 91 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (534)
T PRK05852 91 ADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTTRWWPLTVNVGGDSGPSGGTLSVHLDAATEPTPATST 170 (534)
T ss_pred cCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccccccceeeeecccccccccccccccccccCCCccccc
Confidence 999999999999999999999999999999876533221110 0 0111111100 000 0000000000011
Q ss_pred cCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhH-HHHHHHhHhcceEEEe
Q 012774 187 AKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVM 265 (456)
Q Consensus 187 ~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~~~~ 265 (456)
.....++.++++|||||||.||+|.++|+++...+......+ ....+|++++.+|++|.+++ ..++.++..|+++++.
T Consensus 171 ~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~ 249 (534)
T PRK05852 171 PEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGY-RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLP 249 (534)
T ss_pred cCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh-CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeC
Confidence 112246789999999999999999999999998888777766 67889999999999999998 4567788888888875
Q ss_pred c--CCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCC--CCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccC
Q 012774 266 Q--RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTD--GYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYG 341 (456)
Q Consensus 266 ~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~--~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG 341 (456)
. .+++..+++.|+++++|+++++|+++..|.+..... ...++++|.++++|+++++++++.+.+.+ +.++++.||
T Consensus 250 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~-~~~v~~~YG 328 (534)
T PRK05852 250 ARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLTAETAQALQTEF-AAPVVCAFG 328 (534)
T ss_pred CCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCCCHHHHHHHHHHh-CCChhhccC
Confidence 4 478999999999999999999999999998765322 23468999999999999999999999998 889999999
Q ss_pred ccccccccccccCC------CCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccC
Q 012774 342 LTESTAGVFRTVGP------DECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLL 415 (456)
Q Consensus 342 ~tE~~~~~~~~~~~------~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~ 415 (456)
+||++..++..... ......+..|. .++++++|+| ++++.+++|+.|||+++|+.+++||+++++.+.+.|
T Consensus 329 ~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~-~~g~~~~i~d-~~g~~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~- 405 (534)
T PRK05852 329 MTEATHQVTTTQIEGIGQTENPVVSTGLVGR-STGAQIRIVG-SDGLPLPAGAVGEVWLRGTTVVRGYLGDPTITAANF- 405 (534)
T ss_pred ccccchhhhcCCccccccccCcccccccCCC-CCCCeEEEEC-CCCCCCCCCCceEEEEecCcccchhcCCcccchhhh-
Confidence 99998765542211 01112233444 7999999999 678899999999999999999999999999999888
Q ss_pred CCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 416 PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 416 ~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
.+|||+|||+|++|+||++++.||.||+||++|.+|+|.|+
T Consensus 406 ~~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~i 446 (534)
T PRK05852 406 TDGWLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERV 446 (534)
T ss_pred cCCCcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHH
Confidence 58999999999999999999999999999999999999764
No 57
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=1.7e-58 Score=513.47 Aligned_cols=410 Identities=17% Similarity=0.205 Sum_probs=336.8
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEEC-------CCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINS-------VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~-------~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~ 110 (456)
-++++++.++++.+ |+++|+++. ..++++||+||.++++++|+.|.+ .|+++|++|+++++|++++++
T Consensus 236 ~~l~~~~~~~a~~~----pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~-~gv~~g~~V~i~~~~~~~~i~ 310 (1389)
T TIGR03443 236 GAIHDIFADNAEKH----PDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLK-TGIKRGDVVMIYAYRGVDLVV 310 (1389)
T ss_pred CcHHHHHHHHHHhC----CCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEecCCHHHHH
Confidence 47999999999999 999999863 135789999999999999999998 899999999999999999999
Q ss_pred HHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccch---HHHHhc-----c----CCeEEEEcCC-ch------
Q 012774 111 LYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSV---VHKLAK-----L----KHRTILIDSP-EF------ 171 (456)
Q Consensus 111 ~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---~~~~~~-----~----~~~~~~~~~~-~~------ 171 (456)
+++||+++|++++|++|.++.+++.++++.+++++++++... ...+.. . ....+.+... ..
T Consensus 311 ~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (1389)
T TIGR03443 311 AVMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDGSLVGGSLE 390 (1389)
T ss_pred HHHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEecccccccccccc
Confidence 999999999999999999999999999999999999986542 111110 0 0111111110 00
Q ss_pred ---hhhhcccCC-CccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHh
Q 012774 172 ---DSMTMSWNS-KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIY 247 (456)
Q Consensus 172 ---~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 247 (456)
......... ..........++++++++|||||||.||||+++|+++.+.+......+ +...+++++...|++|..
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~d~~~~~~~~~~d~ 469 (1389)
T TIGR03443 391 GGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRF-GLSENDKFTMLSGIAHDP 469 (1389)
T ss_pred cccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhc-CCCCCCEEEEecCceecc
Confidence 000000000 000111224578999999999999999999999999999887777776 678899999999999998
Q ss_pred hHHHHHHHhHhcceEEEecC---CCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHH
Q 012774 248 GLFFCFRAAALMETAVVMQR---FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTI 324 (456)
Q Consensus 248 g~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~ 324 (456)
++..++.++..|+++++.+. .++..+++.|+++++|+++++|+++..|.... ...++++|.+++||+++++...
T Consensus 470 ~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~ 546 (1389)
T TIGR03443 470 IQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA---TTPIPSLHHAFFVGDILTKRDC 546 (1389)
T ss_pred hHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc---cccCCCccEEEEecccCCHHHH
Confidence 88889999999999998864 36889999999999999999999999987543 2357899999999999999999
Q ss_pred HHHHHhCCCCceEeccCccccccccccccCCCC---------CCCCCccccccCCcEEEEEcCC-CCCCCCCCCcceEEE
Q 012774 325 MAFASKFPKVVLVQAYGLTESTAGVFRTVGPDE---------CRRWGSTGRLSAGLEAKIVDPE-TGDSLPPGKEGELSI 394 (456)
Q Consensus 325 ~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~---------~~~~~~~G~~~~~~~~~i~d~~-~~~~~~~g~~Gel~i 394 (456)
+++.+.+++.++++.||+||++..++....... .....++|+|+++++++|+|++ .+++++.|+.|||+|
T Consensus 547 ~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~~G~~GEL~i 626 (1389)
T TIGR03443 547 LRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVNRNDRTQTCGVGEVGEIYV 626 (1389)
T ss_pred HHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEECCccCCCcCCCCCceEEEe
Confidence 999998889999999999999876554221111 1123578999999999999954 357899999999999
Q ss_pred ecCCcccccCCCccccccccC----------------------------CCCeeeccceEEEccCCcEEEecccccceee
Q 012774 395 RGPTIMKGYVGEPEVTSATLL----------------------------PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKY 446 (456)
Q Consensus 395 ~g~~~~~gy~~~~~~~~~~~~----------------------------~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~ 446 (456)
+|+++++||+++|+.|.+.|. .++||+|||+|++++||+|+|+||.||+||+
T Consensus 627 ~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~~~GR~dd~Iki 706 (1389)
T TIGR03443 627 RAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNVECCGRADDQVKI 706 (1389)
T ss_pred cccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEcCCCCEEEecccCCEEEe
Confidence 999999999999999998873 2579999999999999999999999999999
Q ss_pred CCeeecCCCC
Q 012774 447 KGYQVLPLLN 456 (456)
Q Consensus 447 ~G~~v~p~e~ 456 (456)
+|+||+|.||
T Consensus 707 ~G~rI~p~eI 716 (1389)
T TIGR03443 707 RGFRIELGEI 716 (1389)
T ss_pred CcEEecHHHH
Confidence 9999999875
No 58
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=9e-58 Score=464.40 Aligned_cols=412 Identities=27% Similarity=0.377 Sum_probs=344.5
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
.++.++|.+.++++ |+++|+++...++.+||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||++
T Consensus 18 ~~l~~~l~~~~~~~----p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~-~gi~~g~~V~i~~~~~~~~~~~~~a~~~ 92 (558)
T PRK12583 18 QTIGDAFDATVARF----PDREALVVRHQALRYTWRQLADAVDRLARGLLA-LGVQPGDRVGIWAPNCAEWLLTQFATAR 92 (558)
T ss_pred CcHHHHHHHHHHHC----CCCeEEEecCCCcEecHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCChHHHHHHHHHHh
Confidence 68999999999999 999999987567899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchH-----HHHh----cc--------------CC-eEEEEcCC----
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV-----HKLA----KL--------------KH-RTILIDSP---- 169 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~----~~--------------~~-~~~~~~~~---- 169 (456)
+|++++++++..+.+++.++++.++++++|+++... ..+. .. .. .++..+..
T Consensus 93 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (558)
T PRK12583 93 IGAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAPPPG 172 (558)
T ss_pred hCCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCCCcc
Confidence 999999999999999999999999999999876432 1111 00 00 11111111
Q ss_pred --chhhhhcccCC----CccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecch
Q 012774 170 --EFDSMTMSWNS----KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPY 243 (456)
Q Consensus 170 --~~~~~~~~~~~----~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~ 243 (456)
.|++....... ..........+++.++++|||||||.||+|.++|+++.+++......+ +...+|++++.+|+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~~~~~p~ 251 (558)
T PRK12583 173 FLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESL-GLTEHDRLCVPVPL 251 (558)
T ss_pred ccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHh-CCCCCCeEEEecCc
Confidence 12222111100 000111234568899999999999999999999999988887776666 67888999999999
Q ss_pred hhHhhH-HHHHHHhHhcceEEEec-CCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCH
Q 012774 244 FHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGK 321 (456)
Q Consensus 244 ~~~~g~-~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~ 321 (456)
+|.+|. ..++.++..|+++++.. .+++..+++.++++++|+++++|+++..++........+++++|.+++||+++++
T Consensus 252 ~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~i~~~G~~~~~ 331 (558)
T PRK12583 252 YHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSLRTGIMAGAPCPI 331 (558)
T ss_pred hhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhheEEEecCCCCCH
Confidence 999998 56778888899888653 5789999999999999999999999998887665555678999999999999999
Q ss_pred HHHHHHHHhCCCCceEeccCccccccccccccCC-CCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcc
Q 012774 322 DTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGP-DECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIM 400 (456)
Q Consensus 322 ~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~ 400 (456)
++.+++.+.+++..+++.||+||++.+....... ....+..++|+|.+++.++|+|++ +..++.|+.|||+++|+.++
T Consensus 332 ~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~-~~~~~~g~~Gel~v~g~~~~ 410 (558)
T PRK12583 332 EVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDPD-GATVPRGEIGELCTRGYSVM 410 (558)
T ss_pred HHHHHHHHHcCCcceeccccccccccceeccCcccccccccCCCCccCCCCeEEEECCC-CCCCCCCCeeEEEEEeCccc
Confidence 9999999998677899999999999876543221 122345789999999999999955 89999999999999999999
Q ss_pred cccCCCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 401 KGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 401 ~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
.||+++++.+...++.++||+|||+|++++||++++.||.||+||++|++|+|.|+
T Consensus 411 ~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~I 466 (558)
T PRK12583 411 KGYWNNPEATAESIDEDGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREI 466 (558)
T ss_pred hhhcCChHHHHhhcCCCCCeeccceEEECCCccEEEEecccceeEECCEEeCHHHH
Confidence 99999999998888778999999999999999999999999999999999999764
No 59
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.7e-58 Score=472.94 Aligned_cols=403 Identities=25% Similarity=0.361 Sum_probs=322.8
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECC-------CCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSV-------TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~-------~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~ 110 (456)
+|+.+++.+.++++ |+++|+++.+ ..+++||+||.++++++|++|.+ . +++||+|+++++|++++++
T Consensus 34 ~~~~~~~~~~~~~~----~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~-~-~~~gd~V~l~~~n~~e~~~ 107 (612)
T PRK12476 34 TTLISLIERNIANV----GDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQ-V-AGPGDRVAILAPQGIDYVA 107 (612)
T ss_pred CcHHHHHHHHHHhC----CCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHH-h-cCCCCEEEEECCCChhHHH
Confidence 78999999888888 9999998631 12489999999999999999998 4 8999999999999999999
Q ss_pred HHHHHHHhCCeEecC-CCCCC--HHHHHHHhhhcCCeEEEEccchHHHHhc----cC----CeEEEEcCCchhhhhcccC
Q 012774 111 LYFSLLSLGVIISPA-NPVNT--ESEISRQIQLSNPVIAFATSSVVHKLAK----LK----HRTILIDSPEFDSMTMSWN 179 (456)
Q Consensus 111 ~~la~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~ 179 (456)
+++||+++|++++|+ ++..+ .+++.+++++++++++|++++....+.. .. ..++.++.. ....
T Consensus 108 ~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~~~- 181 (612)
T PRK12476 108 GFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAIDAI-----PDSA- 181 (612)
T ss_pred HHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEeccc-----cccc-
Confidence 999999999999999 57766 7899999999999999998876654431 11 123333211 0000
Q ss_pred CCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCC-CCCCcEEEEecchhhHhhHHHHHHHhHh
Q 012774 180 SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK-RVSPAVMLFTMPYFHIYGLFFCFRAAAL 258 (456)
Q Consensus 180 ~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~g~~~~~~~l~~ 258 (456)
..........++++++++|||||||.||+|+++|+++..++......+ . ..+++++++++|++|.+++...+.+++.
T Consensus 182 -~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~~~~~l~~~Pl~h~~g~~~~~~~~~~ 259 (612)
T PRK12476 182 -GESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSI-DLLDRNTHGVSWLPLYHDMGLSMIGFPAVY 259 (612)
T ss_pred -cccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHh-ccCCCCceEEEeCCcccccchHHHHHHHhc
Confidence 001111234568999999999999999999999999987766555444 4 5778999999999999999766666666
Q ss_pred cceEEEecC--C--CHHHHHHHHH--HhcceeEEecHHHHHHHhcCCC----CCCCCCCCceEEEecCCCCCHHHHHHHH
Q 012774 259 METAVVMQR--F--DLKMMLKAVE--EFRVTHAAVTPPIVVAMSKGGS----TDGYDLSSLETVACGAAPLGKDTIMAFA 328 (456)
Q Consensus 259 G~~~~~~~~--~--~~~~~~~~i~--~~~~t~~~~~P~~~~~l~~~~~----~~~~~l~~lr~v~~gG~~~~~~~~~~~~ 328 (456)
|++.++... + ++..+++.++ ++++++++.+|+++..++.... ....+++++| +++||+++++++.++|+
T Consensus 260 gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~~gg~~~~~~~~~~~~ 338 (612)
T PRK12476 260 GGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LIIGSEPVSIDAVTTFN 338 (612)
T ss_pred CCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EEecccCCCHHHHHHHH
Confidence 777666542 3 8899999995 4899999999999887776421 1244688999 99999999999999999
Q ss_pred HhCC-----CCceEeccCccccccccccccCCCC-------------------------CCCCCccccccCCcEEEEEcC
Q 012774 329 SKFP-----KVVLVQAYGLTESTAGVFRTVGPDE-------------------------CRRWGSTGRLSAGLEAKIVDP 378 (456)
Q Consensus 329 ~~~~-----~~~i~~~yG~tE~~~~~~~~~~~~~-------------------------~~~~~~~G~~~~~~~~~i~d~ 378 (456)
+.|+ ...+++.||+||++..++....... ....+++|+|+++++++|+|+
T Consensus 339 ~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v~ivd~ 418 (612)
T PRK12476 339 KAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQWAVIVDP 418 (612)
T ss_pred HHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCEEEEEeC
Confidence 9772 3459999999998765433211100 011257899999999999996
Q ss_pred CCCCCCCCCCcceEEEecCCcccccCCCccccccccCC------------------CCeeeccceEEEccCCcEEEeccc
Q 012774 379 ETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP------------------DGWMRTGDLCYIDEDGFLFIVDRL 440 (456)
Q Consensus 379 ~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~------------------~g~~~TGDl~~~~~dg~l~~~GR~ 440 (456)
+++++++.|+.|||+++|++++.||+++++.|.+.|.. ++||+|||+|++ +||+|+|.||+
T Consensus 419 ~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~-~dG~l~i~GR~ 497 (612)
T PRK12476 419 DTGAELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVY-LDGELYITGRI 497 (612)
T ss_pred CCCcCCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeecccccee-ECCEEEEEecc
Confidence 66999999999999999999999999999999888741 359999999998 59999999999
Q ss_pred ccceeeCCeeecCCCC
Q 012774 441 KDLIKYKGYQVLPLLN 456 (456)
Q Consensus 441 ~d~ik~~G~~v~p~e~ 456 (456)
||+||++|++|+|.||
T Consensus 498 ~d~I~~~G~~I~p~eI 513 (612)
T PRK12476 498 ADLIVIDGRNHYPQDI 513 (612)
T ss_pred CcEEEECCcccCHHHH
Confidence 9999999999999875
No 60
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.5e-58 Score=460.88 Aligned_cols=409 Identities=27% Similarity=0.411 Sum_probs=340.4
Q ss_pred CCCCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHH
Q 012774 36 APISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (456)
Q Consensus 36 ~~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~ 115 (456)
..+|+.+++...++++ |+++|+++. +.++||+||.++++++|..|.+ .|+++|++|+++++|+++++++++||
T Consensus 5 ~~~~~~~~~~~~a~~~----p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~-~g~~~g~~v~i~~~~~~~~~~~~lA~ 77 (528)
T PRK07470 5 RVMNLAHFLRQAARRF----PDRIALVWG--DRSWTWREIDARVDALAAALAA-RGVRKGDRILVHSRNCNQMFESMFAA 77 (528)
T ss_pred cCCCHHHHHHHHHHHC----CCceEEEEC--CccccHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 4489999999999999 999999987 7899999999999999999998 89999999999999999999999999
Q ss_pred HHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc------CCeEEEEcC----CchhhhhcccCCCcccc
Q 012774 116 LSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL------KHRTILIDS----PEFDSMTMSWNSKHELD 185 (456)
Q Consensus 116 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~------~~~~~~~~~----~~~~~~~~~~~~~~~~~ 185 (456)
+++|++++|+++..+.+++.++++.+++++++++++........ ...++.++. .++.++....... ...
T Consensus 78 ~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 156 (528)
T PRK07470 78 FRLGAVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGGARAGLDYEALVARHLGA-RVA 156 (528)
T ss_pred HhCCeEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCCCcccccHHHHHhcCCCC-CCC
Confidence 99999999999999999999999999999999998765443311 112333322 2233332221111 112
Q ss_pred ccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCC-CCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEE
Q 012774 186 RAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS-PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVV 264 (456)
Q Consensus 186 ~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~ 264 (456)
.....++++++++|||||||.||+|.++|+++...+....... .+....|+++..+|++|.+++..++ .+..|++.++
T Consensus 157 ~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~-~~~~g~~~~~ 235 (528)
T PRK07470 157 NAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIHQLC-QVARGAATVL 235 (528)
T ss_pred cccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHHHHH-HHhcCceEEE
Confidence 2334668899999999999999999999999876544322222 2456789999999999999886554 5667777766
Q ss_pred ec--CCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCc
Q 012774 265 MQ--RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGL 342 (456)
Q Consensus 265 ~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~ 342 (456)
.+ .++++.+++.|+++++|++.++|++++.+.+........++++|.+++||++++++..+++.+.+ +..+++.||+
T Consensus 236 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~~~YG~ 314 (528)
T PRK07470 236 LPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRALAKL-GKVLVQYFGL 314 (528)
T ss_pred ecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHHHHHh-CcHHHHhCCC
Confidence 64 57899999999999999999999999999887666666789999999999999999999998888 7889999999
Q ss_pred cccccccccccCC------CCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCC
Q 012774 343 TESTAGVFRTVGP------DECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP 416 (456)
Q Consensus 343 tE~~~~~~~~~~~------~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~ 416 (456)
||+++.+...... ......+++|.|+++++++++| +++++++.|+.|||+++|+.++.||+++++.+.+.| .
T Consensus 315 TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~-~ 392 (528)
T PRK07470 315 GEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQD-DEGRELPPGETGEICVIGPAVFAGYYNNPEANAKAF-R 392 (528)
T ss_pred cccCCceeecchhhccccccccceeeccCcccCCcEEEEEC-CCCCCCCCCCceEEEEeCCccchhhcCCHHHHHhhh-c
Confidence 9998765432110 0122457899999999999999 678899999999999999999999999999998887 5
Q ss_pred CCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 417 DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 417 ~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+|||+|||+|++++||++++.||.||+||++|++|+|.||
T Consensus 393 ~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~I 432 (528)
T PRK07470 393 DGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPREI 432 (528)
T ss_pred CCcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHHH
Confidence 8999999999999999999999999999999999999764
No 61
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.1e-57 Score=460.98 Aligned_cols=411 Identities=24% Similarity=0.388 Sum_probs=339.0
Q ss_pred CCCCCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHH
Q 012774 35 DAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (456)
Q Consensus 35 ~~~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la 114 (456)
..+.++.+++...++++ |+++|+++. +..+||+||.++++++|..|.+ .|+++||+|+++++|+++++++++|
T Consensus 20 ~~~~~i~~~l~~~a~~~----p~~~a~~~~--~~~lTy~~l~~~~~~~a~~L~~-~gi~~gd~V~i~~~n~~~~~~~~la 92 (557)
T PRK07059 20 SQYPSLADLLEESFRQY----ADRPAFICM--GKAITYGELDELSRALAAWLQS-RGLAKGARVAIMMPNVLQYPVAIAA 92 (557)
T ss_pred CCCCCHHHHHHHHHHHc----CCCceEEEc--CceeeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHH
Confidence 44468999999999999 999999987 7899999999999999999999 8999999999999999999999999
Q ss_pred HHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc----CCe-EEEEcCC--------------------
Q 012774 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHR-TILIDSP-------------------- 169 (456)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~~~-~~~~~~~-------------------- 169 (456)
|+++|++++|++|..+.+++.++++.++++++++++.....+... ... +++....
T Consensus 93 ~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (557)
T PRK07059 93 VLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKTAVKHVVVASMGDLLGFKGHIVNFVVRRVKKM 172 (557)
T ss_pred HHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcccCCceeEEeccccccccccccccccccccccc
Confidence 999999999999999999999999999999999987765443321 111 1111100
Q ss_pred ----------chhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCC---C---CCC
Q 012774 170 ----------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP---K---RVS 233 (456)
Q Consensus 170 ----------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~---~---~~~ 233 (456)
.+.+...... ..........++++++++|||||||.||+|+++|.++..++........ . ...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~ 251 (557)
T PRK07059 173 VPAWSLPGHVRFNDALAEGA-RQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPD 251 (557)
T ss_pred ccccCCCCcccHHHHhhccC-CCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCC
Confidence 0111111110 0011123356789999999999999999999999999876543322110 1 123
Q ss_pred CcEEEEecchhhHhhH-HHHHHHhHhcceEEEec-CCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceE
Q 012774 234 PAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLET 311 (456)
Q Consensus 234 ~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~ 311 (456)
...+++.+|++|.+++ ...+.++..|++.++.+ ..++..+++.++++++|.+.++|+++..+.........+++++|.
T Consensus 252 ~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~ 331 (557)
T PRK07059 252 QLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIV 331 (557)
T ss_pred CcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheE
Confidence 4577888999999887 55667788888877665 458899999999999999999999999998876655667889999
Q ss_pred EEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcce
Q 012774 312 VACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGE 391 (456)
Q Consensus 312 v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Ge 391 (456)
++.||+++++.+.++|.+.+ ++++++.||+||++.++..... ......+++|.|+++++++|+| +++.+++.|+.||
T Consensus 332 ~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~vG~p~~g~~v~i~d-~~~~~~~~g~~Ge 408 (557)
T PRK07059 332 ANGGGMAVQRPVAERWLEMT-GCPITEGYGLSETSPVATCNPV-DATEFSGTIGLPLPSTEVSIRD-DDGNDLPLGEPGE 408 (557)
T ss_pred EEeccccCCHHHHHHHHHHh-CCCeeeccccccccchhhcCCC-CCCCcCCcccCccCCcEEEEEC-CCCCCCCCCCceE
Confidence 99999999999999999987 8999999999999887654322 2223457899999999999999 6789999999999
Q ss_pred EEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 392 LSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 392 l~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
|+++|+.++.||+++++.+.+.|..+|||+|||+|++++||++++.||.+|+||++|++|+|.|+
T Consensus 409 l~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~i 473 (557)
T PRK07059 409 ICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNEI 473 (557)
T ss_pred EEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcCCCcEEEecccccceEECCEEEcHHHH
Confidence 99999999999999999999888789999999999999999999999999999999999999764
No 62
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=2.9e-58 Score=551.16 Aligned_cols=404 Identities=21% Similarity=0.279 Sum_probs=351.0
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
.++++++.+.++++ |+++|+++. ++++||+||.++++++|+.|.+ .|+++|++|+++++|+++++++++||++
T Consensus 511 ~~~~~~~~~~a~~~----p~~~A~~~~--~~~~TY~eL~~~~~~lA~~L~~-~gv~~g~~V~l~~~~s~~~i~~~la~~~ 583 (5163)
T PRK12316 511 RGVHRLFEEQVERT----PEAPALAFG--EETLDYAELNRRANRLAHALIE-RGVGPDVLVGVAMERSIEMVVALLAILK 583 (5163)
T ss_pred CCHHHHHHHHHHHC----CCCeEEEeC--CceEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHH
Confidence 58999999999999 999999987 7899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-CCeEEEEcCCchhhhhcccCCCccccccCCCCCCEEE
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 196 (456)
+|++++|++|.++.+++.+++++++++++|++......+... ...++.++... ...... ..........++++++
T Consensus 584 aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~a~ 659 (5163)
T PRK12316 584 AGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPLAAGVQVLDLDRPA--AWLEGY--SEENPGTELNPENLAY 659 (5163)
T ss_pred cCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCcccCceEEEecCcc--hhhccC--CCCCCCCCCCCCCeEE
Confidence 999999999999999999999999999999998765554322 23344443211 111111 1112223456789999
Q ss_pred EEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEec---CCCHHHH
Q 012774 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ---RFDLKMM 273 (456)
Q Consensus 197 i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~---~~~~~~~ 273 (456)
++|||||||.||||+++|+++.+.+......+ +...++++++.+|++|..++..++.++..|+++++.+ .+++..+
T Consensus 660 ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~p~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~~~ 738 (5163)
T PRK12316 660 VIYTSGSTGKPKGAGNRHRALSNRLCWMQQAY-GLGVGDTVLQKTPFSFDVSVWEFFWPLMSGARLVVAAPGDHRDPAKL 738 (5163)
T ss_pred EEECCCcCCCCCEeeEcCHHHHHHHHHHHHhc-CCCCCCEEEeeCCeehHHHHHHHHHHHhCCCEEEECCccccCCHHHH
Confidence 99999999999999999999999998888877 6888999999999999999999999999999999985 4789999
Q ss_pred HHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCcccccccccccc
Q 012774 274 LKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTV 353 (456)
Q Consensus 274 ~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~ 353 (456)
++.|+++++|++.++|+++..|.+... ...++++|.+++|||++++++.+.|.+.+++.++++.||+||++..++...
T Consensus 739 ~~~i~~~~vt~~~~~Ps~~~~l~~~~~--~~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~ 816 (5163)
T PRK12316 739 VELINREGVDTLHFVPSMLQAFLQDED--VASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWT 816 (5163)
T ss_pred HHHHHHcCCeEEEeCHHHHHHHHhccc--cccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEe
Confidence 999999999999999999999987532 335789999999999999999999998888899999999999986554433
Q ss_pred CCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCC------CCeeeccceEE
Q 012774 354 GPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP------DGWMRTGDLCY 427 (456)
Q Consensus 354 ~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~------~g~~~TGDl~~ 427 (456)
.........++|+|++|++++|+| +++++++.|+.|||+|+|+++++||+++++.|++.|.. ++||+|||+|+
T Consensus 817 ~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~ 895 (5163)
T PRK12316 817 CVEEGGDSVPIGRPIANLACYILD-ANLEPVPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLAR 895 (5163)
T ss_pred cccccCCCCCCccccCCCEEEEEC-CCCCCCCCCCceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEE
Confidence 222333456899999999999999 67899999999999999999999999999999998843 35999999999
Q ss_pred EccCCcEEEecccccceeeCCeeecCCCC
Q 012774 428 IDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 428 ~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+++||+|+|+||+||+||++|+||+|.||
T Consensus 896 ~~~dG~l~~~GR~d~~ik~~G~rI~~~EI 924 (5163)
T PRK12316 896 YRADGVIEYAGRIDHQVKLRGLRIELGEI 924 (5163)
T ss_pred ECCCCCEEeecccCCEEEEceEEcChHHH
Confidence 99999999999999999999999999885
No 63
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-57 Score=456.16 Aligned_cols=392 Identities=26% Similarity=0.400 Sum_probs=326.9
Q ss_pred cccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCC
Q 012774 47 LRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 47 ~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~ 126 (456)
+++.+ ||++|+.+...++.+||+||.++++++|+.|.+ .|+.+||+|+++++|+++++++++||+++|++++|++
T Consensus 4 ~a~~~----p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~-~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~ 78 (488)
T PRK09088 4 HARLQ----PQRLAAVDLALGRRWTYAELDALVGRLAAVLRR-RGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLN 78 (488)
T ss_pred hhhhC----CCceEEEecCCCcEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeC
Confidence 34555 999999875457899999999999999999998 8999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEccchHHHHhccCCeEEEEcCCchhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCC
Q 012774 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGR 206 (456)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~ 206 (456)
+..+.+++.++++.++++++|+++...... ...+ .++.+.................+++++++|||||||.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~ 149 (488)
T PRK09088 79 WRLSASELDALLQDAEPRLLLGDDAVAAGR----TDVE-----DLAAFIASADALEPADTPSIPPERVSLILFTSGTSGQ 149 (488)
T ss_pred ccCCHHHHHHHHHhCCCCEEEEcchhhccc----cccc-----chhhhhhhccccccccCCCCCCCCceEEEeCCCCCCC
Confidence 999999999999999999999987543211 1111 1111111111010111223456789999999999999
Q ss_pred CchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhH-HHHHHHhHhcceEEEecCCCHHHHHHHHHH--hcce
Q 012774 207 VKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEE--FRVT 283 (456)
Q Consensus 207 PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~--~~~t 283 (456)
||+|.++|+++........... .....+++++.+|++|.+++ ..++.++..|+++++.+.+++..++..+.+ +++|
T Consensus 150 PK~v~~s~~~l~~~~~~~~~~~-~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~t 228 (488)
T PRK09088 150 PKGVMLSERNLQQTAHNFGVLG-RVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNGFEPKRTLGRLGDPALGIT 228 (488)
T ss_pred CcEEEEehHHHHHHHHHHHHhh-CCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHHHHhhccCCc
Confidence 9999999999987766555544 46788999999999999998 456678888999998888899999998864 8999
Q ss_pred eEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccCC-CCCCCCC
Q 012774 284 HAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGP-DECRRWG 362 (456)
Q Consensus 284 ~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~-~~~~~~~ 362 (456)
+++++|.++..+.+........++++|.+++||++++.+..+.+.+. +.++++.||+||++.+....... ....+.+
T Consensus 229 ~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~--g~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~ 306 (488)
T PRK09088 229 HYFCVPQMAQAFRAQPGFDAAALRHLTALFTGGAPHAAEDILGWLDD--GIPMVDGFGMSEAGTVFGMSVDCDVIRAKAG 306 (488)
T ss_pred EEeeHHHHHHHHHhCcCcCccccccceEEEecCCCCCHHHHHHHHHh--CCceeeeecccccccccccCCCcccccccCC
Confidence 99999999999987655455567899999999999999998888865 78999999999998754322111 1123557
Q ss_pred ccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEeccccc
Q 012774 363 STGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKD 442 (456)
Q Consensus 363 ~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d 442 (456)
++|.|.++++++|+| +++..++.|+.|||+++|++++.||+++++.+.+.++.+|||+|||+|++|++|++++.||.||
T Consensus 307 ~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d 385 (488)
T PRK09088 307 AAGIPTPTVQTRVVD-DQGNDCPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDADGFFWVVDRKKD 385 (488)
T ss_pred ccccCCCCcEEEEEC-CCCCCCcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcCCCcEEEeccccc
Confidence 899999999999999 6788899999999999999999999999999998887899999999999999999999999999
Q ss_pred ceeeCCeeecCCCC
Q 012774 443 LIKYKGYQVLPLLN 456 (456)
Q Consensus 443 ~ik~~G~~v~p~e~ 456 (456)
+||++|++|+|.|+
T Consensus 386 ~i~~~G~~i~~~~i 399 (488)
T PRK09088 386 MFISGGENVYPAEI 399 (488)
T ss_pred eEEeCCEEECHHHH
Confidence 99999999999764
No 64
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=1.8e-57 Score=469.15 Aligned_cols=413 Identities=18% Similarity=0.234 Sum_probs=326.0
Q ss_pred CCCCCHHHHhhhcc-cCCCCCCCCCcEEEECCCC------ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCc
Q 012774 35 DAPISAVDYVSSLR-ATLPWRDDDTVALINSVTG------LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE 107 (456)
Q Consensus 35 ~~~~~~~~~l~~~~-~~~~~~~p~~~A~~~~~~~------~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~ 107 (456)
.+.+|+.+.+.++. .+. |+++|+++.+++ +++||+||.++++++|+.|++ +|+++||+|+++++|+++
T Consensus 171 g~~ln~~~~~l~~~~~~~----pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~GdrVai~~pn~~e 245 (728)
T PLN03052 171 GAVLNVAECCLTPKPSKT----DDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDA-LGFEKGDAIAIDMPMNVH 245 (728)
T ss_pred CCEeEHHHHHHHHHhccC----CCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHH
Confidence 56678877666543 456 999999876332 489999999999999999998 999999999999999999
Q ss_pred HHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHH---------HHhc-cCCeEEEEc----------
Q 012774 108 IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVH---------KLAK-LKHRTILID---------- 167 (456)
Q Consensus 108 ~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~~~-~~~~~~~~~---------- 167 (456)
++++++||+++|++++|+++.++.+++.+++++++++++|+++.... .+.. ....++++.
T Consensus 246 ~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~ 325 (728)
T PLN03052 246 AVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGKSVRVKL 325 (728)
T ss_pred HHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCCcccccc
Confidence 99999999999999999999999999999999999999999875421 1111 111222222
Q ss_pred ---CCchhhhhcccCC---CccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEec
Q 012774 168 ---SPEFDSMTMSWNS---KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTM 241 (456)
Q Consensus 168 ---~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~ 241 (456)
...|+++...... ...........+++++|+|||||||.||+|+++|.+++.........+ ...++|++++..
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~-~l~~~d~~~~~~ 404 (728)
T PLN03052 326 REGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHL-DIRKGDIVCWPT 404 (728)
T ss_pred ccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhc-CCCCCcEEEECC
Confidence 1123333222110 001111123458999999999999999999999999876655544444 577889999999
Q ss_pred chhhHhhHHHHHHHhHhcceEEEecC-CCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCC
Q 012774 242 PYFHIYGLFFCFRAAALMETAVVMQR-FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLG 320 (456)
Q Consensus 242 p~~~~~g~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~ 320 (456)
++.|+.+...++.++..|+++++.+. .++..+++.++++++|++.++|+++..|.+.......+++++|.+++||++++
T Consensus 405 ~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~Ge~l~ 484 (728)
T PLN03052 405 NLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGSTGEASS 484 (728)
T ss_pred CcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEecCCCCC
Confidence 99999998778899999999999874 46678999999999999999999999998875455678899999999999999
Q ss_pred HHHHHHHHHhCCCCceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCC--cceEEEecCC
Q 012774 321 KDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGK--EGELSIRGPT 398 (456)
Q Consensus 321 ~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~--~Gel~i~g~~ 398 (456)
++...++.+.++..++++.||+||++++..... .......+++|.|.+|++++|+| ++|++++.|+ .|||+++++.
T Consensus 485 ~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~-~~~~~~~g~~g~p~~g~~v~v~d-~~g~~v~~g~~~~GEL~v~~~~ 562 (728)
T PLN03052 485 VDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGS-LLQPQAFAAFSTPAMGCKLFILD-DSGNPYPDDAPCTGELALFPLM 562 (728)
T ss_pred HHHHHHHHHhcCCCCeEeeccChhhCcccccCC-CCCCCCCCccccCCCCceEEEEC-CCCCCCCCCCCceEEEEEeCCC
Confidence 999888888764468999999999976544321 11223467899999999999999 7899999885 6999998753
Q ss_pred c--ccccCCCccccccccC------CCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 399 I--MKGYVGEPEVTSATLL------PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 399 ~--~~gy~~~~~~~~~~~~------~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
. ..+|++++. ....|. ...||+|||++++|+||+++|+||.||+||++|+||+|.||
T Consensus 563 ~~~~~~~~~~~~-~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EI 627 (728)
T PLN03052 563 FGASSTLLNADH-YKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEI 627 (728)
T ss_pred CCCCccccCchh-hhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHH
Confidence 2 346666532 222231 12399999999999999999999999999999999999885
No 65
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.3e-57 Score=462.73 Aligned_cols=410 Identities=30% Similarity=0.447 Sum_probs=334.7
Q ss_pred CCCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHH
Q 012774 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (456)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~ 116 (456)
..++.+++...++.+ |+++|+++. ++++||.||.++++++|+.|.++.|+++||+|+++++|+++++++++||+
T Consensus 23 ~~~~~~~l~~~~~~~----p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~ 96 (562)
T PRK12492 23 YKSVVEVFERSCKKF----ADRPAFSNL--GVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGAL 96 (562)
T ss_pred cCcHHHHHHHHHHhC----CCCeeEecC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 368999999999988 999999876 78999999999999999999873499999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc----CCeEEE-Ec------------------------
Q 012774 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHRTIL-ID------------------------ 167 (456)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~~~~~~-~~------------------------ 167 (456)
++|++++|+++..+.+++.++++.++++++++++.....+... ....+. ..
T Consensus 97 ~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (562)
T PRK12492 97 RAGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMV 176 (562)
T ss_pred HcCeEEeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhccCceEEEeechhhccccccchhcccccccccccc
Confidence 9999999999999999999999999999999976543332211 111000 00
Q ss_pred -------CCchhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCC--C------CC
Q 012774 168 -------SPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP--K------RV 232 (456)
Q Consensus 168 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~--~------~~ 232 (456)
...++++..... ...........+++++++|||||||.||+|+++|+++..++......+. . ..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 255 (562)
T PRK12492 177 PAYHLPQAVPFKQALRQGR-GLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMK 255 (562)
T ss_pred cccCCcccccHHHHHhccC-CCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhccccccccccc
Confidence 000111111100 0011112345678999999999999999999999999776654433221 0 12
Q ss_pred C-CcEEEEecchhhHhhH-HHHHHHhHhcceEEEec-CCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCc
Q 012774 233 S-PAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSL 309 (456)
Q Consensus 233 ~-~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~l 309 (456)
. .+++++.+|++|.+++ ..++..+..|+..++.. .+++..+++.++++++|++.++|+++..+.+.......+++++
T Consensus 256 ~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l 335 (562)
T PRK12492 256 EGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSAL 335 (562)
T ss_pred CCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccce
Confidence 2 3577899999999998 44556677888766653 5689999999999999999999999999988766556678899
Q ss_pred eEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCc
Q 012774 310 ETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKE 389 (456)
Q Consensus 310 r~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~ 389 (456)
|.+++||+++++++.+.|.+.+ ++++++.||+||++.+++.... ......+++|+|+++++++|+| +++.+++.|+.
T Consensus 336 r~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~~G~p~~~~~v~ivd-~~~~~~~~g~~ 412 (562)
T PRK12492 336 KLTNSGGTALVKATAERWEQLT-GCTIVEGYGLTETSPVASTNPY-GELARLGTVGIPVPGTALKVID-DDGNELPLGER 412 (562)
T ss_pred eEEEeccccCCHHHHHHHHHHh-CCceeeccCccccCceeeecCC-cccccCCccceecCCCEEEEEC-CCCCCCCCCCc
Confidence 9999999999999999999887 8999999999999876654322 2233457899999999999999 67889999999
Q ss_pred ceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 390 GELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 390 Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
|||+++|+.++.||+++++.+.+.|..+|||+|||+|+++++|+++|.||.||+||++|++|+|.|+
T Consensus 413 Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eI 479 (562)
T PRK12492 413 GELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEI 479 (562)
T ss_pred eEEEEeCCccccccccCchhhhhcccCCCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHH
Confidence 9999999999999999999999988778999999999999999999999999999999999999874
No 66
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=5.9e-58 Score=502.58 Aligned_cols=411 Identities=26% Similarity=0.354 Sum_probs=347.2
Q ss_pred CCCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHH
Q 012774 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (456)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~ 116 (456)
..++.+.+.+.++++ |+++|+++. .++++||+||.++++++|+.|.+ ++++||+|+++++|+++++++++||+
T Consensus 614 ~~~l~~~~~~~a~~~----p~~~a~~~~-~~~~~Ty~el~~~~~~~a~~L~~--~~~~g~~V~i~~~n~~~~~~~~la~~ 686 (1146)
T PRK08633 614 LPPLAEAWIDTAKRN----WSRLAVADS-TGGELSYGKALTGALALARLLKR--ELKDEENVGILLPPSVAGALANLALL 686 (1146)
T ss_pred CCCHHHHHHHHHHhc----CCCcEEEcC-CCCcCcHHHHHHHHHHHHHHHHH--hCCCCCeEEEECCCchHHHHHHHHHH
Confidence 368899999999998 999999874 35799999999999999999987 47999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhc------c--CCeEEEEcCC-----c---hhhhhcccCC
Q 012774 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK------L--KHRTILIDSP-----E---FDSMTMSWNS 180 (456)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~------~--~~~~~~~~~~-----~---~~~~~~~~~~ 180 (456)
++|++++|+++..+.+++.++++++++++++++++..+.+.. . ..+++..+.. . +.........
T Consensus 687 ~~G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 766 (1146)
T PRK08633 687 LAGKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAKISKVDKLTALLAARLL 766 (1146)
T ss_pred HcCCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhccccchhHHHHHHHHhccC
Confidence 999999999999999999999999999999999877766542 1 1123332211 0 1111000000
Q ss_pred Cc----cccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHH-HHHHH
Q 012774 181 KH----ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLF-FCFRA 255 (456)
Q Consensus 181 ~~----~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~-~~~~~ 255 (456)
.. ........++++++++|||||||.||+|.++|+++..+.......+ ...++|++++.+|++|.+++. .++.+
T Consensus 767 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~l~~~p~~h~~g~~~~~~~~ 845 (1146)
T PRK08633 767 PARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVF-NLRNDDVILSSLPFFHSFGLTVTLWLP 845 (1146)
T ss_pred CHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhc-CCCCCCEEEEcCcHHHHHhHHHHHHHH
Confidence 00 0001345678999999999999999999999999998888776666 577889999999999999984 47889
Q ss_pred hHhcceEEEec-CCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCC
Q 012774 256 AALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKV 334 (456)
Q Consensus 256 l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~ 334 (456)
+..|+++++.+ .+++..+++.++++++|++.++|++++.+.+.....+.+++++|.+++||+++++++.+.+++.+ +.
T Consensus 846 l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-g~ 924 (1146)
T PRK08633 846 LLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADAFEEKF-GI 924 (1146)
T ss_pred HHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHHHHHHh-CC
Confidence 99999998876 47999999999999999999999999999887666666789999999999999999999999988 89
Q ss_pred ceEeccCccccccccccccCCC--------CCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCC
Q 012774 335 VLVQAYGLTESTAGVFRTVGPD--------ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGE 406 (456)
Q Consensus 335 ~i~~~yG~tE~~~~~~~~~~~~--------~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~ 406 (456)
++++.||+||++.+++...... ...+.+++|+|+||++++|+|+++++++++|+.|||+++|+.++.||+++
T Consensus 925 ~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~ 1004 (1146)
T PRK08633 925 RILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEELPPGEDGLILIGGPQVMKGYLGD 1004 (1146)
T ss_pred CeecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccCCCCCceEEEEcCCCccccccCC
Confidence 9999999999987665432111 11346789999999999999988899999999999999999999999999
Q ss_pred ccccccccCC---CCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 407 PEVTSATLLP---DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 407 ~~~~~~~~~~---~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
++.+.+.+.. +|||+|||+|++|+||++++.||.||+||++|++|+|.|+
T Consensus 1005 ~~~t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~ei 1057 (1146)
T PRK08633 1005 PEKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGAV 1057 (1146)
T ss_pred ccchHHHhhcCCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHHH
Confidence 9999888742 2899999999999999999999999999999999999874
No 67
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.4e-57 Score=462.90 Aligned_cols=406 Identities=26% Similarity=0.376 Sum_probs=324.8
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
.++.+++.+.++.+ |+++|+++. +.++||+||.++++++|+.|.+ +|+++||+|+|+++|++++++++|||++
T Consensus 14 ~~~~~~l~~~~~~~----p~~~Al~~~--~~~~Ty~eL~~~~~~~a~~L~~-~Gl~~gd~Vai~~~n~~e~~~~~la~~~ 86 (579)
T PLN03102 14 LTPITFLKRASECY----PNRTSIIYG--KTRFTWPQTYDRCCRLAASLIS-LNITKNDVVSVLAPNTPAMYEMHFAVPM 86 (579)
T ss_pred ccHHHHHHHHHHhC----CCCeEEEEC--CcEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHHHHh
Confidence 57888998888888 999999987 7899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-----------CCeEEEEcCC-----------chhhhh
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----------KHRTILIDSP-----------EFDSMT 175 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-----------~~~~~~~~~~-----------~~~~~~ 175 (456)
+|++++|+++..+.+++.++++.++++++|++++....+.+. ..+++.++.. ++..+.
T Consensus 87 ~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (579)
T PLN03102 87 AGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKRPSSEELDYECLI 166 (579)
T ss_pred cCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccCCcccccCHHHHH
Confidence 999999999999999999999999999999987765544321 1234444321 122221
Q ss_pred cccCCCccc---cccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHH
Q 012774 176 MSWNSKHEL---DRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFC 252 (456)
Q Consensus 176 ~~~~~~~~~---~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~ 252 (456)
......... .......+++++++|||||||.||+|+++|+++........... .....+++++.+|++|..++...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~~~~l~~~pl~h~~g~~~~ 245 (579)
T PLN03102 167 QRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGW-EMGTCPVYLWTLPMFHCNGWTFT 245 (579)
T ss_pred hccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhc-CCCCCCeEEecCChhhhcchhHH
Confidence 111100000 00123568899999999999999999999999754443333333 34567789999999999998777
Q ss_pred HHHhHhcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCC
Q 012774 253 FRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFP 332 (456)
Q Consensus 253 ~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~ 332 (456)
+.++..|+++++.+.+++..+++.|+++++|+++++|+++..|.+.........++++.+++||+++++.+.+.+++ +
T Consensus 246 ~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~-~- 323 (579)
T PLN03102 246 WGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPPPAALVKKVQR-L- 323 (579)
T ss_pred HHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCCCCHHHHHHHHH-c-
Confidence 88889999999998889999999999999999999999999998875444444567889999999999999999876 4
Q ss_pred CCceEeccCccccccccccccCCCC------------CCCCCccccccCCcEEEEEcCCCCCCCCC--CCcceEEEecCC
Q 012774 333 KVVLVQAYGLTESTAGVFRTVGPDE------------CRRWGSTGRLSAGLEAKIVDPETGDSLPP--GKEGELSIRGPT 398 (456)
Q Consensus 333 ~~~i~~~yG~tE~~~~~~~~~~~~~------------~~~~~~~G~~~~~~~~~i~d~~~~~~~~~--g~~Gel~i~g~~ 398 (456)
+.++++.||+||+++.+........ ....+..+.+++ .+++++.+.++.++. ++.|||+++|++
T Consensus 324 g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~v~i~~~~~~~~v~~~~~~~GEl~v~g~~ 401 (579)
T PLN03102 324 GFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLA--DVDVKNKETQESVPRDGKTMGEIVIKGSS 401 (579)
T ss_pred CCeEEeecCccccCccccccccccccccCCcccccccccCCCccccccc--ceEEeccccccccCCCCCCceEEEEECcc
Confidence 8899999999999865443211100 011223333444 455666566777764 367999999999
Q ss_pred cccccCCCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 399 IMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 399 ~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
++.||+++++.+.+.| .+|||+|||+|++|+||++++.||.||+||++|++|+|.|+
T Consensus 402 ~~~GY~~~~~~t~~~f-~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eI 458 (579)
T PLN03102 402 IMKGYLKNPKATSEAF-KHGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEV 458 (579)
T ss_pred hhhhhcCChhhhHhhh-ccCceecCceEEEcCCCeEEEEeccCcEEEECCEEECHHHH
Confidence 9999999999999988 58999999999999999999999999999999999999874
No 68
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-57 Score=459.09 Aligned_cols=407 Identities=33% Similarity=0.486 Sum_probs=353.2
Q ss_pred CCCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHH
Q 012774 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (456)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~ 116 (456)
+.+++++|.+.++.+ |+++|+.+. ++.+||+||.++++++|+.|.+ .|+++|++|+++++|+++++++++||+
T Consensus 5 ~~~l~~~l~~~~~~~----p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~g~~~~~~V~l~~~~~~~~~~~~la~~ 77 (521)
T PRK06187 5 PLTIGRILRHGARKH----PDKEAVYFD--GRRTTYAELDERVNRLANALRA-LGVKKGDRVAVFDWNSHEYLEAYFAVP 77 (521)
T ss_pred cCCHHHHHHHHHHHC----CCceEEEeC--CceEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 379999999999999 999999998 7789999999999999999998 899999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc----C-C-eEEEEcCC----------chhhhhcccCC
Q 012774 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----K-H-RTILIDSP----------EFDSMTMSWNS 180 (456)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~-~-~~~~~~~~----------~~~~~~~~~~~ 180 (456)
++|++++|+++..+.+++..+++.+++++++++.+..+.+.+. . . .++.++.. .+.++......
T Consensus 78 ~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (521)
T PRK06187 78 KIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAAPLAPEVGEYEELLAAASD 157 (521)
T ss_pred HcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCccccccccccccHHHHhhcCCc
Confidence 9999999999999999999999999999999998876665432 1 1 23333221 23333222111
Q ss_pred CccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcc
Q 012774 181 KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALME 260 (456)
Q Consensus 181 ~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~ 260 (456)
.........+++++++|||||||.||+|.++|+++..........+ +...++++++.+|++|.+++...+.++..|+
T Consensus 158 --~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~ 234 (521)
T PRK06187 158 --TFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWL-KLSRDDVYLVIVPMFHVHAWGLPYLALMAGA 234 (521)
T ss_pred --cCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhh-CCCCCCEEEEeCCchHHhhHHHHHHHHHhCC
Confidence 1122345668899999999999999999999999998887777766 7889999999999999999877777999999
Q ss_pred eEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEecc
Q 012774 261 TAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAY 340 (456)
Q Consensus 261 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~y 340 (456)
++++.+.+++..+++.++++++|+++++|+++..|.+.......+++++|.+++||+++++++++.+.+.+ ++++++.|
T Consensus 235 ~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~-~~~v~~~Y 313 (521)
T PRK06187 235 KQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREFKEKF-GIDLVQGY 313 (521)
T ss_pred EEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHHHh-Ccchheee
Confidence 99999888999999999999999999999999999998776667789999999999999999999999998 89999999
Q ss_pred CccccccccccccCCCC----CCCCCccccccCCcEEEEEcCCCCCCCCC--CCcceEEEecCCcccccCCCcccccccc
Q 012774 341 GLTESTAGVFRTVGPDE----CRRWGSTGRLSAGLEAKIVDPETGDSLPP--GKEGELSIRGPTIMKGYVGEPEVTSATL 414 (456)
Q Consensus 341 G~tE~~~~~~~~~~~~~----~~~~~~~G~~~~~~~~~i~d~~~~~~~~~--g~~Gel~i~g~~~~~gy~~~~~~~~~~~ 414 (456)
|+||++.++........ ....+++|+|++++.++|+| +++.+++. |+.|||+++|+.++.||+++++.+.+.|
T Consensus 314 G~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~ 392 (521)
T PRK06187 314 GMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVD-DDGDELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETI 392 (521)
T ss_pred ccCccCcccccCCcccccccccccCCccccccCCeEEEEEC-CCCCCCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHh
Confidence 99999876665332211 12567899999999999999 56778888 9999999999999999999999888888
Q ss_pred CCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 415 LPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 415 ~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
.++||+|||+++++++|++++.||.||+||++|.+|+|.++
T Consensus 393 -~~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~I 433 (521)
T PRK06187 393 -DGGWLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPREL 433 (521)
T ss_pred -hCCceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHH
Confidence 57899999999999999999999999999999999999763
No 69
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=5.5e-58 Score=476.70 Aligned_cols=401 Identities=21% Similarity=0.294 Sum_probs=324.0
Q ss_pred CCHHHHhhhcccCCCCCCCC-CcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDD-TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~-~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~ 116 (456)
.|+.+++.+.++++ |+ ++|+.+. ..+++||+||.++++++|+.|.+ . +++||+|+++++|++++++++|||+
T Consensus 204 ~t~~~~l~~~~~~~----p~~~~a~~~~-~~~~~Ty~el~~~~~~lA~~L~~-~-~~~gd~Val~~~n~~e~~~~~lA~~ 276 (718)
T PRK08043 204 ETLYEALLSAQYRY----GAGKPCIEDV-NFTPDSYRKLLKKTLFVGRILEK-Y-SVEGERIGLMLPNATISAAVIFGAS 276 (718)
T ss_pred CCHHHHHHHHHHHh----CCCCcceEcC-CCCcccHHHHHHHHHHHHHHHHH-h-cCCCceEEEEcCCcHHHHHHHHHHH
Confidence 68999999999999 87 5787753 24789999999999999999988 5 5999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHh--cc-----CCeEEEEcCC----chhhh-h-cccCCCcc
Q 012774 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLA--KL-----KHRTILIDSP----EFDSM-T-MSWNSKHE 183 (456)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~--~~-----~~~~~~~~~~----~~~~~-~-~~~~~~~~ 183 (456)
++|++++|+++.++.+++++++++++++++|++++..+... .. ....+.++.. .+... . ........
T Consensus 277 ~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (718)
T PRK08043 277 LRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKDDVTTADKLWIFAHLLMPR 356 (718)
T ss_pred HcCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEEEhhhhhhhcchhHHHHHHHHHhCCc
Confidence 99999999999999999999999999999999876654311 00 1122222211 00000 0 00000000
Q ss_pred ccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhH-HHHHHHhHhcceE
Q 012774 184 LDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETA 262 (456)
Q Consensus 184 ~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~ 262 (456)
.......++++++++|||||||.||+|+++|+++..........+ +...+|++++.+|++|.+++ ..++.++..|+++
T Consensus 357 ~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~-~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~v 435 (718)
T PRK08043 357 LAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIA-DFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEV 435 (718)
T ss_pred cccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhh-CCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEE
Confidence 111234568999999999999999999999999998877766655 67889999999999999998 5577899999999
Q ss_pred EEecC-CCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccC
Q 012774 263 VVMQR-FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYG 341 (456)
Q Consensus 263 ~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG 341 (456)
++.+. +++..+++.++++++|+++++|+++..+.+.. ...+++++|.+++||+++++++.+.|++.+ ++++++.||
T Consensus 436 v~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~-g~~l~~~YG 512 (718)
T PRK08043 436 FLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--NPYDFARLRYVVAGAEKLQESTKQLWQDKF-GLRILEGYG 512 (718)
T ss_pred EEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--CcccccceEEEEEeCccCCHHHHHHHHHHc-CCCeecccC
Confidence 98864 57788899999999999999999998876642 234678999999999999999999999988 899999999
Q ss_pred ccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCC--ccc-------ccc
Q 012774 342 LTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGE--PEV-------TSA 412 (456)
Q Consensus 342 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~--~~~-------~~~ 412 (456)
+||++.+++... ....+.+++|+|+||++++|+|+ ++. ++.|||+++|+.++.||+++ ++. +.+
T Consensus 513 ~TE~~~~~~~~~--~~~~~~~svG~p~pg~~~~i~d~-~~~----~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~ 585 (718)
T PRK08043 513 VTECAPVVSINV--PMAAKPGTVGRILPGMDARLLSV-PGI----EQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENAR 585 (718)
T ss_pred cccccceEEecC--CcccCCCCCCCcCCCCeeEEecC-CCC----CCceEEEEecCCccccccCCCCccccccccccccc
Confidence 999987665422 22335689999999999999984 332 45699999999999999983 432 222
Q ss_pred ccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 413 TLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 413 ~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
.+..+|||+|||+|++|+||++++.||.||+||++|++|+|.|+
T Consensus 586 ~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eI 629 (718)
T PRK08043 586 GEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMV 629 (718)
T ss_pred ccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHH
Confidence 23357999999999999999999999999999999999999874
No 70
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.8e-57 Score=467.57 Aligned_cols=409 Identities=20% Similarity=0.188 Sum_probs=325.6
Q ss_pred CCCCCHHHHhhhcccCCCCCCCCCcEEEECCC---CceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHH
Q 012774 35 DAPISAVDYVSSLRATLPWRDDDTVALINSVT---GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPIL 111 (456)
Q Consensus 35 ~~~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~---~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~ 111 (456)
++.+|+.+.+.++ .+ |+++|+++... .+++||+||.++++++|+.|.+ .|+++||+|+++++|+++++++
T Consensus 83 ~~~~n~~~~~~~~--~~----~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~gd~V~i~~~n~~e~v~~ 155 (655)
T PRK03584 83 GARLNYAENLLRH--RR----DDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRA-LGVGPGDRVAAYLPNIPETVVA 155 (655)
T ss_pred CCEeeHHHHhhcc--CC----CCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHH
Confidence 6668988888764 45 89999987522 2689999999999999999998 8999999999999999999999
Q ss_pred HHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchH---------HHHh----ccC--CeEEEEcCC-------
Q 012774 112 YFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV---------HKLA----KLK--HRTILIDSP------- 169 (456)
Q Consensus 112 ~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~----~~~--~~~~~~~~~------- 169 (456)
+|||+++|++++|+++.++.+++.++++.++++++|+++... ..+. ... ..+++++..
T Consensus 156 ~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 235 (655)
T PRK03584 156 MLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLGPAAAAA 235 (655)
T ss_pred HHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecCCCccccc
Confidence 999999999999999999999999999999999999976432 1111 111 123333211
Q ss_pred ------chhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHH-HHHhccCCCCCCCCcEEEEecc
Q 012774 170 ------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAA-VASSFASSPKRVSPAVMLFTMP 242 (456)
Q Consensus 170 ------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~-~~~~~~~~~~~~~~~~~~~~~p 242 (456)
.|+++..... ...........+++++++|||||||.||+|+++|++++.+ .......+ ....+|++++..+
T Consensus 236 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-~~~~~d~~~~~~~ 313 (655)
T PRK03584 236 ALPGALLWEDFLAPAE-AAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHC-DLGPGDRFFWYTT 313 (655)
T ss_pred ccCCcccHHHHhhccc-cCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhc-CCCCCCEEEEcCC
Confidence 1333322111 1111223346689999999999999999999999987644 33333344 5778899999999
Q ss_pred hhhHhhHHHHHHHhHhcceEEEecC----CCHHHHHHHHHHhcceeEEecHHHHHHHhcCCC--CCCCCCCCceEEEecC
Q 012774 243 YFHIYGLFFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVACGA 316 (456)
Q Consensus 243 ~~~~~g~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~v~~gG 316 (456)
+.|... ..++.++..|+++++.+. +++..+++.++++++|++.++|+++..+.+... ....+++++|.+++||
T Consensus 314 ~~~~~~-~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~G 392 (655)
T PRK03584 314 CGWMMW-NWLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIGSTG 392 (655)
T ss_pred chHHhH-HHHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEEEec
Confidence 888754 346688999999998752 589999999999999999999999999876432 2345689999999999
Q ss_pred CCCCHHHHHHHHHhC-CCCceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEe
Q 012774 317 APLGKDTIMAFASKF-PKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIR 395 (456)
Q Consensus 317 ~~~~~~~~~~~~~~~-~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~ 395 (456)
+++++++.+++.+.+ +++.+.+.||+||++...... ........+++|.|.+|++++|+| ++++++ .|+.|||+|+
T Consensus 393 e~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~-~~~~~~~~g~~g~p~~g~~~~ivd-~~g~~~-~g~~GeL~v~ 469 (655)
T PRK03584 393 SPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGG-NPLLPVYRGEIQCRGLGMAVEAWD-EDGRPV-VGEVGELVCT 469 (655)
T ss_pred CCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccC-CCCCCcCCCccCCCcCCceeEEEC-CCCCCC-CCCceEEEEc
Confidence 999999999999988 468899999999986543321 112233568899999999999999 678888 7999999999
Q ss_pred cC--CcccccCCCccccc--ccc-C-CCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 396 GP--TIMKGYVGEPEVTS--ATL-L-PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 396 g~--~~~~gy~~~~~~~~--~~~-~-~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
|+ +++.||+++++.+. ..+ . .+|||+|||+|++|+||+++|+||.||+||++|++|+|.||
T Consensus 470 gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EI 536 (655)
T PRK03584 470 KPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEI 536 (655)
T ss_pred cCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHHH
Confidence 96 78999999987543 111 1 15789999999999999999999999999999999999885
No 71
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=4.8e-58 Score=541.40 Aligned_cols=405 Identities=20% Similarity=0.299 Sum_probs=349.4
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
.+++++|.+.++++ |+++|+++. ++.+||+||.++++++|+.|.+ .|+++|++|+++++++++++++++||++
T Consensus 1574 ~~~~~~~~~~a~~~----p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~-~Gv~~~~~V~l~~~~s~~~vv~~lavlk 1646 (3956)
T PRK12467 1574 RLVHQLIEDQAAAT----PEAVALVFG--EQELTYGELNRRANRLAHRLIA-LGVGPEVLVGIAVERSLEMVVGLLAILK 1646 (3956)
T ss_pred ccHHHHHHHHHHhC----CCCeEEEeC--CcEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEccCCHHHHHHHHHhhc
Confidence 58999999999999 999999997 8899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-CCeEEEEcCCchhhhhcccCCCccccccCCCCCCEEE
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 196 (456)
+|++++|++|.++.+++.++++++++++++++......+... ...++.++... ...... ..........+++++|
T Consensus 1647 aG~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~ay 1722 (3956)
T PRK12467 1647 AGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARLPLPDGLRSLVLDQED--DWLEGY--SDSNPAVNLAPQNLAY 1722 (3956)
T ss_pred cCceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCccccCCcEEEecccc--chhccC--CCCCCCCCCCCcCcEE
Confidence 999999999999999999999999999999988766554321 23344443221 110111 1111223456789999
Q ss_pred EEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEecC---CCHHHH
Q 012774 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR---FDLKMM 273 (456)
Q Consensus 197 i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~---~~~~~~ 273 (456)
++|||||||.||||+++|+++.+.+......+ +...+++++...|+.|..++..++.++..|+++++.+. .++..+
T Consensus 1723 iiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~lvi~~~~~~~~~~~l 1801 (3956)
T PRK12467 1723 VIYTSGSTGRPKGAGNRHGALVNRLCATQEAY-QLSAADVVLQFTSFAFDVSVWELFWPLINGARLVIAPPGAHRDPEQL 1801 (3956)
T ss_pred EEECCCcCCCCCEEEEcCHHHHHHHHHHHHhc-CCCcccEEEEecCccHHHHHHHHHHHHhCCCEEEEcChhhcCCHHHH
Confidence 99999999999999999999999888877777 67889999999999999998889999999999999863 589999
Q ss_pred HHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCcccccccccccc
Q 012774 274 LKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTV 353 (456)
Q Consensus 274 ~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~ 353 (456)
++.|+++++|++.++|+++..|.+... ....++++|.+++|||++++++.+.|.+.+++..++|.||+||++..++...
T Consensus 1802 ~~~i~~~~vt~~~~~Ps~~~~l~~~~~-~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~~ 1880 (3956)
T PRK12467 1802 IQLIERQQVTTLHFVPSMLQQLLQMDE-QVEHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFNLYGPTETAVDVTHWT 1880 (3956)
T ss_pred HHHHHHcCCeEEECCHHHHHHHHhhcc-ccccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEeCccCCcCEEeEEEEe
Confidence 999999999999999999999987422 2345789999999999999999999999888889999999999987665432
Q ss_pred CC---CCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCC-------CCeeecc
Q 012774 354 GP---DECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP-------DGWMRTG 423 (456)
Q Consensus 354 ~~---~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~-------~g~~~TG 423 (456)
.. .......++|+|+++++++|+| +.+++++.|..|||+|+|+++++||+++|+.|++.|.. ++||+||
T Consensus 1881 ~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~vp~G~~GEl~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTG 1959 (3956)
T PRK12467 1881 CRRKDLEGRDSVPIGQPIANLSTYILD-ASLNPVPIGVAGELYLGGVGLARGYLNRPALTAERFVADPFGTVGSRLYRTG 1959 (3956)
T ss_pred ccccccccCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEeccccccccccCChhhhhhhCcCCCCCCCCccceecc
Confidence 21 1122346899999999999999 78999999999999999999999999999999998853 3499999
Q ss_pred ceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 424 DLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 424 Dl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
|+|++++||.|+|+||.||+||++|+||+|.||
T Consensus 1960 Dl~~~~~dG~l~~~GR~D~qVki~G~rIel~eI 1992 (3956)
T PRK12467 1960 DLARYRADGVIEYLGRIDHQVKIRGFRIELGEI 1992 (3956)
T ss_pred ceEEECCCCCEEEecccCceEEeCeEEechHHH
Confidence 999999999999999999999999999999875
No 72
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.1e-57 Score=456.70 Aligned_cols=397 Identities=21% Similarity=0.268 Sum_probs=331.9
Q ss_pred CCCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHH
Q 012774 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (456)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~ 116 (456)
..|+.+.+.+.+..+ |+++|+++. +..+||+||.++++++|+.|.+ .|+++||+|+++++|++++++++|||+
T Consensus 34 ~~~~~~~~~~~a~~~----p~~~a~~~~--~~~lTy~el~~~~~~la~~L~~-~gi~~g~~V~i~~~~~~~~~~~~la~~ 106 (516)
T PRK13383 34 GTNPYTLLAVTAARW----PGRTAIIDD--DGALSYRELQRATESLARRLTR-DGVAPGRAVGVMCRNGRGFVTAVFAVG 106 (516)
T ss_pred CCcHHHHHHHHHHHC----CCCcEEEeC--CCcEeHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 379999999999988 999999987 6799999999999999999998 899999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhccCCeEEEEcCCchhhhhcccCCCccccccCCCCCCEEE
Q 012774 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (456)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 196 (456)
++|++++|+++.++.+++.++++.+++++++++++....+......++.++...... .. ........++.++
T Consensus 107 ~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~p~~~~~~~~ 178 (516)
T PRK13383 107 LLGADVVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGADDAVAVIDPATAGA--EE------SGGRPAVAAPGRI 178 (516)
T ss_pred HhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhhcceEEeccchhhh--hc------CCCCCCCCCCCcE
Confidence 999999999999999999999999999999999887766654433344333211100 00 0011123456678
Q ss_pred EEcCCCCCCCCchhcccHHHHH--HHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEecCCCHHHHH
Q 012774 197 IMYSSGTTGRVKGVMLTHRNLT--AAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMML 274 (456)
Q Consensus 197 i~~TSGtTG~PK~V~~th~~l~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~ 274 (456)
++|||||||.||+|.++|.... .......... ....+++++..+|++|.+++..++.++..|+++++...++++.++
T Consensus 179 il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~ 257 (516)
T PRK13383 179 VLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRT-RLRTGSRISVAMPMFHGLGLGMLMLTIALGGTVLTHRHFDAEAAL 257 (516)
T ss_pred EEECCCCCCCCCeeeecchhhhhhhhHHhHHhhh-ccCCCCeEEEecCCcchhhHHHHHHHHhcCCEEEECCCCCHHHHH
Confidence 9999999999999999997432 1111222233 567889999999999999998788899999999998889999999
Q ss_pred HHHHHhcceeEEecHHHHHHHhcCCCC--CCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccc
Q 012774 275 KAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRT 352 (456)
Q Consensus 275 ~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~ 352 (456)
+.++++++|.+.++|+++..+...... ....++++|.+++||++++++++++|.+.+ +..+++.||+||++..+...
T Consensus 258 ~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-g~~v~~~YG~tE~~~~~~~~ 336 (516)
T PRK13383 258 AQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTY-GDILYNGYGSTEVGIGALAT 336 (516)
T ss_pred HHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHc-Cchhhhcccccccccceecc
Confidence 999999999999999999999875432 233578999999999999999999999998 78899999999998665432
Q ss_pred cCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCC
Q 012774 353 VGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDG 432 (456)
Q Consensus 353 ~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg 432 (456)
. .......+++|+|+++++++|+| ++++++++|+.|||+++|+.++.||++++. ..+ .+|||+|||+|++|++|
T Consensus 337 ~-~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~Y~~~~~---~~~-~~g~~~TGDl~~~d~~G 410 (516)
T PRK13383 337 P-ADLRDAPETVGKPVAGCPVRILD-RNNRPVGPRVTGRIFVGGELAGTRYTDGGG---KAV-VDGMTSTGDMGYLDNAG 410 (516)
T ss_pred c-cccccCCCcccCCCCCcEEEEEC-CCCCCCCCCCceEEEEecCcccccccCCch---hhe-ecCceecceeEEEcCCc
Confidence 2 12223457899999999999999 678999999999999999999999998754 223 47999999999999999
Q ss_pred cEEEecccccceeeCCeeecCCCC
Q 012774 433 FLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 433 ~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
++++.||.||+||++|++|+|.|+
T Consensus 411 ~l~i~GR~~~~i~~~G~~v~~~ei 434 (516)
T PRK13383 411 RLFIVGREDDMIISGGENVYPRAV 434 (516)
T ss_pred cEEEeccccceEEECCEEECHHHH
Confidence 999999999999999999999764
No 73
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=2.8e-57 Score=456.43 Aligned_cols=404 Identities=26% Similarity=0.375 Sum_probs=342.8
Q ss_pred CHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHh
Q 012774 39 SAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSL 118 (456)
Q Consensus 39 ~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~ 118 (456)
++++.+.+.++++ |+++|+.+. ++++||+||.+++.++|+.|++ .|+++|++|+++++|+++++++++||+++
T Consensus 1 ~~~~~~~~~~~~~----p~~~a~~~~--~~~~ty~~l~~~v~~~a~~l~~-~g~~~~~~V~i~~~n~~~~~~~~lA~~~~ 73 (515)
T TIGR03098 1 LLHHLLEDAAARL----PDATALVHH--DRTLTYAALSERVLALASGLRG-LGLARGERVAIYLDKRLETVTAMFGAALA 73 (515)
T ss_pred CHHHHHHHHHHHC----CCCeEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHhc
Confidence 3678888888888 999999987 7899999999999999999998 89999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-----C-CeEEEEcCC-----------chhhhhcccCCC
Q 012774 119 GVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----K-HRTILIDSP-----------EFDSMTMSWNSK 181 (456)
Q Consensus 119 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-----~-~~~~~~~~~-----------~~~~~~~~~~~~ 181 (456)
|++++|+++..+.+++..+++.++++++++++.....+... . ..++.++.. .|+.+.....
T Consensus 74 G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 151 (515)
T TIGR03098 74 GGVFVPINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHASEGGGESPSWPKLLALGD-- 151 (515)
T ss_pred CEEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCcccccCCccccccHHHhhcccc--
Confidence 99999999999999999999999999999987665543221 1 123333321 2333222111
Q ss_pred ccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcce
Q 012774 182 HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMET 261 (456)
Q Consensus 182 ~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~ 261 (456)
.........++.++++|||||||.||+|.+||+++...+......+ ....++++++.+|++|.+++..++.++..|++
T Consensus 152 -~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~ 229 (515)
T TIGR03098 152 -ADPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYL-ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGAT 229 (515)
T ss_pred -ccccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHh-CCCcccEEEEECchhhHhHHHHHHHHHHcCCE
Confidence 1112234557899999999999999999999999998887776666 57888999999999999999888999999999
Q ss_pred EEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccC
Q 012774 262 AVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYG 341 (456)
Q Consensus 262 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG 341 (456)
+++.+.++++.+++.++++++|++.++|+++..|.+... ....++++|.+++||+++++++.+.+++.+++..+++.||
T Consensus 230 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG 308 (515)
T TIGR03098 230 VVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDW-PESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYG 308 (515)
T ss_pred EEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhccc-CCCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeec
Confidence 999988999999999999999999999999999987532 2245789999999999999999999999998899999999
Q ss_pred ccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCC-----
Q 012774 342 LTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP----- 416 (456)
Q Consensus 342 ~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~----- 416 (456)
+||++...... ......+.+++|+|+++++++|++ ++++.++.|+.|||+++|+.++.||+++++.+.+.|..
T Consensus 309 ~tE~~~~~~~~-~~~~~~~~~~vG~~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~ 386 (515)
T TIGR03098 309 LTEAFRSTYLP-PEEVDRRPDSIGKAIPNAEVLVLR-EDGSECAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRP 386 (515)
T ss_pred cccccceEecc-cccccCCCCCcceecCCCEEEEEC-CCCCCCCCCCceEEEEcCchhhccccCCchhhhhhhhccCCcc
Confidence 99987644331 222234568999999999999999 67889999999999999999999999999888766543
Q ss_pred ------CCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 417 ------DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 417 ------~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
++||+|||+|++++||++++.||.||+||++|++|+|.|+
T Consensus 387 ~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~ei 432 (515)
T TIGR03098 387 GELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEV 432 (515)
T ss_pred ccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHH
Confidence 3489999999999999999999999999999999999874
No 74
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=5e-57 Score=454.57 Aligned_cols=408 Identities=27% Similarity=0.379 Sum_probs=338.3
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECC---CCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSV---TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~---~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la 114 (456)
.++++++.+.++++ |+++|+++.+ +.+.+||.||.++++++|+.|.+ +|+++||+|+++++|+++++++++|
T Consensus 7 ~~l~~~~~~~a~~~----p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~-~g~~~~~~v~i~~~n~~~~~~~~la 81 (517)
T PRK08008 7 QHLRQMWDDLADVY----GHKTALIFESSGGVVRRYSYLELNEEINRTANLFYS-LGIRKGDKVALHLDNCPEFIFCWFG 81 (517)
T ss_pred ccHHHHHHHHHHHC----CCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 58999999999999 9999998753 23789999999999999999998 8999999999999999999999999
Q ss_pred HHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc------CC-eEEEEcC--------CchhhhhcccC
Q 012774 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL------KH-RTILIDS--------PEFDSMTMSWN 179 (456)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~------~~-~~~~~~~--------~~~~~~~~~~~ 179 (456)
|+++|++++++++..+.+++.++++.+++++++++++....+.+. .. .++..+. .+++.......
T Consensus 82 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (517)
T PRK08008 82 LAKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPADDGVSSFTQLKAQQP 161 (517)
T ss_pred HHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCcccccccCHHHHhccCC
Confidence 999999999999999999999999999999999998766544321 11 1222221 11222211111
Q ss_pred CCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhH-HHHHHHhHh
Q 012774 180 SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAAL 258 (456)
Q Consensus 180 ~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~ 258 (456)
.. .........+++++++|||||||.||+|+++|+++........... ....++++++.+|++|..+. ..++.++..
T Consensus 162 ~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~ 239 (517)
T PRK08008 162 AT-LCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQC-ALRDDDVYLTVMPAFHIDCQCTAAMAAFSA 239 (517)
T ss_pred cc-ccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhc-CCCCCCeEEEecCcHHHHHHHHHHHHHHhc
Confidence 00 1112234568999999999999999999999999986543322222 45778999999999998766 567788999
Q ss_pred cceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEe
Q 012774 259 METAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (456)
Q Consensus 259 G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~ 338 (456)
|+++++.+.+++..+++.++++++|++.++|++++.++...........++|.+.++ .+++++....+.+.+ +.++++
T Consensus 240 G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~-~~~~~~ 317 (517)
T PRK08008 240 GATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFY-LNLSDQEKDAFEERF-GVRLLT 317 (517)
T ss_pred CcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEe-cCCCHHHHHHHHHHh-CCeEEe
Confidence 999999999999999999999999999999999999887654433345678887775 478899999999987 899999
Q ss_pred ccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEec---CCcccccCCCccccccccC
Q 012774 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRG---PTIMKGYVGEPEVTSATLL 415 (456)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g---~~~~~gy~~~~~~~~~~~~ 415 (456)
.||+||++..+.... ........++|.|+++++++|+| ++++.++.|+.|||+++| ++++.||+++++.+.+.|.
T Consensus 318 ~YG~tE~~~~~~~~~-~~~~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~ 395 (517)
T PRK08008 318 SYGMTETIVGIIGDR-PGDKRRWPSIGRPGFCYEAEIRD-DHNRPLPAGEIGEICIKGVPGKTIFKEYYLDPKATAKVLE 395 (517)
T ss_pred eccccccccccccCC-ccccccCCccccCCCCcEEEEEC-CCCCCCCCCCcceEEEeCCCCcchhhhHhCChHHHhhccc
Confidence 999999986555432 22334567899999999999999 778999999999999998 6899999999999999998
Q ss_pred CCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 416 PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 416 ~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
.+|||+|||+|++|+||++++.||.||+||++|++|+|.|+
T Consensus 396 ~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~i 436 (517)
T PRK08008 396 ADGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVEL 436 (517)
T ss_pred CCCCeeccceEEECCCCcEEEeecccceEEeCCEEECHHHH
Confidence 89999999999999999999999999999999999999764
No 75
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.6e-57 Score=457.48 Aligned_cols=413 Identities=27% Similarity=0.396 Sum_probs=340.1
Q ss_pred CCCCCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHH
Q 012774 35 DAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (456)
Q Consensus 35 ~~~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la 114 (456)
....++.+++.+.++.+ |+++|+.+. ++.+||.||.+++.++|..|.+ .|+++|++|+++++|+++++++++|
T Consensus 30 ~~~~~l~~~l~~~a~~~----p~~~al~~~--~~~~Ty~~l~~~~~~la~~L~~-~g~~~g~~V~i~~~n~~~~~~~~lA 102 (567)
T PRK06178 30 HGERPLTEYLRAWARER----PQRPAIIFY--GHVITYAELDELSDRFAALLRQ-RGVGAGDRVAVFLPNCPQFHIVFFG 102 (567)
T ss_pred cCcccHHHHHHHHHHHC----CCceEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCcHHHHHHHH
Confidence 34479999999999998 999999987 7899999999999999999998 8999999999999999999999999
Q ss_pred HHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc----CCeEEE-EcCCc-------------------
Q 012774 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHRTIL-IDSPE------------------- 170 (456)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~~~~~~-~~~~~------------------- 170 (456)
|+++|++++|++|..+.+++.++++.++++++++++...+.+.+. ....+. .....
T Consensus 103 ~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (567)
T PRK06178 103 ILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAETSLRHVIVTSLADVLPAEPTLPLPDSLRAPRL 182 (567)
T ss_pred HHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccCCcceEEEeccccccccccccccccccccccc
Confidence 999999999999999999999999999999999998877655432 111221 11000
Q ss_pred ----hhhhhcccC-CCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhh
Q 012774 171 ----FDSMTMSWN-SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFH 245 (456)
Q Consensus 171 ----~~~~~~~~~-~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 245 (456)
+.++..... ............+++++++|||||||.||+|++||+++...............+++++++.+|++|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~ 262 (567)
T PRK06178 183 AAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGEDSVFLSFLPEFW 262 (567)
T ss_pred cccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCCCcEEEEecchHH
Confidence 000000000 000111223456899999999999999999999999998766544333224678899999999999
Q ss_pred HhhH-HHHHHHhHhcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEec--CCCCCHH
Q 012774 246 IYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACG--AAPLGKD 322 (456)
Q Consensus 246 ~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~g--G~~~~~~ 322 (456)
.+|+ ..++.++..|+++++.+.+++..++..++++++|++.++|..+..+++.......+++++|.+..+ |+.++++
T Consensus 263 ~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~l~~~~~~~~~~~~~~~ 342 (567)
T PRK06178 263 IAGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSSLRQVRVVSFVKKLNPD 342 (567)
T ss_pred HHHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcchheeeeeccccccCCHH
Confidence 9998 567888999999999999999999999999999999999999999987765555667788886544 5899999
Q ss_pred HHHHHHHhCCCCceE-eccCccccccccccccCCC-----CCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEec
Q 012774 323 TIMAFASKFPKVVLV-QAYGLTESTAGVFRTVGPD-----ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRG 396 (456)
Q Consensus 323 ~~~~~~~~~~~~~i~-~~yG~tE~~~~~~~~~~~~-----~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g 396 (456)
+.+.|++.+ +..++ +.||+||++..+....... .....+++|+|+||++++|+|+++++.++.|+.|||+++|
T Consensus 343 ~~~~~~~~~-g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~~~~~~~g~~Gel~v~g 421 (567)
T PRK06178 343 YRQRWRALT-GSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFETGELLPLGAEGEIVVRT 421 (567)
T ss_pred HHHHHHHHh-CCcccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcCCCCCcCCCCCceEEEEEC
Confidence 999999988 45554 5799999876544321111 1223467999999999999998889999999999999999
Q ss_pred CCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 397 PTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 397 ~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+.++.||+++++.+...| .+|||+|||+|++++||++++.||.+|+||++|++|+|.|+
T Consensus 422 ~~v~~gY~~~~~~~~~~~-~dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~ei 480 (567)
T PRK06178 422 PSLLKGYWNKPEATAEAL-RDGWLHTGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSEV 480 (567)
T ss_pred CcccccccCChhhhhhcc-cCCceeecceEEEecCCeEEEEecccccEEECCEEECHHHH
Confidence 999999999999998887 58999999999999999999999999999999999999764
No 76
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.6e-57 Score=455.96 Aligned_cols=398 Identities=20% Similarity=0.231 Sum_probs=327.4
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCC-CCCCEEEEEcCCCCcHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRL-SKNDTAFVLSTNSIEIPILYFSLL 116 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi-~~gd~V~l~~~~~~~~~~~~la~~ 116 (456)
.|+.+++.+++ . |+++|+++. +..+||+||.++++++|..|.+ .|+ ++||+|+++++|+++++++++||+
T Consensus 3 ~~~~~~l~~~~--~----p~~~Al~~~--~~~lTy~el~~~~~~la~~L~~-~g~~~~~~~V~i~~~n~~~~v~~~lA~~ 73 (540)
T PRK13388 3 DTIAQLLRDRA--G----DDTIAVRYG--DRTWTWREVLAEAAARAAALIA-LADPDRPLHVGVLLGNTPEMLFWLAAAA 73 (540)
T ss_pred hhHHHHHHhhc--c----CCceEEEEC--CceeeHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCCCcHHHHHHHHHH
Confidence 37888888764 4 899999987 7899999999999999999998 899 799999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc---CCeEEEEcCCchhhhhcccCCCccccccCCCCCC
Q 012774 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL---KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSD 193 (456)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (456)
++|++++|++|.++.+++.++++.++++++|++++....+.+. ..+++.++...+.++...... ..+.....+++
T Consensus 74 ~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 151 (540)
T PRK13388 74 LGGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLDLPGVRVLDVDTPAYAELVAAAGA--LTPHREVDAMD 151 (540)
T ss_pred hCCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhcccCceEEEccchhhhhhhccccC--cCCCCCCCCCC
Confidence 9999999999999999999999999999999998776655443 234454444444443321111 11112356789
Q ss_pred EEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHH-HHHHhHhcceEEEecCCCHHH
Q 012774 194 VAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFF-CFRAAALMETAVVMQRFDLKM 272 (456)
Q Consensus 194 ~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~l~~G~~~~~~~~~~~~~ 272 (456)
+++++|||||||.||+|.++|+++..........+ ....+|++++.+|++|.+++.. ++.++..|+++++.+.+++..
T Consensus 152 ~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~ 230 (540)
T PRK13388 152 PFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERF-GLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVALPAKFSASG 230 (540)
T ss_pred eEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHh-CCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEECCCCCHHH
Confidence 99999999999999999999999988777766666 6788999999999999998854 446788999999888889999
Q ss_pred HHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccc
Q 012774 273 MLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRT 352 (456)
Q Consensus 273 ~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~ 352 (456)
+++.++++++|++..+|..+..++...........++|.+ . |++++++..+.+.+.+ +.++++.||+||++.++...
T Consensus 231 ~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~~~-~-G~~~~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~ 307 (540)
T PRK13388 231 FLDDVRRYGATYFNYVGKPLAYILATPERPDDADNPLRVA-F-GNEASPRDIAEFSRRF-GCQVEDGYGSSEGAVIVVRE 307 (540)
T ss_pred HHHHHHHhCCeEEEehHHHHHHHHhCCCCccccccceEEE-E-CCCCCHHHHHHHHHHh-CCceecccccccccceeecC
Confidence 9999999999999999999998887643322223456643 3 5667888889998888 78999999999998766532
Q ss_pred cCCCCCCCCCccccccCCcEEE-----------EEcCCCCCCC-CCCCcceEEEe-cCCcccccCCCccccccccCCCCe
Q 012774 353 VGPDECRRWGSTGRLSAGLEAK-----------IVDPETGDSL-PPGKEGELSIR-GPTIMKGYVGEPEVTSATLLPDGW 419 (456)
Q Consensus 353 ~~~~~~~~~~~~G~~~~~~~~~-----------i~d~~~~~~~-~~g~~Gel~i~-g~~~~~gy~~~~~~~~~~~~~~g~ 419 (456)
. ....+++|+|++++++. ++| ++|+.+ +.+..|||+++ |+.++.||+++++.+.+.| .+||
T Consensus 308 ~----~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d-~~g~~~~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~-~~g~ 381 (540)
T PRK13388 308 P----GTPPGSIGRGAPGVAIYNPETLTECAVARFD-AHGALLNADEAIGELVNTAGAGFFEGYYNNPEATAERM-RHGM 381 (540)
T ss_pred C----CCCCCCCCCCCCCcEEEcCCCCccccceecc-CccccccCCCcceEEEEecCCcccccccCChHHHHHHh-hcCc
Confidence 1 23457899999997653 333 344444 34678999998 9999999999999999888 5899
Q ss_pred eeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 420 MRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 420 ~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
|+|||+|++|+||++++.||.||+||++|++|+|.||
T Consensus 382 ~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eI 418 (540)
T PRK13388 382 YWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPI 418 (540)
T ss_pred eeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHH
Confidence 9999999999999999999999999999999999874
No 77
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.5e-57 Score=459.08 Aligned_cols=408 Identities=23% Similarity=0.287 Sum_probs=337.9
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
.++.++|.+.++.+ |+++|+++. ++++||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||++
T Consensus 10 ~~l~~~l~~~a~~~----p~~~a~~~~--~~~~Ty~~L~~~~~~~a~~L~~-~g~~~g~~V~i~~~n~~~~~~~~la~~~ 82 (540)
T PRK06164 10 DTLASLLDAHARAR----PDAVALIDE--DRPLSRAELRALVDRLAAWLAA-QGVRRGDRVAVWLPNCIEWVVLFLACAR 82 (540)
T ss_pred CCHHHHHHHHHHhC----CCCeEEecC--CCcccHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCcHHHHHHHHHHHH
Confidence 68999999999999 999999976 7899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchH-----HHHhcc------CC-eEEEEcCCc----------hhhhh
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVV-----HKLAKL------KH-RTILIDSPE----------FDSMT 175 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~------~~-~~~~~~~~~----------~~~~~ 175 (456)
+|++++|+++..+.+++.++++.+++++++++++.. ..+... .. .++.++... +....
T Consensus 83 ~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (540)
T PRK06164 83 LGATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATPAPAPGARVQLF 162 (540)
T ss_pred hCcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCCCCCcccccccc
Confidence 999999999999999999999999999999987642 112111 11 222332100 00000
Q ss_pred cccC-CCcc-ccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHH
Q 012774 176 MSWN-SKHE-LDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCF 253 (456)
Q Consensus 176 ~~~~-~~~~-~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~ 253 (456)
.... .... ........+++++++|||||||.||+|+++|+++..+.......+ +...++++++.+|++|.+|+..++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~g~~~~~ 241 (540)
T PRK06164 163 ALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY-GYDPGAVLLAALPFCGVFGFSTLL 241 (540)
T ss_pred cccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc-CCCCCCEEEEcCCchhHHHHHHHH
Confidence 0000 0000 001123467899999999999999999999999998888777776 677899999999999999998889
Q ss_pred HHhHhcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecC-CCCCHHHHHHHHHhCC
Q 012774 254 RAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGA-APLGKDTIMAFASKFP 332 (456)
Q Consensus 254 ~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG-~~~~~~~~~~~~~~~~ 332 (456)
.++..|+++++.+.+++..+++.|+++++|+++++|+++..+.+. .....+++++|.+..+| .+...++.+++.+.
T Consensus 242 ~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-- 318 (540)
T PRK06164 242 GALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDT-AGERADFPSARLFGFASFAPALGELAALARAR-- 318 (540)
T ss_pred HHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHh-hcccCCCcceeeeeeccCCcchHHHHHHHhhc--
Confidence 999999999999999999999999999999999999999999887 23445688999887776 45556666766665
Q ss_pred CCceEeccCccccccccccccCC-CCCCCCCcccccc-CCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCcccc
Q 012774 333 KVVLVQAYGLTESTAGVFRTVGP-DECRRWGSTGRLS-AGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVT 410 (456)
Q Consensus 333 ~~~i~~~yG~tE~~~~~~~~~~~-~~~~~~~~~G~~~-~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~ 410 (456)
++++++.||+||++.+++..... .......+.|.++ +++.++|+|++++.+++.|+.|||+++|++++.||+++++.+
T Consensus 319 ~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t 398 (540)
T PRK06164 319 GVPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGALLPDGESGEIEIRAPSLMRGYLDNPDAT 398 (540)
T ss_pred CCceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcCCCCCCeeEEEEecccccccccCCchhh
Confidence 78999999999998765543221 1122334668876 899999999888999999999999999999999999999999
Q ss_pred ccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 411 SATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 411 ~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
.+.|..+|||+|||+|++|+||++++.||.||+||++|++|+|.|+
T Consensus 399 ~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eI 444 (540)
T PRK06164 399 ARALTDDGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEI 444 (540)
T ss_pred hhcccCCCceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHH
Confidence 9999889999999999999999999999999999999999999874
No 78
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=6.9e-58 Score=460.62 Aligned_cols=399 Identities=21% Similarity=0.281 Sum_probs=312.0
Q ss_pred CC-HHHHhhhcccCCCCCCCCCcEEEECCCC--ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHH
Q 012774 38 IS-AVDYVSSLRATLPWRDDDTVALINSVTG--LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (456)
Q Consensus 38 ~~-~~~~l~~~~~~~~~~~p~~~A~~~~~~~--~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la 114 (456)
|| +.+.|.+.++++ |+++|+++.+.+ +++||+||.++++++|+.|.+ . ++||+|+|+++|+++++++++|
T Consensus 1 ~~~~~~~l~~~~~~~----~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~-~--~~g~~V~l~~~~~~e~~~~~la 73 (525)
T PRK05851 1 MNELAAALSDAMTAS----GRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLD-R--DRPGAVGLVGEPTVELVAAIQG 73 (525)
T ss_pred CchHHHHHHHHhcCC----CCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHh-c--CCCCeEEEEcCCCHHHHHHHHH
Confidence 45 788899999999 999999987422 789999999999999999998 5 7999999999999999999999
Q ss_pred HHHhCCeEecCCCC-------CCHHHHHHHhhhcCCeEEEEccchHHHHhccCCeEEEEcCCchhhhhcccCCCcccccc
Q 012774 115 LLSLGVIISPANPV-------NTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRA 187 (456)
Q Consensus 115 ~~~~G~~~v~l~~~-------~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (456)
|+++|+++++++.. ...+++.++++.++++++|+++.....+......+ .+. ++........ .....
T Consensus 74 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~---~~~~~ 147 (525)
T PRK05851 74 AWLAGAAVSILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSSV-TVH--DLATAAHTNR---SASLT 147 (525)
T ss_pred HHHcCCCCcCCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhccc-ccc--cccccccccc---cccCC
Confidence 99999986543211 12345667789999999999877665543221111 111 1111000000 11112
Q ss_pred CCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCC-CCcEEEEecchhhHhhHHHHHHHhHhcceEEEec
Q 012774 188 KVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRV-SPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ 266 (456)
Q Consensus 188 ~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~ 266 (456)
...++++++++|||||||.||+|+++|+++...+......+ ... .+|++++++|++|.+++..++.++..|+++++.+
T Consensus 148 ~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~ 226 (525)
T PRK05851 148 PPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARV-GLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAP 226 (525)
T ss_pred CCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh-CCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcC
Confidence 24668999999999999999999999999998888776666 566 8899999999999999988889999999999876
Q ss_pred C--C--CHHHHHHHHHHhcceeEEecHHHHHHHhcCCC-CCCCCCCCceEEEecCCCCCHHHHHHHHHh---C--CCCce
Q 012774 267 R--F--DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS-TDGYDLSSLETVACGAAPLGKDTIMAFASK---F--PKVVL 336 (456)
Q Consensus 267 ~--~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~---~--~~~~i 336 (456)
. + ++..+++.++++++|++..+|.++..+.+... ....+++++|.+++||+++++++.++|.+. + +...+
T Consensus 227 ~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~ 306 (525)
T PRK05851 227 TTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCDGFERFATAMAPFGFDAGAA 306 (525)
T ss_pred HHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCHHHHHHHHHHHhhcCCChhhc
Confidence 2 3 67889999999999988655555555543221 223457899999999999999999999875 2 22459
Q ss_pred EeccCccccccccccccCC-----------C--CCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCccccc
Q 012774 337 VQAYGLTESTAGVFRTVGP-----------D--ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGY 403 (456)
Q Consensus 337 ~~~yG~tE~~~~~~~~~~~-----------~--~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy 403 (456)
++.||+||++..+...... + .....+++|+|++|++++|+|++.+..++.|+.|||+++|++++.||
T Consensus 307 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~GY 386 (525)
T PRK05851 307 APSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAGVAGREIGEIEIRGASMMSGY 386 (525)
T ss_pred ccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCccCCCCCeEEEEEecCchhhcc
Confidence 9999999997655432110 0 11234679999999999999965556789999999999999999999
Q ss_pred CCCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 404 VGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 404 ~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+++++.+ .+|||+|||+|+++ +|+++|+||.||+||++|+||+|.||
T Consensus 387 ~~~~~~~-----~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~~~G~~v~p~eI 433 (525)
T PRK05851 387 LGQAPID-----PDDWFPTGDLGYLV-DGGLVVCGRAKELITVAGRNIFPTEI 433 (525)
T ss_pred ccCCccC-----CCCceeccceEEEE-CCEEEEEeecCCEEEECCEEeCHHHH
Confidence 9988642 47899999999996 89999999999999999999999875
No 79
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=8.8e-58 Score=546.97 Aligned_cols=404 Identities=18% Similarity=0.268 Sum_probs=347.0
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
.++++++.+.++++ |+++|+++. ++++||+||.++++++|+.|.+ .|+++|++|+|+++++++++++++||++
T Consensus 2003 ~~~~~~~~~~a~~~----p~~~A~~~~--~~~lTy~eL~~~a~~lA~~L~~-~gv~~g~~V~l~~~~s~~~~~~~lAil~ 2075 (5163)
T PRK12316 2003 PGVHQRIAEQAARA----PEAIAVVFG--DQHLSYAELDSRANRLAHRLRA-RGVGPEVRVAIAAERSFELVVALLAVLK 2075 (5163)
T ss_pred CCHHHHHHHHHHhC----CCCeEEEcC--CCeEcHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHh
Confidence 58999999999999 999999987 7899999999999999999999 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-CCeEEEEcCCchhhhhcccCCCccccccCCCCCCEEE
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 196 (456)
+|++++|++|.++.+++.+++++++++++++++.....+... ....+.++.. ...... ..........++++++
T Consensus 2076 aGa~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~a~ 2150 (5163)
T PRK12316 2076 AGGAYVPLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLPAGVARLPLDRD--AEWADY---PDTAPAVQLAGENLAY 2150 (5163)
T ss_pred hceEEeecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccccccceEeccch--hhhhcc---CccCCCCCCCCCCeEE
Confidence 999999999999999999999999999999998766554321 2222322211 111110 0011223457789999
Q ss_pred EEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEec--CCCHHHHH
Q 012774 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ--RFDLKMML 274 (456)
Q Consensus 197 i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~--~~~~~~~~ 274 (456)
++|||||||.||||+++|+++.+.+......+ ...++++++.+.|++|..++..++.++..|+++++.+ .+++..++
T Consensus 2151 ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~fd~~~~~~~~~L~~G~~~~~~~~~~~~~~~~~ 2229 (5163)
T PRK12316 2151 VIYTSGSTGLPKGVAVSHGALVAHCQAAGERY-ELSPADCELQFMSFSFDGAHEQWFHPLLNGARVLIRDDELWDPEQLY 2229 (5163)
T ss_pred EEeCccCCCCCCEeEEccHHHHHHHHHHHHhc-CCCCcceEEEecCchHHHHHHHHHHHHhCCCEEEeCCcccCCHHHHH
Confidence 99999999999999999999999988877777 6888999999999999988889999999999997765 36899999
Q ss_pred HHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccC
Q 012774 275 KAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG 354 (456)
Q Consensus 275 ~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~ 354 (456)
+.|+++++|+++++|+++..|.+...... ...++|.+++|||++++++.++|.+.+++.++++.||+||++..++....
T Consensus 2230 ~~i~~~~vt~~~~~P~~~~~l~~~~~~~~-~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~ 2308 (5163)
T PRK12316 2230 DEMERHGVTILDFPPVYLQQLAEHAERDG-RPPAVRVYCFGGEAVPAASLRLAWEALRPVYLFNGYGPTEAVVTPLLWKC 2308 (5163)
T ss_pred HHHHHcCCeEEEcChHHHHHHHhhhhccc-CCcceeEEEEecccCCHHHHHHHHHhCCCcEEEECccchhheeeeeeeec
Confidence 99999999999999999999987543222 24589999999999999999999998888999999999999876654322
Q ss_pred CCCCC---CCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCC-------CCeeeccc
Q 012774 355 PDECR---RWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP-------DGWMRTGD 424 (456)
Q Consensus 355 ~~~~~---~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~-------~g~~~TGD 424 (456)
..... ...++|+|+++++++|+| +++++++.|+.|||+|+|+++++||+++|+.|++.|.. ++||+|||
T Consensus 2309 ~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~vp~g~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~~~~~~~~~~yrTGD 2387 (5163)
T PRK12316 2309 RPQDPCGAAYVPIGRALGNRRAYILD-ADLNLLAPGMAGELYLGGEGLARGYLNRPGLTAERFVPDPFSASGERLYRTGD 2387 (5163)
T ss_pred ccccccCCCcCCcccccCCCEEEEEC-CCCCCCCCCCeeEEEecchhhcccccCChhhhhhhccCCCCCCCCCeeEeccc
Confidence 21111 225799999999999999 67899999999999999999999999999999999853 35999999
Q ss_pred eEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 425 LCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 425 l~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+|++++||+|+|+||+||+||++|+||+|.||
T Consensus 2388 l~~~~~dG~l~~~GR~d~~iki~G~rie~~eI 2419 (5163)
T PRK12316 2388 LARYRADGVVEYLGRIDHQVKIRGFRIELGEI 2419 (5163)
T ss_pred EEEEcCCCcEEEecCCCCeEEEcCccCChHHH
Confidence 99999999999999999999999999999875
No 80
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=1.4e-56 Score=455.36 Aligned_cols=427 Identities=26% Similarity=0.379 Sum_probs=344.3
Q ss_pred ceeeCCCCCCCCC--CCCCCCCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCE
Q 012774 20 KTFHSLRPPIDLP--PEDAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDT 97 (456)
Q Consensus 20 ~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~ 97 (456)
|-|+.++|+.... +.....++.++|...++++ |+++|+++. ++++||+||.+++.++|+.|..+.|+++||+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~ 78 (560)
T PRK08751 5 RPWLQSYPAGVAAEIDLEQFRTVAEVFATSVAKF----ADRPAYHSF--GKTITYREADQLVEQFAAYLLGELQLKKGDR 78 (560)
T ss_pred cchhhhcCCCCCCccCCcCCCcHHHHHHHHHHhC----CCCceEEEC--CceeeHHHHHHHHHHHHHHHHHHhCCCCCCE
Confidence 4455556553222 1133468999999999999 999999987 7899999999999999999973389999999
Q ss_pred EEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhc----cCCe-EEEEcCC---
Q 012774 98 AFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK----LKHR-TILIDSP--- 169 (456)
Q Consensus 98 V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~----~~~~-~~~~~~~--- 169 (456)
|+++++|+++++++++||+++|++++|++|..+.+++.++++.++++++++++.....+.. .... ++..+..
T Consensus 79 V~i~~~~~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (560)
T PRK08751 79 VALMMPNCLQYPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDML 158 (560)
T ss_pred EEEECCCCHHHHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCCccEEEEechhhhc
Confidence 9999999999999999999999999999999999999999999999999998776554432 1111 2211100
Q ss_pred ----------------------------chhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHH
Q 012774 170 ----------------------------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAV 221 (456)
Q Consensus 170 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~ 221 (456)
.+.+...... ...........++.++++|||||||.||+|.++|.++...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~ 237 (560)
T PRK08751 159 GFPKAALVNFVVKYVKKLVPEYRINGAIRFREALALGR-KHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANM 237 (560)
T ss_pred ccccchhhhhhhhhhhccccccCCCccccHHHHHhccC-CCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHH
Confidence 0111110000 00111223456889999999999999999999999998777
Q ss_pred HHhccCCC---CCC-CCcEEEEecchhhHhhHH-HHHHHhHhcceEEEec-CCCHHHHHHHHHHhcceeEEecHHHHHHH
Q 012774 222 ASSFASSP---KRV-SPAVMLFTMPYFHIYGLF-FCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAM 295 (456)
Q Consensus 222 ~~~~~~~~---~~~-~~~~~~~~~p~~~~~g~~-~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 295 (456)
......+. ... ..+++++.+|++|.+++. ..+.++..|++.++.. .+++..+++.++++++|++.++|.++..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 317 (560)
T PRK08751 238 QQAHQWLAGTGKLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGL 317 (560)
T ss_pred HHHHHhhccccccCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHH
Confidence 65444331 122 246778889999999883 4556677777766654 57899999999999999999999999999
Q ss_pred hcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccCCCCCCCCCccccccCCcEEEE
Q 012774 296 SKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKI 375 (456)
Q Consensus 296 ~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i 375 (456)
.+.......+++++|.+++||+++++++.+.|++.+ +..+++.||+||++..++.... +.....+++|.|++++++++
T Consensus 318 ~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~vG~~~~~~~v~i 395 (560)
T PRK08751 318 LNTPGFDQIDFSSLKMTLGGGMAVQRSVAERWKQVT-GLTLVEAYGLTETSPAACINPL-TLKEYNGSIGLPIPSTDACI 395 (560)
T ss_pred HcCcCcCCcchhhheeeeeCCCCCCHHHHHHHHHHh-CCeEEEeeccccCCCceecccc-cccccCCCcCccCCCceEEE
Confidence 987665566788999999999999999999999987 7899999999999876554322 22234578999999999999
Q ss_pred EcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCC
Q 012774 376 VDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLL 455 (456)
Q Consensus 376 ~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e 455 (456)
+| +++..++.|+.|||+++|+.++.||+++++.+.+.|..+|||+|||+|+++++|++++.||.||+||++|++|+|.|
T Consensus 396 ~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~e 474 (560)
T PRK08751 396 KD-DAGTVLAIGEIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNE 474 (560)
T ss_pred EC-CCCCCCCCCCceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcCCceEEEEeechhheeECCEEEcHHH
Confidence 99 78899999999999999999999999999999988878899999999999999999999999999999999999976
Q ss_pred C
Q 012774 456 N 456 (456)
Q Consensus 456 ~ 456 (456)
+
T Consensus 475 i 475 (560)
T PRK08751 475 I 475 (560)
T ss_pred H
Confidence 4
No 81
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-56 Score=450.13 Aligned_cols=399 Identities=25% Similarity=0.317 Sum_probs=332.4
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
.++.++|.+.+. ++++|+++. ++.+||.||.++++++|+.|.++.|++++++|+++++|+++++++++||++
T Consensus 5 ~~~~~~l~~~a~------~~~~a~~~~--~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~ 76 (529)
T PRK07867 5 PTVAELLLPLAE------DDDRGLYFE--DSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAAL 76 (529)
T ss_pred ccHHHHHHHhcc------cCCceEEEC--CcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 588899887774 688999987 789999999999999999999833889999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc--CCeEEEEcCCchhhhhcccCCCccccccCCCCCCEE
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL--KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVA 195 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 195 (456)
+|++++|+++..+.+++.++++.++++++|++++....+... ...++.++...+.+........ ........+++++
T Consensus 77 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~ 155 (529)
T PRK07867 77 SGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLDPGVRVINVDSPAWADELAAHRDA-EPPFRVADPDDLF 155 (529)
T ss_pred cCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhccCceEEEeccccHHHHhcccCCC-CCCcccCCccceE
Confidence 999999999999999999999999999999998877655543 2334444433344433221111 1122335678999
Q ss_pred EEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhH-HHHHHHhHhcceEEEecCCCHHHHH
Q 012774 196 AIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMML 274 (456)
Q Consensus 196 ~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~ 274 (456)
+++|||||||.||+|+++|+++..+.......+ +....|++++.+|++|.+++ ..++.++..|+++++.+.+++..++
T Consensus 156 ~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~-~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~ 234 (529)
T PRK07867 156 MLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRF-GLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIALRRKFSASGFL 234 (529)
T ss_pred EEEECCCCCCCCcEEEecHHHHHHHHHHHHHhh-CCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEecCCCCHHHHH
Confidence 999999999999999999999988877777666 67788999999999999988 4456788899999998889999999
Q ss_pred HHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccC
Q 012774 275 KAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG 354 (456)
Q Consensus 275 ~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~ 354 (456)
+.++++++|++.++|+.+..++..........+++|. +.||+.+++.. .++.+.+ +.++++.||+||++..+...
T Consensus 235 ~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~lr~-~~gg~~~~~~~-~~~~~~~-g~~l~~~YG~TE~~~~~~~~-- 309 (529)
T PRK07867 235 PDVRRYGATYANYVGKPLSYVLATPERPDDADNPLRI-VYGNEGAPGDI-ARFARRF-GCVVVDGFGSTEGGVAITRT-- 309 (529)
T ss_pred HHHHHhCCeEEeccHHHHHHHHhCCCcccccccceEE-EecCCCChHHH-HHHHHHh-CCcEEEeecccccccccccC--
Confidence 9999999999999999999888765433333457774 56888887764 6777777 88999999999998655431
Q ss_pred CCCCCCCCccccccCCcEEEEEcCCCCCCCCCCC------------cceEEE-ecCCcccccCCCccccccccCCCCeee
Q 012774 355 PDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGK------------EGELSI-RGPTIMKGYVGEPEVTSATLLPDGWMR 421 (456)
Q Consensus 355 ~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~------------~Gel~i-~g~~~~~gy~~~~~~~~~~~~~~g~~~ 421 (456)
. ....+++|.|+++ +++++++++..++.|+ .|||++ +|++++.||+++++.+.+.| .+|||+
T Consensus 310 ~--~~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~-~~g~~~ 384 (529)
T PRK07867 310 P--DTPPGALGPLPPG--VAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERM-RGGVYW 384 (529)
T ss_pred C--CCCCCCcCCCCCC--EEEEECCCCCCCCCCccccccccccCCcceEEEEecCCcccccccCChHhhhhhh-cCCeEe
Confidence 1 1245689999999 6788877788888888 899999 99999999999999998888 589999
Q ss_pred ccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 422 TGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 422 TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
|||+|+++++|++++.||.||+||++|++|+|.||
T Consensus 385 TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eI 419 (529)
T PRK07867 385 SGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPI 419 (529)
T ss_pred eccEEEEeCCCcEEEeccccCeEEECCEEeCHHHH
Confidence 99999999999999999999999999999999874
No 82
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.6e-57 Score=453.13 Aligned_cols=407 Identities=27% Similarity=0.399 Sum_probs=344.1
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
.|+.+++.+.++++ |+++|+++. ++.+||.||.+++++++..|.+ .|+++|++|+++++|+++++++++||++
T Consensus 12 ~~~~~~~~~~~~~~----~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~-~gv~~~~~V~i~~~~~~~~~~~~la~~~ 84 (524)
T PRK06188 12 ATYGHLLVSALKRY----PDRPALVLG--DTRLTYGQLADRISRYIQAFEA-LGLGTGDAVALLSLNRPEVLMAIGAAQL 84 (524)
T ss_pred ccHHHHHHHHHHHC----CCCeEEEEC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 58999999999999 999999998 7899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccc-hHHHHhc----c-C-CeEEEEcCCc-hhhhhcccCC-CccccccC
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSS-VVHKLAK----L-K-HRTILIDSPE-FDSMTMSWNS-KHELDRAK 188 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~-~~~~~~~----~-~-~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~ 188 (456)
+|++++|++|..+.+++.++++.++++.+++++. ....... . . ..++.+.... ...+...... ........
T Consensus 85 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (524)
T PRK06188 85 AGLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPVPDGVDLLAAAAKFGPAPLVAA 164 (524)
T ss_pred hCCEEEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCccchhhHHHhhhccCccccccc
Confidence 9999999999999999999999999999999876 3332221 1 1 1223222211 1111111000 00111122
Q ss_pred CCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEecCC
Q 012774 189 VCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRF 268 (456)
Q Consensus 189 ~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~ 268 (456)
..++++++++|||||||.||+|.++|.++...+......+ ....++++++.+|++|.+++. ++.++..|+++++.+.+
T Consensus 165 ~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~-~~~~~~~~l~~~pl~~~~g~~-~~~~l~~G~~~~~~~~~ 242 (524)
T PRK06188 165 ALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEW-EWPADPRFLMCTPLSHAGGAF-FLPTLLRGGTVIVLAKF 242 (524)
T ss_pred CCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhc-CCCcCcEEEEecCchhhhhHH-HHHHHHcCCEEEEcCCC
Confidence 3446699999999999999999999999998888777776 678899999999999988864 57789999999999999
Q ss_pred CHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccc
Q 012774 269 DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAG 348 (456)
Q Consensus 269 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~ 348 (456)
++..+++.++++++|+++++|+++..+++........++++|.+++||++++++..+.+.+.+ +..+++.||+||++..
T Consensus 243 ~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~ 321 (524)
T PRK06188 243 DPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIERF-GPIFAQYYGQTEAPMV 321 (524)
T ss_pred CHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHHh-CchhhheeCccccCCc
Confidence 999999999999999999999999999988766667789999999999999999999998888 6789999999999766
Q ss_pred cccccCCC----CCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccc
Q 012774 349 VFRTVGPD----ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGD 424 (456)
Q Consensus 349 ~~~~~~~~----~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD 424 (456)
+....... ......++|+|+++++++|+| +++++++.|+.|||+++|+.++.||++++..+...+ .+|||+|||
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD 399 (524)
T PRK06188 322 ITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLD-EDGREVAQGEVGEICVRGPLVMDGYWNRPEETAEAF-RDGWLHTGD 399 (524)
T ss_pred eeecCchhccccccccCCccccccCCcEEEEEc-CCCCCCCCCCeeEEEEECcchhhhhcCChHHhhhhh-cCCceeecc
Confidence 55432111 123457899999999999999 568999999999999999999999999999988888 689999999
Q ss_pred eEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 425 LCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 425 l~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+|++++||++++.||.+++|+++|++|+|.||
T Consensus 400 l~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~I 431 (524)
T PRK06188 400 VAREDEDGFYYIVDRKKDMIVTGGFNVFPREV 431 (524)
T ss_pred eEEEcCCccEEEEeccccceecCCEEECHHHH
Confidence 99999999999999999999999999999764
No 83
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=1.8e-56 Score=451.76 Aligned_cols=404 Identities=24% Similarity=0.330 Sum_probs=338.0
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
.++.+++.+.++ |+++|+++. ++.+||+||.++++++|..|.+ .|+++|++|+++++|+++++++++||++
T Consensus 25 ~~~~~~~~~~a~------p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~v~~~n~~~~~~~~la~~~ 95 (536)
T PRK10946 25 LPLTDILTRHAA------SDAIAVICG--ERQFSYRELNQASDNLACSLRR-QGIKPGDTALVQLGNVAEFYITFFALLK 95 (536)
T ss_pred ccHHHHHHHhhC------CCCeEEEeC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCChHHHHHHHHHHHH
Confidence 688999987775 799999997 7899999999999999999999 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccch--------HHHHhcc--CCeEEEEcCC----chhhhhcccCCCcc
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSV--------VHKLAKL--KHRTILIDSP----EFDSMTMSWNSKHE 183 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~--------~~~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~~ 183 (456)
+|++++++.+.....++..+++.++++++++++.. ...+... ....+.+... .+..+...... .
T Consensus 96 ~G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 173 (536)
T PRK10946 96 LGVAPVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLNDDGEHSLDDAINHPAE--D 173 (536)
T ss_pred cCeEEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecCCCCccHHHHhhCccc--c
Confidence 99988887777778889999999999999997542 2222221 1223322211 22222222111 1
Q ss_pred ccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHH--HHHHHhHhcce
Q 012774 184 LDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLF--FCFRAAALMET 261 (456)
Q Consensus 184 ~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~--~~~~~l~~G~~ 261 (456)
.......++++++++|||||||.||+|+++|+++...+......+ ....++++++.+|++|.+++. ..+.++..|++
T Consensus 174 ~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~-~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~ 252 (536)
T PRK10946 174 FTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEIC-GFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGT 252 (536)
T ss_pred cccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhc-CCCCCceEEEecCccccccchhhhHHHHhhcCcE
Confidence 112334678999999999999999999999999999888777666 678889999999999988873 57788999999
Q ss_pred EEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCC--CCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEec
Q 012774 262 AVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGG--STDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQA 339 (456)
Q Consensus 262 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~--~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~ 339 (456)
+++.+.+++..+++.++++++|++.++|..+..+++.. ......++++|.+++||+++++++.+.+.+.+ ++++++.
T Consensus 253 ~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~-g~~~~~~ 331 (536)
T PRK10946 253 VVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRIPAEL-GCQLQQV 331 (536)
T ss_pred EEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHHHHhc-CCeEEEe
Confidence 99998899999999999999999999999999998753 22234578999999999999999999999988 8999999
Q ss_pred cCccccccccccccCCCCCCCCCcccccc-CCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCC
Q 012774 340 YGLTESTAGVFRTVGPDECRRWGSTGRLS-AGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDG 418 (456)
Q Consensus 340 yG~tE~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g 418 (456)
||+||++..... .........+++|+|+ |++.++|+| +++++++.|+.|||+++|+.++.||+++++.+.+.|+.++
T Consensus 332 YG~tE~~~~~~~-~~~~~~~~~~~~G~p~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~ 409 (536)
T PRK10946 332 FGMAEGLVNYTR-LDDSDERIFTTQGRPMSPDDEVWVAD-ADGNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANG 409 (536)
T ss_pred ecccccceeeec-CCCccccccccCCcccCCCceEEEEC-CCCCCCCCCCccEEEEecCccchhhcCCcccchhhcccCC
Confidence 999997544322 1222223457899999 799999999 7789999999999999999999999999999999998899
Q ss_pred eeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 419 WMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 419 ~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
||+|||+|++|+||++++.||.+|+||++|++|+|.|+
T Consensus 410 ~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~ei 447 (536)
T PRK10946 410 FYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEEI 447 (536)
T ss_pred ceecCceEEECCCCcEEEeccccceeecCCEEEcHHHH
Confidence 99999999999999999999999999999999999764
No 84
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=2.4e-56 Score=458.77 Aligned_cols=408 Identities=19% Similarity=0.177 Sum_probs=319.2
Q ss_pred CCCCCHHHHhhhcccCCCCCCCCCcEEEECCC---CceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHH
Q 012774 35 DAPISAVDYVSSLRATLPWRDDDTVALINSVT---GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPIL 111 (456)
Q Consensus 35 ~~~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~---~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~ 111 (456)
.+.+|+.+.+.++ . ++++|+++... .+++||+||.+++.++|+.|.+ +|+++||+|+++++|+++++++
T Consensus 84 ~~~~n~~~~~~~~---~----~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-~Gv~~GdrV~i~~~n~~e~~~~ 155 (652)
T TIGR01217 84 GARLNYAENLLRA---A----GTEPALLYVDETHEPAPVTWAELRRQVASLAAALRA-LGVRPGDRVSGYLPNIPQAVVA 155 (652)
T ss_pred CCeeeHHHHHhcc---C----CCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHH
Confidence 5668888888763 3 67888877422 2589999999999999999998 8999999999999999999999
Q ss_pred HHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccch---------HHHHh----ccC--CeEEEEcC--------
Q 012774 112 YFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSV---------VHKLA----KLK--HRTILIDS-------- 168 (456)
Q Consensus 112 ~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~----~~~--~~~~~~~~-------- 168 (456)
++||+++|++++|+++.++.+++.+++++++++++|+++.. ...+. ... ..+++++.
T Consensus 156 ~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 235 (652)
T TIGR01217 156 MLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYLGPRETEA 235 (652)
T ss_pred HHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCCCCccccc
Confidence 99999999999999999999999999999999999997643 12221 111 12333321
Q ss_pred ------CchhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHH-HHhccCCCCCCCCcEEEEec
Q 012774 169 ------PEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAV-ASSFASSPKRVSPAVMLFTM 241 (456)
Q Consensus 169 ------~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~-~~~~~~~~~~~~~~~~~~~~ 241 (456)
..++++..... ...........+++++++|||||||.||||+++|++++... ......+ ...++|++++..
T Consensus 236 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-~~~~~d~~~~~~ 313 (652)
T TIGR01217 236 PKIDGALDLEDFTAAAQ-AAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHC-DLGPGDRLFYYT 313 (652)
T ss_pred ccccCcccHHHHHhccc-CCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhcc-CCCCCcEEEEeC
Confidence 11333322111 00111223456899999999999999999999999875433 3333334 678889999999
Q ss_pred chhhHhhHHHHHHHhHhcceEEEecC----CCHHHHHHHHHHhcceeEEecHHHHHHHhcCCC--CCCCCCCCceEEEec
Q 012774 242 PYFHIYGLFFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVACG 315 (456)
Q Consensus 242 p~~~~~g~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~v~~g 315 (456)
|+.|+.. ..++.++..|+++++.+. .++..+++.++++++|++..+|.++..+..... ....++++||.+++|
T Consensus 314 ~~~~~~~-~~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i~~g 392 (652)
T TIGR01217 314 TTGWMMW-NWLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCVAST 392 (652)
T ss_pred Ccchhhh-HHHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEEEee
Confidence 9998753 345689999999999852 378999999999999999888888877765321 234578999999999
Q ss_pred CCCCCHHHHHHHHHhCC-CCceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEE
Q 012774 316 AAPLGKDTIMAFASKFP-KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSI 394 (456)
Q Consensus 316 G~~~~~~~~~~~~~~~~-~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i 394 (456)
|+++++++.+++.+.++ +..+.+.||+||++.+.... ........+++|.|.+|++++|+| ++|+++ +|+.|||++
T Consensus 393 Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~-~~~~~~~~g~~g~p~~g~~v~ivd-~~g~~~-~g~~GEl~v 469 (652)
T TIGR01217 393 GSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGA-NPTLPVHIGEIQAPGLGTAVQSWD-PEGKPV-TGEVGELVC 469 (652)
T ss_pred cCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCC-CCCCCCcCCccCCCcCCCceEEEC-CCCCCC-CCCccEEEE
Confidence 99999999999998873 45678999999975443321 122223457899999999999999 678877 599999999
Q ss_pred ecC--CcccccCCCccccc--cc-cC-CCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 395 RGP--TIMKGYVGEPEVTS--AT-LL-PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 395 ~g~--~~~~gy~~~~~~~~--~~-~~-~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+|+ +++.|||++++.+. +. |. .+|||+|||+|++|+||+++|+||.||+||++|+||+|.||
T Consensus 470 ~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~EI 537 (652)
T TIGR01217 470 TNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSAEI 537 (652)
T ss_pred ecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHHHH
Confidence 996 58899999998654 12 21 26899999999999999999999999999999999999875
No 85
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=1.1e-56 Score=450.63 Aligned_cols=402 Identities=21% Similarity=0.298 Sum_probs=339.0
Q ss_pred CHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHh
Q 012774 39 SAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSL 118 (456)
Q Consensus 39 ~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~ 118 (456)
|+.+.+.+.+..+ |+++|+.+. +.++||+||.+++.++|+.|.+ .|+++|++|+++++|+.+++++++||+++
T Consensus 1 ~~~~~l~~~a~~~----p~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~-~g~~~~~~V~i~~~~~~~~~~~~la~~~~ 73 (502)
T TIGR01734 1 KLIEAIQAFAETY----PQTIAYRYQ--GQELTYQQLKEQSDRLAAFIQK-RILPKKSPIIVYGHMEPHMLVAFLGSIKS 73 (502)
T ss_pred CHHHHHHHHHHHC----CCceEEEcC--CcEEeHHHHHHHHHHHHHHHHH-hCCCCCCeEEEEeCCCHHHHHHHHHHHHh
Confidence 5778899999988 999999887 7899999999999999999998 89999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhccCCeEEEEcCCchhhhhcccCCCccccccCCCCCCEEEEE
Q 012774 119 GVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIM 198 (456)
Q Consensus 119 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~ 198 (456)
|++++|+++.++.+++.++++..+++.++++++....... ...+.++. ......... . ........+++.++++
T Consensus 74 G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~-~-~~~~~~~~~~~~~~il 147 (502)
T TIGR01734 74 GHAYIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDAVG--TQIITLSA--LEQAETSGG-P-VSFDHAVKGDDNYYII 147 (502)
T ss_pred CCEEeCCCCcChHHHHHHHHHhcCCCEEEecccccccccC--CceEEchH--hhhhhhhcC-C-ccccccCCCCCeEEEE
Confidence 9999999999999999999999999999998765443322 12222211 111111111 0 1112234568899999
Q ss_pred cCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEecC---CCHHHHHH
Q 012774 199 YSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR---FDLKMMLK 275 (456)
Q Consensus 199 ~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~---~~~~~~~~ 275 (456)
|||||||.||+|.++|+++...+......+ ....+++++...|++|..++..++.++..|+++++.+. .++..+++
T Consensus 148 ~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~ 226 (502)
T TIGR01734 148 YTSGSTGNPKGVQISHDNLVSFTNWMLADF-PLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFE 226 (502)
T ss_pred ECCCCCCCCCEEEEecHHHHHHHHHHHHhC-CCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHH
Confidence 999999999999999999998887777666 67788999999999999998888999999999998864 58899999
Q ss_pred HHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccCC
Q 012774 276 AVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGP 355 (456)
Q Consensus 276 ~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~ 355 (456)
.+.+++++.+.++|+++..+..........++++|.++++|+++++++.+++.+.+++..+++.||+||++..+......
T Consensus 227 ~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~ 306 (502)
T TIGR01734 227 ELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTEATVAVTSVKIT 306 (502)
T ss_pred HHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceEEEEEEEcc
Confidence 99999999999999999887765444555688999999999999999999999999999999999999997654432211
Q ss_pred C---CCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccC---CCCeeeccceEEEc
Q 012774 356 D---ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLL---PDGWMRTGDLCYID 429 (456)
Q Consensus 356 ~---~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~---~~g~~~TGDl~~~~ 429 (456)
. ......++|.+.++++++|+| ++++.++.|+.|||+++|+.++.||+++++.+.+.|. ..+||+|||+|++|
T Consensus 307 ~~~~~~~~~~~vg~~~~~~~~~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~ 385 (502)
T TIGR01734 307 QEILDQYPRLPIGFAKPDMNLFIMD-EEGEPLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTIT 385 (502)
T ss_pred ccccccCCccccccccCCCEEEEEC-CCCCCCCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEE
Confidence 1 122335799999999999999 6689999999999999999999999999998887652 23599999999998
Q ss_pred cCCcEEEecccccceeeCCeeecCCCC
Q 012774 430 EDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 430 ~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
++ ++++.||.+|+||++|++|+|.||
T Consensus 386 ~~-~l~i~GR~~d~i~~~G~~v~~~~I 411 (502)
T TIGR01734 386 DG-QLFYQGRLDFQIKLHGYRIELEDI 411 (502)
T ss_pred CC-EEEEeccccCeEEECcEEeCHHHH
Confidence 76 999999999999999999999864
No 86
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.2e-56 Score=451.37 Aligned_cols=407 Identities=32% Similarity=0.502 Sum_probs=336.1
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
.++.+++.+.+..+ |+++|+++. ++.+||+||.+++.++|+.|.+ .|+++||+|+++++|+++++++++||++
T Consensus 24 ~~~~~~~~~~a~~~----p~~~a~~~~--~~~~ty~eL~~~~~~la~~L~~-~gv~~gd~V~i~~~~~~~~~~~~lA~~~ 96 (563)
T PRK06710 24 QPLHKYVEQMASRY----PEKKALHFL--GKDITFSVFHDKVKRFANYLQK-LGVEKGDRVAIMLPNCPQAVIGYYGTLL 96 (563)
T ss_pred ccHHHHHHHHHHHC----CCceEEEec--CeeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHH
Confidence 58999999999988 999999987 8899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc----CCe-EEEEcCCc----------------------
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----KHR-TILIDSPE---------------------- 170 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~~~-~~~~~~~~---------------------- 170 (456)
+|++++|++|..+.+++.++++.++++++++++.....+... ... +++.....
T Consensus 97 ~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (563)
T PRK06710 97 AGGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSATKIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVV 176 (563)
T ss_pred cCeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhhccceeEEeccccccccccccccchhhcccccccc
Confidence 999999999999999999999999999999987654433211 011 11110000
Q ss_pred ----------hhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCC-CCCCcEEEE
Q 012774 171 ----------FDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK-RVSPAVMLF 239 (456)
Q Consensus 171 ----------~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~-~~~~~~~~~ 239 (456)
++.+.... ...........++.++++|||||||.||+|.++|+++..+.......... ...++++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~ 254 (563)
T PRK06710 177 KVSESETIHLWNSVEKEV--NTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLG 254 (563)
T ss_pred cccccchhhhhhhhhhcc--ccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEE
Confidence 00000000 00001111234789999999999999999999999997654333322212 244568899
Q ss_pred ecchhhHhhH-HHHHHHhHhcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCC
Q 012774 240 TMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAP 318 (456)
Q Consensus 240 ~~p~~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~ 318 (456)
++|++|.+++ ..++.++..|+++++.+.+++..+++.|+++++|++.++|+++..+.+........++++|.+++||++
T Consensus 255 ~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~~ 334 (563)
T PRK06710 255 VLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSAP 334 (563)
T ss_pred eCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCCc
Confidence 9999999988 445678889999999988999999999999999999999999999988765555567899999999999
Q ss_pred CCHHHHHHHHHhCCCCceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCC
Q 012774 319 LGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPT 398 (456)
Q Consensus 319 ~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~ 398 (456)
+++++.+++.+.+ +..+++.||+||++..+..... ......+++|+|.+++.+++++++++.+++.|+.|||+++|+.
T Consensus 335 ~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~~Gel~v~g~~ 412 (563)
T PRK06710 335 LPVEVQEKFETVT-GGKLVEGYGLTESSPVTHSNFL-WEKRVPGSIGVPWPDTEAMIMSLETGEALPPGEIGEIVVKGPQ 412 (563)
T ss_pred CCHHHHHHHHHhh-CCCEecccccccCccccccCcc-cccccCCccCCCCCCCeEEEEECCCCccCCCCCceEEEEecCc
Confidence 9999999999987 8899999999999876543221 1223457899999999999999888999999999999999999
Q ss_pred cccccCCCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 399 IMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 399 ~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
++.||+++++.+...+ .+|||+|||+++++++|+++++||.||+||++|++|+|.|+
T Consensus 413 ~~~gY~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~ei 469 (563)
T PRK06710 413 IMKGYWNKPEETAAVL-QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREV 469 (563)
T ss_pred cchhhhCChHHHhhhc-ccCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHHH
Confidence 9999999999998887 58999999999999999999999999999999999999874
No 87
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=5.3e-57 Score=536.89 Aligned_cols=401 Identities=20% Similarity=0.260 Sum_probs=346.2
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
.++++++.++++++ |+++|+++. +..+||+||.++++++|+.|.+ .|+++|++|+|+++++++++++++|+++
T Consensus 3720 ~~~~~~~~~~~~~~----p~~~Av~~~--~~~~tY~eL~~~~~~la~~L~~-~gv~~~~~V~v~~~~s~~~~v~~lavlk 3792 (4334)
T PRK05691 3720 QSYVRLFEAQVAAH----PQRIAASCL--DQQWSYAELNRAANRLGHALRA-AGVGVDQPVALLAERGLDLLGMIVGSFK 3792 (4334)
T ss_pred cCHHHHHHHHHHhC----CCceEEEcC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHh
Confidence 58999999999999 999999998 7899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-------CCe-EEEEcCCchhhhhcccCCCccccccCC
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-------KHR-TILIDSPEFDSMTMSWNSKHELDRAKV 189 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (456)
+|++++||+|.++.+++.+++++++++++++++......... ... +++.+. ...... .........
T Consensus 3793 aG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~ 3866 (4334)
T PRK05691 3793 AGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVWEE-----VQAGEV-ASHNPGIYS 3866 (4334)
T ss_pred hCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeeecc-----cccccc-cccCCCCCC
Confidence 999999999999999999999999999999987654332211 111 111111 100000 001122345
Q ss_pred CCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEecC--
Q 012774 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR-- 267 (456)
Q Consensus 190 ~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~-- 267 (456)
.+++.+|++|||||||.||||+++|+++.+.+......+ ...+.++++...++.|..++..++.++..|+++++.+.
T Consensus 3867 ~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~fd~s~~~~~~~l~~G~~l~i~~~~~ 3945 (4334)
T PRK05691 3867 GPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYL-ALSEADVIAQTASQSFDISVWQFLAAPLFGARVEIVPNAI 3945 (4334)
T ss_pred CCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhc-CCCccceEEEecCCchhHHHHHHHHHHhCCCEEEEcCccc
Confidence 678999999999999999999999999999998887777 78999999999999999999999999999999999863
Q ss_pred -CCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccc
Q 012774 268 -FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTEST 346 (456)
Q Consensus 268 -~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~ 346 (456)
.++..+++.++++++|++.++|+++..++... ...++++|.+++|||++++++.++|.+.+++++++|.||+||++
T Consensus 3946 ~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t 4022 (4334)
T PRK05691 3946 AHDPQGLLAHVQAQGITVLESVPSLIQGMLAED---RQALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECS 4022 (4334)
T ss_pred cCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc---cccCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccce
Confidence 57899999999999999999999999887542 23478999999999999999999999988899999999999998
Q ss_pred cccccccCCCC--CCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCC-------C
Q 012774 347 AGVFRTVGPDE--CRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP-------D 417 (456)
Q Consensus 347 ~~~~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~-------~ 417 (456)
..++....... .....++|+|+++++++|+| +.++++|.|..|||+|+|+.+++||+++|+.|+++|.+ +
T Consensus 4023 ~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~~~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~ 4101 (4334)
T PRK05691 4023 DDVAFFRVDLASTRGSYLPIGSPTDNNRLYLLD-EALELVPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGE 4101 (4334)
T ss_pred eEEEEEEcccccccCCcCCCCCccCCCEEEEEC-CCCCCCCCCCceEEEEecccccccccCCcccchhhcccCCCCCCCc
Confidence 87654332211 12335799999999999999 88999999999999999999999999999999999853 4
Q ss_pred CeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 418 GWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 418 g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+||+|||+|++++||+|+|+||.|++||++|+||+|.||
T Consensus 4102 ~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~riel~eI 4140 (4334)
T PRK05691 4102 RLYRTGDLARRRSDGVLEYVGRIDHQVKIRGYRIELGEI 4140 (4334)
T ss_pred eeeccCcceeecCCCcEEEecccCCcEEeceEEecHHHH
Confidence 699999999999999999999999999999999999875
No 88
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=9.6e-57 Score=534.69 Aligned_cols=402 Identities=23% Similarity=0.346 Sum_probs=348.5
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
.+++++|.++++.+ |+++|+++. ++++||+||.++++++|+.|.+ .|+++|++|+++++++++++++++|+++
T Consensus 1131 ~~l~~~~~~~a~~~----p~~~Al~~~--~~~lTY~eL~~~~~~lA~~L~~-~gv~~g~~V~i~~~~s~~~iv~~lailk 1203 (4334)
T PRK05691 1131 AWLPELLNEQARQT----PERIALVWD--GGSLDYAELHAQANRLAHYLRD-KGVGPDVCVAIAAERSPQLLVGLLAILK 1203 (4334)
T ss_pred CCHHHHHHHHHHhC----CCCeEEEEC--CceEeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHH
Confidence 58999999999999 999999987 7899999999999999999999 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-CCeEEEEcCCchhhhhcccCCCccccccCCCCCCEEE
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-KHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAA 196 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 196 (456)
+|++++|++|.++.+++.+++++++++++|+++.....+... ....+.++...... .. .........++++++
T Consensus 1204 aG~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~a~ 1277 (4334)
T PRK05691 1204 AGGAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQAEGVSAIALDSLHLDS----WP--SQAPGLHLHGDNLAY 1277 (4334)
T ss_pred hCCEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhcccccCceEEeeccccccc----cC--CCCCCCCCCCCCeEE
Confidence 999999999999999999999999999999998766555432 12222222111111 00 011122346789999
Q ss_pred EEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEec---CCCHHHH
Q 012774 197 IMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ---RFDLKMM 273 (456)
Q Consensus 197 i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~---~~~~~~~ 273 (456)
++|||||||.||||+++|+++.+.+......+ ...+++++++..|+.|..++..++.++..|+++++.+ ..++..+
T Consensus 1278 ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~fd~s~~~~~~~L~~G~~l~i~~~~~~~~~~~l 1356 (4334)
T PRK05691 1278 VIYTSGSTGQPKGVGNTHAALAERLQWMQATY-ALDDSDVLMQKAPISFDVSVWECFWPLITGCRLVLAGPGEHRDPQRI 1356 (4334)
T ss_pred EEEcCCCCCCCceeEeecHHHHHHHHHHHHhc-CCCCCCEEEEeCCccHHHHHHHHHHHHhCCCEEEEcCccccCCHHHH
Confidence 99999999999999999999999888777777 6889999999999999998888999999999999985 3689999
Q ss_pred HHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCcccccccccccc
Q 012774 274 LKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTV 353 (456)
Q Consensus 274 ~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~ 353 (456)
++.|+++++|++.++|+++..+..... ...++++|.+++|||++++++.++|.+.+++.+++|.||+||++..++...
T Consensus 1357 ~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~ 1434 (4334)
T PRK05691 1357 AELVQQYGVTTLHFVPPLLQLFIDEPL--AAACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGPTETAINVTHWQ 1434 (4334)
T ss_pred HHHHHHcCCeEEECcHHHHHHHHhCcc--cccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCcChheeeeeeee
Confidence 999999999999999999999986532 235789999999999999999999999998999999999999987665432
Q ss_pred CCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCC-------CCeeeccceE
Q 012774 354 GPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP-------DGWMRTGDLC 426 (456)
Q Consensus 354 ~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~-------~g~~~TGDl~ 426 (456)
.........++|+|+++++++|+| +.++.++.|+.|||+|+|+++++||+++|+.|.+.|.. .+||+|||+|
T Consensus 1435 ~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~ 1513 (4334)
T PRK05691 1435 CQAEDGERSPIGRPLGNVLCRVLD-AELNLLPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRA 1513 (4334)
T ss_pred cccccCCCCcccceeCCCEEEEEC-CCCCCCCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceE
Confidence 222233457899999999999999 77899999999999999999999999999999998853 2499999999
Q ss_pred EEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 427 YIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 427 ~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
++++||+++|+||+|++||++|+||+|.||
T Consensus 1514 ~~~~dG~l~~~GR~d~qiki~G~rie~~eI 1543 (4334)
T PRK05691 1514 RWNADGALEYLGRLDQQVKLRGFRVEPEEI 1543 (4334)
T ss_pred EECCCCCEEEecccCcEEEECCEEcCHHHH
Confidence 999999999999999999999999999875
No 89
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.8e-56 Score=454.04 Aligned_cols=406 Identities=21% Similarity=0.277 Sum_probs=326.6
Q ss_pred CCCCCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHH
Q 012774 35 DAPISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (456)
Q Consensus 35 ~~~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la 114 (456)
....|+.+.+.+.++++ |+++|+++. ++.+||+||.++++++|..|.+ .|+++||+|+++++|+++++++++|
T Consensus 34 ~~~~tl~~~l~~~a~~~----p~~~Ai~~~--~~~~Ty~eL~~~~~~la~~L~~-~g~~~gd~V~i~~~n~~~~v~~~lA 106 (600)
T PRK08279 34 DSKRSLGDVFEEAAARH----PDRPALLFE--DQSISYAELNARANRYAHWAAA-RGVGKGDVVALLMENRPEYLAAWLG 106 (600)
T ss_pred CCcccHHHHHHHHHHhC----CCCcEEEeC--CCcccHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCCHHHHHHHHH
Confidence 34479999999999999 999999997 7899999999999999999998 8999999999999999999999999
Q ss_pred HHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-----C-CeEEEEcC------CchhhhhcccCCCc
Q 012774 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----K-HRTILIDS------PEFDSMTMSWNSKH 182 (456)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-----~-~~~~~~~~------~~~~~~~~~~~~~~ 182 (456)
|+++|++++|+++..+.+++.++++.++++++|++++....+... . ..++..+. ..+.++........
T Consensus 107 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (600)
T PRK08279 107 LAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTLDDPEGYEDLAAAAAGAP 186 (600)
T ss_pred HHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCccccccccHHHHhhhcccCC
Confidence 999999999999999999999999999999999998776655422 1 11222221 11222221111000
Q ss_pred ---cccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHH-HHHHHhHh
Q 012774 183 ---ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLF-FCFRAAAL 258 (456)
Q Consensus 183 ---~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~-~~~~~l~~ 258 (456)
.........+++++++|||||||.||+|+++|+++..++......+ ...+++++++.+|++|.+++. .++.++..
T Consensus 187 ~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~ 265 (600)
T PRK08279 187 TTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLL-RLTPDDVLYCCLPLYHNTGGTVAWSSVLAA 265 (600)
T ss_pred ccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhc-CCCCCcEEEEecCchhhhhHHHHHHHHHhc
Confidence 1112234568899999999999999999999999999888777766 688899999999999999985 44567788
Q ss_pred cceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEe
Q 012774 259 METAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQ 338 (456)
Q Consensus 259 G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~ 338 (456)
|+++++.+.+++..+++.++++++|++.++|+++..+............++|.+ +|+.++++++++|.+.++...+++
T Consensus 266 G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~ 343 (600)
T PRK08279 266 GATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRLM--IGNGLRPDIWDEFQQRFGIPRILE 343 (600)
T ss_pred CcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcceeEE--ecCCCCHHHHHHHHHHhCcceeee
Confidence 888888888999999999999999999999999999987654444445667754 478899999999999996667999
Q ss_pred ccCccccccccccccCCCCCCCCCccccccC----CcEEE---------EEcCC-CCCCCCCCCcceEE--EecCCcccc
Q 012774 339 AYGLTESTAGVFRTVGPDECRRWGSTGRLSA----GLEAK---------IVDPE-TGDSLPPGKEGELS--IRGPTIMKG 402 (456)
Q Consensus 339 ~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~----~~~~~---------i~d~~-~~~~~~~g~~Gel~--i~g~~~~~g 402 (456)
.||+||++...... ....+++|.+.+ +..+. +.+.+ ....+++|+.|||+ +.|+.++.|
T Consensus 344 ~YG~tE~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~Gel~~~i~~~~~~~G 418 (600)
T PRK08279 344 FYAASEGNVGFINV-----FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPGEVGLLIGRITDRGPFDG 418 (600)
T ss_pred eecccccceeeccc-----CCCCcccccccccccccceeeeeccCcCceeeCCCCccccCCCCCceeEEEEecCcccccc
Confidence 99999987543321 123456777665 33332 22211 11357789999998 779999999
Q ss_pred cCCCccccccccC------CCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 403 YVGEPEVTSATLL------PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 403 y~~~~~~~~~~~~------~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
| +++..+.+.|. .++||+|||+|++|+||++++.||.||+||++|++|+|.||
T Consensus 419 Y-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~eI 477 (600)
T PRK08279 419 Y-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTEV 477 (600)
T ss_pred c-CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEECCcccCHHHH
Confidence 9 88888877653 25799999999999999999999999999999999999875
No 90
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=9e-56 Score=449.41 Aligned_cols=408 Identities=23% Similarity=0.347 Sum_probs=325.2
Q ss_pred CCCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHH
Q 012774 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (456)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~ 116 (456)
.+|..+.+...++.+ |+++|+++. +.++||+||.++++++|..|.+ .|+++||+|+++++|+++++++++||+
T Consensus 19 ~~~~~~~~~~~~~~~----p~~~a~~~~--~~~~ty~eL~~~~~~lA~~L~~-~g~~~gd~V~i~~~n~~~~~~~~la~~ 91 (567)
T PLN02479 19 ALTPLWFLERAAVVH----PTRKSVVHG--SVRYTWAQTYQRCRRLASALAK-RSIGPGSTVAVIAPNIPAMYEAHFGVP 91 (567)
T ss_pred ccCHHHHHHHHHhhC----CCceEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCcHHHHHHHHHHH
Confidence 367888888888888 999999987 7799999999999999999998 899999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhc------------cCC-eEEEEcCC--------------
Q 012774 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK------------LKH-RTILIDSP-------------- 169 (456)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~------------~~~-~~~~~~~~-------------- 169 (456)
++|++++|+++..+.+++.++++.++++++++++...+.... ... .++++...
T Consensus 92 ~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (567)
T PLN02479 92 MAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKG 171 (567)
T ss_pred hCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccC
Confidence 999999999999999999999999999999998876543221 011 12222211
Q ss_pred --chhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHh
Q 012774 170 --EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIY 247 (456)
Q Consensus 170 --~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 247 (456)
.+.++....... .........++.++++|||||||.||+|+++|+++..........+ ....++++++.+|++|..
T Consensus 172 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~h~~ 249 (567)
T PLN02479 172 AIEYEKFLETGDPE-FAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIW-GMNEGAVYLWTLPMFHCN 249 (567)
T ss_pred cccHHHHHhccccc-cccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhc-CCCCCCEEEEecchhhhh
Confidence 122221111100 0001112234677899999999999999999999876655444444 567889999999999999
Q ss_pred hHHHHHHHhHhcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCC-CCCCCceEEEecCCCCCHHHHHH
Q 012774 248 GLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDG-YDLSSLETVACGAAPLGKDTIMA 326 (456)
Q Consensus 248 g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~-~~l~~lr~v~~gG~~~~~~~~~~ 326 (456)
++...+.....++..+....+++..+++.++++++|+++++|+++..|.+...... ..++++|.++++|+++++++.++
T Consensus 250 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~ 329 (567)
T PLN02479 250 GWCFTWTLAALCGTNICLRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPPPSVLFA 329 (567)
T ss_pred hHHHHHHHHhhcCceEeccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCCHHHHHH
Confidence 98555544444555555677899999999999999999999999999987644322 25789999999999999999999
Q ss_pred HHHhCCCCceEeccCccccccccccccCCC--------C-CCCCCccccccCCcE-EEEEcCCCCCCCCCC--CcceEEE
Q 012774 327 FASKFPKVVLVQAYGLTESTAGVFRTVGPD--------E-CRRWGSTGRLSAGLE-AKIVDPETGDSLPPG--KEGELSI 394 (456)
Q Consensus 327 ~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~--------~-~~~~~~~G~~~~~~~-~~i~d~~~~~~~~~g--~~Gel~i 394 (456)
|.+. +.++++.||+||+++.+..+.... . .....+.|.+.++.. ++|+|++++.+++.+ +.|||++
T Consensus 330 ~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v 407 (567)
T PLN02479 330 MSEK--GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVM 407 (567)
T ss_pred HHhc--CCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEE
Confidence 9875 789999999999865433221000 0 011235688888875 889987778888764 6799999
Q ss_pred ecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 395 RGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 395 ~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+|++++.||+++++.+.+.| .+|||+|||+|++|++|++++.||.||+||++|++|+|.||
T Consensus 408 ~g~~~~~GY~~~~~~t~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eI 468 (567)
T PLN02479 408 RGNMVMKGYLKNPKANEEAF-ANGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEV 468 (567)
T ss_pred eccchhhhhhcCcccccchh-cCCceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHH
Confidence 99999999999999999998 58999999999999999999999999999999999999874
No 91
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.8e-56 Score=446.28 Aligned_cols=394 Identities=28% Similarity=0.374 Sum_probs=317.6
Q ss_pred cccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCC
Q 012774 47 LRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 47 ~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~ 126 (456)
.++++ |+++|+++.++++++||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++|++
T Consensus 6 ~a~~~----p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~-~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~ 80 (501)
T PRK13390 6 HAQIA----PDRPAVIVAETGEQVSYRQLDDDSAALARVLYD-AGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAIN 80 (501)
T ss_pred hhhhC----CCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccc
Confidence 44556 999999886557899999999999999999998 8999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEccchHHHHhccC--CeE-EEEcCC-----chhhhhcccCCCccccccCCCCCCEEEEE
Q 012774 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLAKLK--HRT-ILIDSP-----EFDSMTMSWNSKHELDRAKVCQSDVAAIM 198 (456)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~--~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~a~i~ 198 (456)
+.++++++.++++.++++++++++.......... ... +.+... .+++.... . .......++.++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~a~i~ 154 (501)
T PRK13390 81 HHLTAPEADYIVGDSGARVLVASAALDGLAAKVGADLPLRLSFGGEIDGFGSFEAALAG-----A-GPRLTEQPCGAVML 154 (501)
T ss_pred cCCCHHHHHHHHHhcCCcEEEEcchhhhHHHHhhhccceEEEecCcccccccHHHHhcc-----c-CCCCCCCcccEEEE
Confidence 9999999999999999999999876543322211 111 111110 11111110 0 00111223579999
Q ss_pred cCCCCCCCCchhcc--cHHHHHHHH---HH-hccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEecCCCHHH
Q 012774 199 YSSGTTGRVKGVML--THRNLTAAV---AS-SFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKM 272 (456)
Q Consensus 199 ~TSGtTG~PK~V~~--th~~l~~~~---~~-~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~ 272 (456)
|||||||.||+|++ +|.++.... .. ....+ ....++++++.+|++|.+++...+..+..|+++++.+.+++..
T Consensus 155 ~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~h~~~~~~~~~~~~~g~~~~~~~~~~~~~ 233 (501)
T PRK13390 155 YSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFY-DISESDIYYSSAPIYHAAPLRWCSMVHALGGTVVLAKRFDAQA 233 (501)
T ss_pred eCCCCCCCCCEEEeeccccccccchhhhHhhHHHHh-CCCCCCeEEecccchhhhHHHHHHHHHhcCceEEEcCCcCHHH
Confidence 99999999999995 455543321 11 11122 4678899999999999998855555677899999988899999
Q ss_pred HHHHHHHhcceeEEecHHHHHHHhcCCCC--CCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccc
Q 012774 273 MLKAVEEFRVTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVF 350 (456)
Q Consensus 273 ~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~ 350 (456)
+++.|+++++|++.++|+++..+.+.... ...+++++|.++.||+++++++.+.+++.+ +..+++.||+||+++++.
T Consensus 234 ~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~ 312 (501)
T PRK13390 234 TLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWL-GPIVYEYYSSTEAHGMTF 312 (501)
T ss_pred HHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhc-CCceeeeecccccCceEE
Confidence 99999999999999999999998875422 334578999999999999999999999987 788999999999986544
Q ss_pred cccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCC--CCeeeccceEEE
Q 012774 351 RTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP--DGWMRTGDLCYI 428 (456)
Q Consensus 351 ~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~--~g~~~TGDl~~~ 428 (456)
... .......+++|+|+++ +++|+| ++++++++|+.|||+++|++++.||+++++.+.+.+.. ++|++|||+|++
T Consensus 313 ~~~-~~~~~~~~~~G~~~~g-~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~ 389 (501)
T PRK13390 313 IDS-PDWLAHPGSVGRSVLG-DLHICD-DDGNELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSV 389 (501)
T ss_pred ecc-hhhccCCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEE
Confidence 321 1122345789999999 799999 78899999999999999999999999999999887753 579999999999
Q ss_pred ccCCcEEEecccccceeeCCeeecCCCC
Q 012774 429 DEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 429 ~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
|+||++++.||.||+||++|++|+|.||
T Consensus 390 ~~dg~l~~~gR~~~~i~~~G~~v~p~eI 417 (501)
T PRK13390 390 DEDGYLYLADRKSFMIISGGVNIYPQET 417 (501)
T ss_pred CCCCeEEEeeccccceeECCeeeCHHHH
Confidence 9999999999999999999999999874
No 92
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.8e-56 Score=440.35 Aligned_cols=372 Identities=27% Similarity=0.365 Sum_probs=315.5
Q ss_pred CCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHH
Q 012774 56 DDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEIS 135 (456)
Q Consensus 56 p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~ 135 (456)
++++|++++ ++++||+||.++++++|..|.. +|+|+++++|+++++++++||+++|++++|+++..+.+++.
T Consensus 14 ~~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~------~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~ 85 (471)
T PRK07787 14 DIADAVRIG--GRVLSRSDLAGAATAVAERVAG------ARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVAERR 85 (471)
T ss_pred CCceEEEeC--CcEEEHHHHHHHHHHHHHHhcc------CCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChHHHH
Confidence 889999997 8899999999999999999963 68999999999999999999999999999999999999999
Q ss_pred HHhhhcCCeEEEEccchHHHHhccCCeEEEEcCCchhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHH
Q 012774 136 RQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHR 215 (456)
Q Consensus 136 ~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~ 215 (456)
++++.+++++++++.... ........+...... + .......++++++++|||||||.||+|.++|+
T Consensus 86 ~~l~~~~~~~il~~~~~~--~~~~~~~~~~~~~~~-------~-----~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~ 151 (471)
T PRK07787 86 HILADSGAQAWLGPAPDD--PAGLPHVPVRLHARS-------W-----HRYPEPDPDAPALIVYTSGTTGPPKGVVLSRR 151 (471)
T ss_pred HHHHhcCCCEEEecCCcc--cccccceeeeccccc-------c-----ccCCCCCCCceEEEEECCCCCCCCCEEEEeHH
Confidence 999999999999976311 001110001000000 0 01112456899999999999999999999999
Q ss_pred HHHHHHHHhccCCCCCCCCcEEEEecchhhHhhH-HHHHHHhHhcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHH
Q 012774 216 NLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVA 294 (456)
Q Consensus 216 ~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 294 (456)
++..++......+ ...+++++++.+|++|.+|+ ..++.++..|+++++...+++..+++.|+ +++|++.++|+++..
T Consensus 152 ~l~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~-~~~t~~~~~P~~~~~ 229 (471)
T PRK07787 152 AIAADLDALAEAW-QWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEAYAQALS-EGGTLYFGVPTVWSR 229 (471)
T ss_pred HHHHHHHHHHHhc-CCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCCHHHHHHHHh-hCceEEEcchHHHHH
Confidence 9998887776666 67788999999999999998 56788999999999998899999999999 999999999999999
Q ss_pred HhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccCCCCCCCCCccccccCCcEEE
Q 012774 295 MSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAK 374 (456)
Q Consensus 295 l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 374 (456)
+.+.... ...++++|.+++||+++++++.++|.+.+ +.++++.||+||++...... .......+++|+|+++++++
T Consensus 230 l~~~~~~-~~~l~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~--~~~~~~~~~vG~~~~g~~~~ 305 (471)
T PRK07787 230 IAADPEA-ARALRGARLLVSGSAALPVPVFDRLAALT-GHRPVERYGMTETLITLSTR--ADGERRPGWVGLPLAGVETR 305 (471)
T ss_pred HHhCccc-cccccceeEEEECCCCCCHHHHHHHHHHc-CCCeecccCccccCcceecC--CCCcccCCcccccCCCcEEE
Confidence 9875322 33578999999999999999999999987 78999999999998654332 22233457899999999999
Q ss_pred EEcCCCCCCCC-CCC-cceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEeccc-ccceeeCCeee
Q 012774 375 IVDPETGDSLP-PGK-EGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRL-KDLIKYKGYQV 451 (456)
Q Consensus 375 i~d~~~~~~~~-~g~-~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~-~d~ik~~G~~v 451 (456)
|+| +++.+++ .|+ .|||+++|+.++.||+++++.+.+.|..+|||+|||+|++++||++++.||. |+++|++|++|
T Consensus 306 i~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v 384 (471)
T PRK07787 306 LVD-EDGGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRI 384 (471)
T ss_pred EEC-CCCCCCCCCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcCCCCEEEeCCCCceeEeeCCEEE
Confidence 999 5577776 343 7999999999999999999999999977999999999999999999999996 89999999999
Q ss_pred cCCCC
Q 012774 452 LPLLN 456 (456)
Q Consensus 452 ~p~e~ 456 (456)
+|.|+
T Consensus 385 ~~~eI 389 (471)
T PRK07787 385 GAGEI 389 (471)
T ss_pred CHHHH
Confidence 99874
No 93
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.7e-56 Score=447.00 Aligned_cols=405 Identities=22% Similarity=0.319 Sum_probs=330.2
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECC--CCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSV--TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~--~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~ 115 (456)
.++.+++.+.++.+ |+++++.+.. ..+.+||.||.++++++|+.|.+ .|+++||+|+++++|+++++++++||
T Consensus 10 ~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~-~g~~~~d~v~i~~~~~~~~~~~~la~ 84 (539)
T PRK07008 10 LLISSLIAHAARHA----GDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAA-LGVEPGDRVGTLAWNGYRHLEAYYGV 84 (539)
T ss_pred CCHHHHHHHHHhhC----CCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCcHHHHHHHHHH
Confidence 47889999888888 8888887532 23689999999999999999999 89999999999999999999999999
Q ss_pred HHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-----CCeE-EEEcC-----------Cchhhhhccc
Q 012774 116 LSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KHRT-ILIDS-----------PEFDSMTMSW 178 (456)
Q Consensus 116 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-----~~~~-~~~~~-----------~~~~~~~~~~ 178 (456)
+++|++++|+++..+.+++..+++.+++++++++++..+.+.+. ..+. +.+.. ..++++....
T Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (539)
T PRK07008 85 SGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAHLPAGSTPLLCYETLVGAQ 164 (539)
T ss_pred HhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCccccCCcccccHHHHhccc
Confidence 99999999999999999999999999999999998766544321 1111 11111 1122222111
Q ss_pred CCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHH--HhccCCCCCCCCcEEEEecchhhHhhHHHHHHHh
Q 012774 179 NSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVA--SSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAA 256 (456)
Q Consensus 179 ~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l 256 (456)
.. ........+++.++++|||||||.||+|++||+++..+.. .....+ +...+|++++..|++|..++...+.++
T Consensus 165 ~~--~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~-~~~~~d~~l~~~p~~h~~~~~~~~~~l 241 (539)
T PRK07008 165 DG--DYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAM-GLSARDAVLPVVPMFHVNAWGLPYSAP 241 (539)
T ss_pred CC--CcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhccccc-CCCCCceEEecCchHHhhhHHHHHHHH
Confidence 11 1112234567899999999999999999999999865432 222334 567889999999999988877678889
Q ss_pred HhcceEEEec-CCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCc
Q 012774 257 ALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVV 335 (456)
Q Consensus 257 ~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~ 335 (456)
..|+++++.+ .+++..+++.++++++|++.++|+++..+++.......+++++|.++++|+++++++++++.+.+ +.+
T Consensus 242 ~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~ 320 (539)
T PRK07008 242 LTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIRTFEDEY-GVE 320 (539)
T ss_pred hcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHHHh-CCc
Confidence 9999998874 67999999999999999999999999999987766666789999999999999999999999988 899
Q ss_pred eEeccCccccccccccccCCC---------CCCCCCccccccCCcEEEEEcCCCCCCCCCC--CcceEEEecCCcccccC
Q 012774 336 LVQAYGLTESTAGVFRTVGPD---------ECRRWGSTGRLSAGLEAKIVDPETGDSLPPG--KEGELSIRGPTIMKGYV 404 (456)
Q Consensus 336 i~~~yG~tE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g--~~Gel~i~g~~~~~gy~ 404 (456)
+++.||+||++..+..+.... ......++|+|+|+++++|+| ++++.++.+ +.|||+++|+.++.||+
T Consensus 321 l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy~ 399 (539)
T PRK07008 321 VIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVG-DDGRELPWDGKAFGDLQVRGPWVIDRYF 399 (539)
T ss_pred eecccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEEC-CCCCccCCCCCcceEEEEeCCccchhhc
Confidence 999999999987554322110 011236789999999999999 667777753 57999999999999999
Q ss_pred CCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 405 GEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 405 ~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+++. ..+ .+|||+|||+|++|+||++++.||.||+||++|++|+|.||
T Consensus 400 ~~~~---~~~-~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eI 447 (539)
T PRK07008 400 RGDA---SPL-VDGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDI 447 (539)
T ss_pred CChh---hhh-cCCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHH
Confidence 9883 344 37899999999999999999999999999999999999874
No 94
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=5.4e-55 Score=441.84 Aligned_cols=406 Identities=29% Similarity=0.440 Sum_probs=332.5
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
-++.+++.+.++.+ |+++|+++. ++.+||.||.++++++|..|.+ .|+.+||+|+++++|+++++++++||++
T Consensus 21 ~~~~~~~~~~~~~~----p~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~-~gi~~g~~V~i~~~~~~~~~~~~la~~~ 93 (541)
T TIGR03205 21 GTLPDLLSKAAADY----GPRPALEFR--DRPITYTELEAMAETAAAALLR-AGYGKDASVALYLGNTPDHPINFFGALK 93 (541)
T ss_pred CCHHHHHHHHHHHc----CCCceEEEC--CcEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHh
Confidence 48999999999999 999999987 7899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccch--HHHHhc-----cCCeEEEEcCCc-------------------h
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSV--VHKLAK-----LKHRTILIDSPE-------------------F 171 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~--~~~~~~-----~~~~~~~~~~~~-------------------~ 171 (456)
+|++++|++|..+.+++.++++.++++++++++.. .....+ ....+++.+... +
T Consensus 94 ~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (541)
T TIGR03205 94 AGARVVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPIPADPRIVTY 173 (541)
T ss_pred cCeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhcccceEEEEecccccccccccccccCCCcccccH
Confidence 99999999999999999999999999999998632 111111 111222222111 1
Q ss_pred hhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCC-----CCCCCCcEEEEecchhhH
Q 012774 172 DSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS-----PKRVSPAVMLFTMPYFHI 246 (456)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~-----~~~~~~~~~~~~~p~~~~ 246 (456)
+++.... ..........+++.++++|||||||.||+|+++|+++....... ..+ ......+++++..|++|.
T Consensus 174 ~~~~~~~--~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~p~~~~ 250 (541)
T TIGR03205 174 ADFVKGA--AAPAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIY-DVWGKPSRATRGDVERVICVLPLFHI 250 (541)
T ss_pred HHHHhcC--CCCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHH-HhhcccccccCCCCceEEEeccHHHH
Confidence 1111100 00111123456889999999999999999999999987654321 111 012345789999999999
Q ss_pred hhH-HHHHHHhHhcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHH
Q 012774 247 YGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIM 325 (456)
Q Consensus 247 ~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~ 325 (456)
+++ ..++.++..|+++++...++++.+++.|+++++|++.++|+++..+++........++++|.+++||+++++++.+
T Consensus 251 ~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~~~ 330 (541)
T TIGR03205 251 YALTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLPVEVAN 330 (541)
T ss_pred HHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceEEEccccCCHHHHH
Confidence 888 4567888999999888888999999999999999999999999999876544455678999999999999999999
Q ss_pred HHHHhCCCCceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEc-CCCCCCCCCCCcceEEEecCCcccccC
Q 012774 326 AFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVD-PETGDSLPPGKEGELSIRGPTIMKGYV 404 (456)
Q Consensus 326 ~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~~g~~Gel~i~g~~~~~gy~ 404 (456)
++.+.+ +.++++.||+||++..++.... ......+++|.|++++.++|++ .++++.++.|+.|||+++|+.++.||+
T Consensus 331 ~~~~~~-~~~~~~~YG~TE~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~Gel~v~~~~~~~gy~ 408 (541)
T TIGR03205 331 FFERKT-GLKLKSGWGMTETCSPGTGHPP-EGPDKPGSIGLMLPGIELDVVSLDDPTKVLPPGEVGELRIRGPNVTRGYW 408 (541)
T ss_pred HHHHHh-CCCeecccccccCCcccccCCC-CCCCCCCCcceeccCceeEEEecCCCCccCCCCCeeEEEEecCCcccccc
Confidence 998877 7899999999999876654322 2223457899999999988864 266788999999999999999999999
Q ss_pred CCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 405 GEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 405 ~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
++++.+.+.| .++||+|||++++++||++++.||.||+||++|++|+|.|+
T Consensus 409 ~~~~~~~~~~-~~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eI 459 (541)
T TIGR03205 409 NRPEESAEAF-VGDRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMI 459 (541)
T ss_pred CChhhhHhhh-ccCCcccCceEEEcCCceEEEEccccCeEEECCEEECHHHH
Confidence 9999998888 47899999999999999999999999999999999999764
No 95
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=3.7e-55 Score=439.94 Aligned_cols=401 Identities=20% Similarity=0.307 Sum_probs=334.6
Q ss_pred HHHhhhc-ccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhC
Q 012774 41 VDYVSSL-RATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLG 119 (456)
Q Consensus 41 ~~~l~~~-~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G 119 (456)
.+++.++ ++.+ ||++|+++. +..+||.||.++++++|+.|.+ .|+++|++|+++++|+++++++++||+++|
T Consensus 7 ~~~~~~~~~~~~----p~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~-~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G 79 (508)
T TIGR02262 7 EDLLDRNVVEGR----GGKTAFIDD--ISSLSYGELEAQVRRLGAALRR-LGVKREERVLLLMLDGVDFPIAFLGAIRAG 79 (508)
T ss_pred HHHHHHHHhccc----CCceEEEeC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 4455554 4557 999999987 7899999999999999999998 899999999999999999999999999999
Q ss_pred CeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-----C-CeEEEEcCC-----chhhhhcccCCCccccccC
Q 012774 120 VIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----K-HRTILIDSP-----EFDSMTMSWNSKHELDRAK 188 (456)
Q Consensus 120 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-----~-~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 188 (456)
++++|+++..+.+++.++++.++++++++++.....+.+. . ..++..+.. .+.++..... .......
T Consensus 80 ~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 157 (508)
T TIGR02262 80 IVPVALNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGRPEAGEVQLAELLATES--EQFKPAA 157 (508)
T ss_pred cEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCCCCcccccHHHHhhcCC--CccCCCC
Confidence 9999999999999999999999999999998766554321 1 122223221 1222221111 0111233
Q ss_pred CCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHH-hccCCCCCCCCcEEEEecchhhHhhH-HHHHHHhHhcceEEEec
Q 012774 189 VCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVAS-SFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQ 266 (456)
Q Consensus 189 ~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~~~~~ 266 (456)
..++++++++|||||||.||+|.++|+++...+.. ....+ +...+++++..+|++|..++ ..++.++..|+++++.+
T Consensus 158 ~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~-~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 236 (508)
T TIGR02262 158 TQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTL-GIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMG 236 (508)
T ss_pred CCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhc-CCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeC
Confidence 45689999999999999999999999999877765 23333 67888999999999999888 55667888999888875
Q ss_pred -CCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCcccc
Q 012774 267 -RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTES 345 (456)
Q Consensus 267 -~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~ 345 (456)
.+++..+++.|+++++|+++++|.++..++...........++|.+++||+++++++.+.|++.+ ++++++.||+||+
T Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE~ 315 (508)
T TIGR02262 237 ERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALPAEVGQRWQARF-GVDIVDGIGSTEM 315 (508)
T ss_pred CCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcCCCCCHHHHHHHHHHh-CCchhhCcccccc
Confidence 46899999999999999999999999888766443334567899999999999999999999998 8899999999999
Q ss_pred ccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccce
Q 012774 346 TAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDL 425 (456)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl 425 (456)
+.++..+. ......+++|+|++++.++|+| +++.++++|+.|||+++|+.++.||+++++.+...| .++||+|||+
T Consensus 316 ~~~~~~~~--~~~~~~~~~G~~~~g~~v~i~d-~~~~~~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~-~~~~~~TGD~ 391 (508)
T TIGR02262 316 LHIFLSNL--PGDVRYGTSGKPVPGYRLRLVG-DGGQDVAAGEPGELLISGPSSATMYWNNRAKTRDTF-QGEWTRSGDK 391 (508)
T ss_pred CceeecCC--ccCCCCCCcCCCCCCcEEEEEC-CCCCCCCCCCeeEEEEecCccccccCCCHHHhHhhh-hcCceeccce
Confidence 87655422 2223457899999999999999 889999999999999999999999999999998888 5899999999
Q ss_pred EEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 426 CYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 426 ~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
++++++|.+++.||.||+||++|.+|+|.|+
T Consensus 392 ~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~i 422 (508)
T TIGR02262 392 YVRNDDGSYTYAGRTDDMLKVSGIYVSPFEI 422 (508)
T ss_pred EEEcCCccEEEeccccceeeeCCEEECHHHH
Confidence 9999999999999999999999999999764
No 96
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.3e-55 Score=447.51 Aligned_cols=409 Identities=22% Similarity=0.305 Sum_probs=333.3
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECC-CCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSV-TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~-~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~ 116 (456)
+|+.++|...+..+ |+++|+++.. .++.+||+||.++++++|..|.+..|+++||+|+++++|+++++++++||+
T Consensus 10 ~~~~~~l~~~a~~~----~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~ 85 (576)
T PRK05620 10 LSLTRILEYGSTVH----GDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVA 85 (576)
T ss_pred CcHHHHHHHHHHhC----CCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHH
Confidence 79999999999988 9999998652 347999999999999999999854799999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-----CC-eEEEEcCCc----------------hhhh
Q 012774 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KH-RTILIDSPE----------------FDSM 174 (456)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-----~~-~~~~~~~~~----------------~~~~ 174 (456)
++|++++|+++..+.+++.++++.++++++|+++.....+.+. .. .++.++... |.++
T Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l 165 (576)
T PRK05620 86 CMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEAL 165 (576)
T ss_pred hcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccchhccccccccccHHHH
Confidence 9999999999999999999999999999999998766554321 11 133333211 2222
Q ss_pred hcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHh--ccCCCCCCCCcEEEEecchhhHhhHHHH
Q 012774 175 TMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASS--FASSPKRVSPAVMLFTMPYFHIYGLFFC 252 (456)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~g~~~~ 252 (456)
..... .........++++++++|||||||.||+|.++|+++....... ...+ ....++++++.+|++|.+++...
T Consensus 166 ~~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~-~~~~~~~~l~~~pl~h~~g~~~~ 242 (576)
T PRK05620 166 LDGRS--TVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSL-AVTHGESFLCCVPIYHVLSWGVP 242 (576)
T ss_pred hhcCC--CcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhc-CCCCCCeEEEeCChHHhhhhHHH
Confidence 22111 0111233456899999999999999999999999986544332 2233 56788999999999999999888
Q ss_pred HHHhHhcceEEEec-CCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhC
Q 012774 253 FRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKF 331 (456)
Q Consensus 253 ~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~ 331 (456)
+.++..|+++++.. .+++..+++.|+++++|+++++|+++..++...........++|.+++||+++++++.+.|++.+
T Consensus 243 ~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~ 322 (576)
T PRK05620 243 LAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIKAWEERY 322 (576)
T ss_pred HHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHHHHHHHh
Confidence 88999999988875 57999999999999999999999999988765433333456899999999999999999999988
Q ss_pred CCCceEeccCccccccccccccCCCC------CCCCCccccccCCcEEEEEcCCCCCCCC--CCCcceEEEecCCccccc
Q 012774 332 PKVVLVQAYGLTESTAGVFRTVGPDE------CRRWGSTGRLSAGLEAKIVDPETGDSLP--PGKEGELSIRGPTIMKGY 403 (456)
Q Consensus 332 ~~~~i~~~yG~tE~~~~~~~~~~~~~------~~~~~~~G~~~~~~~~~i~d~~~~~~~~--~g~~Gel~i~g~~~~~gy 403 (456)
+.++++.||+||++..+........ .....++|++.++++++++| + +..++ .+..|||+++|+.++.||
T Consensus 323 -~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~-g~~~~~~~~~~Gel~v~g~~~~~gY 399 (576)
T PRK05620 323 -GVDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVN-D-GQVMESTDRNEGEIQVRGNWVTASY 399 (576)
T ss_pred -CCceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEec-C-CccccCCCCCceEEEEEcCcccccc
Confidence 7899999999999876554322110 01124789999999999999 4 65554 468899999999999999
Q ss_pred CCCcccc----------------ccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 404 VGEPEVT----------------SATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 404 ~~~~~~~----------------~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+++++.+ ...+..+|||+|||+|++++||++++.||.||+||++|++|+|.||
T Consensus 400 ~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eI 468 (576)
T PRK05620 400 YHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQL 468 (576)
T ss_pred cCCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHHHH
Confidence 9999877 2334457899999999999999999999999999999999999764
No 97
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=4.3e-55 Score=439.38 Aligned_cols=403 Identities=23% Similarity=0.327 Sum_probs=339.5
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
+|+.+.|.+.+..+ |+++|+.+. ++++||.||.++++++|..|.+ .|+.+|++|+++++|+.+++++++||++
T Consensus 2 ~~~~~~l~~~a~~~----p~~~~~~~~--~~~~t~~~l~~~~~~~a~~l~~-~g~~~~~~v~~~~~~~~~~~~~~~a~~~ 74 (503)
T PRK04813 2 MDIIETIEEFAQTQ----PDFPAYDYL--GEKLTYGQLKEDSDALAAFIDS-LKLPDKSPIIVFGHMSPEMLATFLGAVK 74 (503)
T ss_pred chHHHHHHHHHHhC----CCceEEEeC--CcEEeHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 57899999999988 999999987 7899999999999999999999 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhccCCeEEEEcCCchhhhhcccCCCccccccCCCCCCEEEE
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAI 197 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i 197 (456)
+|++++|+++..+.+.+.++++..++++++++++... .......+.. .++....... ..........+++.+++
T Consensus 75 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~i 148 (503)
T PRK04813 75 AGHAYIPVDVSSPAERIEMIIEVAKPSLIIATEELPL--EILGIPVITL--DELKDIFATG--NPYDFDHAVKGDDNYYI 148 (503)
T ss_pred cCCEEecCCCCChHHHHHHHHHhcCCCEEEecccccc--cccCCcEEeh--HHhhhhhhcc--ccccccccCCCCCcEEE
Confidence 9999999999999999999999999999999876521 1111122211 1111111000 00111223466889999
Q ss_pred EcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEecC---CCHHHHH
Q 012774 198 MYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR---FDLKMML 274 (456)
Q Consensus 198 ~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~---~~~~~~~ 274 (456)
+|||||||.||+|.++|+++..........+ .....++++...|++|..++..++.++..|+++++.+. .++..++
T Consensus 149 ~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~ 227 (503)
T PRK04813 149 IFTSGTTGKPKGVQISHDNLVSFTNWMLEDF-ALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTLVALPKDMTANFKQLF 227 (503)
T ss_pred EECCCCCCCCcEEEeehHHHHHHHHHHHHHc-CCCcCceeeecCCcchhHhHHHHHHHHhcCCEEEEcChhhhcCHHHHH
Confidence 9999999999999999999998877766666 67888999999999999988888899999999998874 5889999
Q ss_pred HHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccC
Q 012774 275 KAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVG 354 (456)
Q Consensus 275 ~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~ 354 (456)
+.++++++|++..+|+++..+..........++++|.++++|+++++.+.+++.+.+++..+++.||+||++..+.....
T Consensus 228 ~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~ 307 (503)
T PRK04813 228 ETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTEATVAVTSIEI 307 (503)
T ss_pred HHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccchheeEEEEEEe
Confidence 99999999999999999988766544445568899999999999999999999999988999999999999765543222
Q ss_pred CC---CCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCC-C--CeeeccceEEE
Q 012774 355 PD---ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP-D--GWMRTGDLCYI 428 (456)
Q Consensus 355 ~~---~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~-~--g~~~TGDl~~~ 428 (456)
.. ......++|++.++++++|+| +++..++.|+.|||+++|+.++.||+++++.+.+.|.. + +||+|||+|++
T Consensus 308 ~~~~~~~~~~~~~g~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~ 386 (503)
T PRK04813 308 TDEMLDQYKRLPIGYAKPDSPLLIID-EEGTKLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL 386 (503)
T ss_pred cccccccCCCCcccccCCCCEEEEEC-CCCCCCCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEe
Confidence 11 123345799999999999999 78899999999999999999999999999988887632 3 59999999999
Q ss_pred ccCCcEEEecccccceeeCCeeecCCCC
Q 012774 429 DEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 429 ~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
++|++++.||.||+||++|++|+|.|+
T Consensus 387 -~~g~~~~~GR~~d~i~~~G~~v~~~~i 413 (503)
T PRK04813 387 -EDGLLFYQGRIDFQIKLNGYRIELEEI 413 (503)
T ss_pred -eCCeEEEeccccceEEECcEEeCHHHH
Confidence 999999999999999999999999764
No 98
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-55 Score=449.70 Aligned_cols=403 Identities=24% Similarity=0.335 Sum_probs=315.1
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECC-------CCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSV-------TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~-------~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~ 110 (456)
+++.+.|.+.+..+ |+++|+++.+ ..+++||+||.++++++|+.|.+ .| .+||+|+++++|++++++
T Consensus 1 ~s~~~~l~~~a~~~----p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~-~g-~~gd~V~l~~~n~~~~~~ 74 (578)
T PRK05850 1 SSVPSLLRERASLQ----PDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRR-HG-STGDRAVILAPQGLEYIV 74 (578)
T ss_pred CcHHHHHHHHHhcC----CCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHH-hC-CCCCEEEEEcCCcccHHH
Confidence 46888999999988 9999998632 12689999999999999999998 88 689999999999999999
Q ss_pred HHHHHHHhCCeEecCCC---CCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-------CC-eEEEEcCCchhhhhcccC
Q 012774 111 LYFSLLSLGVIISPANP---VNTESEISRQIQLSNPVIAFATSSVVHKLAKL-------KH-RTILIDSPEFDSMTMSWN 179 (456)
Q Consensus 111 ~~la~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~ 179 (456)
+++||+++|++++|+++ ..+.+++.++++.+++++++++++....+... .. .++.++...+ ...
T Consensus 75 ~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-- 149 (578)
T PRK05850 75 AFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVDLLDL---DSP-- 149 (578)
T ss_pred HHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeeccccc---ccC--
Confidence 99999999999999997 45788999999999999999998776655421 11 1222221110 000
Q ss_pred CCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCC-----CCCCCcEEEEecchhhHhhH-HHHH
Q 012774 180 SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP-----KRVSPAVMLFTMPYFHIYGL-FFCF 253 (456)
Q Consensus 180 ~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~g~-~~~~ 253 (456)
. .........+++++++|||||||.||+|.++|+++..++........ ....++++++++|++|..|+ ..++
T Consensus 150 -~-~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~ 227 (578)
T PRK05850 150 -R-GSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGLVLGVC 227 (578)
T ss_pred -C-ccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCchhHHHHH
Confidence 0 11122345689999999999999999999999999877655433220 13567899999999999998 5578
Q ss_pred HHhHhcceEEEecC----CCHHHHHHHHHHhcceeEEecHHHH-HHHhcCCC---CCCCCCCCceEEEecCCCCCHHHHH
Q 012774 254 RAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIV-VAMSKGGS---TDGYDLSSLETVACGAAPLGKDTIM 325 (456)
Q Consensus 254 ~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~-~~l~~~~~---~~~~~l~~lr~v~~gG~~~~~~~~~ 325 (456)
.++..|+++++.+. .++..+++.+++++++.. .+|..+ ..+..... ....+++++|.+++||+++++++.+
T Consensus 228 ~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~ 306 (578)
T PRK05850 228 APILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVLGIISGSERVHPATLK 306 (578)
T ss_pred HHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhheeEEECcCCCCHHHHH
Confidence 89999999998864 278999999999999865 555554 33333211 1234578999999999999999999
Q ss_pred HHHHhCC-----CCceEeccCccccccccccccCCCCC-----------------------CCCCccccccCCcEEEEEc
Q 012774 326 AFASKFP-----KVVLVQAYGLTESTAGVFRTVGPDEC-----------------------RRWGSTGRLSAGLEAKIVD 377 (456)
Q Consensus 326 ~~~~~~~-----~~~i~~~yG~tE~~~~~~~~~~~~~~-----------------------~~~~~~G~~~~~~~~~i~d 377 (456)
+|.+.|+ +..+++.||+||++..+......... ....++|.|. +.+++|+|
T Consensus 307 ~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~~~ivd 385 (578)
T PRK05850 307 RFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SPTVRIVD 385 (578)
T ss_pred HHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CCEEEEEc
Confidence 9988762 35789999999987544321110000 0011345543 57899999
Q ss_pred CCCCCCCCCCCcceEEEecCCcccccCCCccccccccCC-----------CCeeeccceEEEccCCcEEEecccccceee
Q 012774 378 PETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP-----------DGWMRTGDLCYIDEDGFLFIVDRLKDLIKY 446 (456)
Q Consensus 378 ~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~-----------~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~ 446 (456)
++++.+++.|+.|||+++|+.++.||+++++.+.+.|.. ++||+|||+|+++ ||++++.||.||+||+
T Consensus 386 ~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G~l~~~GR~~d~i~~ 464 (578)
T PRK05850 386 PDTCIECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EGELFIVGRIKDLLIV 464 (578)
T ss_pred CCCCcCCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-CCEEEEEcccccEEEE
Confidence 777889999999999999999999999999999988842 5799999999997 9999999999999999
Q ss_pred CCeeecCCCC
Q 012774 447 KGYQVLPLLN 456 (456)
Q Consensus 447 ~G~~v~p~e~ 456 (456)
+|++|+|.||
T Consensus 465 ~G~~i~p~eI 474 (578)
T PRK05850 465 DGRNHYPDDI 474 (578)
T ss_pred CCeecCHHHH
Confidence 9999999875
No 99
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.2e-55 Score=440.42 Aligned_cols=406 Identities=22% Similarity=0.333 Sum_probs=330.1
Q ss_pred CCCHHHHhhhcccCCCCCCCCCcEEEEC--CCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHH
Q 012774 37 PISAVDYVSSLRATLPWRDDDTVALINS--VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS 114 (456)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~A~~~~--~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la 114 (456)
++++.+++.+.++++ |++++++.. ...+++||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++|
T Consensus 9 ~~~~~~~~~~~a~~~----~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~-~g~~~gd~v~i~~~~~~~~~~~~la 83 (542)
T PRK06018 9 PLLCHRIIDHAARIH----GNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDR-DGIKLGDRVATIAWNTWRHLEAWYG 83 (542)
T ss_pred CCCHHHHHHHHHHhC----CCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchHHHHHHHH
Confidence 379999999999999 999999853 123789999999999999999999 8999999999999999999999999
Q ss_pred HHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-----CC-eEEEEcCC------------chhhhhc
Q 012774 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KH-RTILIDSP------------EFDSMTM 176 (456)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-----~~-~~~~~~~~------------~~~~~~~ 176 (456)
|+++|++++|+++..+.+++.++++.+++++++++.+....+.+. .. .++++... .+.++..
T Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (542)
T PRK06018 84 IMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAHMPQTTLKNAVAYEEWIA 163 (542)
T ss_pred HHhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEecccccccccCccccccHHHHhc
Confidence 999999999999999999999999999999999998766554321 11 12222211 1222211
Q ss_pred ccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHH-HHHH-HhccCCCCCCCCcEEEEecchhhHhhHHHHHH
Q 012774 177 SWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLT-AAVA-SSFASSPKRVSPAVMLFTMPYFHIYGLFFCFR 254 (456)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~-~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~ 254 (456)
.... .........+++++++|||||||.||+|++||++.. .... .....+ +...+++++...|++|.+++...+.
T Consensus 164 ~~~~--~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~p~~h~~~~~~~~~ 240 (542)
T PRK06018 164 EADG--DFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDAL-GTSAADTMLPVVPLFHANSWGIAFS 240 (542)
T ss_pred cCCc--ccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhc-CCCCCCEEEEecCHHHHhhhHHHHh
Confidence 1110 111123456789999999999999999999999743 2222 222333 5678899999999999998877778
Q ss_pred HhHhcceEEEec-CCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCC
Q 012774 255 AAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPK 333 (456)
Q Consensus 255 ~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~ 333 (456)
++..|+++++.. .+++..+++.++++++|++.++|+++..+.+.......+++++|.+++||++++++++++|++ + +
T Consensus 241 ~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~-~-~ 318 (542)
T PRK06018 241 APSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIKAFED-M-G 318 (542)
T ss_pred hhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHH-h-C
Confidence 889999988874 578999999999999999999999999998876655667889999999999999999999999 6 8
Q ss_pred CceEeccCccccccccccccCCCC---------CCCCCccccccCCcEEEEEcCCCCCCCCCC--CcceEEEecCCcccc
Q 012774 334 VVLVQAYGLTESTAGVFRTVGPDE---------CRRWGSTGRLSAGLEAKIVDPETGDSLPPG--KEGELSIRGPTIMKG 402 (456)
Q Consensus 334 ~~i~~~yG~tE~~~~~~~~~~~~~---------~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g--~~Gel~i~g~~~~~g 402 (456)
.++++.||+||++.+++.+..... .....++|+|.++++++|+| ++++.++.+ ..|||+++|+.++.|
T Consensus 319 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d-~~~~~~~~~~~~~Gel~i~g~~~~~g 397 (542)
T PRK06018 319 VEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITD-DAGKELPWDGKTFGRLKVRGPAVAAA 397 (542)
T ss_pred CCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEEC-CCCCCCCCCCCceeEEEEecCCcchh
Confidence 999999999999877654321111 01235789999999999999 667777653 679999999999999
Q ss_pred cCCCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 403 YVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 403 y~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
|++. +...++.+|||+|||+++++++|++++.||.||+||++|++|+|.|+
T Consensus 398 y~~~---~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eI 448 (542)
T PRK06018 398 YYRV---DGEILDDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDL 448 (542)
T ss_pred hhcC---cccEecCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHH
Confidence 9984 23445568999999999999999999999999999999999999764
No 100
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.8e-54 Score=438.39 Aligned_cols=408 Identities=30% Similarity=0.467 Sum_probs=334.4
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
.++.+++...++++ |+++|+++. ++++||+||.++++++|..|.+..|+++|++|+++++|+++++++++||++
T Consensus 23 ~~l~~~l~~~a~~~----p~~~a~~~~--~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 96 (560)
T PRK08974 23 QSLVDMFEQAVARY----ADQPAFINM--GEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILR 96 (560)
T ss_pred ccHHHHHHHHHHhC----CCCceEEEC--CccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 57999999999988 999999987 789999999999999999998437999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhc----cCCeEEEEcC-Cc----------------------
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK----LKHRTILIDS-PE---------------------- 170 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~----~~~~~~~~~~-~~---------------------- 170 (456)
+|++++|++|..+.+++.++++.+++++++++++....+.+ .....+.+.. ..
T Consensus 97 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (560)
T PRK08974 97 AGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVP 176 (560)
T ss_pred cCcEEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcCcceEEEecccccccccccccccchhhhcccccc
Confidence 99999999999999999999999999999998765443321 1111111110 00
Q ss_pred ---------hhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCC--CCCCCcEEEE
Q 012774 171 ---------FDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP--KRVSPAVMLF 239 (456)
Q Consensus 171 ---------~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~--~~~~~~~~~~ 239 (456)
+.+...... ...........+++++++|||||||.||+|.++|.++..++......+. .....+.++.
T Consensus 177 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 255 (560)
T PRK08974 177 KYHLPDAISFRSALHKGR-RMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVT 255 (560)
T ss_pred cccCCCcccHHHHhhccC-CCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEE
Confidence 000000000 0001112245689999999999999999999999999876654332221 2345678889
Q ss_pred ecchhhHhhH-HHHHHHhHhcceEEEec-CCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCC
Q 012774 240 TMPYFHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAA 317 (456)
Q Consensus 240 ~~p~~~~~g~-~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~ 317 (456)
.+|++|.+++ ...+.++..|+++++.. ..++..+++.++++++|++.++|+++..+..........++++|.+++||+
T Consensus 256 ~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~ 335 (560)
T PRK08974 256 ALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGGGM 335 (560)
T ss_pred eCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEecCc
Confidence 9999999887 44666778888876664 568899999999999999999999999998876555566789999999999
Q ss_pred CCCHHHHHHHHHhCCCCceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecC
Q 012774 318 PLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGP 397 (456)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~ 397 (456)
++++.+.+.|++.+ +..+++.||+||++..+..+.. ......+++|.|+|++.++|+| +++..++.|+.|||+++|+
T Consensus 336 ~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~~Gel~v~g~ 412 (560)
T PRK08974 336 AVQQAVAERWVKLT-GQYLLEGYGLTECSPLVSVNPY-DLDYYSGSIGLPVPSTEIKLVD-DDGNEVPPGEPGELWVKGP 412 (560)
T ss_pred cCCHHHHHHHHHHh-CCcEEeeecccccCceeeccCC-CCcccCCccccCcCCCEEEEEC-CCCCCCCCCCceEEEEecC
Confidence 99999999999987 8999999999999877665432 2223457899999999999999 5789999999999999999
Q ss_pred CcccccCCCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 398 TIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 398 ~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
.++.||+++++.+.+.| .+|||+|||+++++++|++++.||.||+|+++|.+|+|.|+
T Consensus 413 ~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~I 470 (560)
T PRK08974 413 QVMLGYWQRPEATDEVI-KDGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEI 470 (560)
T ss_pred CcchhhcCChhhhhhhh-hcCCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHHH
Confidence 99999999999988888 68999999999999999999999999999999999999764
No 101
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=1.2e-54 Score=424.41 Aligned_cols=379 Identities=26% Similarity=0.325 Sum_probs=322.0
Q ss_pred cHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEcc
Q 012774 71 SFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (456)
Q Consensus 71 Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 150 (456)
||.||.+.++++|+.|.++.|+++||+|+++++|+++++++++||+++|++++|+++..+.+.+.++++.++++++++++
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 79999999999999999757999999999999999999999999999999999999999999999999999999999998
Q ss_pred chHHHHhccCCeEEEEcCCchhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCC
Q 012774 151 SVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK 230 (456)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~ 230 (456)
+....+.......+....... ....... ...........+++++++|||||||.||+|.++|+++..........+ .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~~~-~ 157 (408)
T TIGR01733 81 ALASRLAGLVLPIILVDPLEL-AALDDAP-APPPPDAPSGPDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLARRY-G 157 (408)
T ss_pred chhhhccccCCceEEechhhh-hhccccc-ccccccCCCCCCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHHhc-C
Confidence 877766544333333332111 1111100 001111124568899999999999999999999999998888877766 6
Q ss_pred CCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEecCCC---HHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCC
Q 012774 231 RVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFD---LKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLS 307 (456)
Q Consensus 231 ~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~---~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~ 307 (456)
....+++++..|++|.+++..++.++..|+++++.+... +..+.+.++++++|.+.++|.+++.+.+... ..++
T Consensus 158 ~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~~---~~~~ 234 (408)
T TIGR01733 158 LDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNLTPSLLALLAAALP---PALA 234 (408)
T ss_pred CCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHhhh---hccc
Confidence 778899999999999999988999999999999887543 6899999999999999999999999998754 5678
Q ss_pred CceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccCCCC-CC--CCCccccccCCcEEEEEcCCCCCCC
Q 012774 308 SLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDE-CR--RWGSTGRLSAGLEAKIVDPETGDSL 384 (456)
Q Consensus 308 ~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~-~~--~~~~~G~~~~~~~~~i~d~~~~~~~ 384 (456)
++|.+++||+++++++++.+.+.+++..+++.||+||++.++........ .. +..++|.|+++++++|++++ ++.+
T Consensus 235 ~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~-~~~~ 313 (408)
T TIGR01733 235 SLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESPVPIGRPLANTRLYVLDDD-LRPV 313 (408)
T ss_pred CceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccccccCcccCCceEEEECCC-CCCC
Confidence 99999999999999999999999966999999999999887653221111 11 26789999999999999954 8999
Q ss_pred CCCCcceEEEecCCcccccCCCccccccccCCC------C--eeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 385 PPGKEGELSIRGPTIMKGYVGEPEVTSATLLPD------G--WMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 385 ~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~------g--~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+.|+.|||+++|++++.||+++++.+.+.|..+ | ||+|||+|++|++|++++.||.||+|+++|++|+|.|+
T Consensus 314 ~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~~~~~gR~~~~i~~~G~~v~~~~i 393 (408)
T TIGR01733 314 PVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPDGNLEFLGRIDDQVKIRGYRIELGEI 393 (408)
T ss_pred CCCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcCCCCEEEeeccCCEEEeCeEEechHHH
Confidence 999999999999999999999999888877443 2 99999999999999999999999999999999999874
No 102
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.3e-54 Score=435.26 Aligned_cols=407 Identities=24% Similarity=0.343 Sum_probs=327.1
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
++..+.+.+.++.+ |+++|+.+. +..+||+||.++++++|..|.+ .|+++||+|+++++|+++++++++||++
T Consensus 18 ~~~~~~~~~~~~~~----~~~~a~~~~--~~~~ty~~L~~~~~~~a~~L~~-~g~~~g~~v~i~~~~~~~~~~~~lA~~~ 90 (545)
T PRK08162 18 LTPLSFLERAAEVY----PDRPAVIHG--DRRRTWAETYARCRRLASALAR-RGIGRGDTVAVLLPNIPAMVEAHFGVPM 90 (545)
T ss_pred CCHHHHHHHHHHHC----CCCeEEEEC--CeEEEHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCchHHHHHHHHHHH
Confidence 68899999999988 999999987 7899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhc----cC-CeEEEEcCC-------------chhhhhcccC
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAK----LK-HRTILIDSP-------------EFDSMTMSWN 179 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~----~~-~~~~~~~~~-------------~~~~~~~~~~ 179 (456)
+|++++|+++..+.+++.++++.+++++++++++....+.+ .. .+.+.++.. +++++.....
T Consensus 91 ~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (545)
T PRK08162 91 AGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLVIDVDDPEYPGGRFIGALDYEAFLASGD 170 (545)
T ss_pred hCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEEEecCccccccCCCcccccHHHHhccCC
Confidence 99999999999999999999999999999999877655432 11 112222211 1222221111
Q ss_pred CCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhc
Q 012774 180 SKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALM 259 (456)
Q Consensus 180 ~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G 259 (456)
.. .........++.++++|||||||.||+|+++|+++........... ....++++++.+|++|..++...+.....|
T Consensus 171 ~~-~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~-~~~~~~~~l~~~pl~h~~~~~~~~~~~~~~ 248 (545)
T PRK08162 171 PD-FAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAW-GMPKHPVYLWTLPMFHCNGWCFPWTVAARA 248 (545)
T ss_pred cc-ccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-CCCCCCeeEeccCcHhhhhHHHHHHHHHHc
Confidence 00 0111122345789999999999999999999998876655544444 466788999999999999885555555667
Q ss_pred ceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEec
Q 012774 260 ETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQA 339 (456)
Q Consensus 260 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~ 339 (456)
++.++...+++..+++.++++++|++.++|+++..|.+........+.+.+.++++|+.+++++.+.+++. +.++++.
T Consensus 249 g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~ 326 (545)
T PRK08162 249 GTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKMEEI--GFDLTHV 326 (545)
T ss_pred cEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCCCCCHHHHHHHHHh--CCceeec
Confidence 77777778899999999999999999999999999988654433445667778899999999999998875 8899999
Q ss_pred cCccccccccccccCCCC---------CCCCCccccccCC-cEEEEEcCCCCCCCCC-C-CcceEEEecCCcccccCCCc
Q 012774 340 YGLTESTAGVFRTVGPDE---------CRRWGSTGRLSAG-LEAKIVDPETGDSLPP-G-KEGELSIRGPTIMKGYVGEP 407 (456)
Q Consensus 340 yG~tE~~~~~~~~~~~~~---------~~~~~~~G~~~~~-~~~~i~d~~~~~~~~~-g-~~Gel~i~g~~~~~gy~~~~ 407 (456)
||+||+++.+..+..... .....+.|.+.+. ..++|+|++++++++. | +.|||+++|+.++.||++++
T Consensus 327 YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~gY~~~~ 406 (545)
T PRK08162 327 YGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKGYLKNP 406 (545)
T ss_pred ccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhhhcCCh
Confidence 999998654443211110 0112456666553 3688999778888876 3 46999999999999999999
Q ss_pred cccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 408 EVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 408 ~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+.+...| .+|||+|||+|++|+||+++++||.||+||++|++|+|.||
T Consensus 407 ~~~~~~~-~~g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eI 454 (545)
T PRK08162 407 KATEEAF-AGGWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEV 454 (545)
T ss_pred hhhHHHh-hCCCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHH
Confidence 9999888 58999999999999999999999999999999999999764
No 103
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.3e-54 Score=431.72 Aligned_cols=395 Identities=25% Similarity=0.339 Sum_probs=323.0
Q ss_pred hcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecC
Q 012774 46 SLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPA 125 (456)
Q Consensus 46 ~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l 125 (456)
..++++ |+++|+++..+++.+||.||.++++++|+.|.+ .|+++|++|+++++++++++++++||+++|++++++
T Consensus 5 ~~a~~~----p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~-~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l 79 (511)
T PRK13391 5 IHAQTT----PDKPAVIMASTGEVVTYRELDERSNRLAHLFRS-LGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCV 79 (511)
T ss_pred hhHhhC----CCceEEEecCCCCEeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEecc
Confidence 455666 999999986557899999999999999999998 899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc----C--CeEEEEcC-C---c---hhhhhcccCCCccccccCCCCC
Q 012774 126 NPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL----K--HRTILIDS-P---E---FDSMTMSWNSKHELDRAKVCQS 192 (456)
Q Consensus 126 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~--~~~~~~~~-~---~---~~~~~~~~~~~~~~~~~~~~~~ 192 (456)
++.++.+.+.++++.++++++++++.....+.+. . ...+.+.. . . +.+.... .........+
T Consensus 80 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 154 (511)
T PRK13391 80 NSHLTPAEAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGDGELEGFVGYAEAVAG-----LPATPIADES 154 (511)
T ss_pred ccccCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCCCCCcccccHHHHhcC-----CCCCCCCCcc
Confidence 9999999999999999999999987665543211 1 12222221 0 0 1111110 0111112344
Q ss_pred CEEEEEcCCCCCCCCchhcc--cHHHHHHH---HHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEecC
Q 012774 193 DVAAIMYSSGTTGRVKGVML--THRNLTAA---VASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR 267 (456)
Q Consensus 193 ~~a~i~~TSGtTG~PK~V~~--th~~l~~~---~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~ 267 (456)
+.++++|||||||.||+|.+ +|.++... .......+ .....+++++.+|++|.+++...+.++..|+++++.+.
T Consensus 155 ~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~h~~~~~~~~~~~~~g~~~~~~~~ 233 (511)
T PRK13391 155 LGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLW-GFRSDMVYLSPAPLYHSAPQRAVMLVIRLGGTVIVMEH 233 (511)
T ss_pred cccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhc-CCCCCCeEEEcCCHHHHHHHHHHHHHHHcCceEEECCC
Confidence 67899999999999999995 46554322 22223333 46778999999999999998777889999999999998
Q ss_pred CCHHHHHHHHHHhcceeEEecHHHHHHHhcCCC--CCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCcccc
Q 012774 268 FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTES 345 (456)
Q Consensus 268 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~ 345 (456)
++++.+++.++++++|++.++|+++..+.+... ....+++++|.+++||+++++++.+.+++.+ +..+++.||+||+
T Consensus 234 ~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~-g~~v~~~YG~tE~ 312 (511)
T PRK13391 234 FDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWW-GPIIHEYYAATEG 312 (511)
T ss_pred CCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHc-CCceeeeeccccc
Confidence 999999999999999999999999998876532 2234578999999999999999999999988 7889999999999
Q ss_pred ccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCC-Ceeeccc
Q 012774 346 TAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPD-GWMRTGD 424 (456)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~-g~~~TGD 424 (456)
+.+.... ........+++|+|+++ .++|+| +++.+++.|+.|||+++|+ ++.||+++++.+.+.+..+ +||+|||
T Consensus 313 ~~~~~~~-~~~~~~~~~~vG~~~~g-~~~i~d-~~~~~~~~g~~Gel~~~g~-~~~gy~~~~~~~~~~~~~~~~w~~TGD 388 (511)
T PRK13391 313 LGFTACD-SEEWLAHPGTVGRAMFG-DLHILD-DDGAELPPGEPGTIWFEGG-RPFEYLNDPAKTAEARHPDGTWSTVGD 388 (511)
T ss_pred cceEEec-CccccccCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecC-cceEEcCChhHhHHhhccCCCEEecCC
Confidence 8765432 22223455789999999 699999 7789999999999999999 8899999999998887655 8999999
Q ss_pred eEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 425 LCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 425 l~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+|+++++|.+++.||.||++|++|++|+|.|+
T Consensus 389 ~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~ei 420 (511)
T PRK13391 389 IGYVDEDGYLYLTDRAAFMIISGGVNIYPQEA 420 (511)
T ss_pred EEEECCCccEEEeccCCCEEEeCCEEECHHHH
Confidence 99999999999999999999999999999864
No 104
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=6.6e-54 Score=468.98 Aligned_cols=403 Identities=21% Similarity=0.281 Sum_probs=327.1
Q ss_pred CCCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHH
Q 012774 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (456)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~ 116 (456)
..++.+.+.+.+++++ |++.|+.+. +++++||+||.++++++|+.|++ |+++||+|+++++|+++++++++||+
T Consensus 630 ~~~~~~~l~~~~~~~~---~~~~ai~~~-~~~~~Ty~el~~~~~~lA~~L~~--g~~~gd~V~i~~~n~~~~~~~~la~~ 703 (1140)
T PRK06814 630 DRTLFEALIEAAKIHG---FKKLAVEDP-VNGPLTYRKLLTGAFVLGRKLKK--NTPPGENVGVMLPNANGAAVTFFALQ 703 (1140)
T ss_pred cCCHHHHHHHHHHHcC---CCCeEeECC-CCCccCHHHHHHHHHHHHHHHHh--cCCCCCeEEEEcCCchHHHHHHHHHH
Confidence 3678888888888882 456777653 36799999999999999999965 99999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHH------hc--cCCeEEEEcCCc-----hhhhhcccC-CCc
Q 012774 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKL------AK--LKHRTILIDSPE-----FDSMTMSWN-SKH 182 (456)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~------~~--~~~~~~~~~~~~-----~~~~~~~~~-~~~ 182 (456)
++|++++|+++..+.+++.++++++++++++++++..... .+ ...+++.++... ++.+..... ...
T Consensus 704 ~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1140)
T PRK06814 704 SAGRVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQIGLADKIKGLLAGRFP 783 (1140)
T ss_pred HCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhccCChHHHHHHHhhccCC
Confidence 9999999999999999999999999999999987654322 11 122344443211 000000000 000
Q ss_pred cccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhH-HHHHHHhHhcce
Q 012774 183 ELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMET 261 (456)
Q Consensus 183 ~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~ 261 (456)
........++++++++|||||||.||+|.++|+++..+.......+ ...++|++++.+|++|.+++ ..++.++..|++
T Consensus 784 ~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~-~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~ 862 (1140)
T PRK06814 784 LVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARI-DFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVK 862 (1140)
T ss_pred ccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhh-CCCCcCEEEEecchHHHHHHHHHHHHHHHcCCE
Confidence 1111134678999999999999999999999999998888777766 67889999999999999998 667889999999
Q ss_pred EEEecC-CCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEecc
Q 012774 262 AVVMQR-FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAY 340 (456)
Q Consensus 262 ~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~y 340 (456)
+++.+. .+...+.+.++++++|++.++|+++..+.+.. ...+++++|.+++||+++++++.+.+.+.+ +.++++.|
T Consensus 863 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~--~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~-~~~~~~~Y 939 (1140)
T PRK06814 863 VFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA--HPYDFRSLRYVFAGAEKVKEETRQTWMEKF-GIRILEGY 939 (1140)
T ss_pred EEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc--ccccccceeEEEEcCCcCCHHHHHHHHHHh-CCcEEecc
Confidence 988864 56778899999999999999999999987753 345678999999999999999999999988 88999999
Q ss_pred CccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCee
Q 012774 341 GLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWM 420 (456)
Q Consensus 341 G~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~ 420 (456)
|+||++..+.... +...+.+++|+|+|++++++++.+ + .++.|||+++|+.++.||+++++........+|||
T Consensus 940 G~TE~~~~~~~~~--~~~~~~~~vG~p~~g~~~~~~~~~-~----~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~ 1012 (1140)
T PRK06814 940 GVTETAPVIALNT--PMHNKAGTVGRLLPGIEYRLEPVP-G----IDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWY 1012 (1140)
T ss_pred ccccccceEEecC--CCCCCCCcCCccCCCCeEEEeecC-C----CCCceEEEEeCCCcchhhcCCCCCCccccCCCCeE
Confidence 9999987665422 223456799999999999998732 2 35779999999999999998765432222358999
Q ss_pred eccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 421 RTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 421 ~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+|||+|++|+||++++.||.||+||++|++|+|.|+
T Consensus 1013 ~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eI 1048 (1140)
T PRK06814 1013 DTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAV 1048 (1140)
T ss_pred ecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHH
Confidence 999999999999999999999999999999999874
No 105
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.8e-54 Score=439.58 Aligned_cols=404 Identities=22% Similarity=0.300 Sum_probs=321.4
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCC--CceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVT--GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~--~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~ 115 (456)
.++.+++...++.+ |+.++ ++.+. .+.+||.||.++++++|.+|.+ .|+++||+|+++++|+++++++++||
T Consensus 21 ~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~-~gi~~gd~V~l~~~n~~~~~~~~lA~ 94 (579)
T PRK09192 21 PTLVEALDYAALGE----AGMNF-YDRRGQLEEALPYQTLRARAEAGARRLLA-LGLKPGDRVALIAETDGDFVEAFFAC 94 (579)
T ss_pred hhHHHHHHHhhccC----CceEE-EecCCCEEEEecHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCchhHHHHHHHH
Confidence 48999999998887 75544 44322 2679999999999999999998 89999999999999999999999999
Q ss_pred HHhCCeEecCCCCCC-------HHHHHHHhhhcCCeEEEEccchHHHHhcc--CCe-EEEEcCCchhhhhcccCCCcccc
Q 012774 116 LSLGVIISPANPVNT-------ESEISRQIQLSNPVIAFATSSVVHKLAKL--KHR-TILIDSPEFDSMTMSWNSKHELD 185 (456)
Q Consensus 116 ~~~G~~~v~l~~~~~-------~~~l~~~l~~~~~~~vi~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~ 185 (456)
+++|++++|+++..+ .+++.++++.++++++++++.....+... ... .... .+..+...... ...
T Consensus 95 ~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~ 169 (579)
T PRK09192 95 QYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNPLLHVL---SHAWFKALPEA--DVA 169 (579)
T ss_pred HHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhcccccccee---ehhhhcccCCC--ccc
Confidence 999999999986443 58999999999999999998776555432 111 1111 12222211111 111
Q ss_pred ccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhcc-CCCCCCCCcEEEEecchhhHhhHH-HHHHHhHhcceEE
Q 012774 186 RAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFA-SSPKRVSPAVMLFTMPYFHIYGLF-FCFRAAALMETAV 263 (456)
Q Consensus 186 ~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~g~~-~~~~~l~~G~~~~ 263 (456)
.....++++++++|||||||.||+|.++|+++..+...... .+ +..++|+++.++|++|.+++. .++.++..|++++
T Consensus 170 ~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~-~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~ 248 (579)
T PRK09192 170 LPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGL-KVRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVD 248 (579)
T ss_pred cCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcc-cCCCCCeEEEeCCCCCcchhHHHHHHHHHhCCeeE
Confidence 22346689999999999999999999999999988776666 45 678899999999999999985 4556788888887
Q ss_pred EecC----CCHHHHHHHHHHhcceeEEecHHHHHHHhcCCC---CCCCCCCCceEEEecCCCCCHHHHHHHHHhCC--C-
Q 012774 264 VMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS---TDGYDLSSLETVACGAAPLGKDTIMAFASKFP--K- 333 (456)
Q Consensus 264 ~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~--~- 333 (456)
+.+. .++..+++.+.++++++++.+|..+..+..... ....+++++|.+++||+++++++.+.+.+.++ +
T Consensus 249 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~ 328 (579)
T PRK09192 249 YLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMIRPDVLHQFAEAFAPAGF 328 (579)
T ss_pred eeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCccCCHHHHHHHHHHHHhcCC
Confidence 7652 368899999999999987776655555443221 22356889999999999999999999998763 1
Q ss_pred --CceEeccCccccccccccccCCCC--------------------------CCCCCccccccCCcEEEEEcCCCCCCCC
Q 012774 334 --VVLVQAYGLTESTAGVFRTVGPDE--------------------------CRRWGSTGRLSAGLEAKIVDPETGDSLP 385 (456)
Q Consensus 334 --~~i~~~yG~tE~~~~~~~~~~~~~--------------------------~~~~~~~G~~~~~~~~~i~d~~~~~~~~ 385 (456)
..+++.||+||++..++....... .....++|+|+|+++++|+| ++++.++
T Consensus 329 ~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~d-~~~~~~~ 407 (579)
T PRK09192 329 DDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIRN-EAGMPLP 407 (579)
T ss_pred ChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEEC-CCCCCCC
Confidence 358999999999766543221100 00124789999999999999 6688899
Q ss_pred CCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 386 PGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 386 ~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
.|+.|||+++|+.++.||+++ ..+.+.+..++||+|||+|++ ++|+++++||.||+||++|++|+|.|+
T Consensus 408 ~g~~Gel~i~g~~~~~gY~~~-~~~~~~~~~dgw~~TGDlg~~-~~G~l~~~GR~dd~i~~~G~~v~p~eI 476 (579)
T PRK09192 408 ERVVGHICVRGPSLMSGYFRD-EESQDVLAADGWLDTGDLGYL-LDGYLYITGRAKDLIIINGRNIWPQDI 476 (579)
T ss_pred CCCEEEEEecCCchhhhhcCC-ccccccccCCceeeccceeeE-ECCEEEEEeccccEEEECCCccCHHHH
Confidence 999999999999999999999 667777778999999999999 999999999999999999999999874
No 106
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.2e-54 Score=400.46 Aligned_cols=410 Identities=26% Similarity=0.320 Sum_probs=335.9
Q ss_pred CCCCCHHHHhhhcccCCCCCCCCCcEEEEC----------CCC-----------ceecHHHHHHHHHHHHHHhHhhcCCC
Q 012774 35 DAPISAVDYVSSLRATLPWRDDDTVALINS----------VTG-----------LRVSFSEFTRRTNSLASYLQNVTRLS 93 (456)
Q Consensus 35 ~~~~~~~~~l~~~~~~~~~~~p~~~A~~~~----------~~~-----------~~~Ty~eL~~~~~~~a~~L~~~~gi~ 93 (456)
+..-|+++++.+..+++ .++.++-.- .+| +.+||.|+.+++.++|++|.+ +|++
T Consensus 38 ~g~~Tl~~~~~~~~~k~----g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~-lG~k 112 (678)
T KOG1180|consen 38 PGASTLYELFEECVKKF----GKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLVK-LGLK 112 (678)
T ss_pred CCcccHHHHHHHHHHhc----CCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHHH-hCCC
Confidence 55679999999999999 788876310 011 469999999999999999999 9999
Q ss_pred CCCE-EEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-----CC-eEEEE
Q 012774 94 KNDT-AFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KH-RTILI 166 (456)
Q Consensus 94 ~gd~-V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-----~~-~~~~~ 166 (456)
+++. |+|+++.+.+|..+.+||++.+..+|.+...+..+.+.|-|.++++..+|++.+.+.++... .+ .+|..
T Consensus 113 ~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~~vk~II~~ 192 (678)
T KOG1180|consen 113 PKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAKTVKHIIYF 192 (678)
T ss_pred CCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccCceeEEEEe
Confidence 7777 99999999999999999999999999999999999999999999999999999998876521 12 23444
Q ss_pred cCC--------------------chhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhcc
Q 012774 167 DSP--------------------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFA 226 (456)
Q Consensus 167 ~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~ 226 (456)
+.- +++++...+... ..++.++.++|+|+|+|||||||.||||+++|.|+++.+.....
T Consensus 193 d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~-~~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~ 271 (678)
T KOG1180|consen 193 DPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKEN-EIPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGE 271 (678)
T ss_pred cCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcC-CCCCCCCCCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhcc
Confidence 421 133333333222 12334457899999999999999999999999999999999999
Q ss_pred CCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEecCCCHHH--------HHHHHHHhcceeEEecHHHHHHHhcC
Q 012774 227 SSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKM--------MLKAVEEFRVTHAAVTPPIVVAMSKG 298 (456)
Q Consensus 227 ~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~--------~~~~i~~~~~t~~~~~P~~~~~l~~~ 298 (456)
..+.+.+.|+++.++|+.|++.+.+-+.+++-|+.+-..+..+... .-..+...+||++.++|.+++++.+.
T Consensus 272 ~v~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKg 351 (678)
T KOG1180|consen 272 NVPELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKG 351 (678)
T ss_pred cCcccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHHHHHHHH
Confidence 8888899999999999999999998899999999988775322111 11234568999999999999877543
Q ss_pred CCCC-----------------------CCC-------------------CCCceEEEecCCCCCHHHHHHHHHhCCCCce
Q 012774 299 GSTD-----------------------GYD-------------------LSSLETVACGAAPLGKDTIMAFASKFPKVVL 336 (456)
Q Consensus 299 ~~~~-----------------------~~~-------------------l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i 336 (456)
...+ ..+ =.++|++++||++++++..+.+.-.+ .+++
T Consensus 352 Vl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~-C~Pv 430 (678)
T KOG1180|consen 352 VLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICF-CCPV 430 (678)
T ss_pred HHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhc-cccc
Confidence 2100 000 04789999999999999999988888 7899
Q ss_pred EeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCC--cceEEEecCCcccccCCCcccccccc
Q 012774 337 VQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGK--EGELSIRGPTIMKGYVGEPEVTSATL 414 (456)
Q Consensus 337 ~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~--~Gel~i~g~~~~~gy~~~~~~~~~~~ 414 (456)
.++||.||+++.++.. +..+...+.+|.|++.++++++|-+++.-.+.+. .|||+|+|+++..||+++++.|++.|
T Consensus 431 ~qGYGLTEtca~~tv~--e~~d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY~kn~ekT~e~f 508 (678)
T KOG1180|consen 431 LQGYGLTETCAAATVL--EPEDFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGYYKNEEKTKEDF 508 (678)
T ss_pred cccccccchhcccEec--ChhhcccccccCCccceEEEEEEhhhcCccCCCCCCCceEEecCCccChhhhCChhhhhhhc
Confidence 9999999998877653 3344566899999999999999966665444443 79999999999999999999999999
Q ss_pred CC-CC--eeeccceEEEccCCcEEEecccccceee-CCeeecC
Q 012774 415 LP-DG--WMRTGDLCYIDEDGFLFIVDRLKDLIKY-KGYQVLP 453 (456)
Q Consensus 415 ~~-~g--~~~TGDl~~~~~dg~l~~~GR~~d~ik~-~G~~v~p 453 (456)
.. +| ||+|||+|.+++||.|.|++|++|++|. +|+-|+.
T Consensus 509 t~~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL 551 (678)
T KOG1180|consen 509 TVEDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISL 551 (678)
T ss_pred eecCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeeh
Confidence 87 88 9999999999999999999999999998 6998874
No 107
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3e-53 Score=429.04 Aligned_cols=403 Identities=24% Similarity=0.318 Sum_probs=326.3
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
+|+.+++.+.++++ |+++|+++. ++.+||.||.++++++|+.|.+ .|+++||+|+++++|+++++++++||++
T Consensus 3 ~~l~~~~~~~a~~~----p~~~a~~~~--~~~~ty~el~~~~~~la~~L~~-~g~~~~~~v~v~~~n~~~~~~~~~a~~~ 75 (533)
T PRK07798 3 WNIADLFEAVADAV----PDRVALVCG--DRRLTYAELEERANRLAHYLIA-QGLGPGDHVGIYARNRIEYVEAMLGAFK 75 (533)
T ss_pred ccHHHHHHHHHHhC----CCceEEEEC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHh
Confidence 68999999999999 999999997 8899999999999999999998 8999999999999999999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-----CC-eEEEEcCC----------chhhhhcccCCC
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-----KH-RTILIDSP----------EFDSMTMSWNSK 181 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-----~~-~~~~~~~~----------~~~~~~~~~~~~ 181 (456)
+|++++|+++.++.+++.++++.++++++++++.....+.+. .. .++.++.. .++++......
T Consensus 76 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 154 (533)
T PRK07798 76 ARAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGNDLLPGAVDYEDALAAGSP- 154 (533)
T ss_pred cCeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCcccccCCccccHHHHHhccCC-
Confidence 999999999999999999999999999999998766555432 11 23333321 23333222111
Q ss_pred ccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCC--------------CCCCCCcEEEEecchhhHh
Q 012774 182 HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--------------PKRVSPAVMLFTMPYFHIY 247 (456)
Q Consensus 182 ~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~--------------~~~~~~~~~~~~~p~~~~~ 247 (456)
... ......+.++++|||||||.||+|+++|+++..........+ .....+++++..+|++|..
T Consensus 155 -~~~-~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~ 232 (533)
T PRK07798 155 -ERD-FGERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLMHGA 232 (533)
T ss_pred -cCC-CCCCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecchhhhh
Confidence 111 112233457899999999999999999999876554322211 0114668999999999999
Q ss_pred hHHHHHHHhHhcceEEEec--CCCHHHHHHHHHHhcceeEEecHHHHH-HHhcCCC-CCCCCCCCceEEEecCCCCCHHH
Q 012774 248 GLFFCFRAAALMETAVVMQ--RFDLKMMLKAVEEFRVTHAAVTPPIVV-AMSKGGS-TDGYDLSSLETVACGAAPLGKDT 323 (456)
Q Consensus 248 g~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~-~l~~~~~-~~~~~l~~lr~v~~gG~~~~~~~ 323 (456)
++..++.++..|+++++.+ .+++..+++.++++++|.+.++|..+. .+.+... ....+++++|.+++||+++++++
T Consensus 233 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~~~~~ 312 (533)
T PRK07798 233 GQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGALFSPSV 312 (533)
T ss_pred hHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCCCCCHHH
Confidence 9988999999999999998 789999999999999999999986553 3333322 23456789999999999999999
Q ss_pred HHHHHHhCCCCceEeccCccccccccccccCCCCCCCCCccc--cccCCcEEEEEcCCCCCCCCCCCc--ceEEEecCCc
Q 012774 324 IMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTG--RLSAGLEAKIVDPETGDSLPPGKE--GELSIRGPTI 399 (456)
Q Consensus 324 ~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G--~~~~~~~~~i~d~~~~~~~~~g~~--Gel~i~g~~~ 399 (456)
.+++.+.+++..+++.||+||++.+...... .. ....| .+.++..++|++ +++++++.|+. |+|+ .++.+
T Consensus 313 ~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~-~~---~~~~g~~~~~~~~~~~i~~-~~~~~~~~g~~~~g~l~-~~~~~ 386 (533)
T PRK07798 313 KEALLELLPNVVLTDSIGSSETGFGGSGTVA-KG---AVHTGGPRFTIGPRTVVLD-EDGNPVEPGSGEIGWIA-RRGHI 386 (533)
T ss_pred HHHHHHHcCCCeEEeeecccccccccccCCC-CC---CccCCCCccCCCceEEEEC-CCCCCCCCCCCCeeEEE-eecCc
Confidence 9999999888999999999999765543211 11 12333 788999999999 66778998877 6665 55678
Q ss_pred ccccCCCccccccccCC---CCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 400 MKGYVGEPEVTSATLLP---DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 400 ~~gy~~~~~~~~~~~~~---~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+.||++++..+.+.|.. ++||+|||++++|+||++++.||.||+||++|++|+|.||
T Consensus 387 ~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eI 446 (533)
T PRK07798 387 PLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEV 446 (533)
T ss_pred cccccCChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHH
Confidence 99999999998888743 3599999999999999999999999999999999999874
No 108
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.9e-53 Score=426.30 Aligned_cols=385 Identities=27% Similarity=0.371 Sum_probs=318.0
Q ss_pred cEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHh
Q 012774 59 VALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQI 138 (456)
Q Consensus 59 ~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l 138 (456)
.|+++. ++.+||.||.++++++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++++++..+.+++.+++
T Consensus 3 ~~~~~~--~~~~Ty~el~~~~~~la~~l~~-~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l 79 (509)
T PRK12406 3 ATIISG--DRRRSFDELAQRAARAAGGLAA-LGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYIL 79 (509)
T ss_pred eEEEEC--CeeecHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHH
Confidence 367766 7899999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred hhcCCeEEEEccchHHHHhcc---CCeEEEEcCC---------------------chhhhhcccCCCccccccCCCCCCE
Q 012774 139 QLSNPVIAFATSSVVHKLAKL---KHRTILIDSP---------------------EFDSMTMSWNSKHELDRAKVCQSDV 194 (456)
Q Consensus 139 ~~~~~~~vi~~~~~~~~~~~~---~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (456)
+.+++++++++......+... ....+..... ++++.... .........+++
T Consensus 80 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 154 (509)
T PRK12406 80 EDSGARVLIAHADLLHGLASALPAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQ-----QEPYDGPPVPQP 154 (509)
T ss_pred hccCCcEEEEccchhhhhhhhhhcccceeecccccccccccccccccccCCCCccCHHHHhcc-----cCccCCCCCCCc
Confidence 999999999988766654321 1112211110 01111100 011122356889
Q ss_pred EEEEcCCCCCCCCchhcccHHHH---HHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEecCCCHH
Q 012774 195 AAIMYSSGTTGRVKGVMLTHRNL---TAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLK 271 (456)
Q Consensus 195 a~i~~TSGtTG~PK~V~~th~~l---~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~ 271 (456)
++++|||||||.||+|.++|... ..........+ +...++++++.+|++|..+....+.++..|+++++.+.++++
T Consensus 155 a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 233 (509)
T PRK12406 155 QSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIY-GLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQPRFDPE 233 (509)
T ss_pred eEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhc-CCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEccCCCHH
Confidence 99999999999999999876543 33333333344 567889999999999988876667778899999998888999
Q ss_pred HHHHHHHHhcceeEEecHHHHHHHhcCCC--CCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCcccccccc
Q 012774 272 MMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGV 349 (456)
Q Consensus 272 ~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~ 349 (456)
.+++.++++++|++.++|+++..|++... ....+++++|.++.||+++++++++++.+.+ +..+++.||+||++.++
T Consensus 234 ~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~ 312 (509)
T PRK12406 234 ELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWW-GPVIYEYYGSTESGAVT 312 (509)
T ss_pred HHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHc-CCcEEeeccccccCceE
Confidence 99999999999999999999999987543 2345678999999999999999999999988 78899999999998765
Q ss_pred ccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCccc-ccCCCccccccccCCCCeeeccceEEE
Q 012774 350 FRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMK-GYVGEPEVTSATLLPDGWMRTGDLCYI 428 (456)
Q Consensus 350 ~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~-gy~~~~~~~~~~~~~~g~~~TGDl~~~ 428 (456)
+... .+....++++|.|+++++++++| +++++++.|+.|||+++|++++. ||+++++.+...+ .++||+|||+|++
T Consensus 313 ~~~~-~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~-~~~~~~TGD~~~~ 389 (509)
T PRK12406 313 FATS-EDALSHPGTVGKAAPGAELRFVD-EDGRPLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEID-RGGFITSGDVGYL 389 (509)
T ss_pred ecCc-ccccccCCCcCccCCCcEEEEEC-CCCCCCCCCCceEEEEECCccccccccCCchhccccc-CCCCeEEccEEEE
Confidence 5432 22233557899999999999999 67899999999999999998875 9999998887766 6899999999999
Q ss_pred ccCCcEEEecccccceeeCCeeecCCCC
Q 012774 429 DEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 429 ~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
++||++++.||.||+||++|++|+|.|+
T Consensus 390 ~~~g~~~~~GR~~d~ik~~G~~v~~~~I 417 (509)
T PRK12406 390 DADGYLFLCDRKRDMVISGGVNIYPAEI 417 (509)
T ss_pred cCCceEEEeecccceEEECCEEECHHHH
Confidence 9999999999999999999999999874
No 109
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.2e-53 Score=426.53 Aligned_cols=386 Identities=29% Similarity=0.396 Sum_probs=319.3
Q ss_pred EEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhh
Q 012774 60 ALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQ 139 (456)
Q Consensus 60 A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~ 139 (456)
|++....++.+||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++|+++..+.+++.++++
T Consensus 2 ~~~~~~~~~~~ty~el~~~v~~~a~~L~~-~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~ 80 (502)
T PRK08276 2 AVIMAPSGEVVTYGELEARSNRLAHGLRA-LGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVD 80 (502)
T ss_pred ceEecCCCcEEEHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHh
Confidence 44444448999999999999999999999 89999999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEEEccchHHHHhcc------CCeEEEEcCC------chhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCC
Q 012774 140 LSNPVIAFATSSVVHKLAKL------KHRTILIDSP------EFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRV 207 (456)
Q Consensus 140 ~~~~~~vi~~~~~~~~~~~~------~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~P 207 (456)
..+++++++++.....+... ..+.+.+... .+++.... .........++.++++|||||||.|
T Consensus 81 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGtTG~P 155 (502)
T PRK08276 81 DSGAKVLIVSAALADTAAELAAELPAGVPLLLVVAGPVPGFRSYEEALAA-----QPDTPIADETAGADMLYSSGTTGRP 155 (502)
T ss_pred cCCCCEEEEccchhhHHHHHhhhccccccEEEEeCCCCCccccHHHHHhc-----CCCCCCCCCCcceEEEECCCCCCCC
Confidence 99999999998776654321 2222222211 12222111 1111223456789999999999999
Q ss_pred chhcccHHHHHHHH------HHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEecCCCHHHHHHHHHHhc
Q 012774 208 KGVMLTHRNLTAAV------ASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFR 281 (456)
Q Consensus 208 K~V~~th~~l~~~~------~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~ 281 (456)
|+|.++|.++.... ....... ....++++++.+|++|.+++...+.++..|+++++.+.+++..+++.+++++
T Consensus 156 K~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~ 234 (502)
T PRK08276 156 KGIKRPLPGLDPDEAPGMMLALLGFGM-YGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEKFDAEEALALIERYR 234 (502)
T ss_pred ceEEEccCCcchhhhhHHhhhhhhhcc-cCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCCCCHHHHHHHHHHhC
Confidence 99999887654322 1122222 2346789999999999999877778999999999998899999999999999
Q ss_pred ceeEEecHHHHHHHhcCCCC--CCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccCCCCCC
Q 012774 282 VTHAAVTPPIVVAMSKGGST--DGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECR 359 (456)
Q Consensus 282 ~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~ 359 (456)
+|++.++|+++..+++.... ...+++++|.+++||++++.++++++.+.+ +..+++.||+||++.+++... .....
T Consensus 235 ~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~-~~~~~ 312 (502)
T PRK08276 235 VTHSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWW-GPIIHEYYASSEGGGVTVITS-EDWLA 312 (502)
T ss_pred CeEEEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHh-CcHhhhhcccccccceeEecC-ccccc
Confidence 99999999999999876532 345688999999999999999999999988 788999999999987554422 22234
Q ss_pred CCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEecc
Q 012774 360 RWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDR 439 (456)
Q Consensus 360 ~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR 439 (456)
..+++|+|+ +..++|+| +++.+++.|+.|||+++|+.++.||+++++.+.+.+.+++||+|||+|+++++|.+++.||
T Consensus 313 ~~~~~G~~~-~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR 390 (502)
T PRK08276 313 HPGSVGKAV-LGEVRILD-EDGNELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDEDGYLYLTDR 390 (502)
T ss_pred cCCCcceec-ccEEEEEC-CCCCCCcCCCceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEcCCcCEEEecc
Confidence 557899999 88999999 6688999999999999999999999999999999997779999999999999999999999
Q ss_pred cccceeeCCeeecCCCC
Q 012774 440 LKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 440 ~~d~ik~~G~~v~p~e~ 456 (456)
.||+||++|++|+|.|+
T Consensus 391 ~~~~i~~~G~~v~~~~i 407 (502)
T PRK08276 391 KSDMIISGGVNIYPQEI 407 (502)
T ss_pred CcceEEeCCEEeCHHHH
Confidence 99999999999999764
No 110
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5e-53 Score=449.74 Aligned_cols=397 Identities=16% Similarity=0.184 Sum_probs=309.9
Q ss_pred CCCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHH
Q 012774 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (456)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~ 116 (456)
.+|+.+++.+.++++ |+++|+++. ++++||+||.++++++|+.|.+ .|+++||+|+|+++|+++++++++||+
T Consensus 446 ~~sl~~ll~~~a~~~----pd~~Al~~~--~~~lTY~eL~~ra~rlA~~L~~-~Gv~~Gd~VaI~~~n~~e~v~a~lA~~ 518 (994)
T PRK07868 446 RISLGRIIAEQARDA----PKGEFLLFD--GRVHTYEAVNRRINNVVRGLIA-VGVRQGDRVGVLMETRPSALVAIAALS 518 (994)
T ss_pred CccHHHHHHHHHHHC----CCCeEEEeC--CceeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 379999999999999 999999987 7899999999999999999998 899999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhccCCeEEEEcCCc--------hhhhhcc---cCCCcccc
Q 012774 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPE--------FDSMTMS---WNSKHELD 185 (456)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~---~~~~~~~~ 185 (456)
++|++++|++|. +++.++++.++++++|++++....+.....++++++... ....... .......+
T Consensus 519 ~aGav~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~~~~iiv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (994)
T PRK07868 519 RLGAVAVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQLPGRVLVLGGGESRDLDLPDDADVIDMEKIDPDAVELP 595 (994)
T ss_pred hcCCEEEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhcCceEEEecCCccccccCCcchhhhhhhhcCcccccCC
Confidence 999999999985 578999999999999999877766654444555553211 0000000 00000000
Q ss_pred ----ccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHH-HHhHhcc
Q 012774 186 ----RAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCF-RAAALME 260 (456)
Q Consensus 186 ----~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~-~~l~~G~ 260 (456)
.....++++++++|| ||||.||++.++|.+...........+ .+..+|++++.+|++|.+++...+ .++..|+
T Consensus 596 ~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~-~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~ 673 (994)
T PRK07868 596 GWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAA-ALDRRDTVYCLTPLHHESGLLVSLGGAVVGGS 673 (994)
T ss_pred cccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhc-CCCCCCeEEEecChHHHhHHHHHHHHHhccce
Confidence 011235789999998 578888888888877654444444444 577899999999999999996555 4455555
Q ss_pred eEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEecc
Q 012774 261 TAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAY 340 (456)
Q Consensus 261 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~y 340 (456)
++++.+.++++.+++.|+++++|+++++|+++..|++.......+++++|.++ |+.+++++++++.+.++++++++.|
T Consensus 674 ~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~--g~gl~~~l~~~~~~~~~~~~l~~~Y 751 (994)
T PRK07868 674 RIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFI--GSGMPTGLWERVVEAFAPAHVVEFF 751 (994)
T ss_pred EEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEe--cCCCCHHHHHHHHHHhCchheeeee
Confidence 56666789999999999999999999999999999886544445677899876 3449999999999999778999999
Q ss_pred CccccccccccccCCCCCCCCCccccccCCc-EEEEE--cC--------CCC--CCCCCCCcceEEEecCCcccccCCCc
Q 012774 341 GLTESTAGVFRTVGPDECRRWGSTGRLSAGL-EAKIV--DP--------ETG--DSLPPGKEGELSIRGPTIMKGYVGEP 407 (456)
Q Consensus 341 G~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~i~--d~--------~~~--~~~~~g~~Gel~i~g~~~~~gy~~~~ 407 (456)
|+||++..... . ...+.+++|+|++|+ +++|. |+ ++| +.++.|+.|||+++++.. + ++
T Consensus 752 G~TE~~~~~~~--~--~~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ge~Gel~~~~~~~----~-~p 822 (994)
T PRK07868 752 ATTDGQAVLAN--V--SGAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVNEVGVLLARARGP----I-DP 822 (994)
T ss_pred ecccccccccc--c--CCCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCCCceEEEEecCCC----C-Ch
Confidence 99998754332 1 123567999999998 66664 21 345 567889999999998753 3 33
Q ss_pred ccc--ccccC-CCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 408 EVT--SATLL-PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 408 ~~~--~~~~~-~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+.+ ...|. .+|||+|||+|++|+||+|+|+||+||+||++|.+|+|.||
T Consensus 823 ~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EI 874 (994)
T PRK07868 823 TASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPV 874 (994)
T ss_pred hhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHHH
Confidence 322 22242 37999999999999999999999999999999999999875
No 111
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=1.4e-53 Score=419.91 Aligned_cols=343 Identities=17% Similarity=0.197 Sum_probs=281.1
Q ss_pred eecHHHHHHHHHHHHHHhHhhcCC-CCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEE
Q 012774 69 RVSFSEFTRRTNSLASYLQNVTRL-SKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAF 147 (456)
Q Consensus 69 ~~Ty~eL~~~~~~~a~~L~~~~gi-~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 147 (456)
-+.|+||.++++++|+.|.+ .|+ ++|++|+++++|+++++++++||+++|++++|++|.++.+++.++++.+++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~-~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i 97 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQ-LATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIW 97 (452)
T ss_pred ecChHHHHHHHHHHHHHHHH-hcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEE
Confidence 46699999999999999999 887 5799999999999999999999999999999999999999999999999999999
Q ss_pred EccchHHHHhccCCeEEEEcCCchhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccC
Q 012774 148 ATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFAS 227 (456)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~ 227 (456)
++++..... .. . . ........+++.++++|||||||.||+|++||+++...+......
T Consensus 98 ~~~~~~~~~---------~~-----~----~----~~~~~~~~~~~~~~i~~TSGTTG~PKgV~~t~~~l~~~~~~~~~~ 155 (452)
T PRK07445 98 GLDQLKLSH---------PP-----P----L----PSQGILPNLETGWIMIPTGGSSGQIRFAIHTWETLTASVQGFQRY 155 (452)
T ss_pred ecCcccccc---------CC-----C----C----CccccCCCCCCcEEEEeCCCCCCCCcEEEechHHHHHHHHHHHHH
Confidence 876532110 00 0 0 000112356889999999999999999999999998877766655
Q ss_pred CCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCC
Q 012774 228 SPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLS 307 (456)
Q Consensus 228 ~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~ 307 (456)
+ ...+ ++.++++|++|.+|+..++.++..|+++++.+..+.........++++++++++|+++..+++.. ...++
T Consensus 156 ~-~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~~~~vP~~l~~l~~~~---~~~l~ 230 (452)
T PRK07445 156 F-QLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFFLSLVPTQLQRLLQLR---PQWLA 230 (452)
T ss_pred h-cCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccchhhhhhhcCceEEEehHHHHHHHHhhC---hhhhh
Confidence 5 3433 46788999999999988889999999999886432222234445788999999999999998632 23478
Q ss_pred CceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCC
Q 012774 308 SLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPG 387 (456)
Q Consensus 308 ~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g 387 (456)
++|.+++||+++++++.+.+++. ++++++.||+||++..+......+......++|+|+|+++++|+ .|
T Consensus 231 ~l~~i~~gG~~l~~~~~~~~~~~--~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p~~~v~i~---------~g 299 (452)
T PRK07445 231 QFRTILLGGAPAWPSLLEQARQL--QLRLAPTYGMTETASQIATLKPDDFLAGNNSSGQVLPHAQITIP---------AN 299 (452)
T ss_pred cceEEEECCccCCHHHHHHHHhc--CCeEecCcchhhhcccccccCchhhccCCCcCCccCCCCeEEEc---------CC
Confidence 99999999999999999988764 88999999999997654432211112245689999999999997 35
Q ss_pred CcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 388 KEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 388 ~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+.|||+|+|+.++.||++++. ..+|||+|||+|++|+||++++.||.||+||++|+||+|.||
T Consensus 300 ~~Gel~v~g~~~~~gY~~~~~------~~~g~~~TGDl~~~d~dG~l~~~GR~dd~I~~~G~~V~p~eI 362 (452)
T PRK07445 300 QTGNITIQAQSLALGYYPQIL------DSQGIFETDDLGYLDAQGYLHILGRNSQKIITGGENVYPAEV 362 (452)
T ss_pred CcceEEEeCCccchhhcCCcc------CCCCEEECCCEEEEcCCCCEEEEeecCCEEEECCEEECHHHH
Confidence 679999999999999997532 247899999999999999999999999999999999999874
No 112
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-52 Score=424.96 Aligned_cols=401 Identities=23% Similarity=0.332 Sum_probs=321.4
Q ss_pred CHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHh
Q 012774 39 SAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSL 118 (456)
Q Consensus 39 ~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~ 118 (456)
++.+.+...+..+ |+.+|+.+.+.++.+||.||.++++++|+.|.+ .|+++||+|+|+++|+++++++++||+++
T Consensus 3 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~-~g~~~gd~V~l~~~~~~~~~~~~la~~~~ 77 (545)
T PRK07768 3 RFTEKMYANARTS----PRGMVTGEPDAPVRHTWGEVHERARRIAGGLAA-AGVGPGDAVAVLAGAPVEIAPTAQGLWMR 77 (545)
T ss_pred hHHHHHHHHhhCC----CcceEEecCCCceEecHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCchHHHHHHHHHHHc
Confidence 5788888888888 999999887667899999999999999999999 89999999999999999999999999999
Q ss_pred CCeEecCCCCCCHHH-------HHHHhhhcCCeEEEEccchHHHHhcc---CCeEEEEcCCchhhhhcccCCCccccccC
Q 012774 119 GVIISPANPVNTESE-------ISRQIQLSNPVIAFATSSVVHKLAKL---KHRTILIDSPEFDSMTMSWNSKHELDRAK 188 (456)
Q Consensus 119 G~~~v~l~~~~~~~~-------l~~~l~~~~~~~vi~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (456)
|++++++++..+.++ +..+++.++++++++++......... ...++ .++++..... .....
T Consensus 78 g~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~~----~~~~~ 148 (545)
T PRK07768 78 GASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEEKGIRVL-----TVADLLAADP----IDPVE 148 (545)
T ss_pred CccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhcccCCcee-----ehhhhcccCC----CCcCC
Confidence 999999998877544 44567788999999987654433221 11121 2233322111 12234
Q ss_pred CCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCC-cEEEEecchhhHhhHH-HHHHHhHhcceEEEec
Q 012774 189 VCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSP-AVMLFTMPYFHIYGLF-FCFRAAALMETAVVMQ 266 (456)
Q Consensus 189 ~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~g~~-~~~~~l~~G~~~~~~~ 266 (456)
..++++++++|||||||.||+|+++|+++........... +.... |++++++|++|..++. .++.++..|+++++.+
T Consensus 149 ~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~-~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~ 227 (545)
T PRK07768 149 TGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAA-EFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVT 227 (545)
T ss_pred CCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhc-CCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeC
Confidence 5678999999999999999999999999988877666665 45554 8999999999999984 4667899999988875
Q ss_pred C----CCHHHHHHHHHHhcceeEEecHHHHHHHhcCC----CCCCCCCCCceEEEecCCCCCHHHHHHHHHh---C--CC
Q 012774 267 R----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGG----STDGYDLSSLETVACGAAPLGKDTIMAFASK---F--PK 333 (456)
Q Consensus 267 ~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~----~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~---~--~~ 333 (456)
. .++..+++.+++++++++..+|..+..+.+.. .....+++++|.++++|+++++++.+.+.+. + +.
T Consensus 228 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~g~~~ 307 (545)
T PRK07768 228 PMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADVEDLLDAGARFGLRP 307 (545)
T ss_pred HHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCCHHHHHHHHHHHHhcCCCc
Confidence 3 37788999999999999988887776665432 1224568899999999999999999999874 3 22
Q ss_pred CceEeccCccccccccccccCCC------------------------CCCCCCccccccCCcEEEEEcCCCCCCCCCCCc
Q 012774 334 VVLVQAYGLTESTAGVFRTVGPD------------------------ECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKE 389 (456)
Q Consensus 334 ~~i~~~yG~tE~~~~~~~~~~~~------------------------~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~ 389 (456)
..+++.||+||++..+....... .....+++|+|+++++++|+| ++++.++.|+.
T Consensus 308 ~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~-~~~~~~~~g~~ 386 (545)
T PRK07768 308 EAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVD-EDGQVLPPRGV 386 (545)
T ss_pred ccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEEC-CCCCCCCCCCE
Confidence 35999999999987554321110 011335799999999999999 77899999999
Q ss_pred ceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 390 GELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 390 Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
|||+++|+.++.||++.+.... .+..+|||+|||+|++++||+++++||.||+||++|++|+|.|+
T Consensus 387 Gel~v~~~~~~~gy~~~~~~~~-~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~ei 452 (545)
T PRK07768 387 GVIELRGESVTPGYLTMDGFIP-AQDADGWLDTGDLGYLTEEGEVVVCGRVKDVIIMAGRNIYPTDI 452 (545)
T ss_pred EEEEEccCcccccccCCCCCcc-cccCCCeeeccceEEEecCCEEEEEccccceEEECCEecCHHHH
Confidence 9999999999999998654433 33467899999999999999999999999999999999999764
No 113
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.1e-52 Score=416.34 Aligned_cols=359 Identities=21% Similarity=0.268 Sum_probs=302.8
Q ss_pred hcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecC
Q 012774 46 SLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPA 125 (456)
Q Consensus 46 ~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l 125 (456)
..+.++ |+++|+++. ++.+||+||.++++++|..|.+ .|+.+||+|+++++|+++++++++||+++|++++|+
T Consensus 11 ~~a~~~----~~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~-~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~~ 83 (458)
T PRK09029 11 HWAQVR----PQAIALRLN--DEVLTWQQLCARIDQLAAGFAQ-QGVVEGSGVALRGKNSPETLLAYLALLQCGARVLPL 83 (458)
T ss_pred HHHHhC----CCceeeecC--CcceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEeec
Confidence 346667 999999987 8899999999999999999999 899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHhhhcCCeEEEEccchHHHHhccCCeEEEEcCCchhhhhcccCCCccccccCCCCCCEEEEEcCCCCCC
Q 012774 126 NPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTG 205 (456)
Q Consensus 126 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG 205 (456)
++..+.+++..+++.+++++++++++... +.... ... .. . . .........++++++++|||||||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~--~~~-----~~---~--~--~~~~~~~~~~~~~a~i~~TSGTTG 148 (458)
T PRK09029 84 NPQLPQPLLEELLPSLTLDFALVLEGENT-FSALT--SLH-----LQ---L--V--EGAHAVAWQPQRLATMTLTSGSTG 148 (458)
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEcCcccc-hhhcc--ccc-----cc---c--c--cccCcccCCCCCeEEEEECCCCCC
Confidence 99999999999999999999998866432 11110 000 00 0 0 011122346788999999999999
Q ss_pred CCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEecCCCHHHHHHHHHHhcceeE
Q 012774 206 RVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHA 285 (456)
Q Consensus 206 ~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~ 285 (456)
.||+|.++|+++..........+ ....+++++..+|++|.+++..++.++..|+++++.+. ..+++.+. ++|.+
T Consensus 149 ~PKgv~~s~~~~~~~~~~~~~~~-~~~~~~~~l~~~p~~h~~g~~~~~~~l~~G~~v~~~~~---~~~~~~i~--~~t~~ 222 (458)
T PRK09029 149 LPKAAVHTAQAHLASAEGVLSLM-PFTAQDSWLLSLPLFHVSGQGIVWRWLYAGATLVVRDK---QPLEQALA--GCTHA 222 (458)
T ss_pred CCCEEEEeHHHHHHHHHHHhhcC-CCCccceEEEecCcHhhhhhHHHHHHHhCCceEEeCCh---HHHHHHHh--hceee
Confidence 99999999999999888777776 67888999999999999998777788999999998764 45667774 78999
Q ss_pred EecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccCCCCCCCCCccc
Q 012774 286 AVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTG 365 (456)
Q Consensus 286 ~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G 365 (456)
..+|+++..+...... ..++|.+++||+++++++.+.+.+. +.++++.||+||++...+.... ....++|
T Consensus 223 ~~~P~~~~~l~~~~~~----~~~l~~i~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~~~~~~----~~~~~~G 292 (458)
T PRK09029 223 SLVPTQLWRLLDNRSE----PLSLKAVLLGGAAIPVELTEQAEQQ--GIRCWCGYGLTEMASTVCAKRA----DGLAGVG 292 (458)
T ss_pred ecChHHHHHHHhcccc----CCcceEEEECCCCCCHHHHHHHHHc--CCcEeccccccccCcceeccCC----CCCCCCC
Confidence 9999999998876432 3479999999999999999998875 8999999999999865443211 1235699
Q ss_pred cccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEeccccccee
Q 012774 366 RLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIK 445 (456)
Q Consensus 366 ~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik 445 (456)
+|+++++++|++ |||+++|+.++.||+++++.+.... .+|||+|||+|++| ||++++.||.||+||
T Consensus 293 ~~~~~~~~~i~~------------gel~v~g~~~~~gY~~~~~~~~~~~-~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~ 358 (458)
T PRK09029 293 SPLPGREVKLVD------------GEIWLRGASLALGYWRQGQLVPLVN-DEGWFATRDRGEWQ-NGELTILGRLDNLFF 358 (458)
T ss_pred CCCCCCEEEEeC------------CEEEEecCceeeeeecCcccccccc-CCCccCCCCcEEEe-CCEEEEeccccccee
Confidence 999999999987 8999999999999999988776543 58999999999999 999999999999999
Q ss_pred eCCeeecCCCC
Q 012774 446 YKGYQVLPLLN 456 (456)
Q Consensus 446 ~~G~~v~p~e~ 456 (456)
++|++|+|.|+
T Consensus 359 ~~G~~v~p~ei 369 (458)
T PRK09029 359 SGGEGIQPEEI 369 (458)
T ss_pred eCCEEeCHHHH
Confidence 99999999874
No 114
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=3.5e-52 Score=416.37 Aligned_cols=351 Identities=18% Similarity=0.218 Sum_probs=272.6
Q ss_pred cCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccch---------HHHHhc-cCCeEEEEcC---
Q 012774 102 STNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSV---------VHKLAK-LKHRTILIDS--- 168 (456)
Q Consensus 102 ~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~-~~~~~~~~~~--- 168 (456)
++|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++.. ...+.. .....+++..
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 589999999999999999999999999999999999999999999998642 111111 1112222210
Q ss_pred ----------CchhhhhcccCC-----CccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCC
Q 012774 169 ----------PEFDSMTMSWNS-----KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVS 233 (456)
Q Consensus 169 ----------~~~~~~~~~~~~-----~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~ 233 (456)
..+.++...... ..........++++++++|||||||.||+|++||+++..........+ ....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~-~~~~ 159 (499)
T PLN03051 81 PVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHM-DIQP 159 (499)
T ss_pred ccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhc-CCCC
Confidence 123333211000 000111122458999999999999999999999999877665544444 5678
Q ss_pred CcEEEEecchhhHhhHHHHHHHhHhcceEEEecC-CCHHHHHHHHHHhcceeEEecHHHHHHHhcCCC--CCCCCCCCce
Q 012774 234 PAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR-FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGS--TDGYDLSSLE 310 (456)
Q Consensus 234 ~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr 310 (456)
+|++++.+|++|..++..++.++..|+++++.+. +++..+++.|+++++|++.++|+++..|++... ....+++++|
T Consensus 160 ~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~~~~~Lr 239 (499)
T PLN03051 160 GDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLDWSKLR 239 (499)
T ss_pred CCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccCCchhhe
Confidence 8999999999999998778889999999998874 788999999999999999999999999987643 3345688999
Q ss_pred EEEecCCCCCHHHHHHHHHhCC-CCceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCC--
Q 012774 311 TVACGAAPLGKDTIMAFASKFP-KVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPG-- 387 (456)
Q Consensus 311 ~v~~gG~~~~~~~~~~~~~~~~-~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g-- 387 (456)
.+++||+++++++.+++++.++ +.++++.||+||++....... .......+++|+|.++++++|+| +++++++.|
T Consensus 240 ~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~-~~~~~~~~~~G~p~~~~~~~ivd-~~g~~~~~g~~ 317 (499)
T PLN03051 240 VFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISST-LLQPQAPGAFSTASLGTRFVLLN-DNGVPYPDDQP 317 (499)
T ss_pred EEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeeccc-ccCCCCCccccCCCCCceEEEEC-CCCCCCCCCCC
Confidence 9999999999999987777431 478999999999865433211 11223457899999999999999 778889888
Q ss_pred CcceEEEecCCc--ccccCCCccccccccCC--------CCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 388 KEGELSIRGPTI--MKGYVGEPEVTSATLLP--------DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 388 ~~Gel~i~g~~~--~~gy~~~~~~~~~~~~~--------~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+.|||+++|+.+ +.||++++. ++..++. .+||+|||+|++|+||+|+|+||.||+||++|+||+|.||
T Consensus 318 ~~Gel~v~g~~~~~~~gy~~~~~-~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~~v~p~EI 395 (499)
T PLN03051 318 CVGEVALAPPMLGASDRLLNADH-DKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNLGGIKTSSVEI 395 (499)
T ss_pred cceEEEEecCcCCCCccccCCcc-cceeeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEEeeCCEECCHHHH
Confidence 579999999976 579997653 3322211 1279999999999999999999999999999999999885
No 115
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=3.8e-51 Score=403.24 Aligned_cols=358 Identities=26% Similarity=0.371 Sum_probs=299.1
Q ss_pred cHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEcc
Q 012774 71 SFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (456)
Q Consensus 71 Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 150 (456)
||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++|+++..+.+.+..+++..+++++++++
T Consensus 1 Ty~~l~~~~~~~a~~l~~-~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 79 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKA-QGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDS 79 (436)
T ss_pred CHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999999 8999999999999999999999999999999999999999999999999999999999987
Q ss_pred chHHHHhccCCeEEEEcCCchhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCC
Q 012774 151 SVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPK 230 (456)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~ 230 (456)
...... +. ...+..+....... .........+++++++|||||||.||+|.++|+++...+......+ +
T Consensus 80 ~~~~~~-------~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~-~ 148 (436)
T TIGR01923 80 LLEEKD-------FQ--ADSLDRIEAAGRYE-TSLSASFNMDQIATLMFTSGTTGKPKAVPHTFRNHYASAVGSKENL-G 148 (436)
T ss_pred cccccc-------ee--ecchHhhhhccccc-ccccccCCcCceEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHhhc-C
Confidence 642111 00 01111111111100 1112234567899999999999999999999999998888877777 6
Q ss_pred CCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCce
Q 012774 231 RVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLE 310 (456)
Q Consensus 231 ~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr 310 (456)
..++|++++.+|++|..++..++.++..|+++++.+.++ .+++.++++++|++.++|+++..+++..... +++|
T Consensus 149 ~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~--~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~----~~l~ 222 (436)
T TIGR01923 149 FTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKFN--QLLEMIANERVTHISLVPTQLNRLLDEGGHN----ENLR 222 (436)
T ss_pred CCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchHH--HHHHHHHHhCCeEEEeHHHHHHHHHhCcCCC----CceE
Confidence 888999999999999999888889999999999987653 9999999999999999999999998865322 6899
Q ss_pred EEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcc
Q 012774 311 TVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEG 390 (456)
Q Consensus 311 ~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~G 390 (456)
.+++||+++++++.+.+++. +..+++.||+||++.............+ .++|+|++++++++...+. ++.|
T Consensus 223 ~~~~~G~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~-~~~G~~~~~~~~~i~~~~~------~~~G 293 (436)
T TIGR01923 223 KILLGGSAIPAPLIEEAQQY--GLPIYLSYGMTETCSQVTTATPEMLHAR-PDVGRPLAGREIKIKVDNK------EGHG 293 (436)
T ss_pred EEEECCCCCCHHHHHHHHHh--CCceeeEecCCccchhccCcCccccccc-cCCCccCCCcEEEEEeCCC------CCce
Confidence 99999999999999988875 8999999999999876554332222222 3599999999999944232 2679
Q ss_pred eEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 391 ELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 391 el~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
||+++|+.++.||+++++.+...+ .++||+|||+|++++||++++.||.||+||++|++|+|.|+
T Consensus 294 el~v~~~~~~~gy~~~~~~~~~~~-~~~~~~TGD~~~~~~dg~~~~~GR~~d~i~~~G~~v~~~~i 358 (436)
T TIGR01923 294 EIMVKGANLMKGYLYQGELTPAFE-QQGWFNTGDIGELDGEGFLYVLGRRDDLIISGGENIYPEEI 358 (436)
T ss_pred EEEEECCccchhhCCChhhhhhhh-cCCCeeccceEEEcCCCCEEEeccccCeEEeCCEeeCHHHH
Confidence 999999999999999887776655 57999999999999999999999999999999999999764
No 116
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=1.6e-49 Score=368.11 Aligned_cols=407 Identities=23% Similarity=0.288 Sum_probs=328.6
Q ss_pred CCCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHH
Q 012774 37 PISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLL 116 (456)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~ 116 (456)
..++.+++.++++++ |+++|+++.+..+++||+|+.+.++++|+.|.. .|++.||+|+|+++|.+|++.+|||++
T Consensus 76 ~~ti~~~F~~~vrr~----p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~-~~l~~GD~VAL~men~pefv~lWlGLa 150 (649)
T KOG1179|consen 76 RRTIAELFLSQVRRQ----PDKPAIIYEGPFQSLTFAELDARSNRVANYLHA-EGLKAGDVVALLMENRPEFVALWLGLA 150 (649)
T ss_pred CCcHHHHHHHHHHhC----CCccEEEEeCCCceeeHHHHHHHHHHHHHHHHH-hhcccCCEEEEecCCChhHHHHHHhHH
Confidence 379999999999999 999999998667899999999999999999999 899999999999999999999999999
Q ss_pred HhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-------CCeEEEEcCC----chhhhhcccCCCc--c
Q 012774 117 SLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-------KHRTILIDSP----EFDSMTMSWNSKH--E 183 (456)
Q Consensus 117 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-------~~~~~~~~~~----~~~~~~~~~~~~~--~ 183 (456)
++|++...||++..-+.|.|.++.++++++|++++..+.+.+. .+.+...+.. ..+++....+... +
T Consensus 151 KlGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~~~g~~~L~~~l~~~~~~~ 230 (649)
T KOG1179|consen 151 KLGVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSVPDGIESLLAKLSAAPKHP 230 (649)
T ss_pred hhCceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCCCchHHHHHHhhcccccCC
Confidence 9999999999999999999999999999999999988777644 2223333211 1333333222111 1
Q ss_pred ---ccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhH-HHHHHHhHhc
Q 012774 184 ---LDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALM 259 (456)
Q Consensus 184 ---~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G 259 (456)
.......-.++++.+|||||||.||+.+++|.............+ ++..+|+++.++|++|..+. ..+..++..|
T Consensus 231 vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~-g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~G 309 (649)
T KOG1179|consen 231 VPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVF-GMTADDVVYTTLPLYHSAAGILGIGGCLLHG 309 (649)
T ss_pred CCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHh-CCCccceEEEcchhHHHHHHHHHHHHHHhcC
Confidence 111233446789999999999999999999999877776566666 89999999999999999887 7788999999
Q ss_pred ceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEec
Q 012774 260 ETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQA 339 (456)
Q Consensus 260 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~ 339 (456)
+++++-.+|+...+|+.+.++++|++.-.--+++-|++.+......-..+|..+ |..+.+++++.|.+.|...+|.+.
T Consensus 310 aT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla~--GNGLR~diW~~Fv~RFg~~~IgE~ 387 (649)
T KOG1179|consen 310 ATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLAY--GNGLRPDIWQQFVKRFGIIKIGEF 387 (649)
T ss_pred ceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEEe--cCCCCchHHHHHHHHcCCCeEEEE
Confidence 999999999999999999999999999999999999998766555555677766 788999999999999966679999
Q ss_pred cCccccccccccccCCCCCCCCCcccc------ccCCcEEEEEcCCCCC----------CCCCCCcceEE--EecCCc--
Q 012774 340 YGLTESTAGVFRTVGPDECRRWGSTGR------LSAGLEAKIVDPETGD----------SLPPGKEGELS--IRGPTI-- 399 (456)
Q Consensus 340 yG~tE~~~~~~~~~~~~~~~~~~~~G~------~~~~~~~~i~d~~~~~----------~~~~g~~Gel~--i~g~~~-- 399 (456)
||+||...-... .+ ...|.+|+ -+--+++-=+|+++++ ++++||.|.++ |.....
T Consensus 388 YgaTEgn~~~~N-~d----~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i~~k~P~~ 462 (649)
T KOG1179|consen 388 YGATEGNSNLVN-YD----GRVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVGKIVQKNPLR 462 (649)
T ss_pred eccccCcceeee-ec----CccccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCCceEEEEeccCCchh
Confidence 999997654332 11 12233332 2222333334555654 46789999775 333344
Q ss_pred -ccccCCCccccccccCC------CCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 400 -MKGYVGEPEVTSATLLP------DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 400 -~~gy~~~~~~~~~~~~~------~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+.||.+++..+++.... |-||.|||+-.+|+.|++||.+|..|.+..+|++|+-.|+
T Consensus 463 ~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGENVsTtEV 526 (649)
T KOG1179|consen 463 SFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGENVSTTEV 526 (649)
T ss_pred hhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCcccHHHH
Confidence 88999988777766432 4499999999999999999999999999999999997764
No 117
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=3.3e-50 Score=388.98 Aligned_cols=415 Identities=22% Similarity=0.257 Sum_probs=335.6
Q ss_pred CCCCCHHHHhhhcccCCCCCCCCCcEEEECC----CCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHH
Q 012774 35 DAPISAVDYVSSLRATLPWRDDDTVALINSV----TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (456)
Q Consensus 35 ~~~~~~~~~l~~~~~~~~~~~p~~~A~~~~~----~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~ 110 (456)
....|..+.+..+..... .++.+|+++.. +...+||.|+.+++.++|..|.+ +|+++||+|++++|..+++++
T Consensus 60 g~~ln~~~n~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~-~g~~kGD~V~~~mPm~~e~~i 136 (626)
T KOG1175|consen 60 GAFLNACYNCLDRHIKEK--GGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRK-CGLKKGDTVAIYMPMIPEAVI 136 (626)
T ss_pred cchhhhhHhhhhhhhhhc--CCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHh-cCCCCCcEEEEeccCChHHHH
Confidence 455677777776653331 27888887642 22458999999999999999996 999999999999999999999
Q ss_pred HHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc-------------C------CeEEEEc----
Q 012774 111 LYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL-------------K------HRTILID---- 167 (456)
Q Consensus 111 ~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-------------~------~~~~~~~---- 167 (456)
+++||.++|++.+++....++.++...+++.+++++++.+......+.. . ...+.+.
T Consensus 137 a~lA~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 216 (626)
T KOG1175|consen 137 AMLACARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRNR 216 (626)
T ss_pred HHHHHhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecccc
Confidence 9999999999999999999999999999999999999976544322110 0 0011110
Q ss_pred CCchhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHh
Q 012774 168 SPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIY 247 (456)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 247 (456)
+..++..+..... .........+++.+|+|||||||.||++.+++....-.............++|+.++.....|+.
T Consensus 217 d~~~~~~~~~a~~--~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~ 294 (626)
T KOG1175|consen 217 DLFWSLELKKASP--EHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWIT 294 (626)
T ss_pred cccHHHHhhhcCC--CCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCeee
Confidence 1123333332221 22245567789999999999999999999999876555544444443789999999999999999
Q ss_pred hHH-HHHHHhHhcceEEEec--CCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCC--CCCCCCceEEEecCCCCCHH
Q 012774 248 GLF-FCFRAAALMETAVVMQ--RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTD--GYDLSSLETVACGAAPLGKD 322 (456)
Q Consensus 248 g~~-~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~--~~~l~~lr~v~~gG~~~~~~ 322 (456)
+.. ..+++++.|+++++.+ .+++..+++.+.++++|+++..|+.++.|.+..... .+++++||.+.++||++.++
T Consensus 295 g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi~~~ 374 (626)
T KOG1175|consen 295 GHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPINPE 374 (626)
T ss_pred ccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCccCCcc
Confidence 884 4667999999999986 459999999999999999999999999887765433 34457899999999999999
Q ss_pred HHHHHHHhCCCC-ceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCC-CcceEEEecC---
Q 012774 323 TIMAFASKFPKV-VLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPG-KEGELSIRGP--- 397 (456)
Q Consensus 323 ~~~~~~~~~~~~-~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g-~~Gel~i~g~--- 397 (456)
.++++.+.+ +. +|.+.||+||+|+.++.+.......++++.+.|.+++.+.|+| ++|+.++.+ +.|+|+++.+
T Consensus 375 ~~ew~~~~~-~~~pv~e~~~qtEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~d-e~g~~~~~~~~~G~l~~~~~~P~ 452 (626)
T KOG1175|consen 375 AWEWWKRVT-GLDPIYETYGQTETGGICITPKPGKLPIKPGSAGKPFPGYDVQILD-ENGNELPPSTGNGELRLKPPWPP 452 (626)
T ss_pred hHHHHHHhc-CccchhhceeeeccCceeeeccCCCCCcCccccCCCCCCcceEEEC-CCCCCcCCCCceeEEEEeCCCCc
Confidence 999999998 55 7999999999999887654333256889999999999999999 588888876 8899999984
Q ss_pred CcccccCCCccccccccCC--CCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 398 TIMKGYVGEPEVTSATLLP--DGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 398 ~~~~gy~~~~~~~~~~~~~--~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
+.+++|++|++........ .|+|.|||.|++|+||+++++||.||+|+++|+|++++||
T Consensus 453 ~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEI 513 (626)
T KOG1175|consen 453 GMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEI 513 (626)
T ss_pred cccccccCCHHHhhhhhcccCCceEEecCceEEcCCceEEEEecccccccccceeecHHHH
Confidence 5689999999844444334 6899999999999999999999999999999999999986
No 118
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.4e-49 Score=387.14 Aligned_cols=327 Identities=18% Similarity=0.188 Sum_probs=281.9
Q ss_pred EEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhh
Q 012774 61 LINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQL 140 (456)
Q Consensus 61 ~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~ 140 (456)
+++. ++++||+||.++++++|+.|. .|+++|++|+++++|+++++++++|++++|++++|+++..+.+.+..+++.
T Consensus 2 ~~~~--~~~~ty~el~~~~~~~a~~l~--~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~ 77 (414)
T PRK08308 2 LIVN--DEEYSKSDFDLRLQRYEEMEQ--FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKR 77 (414)
T ss_pred eEec--CceecHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHh
Confidence 5566 789999999999999999985 489999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEEccchHHHHhccCCeEEEEcCCchhhhhcccCCCccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHH
Q 012774 141 SNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAA 220 (456)
Q Consensus 141 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~ 220 (456)
++++++++++.... .. . .....++++++++|||||||.||+|.++|+++..+
T Consensus 78 ~~~~~~i~~~~~~~-----------~~---------~--------~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~ 129 (414)
T PRK08308 78 AGCHGLLYGESDFT-----------KL---------E--------AVNYLAEEPSLLQYSSGTTGEPKLIRRSWTEIDRE 129 (414)
T ss_pred CCCCEEEecCcccc-----------cc---------c--------CCCCCCCCceEEEECCCCCCCCcEEEEehHhHHHH
Confidence 99999998763100 00 0 01234578999999999999999999999999988
Q ss_pred HHHhccCCCCCCCCcEEEEecchhhHhhH-HHHHHHhHhcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCC
Q 012774 221 VASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGG 299 (456)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 299 (456)
+......+ ....+++++..+|++|.+++ ..++.++..|+++++.+.+++..+++.++++++|.++++|+++..+.+..
T Consensus 130 ~~~~~~~~-~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~ 208 (414)
T PRK08308 130 IEAYNEAL-NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQHILYAVPLMLHILGRLL 208 (414)
T ss_pred HHHHHHhh-CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCCeEEEcCHHHHHHHHhcC
Confidence 87776666 56788999999999999998 56788999999999999899999999999999999999999999998764
Q ss_pred CCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCC
Q 012774 300 STDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPE 379 (456)
Q Consensus 300 ~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~ 379 (456)
.. ..+++.+++||+++++++.+++++. ..++++.||+||++++.... .....+++|+|+|++++++.+ +
T Consensus 209 ~~----~~~l~~~~~~G~~l~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~----~~~~~~~~G~p~~~~~~~~~~-~ 277 (414)
T PRK08308 209 PG----TFQFHAVMTSGTPLPEAWFYKLRER--TTYMMQQYGCSEAGCVSICP----DMKSHLDLGNPLPHVSVSAGS-D 277 (414)
T ss_pred Cc----cccccEEEEccCCCCHHHHHHHHHh--CChhhhccCccccCCeeecC----CCCCCCccCccCCCeEEEEec-C
Confidence 32 1368899999999999999999987 57899999999998654321 123457899999999999976 2
Q ss_pred CCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 380 TGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 380 ~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
.++.|||++++ .++||+|||+|++|+||+++++||.||+||++|++|+|.|+
T Consensus 278 ------~~~~gel~v~~-------------------~~~~~~TGDl~~~~~dg~l~~~GR~~~~ik~~G~~v~p~eI 329 (414)
T PRK08308 278 ------ENAPEEIVVKM-------------------GDKEIFTKDLGYKSERGTLHFMGRMDDVINVSGLNVYPIEV 329 (414)
T ss_pred ------CCCCceEEEEc-------------------CCceEECCceEEECCCccEEEecccCCeEEECCEEECHHHH
Confidence 25569999974 25799999999999999999999999999999999999874
No 119
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=9.9e-44 Score=366.81 Aligned_cols=402 Identities=22% Similarity=0.269 Sum_probs=335.6
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
.++++++.+.+... |++.|+++. +..+||+||.++++++|+.|.+ .|+.++++|+++.+.++++++.++|+++
T Consensus 227 ~~i~~~f~~~a~~~----p~~~a~~~~--~~~lty~el~~~a~~la~~l~~-~g~~~~~~V~i~~~rs~~~i~~~l~ilk 299 (642)
T COG1020 227 LTIHLLFEEQAATT----PDAVALVRG--GQQLTYAELDARANRLARLLIS-LGVGPGETVAILADRSLELVVALLAVLK 299 (642)
T ss_pred chHHHHHHHHHHhC----CCceeEecC--CCcccHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEcCCCHHHHHHHHHHHh
Confidence 68999999999999 999999987 7899999999999999999999 8999999999999889999999999999
Q ss_pred hCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhccCCeEEEEcCCchhhhhcccCCCccccccCCCCCCEEEE
Q 012774 118 LGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAI 197 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i 197 (456)
+|..++|+++.++.+++.+++++..+.++++............. +.++..... .. ..........+++.+|+
T Consensus 300 aG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~---~~~~~~~~~~~~~~ayi 371 (642)
T COG1020 300 AGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGLPG--LALDDALSE---IP---DTDPIPQALLGDALAYI 371 (642)
T ss_pred cCCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccccCCc--ccccccccc---CC---ccCcccccCCCCCeEEE
Confidence 99999999999999999999999999999998443322111111 111111110 00 00111223455899999
Q ss_pred EcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEecC---CCHHHHH
Q 012774 198 MYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR---FDLKMML 274 (456)
Q Consensus 198 ~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~---~~~~~~~ 274 (456)
+|||||||.||||.++|+++.+........+ .....|+++...++.+..+...++.++..|+.+++.+. .++..+.
T Consensus 372 iytsgstg~Pkgv~~~h~~~~~~~~~~~~~~-~~~~~d~~l~~~s~~fD~~~~~~f~~l~~G~~l~~~~~~~~~~~~~l~ 450 (642)
T COG1020 372 IYTSGSTGQPKGVRIEHRALANLLNDAGARF-GLDADDRVLALASLSFDASVFEIFGALLEGARLVLAPALLQVDPAALL 450 (642)
T ss_pred EEccCCCCCCCCceecCHHHHHHHHHHHHhc-CCCcccEEeecCCcccchhHHHHHHHHhCCCEEEecCccccCCHHHHH
Confidence 9999999999999999999998777666666 67888899999998777778899999999999999863 6899999
Q ss_pred HHHHHhcceeEEecHHHHHHHhcCCCCCC--CCCCCceEEEecCCCCCHHHHHHHHHhCC-CCceEeccCcccccccccc
Q 012774 275 KAVEEFRVTHAAVTPPIVVAMSKGGSTDG--YDLSSLETVACGAAPLGKDTIMAFASKFP-KVVLVQAYGLTESTAGVFR 351 (456)
Q Consensus 275 ~~i~~~~~t~~~~~P~~~~~l~~~~~~~~--~~l~~lr~v~~gG~~~~~~~~~~~~~~~~-~~~i~~~yG~tE~~~~~~~ 351 (456)
+.+.++++|++..+|..+..++....... .....+|.+++||+.++.++...+....+ ...+.+.||+||+...+..
T Consensus 451 ~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~ 530 (642)
T COG1020 451 ELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLDAPS 530 (642)
T ss_pred HHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhheee
Confidence 99999999999999999999988622221 22345999999999999999999988764 5789999999996665554
Q ss_pred ccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccC
Q 012774 352 TVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDED 431 (456)
Q Consensus 352 ~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~d 431 (456)
...........++|+|+++..++|+| ..++.++.|..||+++.|.++++||+++++.+.+.|..+.+|+|||++++..|
T Consensus 531 ~~~~~~~~~~~piG~p~~n~~~~ild-~~~~~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~~d 609 (642)
T COG1020 531 FPISAELESRVPIGRPVANTQLYILD-QGLRPLPLGVPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARPLAD 609 (642)
T ss_pred EEcccccCCCCCcceeeCCCeEEEEC-CCCCcCCCCCCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeECCC
Confidence 33222221246899999999999999 88999999999999999999999999999999999975558999999999999
Q ss_pred CcEEEecccccceeeCCeeecCCCC
Q 012774 432 GFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 432 g~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
|.+.++||.|+++|++|++|.+.||
T Consensus 610 g~~e~lgr~D~qvki~g~Riel~ei 634 (642)
T COG1020 610 GALEYLGRKDSQVKIRGFRIELGEI 634 (642)
T ss_pred CeEEEeccccceeEeceEecCcHHH
Confidence 9999999999999999999977654
No 120
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=3.9e-42 Score=366.64 Aligned_cols=375 Identities=14% Similarity=0.101 Sum_probs=283.7
Q ss_pred CCCHHHHhhhcccCCCCCCCCCcEEEEC---CCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHH
Q 012774 37 PISAVDYVSSLRATLPWRDDDTVALINS---VTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYF 113 (456)
Q Consensus 37 ~~~~~~~l~~~~~~~~~~~p~~~A~~~~---~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~l 113 (456)
..|+.+++.+.++++ |+++|+... ...+++||+|+.++++++|++|.+ +|+++||+|+|+++|+++|+++.+
T Consensus 426 ~~Tl~dll~~~a~~~----pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~-lGV~~GDrVaIls~N~~Ewvia~l 500 (1452)
T PTZ00297 426 VRSLGEMWERSVTRH----STFRCLGQTSESGESEWLTYGTVDARARELGSGLLA-LGVRPGDVIGVDCEASRNIVILEV 500 (1452)
T ss_pred CCCHHHHHHHHHHHC----CCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCHHHHHHHH
Confidence 369999999999999 999999632 223689999999999999999999 999999999999999999999999
Q ss_pred HHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhcc---CC-eEEEEcCC-----------------chh
Q 012774 114 SLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKL---KH-RTILIDSP-----------------EFD 172 (456)
Q Consensus 114 a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~---~~-~~~~~~~~-----------------~~~ 172 (456)
||+++|++.+|+.+ +.+++.+++++++++++|++.+....+.+. .+ .+++++.. .|+
T Consensus 501 A~~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~~~~i~~~s~~ 578 (1452)
T PTZ00297 501 ACALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRSRKLETVVYTHSFYDEDDHAVARDLNITLIPYE 578 (1452)
T ss_pred HHHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcccCCcEEEEECCCcccccccccccCCcceeeHH
Confidence 99999999999975 467899999999999999998777666432 22 34444321 144
Q ss_pred hhhcccCCCccccccCCCCCCEEEEEc---CCCCCCCCchhcccHHHHHHHHHHhccCC--CCCCCCcEEEEecchhhHh
Q 012774 173 SMTMSWNSKHELDRAKVCQSDVAAIMY---SSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIY 247 (456)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~a~i~~---TSGtTG~PK~V~~th~~l~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~ 247 (456)
++...+............+++++.++| ||||||.||||++||+|++.++....... +...++|++++.+|++|++
T Consensus 579 ~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLaHI~ 658 (1452)
T PTZ00297 579 FVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFAMLF 658 (1452)
T ss_pred HHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHHHHH
Confidence 444332211111122346788998885 99999999999999999999888765422 1345789999999999999
Q ss_pred hHHHHHHHhHhcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCC-------------------------
Q 012774 248 GLFFCFRAAALMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTD------------------------- 302 (456)
Q Consensus 248 g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~------------------------- 302 (456)
+....+.++..|+++.. +++..+++.|++++||+++++|.+++.+.......
T Consensus 659 er~~~~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~~~~ 735 (1452)
T PTZ00297 659 NRVFVLGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRLINI 735 (1452)
T ss_pred HHHHHHHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhc
Confidence 98777788899998864 47899999999999999999999998775432100
Q ss_pred -CCCC----------------CCceEEEecCC--CCCHHHHHHHHHhCCCCceEeccCccccccccccccCCCCCCCCCc
Q 012774 303 -GYDL----------------SSLETVACGAA--PLGKDTIMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDECRRWGS 363 (456)
Q Consensus 303 -~~~l----------------~~lr~v~~gG~--~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~~~~~~ 363 (456)
.... .++|.+++||+ +++ ..... ++++...||+||... .. ... .. ..
T Consensus 736 g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~-----~~l~~--~i~i~~g~glTE~~~---~~-~~~-~~--~~ 801 (1452)
T PTZ00297 736 HRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTS-----FSLLE--HISVCYVPCLREVFF---LP-SEG-VF--CV 801 (1452)
T ss_pred CCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccC-----hHHhC--CceEEEecceEEeee---ec-CCC-Cc--cc
Confidence 0000 46899999873 444 33333 577888999999532 11 111 11 23
Q ss_pred cccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEecccccc
Q 012774 364 TGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVDRLKDL 443 (456)
Q Consensus 364 ~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~GR~~d~ 443 (456)
.|.|+|+++++|.+.++... .+..|||+++ |+++|+.|.+.+ +||+ +||+|.|+||+||+
T Consensus 802 ~G~PlpgvEvKI~~~~E~~~--~~~~GEIlvr-------~~kdpe~T~e~~--~gW~---------~dG~L~IidRkKdl 861 (1452)
T PTZ00297 802 DGTPAPSLQVDLEPFDEPSD--GAGIGQLVLA-------KKGEPRRTLPIA--AQWK---------RDRTLRLLGPPLGI 861 (1452)
T ss_pred CCeecCceEEEEcccccccC--CCCCCeEEEE-------ECCChHHHHHhh--CcCc---------cCCeEEEEeccccc
Confidence 39999999999997322211 1346999995 357888888743 5664 69999999999999
Q ss_pred eeeC-CeeecCCC
Q 012774 444 IKYK-GYQVLPLL 455 (456)
Q Consensus 444 ik~~-G~~v~p~e 455 (456)
||.. |++|.|..
T Consensus 862 ikls~GEyVaP~~ 874 (1452)
T PTZ00297 862 LLPVAYEYVIAAE 874 (1452)
T ss_pred eECCCCcEEcHHH
Confidence 9985 99999964
No 121
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.2e-36 Score=291.72 Aligned_cols=236 Identities=29% Similarity=0.465 Sum_probs=200.3
Q ss_pred CCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEe--
Q 012774 188 KVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVM-- 265 (456)
Q Consensus 188 ~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~-- 265 (456)
...++++++++|||||||.||+|+++|+++..........+ ...++++..+|++|..++..++.++..|++.++.
T Consensus 31 ~~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~---~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~~ 107 (358)
T PRK07824 31 EPIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL---GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELDV 107 (358)
T ss_pred CCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc---CCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecCc
Confidence 34568999999999999999999999999988877665544 3457889999999999998888899999998873
Q ss_pred -cCCCHHHHHHHHHHhc--ceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCc
Q 012774 266 -QRFDLKMMLKAVEEFR--VTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGL 342 (456)
Q Consensus 266 -~~~~~~~~~~~i~~~~--~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~ 342 (456)
..+++..+++.+++++ .++...+|..+..++.... ...+++++|.+++||+++++++.+.+.+. ++++++.||+
T Consensus 108 ~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~-~~~~~~~l~~i~~gG~~l~~~~~~~~~~~--~~~v~~~YG~ 184 (358)
T PRK07824 108 SAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPA-ATAALAELDAVLVGGGPAPAPVLDAAAAA--GINVVRTYGM 184 (358)
T ss_pred CCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcc-ccCCcccceEEEECCCCCCHHHHHHHHhc--CCcEEecccC
Confidence 4578999999999998 5666778888877766543 23457899999999999999999998864 8999999999
Q ss_pred cccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeec
Q 012774 343 TESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRT 422 (456)
Q Consensus 343 tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~T 422 (456)
||++..+ ...|.|++++++++.+ |||+++|+.++.||+++++.+ .+..+|||+|
T Consensus 185 TE~~~~~------------~~~G~~~~g~~v~i~~------------Gei~v~g~~~~~gY~~~~~~~--~~~~~g~~~T 238 (358)
T PRK07824 185 SETSGGC------------VYDGVPLDGVRVRVED------------GRIALGGPTLAKGYRNPVDPD--PFAEPGWFRT 238 (358)
T ss_pred CccCCCc------------CcCceeCCCCEEEecC------------CEEEEecCccccccCCCcccc--cccCCCceec
Confidence 9986532 2358999999999954 999999999999999988753 3546789999
Q ss_pred cceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 423 GDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 423 GDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
||+|++ ++|++++.||.||+||++|++|+|.|+
T Consensus 239 GDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eI 271 (358)
T PRK07824 239 DDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVV 271 (358)
T ss_pred ccEEEE-eCCEEEEEeccCCeEEECCEEECHHHH
Confidence 999999 899999999999999999999999874
No 122
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=3.5e-32 Score=266.06 Aligned_cols=247 Identities=23% Similarity=0.268 Sum_probs=189.5
Q ss_pred CCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHh---ccCCCCCCCCcEEEEecchhhHh-hHHHHHHHhHhcceEEEe
Q 012774 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASS---FASSPKRVSPAVMLFTMPYFHIY-GLFFCFRAAALMETAVVM 265 (456)
Q Consensus 190 ~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~-g~~~~~~~l~~G~~~~~~ 265 (456)
..++++++++||||||.||+|.++|.++..+.... .... +...+|++++..+..+.. ++...+.+...|++++..
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~-g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 151 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAA-GGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPI 151 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHc-CCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEec
Confidence 44678889999999999999999999986553322 2223 567788888766543322 233345677789998888
Q ss_pred cCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCC--CCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCcc
Q 012774 266 QRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYD--LSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLT 343 (456)
Q Consensus 266 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~--l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~t 343 (456)
+..+++.+++.|+++++|+++++|+.+..|++.....+.+ ..++|.+++|||++++++.+.+.+.| ++++++.||+|
T Consensus 152 ~~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~-g~~v~~~YG~t 230 (422)
T TIGR02155 152 SGGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARL-GMKATDIYGLS 230 (422)
T ss_pred CCCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHh-CCceEecccch
Confidence 7778899999999999999999999999988754333222 35899999999999999999999999 79999999999
Q ss_pred ccccccccccCCCCCCCCCcccccc--CCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeee
Q 012774 344 ESTAGVFRTVGPDECRRWGSTGRLS--AGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMR 421 (456)
Q Consensus 344 E~~~~~~~~~~~~~~~~~~~~G~~~--~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~ 421 (456)
|+++......... ...|.++ +++.++|+|+++++++++|+.|||++++. +...+ +.+||+
T Consensus 231 E~~~~~~~~~~~~-----~~~g~~~~~~~~~~eivd~~~g~~v~~Ge~Gelvvt~~------------~~~~~-p~~ry~ 292 (422)
T TIGR02155 231 EVIGPGVAMECVE-----TQDGLHIWEDHFYPEIIDPHTGEVLPDGEEGELVFTTL------------TKEAL-PVIRYR 292 (422)
T ss_pred hhcCCceeecccc-----cCCCceEecCeeEEEEECCCCCCCCCCCCeeEEEEecC------------Ccccc-ceeeEE
Confidence 9853211111111 0112233 45778899988899999999999999873 22334 568999
Q ss_pred ccceEEEccC-C-----cEEEecccccceeeCCeeecCCCC
Q 012774 422 TGDLCYIDED-G-----FLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 422 TGDl~~~~~d-g-----~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
|||+++++++ | .+++.||.||+||++|.+|+|.|+
T Consensus 293 TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~ei 333 (422)
T TIGR02155 293 TRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQL 333 (422)
T ss_pred cCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHH
Confidence 9999999876 4 578999999999999999999764
No 123
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.97 E-value=5.3e-31 Score=251.65 Aligned_cols=216 Identities=20% Similarity=0.184 Sum_probs=171.4
Q ss_pred CCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCC--CCCcEEEEecchhhHhhH-HHHHHHhHhcceEEEecCC
Q 012774 192 SDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKR--VSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQRF 268 (456)
Q Consensus 192 ~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~~~~~~~ 268 (456)
+..++++|||||||.||+|+++|+++..........+ +. ...+++++.+|++|.+++ ..++.++..|+++++.+.+
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~ 173 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKIL-GERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAA 173 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHh-CcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCC
Confidence 5578999999999999999999999988777665554 33 334689999999999887 5677888999999999888
Q ss_pred CHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccccccc
Q 012774 269 DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTAG 348 (456)
Q Consensus 269 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~~ 348 (456)
++..+++.++.. |+++++|+++..+.+.. ..++++|. ++||+++++++++.+++. +...+++.||+||++++
T Consensus 174 ~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i 245 (386)
T TIGR02372 174 PASGIMRHARPG--DLIVGTPFIWEQLADLD----YRLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGI 245 (386)
T ss_pred ChHHHHHhhccC--CEEEECcHHHHHHHhhC----cCCCccee-EecCCCCCHHHHHHHHHh-cccchhheecccccccc
Confidence 998888888743 89999999999997642 34677876 678999999999999886 23579999999999875
Q ss_pred cccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEE
Q 012774 349 VFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYI 428 (456)
Q Consensus 349 ~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~ 428 (456)
.+.. ..+..|+++|++++.+ + ++. + .|+ ..|++|||+|++
T Consensus 246 ~~~~-------~~~~~~~~~p~~~~~~-~--~~~--------~---~g~-------------------~~~~~tgD~g~~ 285 (386)
T TIGR02372 246 GLRE-------APDDPFRLLPDLACFA-D--TLS--------S---AGL-------------------ARRLDLQDRLAW 285 (386)
T ss_pred cccc-------CCCCCcccCCCccccC-C--Ccc--------C---CCc-------------------cceeecCceEEE
Confidence 4431 1234567888776543 1 111 0 011 236899999999
Q ss_pred ccCCcEEEecccccceeeCCeeecCCCC
Q 012774 429 DEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 429 ~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
|++|+++|.||+||+||++|++|+|.|+
T Consensus 286 d~~G~l~i~GR~dd~Ik~~G~~V~p~eI 313 (386)
T TIGR02372 286 DKDGGFTILGRKDEILQVGGVNVSPGHV 313 (386)
T ss_pred cCCCcEEEecccCCEEEECCEEEcHHHH
Confidence 9999999999999999999999999874
No 124
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.96 E-value=1.2e-26 Score=229.47 Aligned_cols=413 Identities=17% Similarity=0.254 Sum_probs=294.0
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECC----CCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSV----TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYF 113 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~----~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~l 113 (456)
.++.|+|..+++.+ |+++|+...+ +..++||+++..+|.+++..|..+..+++||.|+|+++++.|++++++
T Consensus 770 ~~ile~Lq~R~a~t----p~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~ 845 (1363)
T KOG3628|consen 770 LTILEILQWRAAKT----PDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIY 845 (1363)
T ss_pred HHHHHHHHHHhhcC----CCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHH
Confidence 57899999999999 9999997642 347899999999999999999997789999999999999999999999
Q ss_pred HHHHhCCeEecCCCCC------CHHHHHHHhhhcCCeEEEEccchHHHHhccC---------Ce-EEEEcCCchhhhhcc
Q 012774 114 SLLSLGVIISPANPVN------TESEISRQIQLSNPVIAFATSSVVHKLAKLK---------HR-TILIDSPEFDSMTMS 177 (456)
Q Consensus 114 a~~~~G~~~v~l~~~~------~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~---------~~-~~~~~~~~~~~~~~~ 177 (456)
||+++|++++|+.|.- +...+..+++..++..|+++......+++.. .. +++.++.. +.....
T Consensus 846 ~Cly~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~-~t~~k~ 924 (1363)
T KOG3628|consen 846 ACLYLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLP-ETIRKR 924 (1363)
T ss_pred HHHhcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccc-hhhhhh
Confidence 9999999999998754 3467889999999999999988776665211 11 11111110 001010
Q ss_pred cCC----CccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhH-HHH
Q 012774 178 WNS----KHELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFC 252 (456)
Q Consensus 178 ~~~----~~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~ 252 (456)
..+ ..........++.+|++-+.--++|.--++.++|..+++.+....+.. .+.+..-++...+.+...|+ .++
T Consensus 925 ~~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~-~l~~~rpl~~~~~~~sGlgf~~wc 1003 (1363)
T KOG3628|consen 925 KKNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETC-QLYKSRPLLGCSSPYSGLGFNHWC 1003 (1363)
T ss_pred hhhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHH-ccccCCceEEEecCccchhHHHHH
Confidence 000 001112234557899999988899999999999999999999888887 45555555555555555566 888
Q ss_pred HHHhHhcceEEEecC----CCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCc------eEEEecCCCCCHH
Q 012774 253 FRAAALMETAVVMQR----FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSL------ETVACGAAPLGKD 322 (456)
Q Consensus 253 ~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~l------r~v~~gG~~~~~~ 322 (456)
+...+.|.+.++++. .++..++..|+++++.-++.+-..++.+......+..+++.. -.++..-+.....
T Consensus 1004 LlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~s~vv~~~~RPr~a 1083 (1363)
T KOG3628|consen 1004 LLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSSSIVVPAEERPRIA 1083 (1363)
T ss_pred HHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhcccccceeeecCCccHHH
Confidence 999999999888763 488999999999999999998888888877655443333221 2333344555556
Q ss_pred HHHHHHHhCCCCc-----eEeccCcccccccccccc-CCC-------------------CCCC-----CCccccccCCcE
Q 012774 323 TIMAFASKFPKVV-----LVQAYGLTESTAGVFRTV-GPD-------------------ECRR-----WGSTGRLSAGLE 372 (456)
Q Consensus 323 ~~~~~~~~~~~~~-----i~~~yG~tE~~~~~~~~~-~~~-------------------~~~~-----~~~~G~~~~~~~ 372 (456)
+...+.+.|...- +.-.|+.-=-..++...+ ..+ +... ....|...++++
T Consensus 1084 li~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~ 1163 (1363)
T KOG3628|consen 1084 LIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTD 1163 (1363)
T ss_pred HHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccCCcccccce
Confidence 6777777662111 222333322111111100 000 0000 112488889999
Q ss_pred EEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccc-cccccC---------CCCeeeccceEEEcc------C----C
Q 012774 373 AKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEV-TSATLL---------PDGWMRTGDLCYIDE------D----G 432 (456)
Q Consensus 373 ~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~-~~~~~~---------~~g~~~TGDl~~~~~------d----g 432 (456)
+.|++|++-.++..|+.||||+.|.+-+.+|+...+. ....|. ...|-||||+|+.+. + .
T Consensus 1164 i~IvnPEtk~pc~dge~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t~~t~~~~e~~~ 1243 (1363)
T KOG3628|consen 1164 IAIVNPETKGPCRDGELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRRTSLTDANVERHD 1243 (1363)
T ss_pred eEEeCCccccccccCCcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeeeeeeeeeecccccceeee
Confidence 9999999999999999999999999998888754221 111111 235999999999842 2 3
Q ss_pred cEEEecccccceeeCCeeecCCCC
Q 012774 433 FLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 433 ~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
-+|++|-.++.+.++|.+.+|..|
T Consensus 1244 ~LyVlG~i~EtlEl~GL~h~p~DI 1267 (1363)
T KOG3628|consen 1244 LLYVLGAIDETLELNGLRHFPSDI 1267 (1363)
T ss_pred eEEEeecccceeeecCcccCcchH
Confidence 599999999999999999999754
No 125
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.95 E-value=5.8e-27 Score=229.46 Aligned_cols=248 Identities=16% Similarity=0.132 Sum_probs=180.5
Q ss_pred CCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCC--CCCCCCcEEEEecchhhHhhH-HHHHHHhHhcceEEEec
Q 012774 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETAVVMQ 266 (456)
Q Consensus 190 ~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~~~~~ 266 (456)
..++++.+++||||||.||+|.+||+++..........+ .+..++|+++...+..+..+. ...+.+...|++++...
T Consensus 84 ~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~ 163 (445)
T TIGR03335 84 DWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEG 163 (445)
T ss_pred CHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCC
Confidence 456788999999999999999999999876554332221 156788999988887765554 33455677888765443
Q ss_pred CCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCC--CCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCccc
Q 012774 267 RFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGY--DLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTE 344 (456)
Q Consensus 267 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~--~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE 344 (456)
. ....++.|+++++|++.++|+.+..|++....... ...++|.+++|||++++++.+.+.+.| ++++++.||+||
T Consensus 164 ~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~-g~~v~~~YG~TE 240 (445)
T TIGR03335 164 K--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELW-GCEVYNTYGSTE 240 (445)
T ss_pred c--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHh-CCcEEecCChhh
Confidence 3 34668999999999999999998887764333222 246899999999999999999999988 899999999999
Q ss_pred cccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccc
Q 012774 345 STAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGD 424 (456)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD 424 (456)
++. +..+. . ......+-+.+.++|+|++++.++++|+.|||++++-.... ..... +--.|+|||
T Consensus 241 ~~~-~~~c~--~----~~g~h~~~d~~~vEIvDp~~~~~vp~Ge~GELvvT~L~~~~------~r~~~---PliRYrtgD 304 (445)
T TIGR03335 241 GTM-CGECQ--A----VAGLHVPEDLVHLDVYDPRHQRFLPDGECGRIVLTTLLKPG------ERCGS---LLINYDTED 304 (445)
T ss_pred hhh-eEEec--C----CCCccccCCceEEEEEcCCCCCCCcCCCceEEEEEecCCCC------ccCCc---eEEEeecCc
Confidence 862 22211 1 11122334567899999888889999999999998743100 00001 112599999
Q ss_pred eEEEcc-C----C----cEEEecccccceeeCCeeecCCCC
Q 012774 425 LCYIDE-D----G----FLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 425 l~~~~~-d----g----~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
++++.. + | .+...||.||+++++|.+|+|+++
T Consensus 305 ~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~i 345 (445)
T TIGR03335 305 TTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDV 345 (445)
T ss_pred eEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHH
Confidence 999732 2 3 244579999999999999999753
No 126
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.95 E-value=8.6e-26 Score=200.00 Aligned_cols=205 Identities=13% Similarity=0.054 Sum_probs=157.3
Q ss_pred hhhcccCCCCCCCCCcEEEEC-C---CCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhC
Q 012774 44 VSSLRATLPWRDDDTVALINS-V---TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLG 119 (456)
Q Consensus 44 l~~~~~~~~~~~p~~~A~~~~-~---~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G 119 (456)
|+..++++ |+++|++.. + +++++||+||.++++++|+.|.++.|+++||+|+|+++|+++++++++|++++|
T Consensus 2 ~~~~~~~~----p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G 77 (227)
T TIGR03089 2 LSPLLAAD----PASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTG 77 (227)
T ss_pred hhhhhhhC----CCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 45566777 999999743 2 234799999999999999999862599999999999999999999999999999
Q ss_pred CeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhccCCeEEEEc-----C----------CchhhhhcccCCCccc
Q 012774 120 VIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILID-----S----------PEFDSMTMSWNSKHEL 184 (456)
Q Consensus 120 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~-----~----------~~~~~~~~~~~~~~~~ 184 (456)
++++|++ .+++++++++++....+... ..++.+. . .++........ ...
T Consensus 78 ~v~vp~n-------------~s~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 141 (227)
T TIGR03089 78 VEVVLAG-------------DPDADVVVTGPDRLAAAAGS-GEVVALSLDPLGRRVAGELPPGVIDFAPEVRVHG--DQF 141 (227)
T ss_pred CEEEeCC-------------CCCCCEEEeCcchhhhcccC-CceEEEeccccccCCCCCCCCcccchhhhhhccC--CCC
Confidence 9999995 67899999998877765422 2222221 0 01222111110 011
Q ss_pred ccc-CCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhH-HHHHHHhHhcceE
Q 012774 185 DRA-KVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGL-FFCFRAAALMETA 262 (456)
Q Consensus 185 ~~~-~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~ 262 (456)
... ...++|++.++||||+ +|+++..+. ... ++.++|+++ .+|++|++|+ ..++.++..|+++
T Consensus 142 ~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~-~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~ 206 (227)
T TIGR03089 142 APYEPPDATAPALVAGGGEW---------TGAELVAAA----RAA-GLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSL 206 (227)
T ss_pred CCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhc-CCCCCCeEE-ecCCCchHHHHHHHHHHhccCceE
Confidence 111 3456899999999985 666665544 222 578899999 9999999999 6788999999999
Q ss_pred EEecCCCHHHHHHHHHHhcce
Q 012774 263 VVMQRFDLKMMLKAVEEFRVT 283 (456)
Q Consensus 263 ~~~~~~~~~~~~~~i~~~~~t 283 (456)
++.++|+++.+++.|+++++|
T Consensus 207 v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 207 VLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred EEecCCCHHHHHHHHHhhcCC
Confidence 999999999999999999987
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.92 E-value=7e-24 Score=197.51 Aligned_cols=249 Identities=26% Similarity=0.319 Sum_probs=190.4
Q ss_pred CCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCC--CCCCCCcEEEEecch-hhHhhHHHHHHHhHhcceEEE
Q 012774 188 KVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPY-FHIYGLFFCFRAAALMETAVV 264 (456)
Q Consensus 188 ~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~--~~~~~~~~~~~~~p~-~~~~g~~~~~~~l~~G~~~~~ 264 (456)
....++...+-.||||||+|+.+.++...+......+.+.+ .+...+|++....-. .+..|+..-.++-..|++++-
T Consensus 86 ~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip 165 (438)
T COG1541 86 AVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIP 165 (438)
T ss_pred cccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEc
Confidence 34456677799999999999999999998866555544444 256677777665442 223334444555567877777
Q ss_pred ecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCC--CCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCc
Q 012774 265 MQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDG--YDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGL 342 (456)
Q Consensus 265 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~--~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~ 342 (456)
...-+.+.-+++++++++|++.++|+++..|++.....+ ..-.++|.+++|+|++++++++.+.+.| |+..++.||+
T Consensus 166 ~~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~-g~~~~diYGl 244 (438)
T COG1541 166 ISGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRF-GCKAFDIYGL 244 (438)
T ss_pred cCCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHh-CCceeecccc
Confidence 766678899999999999999999999999998876664 3346899999999999999999999999 9999999999
Q ss_pred cccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeec
Q 012774 343 TESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRT 422 (456)
Q Consensus 343 tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~T 422 (456)
||..+.... ++.........-+...++|+||++++.++.|+.|||+++.-. +..+ +--.|+|
T Consensus 245 tE~~g~g~~-----eC~~~~glhi~eD~~~~Ei~dP~t~e~l~dge~GelV~T~L~------------~~~~-PlIRYrt 306 (438)
T COG1541 245 TEGFGPGAG-----ECTERNGLHIWEDHFIFEIVDPETGEQLPDGERGELVITTLT------------KEGM-PLIRYRT 306 (438)
T ss_pred ccccCCccc-----ccccccCCCcchhhceeeeecCCcCccCCCCCeeEEEEEecc------------ccCc-ceEEEEc
Confidence 999766411 111112233445678999999999999999999999998632 1111 2236999
Q ss_pred cceEEEccC----Cc-----EEEecccccceeeCCeeecCCC
Q 012774 423 GDLCYIDED----GF-----LFIVDRLKDLIKYKGYQVLPLL 455 (456)
Q Consensus 423 GDl~~~~~d----g~-----l~~~GR~~d~ik~~G~~v~p~e 455 (456)
||+.++..+ |. -.+.||.||+++++|.+|+|..
T Consensus 307 gDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ 348 (438)
T COG1541 307 GDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQ 348 (438)
T ss_pred CCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHH
Confidence 999999763 32 4589999999999999999975
No 128
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.90 E-value=1.7e-22 Score=206.28 Aligned_cols=403 Identities=17% Similarity=0.101 Sum_probs=249.4
Q ss_pred CHHHHhhhcccCCCCCCCCCcEEEEC----C--CCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHH
Q 012774 39 SAVDYVSSLRATLPWRDDDTVALINS----V--TGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILY 112 (456)
Q Consensus 39 ~~~~~l~~~~~~~~~~~p~~~A~~~~----~--~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~ 112 (456)
++..-+.+.+.+. |...+..+. . .-..+||++....++.+++.|.+ .|..+|+.|++++..+.++++..
T Consensus 37 ~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~-~~~~~~~~v~i~~~~~~d~~v~v 111 (1032)
T KOG1178|consen 37 TLEDSFRRELAEA----PENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVS-LGSLRGTTVAIYMLPSVDLVVSV 111 (1032)
T ss_pred chhhHHHHHHhhc----ccCCCceEeecccccccccchhhhhhhcccchhHHHhhh-cccccCceEEEeccCcCCeeeee
Confidence 4444566666777 776665432 1 12579999999999999999999 99999999999999999999999
Q ss_pred HHHHHhCCeEecCCCCCC----HHHHHH---HhhhcCCeEEEEccch-HHHHh-cc--CCeEEEEcCCchhhhhcccCCC
Q 012774 113 FSLLSLGVIISPANPVNT----ESEISR---QIQLSNPVIAFATSSV-VHKLA-KL--KHRTILIDSPEFDSMTMSWNSK 181 (456)
Q Consensus 113 la~~~~G~~~v~l~~~~~----~~~l~~---~l~~~~~~~vi~~~~~-~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~ 181 (456)
++++++|..+++++|.++ ++.+.. .+.... .-+..... .+... +. +..+... ...+..+... .
T Consensus 112 ~~~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~--~~i~~~l~i~~~~~~~~~~~~sv~~~-~~~f~~~~~~---~ 185 (1032)
T KOG1178|consen 112 FAVLAAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVE--LEIVRRLNIIDILLNSLFPKLSVETI-ADSFQMVLHN---E 185 (1032)
T ss_pred eehhhcceEEEEecCCCcccccchHHHhhhhhheecc--ceehhhhhhHHHHhhccccccchhhc-cchhhhhhcc---C
Confidence 999999999999999999 332222 211111 11111111 11111 00 0011111 1112221111 1
Q ss_pred ccccccCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecc-h-hhHhhHHHHHHHhHhc
Q 012774 182 HELDRAKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMP-Y-FHIYGLFFCFRAAALM 259 (456)
Q Consensus 182 ~~~~~~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p-~-~~~~g~~~~~~~l~~G 259 (456)
.........++..+.+.||||+||.||+|.-+|..+.+...+....+ .....+.+ ...+ . ++..-.-.....+..|
T Consensus 186 ~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f-~~t~s~~~-~~~~~~~~~d~i~~~~~~~L~~~ 263 (1032)
T KOG1178|consen 186 DTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTF-PPTGSDRF-TFKTSVYFDDTIQKFIGALLFNG 263 (1032)
T ss_pred CCcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccC-CcCccchh-hhhheeecccchHHHHhhHhhcC
Confidence 12223345667789999999999999999999999999988888887 34445543 2222 2 2222223333445555
Q ss_pred ceEEEecCC---CHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCC-------------CCCCCCceEEEecCCCCCHHH
Q 012774 260 ETAVVMQRF---DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTD-------------GYDLSSLETVACGAAPLGKDT 323 (456)
Q Consensus 260 ~~~~~~~~~---~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-------------~~~l~~lr~v~~gG~~~~~~~ 323 (456)
+.+..+... ++..+.+.++++.++..+.+|+.+++++...... ....+.++.+..+|++...++
T Consensus 264 ~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep~~v~l 343 (1032)
T KOG1178|consen 264 NNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVLGGEPLLVSL 343 (1032)
T ss_pred ceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeeeecCCccchhh
Confidence 555555332 3799999999999999999999988777654321 011247899999999999999
Q ss_pred HHHHHHhCCCCceEeccCccccccccccccCCCCC--CCCCccccccCC-------cEEEEEcCCCCCCCCCCCc----c
Q 012774 324 IMAFASKFPKVVLVQAYGLTESTAGVFRTVGPDEC--RRWGSTGRLSAG-------LEAKIVDPETGDSLPPGKE----G 390 (456)
Q Consensus 324 ~~~~~~~~~~~~i~~~yG~tE~~~~~~~~~~~~~~--~~~~~~G~~~~~-------~~~~i~d~~~~~~~~~g~~----G 390 (456)
+..+.+.+.-.-...-|+.++..+........... .....+..+..+ ..+.+.. ..+.+.+.++. |
T Consensus 344 ~~s~~~~~~~~~~~~~y~s~~~~~~~s~~~~~~s~~ll~~~~v~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~l~ 422 (1032)
T KOG1178|consen 344 YTSTFDLLAEIFFGLPYLSTDPTGLVSYDDFSPSKVLLTNENVYSVPKFDSIIGSLTVLESLY-RAGGEGEGGVGKGCLG 422 (1032)
T ss_pred hhhhhhcccceeeeecccCCCCccceeHHhhCcccceecceeEEeccchhhccCCCcceeeee-ccCcccCCcccceeec
Confidence 99777776433444458888877665543211110 001111111111 1112222 22333332222 2
Q ss_pred eEEEecCCcccccCCCccccccccC-----CCCeeeccceEEEccCCcEEEecccccceeeCCeeecCCCC
Q 012774 391 ELSIRGPTIMKGYVGEPEVTSATLL-----PDGWMRTGDLCYIDEDGFLFIVDRLKDLIKYKGYQVLPLLN 456 (456)
Q Consensus 391 el~i~g~~~~~gy~~~~~~~~~~~~-----~~g~~~TGDl~~~~~dg~l~~~GR~~d~ik~~G~~v~p~e~ 456 (456)
.-+-.+.++..|| ..++.....+. .+.+|+|||+|+.-++|.+.+.||.|++||++|.|+...|+
T Consensus 423 ~~~~~~~~~~~g~-~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~rG~Ri~L~ei 492 (1032)
T KOG1178|consen 423 AEQNLSSWVVDGY-STPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADRQIKDRGVRIELGEL 492 (1032)
T ss_pred ccccccceeeccc-cchhhcCCcccccccchhhcccccccceeecCCCEEEEEeccceEEEccEEEehhhh
Confidence 2222334444552 33333222211 13479999999998999999999999999999999987663
No 129
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.72 E-value=2.8e-16 Score=156.83 Aligned_cols=398 Identities=14% Similarity=0.187 Sum_probs=265.8
Q ss_pred HHHHhhhcccCCCCCCCCCcEEEECCC-C--ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCC--CcHHHHHHH
Q 012774 40 AVDYVSSLRATLPWRDDDTVALINSVT-G--LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFS 114 (456)
Q Consensus 40 ~~~~l~~~~~~~~~~~p~~~A~~~~~~-~--~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~--~~~~~~~la 114 (456)
+...++.+-..+ +..+|.+.-+. | ..+||..+..++.++|+.-+.+-|++++|+|.++...+ .++++..++
T Consensus 96 ~~avl~~~~nhs----~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~g 171 (1363)
T KOG3628|consen 96 IIAVLRYRRNHS----ATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFG 171 (1363)
T ss_pred hHHHHHhhccCC----CCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhcc
Confidence 344444444444 66778766422 2 57999999999999999555558999999999988655 899999999
Q ss_pred HHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHHhccCCeEEEEcCCchhhhhcccCCC--------ccccc
Q 012774 115 LLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKLAKLKHRTILIDSPEFDSMTMSWNSK--------HELDR 186 (456)
Q Consensus 115 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 186 (456)
|...|.+.+|+.+..+.+++..+++..+.++++........+.... ...++......|... .....
T Consensus 172 c~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~------~~~s~~k~v~~w~t~~~k~~~~~~k~~~ 245 (1363)
T KOG3628|consen 172 CFLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDN------SPVSLAKAVAWWKTNDFKGNYTKDKIKK 245 (1363)
T ss_pred ccccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhcc------CcccHHHHHHhhhcccccceeehhhccC
Confidence 9999999999999999999999999999999998765544443211 112222222222110 01111
Q ss_pred cCCCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCC-------------------CCCCCCcEEEEecchhhHh
Q 012774 187 AKVCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS-------------------PKRVSPAVMLFTMPYFHIY 247 (456)
Q Consensus 187 ~~~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~-------------------~~~~~~~~~~~~~p~~~~~ 247 (456)
+..... ..++-||.+++|.--+++.+|+ +..+.+...... ......+..+.........
T Consensus 246 P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~~~~~s~~l 323 (1363)
T KOG3628|consen 246 PRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVLLTNLDPSQQL 323 (1363)
T ss_pred Cceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccceeeccCccccc
Confidence 122223 7999999999999999999998 544333222111 1234455666666666666
Q ss_pred hH-HHHHHHhHhcceEEEecC---CCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCC-----------CCCCCCCceEE
Q 012774 248 GL-FFCFRAAALMETAVVMQR---FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGST-----------DGYDLSSLETV 312 (456)
Q Consensus 248 g~-~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-----------~~~~l~~lr~v 312 (456)
|+ ..++.+++.|.+.+.+++ +.+..+.+.+.+++++++..--..++........ ...+++++|.+
T Consensus 324 GlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t~d~sslk~C 403 (1363)
T KOG3628|consen 324 GLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYKTPDLSSLKGC 403 (1363)
T ss_pred chhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcccccchhhccCCCccceeee
Confidence 77 668899999999998886 6788999999999999998775555544433211 12467899999
Q ss_pred EecCCCCCHHHHHHHHHhC----CCC----c-------------eEeccCccccccccccccCC----------------
Q 012774 313 ACGAAPLGKDTIMAFASKF----PKV----V-------------LVQAYGLTESTAGVFRTVGP---------------- 355 (456)
Q Consensus 313 ~~gG~~~~~~~~~~~~~~~----~~~----~-------------i~~~yG~tE~~~~~~~~~~~---------------- 355 (456)
++.-..+..+..+-....+ ... . .+..-++.|.+.........
T Consensus 404 ~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e~ll~~~~L 483 (1363)
T KOG3628|consen 404 MVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGEGLLSKEAL 483 (1363)
T ss_pred EEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCcccccccCccceeeecccc
Confidence 9999998887664333322 111 1 11222334443332221110
Q ss_pred ---------CC---CCCCCccccccC-CcEEEEEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCC------
Q 012774 356 ---------DE---CRRWGSTGRLSA-GLEAKIVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLP------ 416 (456)
Q Consensus 356 ---------~~---~~~~~~~G~~~~-~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~------ 416 (456)
+. ......+|...| +..+.++++++...|..+++|||||.+++...+|+.-+..|+..|..
T Consensus 484 ~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~eVGEIwVsS~~~~~~~~al~~~t~~~F~~~~~~s~ 563 (1363)
T KOG3628|consen 484 KLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDEVGEIWVSSNSLGKLFYALDKQTENTFKATPVESS 563 (1363)
T ss_pred ccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccCcceeEEEecCCcccceeeccccccceEEeeecccc
Confidence 00 001123465555 45788999899999999999999999999999999777666655532
Q ss_pred ------CCeeeccceEEEccCCcEEEeccccccee-eCCee
Q 012774 417 ------DGWMRTGDLCYIDEDGFLFIVDRLKDLIK-YKGYQ 450 (456)
Q Consensus 417 ------~g~~~TGDl~~~~~dg~l~~~GR~~d~ik-~~G~~ 450 (456)
..+.|||=+|+++ +|.++|+|-++|++. +.|.+
T Consensus 564 ~~~~~n~~FmRtGLlGFv~-~gki~vl~~k~d~llq~~~~~ 603 (1363)
T KOG3628|consen 564 GKPPSNVPFMRTGLLGFVH-NGKIYVLGLKEDGLLQVSGWR 603 (1363)
T ss_pred CCCCccchhhhhcceeeee-CCeEEEEEechhhhhhhhhhh
Confidence 1379999999995 556677776666553 34443
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.62 E-value=2e-14 Score=138.04 Aligned_cols=222 Identities=17% Similarity=0.119 Sum_probs=140.9
Q ss_pred EEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCC-C-CCCCCcEEEEe--cchhhHhhHHHHHHHhHhcce-EEEec-C
Q 012774 194 VAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS-P-KRVSPAVMLFT--MPYFHIYGLFFCFRAAALMET-AVVMQ-R 267 (456)
Q Consensus 194 ~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~-~-~~~~~~~~~~~--~p~~~~~g~~~~~~~l~~G~~-~~~~~-~ 267 (456)
...+..||||||.|-.+..+............... + +...++++... .+. +.+ ..+..... +...+ .
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~-~ly------~~~~~~~~~~~~~~l~ 173 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADN-NLY------QSVNNRWISLDFFDLL 173 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccCh-hHH------HHHHhccceeeecCCC
Confidence 34567799999999999999986654433322222 1 33333443332 221 111 11111111 11111 2
Q ss_pred CCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHhCCCCceEeccCcccccc
Q 012774 268 FDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAFASKFPKVVLVQAYGLTESTA 347 (456)
Q Consensus 268 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~~yG~tE~~~ 347 (456)
.+.+..++.|++++++++.++|+.+..|++.....+.+ .++|.++++||.++++..+.+.+.| ++++++.||+|| |.
T Consensus 174 ~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~f-g~~V~~~YG~tE-g~ 250 (430)
T TIGR02304 174 APFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVF-KNTVHQIYQATE-GF 250 (430)
T ss_pred cCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHh-CCCeeEccCCch-hh
Confidence 46889999999999999999999999999865444433 4789999999999999999999999 899999999999 55
Q ss_pred ccccccCCCCCCCCCccccccCCcEEE--EEcCCCCCCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccce
Q 012774 348 GVFRTVGPDECRRWGSTGRLSAGLEAK--IVDPETGDSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDL 425 (456)
Q Consensus 348 ~~~~~~~~~~~~~~~~~G~~~~~~~~~--i~d~~~~~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl 425 (456)
++..|. .+.+..--..+.++ ++|++ ++ ++.+|++-. + ..+ +=-.|+|||+
T Consensus 251 la~eC~-------~g~lHl~ed~~~vE~~ivD~~-~~-------~~~ViT~L~------n------~~~-PlIRYrtGD~ 302 (430)
T TIGR02304 251 LASTCR-------CGTLHLNEDLVHIEKQYLDEH-KR-------FVPIITDFT------R------TTQ-PIVRYRLNDI 302 (430)
T ss_pred eEEecC-------CCCEEEccccEEEEeeEECCC-Cc-------eEEEEecCC------C------ccc-eEEeeeCCCE
Confidence 443321 12232223344555 78843 32 344555421 1 111 1225999999
Q ss_pred EEEccC----Cc----E-EEecccccceee---CCeee--cC
Q 012774 426 CYIDED----GF----L-FIVDRLKDLIKY---KGYQV--LP 453 (456)
Q Consensus 426 ~~~~~d----g~----l-~~~GR~~d~ik~---~G~~v--~p 453 (456)
+....+ |. | .|.||.+|++++ +|..| +|
T Consensus 303 ~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p 344 (430)
T TIGR02304 303 LVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFP 344 (430)
T ss_pred EEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCH
Confidence 988543 32 3 388999999986 35444 66
No 131
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=99.32 E-value=1.6e-10 Score=108.69 Aligned_cols=228 Identities=17% Similarity=0.194 Sum_probs=140.9
Q ss_pred CCCCEEEEEcCCCCCCCCchhcccHHHHHHHHH---HhccCCCCCCCCc-EEEEecchhh---HhhH--HHHHHHhHhcc
Q 012774 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVA---SSFASSPKRVSPA-VMLFTMPYFH---IYGL--FFCFRAAALME 260 (456)
Q Consensus 190 ~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~---~~~~~~~~~~~~~-~~~~~~p~~~---~~g~--~~~~~~l~~G~ 260 (456)
..+++..++.||||||.|--+.+.+..+..+.. .....+.+..... .++...|-.. ..+. ...+.....+.
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGS 166 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCc
Confidence 345677889999999998767776665554432 2333221222222 2333333221 1111 22233334444
Q ss_pred eEEEec-CCCHHHHHHHHH----HhcceeEEecHHHHHHHhcCCCCCCC--CCC-CceEEEecC------CCCC-HHHHH
Q 012774 261 TAVVMQ-RFDLKMMLKAVE----EFRVTHAAVTPPIVVAMSKGGSTDGY--DLS-SLETVACGA------APLG-KDTIM 325 (456)
Q Consensus 261 ~~~~~~-~~~~~~~~~~i~----~~~~t~~~~~P~~~~~l~~~~~~~~~--~l~-~lr~v~~gG------~~~~-~~~~~ 325 (456)
...+-. .+|.+.+...+. +.++..+++.|.++..++...+.... .|+ ..+.+..|| +.++ +++.+
T Consensus 167 ~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~~ 246 (365)
T PF04443_consen 167 RFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFYA 246 (365)
T ss_pred eeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHHH
Confidence 433322 367777777664 45778889988887777665443333 343 456666666 5676 58888
Q ss_pred HHHHhCCCC----ceEeccCccccccccccccCCCCCCCCCccccccCCcEEEEEcCCCCCCCCCCCcceEEEecCCccc
Q 012774 326 AFASKFPKV----VLVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLEAKIVDPETGDSLPPGKEGELSIRGPTIMK 401 (456)
Q Consensus 326 ~~~~~~~~~----~i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g~~~~~ 401 (456)
.+.+.| |+ .+++.||+||...+.+.+. .-..++|-. +.|+|+++.++++.|+.|-|.+-.+...
T Consensus 247 ~l~~~~-Gv~~~~~i~~~ygmtEl~s~~~~~~---------~~~~~~p~w-V~iRDp~tl~~~~~Ge~Gli~vidl~~~- 314 (365)
T PF04443_consen 247 RLQEVF-GVIPIENIYDMYGMTELNSQAYECG---------HGHFHVPPW-VIIRDPETLEPLPPGETGLIQVIDLANT- 314 (365)
T ss_pred HHHHHH-CCCCHHHeeeeeeccccchhheeCC---------CCcccCCCe-EEEECCCCCcCCCCCCeeEEEEEccccc-
Confidence 888888 54 7999999999876554421 111123322 7788999999999999999998766421
Q ss_pred ccCCCccccccccCCCCeeeccceEEEccC--------CcEEEeccccc
Q 012774 402 GYVGEPEVTSATLLPDGWMRTGDLCYIDED--------GFLFIVDRLKD 442 (456)
Q Consensus 402 gy~~~~~~~~~~~~~~g~~~TGDl~~~~~d--------g~l~~~GR~~d 442 (456)
.| -+..-|.|+|.+..+ .++.++||.+.
T Consensus 315 s~-------------p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~ 350 (365)
T PF04443_consen 315 SY-------------PGFILTEDLGVLHGDDDCGCRKGKYFEVLGRADG 350 (365)
T ss_pred CC-------------CcEEEEcceeeecCCCCCCCccCCEEEEEeCCCC
Confidence 11 233679999988654 27999999863
No 132
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.18 E-value=9.7e-06 Score=81.07 Aligned_cols=124 Identities=18% Similarity=0.168 Sum_probs=69.6
Q ss_pred CCCceEEEecCCCCCHHHHHHHHHhCCCCc-eEeccCccccccccccccCCCCCCCCCccccccCCc-EEEEEcCCC---
Q 012774 306 LSSLETVACGAAPLGKDTIMAFASKFPKVV-LVQAYGLTESTAGVFRTVGPDECRRWGSTGRLSAGL-EAKIVDPET--- 380 (456)
Q Consensus 306 l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~-i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~i~d~~~--- 380 (456)
+++++.|.+.+..-...-.+.+++.+++.. +...|++||+- +.+. .. .. ...+.+.++. -.+.++.++
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg~-i~i~-~~---~~--~~~~~l~~~~~ffEFip~~~~~~ 338 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEGF-IGIP-LD---PE--DPGYVLAPDSGFFEFIPVDEDEQ 338 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTEE-EEEE-S----CC--C--EEE-TTSSEEEEEE-STT--
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccceE-EEEe-cC---CC--CCceEeecCCeEEEEEeccCCcc
Confidence 678997666555545566677788777755 44579999953 2221 11 11 1122333322 445555332
Q ss_pred -----C-----CCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEcc--CC--cEEEecccccceee
Q 012774 381 -----G-----DSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDE--DG--FLFIVDRLKDLIKY 446 (456)
Q Consensus 381 -----~-----~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~--dg--~l~~~GR~~d~ik~ 446 (456)
. ..+..|+.-||+|+..+ |.| .|+.||++++.. ++ .+.|.||.+.++.+
T Consensus 339 ~~~~~~~~l~~~ele~G~~YelviTt~~---GLy--------------RY~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l 401 (528)
T PF03321_consen 339 NPSEQPKTLLLHELEVGEEYELVITTNS---GLY--------------RYRIGDVVRVTGFYNQTPRIEFVGRRGQVLSL 401 (528)
T ss_dssp -----SSSEEGGG--TT-EEEEEEESTT---S-S--------------SEEECEEEEEEEEETTEEEEEEEEETTEEE-S
T ss_pred cccCCCceecHHHhcCCCeEEEEEeccc---cee--------------eeecCCEEEEeeccCCCcEEEEeccCCceeec
Confidence 1 13556888899998643 222 389999999942 34 79999999999999
Q ss_pred CCeeecC
Q 012774 447 KGYQVLP 453 (456)
Q Consensus 447 ~G~~v~p 453 (456)
.|+|++.
T Consensus 402 ~gEkl~e 408 (528)
T PF03321_consen 402 FGEKLSE 408 (528)
T ss_dssp SS--EEH
T ss_pred ceeecCH
Confidence 9999874
No 133
>PRK09188 serine/threonine protein kinase; Provisional
Probab=98.04 E-value=2.6e-06 Score=80.42 Aligned_cols=34 Identities=24% Similarity=0.325 Sum_probs=31.1
Q ss_pred CCCeeeccceEEE-ccCCcEEEecccccceeeCC---eeecCC
Q 012774 416 PDGWMRTGDLCYI-DEDGFLFIVDRLKDLIKYKG---YQVLPL 454 (456)
Q Consensus 416 ~~g~~~TGDl~~~-~~dg~l~~~GR~~d~ik~~G---~~v~p~ 454 (456)
.+|||+|||+|++ |+||+|+|.||.| +| ++|+|.
T Consensus 207 ~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~ 244 (365)
T PRK09188 207 SRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA 244 (365)
T ss_pred cCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH
Confidence 5899999999998 7999999999997 88 789985
No 134
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.95 E-value=0.0016 Score=65.17 Aligned_cols=128 Identities=14% Similarity=0.096 Sum_probs=79.3
Q ss_pred CCCceEEEecCCCCCHHHHHHHHHhCCCCceEe-ccCccccccccccccCCCCCCCCCccccccCCcE-EEEEcCCCCC-
Q 012774 306 LSSLETVACGAAPLGKDTIMAFASKFPKVVLVQ-AYGLTESTAGVFRTVGPDECRRWGSTGRLSAGLE-AKIVDPETGD- 382 (456)
Q Consensus 306 l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~-~yG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~-~~i~d~~~~~- 382 (456)
.+++++|-+....-...-...++..++++++.. .|++||+-.-+-. .+. +..........|+.. .+.++.+++.
T Consensus 292 WP~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~~ginl--~p~-~~p~~~sy~L~p~~~yFEFip~~~~~~ 368 (606)
T PLN02247 292 WPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYFGINL--KPL-SDPSDVSYTLLPNMAYFEFLPVDKNNG 368 (606)
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccceEEEecc--CcC-CCccCCceeecCCcEEEEEeecCCCcc
Confidence 578888776555556677778877778887666 7999996433221 111 111112233344442 3444322211
Q ss_pred ----------------------------CCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEc----c
Q 012774 383 ----------------------------SLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYID----E 430 (456)
Q Consensus 383 ----------------------------~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~----~ 430 (456)
.+..|+.-||+|+.-+ |.| .|+.||+.++. .
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~YelVvTt~~---GLY--------------RYrlGDvv~V~GF~n~ 431 (606)
T PLN02247 369 EVIHFVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYELVVTTFT---GLY--------------RYRVGDILMVTGFYNN 431 (606)
T ss_pred cccccccccccccccccccccCceecHHHccCCCeEEEEEEecC---ceE--------------EEecCCEEEEeeecCC
Confidence 2445777788886532 111 48999999883 3
Q ss_pred CCcEEEecccccceeeCCeeecC
Q 012774 431 DGFLFIVDRLKDLIKYKGYQVLP 453 (456)
Q Consensus 431 dg~l~~~GR~~d~ik~~G~~v~p 453 (456)
.-.|.|++|.+.+..+.|+|..-
T Consensus 432 ~P~~~Fv~R~~~vlsi~gEK~tE 454 (606)
T PLN02247 432 APQFRFVQRRNVVLSIDTDKTNE 454 (606)
T ss_pred CceEEEEecCCceeecccccCCH
Confidence 45799999999999999999764
No 135
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.84 E-value=0.00068 Score=67.66 Aligned_cols=127 Identities=16% Similarity=0.116 Sum_probs=77.8
Q ss_pred CCCceEEEecCCCCCHHHHHHHHHhCCCCceEe-ccCccccccccccccCCCCCCCCCc-cccccCCcE-EEEEcCC--C
Q 012774 306 LSSLETVACGAAPLGKDTIMAFASKFPKVVLVQ-AYGLTESTAGVFRTVGPDECRRWGS-TGRLSAGLE-AKIVDPE--T 380 (456)
Q Consensus 306 l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~i~~-~yG~tE~~~~~~~~~~~~~~~~~~~-~G~~~~~~~-~~i~d~~--~ 380 (456)
.+++++|-+....-...-...++..++++++.. .|++||+-.-+-. .+. .++.. .....|+.. .+.++.+ +
T Consensus 303 WP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~~~ginl--~P~--~~p~~~sy~L~p~~~yFEFip~~~~~ 378 (612)
T PLN02620 303 WPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNL--NPL--CKPSEVSYTLIPTMAYFEFLPVHRNN 378 (612)
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccceEEEecc--CCC--CCcccceeeecCCcEEEEEeeccCcc
Confidence 578888776555555666677777777887665 6999996433221 111 11122 223334432 3444311 1
Q ss_pred C-----------------C-----CCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEc----cCCcE
Q 012774 381 G-----------------D-----SLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYID----EDGFL 434 (456)
Q Consensus 381 ~-----------------~-----~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~----~dg~l 434 (456)
+ + .+..|+.-||+|+..+ |.| .|+.||+.++. ..-.|
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvTt~~---GLy--------------RYrlGDvv~V~Gf~n~~P~~ 441 (612)
T PLN02620 379 GVTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVVTTYA---GLY--------------RYRVGDVLRVAGFKNKAPQF 441 (612)
T ss_pred cccccccccccccccccCccccHHHccCCCeEEEEEEecC---ceE--------------EEecCCEEEEeeecCCCceE
Confidence 1 1 1446777788887532 111 48999999883 33579
Q ss_pred EEecccccceeeCCeeecC
Q 012774 435 FIVDRLKDLIKYKGYQVLP 453 (456)
Q Consensus 435 ~~~GR~~d~ik~~G~~v~p 453 (456)
.|++|.+-+..+.|+|..-
T Consensus 442 ~Fv~R~~~~lsi~gEK~tE 460 (612)
T PLN02620 442 SFICRKNVVLSIDSDKTDE 460 (612)
T ss_pred EEEeecCceeecccccCCH
Confidence 9999999999999999764
No 136
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=97.78 E-value=0.00038 Score=70.04 Aligned_cols=124 Identities=17% Similarity=0.151 Sum_probs=72.7
Q ss_pred CCC---ceEEEecCCCCCHHHHHHHHHhCCCCc-eEeccCccccccccccccCCCCCCCCCccccc--cCCcEEEEEcCC
Q 012774 306 LSS---LETVACGAAPLGKDTIMAFASKFPKVV-LVQAYGLTESTAGVFRTVGPDECRRWGSTGRL--SAGLEAKIVDPE 379 (456)
Q Consensus 306 l~~---lr~v~~gG~~~~~~~~~~~~~~~~~~~-i~~~yG~tE~~~~~~~~~~~~~~~~~~~~G~~--~~~~~~~i~d~~ 379 (456)
+++ +..+..||-. .-...++..+++.. +...|++||+-. .+- ..+ ...+...+.. +.+.-.+.++.+
T Consensus 301 WPnl~~i~~~~~G~~~---~Y~~~l~~~~g~~~~~~~~Y~ASEg~~-gi~-~~~--~~~p~~~~~~l~~~~~ffEFiP~~ 373 (597)
T PLN02249 301 WPNTKYLDVIVTGAMA---QYIPMLEYYSGGLPMASTIYASSESYF-GIN-LNP--MCKPSEVSYTIMPNMAYFEFLPHN 373 (597)
T ss_pred CCCCCeEEEEecCChH---HHHHHHHHHcCCCccccccccccceEE-Eee-cCC--CCCCCCcceEecCCcEEEEeeecc
Confidence 566 5555666644 55566666666654 566899999532 221 111 0011112211 224445555311
Q ss_pred -CC------------CCCCCCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEcc----CCcEEEeccccc
Q 012774 380 -TG------------DSLPPGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDE----DGFLFIVDRLKD 442 (456)
Q Consensus 380 -~~------------~~~~~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~----dg~l~~~GR~~d 442 (456)
.+ ..+..|+.-||+|+..+ |-| .|+.||+.++.. -=.|.|.||.+.
T Consensus 374 ~~~~~~~~~~~~v~l~eVe~G~~Y~lVvTT~~---GLy--------------RY~iGDvVrvtgf~~~~P~i~F~gR~~~ 436 (597)
T PLN02249 374 HDGDGALDETSLVELADVEVGKEYELVITTYA---GLY--------------RYRVGDILRVTGFHNSAPQFKFIRRKNV 436 (597)
T ss_pred cCCcccCCCCcEecHHHcCCCCeEEEEEEccc---cee--------------EeecCCEEEEeeccCCCcEEEEEccCCc
Confidence 11 12446777788887532 111 389999999842 236899999999
Q ss_pred ceeeCCeeecC
Q 012774 443 LIKYKGYQVLP 453 (456)
Q Consensus 443 ~ik~~G~~v~p 453 (456)
++.+.|+|+.-
T Consensus 437 ~ls~~GEKl~e 447 (597)
T PLN02249 437 LLSIESDKTDE 447 (597)
T ss_pred ceecccccCCH
Confidence 99999999864
No 137
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=95.84 E-value=0.12 Score=49.74 Aligned_cols=87 Identities=17% Similarity=0.101 Sum_probs=72.1
Q ss_pred eecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCC--CcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEE
Q 012774 69 RVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (456)
Q Consensus 69 ~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~--~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 146 (456)
-+|+.|+..-+..+|+.|.. .|..+||+|.++..-+ ..-+-..+|+.++|+.++|+.+. ..+.-..++++.++.+|
T Consensus 109 ~~t~~D~~~wa~~~aR~~~~-~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g-~~~~~~~l~~df~~tvI 186 (438)
T COG1541 109 GYTAKDIERWAELLARSLYS-AGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGG-NTERQLELMKDFKPTVI 186 (438)
T ss_pred ecCHHHHHHHHHHHHHHHHH-ccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCc-cHHHHHHHHHhcCCcEE
Confidence 39999999999999999999 8999999999876621 12267889999999999999873 34566778999999999
Q ss_pred EEccchHHHHh
Q 012774 147 FATSSVVHKLA 157 (456)
Q Consensus 147 i~~~~~~~~~~ 157 (456)
.+.++..-.+.
T Consensus 187 ~~tps~~l~la 197 (438)
T COG1541 187 AATPSYLLYLA 197 (438)
T ss_pred EEChHHHHHHH
Confidence 99988765543
No 138
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=87.62 E-value=4.5 Score=39.66 Aligned_cols=86 Identities=14% Similarity=0.074 Sum_probs=65.6
Q ss_pred eecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCC--cHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEE
Q 012774 69 RVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (456)
Q Consensus 69 ~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~--~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 146 (456)
.+|..++......+++.+.. .|+++||++......+. .....+++....|+..++++... .+.+...++..++.++
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~-~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l 171 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRA-AGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDII 171 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHH-cCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEE
Confidence 37888887777777778877 89999999887665442 22334677889999999887654 5778889999999999
Q ss_pred EEccchHHHH
Q 012774 147 FATSSVVHKL 156 (456)
Q Consensus 147 i~~~~~~~~~ 156 (456)
+..+.....+
T Consensus 172 ~~~Ps~l~~L 181 (422)
T TIGR02155 172 MVTPSYMLNL 181 (422)
T ss_pred EEcHHHHHHH
Confidence 9988766544
No 139
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=86.95 E-value=6.3 Score=38.98 Aligned_cols=81 Identities=12% Similarity=0.182 Sum_probs=61.5
Q ss_pred eecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCc--HHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEE
Q 012774 69 RVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE--IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (456)
Q Consensus 69 ~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~--~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 146 (456)
.+|..++...+...+..+.. .|+.+||++.++.+-+.. .....+++...|+.++|... ......+++..++.++
T Consensus 105 ~~T~~dl~~~~~~~~r~~~~-~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l 180 (445)
T TIGR03335 105 FLTWDDWKRYAEKYARSFVS-QGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGI 180 (445)
T ss_pred eecHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEE
Confidence 48999999888888888887 899999999988765543 23455788899998887653 2344677888999988
Q ss_pred EEccchH
Q 012774 147 FATSSVV 153 (456)
Q Consensus 147 i~~~~~~ 153 (456)
+..+...
T Consensus 181 ~~~ps~l 187 (445)
T TIGR03335 181 VASVFKL 187 (445)
T ss_pred EECHHHH
Confidence 8765543
No 140
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=81.63 E-value=16 Score=36.63 Aligned_cols=97 Identities=15% Similarity=0.122 Sum_probs=70.0
Q ss_pred CCCcEEEECC---CC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcH-HHHHHHHHHhCCeEecCCC
Q 012774 56 DDTVALINSV---TG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEI-PILYFSLLSLGVIISPANP 127 (456)
Q Consensus 56 p~~~A~~~~~---~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~-~~~~la~~~~G~~~v~l~~ 127 (456)
++.+|++... +| -.+|++.+...+..... . .+++++|++....+-.... ....++++..|+..+..+.
T Consensus 166 ~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~---~-~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~ 241 (521)
T PRK06187 166 ENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCA---W-LKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRR 241 (521)
T ss_pred ccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHH---h-hCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCC
Confidence 4566766432 22 25899998876666555 3 5789999988877644322 3344558888998887766
Q ss_pred CCCHHHHHHHhhhcCCeEEEEccchHHHHh
Q 012774 128 VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (456)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 157 (456)
. +++.+...+++.++..+++.+.....+.
T Consensus 242 ~-~~~~~~~~l~~~~~t~l~~~p~~~~~l~ 270 (521)
T PRK06187 242 F-DPENLLDLIETERVTFFFAVPTIWQMLL 270 (521)
T ss_pred C-CHHHHHHHHHHhCCeEEEchHHHHHHHH
Confidence 5 8889999999999999999888776654
No 141
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=78.23 E-value=15 Score=36.84 Aligned_cols=97 Identities=21% Similarity=0.179 Sum_probs=70.3
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCC--cHHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~--~~~~~~la~~~~G~~~v~l~ 126 (456)
++.+|++.. .+| -.+|+..+...+..+... .+++++|++....+-.. .+...+++++..|+.+++.
T Consensus 165 ~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~- 239 (513)
T PRK07656 165 PDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEY----LGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL- 239 (513)
T ss_pred CCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHh----hCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-
Confidence 567776543 222 358999887665544332 57789999988776433 3445678899999988875
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEccchHHHHh
Q 012774 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (456)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 157 (456)
+..+++.+...+++.++.++...+.....+.
T Consensus 240 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 270 (513)
T PRK07656 240 PVFDPDEVFRLIETERITVLPGPPTMYNSLL 270 (513)
T ss_pred CcCCHHHHHHHHHHhCCeEEechHHHHHHHH
Confidence 5678889999999999999998887776654
No 142
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=78.04 E-value=15 Score=32.48 Aligned_cols=76 Identities=11% Similarity=0.085 Sum_probs=53.2
Q ss_pred CCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCC--cHHHHHHHHHHhCCeEecCCCCCCHHH
Q 012774 56 DDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPANPVNTESE 133 (456)
Q Consensus 56 p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~--~~~~~~la~~~~G~~~v~l~~~~~~~~ 133 (456)
++.+|++... +. .|...+...+ .. .|+.++|++. .+|-.. .+...+++++.+|+..+.+ +..++++
T Consensus 149 ~~D~a~l~yT-sg-~~~~~~~~~~-------~~-~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~ 216 (227)
T TIGR03089 149 ATAPALVAGG-GE-WTGAELVAAA-------RA-AGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPAR 216 (227)
T ss_pred CCcceeeecc-cc-ccHHHHHHHH-------hh-cCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHH
Confidence 5677776542 22 2444443332 44 6889999999 887554 4445789999999998888 6889988
Q ss_pred HHHHhhhcCC
Q 012774 134 ISRQIQLSNP 143 (456)
Q Consensus 134 l~~~l~~~~~ 143 (456)
+-..+++.++
T Consensus 217 ~l~~i~~~~v 226 (227)
T TIGR03089 217 LDQIAETERV 226 (227)
T ss_pred HHHHHHhhcC
Confidence 8888887664
No 143
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=76.12 E-value=26 Score=34.35 Aligned_cols=116 Identities=12% Similarity=0.153 Sum_probs=81.2
Q ss_pred CCCHHHHhhhcccCC--------CCCCCCCcEEEEC---CC----CceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEE
Q 012774 37 PISAVDYVSSLRATL--------PWRDDDTVALINS---VT----GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVL 101 (456)
Q Consensus 37 ~~~~~~~l~~~~~~~--------~~~~p~~~A~~~~---~~----~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~ 101 (456)
.+.+.+++....+.. .|-.||..+-+.. .+ +.++|.-++.+.+..++..+ |+...+++++-
T Consensus 206 a~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~----g~~e~~~i~~~ 281 (596)
T KOG1177|consen 206 AFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARA----GYNEKHRICIP 281 (596)
T ss_pred ceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHh----CcCcceEEEec
Confidence 366667666443211 4555887776543 22 35799999999988776544 66654455443
Q ss_pred cC--CCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHH
Q 012774 102 ST--NSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (456)
Q Consensus 102 ~~--~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 156 (456)
.| ++.-.++..+|++..|+..|.-+|...+...-+.+.+.+...++..+...-.+
T Consensus 282 ~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dl 338 (596)
T KOG1177|consen 282 NPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDL 338 (596)
T ss_pred CchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHH
Confidence 32 33455777888899999999989999999999999999999999887665444
No 144
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=75.57 E-value=28 Score=35.37 Aligned_cols=97 Identities=11% Similarity=0.014 Sum_probs=68.1
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCC--CcHHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~--~~~~~~~la~~~~G~~~v~l~ 126 (456)
++.+|++.. .+| -.+|++.+...+.... .. .++.++|++....|-. ..+...++..+..|+..+...
T Consensus 182 ~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~---~~-~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~ 257 (539)
T PRK06334 182 PEDVAVILFTSGTEKLPKGVPLTHANLLANQRACL---KF-FSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAY 257 (539)
T ss_pred cCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHH---Hh-cCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEec
Confidence 677887643 222 3589998876654433 23 5778899888777632 333344577778898877665
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEccchHHHH
Q 012774 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (456)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 156 (456)
....++.+...++..++..+...+.....+
T Consensus 258 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 287 (539)
T PRK06334 258 NPLYPKKIVEMIDEAKVTFLGSTPVFFDYI 287 (539)
T ss_pred CCCCHHHHHHHHHHhCCcEEEecHHHHHHH
Confidence 557788999999999999999888776654
No 145
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=74.19 E-value=13 Score=36.06 Aligned_cols=98 Identities=21% Similarity=0.259 Sum_probs=69.8
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCC--cHHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~--~~~~~~la~~~~G~~~v~l~ 126 (456)
++++|++.. .+| -.+|++.+...+..+. +....+++ |++...+|-+. .++..+++++..|+..+..+
T Consensus 154 ~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~--~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 229 (417)
T PF00501_consen 154 PDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALA--LPEYFGLG--DRILSFLPLSHIFGLISALLAALFSGATLVLPS 229 (417)
T ss_dssp TTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHH--HHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEES
T ss_pred ccceeEeeccccccccccccccccccccccccccc--cccccccC--ceEEeeccccccccccccccccccccccccccc
Confidence 688887653 223 3589999999988877 44312333 66666655443 33367899999999999887
Q ss_pred CCCC--HHHHHHHhhhcCCeEEEEccchHHHHh
Q 012774 127 PVNT--ESEISRQIQLSNPVIAFATSSVVHKLA 157 (456)
Q Consensus 127 ~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~ 157 (456)
.... ++.+...+++.++..+++.+.....+.
T Consensus 230 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~ 262 (417)
T PF00501_consen 230 PFDLFDPESLLELISRYKPTILFAVPSMLEALL 262 (417)
T ss_dssp SHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHH
T ss_pred cccccccccchhccccccccccccccccccccc
Confidence 6544 567888999999999999988877663
No 146
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=73.26 E-value=45 Score=32.09 Aligned_cols=98 Identities=18% Similarity=0.157 Sum_probs=70.9
Q ss_pred CCCcEEEECC---CC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCc-HHHHHHHHHHhCCeEecCCC
Q 012774 56 DDTVALINSV---TG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANP 127 (456)
Q Consensus 56 p~~~A~~~~~---~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~-~~~~~la~~~~G~~~v~l~~ 127 (456)
++++|++... +| ..+|++.+...+..+.. . .+++++|++....+.... .+..+++.+..|+..+..+.
T Consensus 119 ~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~---~-~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~ 194 (408)
T TIGR01733 119 PDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLAR---R-YGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPE 194 (408)
T ss_pred CCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHH---h-cCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcCh
Confidence 5677776432 22 35788888877776655 2 566789999887765543 45566788888988887766
Q ss_pred CCC--HHHHHHHhhhcCCeEEEEccchHHHHh
Q 012774 128 VNT--ESEISRQIQLSNPVIAFATSSVVHKLA 157 (456)
Q Consensus 128 ~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~ 157 (456)
... +..+..+++..++..+++.+.....+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~ 226 (408)
T TIGR01733 195 DEERDAALLAALIAEHPVTVLNLTPSLLALLA 226 (408)
T ss_pred hhccCHHHHHHHHHHcCceEEEeCHHHHHHHH
Confidence 554 788899999999999999888776654
No 147
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=70.18 E-value=41 Score=34.44 Aligned_cols=98 Identities=9% Similarity=0.041 Sum_probs=68.5
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCC--cHHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~--~~~~~~la~~~~G~~~v~l~ 126 (456)
++.+|++.. .+| -.+|++.+...+... ... .++.++|++....+... .....+++.+..|+..+...
T Consensus 204 ~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~---~~~-~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~ 279 (570)
T PRK04319 204 REDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTG---KYV-LDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDG 279 (570)
T ss_pred CCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHH---HHh-cCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEEC
Confidence 567776542 222 358888876544333 233 57788998766554332 23456778889999888777
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEccchHHHHh
Q 012774 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (456)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 157 (456)
...+++.+...+++.++.++...+.....+.
T Consensus 280 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 310 (570)
T PRK04319 280 GRFSPERWYRILEDYKVTVWYTAPTAIRMLM 310 (570)
T ss_pred CCCCHHHHHHHHHHcCCeEEEeCHHHHHHHH
Confidence 7788999999999999999999887776654
No 148
>PRK08315 AMP-binding domain protein; Validated
Probab=70.00 E-value=46 Score=33.85 Aligned_cols=83 Identities=4% Similarity=0.040 Sum_probs=61.1
Q ss_pred eecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCC--CCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEE
Q 012774 69 RVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTN--SIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (456)
Q Consensus 69 ~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~--~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 146 (456)
.+|++.+...+..+. ...+++++|++....+- ...++..+++.+..|+..+......++..+...+++.++.++
T Consensus 218 ~~s~~~l~~~~~~~~----~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~ 293 (559)
T PRK08315 218 TLTHRNILNNGYFIG----EAMKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTAL 293 (559)
T ss_pred EeeHHHHHHHHHHHH----HhcCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEE
Confidence 588888865555433 33578999998877664 344556678888899888755566778888899999999999
Q ss_pred EEccchHHH
Q 012774 147 FATSSVVHK 155 (456)
Q Consensus 147 i~~~~~~~~ 155 (456)
+..+.....
T Consensus 294 ~~~P~~~~~ 302 (559)
T PRK08315 294 YGVPTMFIA 302 (559)
T ss_pred ecchHHHHH
Confidence 887766543
No 149
>PRK12583 acyl-CoA synthetase; Provisional
Probab=69.96 E-value=54 Score=33.27 Aligned_cols=96 Identities=11% Similarity=0.106 Sum_probs=67.0
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCC--CCcHHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTN--SIEIPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~--~~~~~~~~la~~~~G~~~v~l~ 126 (456)
++.+|++.. .+| -.+|+..+...+..+... .+++++|++....+- .......+++++..|+.++...
T Consensus 200 ~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~----~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~ 275 (558)
T PRK12583 200 RDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAES----LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPN 275 (558)
T ss_pred CCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHH----hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeec
Confidence 456665432 223 368998886655544333 577889998876653 3556677788888999887545
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEccchHHH
Q 012774 127 PVNTESEISRQIQLSNPVIAFATSSVVHK 155 (456)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 155 (456)
...++..+.+.+++.++..++..+.....
T Consensus 276 ~~~~~~~~~~~i~~~~~t~l~~~P~~~~~ 304 (558)
T PRK12583 276 EAFDPLATLQAVEEERCTALYGVPTMFIA 304 (558)
T ss_pred CCCCHHHHHHHHHHcCCeEEeccHHHHHH
Confidence 55678888899999999999888776543
No 150
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=68.51 E-value=58 Score=29.82 Aligned_cols=95 Identities=14% Similarity=0.077 Sum_probs=58.8
Q ss_pred CceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCC----CHHHHHHHhhhcC
Q 012774 67 GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVN----TESEISRQIQLSN 142 (456)
Q Consensus 67 ~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~----~~~~l~~~l~~~~ 142 (456)
+..+-.+=+ .|...+|..|++ . |..|..++.+....... .+...|..+..++-.. +.+++..+++..+
T Consensus 9 ~~~iG~GHv-~Rcl~LA~~l~~-~----g~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~ 80 (279)
T TIGR03590 9 SSEIGLGHV-MRCLTLARALHA-Q----GAEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEK 80 (279)
T ss_pred CccccccHH-HHHHHHHHHHHH-C----CCEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcC
Confidence 334444433 367788999976 3 44566666655554433 3357788777775432 3457888899999
Q ss_pred CeEEEEcc-----chHHHHhccCCeEEEEcCC
Q 012774 143 PVIAFATS-----SVVHKLAKLKHRTILIDSP 169 (456)
Q Consensus 143 ~~~vi~~~-----~~~~~~~~~~~~~~~~~~~ 169 (456)
+.++|+|. +....++....+++++++.
T Consensus 81 ~d~vV~D~y~~~~~~~~~~k~~~~~l~~iDD~ 112 (279)
T TIGR03590 81 FDILIVDHYGLDADWEKLIKEFGRKILVIDDL 112 (279)
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCeEEEEecC
Confidence 99999984 2233444445566777653
No 151
>PLN03051 acyl-activating enzyme; Provisional
Probab=68.10 E-value=51 Score=33.08 Aligned_cols=97 Identities=13% Similarity=0.058 Sum_probs=65.5
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCc-HHHHHHHHHHhCCeEecCCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANP 127 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~-~~~~~la~~~~G~~~v~l~~ 127 (456)
++.+|++-. .+| -.+|+..+...+... ... .++.++|++....+-... ....+++++..|+..+....
T Consensus 118 ~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~---~~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~ 193 (499)
T PLN03051 118 VESVTNILFSSGTTGEPKAIPWTHLSPLRCASDG---WAH-MDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGG 193 (499)
T ss_pred ccceEEEEeCCCCCCCCceEEEccchHHHHHHHH---HHh-cCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCC
Confidence 466776542 222 358888765544322 233 578889988766654321 12356788899999887765
Q ss_pred CCCHHHHHHHhhhcCCeEEEEccchHHHH
Q 012774 128 VNTESEISRQIQLSNPVIAFATSSVVHKL 156 (456)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 156 (456)
...++.+...+++.++.++...+.....+
T Consensus 194 ~~~~~~~~~~i~~~~vt~~~~vP~~~~~l 222 (499)
T PLN03051 194 APLGRGFGKFVQDAGVTVLGLVPSIVKAW 222 (499)
T ss_pred CCCcHHHHHHHHHhCCcEEEeCHHHHHHH
Confidence 55668889999999999999888776554
No 152
>PLN02246 4-coumarate--CoA ligase
Probab=67.42 E-value=44 Score=33.86 Aligned_cols=100 Identities=13% Similarity=0.078 Sum_probs=68.3
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCC--cHHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~--~~~~~~la~~~~G~~~v~l~ 126 (456)
|+++|++.. .+| -.+|++.+...+........+..++.++|++....+-.. .+...+++.+..|+.++..+
T Consensus 178 ~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 257 (537)
T PLN02246 178 PDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIMP 257 (537)
T ss_pred ccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEeC
Confidence 677776542 222 358998887766554443332367889999887766432 23344677888999988876
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEccchHHHH
Q 012774 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (456)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 156 (456)
. ...+.+...++..++..+...+.....+
T Consensus 258 ~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l 286 (537)
T PLN02246 258 K-FEIGALLELIQRHKVTIAPFVPPIVLAI 286 (537)
T ss_pred C-CCHHHHHHHHHHhCceEEEcchHHHHHH
Confidence 4 5778888999999999888877665554
No 153
>PRK08308 acyl-CoA synthetase; Validated
Probab=63.16 E-value=75 Score=30.83 Aligned_cols=97 Identities=15% Similarity=0.181 Sum_probs=68.1
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCC--CcHHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~--~~~~~~~la~~~~G~~~v~l~ 126 (456)
++.+|++.. .+| ..+|++.+...+..+... .++..+|++....+-. ..++..++..+..|+..+..+
T Consensus 100 ~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~----~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~ 175 (414)
T PRK08308 100 AEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEA----LNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT 175 (414)
T ss_pred CCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHHh----hCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC
Confidence 566776543 222 358999988766655543 4567888887776654 334566788889999877664
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEccchHHHHh
Q 012774 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (456)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 157 (456)
..++..+...++..++.+++..+.....+.
T Consensus 176 -~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~ 205 (414)
T PRK08308 176 -NKNPKFALNILRNTPQHILYAVPLMLHILG 205 (414)
T ss_pred -CCCHHHHHHHHHHhCCeEEEcCHHHHHHHH
Confidence 456778888899999999888877766554
No 154
>PRK08316 acyl-CoA synthetase; Validated
Probab=62.75 E-value=75 Score=31.87 Aligned_cols=84 Identities=14% Similarity=0.094 Sum_probs=61.3
Q ss_pred eecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCC--cHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEE
Q 012774 69 RVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (456)
Q Consensus 69 ~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~--~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 146 (456)
.+|++.+...+. ..... .+++++|++....+-.. .+...+++++..|+..++.+ ...++.+...+++.++.++
T Consensus 190 ~~s~~~l~~~~~---~~~~~-~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 264 (523)
T PRK08316 190 MLTHRALIAEYV---SCIVA-GDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILD-APDPELILRTIEAERITSF 264 (523)
T ss_pred EEecHHHHHHHH---HHHHH-hCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEec-CCCHHHHHHHHHHhCCeEE
Confidence 588888765533 33444 67899999988776433 23344667788899988875 3568889999999999999
Q ss_pred EEccchHHHHh
Q 012774 147 FATSSVVHKLA 157 (456)
Q Consensus 147 i~~~~~~~~~~ 157 (456)
++.+.....+.
T Consensus 265 ~~~P~~~~~l~ 275 (523)
T PRK08316 265 FAPPTVWISLL 275 (523)
T ss_pred EeCHHHHHHHH
Confidence 99887765553
No 155
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=61.05 E-value=57 Score=31.80 Aligned_cols=95 Identities=12% Similarity=0.086 Sum_probs=66.3
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCC-cHHHHHHHHHHhCCeEecCCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI-EIPILYFSLLSLGVIISPANP 127 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~-~~~~~~la~~~~G~~~v~l~~ 127 (456)
++++|++.. .+| ..+|++.+...+...+.. .+++++|++....+-.. ..+..+++++..|+..+..++
T Consensus 110 ~~~~~~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~----~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~ 185 (436)
T TIGR01923 110 MDQIATLMFTSGTTGKPKAVPHTFRNHYASAVGSKEN----LGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDK 185 (436)
T ss_pred cCceEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHhh----cCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecch
Confidence 456676532 222 368999988776665543 57889999887766432 223346788899998887754
Q ss_pred CCCHHHHHHHhhhcCCeEEEEccchHHHHh
Q 012774 128 VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (456)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 157 (456)
. +.+...+++.++.++...+.....+.
T Consensus 186 ~---~~~~~~l~~~~~t~~~~~P~~l~~l~ 212 (436)
T TIGR01923 186 F---NQLLEMIANERVTHISLVPTQLNRLL 212 (436)
T ss_pred H---HHHHHHHHHhCCeEEEeHHHHHHHHH
Confidence 3 37888899999999998887766554
No 156
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=59.72 E-value=1.1e+02 Score=31.19 Aligned_cols=96 Identities=15% Similarity=0.108 Sum_probs=66.4
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCC-cHHHHHHHHHHhCCeEecCCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI-EIPILYFSLLSLGVIISPANP 127 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~-~~~~~~la~~~~G~~~v~l~~ 127 (456)
++++|++-. .+| -.+|+..+...+.... .. .++.++|++....|-.. .-+...++.+..|+..+.. +
T Consensus 171 ~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~---~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~ 245 (563)
T PLN02860 171 PDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKI---AI-VGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-P 245 (563)
T ss_pred CCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHH---hh-cCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-C
Confidence 677776532 233 3588888865544432 23 57889998887776332 2233567778889887765 4
Q ss_pred CCCHHHHHHHhhhcCCeEEEEccchHHHH
Q 012774 128 VNTESEISRQIQLSNPVIAFATSSVVHKL 156 (456)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 156 (456)
..++..+...+++.++..+...+.....+
T Consensus 246 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l 274 (563)
T PLN02860 246 KFDAKAALQAIKQHNVTSMITVPAMMADL 274 (563)
T ss_pred CCCHHHHHHHHHHhCCeeEEeChHHHHHH
Confidence 67888999999999999999988776654
No 157
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=59.37 E-value=86 Score=31.37 Aligned_cols=85 Identities=12% Similarity=0.095 Sum_probs=64.4
Q ss_pred ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCc-HHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEE
Q 012774 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (456)
Q Consensus 68 ~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~-~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 146 (456)
..+|+..+...+..+... .++.++|++...++-... .+..+++++..|+..+..+ ...++.+...++..++.++
T Consensus 179 v~~t~~~l~~~~~~~~~~----~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 253 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATY----LENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLHD-YLLPRDVLKALEKHGITGL 253 (515)
T ss_pred EEEecHHHHHHHHHHHHH----hCCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHcCCceE
Confidence 358999988776665533 456889999888875432 3446678889999888664 5678889999999999999
Q ss_pred EEccchHHHHh
Q 012774 147 FATSSVVHKLA 157 (456)
Q Consensus 147 i~~~~~~~~~~ 157 (456)
...+.....+.
T Consensus 254 ~~~P~~~~~l~ 264 (515)
T TIGR03098 254 AAVPPLWAQLA 264 (515)
T ss_pred ecChHHHHHHH
Confidence 99888776654
No 158
>PRK06188 acyl-CoA synthetase; Validated
Probab=59.35 E-value=89 Score=31.42 Aligned_cols=97 Identities=11% Similarity=0.072 Sum_probs=68.9
Q ss_pred CCCcEEEECC---CC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCC
Q 012774 56 DDTVALINSV---TG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV 128 (456)
Q Consensus 56 p~~~A~~~~~---~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~ 128 (456)
++++|++... +| ..+|+..+...+.... .. .++..+|++....+-...+...+++.+..|+..+..+ .
T Consensus 167 ~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~---~~-~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~ 241 (524)
T PRK06188 167 PPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQL---AE-WEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-K 241 (524)
T ss_pred CCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHH---hh-cCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-C
Confidence 4456765432 22 3588888776554333 33 6778899998888766555566778888898888775 4
Q ss_pred CCHHHHHHHhhhcCCeEEEEccchHHHHh
Q 012774 129 NTESEISRQIQLSNPVIAFATSSVVHKLA 157 (456)
Q Consensus 129 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 157 (456)
..+..+...++..++.++...+.....+.
T Consensus 242 ~~~~~~~~~i~~~~~t~~~~~P~~l~~l~ 270 (524)
T PRK06188 242 FDPAEVLRAIEEQRITATFLVPTMIYALL 270 (524)
T ss_pred CCHHHHHHHHHHhCCEEEEehHHHHHHHH
Confidence 56888999999999999998887765543
No 159
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=59.14 E-value=35 Score=32.66 Aligned_cols=63 Identities=14% Similarity=0.026 Sum_probs=47.3
Q ss_pred HHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCC-----CCCHHHHHHHhhhcCCeEEE
Q 012774 80 NSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP-----VNTESEISRQIQLSNPVIAF 147 (456)
Q Consensus 80 ~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~-----~~~~~~l~~~l~~~~~~~vi 147 (456)
..+.-.|+. +++++||-|.+ .+..|+...=+++..|+.+|.+|- +.+++.++..+... .++||
T Consensus 60 ~AL~laL~a-l~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIi 127 (374)
T COG0399 60 AALHLALLA-LAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAII 127 (374)
T ss_pred HHHHHHHHh-cCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEE
Confidence 344445665 68999995554 478899999999999999998774 45788999988774 44554
No 160
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=58.73 E-value=95 Score=31.54 Aligned_cols=99 Identities=14% Similarity=0.174 Sum_probs=72.8
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcC--CCCcHHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLST--NSIEIPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~--~~~~~~~~~la~~~~G~~~v~l~ 126 (456)
++.+|++.. .+| -.+|++.+...+..+...+.. .+++.|++...+| +..-+...+++.+..|...+...
T Consensus 170 ~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~--~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~ 247 (534)
T COG0318 170 PDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGG--GLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLS 247 (534)
T ss_pred CCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcc--cCCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCC
Confidence 677787642 222 469999999987777776653 2788888777766 44566777888899999988877
Q ss_pred C-CCCHHHHHHHhhhcCCeEEEEccchHHHH
Q 012774 127 P-VNTESEISRQIQLSNPVIAFATSSVVHKL 156 (456)
Q Consensus 127 ~-~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 156 (456)
+ ..+++.+...+...++..+...+.+...+
T Consensus 248 ~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~l 278 (534)
T COG0318 248 PEPFDPEEVLWLIEKYKVTVLSGVPTFLREL 278 (534)
T ss_pred CCCcCHHHHHHHHHHhcceEEecchHHHHHH
Confidence 5 68888888888888877777776666554
No 161
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=58.73 E-value=93 Score=30.82 Aligned_cols=97 Identities=15% Similarity=0.102 Sum_probs=66.8
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCc-HHHHHHHHHHhCCeEecCCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANP 127 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~-~~~~~la~~~~G~~~v~l~~ 127 (456)
++++|++.. .+| -.+|++.+...+... ... .++.++|++....+-... .+..+++.+..|+..+..+
T Consensus 140 ~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~---~~~-~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 214 (483)
T PRK03640 140 LDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGS---ALN-LGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE- 214 (483)
T ss_pred CCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHH---HHh-cCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-
Confidence 566776543 222 258888776544332 223 578899999888764222 2234577778899888765
Q ss_pred CCCHHHHHHHhhhcCCeEEEEccchHHHHh
Q 012774 128 VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (456)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 157 (456)
..++..+...+++.++..+...+.....+.
T Consensus 215 ~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~ 244 (483)
T PRK03640 215 KFDAEKINKLLQTGGVTIISVVSTMLQRLL 244 (483)
T ss_pred CCCHHHHHHHHHHhCCcEEEeHHHHHHHHH
Confidence 567899999999999999999888776654
No 162
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=58.12 E-value=71 Score=32.33 Aligned_cols=96 Identities=8% Similarity=0.012 Sum_probs=67.5
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCC--CcHHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~--~~~~~~~la~~~~G~~~v~l~ 126 (456)
++++|++-. .+| -.+|++.+...+...... .++.++|++....+-. ..+...+++.+..|+..+..+
T Consensus 189 ~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~----~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~ 264 (546)
T PRK08314 189 PDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLW----SNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMP 264 (546)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHh----hCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecC
Confidence 567777643 222 358999887766543332 4668899887776543 234456778899999888875
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEccchHHHH
Q 012774 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (456)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 156 (456)
..++..+.+.++..++.++...+.....+
T Consensus 265 -~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 293 (546)
T PRK08314 265 -RWDREAAARLIERYRVTHWTNIPTMVVDF 293 (546)
T ss_pred -CCCHHHHHHHHHHhcCceecccHHHHHHH
Confidence 46778888999999999988877766544
No 163
>PRK07470 acyl-CoA synthetase; Validated
Probab=57.56 E-value=1e+02 Score=31.04 Aligned_cols=100 Identities=12% Similarity=0.100 Sum_probs=63.8
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecC-CC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPA-NP 127 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l-~~ 127 (456)
++.+|++.. .+| -.+|++.+...+......+. .++.++|++..+.+-+..+-...+..+..|...+.+ ..
T Consensus 162 ~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~--~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~ 239 (528)
T PRK07470 162 HDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLM--PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSE 239 (528)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhc--cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEeccc
Confidence 567777643 222 35888888654433222221 256788988888876544333333444556555444 34
Q ss_pred CCCHHHHHHHhhhcCCeEEEEccchHHHHh
Q 012774 128 VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (456)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 157 (456)
..+++.+...++..++.++...+.....+.
T Consensus 240 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 269 (528)
T PRK07470 240 RFDPAEVWALVERHRVTNLFTVPTILKMLV 269 (528)
T ss_pred CcCHHHHHHHHHhcCCeEEechHHHHHHHH
Confidence 567888999999999999999888876664
No 164
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=56.67 E-value=78 Score=32.06 Aligned_cols=86 Identities=14% Similarity=0.029 Sum_probs=59.2
Q ss_pred eecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCc-HHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEE
Q 012774 69 RVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAF 147 (456)
Q Consensus 69 ~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~-~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 147 (456)
.+|...+...+ .+..+....++.++|++..+.+-... .....++.+..|+.++...+...++.+...++..++..+.
T Consensus 195 ~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~ 272 (539)
T PRK07008 195 LYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSA 272 (539)
T ss_pred EEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEE
Confidence 57777765332 22333333678889988877654322 2333467788999888777777889999999999999988
Q ss_pred EccchHHHH
Q 012774 148 ATSSVVHKL 156 (456)
Q Consensus 148 ~~~~~~~~~ 156 (456)
..+.....+
T Consensus 273 ~~P~~~~~l 281 (539)
T PRK07008 273 GVPTVWLGL 281 (539)
T ss_pred echHHHHHH
Confidence 877766554
No 165
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=56.10 E-value=34 Score=32.69 Aligned_cols=63 Identities=14% Similarity=0.091 Sum_probs=43.5
Q ss_pred HHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCC-----CCCHHHHHHHhhhcCCeEEEE
Q 012774 81 SLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP-----VNTESEISRQIQLSNPVIAFA 148 (456)
Q Consensus 81 ~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~-----~~~~~~l~~~l~~~~~~~vi~ 148 (456)
.+-..|.. +|+++||.|.+- ...+....-++..+|+.++.+|. ..+++.+++.+..-. ++|+.
T Consensus 52 Al~~al~~-l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~ 119 (363)
T PF01041_consen 52 ALHLALRA-LGLGPGDEVIVP---AYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILV 119 (363)
T ss_dssp HHHHHHHH-TTGGTTSEEEEE---SSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEE
T ss_pred HHHHHHHh-cCCCcCceEecC---CCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEE
Confidence 34445566 799999988875 56778888899999999998874 357788888877544 44443
No 166
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=54.96 E-value=1e+02 Score=30.81 Aligned_cols=98 Identities=14% Similarity=0.138 Sum_probs=67.6
Q ss_pred CCCcEEEECC---CC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCC--cHHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINSV---TG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~~---~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~--~~~~~~la~~~~G~~~v~l~ 126 (456)
++.+|++... +| -.+|++.+...+.... ....+++++|++....+-.. .+...+++.+..|+..+..+
T Consensus 160 ~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~---~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 236 (508)
T TIGR02262 160 ADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYA---RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMG 236 (508)
T ss_pred CCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHh---HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeC
Confidence 5677765432 22 3588888876554322 23368899998877766443 33345667788898888777
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEccchHHHH
Q 012774 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (456)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 156 (456)
...++..+...++..++.++...+.....+
T Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~ 266 (508)
T TIGR02262 237 ERPTPDAVFDRLRRHQPTIFYGVPTLYAAM 266 (508)
T ss_pred CCCCHHHHHHHHHHHCCcEEecchHHHHHH
Confidence 666788899999999999999888665443
No 167
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=54.07 E-value=1.6e+02 Score=29.87 Aligned_cols=128 Identities=9% Similarity=0.014 Sum_probs=80.7
Q ss_pred eecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcC--CCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEE
Q 012774 69 RVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLST--NSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (456)
Q Consensus 69 ~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~--~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 146 (456)
.+|+... -+.+.++...+|+++.|+|.+.+| ++...++-+-+|+..|+++| |....++...=....+.++.++
T Consensus 261 vith~r~----~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~ 335 (649)
T KOG1179|consen 261 VITHLRY----LQGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVI 335 (649)
T ss_pred HHHHHHH----HHHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeee
Confidence 4666544 445554444479999999999988 78889999999999999977 6678888887788888888887
Q ss_pred EEccchHHHHh---------ccCCeEEEEc---CCchhhhhcccCCCccccccCCCCCCEEEEEcCC
Q 012774 147 FATSSVVHKLA---------KLKHRTILID---SPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSS 201 (456)
Q Consensus 147 i~~~~~~~~~~---------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TS 201 (456)
-.--+...-+. ..+.+...-+ ...|+++...-....-.+.....+-...++.|++
T Consensus 336 QYIGElcRYLl~~p~~~~er~HkVRla~GNGLR~diW~~Fv~RFg~~~IgE~YgaTEgn~~~~N~d~ 402 (649)
T KOG1179|consen 336 QYIGELCRYLLNQPPSPEERQHKVRLAYGNGLRPDIWQQFVKRFGIIKIGEFYGATEGNSNLVNYDG 402 (649)
T ss_pred ehHHHHHHHHHcCCCChhhcCceEEEEecCCCCchHHHHHHHHcCCCeEEEEeccccCcceeeeecC
Confidence 66555544432 1122222222 2346666655332212222233444556666643
No 168
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=53.73 E-value=1.3e+02 Score=31.89 Aligned_cols=95 Identities=16% Similarity=0.122 Sum_probs=64.5
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCC--CCcHHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTN--SIEIPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~--~~~~~~~~la~~~~G~~~v~l~ 126 (456)
++.+|++-. .+| -.+|++.+...+..+.. . .++.++|++...+|- ...+...+++.+..|+..+..+
T Consensus 364 ~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~---~-~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~ 439 (718)
T PRK08043 364 PEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKT---I-ADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYP 439 (718)
T ss_pred CCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---h-hCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeC
Confidence 577776532 222 36999988776655443 2 577899998887764 3445556788888999888765
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEccchHH
Q 012774 127 PVNTESEISRQIQLSNPVIAFATSSVVH 154 (456)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 154 (456)
.......+...+.+.++..+...+....
T Consensus 440 ~~~~~~~~~~~i~~~~vt~~~~~p~~~~ 467 (718)
T PRK08043 440 SPLHYRIVPELVYDRNCTVLFGTSTFLG 467 (718)
T ss_pred CcccHHHHHHHHHhcCCeEEEchHHHHH
Confidence 4445566677788888888776665443
No 169
>PRK07638 acyl-CoA synthetase; Validated
Probab=53.47 E-value=1.3e+02 Score=29.80 Aligned_cols=84 Identities=8% Similarity=0.117 Sum_probs=61.4
Q ss_pred eecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCc-HHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEE
Q 012774 69 RVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAF 147 (456)
Q Consensus 69 ~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~-~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 147 (456)
.+|.+.+...+...+ .. .++.++|++....+-... ++...+..+..|+..+.. +..++..+...++..++.++.
T Consensus 162 ~~s~~~~~~~~~~~~---~~-~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 236 (487)
T PRK07638 162 LRAQQSWLHSFDCNV---HD-FHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMY 236 (487)
T ss_pred EEecHHHHHHHHHHH---Hh-cCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEE
Confidence 588888766554433 33 677899998876654332 345566677889888765 567788899999999999999
Q ss_pred EccchHHHHh
Q 012774 148 ATSSVVHKLA 157 (456)
Q Consensus 148 ~~~~~~~~~~ 157 (456)
..+.....+.
T Consensus 237 ~~P~~~~~l~ 246 (487)
T PRK07638 237 TVPTMLESLY 246 (487)
T ss_pred eCcHHHHHHH
Confidence 9888877665
No 170
>COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain [General function prediction only]
Probab=53.12 E-value=50 Score=28.27 Aligned_cols=55 Identities=20% Similarity=0.276 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEcc
Q 012774 75 FTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (456)
Q Consensus 75 L~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 150 (456)
-.++.+-+++.+.++++++++|++.++... |.-++|+ ++....+.-++++|.++.
T Consensus 85 ~lErieg~~~~~l~~~~i~~~DVliviSnS--------------GrNpvpi-------e~A~~~rekGa~vI~vTS 139 (243)
T COG4821 85 YLERIEGYAKLFLHRLQIRPNDVLIVISNS--------------GRNPVPI-------EVAEYAREKGAKVIAVTS 139 (243)
T ss_pred hhHhhhhHHHHHHHHhcCCCCCEEEEEeCC--------------CCCCcch-------HHHHHHHhcCCeEEEEeh
Confidence 356788888888777999999987777654 6666766 466777788888877654
No 171
>PRK07529 AMP-binding domain protein; Validated
Probab=52.67 E-value=1.2e+02 Score=31.66 Aligned_cols=98 Identities=16% Similarity=0.045 Sum_probs=66.1
Q ss_pred CCCcEEEECC---CC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCC--CcHHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINSV---TG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~~---~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~--~~~~~~~la~~~~G~~~v~l~ 126 (456)
++.+|++... +| -.+|++.+...+..++.. .++.++|++....|-. ......+++.+..|+.++...
T Consensus 212 ~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~----~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~ 287 (632)
T PRK07529 212 PDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALL----LGLGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLAT 287 (632)
T ss_pred cCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHh----cCCCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecC
Confidence 5777776532 22 358898887665544432 4668899888776633 234456788888999888765
Q ss_pred CC-C-C---HHHHHHHhhhcCCeEEEEccchHHHHh
Q 012774 127 PV-N-T---ESEISRQIQLSNPVIAFATSSVVHKLA 157 (456)
Q Consensus 127 ~~-~-~---~~~l~~~l~~~~~~~vi~~~~~~~~~~ 157 (456)
+. . + ...+..++++.++..++..+.....+.
T Consensus 288 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 323 (632)
T PRK07529 288 PQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALL 323 (632)
T ss_pred ccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHH
Confidence 42 1 1 246667889999999998887766554
No 172
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=52.31 E-value=1.2e+02 Score=31.44 Aligned_cols=99 Identities=11% Similarity=0.089 Sum_probs=65.3
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCc--HHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE--IPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~--~~~~~la~~~~G~~~v~l~ 126 (456)
++++|++-. .+| -.+|.+.+.. .++..+....+++++|++....+-+.. +...+++.+..|+..+..+
T Consensus 231 ~~~~a~ilyTSGTTG~PKgV~~sh~~~~~---~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~ 307 (628)
T TIGR02316 231 SNEPSYILYTSGTTGKPKGVQRDVGGYAV---ALALSMWAIFGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYE 307 (628)
T ss_pred CCCcEEEEECCCCCCCCceEEECCcHHHH---HHHHHHHHhcCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeC
Confidence 577776543 222 2467666532 223333333578899988777665433 2455788899999887765
Q ss_pred C---CCCHHHHHHHhhhcCCeEEEEccchHHHHh
Q 012774 127 P---VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (456)
Q Consensus 127 ~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 157 (456)
. ...+..+..++++.++.++.+.+.....+.
T Consensus 308 ~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 341 (628)
T TIGR02316 308 GLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLK 341 (628)
T ss_pred CCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHH
Confidence 2 335778889999999999999887776554
No 173
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=52.22 E-value=1.5e+02 Score=30.02 Aligned_cols=96 Identities=14% Similarity=0.143 Sum_probs=66.9
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCC--cHHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~--~~~~~~la~~~~G~~~v~l~ 126 (456)
++.+|++.. .+| -.+|+..+...+.... .. .+++++|++....+-.. .++..+++.+..|+..+..+
T Consensus 196 ~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~---~~-~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~ 271 (547)
T PRK13295 196 PDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYA---ER-LGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQD 271 (547)
T ss_pred CcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHH---HH-hCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCC
Confidence 567776543 223 3588888776555433 33 67889999888776543 24556778889999887654
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEccchHHHH
Q 012774 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (456)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 156 (456)
..+++.+...++..++..++..+.....+
T Consensus 272 -~~~~~~~~~~l~~~~vt~~~~~p~~~~~l 300 (547)
T PRK13295 272 -IWDPARAAELIRTEGVTFTMASTPFLTDL 300 (547)
T ss_pred -CCCHHHHHHHHHHcCCcEEEecHHHHHHH
Confidence 56788889999999999888776665544
No 174
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=51.57 E-value=68 Score=30.92 Aligned_cols=58 Identities=12% Similarity=-0.011 Sum_probs=39.1
Q ss_pred hHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCC-----CCHHHHHHHhhhcCCeEEEE
Q 012774 86 LQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV-----NTESEISRQIQLSNPVIAFA 148 (456)
Q Consensus 86 L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~ 148 (456)
+.. +++++||.|.+- .+.+.....++...|+.+++++.+ .+.+.++..++. +.++|+.
T Consensus 63 l~a-l~~~pGd~Viv~---~~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip 125 (376)
T TIGR02379 63 ALL-LDIQPGDEVIMP---SYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVP 125 (376)
T ss_pred HHH-cCCCCcCEEEEC---CCCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEE
Confidence 344 578899988764 345666677778889887776643 456777777653 5666654
No 175
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=50.80 E-value=43 Score=26.88 Aligned_cols=41 Identities=5% Similarity=0.046 Sum_probs=32.6
Q ss_pred HHHHHHhHhhcCCCCCCEEEEEcCC---CCcHHHHHHHHHHhCCe
Q 012774 80 NSLASYLQNVTRLSKNDTAFVLSTN---SIEIPILYFSLLSLGVI 121 (456)
Q Consensus 80 ~~~a~~L~~~~gi~~gd~V~l~~~~---~~~~~~~~la~~~~G~~ 121 (456)
+.++..|.+ +|+.+++.|.+++.. +.....+++.+-.+|..
T Consensus 81 ~~~~~~~~~-~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~ 124 (138)
T cd01445 81 AEFAAMFEA-KGIDLDKHLIATDGDDLGGFTACHIALAARLCGHP 124 (138)
T ss_pred HHHHHHHHH-cCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCC
Confidence 467778888 899999999999975 56667777777888854
No 176
>PLN02736 long-chain acyl-CoA synthetase
Probab=50.24 E-value=1.4e+02 Score=31.15 Aligned_cols=100 Identities=11% Similarity=-0.001 Sum_probs=68.6
Q ss_pred cccHHHHHHHHHHhccCC--CCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEe-cCCCHHHHHHHHHHhcceeEEe
Q 012774 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVM-QRFDLKMMLKAVEEFRVTHAAV 287 (456)
Q Consensus 211 ~~th~~l~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~ 287 (456)
.+|.+.+...+..+...+ .+..++|++...++-..-+ ....++++..|+.++.+ +...++.+...+++.+++.++.
T Consensus 78 ~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~ 156 (651)
T PLN02736 78 WMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEW-LIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFC 156 (651)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEE
Confidence 368887765554433322 1678899998877754322 34567788889888766 4678999999999999999999
Q ss_pred cHHHHHHHhcCCCCCCCCCCCceEEEec
Q 012774 288 TPPIVVAMSKGGSTDGYDLSSLETVACG 315 (456)
Q Consensus 288 ~P~~~~~l~~~~~~~~~~l~~lr~v~~g 315 (456)
.+..+..+..... .++.++.++.-
T Consensus 157 ~~~~~~~~~~~~~----~~~~l~~ii~~ 180 (651)
T PLN02736 157 VPQTLNTLLSCLS----EIPSVRLIVVV 180 (651)
T ss_pred CHHHHHHHHHHhh----cCCCceEEEEE
Confidence 9887766654321 23456665543
No 177
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=50.13 E-value=1.2e+02 Score=30.02 Aligned_cols=70 Identities=9% Similarity=-0.095 Sum_probs=45.0
Q ss_pred ceecHHHHHHHHHHH--------------HHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHH-HHHhCCeEecC-------
Q 012774 68 LRVSFSEFTRRTNSL--------------ASYLQNVTRLSKNDTAFVLSTNSIEIPILYFS-LLSLGVIISPA------- 125 (456)
Q Consensus 68 ~~~Ty~eL~~~~~~~--------------a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la-~~~~G~~~v~l------- 125 (456)
..-||.+|.+.+..+ |..|...+++++||.| .+..++...-+ +...|++++-+
T Consensus 76 gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V-----p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~ 150 (460)
T PRK13237 76 GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV-----PGNMYFTTTRYHQELNGGIFVDIIIDEAHD 150 (460)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE-----CCccchHhhHHHHHhCCcEEEeeecccccc
Confidence 344777777776543 3343333789999965 34444555555 78888877733
Q ss_pred -------CCCCCHHHHHHHhhhcC
Q 012774 126 -------NPVNTESEISRQIQLSN 142 (456)
Q Consensus 126 -------~~~~~~~~l~~~l~~~~ 142 (456)
.-+.+.+.++..++...
T Consensus 151 ~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 151 AQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred cccCCCCCCCcCHHHHHHHhcccc
Confidence 34578899999887543
No 178
>PLN02614 long-chain acyl-CoA synthetase
Probab=49.61 E-value=1.1e+02 Score=32.15 Aligned_cols=98 Identities=13% Similarity=0.143 Sum_probs=66.8
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHh-hcCCCCCCEEEEEcCCC--CcHHHHHHHHHHhCCeEecC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQN-VTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPA 125 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~-~~gi~~gd~V~l~~~~~--~~~~~~~la~~~~G~~~v~l 125 (456)
|+.+|++-. .+| -.+|++.+...+..+...+.. ..++.++|++..++|-. .+.. ..+.++..|+..+..
T Consensus 222 ~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~-~~~~~l~~G~~v~~~ 300 (666)
T PLN02614 222 KSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHIFDRV-IEECFIQHGAAIGFW 300 (666)
T ss_pred CCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHHHHHH-HHHHHHHhCCEEEEe
Confidence 677776532 222 469999988776665544421 02577899888887744 3443 345566788887665
Q ss_pred CCCCCHHHHHHHhhhcCCeEEEEccchHHHH
Q 012774 126 NPVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (456)
Q Consensus 126 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 156 (456)
. .++..+...++..++.+++..+.....+
T Consensus 301 ~--~~~~~~~~~i~~~~~T~~~~vP~~~~~l 329 (666)
T PLN02614 301 R--GDVKLLIEDLGELKPTIFCAVPRVLDRV 329 (666)
T ss_pred C--CCHHHHHHHHHHhCCeEEEecHHHHHHH
Confidence 3 3678889999999999999988776654
No 179
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=49.15 E-value=1.6e+02 Score=30.08 Aligned_cols=98 Identities=13% Similarity=0.106 Sum_probs=65.1
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcH-HHHHHHHHHhCCeEecCCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEI-PILYFSLLSLGVIISPANP 127 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~-~~~~la~~~~G~~~v~l~~ 127 (456)
|+.+|++.. .+| -.+|++.+...+..+. .... .++.++|++...+|-...+ ....++.+..|...+...+
T Consensus 180 ~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~-~~~~-~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~ 257 (576)
T PRK05620 180 ETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLR-TTDS-LAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGP 257 (576)
T ss_pred ccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhh-hhhh-cCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCC
Confidence 566666542 222 3588888765443322 1222 5788899988777644322 2344677778888776666
Q ss_pred CCCHHHHHHHhhhcCCeEEEEccchHHH
Q 012774 128 VNTESEISRQIQLSNPVIAFATSSVVHK 155 (456)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 155 (456)
..+++.+...++..++.+++..+.....
T Consensus 258 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 285 (576)
T PRK05620 258 DLSAPTLAKIIATAMPRVAHGVPTLWIQ 285 (576)
T ss_pred CCCHHHHHHHHHHhcCceeeecCHHHHH
Confidence 7788899999999999999887766543
No 180
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=48.78 E-value=87 Score=30.10 Aligned_cols=55 Identities=13% Similarity=0.019 Sum_probs=37.9
Q ss_pred cCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCC-----CCHHHHHHHhhhcCCeEEEE
Q 012774 90 TRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV-----NTESEISRQIQLSNPVIAFA 148 (456)
Q Consensus 90 ~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~ 148 (456)
+++++||.|.+-. +.+.....++...|+.++.++.+ .+.+.+++.+.. +.++|+.
T Consensus 66 ~~~~~Gd~Viv~~---~t~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~ 125 (375)
T PRK11706 66 LDIQPGDEVIMPS---YTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVP 125 (375)
T ss_pred hCCCCCCEEEECC---CCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEE
Confidence 5678999887744 44556666778889987777532 567888887754 5666653
No 181
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=48.65 E-value=1.7e+02 Score=29.44 Aligned_cols=96 Identities=10% Similarity=0.076 Sum_probs=65.8
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcH--HH-HHHHHHHhCCeEecC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEI--PI-LYFSLLSLGVIISPA 125 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~--~~-~~la~~~~G~~~v~l 125 (456)
++++|++-. .+| ..+|...+...+.... .. .++.++|++....|-...+ .. ..++++..|+..+..
T Consensus 182 ~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~---~~-~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~ 257 (527)
T TIGR02275 182 SDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSV---EI-CWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLA 257 (527)
T ss_pred CCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHH---hh-cCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEEC
Confidence 677777542 222 3589988876655433 33 6778899888777654322 22 367788889887664
Q ss_pred CCCCCHHHHHHHhhhcCCeEEEEccchHHHH
Q 012774 126 NPVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (456)
Q Consensus 126 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 156 (456)
+ ...+..+...+++.++.++...+.....+
T Consensus 258 ~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 287 (527)
T TIGR02275 258 P-DPSPTDCFPLIERHKVTVTALVPPAVALW 287 (527)
T ss_pred C-CCCHHHHHHHHHHhCCeEEEecHHHHHHH
Confidence 4 45677788889999999999888776554
No 182
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=48.65 E-value=1.5e+02 Score=31.76 Aligned_cols=118 Identities=14% Similarity=0.084 Sum_probs=74.8
Q ss_pred CCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCCC-----CCCCC-----------cEEEEecchhhHhhHHHHH
Q 012774 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASSP-----KRVSP-----------AVMLFTMPYFHIYGLFFCF 253 (456)
Q Consensus 190 ~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~~-----~~~~~-----------~~~~~~~p~~~~~g~~~~~ 253 (456)
.++.+|++....| .+ -..+|...+...+..+...+. +..++ |++...++-.. --+...+
T Consensus 74 ~p~~~Al~~~~~g---~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~-ew~~~~l 148 (746)
T PTZ00342 74 NNNKIAIVEHSCG---EP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSI-NWLVADL 148 (746)
T ss_pred cCCceeEeccCCC---CC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCH-HHHHHHH
Confidence 4566676533222 11 134677777555444333321 45555 77777776432 1235667
Q ss_pred HHhHhcceEEEe-cCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecC
Q 012774 254 RAAALMETAVVM-QRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGA 316 (456)
Q Consensus 254 ~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG 316 (456)
+++..|+..+.+ +.+.++.+...+++.++.+++..+..+..+.... ..++.++.+++-+
T Consensus 149 A~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~----~~~~~l~~ii~~~ 208 (746)
T PTZ00342 149 ACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERK----NELPHLKKLIILD 208 (746)
T ss_pred HHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhh----ccCCCceEEEEEC
Confidence 788889887766 5689999999999999999999888887776532 1356677666543
No 183
>PRK06164 acyl-CoA synthetase; Validated
Probab=48.40 E-value=1.6e+02 Score=29.72 Aligned_cols=97 Identities=12% Similarity=0.115 Sum_probs=68.7
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCC-CcHHHHHHHHHHhCCeEecCCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS-IEIPILYFSLLSLGVIISPANP 127 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~-~~~~~~~la~~~~G~~~v~l~~ 127 (456)
++.+|++.. .+| -.+|.+.+...+..++.. +++.+++++...+|-+ .-.+..+++.+..|+..+.. +
T Consensus 180 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~----~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~ 254 (540)
T PRK06164 180 PDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARA----YGYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-P 254 (540)
T ss_pred CCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHh----cCCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-C
Confidence 466777652 222 358888887766555444 4667899998887643 22334577888889888765 4
Q ss_pred CCCHHHHHHHhhhcCCeEEEEccchHHHHh
Q 012774 128 VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (456)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 157 (456)
......+...+++.++..++..+.....+.
T Consensus 255 ~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~ 284 (540)
T PRK06164 255 VFDAARTARALRRHRVTHTFGNDEMLRRIL 284 (540)
T ss_pred CCCHHHHHHHHHHhCCeeecCCHHHHHHHH
Confidence 567888999999999999998887766553
No 184
>PRK07787 acyl-CoA synthetase; Validated
Probab=46.92 E-value=1.9e+02 Score=28.61 Aligned_cols=96 Identities=17% Similarity=0.151 Sum_probs=66.3
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCC--CCcHHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTN--SIEIPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~--~~~~~~~~la~~~~G~~~v~l~ 126 (456)
++.+|++-. .+| -.+|+..+...+..++.. +++.++|++....+- ...+...+++.+..|+.++..+
T Consensus 127 ~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~----~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 202 (471)
T PRK07787 127 PDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEA----WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG 202 (471)
T ss_pred CCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHh----cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC
Confidence 567776543 222 258998887766555432 567888987665553 3345667888999999988765
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEccchHHHHh
Q 012774 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (456)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 157 (456)
...++.+...++ .++..+...+.....+.
T Consensus 203 -~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~ 231 (471)
T PRK07787 203 -RPTPEAYAQALS-EGGTLYFGVPTVWSRIA 231 (471)
T ss_pred -CCCHHHHHHHHh-hCceEEEcchHHHHHHH
Confidence 456788888888 88888888777665543
No 185
>PRK06839 acyl-CoA synthetase; Validated
Probab=46.69 E-value=2.8e+02 Score=27.48 Aligned_cols=97 Identities=14% Similarity=0.116 Sum_probs=64.7
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCc--HHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE--IPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~--~~~~~la~~~~G~~~v~l~ 126 (456)
++++|++.. .+| -.+|++.+...+.. .... .++.++|++....|-... +....++.+..|+..+..
T Consensus 148 ~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~---~~~~-~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~- 222 (496)
T PRK06839 148 ESASFIICYTSGTTGKPKGAVLTQENMFWNALN---NTFA-IDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVP- 222 (496)
T ss_pred CCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHH---HHHH-cCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEc-
Confidence 567776643 222 35888887543322 2333 678899998887764432 233446777888876543
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEccchHHHHh
Q 012774 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (456)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 157 (456)
....++.+...++..++.++...+.....+.
T Consensus 223 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 253 (496)
T PRK06839 223 RKFEPTKALSMIEKHKVTVVMGVPTIHQALI 253 (496)
T ss_pred cCCCHHHHHHHHHhhCCeEEEehHHHHHHHH
Confidence 4667888889999999999998887766654
No 186
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=45.73 E-value=38 Score=23.87 Aligned_cols=65 Identities=14% Similarity=0.250 Sum_probs=49.9
Q ss_pred eecHHHHHHHHHHHHH---HhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeE
Q 012774 69 RVSFSEFTRRTNSLAS---YLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVI 145 (456)
Q Consensus 69 ~~Ty~eL~~~~~~~a~---~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 145 (456)
..||.||.+.-+.+++ .|.+ ..++.+|.|+|+-=++... .-++.++...+.+++.+.+++.++++
T Consensus 9 i~t~keL~eE~~~Fv~~kA~l~k-~~L~dDde~aIfnI~gT~S-----------y~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 9 IATYKELDEELKDFVRLKAHLAK-VDLNDDDELAIFNIEGTSS-----------YYVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred heeHHhhhHHHHHHHHHHHHhcc-cccCCCCcEEEEEecCcee-----------EEEEEEeccCCHHHHHHHHHHhCchh
Confidence 5789999888777665 5655 6788899999987665433 24567888889999999999888765
No 187
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=44.95 E-value=1.5e+02 Score=33.29 Aligned_cols=98 Identities=13% Similarity=0.140 Sum_probs=69.2
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCC--CCcHHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTN--SIEIPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~--~~~~~~~~la~~~~G~~~v~l~ 126 (456)
++++|++-. .+| -.+|++.+...+..... . .++.++|++...+|- ...+...+++.+..|+..+...
T Consensus 781 ~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~-~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~ 856 (1146)
T PRK08633 781 PDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISD---V-FNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHP 856 (1146)
T ss_pred CCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHH---h-cCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeC
Confidence 677887643 222 35899988776665443 2 567889988766653 2333444677778898888766
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEccchHHHHh
Q 012774 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (456)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 157 (456)
...+++.+.+.+++.++..+...+.....+.
T Consensus 857 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 887 (1146)
T PRK08633 857 DPTDALGIAKLVAKHRATILLGTPTFLRLYL 887 (1146)
T ss_pred CCCCHHHHHHHHHHcCCeEEEecHHHHHHHH
Confidence 6678889999999999999999887766543
No 188
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=43.92 E-value=2e+02 Score=30.01 Aligned_cols=98 Identities=12% Similarity=0.004 Sum_probs=62.9
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHH-HHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRR-TNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP 127 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~-~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~ 127 (456)
++.+|++-. .+| -.+|.+.+... ....+ .. .+++++|++....+.+......+++.+..|+..+..+.
T Consensus 262 ~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~---~~-~~~~~~d~~~~~~~~~~~~~~~~~~~L~~G~t~vl~~~ 337 (655)
T PRK03584 262 FDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELG---LH-CDLGPGDRFFWYTTCGWMMWNWLVSGLLVGATLVLYDG 337 (655)
T ss_pred CCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHH---Hh-cCCCCCCEEEEcCCchHHhHHHHHHHHHcCCEEEEeCC
Confidence 466776532 222 25777654322 22211 12 57889998876665554333456788899998887653
Q ss_pred ---CCCHHHHHHHhhhcCCeEEEEccchHHHHh
Q 012774 128 ---VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (456)
Q Consensus 128 ---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 157 (456)
..+++.+..++++.++.++.+.+.....+.
T Consensus 338 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 370 (655)
T PRK03584 338 SPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACE 370 (655)
T ss_pred CCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHH
Confidence 246788889999999999888877665553
No 189
>PLN03052 acetate--CoA ligase; Provisional
Probab=42.69 E-value=2.3e+02 Score=30.18 Aligned_cols=99 Identities=10% Similarity=0.028 Sum_probs=67.1
Q ss_pred CCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCC--CCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEe-c
Q 012774 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVM-Q 266 (456)
Q Consensus 190 ~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~-~ 266 (456)
.++.+|++.-..+..+.+ ...+|...+...+......+ .+..++|++...+|..- -.+..+++++..|+..+.+ +
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~-e~via~LA~~~~Gav~vpi~p 265 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNV-HAVIIYLAIILAGCVVVSIAD 265 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCH-HHHHHHHHHHHcCCEEEeeCC
Confidence 356677654432221222 23478888765554433332 16889999999999643 3346677888899987776 5
Q ss_pred CCCHHHHHHHHHHhcceeEEecHH
Q 012774 267 RFDLKMMLKAVEEFRVTHAAVTPP 290 (456)
Q Consensus 267 ~~~~~~~~~~i~~~~~t~~~~~P~ 290 (456)
.+.++.+...+++.++.+++....
T Consensus 266 ~~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 266 SFAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred CCCHHHHHHHHHhcCceEEEEcCc
Confidence 688999999999999999887653
No 190
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=42.67 E-value=2.1e+02 Score=30.26 Aligned_cols=101 Identities=11% Similarity=-0.025 Sum_probs=68.5
Q ss_pred cccHHHHHHHHHHhccCC--CCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEe-cCCCHHHHHHHHHHhcceeEEe
Q 012774 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVM-QRFDLKMMLKAVEEFRVTHAAV 287 (456)
Q Consensus 211 ~~th~~l~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~ 287 (456)
.+|...+...+......+ .+..+++++...++-..- -+...++++..|+..+.+ +...++.+...+++.++.+++.
T Consensus 106 ~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~ 184 (696)
T PLN02387 106 WITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAE-WLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVIC 184 (696)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEE
Confidence 467777765554433322 167888988887774432 235567788889887766 4678999999999999999999
Q ss_pred cHHHHHHHhcCCCCCCCCCCCceEEEecC
Q 012774 288 TPPIVVAMSKGGSTDGYDLSSLETVACGA 316 (456)
Q Consensus 288 ~P~~~~~l~~~~~~~~~~l~~lr~v~~gG 316 (456)
....+..+..... .+++++.++.-+
T Consensus 185 ~~~~~~~l~~~~~----~~~~l~~ii~~~ 209 (696)
T PLN02387 185 DSKQLKKLIDISS----QLETVKRVIYMD 209 (696)
T ss_pred CHHHHHHHHHHhh----ccCCceEEEEEC
Confidence 8888777655321 234566555443
No 191
>PLN02574 4-coumarate--CoA ligase-like
Probab=42.52 E-value=2.4e+02 Score=28.69 Aligned_cols=101 Identities=16% Similarity=0.182 Sum_probs=64.1
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEE-EcCCC--CcHHHHHHHHHHhCCeEecC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFV-LSTNS--IEIPILYFSLLSLGVIISPA 125 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l-~~~~~--~~~~~~~la~~~~G~~~v~l 125 (456)
++.+|++.. .+| -.+|++.+...+..+........+...++.+.+ ..|-. ..+...+++.+..|+..+..
T Consensus 197 ~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~ 276 (560)
T PLN02574 197 QDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVM 276 (560)
T ss_pred cCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEe
Confidence 566776543 222 358999988877766654433233333344443 33321 12223455677789888766
Q ss_pred CCCCCHHHHHHHhhhcCCeEEEEccchHHHHh
Q 012774 126 NPVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (456)
Q Consensus 126 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 157 (456)
+ ..+++.+...+++.++.++...+.....+.
T Consensus 277 ~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 307 (560)
T PLN02574 277 R-RFDASDMVKVIDRFKVTHFPVVPPILMALT 307 (560)
T ss_pred c-CCCHHHHHHHHHHcCCeEEecCCHHHHHHH
Confidence 4 567889999999999999998887776654
No 192
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=41.48 E-value=2.1e+02 Score=32.86 Aligned_cols=97 Identities=15% Similarity=0.167 Sum_probs=68.6
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHH-HHHHHHHhCCeEecCCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI-LYFSLLSLGVIISPANP 127 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~-~~la~~~~G~~~v~l~~ 127 (456)
|+.+|++-. .+| -.+|.+.+...+.... +..++.++|++....+-+.+.-+ -+++.+..|+..+..++
T Consensus 597 ~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~----~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~ 672 (1296)
T PRK10252 597 PHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQ----NHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEP 672 (1296)
T ss_pred CCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHH----HhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECCh
Confidence 677776532 233 3588888876554333 33688999999988877655433 46777888998887664
Q ss_pred --CCCHHHHHHHhhhcCCeEEEEccchHHHH
Q 012774 128 --VNTESEISRQIQLSNPVIAFATSSVVHKL 156 (456)
Q Consensus 128 --~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 156 (456)
..+++.+...++..++.++...+.....+
T Consensus 673 ~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l 703 (1296)
T PRK10252 673 EAHRDPLAMQQFFAEYGVTTTHFVPSMLAAF 703 (1296)
T ss_pred hccCCHHHHHHHHHHcCCeEEEeCHHHHHHH
Confidence 45778899999999999998887765543
No 193
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=41.16 E-value=3.2e+02 Score=26.64 Aligned_cols=116 Identities=18% Similarity=0.186 Sum_probs=57.3
Q ss_pred CCCCCEEEEEcCCCCcHHH----HHH-----HHHHhCCeEecCCC---CCCHHHHHHHhhhcCCeEEEEccchH------
Q 012774 92 LSKNDTAFVLSTNSIEIPI----LYF-----SLLSLGVIISPANP---VNTESEISRQIQLSNPVIAFATSSVV------ 153 (456)
Q Consensus 92 i~~gd~V~l~~~~~~~~~~----~~l-----a~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~vi~~~~~~------ 153 (456)
+++||+|.-+....=..+- .-+ .....-.+..++++ ..+.++++++++..+|++||+..+..
T Consensus 107 l~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y~~~~d~ 186 (399)
T PF00464_consen 107 LKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASSYPRPIDF 186 (399)
T ss_dssp T-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SSTSS---H
T ss_pred HhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchhccCccCH
Confidence 4688888876544321111 111 22222345556764 45779999999999999999975332
Q ss_pred HHHhc---cCCeEEEEcCCchhhhhcccCCCccccccCCCCCCEEEEEcCCCCC--CCCchhcccH
Q 012774 154 HKLAK---LKHRTILIDSPEFDSMTMSWNSKHELDRAKVCQSDVAAIMYSSGTT--GRVKGVMLTH 214 (456)
Q Consensus 154 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtT--G~PK~V~~th 214 (456)
+.+++ ..--.+..|..+..-+...+.-. .+ ....| .+..|..-| |...|++++.
T Consensus 187 ~~~reIad~vga~l~~D~sH~~GLIa~g~~~---~P--~~~AD--vvt~sThKtl~GPrggiI~~~ 245 (399)
T PF00464_consen 187 KRFREIADEVGAYLMADISHIAGLIAGGLFP---NP--FPYAD--VVTGSTHKTLRGPRGGIILTN 245 (399)
T ss_dssp HHHHHHHHHTT-EEEEE-TTTHHHHHTTSS-----G--CCTSS--EEEEESSGGG-SSS-EEEEES
T ss_pred HHHHHHHHhcCcEEEecccccccceehheec---Cc--cccce--EEEeeccccccccCceEEEEc
Confidence 22322 12246667777777777654321 11 11122 333333333 7778888888
No 194
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=40.75 E-value=2.3e+02 Score=28.66 Aligned_cols=96 Identities=10% Similarity=0.057 Sum_probs=66.2
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHH---HHHHHHHHhCCeEecC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIP---ILYFSLLSLGVIISPA 125 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~---~~~la~~~~G~~~v~l 125 (456)
++.+|++-. .+| -.+|.+.+...+..... . .++.++|++...+|-...+- ...++++..|+..+..
T Consensus 181 ~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~---~-~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~ 256 (536)
T PRK10946 181 ADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVE---I-CGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLA 256 (536)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHH---h-cCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEEC
Confidence 567776532 222 35899998886665433 3 57789999888776543322 2468888899988765
Q ss_pred CCCCCHHHHHHHhhhcCCeEEEEccchHHHH
Q 012774 126 NPVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (456)
Q Consensus 126 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 156 (456)
. ...+..+...++..++.++...+.....+
T Consensus 257 ~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l 286 (536)
T PRK10946 257 P-DPSATLCFPLIEKHQVNVTALVPPAVSLW 286 (536)
T ss_pred C-CCCHHHHHHHHHHhCCcEEEeChHHHHHH
Confidence 4 44666777889999999988887766554
No 195
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=40.65 E-value=3e+02 Score=27.28 Aligned_cols=97 Identities=16% Similarity=0.091 Sum_probs=66.0
Q ss_pred CCCcEEEECC---CC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCC-cHHHHHHHHHHhCCeEecCCC
Q 012774 56 DDTVALINSV---TG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI-EIPILYFSLLSLGVIISPANP 127 (456)
Q Consensus 56 p~~~A~~~~~---~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~-~~~~~~la~~~~G~~~v~l~~ 127 (456)
++.+|++-.. +| -.+|++.+...+..+... .++..++++....+-.. ..+..+++++..|+..+..++
T Consensus 140 ~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~----~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~ 215 (502)
T TIGR01734 140 GDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLAD----FPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDK 215 (502)
T ss_pred CCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHh----CCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCH
Confidence 5566665432 22 358998887665543332 57788888877665443 234567788999999988765
Q ss_pred C--CCHHHHHHHhhhcCCeEEEEccchHHHH
Q 012774 128 V--NTESEISRQIQLSNPVIAFATSSVVHKL 156 (456)
Q Consensus 128 ~--~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 156 (456)
. ..+..+...++..++..+...+.....+
T Consensus 216 ~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~ 246 (502)
T TIGR01734 216 DITNNFKLLFEELPKTGLNVWVSTPSFVDMC 246 (502)
T ss_pred HHhcCHHHHHHHHHHcCCeEEEEChhHHHHH
Confidence 3 4567788888999999888887765543
No 196
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=40.57 E-value=1.7e+02 Score=30.62 Aligned_cols=99 Identities=15% Similarity=0.107 Sum_probs=66.6
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHh-hcCCCCCCEEEEEcCCC--CcHHHHHHHHHHhCCeEecC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQN-VTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPA 125 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~-~~gi~~gd~V~l~~~~~--~~~~~~~la~~~~G~~~v~l 125 (456)
|+.+|++-. .+| -.+|.+.+...+..+...+.. ...+.++|++..++|-. .+... .+.++..|+..+..
T Consensus 219 ~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~ 297 (660)
T PLN02861 219 KTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYDQVI-ETYCISKGASIGFW 297 (660)
T ss_pred CCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHHHHHH-HHHHHHhCCEEEEe
Confidence 677776542 222 469999988877666554321 01356789888877743 34443 34467889887665
Q ss_pred CCCCCHHHHHHHhhhcCCeEEEEccchHHHHh
Q 012774 126 NPVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (456)
Q Consensus 126 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 157 (456)
. .++..+...++..++.+++..+.....+.
T Consensus 298 ~--~~~~~~~~~i~~~~~T~~~~vP~~~~~l~ 327 (660)
T PLN02861 298 Q--GDIRYLMEDVQALKPTIFCGVPRVYDRIY 327 (660)
T ss_pred C--CCHHHHHHHHHHhCCcEEeechHHHHHHH
Confidence 3 46788899999999999999887776553
No 197
>PRK13388 acyl-CoA synthetase; Provisional
Probab=39.83 E-value=3.3e+02 Score=27.51 Aligned_cols=95 Identities=11% Similarity=0.073 Sum_probs=62.4
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCC--cHHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~--~~~~~~la~~~~G~~~v~l~ 126 (456)
++.+|++-. .+| -.+|+..+...+..+. .. .+++++|++..+.+-.. .+...+++.+..|+..+..
T Consensus 149 ~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~---~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~- 223 (540)
T PRK13388 149 AMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALT---ER-FGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVALP- 223 (540)
T ss_pred CCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHH---HH-hCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEEC-
Confidence 577777543 222 3588888876554443 33 57789999887766432 2334455677788877643
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEccchHHH
Q 012774 127 PVNTESEISRQIQLSNPVIAFATSSVVHK 155 (456)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 155 (456)
+..++..+...++..++.++...+.....
T Consensus 224 ~~~~~~~~~~~i~~~~vt~~~~~p~~l~~ 252 (540)
T PRK13388 224 AKFSASGFLDDVRRYGATYFNYVGKPLAY 252 (540)
T ss_pred CCCCHHHHHHHHHHhCCeEEEehHHHHHH
Confidence 55678888889999999988765544443
No 198
>PRK09274 peptide synthase; Provisional
Probab=39.78 E-value=2.3e+02 Score=28.69 Aligned_cols=99 Identities=10% Similarity=0.004 Sum_probs=63.4
Q ss_pred CCCCEEEEEcCCCC-CCCCchhcccHHHHHHHHHHhccCC--CCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEec
Q 012774 190 CQSDVAAIMYSSGT-TGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ 266 (456)
Q Consensus 190 ~~~~~a~i~~TSGt-TG~PK~V~~th~~l~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~ 266 (456)
.++.++++....++ ....+...+|...+...+......+ .+..++|++...++-.. ......++++..|+..+.+.
T Consensus 19 ~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~-~~~~~~la~~~~G~~~v~l~ 97 (552)
T PRK09274 19 RPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSL-EFFALTFALFKAGAVPVLVD 97 (552)
T ss_pred CCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcH-HHHHHHHHHHHcCeEEEEcC
Confidence 34555554432221 1222333678888865554433333 16788899988887543 22356778888899877774
Q ss_pred -CCCHHHHHHHHHHhcceeEEecH
Q 012774 267 -RFDLKMMLKAVEEFRVTHAAVTP 289 (456)
Q Consensus 267 -~~~~~~~~~~i~~~~~t~~~~~P 289 (456)
....+.+...+++.++..++..+
T Consensus 98 ~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 98 PGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CCccHHHHHHHHHhcCCCEEEecc
Confidence 56788888999999999887754
No 199
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=39.33 E-value=2.5e+02 Score=25.29 Aligned_cols=78 Identities=10% Similarity=0.141 Sum_probs=46.6
Q ss_pred cHHHHHH-HHHHHHHHhHhhcC-CCCCCEEEEEcCCCCcHHHHHHHHHHh------C--CeEecCCCC---CCHHHHHHH
Q 012774 71 SFSEFTR-RTNSLASYLQNVTR-LSKNDTAFVLSTNSIEIPILYFSLLSL------G--VIISPANPV---NTESEISRQ 137 (456)
Q Consensus 71 Ty~eL~~-~~~~~a~~L~~~~g-i~~gd~V~l~~~~~~~~~~~~la~~~~------G--~~~v~l~~~---~~~~~l~~~ 137 (456)
++..+.+ ..+++.+.+.+ .+ +.+|++|+|.+.=+.+..+++..+... + ..++-++.. ...+.+..+
T Consensus 4 ~~~~~~~~~~~~v~~~i~~-~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~ 82 (258)
T PRK10696 4 EFNKLQKRLRRQVGQAIAD-FNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEY 82 (258)
T ss_pred chhHHHHHHHHHHHHHHHH-cCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHH
Confidence 3444444 34445556766 44 678999999999999998887766442 2 234445442 234445555
Q ss_pred hhhcCCeEEEEc
Q 012774 138 IQLSNPVIAFAT 149 (456)
Q Consensus 138 l~~~~~~~vi~~ 149 (456)
.+..+..+.+.+
T Consensus 83 ~~~lgI~~~v~~ 94 (258)
T PRK10696 83 LESLGVPYHIEE 94 (258)
T ss_pred HHHhCCCEEEEE
Confidence 566665555443
No 200
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=38.87 E-value=2.5e+02 Score=32.58 Aligned_cols=97 Identities=18% Similarity=0.121 Sum_probs=66.3
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCc-HHHHHHHHHHhCCeEecCCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANP 127 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~-~~~~~la~~~~G~~~v~l~~ 127 (456)
|+.+|++-. .+| -.+|.+.+...+..+. +.+++.++|++..+.+-+.+ .+..+++.+..|+.++..+.
T Consensus 414 ~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~----~~~~~~~~d~~~~~~~~~~d~~~~~i~~~L~~G~~l~~~~~ 489 (1389)
T TIGR03443 414 PDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMA----KRFGLSENDKFTMLSGIAHDPIQRDMFTPLFLGAQLLVPTA 489 (1389)
T ss_pred CCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHH----HhcCCCCCCEEEEecCceecchHHHHHHHHhCCCEEEEcCh
Confidence 667776532 233 3689988876654443 33678899998877654432 33456788889998776543
Q ss_pred C--CCHHHHHHHhhhcCCeEEEEccchHHHH
Q 012774 128 V--NTESEISRQIQLSNPVIAFATSSVVHKL 156 (456)
Q Consensus 128 ~--~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 156 (456)
. .++..+...+++.++.++...+.....+
T Consensus 490 ~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l 520 (1389)
T TIGR03443 490 DDIGTPGRLAEWMAKYGATVTHLTPAMGQLL 520 (1389)
T ss_pred hhccCHHHHHHHHHHhCCeEEEeCHHHHHHH
Confidence 2 3567888999999999998887766554
No 201
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=38.74 E-value=2.9e+02 Score=28.43 Aligned_cols=96 Identities=13% Similarity=0.110 Sum_probs=65.8
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCC--cHHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~--~~~~~~la~~~~G~~~v~l~ 126 (456)
++++|++.. .+| -.+|+..+...+..+... .++.++|++....|-.. -+...+++.+..|+..+..
T Consensus 198 ~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~----~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~- 272 (600)
T PRK08279 198 AKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGL----LRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLALR- 272 (600)
T ss_pred ccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHh----cCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEEc-
Confidence 456666543 222 368999888776665443 46789999988776543 3444566677778777654
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEccchHHHH
Q 012774 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (456)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 156 (456)
+..++..+...++..++.++...+.....+
T Consensus 273 ~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l 302 (600)
T PRK08279 273 RKFSASRFWDDVRRYRATAFQYIGELCRYL 302 (600)
T ss_pred CCCCHHHHHHHHHHhcceEEeehHHHHHHH
Confidence 466777888888999999888777665544
No 202
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=38.22 E-value=2.6e+02 Score=31.61 Aligned_cols=97 Identities=19% Similarity=0.103 Sum_probs=67.0
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCC--CcHHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~--~~~~~~~la~~~~G~~~v~l~ 126 (456)
++.+|++-. .+| -.+|.+.+...+...... .++.++|++...+|-. ..+...++..+..|...+..+
T Consensus 792 ~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~----~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~ 867 (1140)
T PRK06814 792 PDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAAR----IDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYP 867 (1140)
T ss_pred CCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHh----hCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEec
Confidence 677776542 222 358999887766655433 5678899988877643 233345667778898887776
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEccchHHHH
Q 012774 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (456)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 156 (456)
.....+.+.+.+++.++..+...+.....+
T Consensus 868 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l 897 (1140)
T PRK06814 868 SPLHYRIIPELIYDTNATILFGTDTFLNGY 897 (1140)
T ss_pred CcccHHHHHHHHHhcCCEEEEecHHHHHHH
Confidence 555666777888899999988877666554
No 203
>PF11142 DUF2917: Protein of unknown function (DUF2917); InterPro: IPR021317 This bacterial family of proteins appears to be restricted to Proteobacteria.
Probab=38.12 E-value=1.2e+02 Score=20.50 Aligned_cols=34 Identities=18% Similarity=0.335 Sum_probs=25.9
Q ss_pred ceEEEecCCcccccCCCccccccccCCCCeeeccceEEEccCCcEEEec
Q 012774 390 GELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYIDEDGFLFIVD 438 (456)
Q Consensus 390 Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~dg~l~~~G 438 (456)
|.+|++-.. -..|-|+..||-..+...+.+++.+
T Consensus 25 G~vWlT~~g---------------~~~D~~L~~G~~l~l~~g~~vvl~a 58 (63)
T PF11142_consen 25 GRVWLTREG---------------DPDDYWLQAGDSLRLRRGGRVVLSA 58 (63)
T ss_pred ccEEEECCC---------------CCCCEEECCCCEEEeCCCCEEEEEe
Confidence 889987432 1147799999999998888888765
No 204
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=38.04 E-value=2.5e+02 Score=29.18 Aligned_cols=97 Identities=12% Similarity=0.159 Sum_probs=67.3
Q ss_pred CCCcEEE-EC--CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHH-HHHHHhCCeEecCCC
Q 012774 56 DDTVALI-NS--VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILY-FSLLSLGVIISPANP 127 (456)
Q Consensus 56 p~~~A~~-~~--~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~-la~~~~G~~~v~l~~ 127 (456)
||.+|.+ +. .+| -.+||+-+...+..+...+. -++++|++.-++|-..-+--++ .++...|.+.+. .
T Consensus 190 ~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~---~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~--~ 264 (613)
T COG1022 190 PDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP---PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVL--F 264 (613)
T ss_pred ccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC---CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEE--e
Confidence 7788754 33 222 46999999999988877765 2689999999988553333322 333333333332 3
Q ss_pred CCCHHHHHHHhhhcCCeEEEEccchHHHHh
Q 012774 128 VNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (456)
Q Consensus 128 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 157 (456)
..+...+...+...+|.+++.-+...+.+.
T Consensus 265 ~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~ 294 (613)
T COG1022 265 KEDPRTLLEDLKEVRPTVMIGVPRVWEKVY 294 (613)
T ss_pred cCCHHHHHHHHHHhCCeEEeechHHHHHHH
Confidence 456778999999999999999988887765
No 205
>PRK07788 acyl-CoA synthetase; Validated
Probab=36.31 E-value=2.2e+02 Score=28.89 Aligned_cols=84 Identities=7% Similarity=-0.047 Sum_probs=60.3
Q ss_pred cccHHHHHHHHHHhccCC--CCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEec-CCCHHHHHHHHHHhcceeEEe
Q 012774 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (456)
Q Consensus 211 ~~th~~l~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 287 (456)
.+|...+...+......+ .+..+++++...++-.- .....+++++..|+..+.++ ....+.+...+++.+++.++.
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 152 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHR-GFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVY 152 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEE
Confidence 477887755544433322 15678889888776432 33466778888999988875 578899999999999999988
Q ss_pred cHHHHHHH
Q 012774 288 TPPIVVAM 295 (456)
Q Consensus 288 ~P~~~~~l 295 (456)
.+.....+
T Consensus 153 ~~~~~~~~ 160 (549)
T PRK07788 153 DDEFTDLL 160 (549)
T ss_pred CchhHHHH
Confidence 87766554
No 206
>PLN02565 cysteine synthase
Probab=35.69 E-value=2.7e+02 Score=26.11 Aligned_cols=91 Identities=10% Similarity=0.015 Sum_probs=59.2
Q ss_pred CcEEEECCCCceecHHHHHHHHHHHHHHhHhhcC-CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHH
Q 012774 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTR-LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISR 136 (456)
Q Consensus 58 ~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~g-i~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~ 136 (456)
++.+.....+-+-||++= -+..+-..+.+ .| +.+|....+....+-.-..+-+++-..|..++.+-|...+.....
T Consensus 31 ~i~~K~E~~nPtGSfKdR--~A~~~l~~~~~-~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~ 107 (322)
T PLN02565 31 RIAAKLEMMEPCSSVKDR--IGYSMITDAEE-KGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRI 107 (322)
T ss_pred eEEEEecccCCccchHHH--HHHHHHHHHHH-cCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHH
Confidence 344444333445566654 22223333333 35 477866556666666666667788889998887777777778888
Q ss_pred HhhhcCCeEEEEccc
Q 012774 137 QIQLSNPVIAFATSS 151 (456)
Q Consensus 137 ~l~~~~~~~vi~~~~ 151 (456)
.++..+++++++++.
T Consensus 108 ~i~~~GA~V~~~~~~ 122 (322)
T PLN02565 108 ILLAFGAELVLTDPA 122 (322)
T ss_pred HHHHcCCEEEEeCCC
Confidence 999999999998753
No 207
>PRK05857 acyl-CoA synthetase; Validated
Probab=35.60 E-value=2.5e+02 Score=28.47 Aligned_cols=95 Identities=17% Similarity=0.064 Sum_probs=64.4
Q ss_pred CCCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCC--CCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEec
Q 012774 189 VCQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ 266 (456)
Q Consensus 189 ~~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~ 266 (456)
..++.++++... | ...+|...+...+......+ .+..+++++...++-.. ..+...++.+..|+..+.++
T Consensus 26 ~~p~~~a~~~~~-~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~-e~~~~~lA~~~~G~v~v~l~ 97 (540)
T PRK05857 26 QQPEAIALRRCD-G------TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGP-ETYLSVLACAKLGAIAVMAD 97 (540)
T ss_pred hCCCcEEEeecC-C------CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCH-HHHHHHHHHHHcCeEEEecC
Confidence 345666654322 2 13578888865555444333 15778899988887543 33466778888999888775
Q ss_pred -CCCHHHHHHHHHHhcceeEEecHHH
Q 012774 267 -RFDLKMMLKAVEEFRVTHAAVTPPI 291 (456)
Q Consensus 267 -~~~~~~~~~~i~~~~~t~~~~~P~~ 291 (456)
....+.+...++..++..++..+..
T Consensus 98 ~~~~~~~l~~~~~~~~~~~ii~~~~~ 123 (540)
T PRK05857 98 GNLPIAAIERFCQITDPAAALVAPGS 123 (540)
T ss_pred ccCCHHHHHHHHHhcCCceEEEeccc
Confidence 5688999999999888888776643
No 208
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=35.47 E-value=4e+02 Score=26.58 Aligned_cols=98 Identities=13% Similarity=0.073 Sum_probs=64.2
Q ss_pred CCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhcc---CCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEec
Q 012774 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFA---SSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ 266 (456)
Q Consensus 190 ~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~ 266 (456)
.++.++++.-.. .+.. -.+|...+...+..+.. .. +..+++++....+-..-. ...+++++..|+.++...
T Consensus 20 ~p~~~a~~~~~~--~~~~--~~~ty~~l~~~v~~la~~L~~~-g~~~~~~v~i~~~n~~~~-~~~~la~~~~G~~~v~l~ 93 (517)
T PRK08008 20 YGHKTALIFESS--GGVV--RRYSYLELNEEINRTANLFYSL-GIRKGDKVALHLDNCPEF-IFCWFGLAKIGAIMVPIN 93 (517)
T ss_pred CCCceEEEcccC--CCcc--ceeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEEcC
Confidence 455666554321 1111 24677776544444333 33 677888888887754432 356678888898877764
Q ss_pred -CCCHHHHHHHHHHhcceeEEecHHHHH
Q 012774 267 -RFDLKMMLKAVEEFRVTHAAVTPPIVV 293 (456)
Q Consensus 267 -~~~~~~~~~~i~~~~~t~~~~~P~~~~ 293 (456)
....+.+...+++.+++.++..+....
T Consensus 94 ~~~~~~~l~~~l~~~~~~~l~~~~~~~~ 121 (517)
T PRK08008 94 ARLLREESAWILQNSQASLLVTSAQFYP 121 (517)
T ss_pred cccCHHHHHHHHHhcCceEEEEecchhH
Confidence 578899999999999999988776543
No 209
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=35.27 E-value=65 Score=27.59 Aligned_cols=33 Identities=21% Similarity=0.286 Sum_probs=28.1
Q ss_pred ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEE
Q 012774 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVL 101 (456)
Q Consensus 68 ~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~ 101 (456)
.-+||.++.+.++++|..+.+ -|.+|.-.|++.
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~-s~~~PDvIiaia 37 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRA-SGFKPDVIVAIA 37 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHH-cCCCCCEEEEEc
Confidence 468999999999999999998 788887666654
No 210
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=35.23 E-value=2.5e+02 Score=28.39 Aligned_cols=85 Identities=12% Similarity=-0.007 Sum_probs=61.8
Q ss_pred cccHHHHHHHHHHhccCC--CCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEec-CCCHHHHHHHHHHhcceeEEe
Q 012774 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (456)
Q Consensus 211 ~~th~~l~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 287 (456)
.+|...+...+......+ .+..+++++....+-...+ +..+++.+..|+..+.+. ....+.+...+++.+++.++.
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~ 124 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVV 124 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEE
Confidence 467777755554443333 1577888888887765433 466788888999888774 578899999999999999998
Q ss_pred cHHHHHHHh
Q 012774 288 TPPIVVAMS 296 (456)
Q Consensus 288 ~P~~~~~l~ 296 (456)
.......+.
T Consensus 125 ~~~~~~~~~ 133 (542)
T PRK06155 125 EAALLAALE 133 (542)
T ss_pred ChhhHHHHH
Confidence 877665543
No 211
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=35.18 E-value=1.6e+02 Score=28.31 Aligned_cols=62 Identities=13% Similarity=0.062 Sum_probs=39.9
Q ss_pred HHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCC-----CCCHHHHHHHhhhcCCeEEE
Q 012774 81 SLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP-----VNTESEISRQIQLSNPVIAF 147 (456)
Q Consensus 81 ~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~-----~~~~~~l~~~l~~~~~~~vi 147 (456)
.+...|.. +++++||.|.+-. +.+.....++...|+.++.++. ..+.+.++..+.. +.++|+
T Consensus 60 al~lal~a-l~~~~Gd~Viv~~---~~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 60 GMHITLMA-LGIGPGDEVITPS---LTWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHH-cCCCCCCEEEECC---CcHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 33444555 6788999877643 3455555667778988877653 2467888887753 456665
No 212
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=35.01 E-value=1.7e+02 Score=30.51 Aligned_cols=78 Identities=17% Similarity=0.121 Sum_probs=58.5
Q ss_pred hcccHHHHHHHHHHhc---cCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEe-cCCCHHHHHHHHHHhcceeE
Q 012774 210 VMLTHRNLTAAVASSF---ASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVM-QRFDLKMMLKAVEEFRVTHA 285 (456)
Q Consensus 210 V~~th~~l~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~ 285 (456)
..+|.+.+...+..+. ... +..++|++...+|..-- .....+++...|+..+.+ +.+.++.+...|++.+++++
T Consensus 91 ~~~Ty~eL~~~v~~lA~~L~~~-Gv~~GDrV~i~~~n~~e-~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~l 168 (647)
T PTZ00237 91 IKLTYYQLYEKVCEFSRVLLNL-NISKNDNVLIYMANTLE-PLIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLI 168 (647)
T ss_pred EEEEHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCHH-HHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEE
Confidence 4578888755444433 333 78899999999997543 245677888889887666 56899999999999999998
Q ss_pred EecH
Q 012774 286 AVTP 289 (456)
Q Consensus 286 ~~~P 289 (456)
+...
T Consensus 169 i~~~ 172 (647)
T PTZ00237 169 ITTN 172 (647)
T ss_pred EEcc
Confidence 8753
No 213
>PF01060 DUF290: Transthyretin-like family; InterPro: IPR001534 This new apparently nematode-specific protein family has been called family 2 []. The proteins show weak similarity to transthyretin (formerly called prealbumin) which transports thyroid hormones. The specific function of this protein is unknown.; GO: 0005615 extracellular space
Probab=34.80 E-value=1.2e+02 Score=21.57 Aligned_cols=15 Identities=13% Similarity=0.430 Sum_probs=12.3
Q ss_pred ccccCCcEEEEEcCC
Q 012774 365 GRLSAGLEAKIVDPE 379 (456)
Q Consensus 365 G~~~~~~~~~i~d~~ 379 (456)
|+|+++++|++.+.+
T Consensus 8 ~~P~~~~~V~L~e~d 22 (80)
T PF01060_consen 8 GKPAKNVKVKLWEDD 22 (80)
T ss_pred CccCCCCEEEEEECC
Confidence 678999999999843
No 214
>PRK05852 acyl-CoA synthetase; Validated
Probab=34.70 E-value=4.8e+02 Score=26.22 Aligned_cols=85 Identities=12% Similarity=0.058 Sum_probs=60.1
Q ss_pred eecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCC--cHHHHHHHHHHhCCeEec-CCCCCCHHHHHHHhhhcCCeE
Q 012774 69 RVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISP-ANPVNTESEISRQIQLSNPVI 145 (456)
Q Consensus 69 ~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~--~~~~~~la~~~~G~~~v~-l~~~~~~~~l~~~l~~~~~~~ 145 (456)
.+|+..+...+..+... ++++++|++....+-.. .+...+++++..|...+. -....++..+...++..++..
T Consensus 195 ~~~~~~~~~~~~~~~~~----~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~ 270 (534)
T PRK05852 195 PWTHANIASSVRAIITG----YRLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATW 270 (534)
T ss_pred EecHHHHHHHHHHHHHH----hCCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcE
Confidence 58988887666655433 46788998887766443 455567777777776543 234566778888899999999
Q ss_pred EEEccchHHHHh
Q 012774 146 AFATSSVVHKLA 157 (456)
Q Consensus 146 vi~~~~~~~~~~ 157 (456)
++..+.....+.
T Consensus 271 ~~~~P~~~~~l~ 282 (534)
T PRK05852 271 YTAVPTIHQILL 282 (534)
T ss_pred EEcChHHHHHHH
Confidence 988887766553
No 215
>PRK06060 acyl-CoA synthetase; Validated
Probab=34.33 E-value=3.3e+02 Score=28.78 Aligned_cols=98 Identities=12% Similarity=0.092 Sum_probs=64.6
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCC--cHHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~--~~~~~~la~~~~G~~~v~l~ 126 (456)
++.+|++-. .+| -.+|++.+...+..+... . +++.++|++....+-.. .+...++..+..|+..+..+
T Consensus 144 ~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~--~-~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~ 220 (705)
T PRK06060 144 GDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRK--A-LRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINS 220 (705)
T ss_pred CCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHH--h-hCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeC
Confidence 567776542 223 358888877665544321 2 56778888776654332 23344567778898887766
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEccchHHHH
Q 012774 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (456)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 156 (456)
....+..+...++..++.++...+.....+
T Consensus 221 ~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l 250 (705)
T PRK06060 221 APVTPEAAAILSARFGPSVLYGVPNFFARV 250 (705)
T ss_pred CCCCHHHHHHHHHhcCCeEEeeHHHHHHHH
Confidence 566777888888999999998887766544
No 216
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=34.25 E-value=61 Score=23.04 Aligned_cols=40 Identities=15% Similarity=0.135 Sum_probs=33.5
Q ss_pred HHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeE
Q 012774 83 ASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVII 122 (456)
Q Consensus 83 a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~ 122 (456)
..+|++..|+++|+.++-+...-.|....+=+++++.-+-
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~ 42 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVE 42 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhcee
Confidence 4678887899999999988888889888888888887543
No 217
>PF07210 DUF1416: Protein of unknown function (DUF1416); InterPro: IPR010814 This family consists of several hypothetical bacterial proteins of around 100 residues in length. Members of this family appear to be Actinomycete specific. The function of this family is unknown.
Probab=33.83 E-value=1.3e+02 Score=21.61 Aligned_cols=19 Identities=21% Similarity=0.524 Sum_probs=14.9
Q ss_pred ccccccCCcEEEEEcCCCCC
Q 012774 363 STGRLSAGLEAKIVDPETGD 382 (456)
Q Consensus 363 ~~G~~~~~~~~~i~d~~~~~ 382 (456)
.-|.|+++..++++| .+|+
T Consensus 16 ~~G~Pv~gAyVRLLD-~sgE 34 (85)
T PF07210_consen 16 RDGEPVGGAYVRLLD-SSGE 34 (85)
T ss_pred cCCcCCCCeEEEEEc-CCCC
Confidence 457899999999999 4443
No 218
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=33.74 E-value=4e+02 Score=26.90 Aligned_cols=91 Identities=9% Similarity=0.057 Sum_probs=60.8
Q ss_pred CCCcEEEECC---CC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCC--cHHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINSV---TG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~~---~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~--~~~~~~la~~~~G~~~v~l~ 126 (456)
++.+|++... +| -.+|++.+...+.. .... .++.++|++....+-.. .++..+++.+..|+..+...
T Consensus 186 ~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~---~~~~-~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~ 261 (547)
T PRK06087 186 GDELAAVLFTSGTEGLPKGVMLTHNNILASERA---YCAR-LNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLD 261 (547)
T ss_pred CCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHH---HHHh-cCCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEecC
Confidence 5667765432 22 24788887655443 2233 67889998887766433 24556777788898888765
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEccc
Q 012774 127 PVNTESEISRQIQLSNPVIAFATSS 151 (456)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~vi~~~~ 151 (456)
..+++.+...++..++..++..+.
T Consensus 262 -~~~~~~~~~~i~~~~~t~~~~~~~ 285 (547)
T PRK06087 262 -IFTPDACLALLEQQRCTCMLGATP 285 (547)
T ss_pred -CCCHHHHHHHHHHcCCCEEeccHH
Confidence 456778888889999988876543
No 219
>PLN03102 acyl-activating enzyme; Provisional
Probab=33.70 E-value=2.1e+02 Score=29.41 Aligned_cols=82 Identities=11% Similarity=-0.038 Sum_probs=58.6
Q ss_pred cccHHHHHHHHHHhccCC--CCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEec-CCCHHHHHHHHHHhcceeEEe
Q 012774 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (456)
Q Consensus 211 ~~th~~l~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 287 (456)
.+|...+...+......+ .+..++|++...+|-.- .-...+++.+..|+.++.+. ..+.+.+...++..+++.++.
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~-e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~ 117 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTP-AMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFV 117 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH-HHHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEE
Confidence 477787765554433333 16788999988888543 22356778888888877764 578999999999999999988
Q ss_pred cHHHHH
Q 012774 288 TPPIVV 293 (456)
Q Consensus 288 ~P~~~~ 293 (456)
.+....
T Consensus 118 ~~~~~~ 123 (579)
T PLN03102 118 DRSFEP 123 (579)
T ss_pred ChhhHH
Confidence 765443
No 220
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=33.61 E-value=58 Score=25.19 Aligned_cols=56 Identities=18% Similarity=0.135 Sum_probs=43.0
Q ss_pred ecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHH--HHHHHh-CCeEecC
Q 012774 70 VSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILY--FSLLSL-GVIISPA 125 (456)
Q Consensus 70 ~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~--la~~~~-G~~~v~l 125 (456)
=|-.++.+.+..+-..+.++.++.+.|.|-++..-..++-..+ .|+-+. |...||+
T Consensus 13 nt~e~I~~at~eLl~~ii~~N~l~~edivSv~FT~T~DL~a~FPA~aaR~~~Gw~~Vpl 71 (117)
T TIGR01796 13 NEAEEIGEAVAELLTELMERNELTPEDLISVIFTVTEDLHADFPAAAARGLPGWTDVPV 71 (117)
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEecCcccccChHHHHHhccCCCCcce
Confidence 4578999999999888888799999999998887666655544 555555 7777765
No 221
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=33.32 E-value=3.4e+02 Score=28.19 Aligned_cols=96 Identities=13% Similarity=0.035 Sum_probs=65.1
Q ss_pred CCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCC--CCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEec-
Q 012774 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ- 266 (456)
Q Consensus 190 ~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 266 (456)
.++.+|++.... .. .....+|.+.+...+......+ .+..++|++...++-.- -....+++++..|+..+.+.
T Consensus 80 ~p~~~Al~~~~~-~~--~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~v~l~~ 155 (637)
T PRK00174 80 RGDKVAIIWEGD-DP--GDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIP-EAAVAMLACARIGAVHSVVFG 155 (637)
T ss_pred CCCCeEEEEECC-CC--CceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCCEEEecCC
Confidence 456677654221 10 1234578888866555443333 26788999998887543 22456778888999877764
Q ss_pred CCCHHHHHHHHHHhcceeEEecH
Q 012774 267 RFDLKMMLKAVEEFRVTHAAVTP 289 (456)
Q Consensus 267 ~~~~~~~~~~i~~~~~t~~~~~P 289 (456)
.+..+.+...+++.++..++...
T Consensus 156 ~~~~~~l~~~l~~~~~~~li~~~ 178 (637)
T PRK00174 156 GFSAEALADRIIDAGAKLVITAD 178 (637)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcC
Confidence 67889999999999999988754
No 222
>PLN02654 acetate-CoA ligase
Probab=32.91 E-value=1.9e+02 Score=30.29 Aligned_cols=80 Identities=10% Similarity=0.037 Sum_probs=59.0
Q ss_pred hcccHHHHHHHHHHhccCC--CCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEe-cCCCHHHHHHHHHHhcceeEE
Q 012774 210 VMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVM-QRFDLKMMLKAVEEFRVTHAA 286 (456)
Q Consensus 210 V~~th~~l~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 286 (456)
..+|...+...+..+...+ .+..++|++...+|... -....+++++..|+..+.+ +.+..+.+...++..++.+++
T Consensus 119 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~-e~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li 197 (666)
T PLN02654 119 ASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLM-ELPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVI 197 (666)
T ss_pred EEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEE
Confidence 3578888865554433333 16789999999988653 2246677888899987766 568899999999999999998
Q ss_pred ecHH
Q 012774 287 VTPP 290 (456)
Q Consensus 287 ~~P~ 290 (456)
+...
T Consensus 198 ~~~~ 201 (666)
T PLN02654 198 TCNA 201 (666)
T ss_pred EcCc
Confidence 7644
No 223
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=32.72 E-value=1.3e+02 Score=25.50 Aligned_cols=47 Identities=9% Similarity=-0.098 Sum_probs=33.4
Q ss_pred CceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHH
Q 012774 67 GLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSL 115 (456)
Q Consensus 67 ~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~ 115 (456)
+.-+||.|+.+.+.++|..|.+.++. .+.+.+...++-..++..+|-
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~~~~--~~~viV~i~~gg~~~A~~La~ 60 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITADLAD--ENPLVLCVMGGGLVFTGQLLP 60 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHHcCC--CCeEEEEECCCcHHHHHHHHH
Confidence 55789999999999999999984332 233555566666666666654
No 224
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=32.50 E-value=3.4e+02 Score=23.68 Aligned_cols=91 Identities=12% Similarity=0.139 Sum_probs=0.0
Q ss_pred CCCcEEEEecc-hhhHhhH-HHHHHHhHhcceEEEec-CCCHHHHHHHHHHhcceeEEecHH------HHHHHhcCCCCC
Q 012774 232 VSPAVMLFTMP-YFHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPP------IVVAMSKGGSTD 302 (456)
Q Consensus 232 ~~~~~~~~~~p-~~~~~g~-~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~------~~~~l~~~~~~~ 302 (456)
....+++.+.+ =.|..|. ......-..|-.++... +..++.+.+.+.+.+++++.++-. .+..+.+..+..
T Consensus 87 ~~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~ 166 (213)
T cd02069 87 SKGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRR 166 (213)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhc
Q ss_pred CCCCCCceEEEecCCCCCHHHHHH
Q 012774 303 GYDLSSLETVACGAAPLGKDTIMA 326 (456)
Q Consensus 303 ~~~l~~lr~v~~gG~~~~~~~~~~ 326 (456)
..+.+ +++||.+++++..+.
T Consensus 167 ~~~~~----i~vGG~~~~~~~~~~ 186 (213)
T cd02069 167 GIKIP----LLIGGAATSRKHTAV 186 (213)
T ss_pred CCCCe----EEEEChhcCHHHHhh
No 225
>KOG1138 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification]
Probab=32.34 E-value=71 Score=31.48 Aligned_cols=67 Identities=13% Similarity=0.212 Sum_probs=50.4
Q ss_pred cCCCCCCEEEEEcC-CCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHH
Q 012774 90 TRLSKNDTAFVLST-NSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (456)
Q Consensus 90 ~gi~~gd~V~l~~~-~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 156 (456)
.|..+...|...-| -+...+.+=|-=+...+++.|++..+.-..+..+++..+|+++++.+......
T Consensus 413 ~g~sp~NsvI~tdpD~~~~~vl~PfrpLamK~i~cpidtrlnfqql~kLlkelqPk~vlcpeaytqp~ 480 (653)
T KOG1138|consen 413 WGLSPKNSVIFTDPDFSYLLVLAPFRPLAMKIIYCPIDTRLNFQQLPKLLKELQPKIVLCPEAYTQPI 480 (653)
T ss_pred hcCCCCCceEEeCCCCchhhhhcCCccccceeEeccccccccHHHHHHHHHHhCCCEEEChhhhcCCC
Confidence 56666665655554 44555555566667788899999999999999999999999999987665443
No 226
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=32.31 E-value=63 Score=29.63 Aligned_cols=52 Identities=17% Similarity=0.305 Sum_probs=41.8
Q ss_pred eecHHHHHHH-----HHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 012774 69 RVSFSEFTRR-----TNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVI 121 (456)
Q Consensus 69 ~~Ty~eL~~~-----~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~ 121 (456)
.+.|.++.+. ...+...|.+ .|+.+++.|.++|.++.....+++++-.+|..
T Consensus 201 ~i~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 201 NVPWTELVREGELKTTDELDAIFFG-RGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCHHHhcCCCCcCCHHHHHHHHHh-cCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 4677777632 4566666776 89999999999999999999999999888875
No 227
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=32.31 E-value=2.3e+02 Score=22.70 Aligned_cols=92 Identities=9% Similarity=-0.001 Sum_probs=53.4
Q ss_pred hhHhhHHHH-HHHhHhcceEEEec-CCCHHHHHHHHHHhcceeEEecHH------HHHHHhcCCCCCCCCCCCceEEEec
Q 012774 244 FHIYGLFFC-FRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPP------IVVAMSKGGSTDGYDLSSLETVACG 315 (456)
Q Consensus 244 ~~~~g~~~~-~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~------~~~~l~~~~~~~~~~l~~lr~v~~g 315 (456)
.|..|...+ ...-..|-.++... ...++.+.+.+.+++++++..+-. .+..+.+..+.. .++.+ .+++|
T Consensus 15 ~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~--~~~~~-~i~vG 91 (137)
T PRK02261 15 CHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEA--GLGDI-LLYVG 91 (137)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhc--CCCCC-eEEEE
Confidence 577777433 33334666666665 567899999999999999866532 233333332222 23344 46666
Q ss_pred CCCC-----CHHHHHHHHHhCCCCceEeccCc
Q 012774 316 AAPL-----GKDTIMAFASKFPKVVLVQAYGL 342 (456)
Q Consensus 316 G~~~-----~~~~~~~~~~~~~~~~i~~~yG~ 342 (456)
|... +++..+++++. | +-..|+.
T Consensus 92 G~~~~~~~~~~~~~~~l~~~--G--~~~vf~~ 119 (137)
T PRK02261 92 GNLVVGKHDFEEVEKKFKEM--G--FDRVFPP 119 (137)
T ss_pred CCCCCCccChHHHHHHHHHc--C--CCEEECc
Confidence 6553 34555666665 4 3345553
No 228
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=32.20 E-value=2.3e+02 Score=24.85 Aligned_cols=83 Identities=12% Similarity=0.127 Sum_probs=49.1
Q ss_pred hhhHhhHHHHHHHhHh-cceEEEe-cCCCHHHHHHHHHHhcceeEEecHHHHHHH------hcCCCCCCCCCCCceEEEe
Q 012774 243 YFHIYGLFFCFRAAAL-METAVVM-QRFDLKMMLKAVEEFRVTHAAVTPPIVVAM------SKGGSTDGYDLSSLETVAC 314 (456)
Q Consensus 243 ~~~~~g~~~~~~~l~~-G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l------~~~~~~~~~~l~~lr~v~~ 314 (456)
-.|..|...+-..+-. |--++-+ .+..++.+.+..++++++.+.++..+-..+ .+..+..+ +..--.+.+
T Consensus 115 DvHdIGk~iV~~ml~~aGfevidLG~dvP~e~fve~a~e~k~d~v~~SalMTttm~~~~~viE~L~eeG--iRd~v~v~v 192 (227)
T COG5012 115 DVHDIGKNIVATMLEAAGFEVIDLGRDVPVEEFVEKAKELKPDLVSMSALMTTTMIGMKDVIELLKEEG--IRDKVIVMV 192 (227)
T ss_pred cHHHHHHHHHHHHHHhCCcEEEecCCCCCHHHHHHHHHHcCCcEEechHHHHHHHHHHHHHHHHHHHcC--CccCeEEee
Confidence 3577777544444433 3333333 356789999999999999987765532222 22211111 222235667
Q ss_pred cCCCCCHHHHHHH
Q 012774 315 GAAPLGKDTIMAF 327 (456)
Q Consensus 315 gG~~~~~~~~~~~ 327 (456)
||+|++++..+++
T Consensus 193 GGApvtq~~a~~i 205 (227)
T COG5012 193 GGAPVTQDWADKI 205 (227)
T ss_pred cCccccHHHHHHh
Confidence 9999997766554
No 229
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=31.57 E-value=2e+02 Score=28.36 Aligned_cols=56 Identities=9% Similarity=0.105 Sum_probs=37.6
Q ss_pred cCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCC-----CCHHHHHHHhhhcCCeEEEEc
Q 012774 90 TRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV-----NTESEISRQIQLSNPVIAFAT 149 (456)
Q Consensus 90 ~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 149 (456)
.++++||.|.+-. +.+.....++...|+.+++++.+ .+.+.++..+.. +.++|++.
T Consensus 106 ~~~~pGd~VIv~~---~t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 106 RALKPGDEVITVA---AGFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred cCCCCCCEEEECC---CCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 3789999887653 44566667777889987776542 467778777753 45666553
No 230
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=31.24 E-value=1.1e+02 Score=22.60 Aligned_cols=52 Identities=12% Similarity=0.076 Sum_probs=36.0
Q ss_pred eecHHHHHHH----HHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 012774 69 RVSFSEFTRR----TNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVI 121 (456)
Q Consensus 69 ~~Ty~eL~~~----~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~ 121 (456)
.+.+.++.+. .+.+...+.. .++.+++.|.++|.++.....+...+...|..
T Consensus 37 ~ip~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 37 NIPLSSLPDALALSEEEFEKKYGF-PKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EechHHhhhhhCCCHHHHHHHhcc-cCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 3556665433 2345666665 67778899999999887777777777778863
No 231
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=31.02 E-value=3.2e+02 Score=26.90 Aligned_cols=56 Identities=9% Similarity=0.078 Sum_probs=29.9
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCH----HHHHHHhhhcCCeEEEEcc
Q 012774 94 KNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTE----SEISRQIQLSNPVIAFATS 150 (456)
Q Consensus 94 ~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~----~~l~~~l~~~~~~~vi~~~ 150 (456)
.|.+|+|..+.+..+-++-+-. ..|..++.+...... +.++..+.......++++.
T Consensus 299 ~gkrv~v~g~~~~~~~l~~~L~-elG~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~v~~~ 358 (429)
T cd03466 299 FGRKAAIYGEPDFVVAITRFVL-ENGMVPVLIATGSESKKLKEKLEEDLKEYVEKCVILDG 358 (429)
T ss_pred CCCEEEEEcCHHHHHHHHHHHH-HCCCEEEEEEeCCCChHHHHHHHHHHHhcCCceEEEeC
Confidence 5778888886543333333333 578776554433332 2344445555566666553
No 232
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=31.01 E-value=3e+02 Score=22.65 Aligned_cols=83 Identities=16% Similarity=0.130 Sum_probs=56.7
Q ss_pred hcceEEEecCCCHHHHHHHHHHh-cceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCC-------CCHHHHHHHHH
Q 012774 258 LMETAVVMQRFDLKMMLKAVEEF-RVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAP-------LGKDTIMAFAS 329 (456)
Q Consensus 258 ~G~~~~~~~~~~~~~~~~~i~~~-~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~-------~~~~~~~~~~~ 329 (456)
-|.++.+-.......+.+.|.+. ++|++.-....+..|.+. +..+.++.||+. ..+...+.+++
T Consensus 19 ~~~~Ifld~GtT~~~la~~L~~~~~ltVvTnsl~ia~~l~~~--------~~~~vi~~GG~~~~~~~~~~G~~a~~~l~~ 90 (161)
T PF00455_consen 19 DGDTIFLDSGTTTLELAKYLPDKKNLTVVTNSLPIANELSEN--------PNIEVILLGGEVNPKSLSFVGPIALEALRQ 90 (161)
T ss_pred CCCEEEEECchHHHHHHHHhhcCCceEEEECCHHHHHHHHhc--------CceEEEEeCCEEEcCCCcEECchHHHHHHh
Confidence 45555555566677888888877 888888888888888664 368889999843 33455566666
Q ss_pred hCCCCceEeccCccccccc
Q 012774 330 KFPKVVLVQAYGLTESTAG 348 (456)
Q Consensus 330 ~~~~~~i~~~yG~tE~~~~ 348 (456)
...+..++..-|..+-.++
T Consensus 91 ~~~d~afi~~~gi~~~~G~ 109 (161)
T PF00455_consen 91 FRFDKAFIGADGISEEGGL 109 (161)
T ss_pred hccceEEecccEecCCCcc
Confidence 5556677777777764333
No 233
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=30.88 E-value=38 Score=21.19 Aligned_cols=22 Identities=23% Similarity=0.265 Sum_probs=19.7
Q ss_pred eEEEecCCCCCHHHHHHHHHhC
Q 012774 310 ETVACGAAPLGKDTIMAFASKF 331 (456)
Q Consensus 310 r~v~~gG~~~~~~~~~~~~~~~ 331 (456)
+.+-++|.|++.++-+.++..|
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~ 43 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIF 43 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHH
Confidence 6788999999999999988877
No 234
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=30.88 E-value=93 Score=23.74 Aligned_cols=40 Identities=15% Similarity=0.285 Sum_probs=30.6
Q ss_pred HHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCC
Q 012774 80 NSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGV 120 (456)
Q Consensus 80 ~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~ 120 (456)
..+...+.. .++.+++.|.++|..+.....+...+..+|.
T Consensus 64 ~~~~~~~~~-~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~ 103 (118)
T cd01449 64 EELRALFAA-LGITPDKPVIVYCGSGVTACVLLLALELLGY 103 (118)
T ss_pred HHHHHHHHH-cCCCCCCCEEEECCcHHHHHHHHHHHHHcCC
Confidence 345556666 7888899999999888777777777777786
No 235
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=30.86 E-value=1.5e+02 Score=27.20 Aligned_cols=64 Identities=14% Similarity=0.093 Sum_probs=49.5
Q ss_pred CCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEec-CCCCCCHHHHHHHhhhcCCeEEEEccchHH
Q 012774 91 RLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISP-ANPVNTESEISRQIQLSNPVIAFATSSVVH 154 (456)
Q Consensus 91 gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~-l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 154 (456)
.+.+||.|.--..||.---+.+--|-..|+--+- +...-..+++...|+..++..||++++..+
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~ 221 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD 221 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc
Confidence 5688999988888886666666666666874444 455667899999999999999999987764
No 236
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=30.64 E-value=2.4e+02 Score=27.00 Aligned_cols=63 Identities=10% Similarity=0.044 Sum_probs=40.4
Q ss_pred HHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCC-----CCCHHHHHHHhhh---cCCeEEE
Q 012774 81 SLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP-----VNTESEISRQIQL---SNPVIAF 147 (456)
Q Consensus 81 ~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~-----~~~~~~l~~~l~~---~~~~~vi 147 (456)
.+...+.. +++++||.|.+-.+ .+....-++...|+.++.++. ..+.+.++..++. -+.++|+
T Consensus 56 al~~~l~a-l~~~~Gd~Viv~~~---~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~ 126 (380)
T TIGR03588 56 ALHIACLA-LGVGPGDRVWTTPI---TFVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIV 126 (380)
T ss_pred HHHHHHHH-cCCCCCCEEEeCCc---chHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEE
Confidence 34444454 57789998776543 345555667788987766543 2467888888863 3556665
No 237
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=30.48 E-value=4.7e+02 Score=26.31 Aligned_cols=96 Identities=14% Similarity=0.118 Sum_probs=64.9
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCC--cHHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~--~~~~~~la~~~~G~~~v~l~ 126 (456)
++.+|++-. .+| -.+|++.+...+..... . .+++.+|++....+-.. .++..++..+..|...+..
T Consensus 194 ~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~---~-~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~- 268 (538)
T TIGR03208 194 PDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAE---R-LELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVLQ- 268 (538)
T ss_pred CCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHh---h-cCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEec-
Confidence 677776532 222 35788877665544332 3 56788998888877543 2445567777788876644
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEccchHHHH
Q 012774 127 PVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (456)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 156 (456)
+..++..+...+++.++.++...+.....+
T Consensus 269 ~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l 298 (538)
T TIGR03208 269 DIWNPARAAELIRETGVTFTMASTPFLTDL 298 (538)
T ss_pred CccCHHHHHHHHHHhCCeEEecCHHHHHHH
Confidence 466788889999999999988776665543
No 238
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=29.81 E-value=2.3e+02 Score=28.19 Aligned_cols=59 Identities=15% Similarity=0.184 Sum_probs=38.0
Q ss_pred CCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCC-CCCCHHHHHHHhhhcCCeEEEEccch
Q 012774 93 SKNDTAFVLSTNSIEIPILYFSLLSLGVIISPAN-PVNTESEISRQIQLSNPVIAFATSSV 152 (456)
Q Consensus 93 ~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~-~~~~~~~l~~~l~~~~~~~vi~~~~~ 152 (456)
.+||+|++=-| ++......+-...+-.+.+|++ ....++.+++.++..+++++++.+.+
T Consensus 177 ~pGd~v~vE~P-tY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~ 236 (459)
T COG1167 177 DPGDTVLVEDP-TYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTF 236 (459)
T ss_pred CCCCEEEEcCC-CcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCC
Confidence 47887775432 3444444444444444444554 35688999999999999999987654
No 239
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=29.68 E-value=2.4e+02 Score=29.56 Aligned_cols=78 Identities=13% Similarity=0.008 Sum_probs=57.3
Q ss_pred cccHHHHHHHHHHhccCC--CCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEe-cCCCHHHHHHHHHHhcceeEEe
Q 012774 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVM-QRFDLKMMLKAVEEFRVTHAAV 287 (456)
Q Consensus 211 ~~th~~l~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~ 287 (456)
.+|...+...+..+...+ .+..++|++...+|..- -.....++++..|+..+.. +.+..+.+...+++.++..++.
T Consensus 114 ~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~-e~~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~ 192 (652)
T TIGR01217 114 PVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIP-QAVVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFT 192 (652)
T ss_pred EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEE
Confidence 578887765554433333 26889999999998753 3346677888889887766 4678899999999999998876
Q ss_pred cH
Q 012774 288 TP 289 (456)
Q Consensus 288 ~P 289 (456)
..
T Consensus 193 ~~ 194 (652)
T TIGR01217 193 VD 194 (652)
T ss_pred cc
Confidence 54
No 240
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=29.64 E-value=4.2e+02 Score=27.40 Aligned_cols=99 Identities=15% Similarity=0.024 Sum_probs=60.5
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCC--CcHHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS--IEIPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~--~~~~~~~la~~~~G~~~v~l~ 126 (456)
++.+|++-. .+| -.+|++.+...+..+...+.. .+ ..++++...+|-. ..+...++.++..|+.++..+
T Consensus 208 ~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~-~~-~~~~~~l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~ 285 (614)
T PRK08180 208 PDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPF-LA-EEPPVLVDWLPWNHTFGGNHNLGIVLYNGGTLYIDD 285 (614)
T ss_pred cCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccc-cC-CCCcEEEEecchHHHhhHHHHHHHHHhcCCEEEEeC
Confidence 677776543 222 358999988777665544422 11 2456666666532 334455667788898887755
Q ss_pred CCCCH---HHHHHHhhhcCCeEEEEccchHHHH
Q 012774 127 PVNTE---SEISRQIQLSNPVIAFATSSVVHKL 156 (456)
Q Consensus 127 ~~~~~---~~l~~~l~~~~~~~vi~~~~~~~~~ 156 (456)
....+ .++...++..++..++..+.....+
T Consensus 286 ~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l 318 (614)
T PRK08180 286 GKPTPGGFDETLRNLREISPTVYFNVPKGWEML 318 (614)
T ss_pred CCccchhHHHHHHHHHHhCCcEEechHHHHHHH
Confidence 33333 3556667888898888777655443
No 241
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=29.55 E-value=3.6e+02 Score=23.12 Aligned_cols=109 Identities=13% Similarity=0.095 Sum_probs=0.0
Q ss_pred HHHHHHHHHhccCCCCCCCCcEEEEecc-hhhHhhH-HHHHHHhHhcceEEEec-CCCHHHHHHHHHHhcceeEEecH--
Q 012774 215 RNLTAAVASSFASSPKRVSPAVMLFTMP-YFHIYGL-FFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTP-- 289 (456)
Q Consensus 215 ~~l~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~g~-~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P-- 289 (456)
+..+..+..............+++.+.+ =.|..|. ......-..|-.++... ...++.+.+.+.+.+++++.++-
T Consensus 64 ~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~ 143 (201)
T cd02070 64 KAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALM 143 (201)
T ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc
Q ss_pred ----HHHHHHhcCCCCCCC--CCCCceEEEecCCCCCHHHHHHH
Q 012774 290 ----PIVVAMSKGGSTDGY--DLSSLETVACGAAPLGKDTIMAF 327 (456)
Q Consensus 290 ----~~~~~l~~~~~~~~~--~l~~lr~v~~gG~~~~~~~~~~~ 327 (456)
..+..+.+..+.... +.+ +++||.+++++..+.+
T Consensus 144 ~~~~~~~~~~i~~lr~~~~~~~~~----i~vGG~~~~~~~~~~~ 183 (201)
T cd02070 144 TTTMGGMKEVIEALKEAGLRDKVK----VMVGGAPVNQEFADEI 183 (201)
T ss_pred cccHHHHHHHHHHHHHCCCCcCCe----EEEECCcCCHHHHHHc
No 242
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=29.27 E-value=5.6e+02 Score=25.50 Aligned_cols=66 Identities=12% Similarity=0.026 Sum_probs=47.0
Q ss_pred cCCCCCCEEEEEcCCCCc-HHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHH
Q 012774 90 TRLSKNDTAFVLSTNSIE-IPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (456)
Q Consensus 90 ~gi~~gd~V~l~~~~~~~-~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 156 (456)
+++.+++++....+-... .....+..+..|+..+.. +..+++.+...+++.++.+++..+.....+
T Consensus 191 ~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l 257 (509)
T PRK12406 191 YGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQ-PRFDPEELLQLIERHRITHMHMVPTMFIRL 257 (509)
T ss_pred cCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEc-cCCCHHHHHHHHHHcCCeEEEccHHHHHHH
Confidence 678999988877654322 223334456678776655 457889999999999999999888776554
No 243
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=28.83 E-value=3.7e+02 Score=23.02 Aligned_cols=116 Identities=9% Similarity=0.036 Sum_probs=0.0
Q ss_pred hcccHHHHHHHHHHhccCCC---CCCCCcEEEEecch--hhHhhH-HHHHHHhHhcceEEEe-cCCCHHHHHHHHHHhcc
Q 012774 210 VMLTHRNLTAAVASSFASSP---KRVSPAVMLFTMPY--FHIYGL-FFCFRAAALMETAVVM-QRFDLKMMLKAVEEFRV 282 (456)
Q Consensus 210 V~~th~~l~~~~~~~~~~~~---~~~~~~~~~~~~p~--~~~~g~-~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~ 282 (456)
+.+....+...+......++ ......+++...+. .|..|. ......-..|-.++.. ....++.+.+.+++.++
T Consensus 57 ~~~a~~~~~~~l~~l~~~~~~~~~~~~~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~p 136 (197)
T TIGR02370 57 VMMSADAMLAGIKVLTPEMEKAVETEVLGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKP 136 (197)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccCCCCCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCC
Q ss_pred eeEEecH------HHHHHHhcCCCCCCCCCCCceEEEecCCCCCHHHHHHH
Q 012774 283 THAAVTP------PIVVAMSKGGSTDGYDLSSLETVACGAAPLGKDTIMAF 327 (456)
Q Consensus 283 t~~~~~P------~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~ 327 (456)
+++.++- ..+..+.+..+.. .+..--.+++||.+++++..+.+
T Consensus 137 d~v~lS~~~~~~~~~~~~~i~~l~~~--~~~~~v~i~vGG~~~~~~~~~~~ 185 (197)
T TIGR02370 137 LMLTGSALMTTTMYGQKDINDKLKEE--GYRDSVKFMVGGAPVTQDWADKI 185 (197)
T ss_pred CEEEEccccccCHHHHHHHHHHHHHc--CCCCCCEEEEEChhcCHHHHHHh
No 244
>PRK06145 acyl-CoA synthetase; Validated
Probab=28.78 E-value=5.8e+02 Score=25.21 Aligned_cols=97 Identities=8% Similarity=0.075 Sum_probs=64.4
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCc--HHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIE--IPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~--~~~~~la~~~~G~~~v~l~ 126 (456)
++.+|++-. .+| -.+|+..+...+. ..... .++..+|++....+-... +....++++..|+..+..
T Consensus 148 ~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~---~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~- 222 (497)
T PRK06145 148 PTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSI---DHVIA-LGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIH- 222 (497)
T ss_pred ccceEEEEeCCCCCCCCcEEEEecHHHHHHHH---HHHHh-hCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEEC-
Confidence 567776532 222 3588888865433 33344 688999998877664322 223345667778776654
Q ss_pred CCCCHHHHHHHhhhcCCeEEEEccchHHHHh
Q 012774 127 PVNTESEISRQIQLSNPVIAFATSSVVHKLA 157 (456)
Q Consensus 127 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 157 (456)
+..++..+...+++.++..+...+.....+.
T Consensus 223 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll 253 (497)
T PRK06145 223 REFDPEAVLAAIERHRLTCAWMAPVMLSRVL 253 (497)
T ss_pred CcCCHHHHHHHHHHhCCeEEEehHHHHHHHH
Confidence 4567888889999999999988887766553
No 245
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=28.67 E-value=3e+02 Score=28.03 Aligned_cols=84 Identities=12% Similarity=0.037 Sum_probs=59.5
Q ss_pred cccHHHHHHHHHHhccCC--CCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEe-cCCCHHHHHHHHHHhcceeEEe
Q 012774 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVM-QRFDLKMMLKAVEEFRVTHAAV 287 (456)
Q Consensus 211 ~~th~~l~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~ 287 (456)
.+|...+...+......+ .+..++|++....+-..- .+...++.+..|+..+.. +....+.+...+.+.++..++.
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 135 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQ-HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIV 135 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEe
Confidence 468887765544433333 156788999888776433 235677888888887766 4678899999999999999988
Q ss_pred cHHHHHHH
Q 012774 288 TPPIVVAM 295 (456)
Q Consensus 288 ~P~~~~~l 295 (456)
.......+
T Consensus 136 ~~~~~~~~ 143 (573)
T PRK05605 136 WDKVAPTV 143 (573)
T ss_pred chhhHHHH
Confidence 76654433
No 246
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=28.37 E-value=4e+02 Score=26.95 Aligned_cols=84 Identities=8% Similarity=-0.101 Sum_probs=58.3
Q ss_pred hcccHHHHHHHHHHhccCC--CCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEec-CCCHHHHHHHHHHhcceeEE
Q 012774 210 VMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAA 286 (456)
Q Consensus 210 V~~th~~l~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 286 (456)
..+|...+...+......+ .+..+++++...++-..-+ ...+++++..|+..+.+. ....+.+...+++.++..++
T Consensus 54 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i 132 (546)
T PLN02330 54 KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEY-GIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIV 132 (546)
T ss_pred CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEE
Confidence 3578888865555444333 1567788888887755432 356678888899877664 45778899999999999887
Q ss_pred ecHHHHHH
Q 012774 287 VTPPIVVA 294 (456)
Q Consensus 287 ~~P~~~~~ 294 (456)
..+..+..
T Consensus 133 ~~~~~~~~ 140 (546)
T PLN02330 133 TNDTNYGK 140 (546)
T ss_pred Eccchhhh
Confidence 76654443
No 247
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=28.32 E-value=5.5e+02 Score=24.78 Aligned_cols=84 Identities=12% Similarity=0.083 Sum_probs=49.6
Q ss_pred ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCC--cHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeE
Q 012774 68 LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI--EIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVI 145 (456)
Q Consensus 68 ~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~--~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 145 (456)
-.+|++.+...+..++..+.- ..+..|++..+.|-.. .+...++..+..|+..+... ..++..+...++.. .+
T Consensus 113 V~~sh~~l~~~~~~~~~~~~~--~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~-~~~~~~~l~~i~~~--t~ 187 (386)
T TIGR02372 113 VTHSWAALLSEAQAIAKILGE--RPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLA-AAPASGIMRHARPG--DL 187 (386)
T ss_pred eEeeHHHHHHHHHHHHHHhCc--CCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecC-CCChHHHHHhhccC--CE
Confidence 468999998888777665521 1233456776666542 23345566677898887665 45555544444322 45
Q ss_pred EEEccchHHHH
Q 012774 146 AFATSSVVHKL 156 (456)
Q Consensus 146 vi~~~~~~~~~ 156 (456)
++..+.....+
T Consensus 188 ~~~~P~~l~~l 198 (386)
T TIGR02372 188 IVGTPFIWEQL 198 (386)
T ss_pred EEECcHHHHHH
Confidence 55666555444
No 248
>PF03744 BioW: 6-carboxyhexanoate--CoA ligase; InterPro: IPR005499 This family contains the enzyme 6-carboxyhexanoate--CoA ligase 6.2.1.14 from EC. This enzyme is involved in the first step of biotin synthesis, where it converts pimelate into pimeloyl-CoA []. The enzyme requires magnesium as a cofactor and forms a homodimer [].; GO: 0009102 biotin biosynthetic process
Probab=28.14 E-value=75 Score=28.17 Aligned_cols=41 Identities=27% Similarity=0.513 Sum_probs=25.4
Q ss_pred CCCcceEEEecCCcccccCCCccccccccCCCCeeeccceEEEc----------cCCcEEEecccc
Q 012774 386 PGKEGELSIRGPTIMKGYVGEPEVTSATLLPDGWMRTGDLCYID----------EDGFLFIVDRLK 441 (456)
Q Consensus 386 ~g~~Gel~i~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~----------~dg~l~~~GR~~ 441 (456)
||.++|||++- +|+- .-||+.|.++|+.. .-|++||+.+..
T Consensus 172 PgiiaELC~SD---------DP~Y------tTGYVA~~~~GY~RI~~mK~~G~~~GGRvffv~~~~ 222 (239)
T PF03744_consen 172 PGIIAELCWSD---------DPDY------TTGYVASKKFGYHRITNMKEAGSPKGGRVFFVDGSI 222 (239)
T ss_pred CcceEEEEecC---------CCCC------ceEEEEeCCcceEECccccccCCCCCCEEEEEeCCC
Confidence 68889999963 2221 23566777766652 236777776653
No 249
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=28.08 E-value=5.5e+02 Score=25.80 Aligned_cols=89 Identities=12% Similarity=0.014 Sum_probs=57.9
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCC-CCCEEEEEcCCCCc-HHHHHHHHHHhCCeEecCC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLS-KNDTAFVLSTNSIE-IPILYFSLLSLGVIISPAN 126 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~-~gd~V~l~~~~~~~-~~~~~la~~~~G~~~v~l~ 126 (456)
++.+|++.. .+| -.+|++.+...+..+... +++. ++|++....|-... .+..+++.+..|+..+..+
T Consensus 151 ~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~ 226 (525)
T PRK05851 151 SGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNAR----VGLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAP 226 (525)
T ss_pred CCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHH----hCCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcC
Confidence 577777543 222 358999888776655433 4667 88988877764432 2234677788898887655
Q ss_pred C---CCCHHHHHHHhhhcCCeEEEE
Q 012774 127 P---VNTESEISRQIQLSNPVIAFA 148 (456)
Q Consensus 127 ~---~~~~~~l~~~l~~~~~~~vi~ 148 (456)
. ...+..+...++..++.++.+
T Consensus 227 ~~~~~~~~~~~~~~i~~~~~t~~~~ 251 (525)
T PRK05851 227 TTAFSASPFRWLSWLSDSRATLTAA 251 (525)
T ss_pred HHHHHHCHHHHHHHHHHhCCeEEeC
Confidence 3 124566778888888876644
No 250
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=28.02 E-value=4.3e+02 Score=24.30 Aligned_cols=90 Identities=12% Similarity=-0.007 Sum_probs=53.2
Q ss_pred CcEEEECCCCceecHHHHHHHHHHHHHHhHhhcC-CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHH
Q 012774 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTR-LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISR 136 (456)
Q Consensus 58 ~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~g-i~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~ 136 (456)
++.+.....+.+-|+++-... ..+...+ + .| +.+|++| +....+-.-..+-+++.+.|..+..+-|...+.....
T Consensus 22 ~i~~K~E~~nptGS~K~R~a~-~~l~~a~-~-~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~ 97 (298)
T TIGR01139 22 NVFVKLEGRNPSGSVKDRIAL-NMIWDAE-K-RGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRK 97 (298)
T ss_pred eEEEEEcccCCCCcchHHHHH-HHHHHHH-H-cCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHH
Confidence 344444433344455442222 2233333 3 35 4677776 4444555555556677778987777666555455677
Q ss_pred HhhhcCCeEEEEccc
Q 012774 137 QIQLSNPVIAFATSS 151 (456)
Q Consensus 137 ~l~~~~~~~vi~~~~ 151 (456)
.++..++++++++..
T Consensus 98 ~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 98 LLKAYGAELVLTPGA 112 (298)
T ss_pred HHHHcCCEEEEECCC
Confidence 889999999998764
No 251
>cd01974 Nitrogenase_MoFe_beta Nitrogenase_MoFe_beta: Nitrogenase MoFe protein, beta subunit. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Molybdenum (Mo-) nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. This group contains the beta subunit of the MoFe protein. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=27.89 E-value=3.9e+02 Score=26.37 Aligned_cols=31 Identities=16% Similarity=0.142 Sum_probs=19.6
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHHHhCCeEecC
Q 012774 94 KNDTAFVLSTNSIEIPILYFSLLSLGVIISPA 125 (456)
Q Consensus 94 ~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l 125 (456)
.|.+|+|..+....+-++-+-. .+|..++.+
T Consensus 302 ~gkrv~i~g~~~~~~~la~~L~-elGm~v~~~ 332 (435)
T cd01974 302 HGKKFALYGDPDFLIGLTSFLL-ELGMEPVHV 332 (435)
T ss_pred CCCEEEEEcChHHHHHHHHHHH-HCCCEEEEE
Confidence 5788998886655444443443 788877543
No 252
>PRK11761 cysM cysteine synthase B; Provisional
Probab=27.39 E-value=3.9e+02 Score=24.70 Aligned_cols=89 Identities=12% Similarity=0.006 Sum_probs=55.2
Q ss_pred CcEEEECCCCceecHHHHHHHHHHHHHHhHhhcC-CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHH
Q 012774 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTR-LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISR 136 (456)
Q Consensus 58 ~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~g-i~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~ 136 (456)
++.+.....+-+=||++- -+..+...+.+ .| +.+|+.|.. ...+-.-..+-++|...|..+..+-|...+.....
T Consensus 28 ~i~~K~E~~nptGS~K~R--~a~~~~~~a~~-~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~ 103 (296)
T PRK11761 28 TILAKLEGNNPAGSVKDR--PALSMIVQAEK-RGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRA 103 (296)
T ss_pred EEEEEEcccCCCCCchhH--HHHHHHHHHHH-cCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHH
Confidence 344444433445566652 22333333333 35 467776654 44555556666777788987777666665667788
Q ss_pred HhhhcCCeEEEEcc
Q 012774 137 QIQLSNPVIAFATS 150 (456)
Q Consensus 137 ~l~~~~~~~vi~~~ 150 (456)
.++..++++++++.
T Consensus 104 ~~~~~GA~v~~~~~ 117 (296)
T PRK11761 104 AMRAYGAELILVPK 117 (296)
T ss_pred HHHHcCCEEEEeCC
Confidence 88999999999985
No 253
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=27.25 E-value=2.4e+02 Score=29.15 Aligned_cols=97 Identities=13% Similarity=0.068 Sum_probs=65.4
Q ss_pred CCCCEEEEEcCCCCCCCCchhcccHHHHHHHHHHhccCC--CCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEe-c
Q 012774 190 CQSDVAAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVM-Q 266 (456)
Q Consensus 190 ~~~~~a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~-~ 266 (456)
.++.+|++.... .+|. ...+|...+...+......+ .+..++|++...+|... -....+++++..|+..+.+ +
T Consensus 70 ~p~~~Al~~~~~-~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~v~i~~ 145 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPGE--VRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIP-EAAIAMLACARIGAIHSVVFG 145 (625)
T ss_pred CCCCeEEEEEcC-CCCc--eEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCCEEeccCC
Confidence 456666654321 1222 23578887765544433332 26789999999888643 3346677888889887766 4
Q ss_pred CCCHHHHHHHHHHhcceeEEecHH
Q 012774 267 RFDLKMMLKAVEEFRVTHAAVTPP 290 (456)
Q Consensus 267 ~~~~~~~~~~i~~~~~t~~~~~P~ 290 (456)
.+.++.+...++..++..++....
T Consensus 146 ~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 146 GFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcCc
Confidence 688999999999999999887643
No 254
>PRK07798 acyl-CoA synthetase; Validated
Probab=27.18 E-value=6.1e+02 Score=25.24 Aligned_cols=84 Identities=7% Similarity=-0.141 Sum_probs=56.5
Q ss_pred cccHHHHHHHHHHhccCC--CCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEec-CCCHHHHHHHHHHhcceeEEe
Q 012774 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (456)
Q Consensus 211 ~~th~~l~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 287 (456)
.+|...+...+......+ .+..+++++....+-.. -.....++.+..|+..+..+ ....+.+...+++.++..++.
T Consensus 28 ~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~-~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~ 106 (533)
T PRK07798 28 RLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRI-EYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALVY 106 (533)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEEE
Confidence 577777754444333222 15677888887776432 22356677788888877765 567889999999999999888
Q ss_pred cHHHHHHH
Q 012774 288 TPPIVVAM 295 (456)
Q Consensus 288 ~P~~~~~l 295 (456)
.......+
T Consensus 107 ~~~~~~~~ 114 (533)
T PRK07798 107 EREFAPRV 114 (533)
T ss_pred chhhHHHH
Confidence 76654443
No 255
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=26.93 E-value=1.6e+02 Score=26.47 Aligned_cols=94 Identities=16% Similarity=0.251 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe-EecCCCCCCHH---HHHHHhhhcCCeEEE
Q 012774 72 FSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVI-ISPANPVNTES---EISRQIQLSNPVIAF 147 (456)
Q Consensus 72 y~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~-~v~l~~~~~~~---~l~~~l~~~~~~~vi 147 (456)
++++.++.+.+...+.+...-.++ +..+...+...++.-.+++-..+.. ..+ ....++. ++...++..++++||
T Consensus 127 ~~~~~~~L~~l~~~~~~~~~~~~~-~~~v~~h~~~~Y~~~~~gl~~~~~~~~~~-~~~ps~~~l~~l~~~ik~~~v~~i~ 204 (256)
T PF01297_consen 127 AEKYLKELDELDAEIKEKLAKLPG-RPVVVYHDAFQYFAKRYGLKVIGVIEISP-GEEPSPKDLAELIKLIKENKVKCIF 204 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSG-GEEEEEESTTHHHHHHTT-EEEEEESSSS-SSSS-HHHHHHHHHHHHHTT-SEEE
T ss_pred HHHHHHHHHHHHHHHHHHhhcccC-CeEEEEChHHHHHHHhcCCceeeeecccc-ccCCCHHHHHHHHHHhhhcCCcEEE
Confidence 444555555555555442222233 6677788899988888877666644 111 2233444 455667889999999
Q ss_pred EccchHHH----H-hccCCeEEEEc
Q 012774 148 ATSSVVHK----L-AKLKHRTILID 167 (456)
Q Consensus 148 ~~~~~~~~----~-~~~~~~~~~~~ 167 (456)
+++....+ + .+.+.+++.++
T Consensus 205 ~e~~~~~~~~~~la~~~g~~vv~ld 229 (256)
T PF01297_consen 205 TEPQFSSKLAEALAKETGVKVVYLD 229 (256)
T ss_dssp EETTS-THHHHHHHHCCT-EEEESS
T ss_pred ecCCCChHHHHHHHHHcCCcEEEeC
Confidence 98655443 2 23455555544
No 256
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=26.62 E-value=6.3e+02 Score=26.45 Aligned_cols=84 Identities=8% Similarity=-0.062 Sum_probs=58.4
Q ss_pred ccHHHHHHHHHHhccCC--CCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEe-cCCCHHHHHHHHHHhcceeEEec
Q 012774 212 LTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVM-QRFDLKMMLKAVEEFRVTHAAVT 288 (456)
Q Consensus 212 ~th~~l~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~ 288 (456)
+|...+...+..+...+ .+..++|++...++-..-. ....++++..|+..+.+ +...++.+...++..+++.++..
T Consensus 77 ~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~ 155 (660)
T PLN02430 77 KTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQW-IVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQ 155 (660)
T ss_pred EEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEEC
Confidence 57777755544433322 1678889888877754322 35567788888887766 46788999999999999999987
Q ss_pred HHHHHHHh
Q 012774 289 PPIVVAMS 296 (456)
Q Consensus 289 P~~~~~l~ 296 (456)
...+..++
T Consensus 156 ~~~~~~~~ 163 (660)
T PLN02430 156 DKKIKELL 163 (660)
T ss_pred HHHHHHHH
Confidence 76544443
No 257
>PRK13383 acyl-CoA synthetase; Provisional
Probab=26.43 E-value=3.7e+02 Score=26.89 Aligned_cols=85 Identities=12% Similarity=0.033 Sum_probs=58.8
Q ss_pred cccHHHHHHHHHHhccCC--CCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEec-CCCHHHHHHHHHHhcceeEEe
Q 012774 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (456)
Q Consensus 211 ~~th~~l~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 287 (456)
.+|...+...+......+ .+..+++++...++-.- .....+++.+..|+..+... ....+.+...+++.++..++.
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~-~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 138 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGR-GFVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVA 138 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEE
Confidence 466666654444333322 15678888888776432 33456778888899888775 568899999999999999998
Q ss_pred cHHHHHHHh
Q 012774 288 TPPIVVAMS 296 (456)
Q Consensus 288 ~P~~~~~l~ 296 (456)
.+.....+.
T Consensus 139 ~~~~~~~~~ 147 (516)
T PRK13383 139 DNEFAERIA 147 (516)
T ss_pred chhHHHHHH
Confidence 877665543
No 258
>PRK10411 DNA-binding transcriptional activator FucR; Provisional
Probab=26.27 E-value=3.2e+02 Score=24.37 Aligned_cols=72 Identities=13% Similarity=0.190 Sum_probs=46.8
Q ss_pred CHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCC-------CCHHHHHHHHHhCCCCceEeccC
Q 012774 269 DLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAP-------LGKDTIMAFASKFPKVVLVQAYG 341 (456)
Q Consensus 269 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~-------~~~~~~~~~~~~~~~~~i~~~yG 341 (456)
....+.+.|.+...|++.-.+..+..|... ++++.++.||+. +.+...+.+.+...+..++..-|
T Consensus 104 T~~~l~~~L~~~~ltVvTNs~~ia~~l~~~--------~~~~vil~GG~~~~~~~~~~G~~a~~~l~~~~~d~afis~~g 175 (240)
T PRK10411 104 TCWYLARQLPDINIQVFTNSHPICQELGKR--------ERIQLISSGGTLERKYGCYVNPSLISQLKSLEIDLFIFSCEG 175 (240)
T ss_pred HHHHHHHhhCCCCeEEEeCCHHHHHHHhcC--------CCCEEEEECCEEeCCCCceECHHHHHHHHhcCCCEEEEecee
Confidence 344555666555677777777777777543 457788888853 33455566666545777888888
Q ss_pred ccccccc
Q 012774 342 LTESTAG 348 (456)
Q Consensus 342 ~tE~~~~ 348 (456)
.++.+++
T Consensus 176 i~~~~G~ 182 (240)
T PRK10411 176 IDSSGAL 182 (240)
T ss_pred ECCCCCc
Confidence 8754443
No 259
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=26.26 E-value=2.5e+02 Score=28.57 Aligned_cols=88 Identities=11% Similarity=0.038 Sum_probs=65.8
Q ss_pred hhcccHHHHHHHHHHhccCCC----CCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEe-cCCCHHHHHHHHHHhcce
Q 012774 209 GVMLTHRNLTAAVASSFASSP----KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVM-QRFDLKMMLKAVEEFRVT 283 (456)
Q Consensus 209 ~V~~th~~l~~~~~~~~~~~~----~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t 283 (456)
+..+|+..+...+..+...+. +..++|++....|-..-+ ....+++...|+.+... +.++..++...++..++.
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~-~~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEF-VELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 678888888766655554442 257799999999976533 34566777888877666 468999999999999999
Q ss_pred eEEecHHHHHHHhc
Q 012774 284 HAAVTPPIVVAMSK 297 (456)
Q Consensus 284 ~~~~~P~~~~~l~~ 297 (456)
+++.....+..+..
T Consensus 122 iif~d~~~~~~i~~ 135 (537)
T KOG1176|consen 122 LIFVDEDFYDKISE 135 (537)
T ss_pred EEEEcCchHHHHHH
Confidence 99998777766644
No 260
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=26.24 E-value=3.3e+02 Score=26.82 Aligned_cols=56 Identities=25% Similarity=0.241 Sum_probs=32.5
Q ss_pred CCCCCEEEEEcCCCCcHHHHHH--HHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEc
Q 012774 92 LSKNDTAFVLSTNSIEIPILYF--SLLSLGVIISPANPVNTESEISRQIQLSNPVIAFAT 149 (456)
Q Consensus 92 i~~gd~V~l~~~~~~~~~~~~l--a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 149 (456)
+++||.|.+ .++.+.....++ .+.+.|+.+..++...+++.++..++. +.++|++.
T Consensus 97 l~~GD~VI~-~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~e 154 (432)
T PRK06702 97 CSSGDHLLC-SSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALAND-KTKLVYAE 154 (432)
T ss_pred cCCCCEEEE-CCCchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEEE
Confidence 577887654 333332222222 245678877777776677777777754 45566653
No 261
>PRK07514 malonyl-CoA synthase; Validated
Probab=26.23 E-value=3.6e+02 Score=26.76 Aligned_cols=83 Identities=10% Similarity=-0.023 Sum_probs=58.7
Q ss_pred hcccHHHHHHHHHHhc---cCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEec-CCCHHHHHHHHHHhcceeE
Q 012774 210 VMLTHRNLTAAVASSF---ASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHA 285 (456)
Q Consensus 210 V~~th~~l~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 285 (456)
..+|...+...+.... ... +..+++++....+-.. -....+++++..|+..+... ....+.+...++..+++.+
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~~~-g~~~gd~v~i~~~~~~-e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 104 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLVAL-GVKPGDRVAVQVEKSP-EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALV 104 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEE
Confidence 3577777754443333 333 6778888888777542 33466778888998887765 5688999999999999999
Q ss_pred EecHHHHHH
Q 012774 286 AVTPPIVVA 294 (456)
Q Consensus 286 ~~~P~~~~~ 294 (456)
+..+.....
T Consensus 105 i~~~~~~~~ 113 (504)
T PRK07514 105 VCDPANFAW 113 (504)
T ss_pred EEccchhHH
Confidence 887765543
No 262
>PRK08162 acyl-CoA synthetase; Validated
Probab=26.08 E-value=3e+02 Score=27.73 Aligned_cols=84 Identities=8% Similarity=-0.067 Sum_probs=60.1
Q ss_pred cccHHHHHHHHHHhccCC--CCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEec-CCCHHHHHHHHHHhcceeEEe
Q 012774 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (456)
Q Consensus 211 ~~th~~l~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 287 (456)
.+|...+...+......+ .+...++++....+-..- .+..+++.+..|+..+.+. ....+.+...+++.+++.++.
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~ 121 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPA-MVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIV 121 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchH-HHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEE
Confidence 478887765554443333 157788999888776542 2356778888888877664 568899999999999999988
Q ss_pred cHHHHHHH
Q 012774 288 TPPIVVAM 295 (456)
Q Consensus 288 ~P~~~~~l 295 (456)
.+.....+
T Consensus 122 ~~~~~~~~ 129 (545)
T PRK08162 122 DTEFAEVA 129 (545)
T ss_pred ccchhhHH
Confidence 87665443
No 263
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=26.03 E-value=1e+02 Score=16.67 Aligned_cols=18 Identities=22% Similarity=0.575 Sum_probs=13.6
Q ss_pred EccCCcEEEeccccccee
Q 012774 428 IDEDGFLFIVDRLKDLIK 445 (456)
Q Consensus 428 ~~~dg~l~~~GR~~d~ik 445 (456)
++++|.+++.++....|+
T Consensus 9 v~~~g~i~VaD~~n~rV~ 26 (28)
T PF01436_consen 9 VDSDGNIYVADSGNHRVQ 26 (28)
T ss_dssp EETTSEEEEEECCCTEEE
T ss_pred EeCCCCEEEEECCCCEEE
Confidence 348899999888776664
No 264
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=26.01 E-value=3.6e+02 Score=25.33 Aligned_cols=62 Identities=6% Similarity=0.074 Sum_probs=46.9
Q ss_pred HhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEcc
Q 012774 85 YLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (456)
Q Consensus 85 ~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 150 (456)
-|.+ .|+.||++|+|..--+.-.+...+|... |.-++.++.... .-+..++..+++..+...
T Consensus 173 pLk~-~g~~pG~~vgI~GlGGLGh~aVq~AKAM-G~rV~vis~~~~--kkeea~~~LGAd~fv~~~ 234 (360)
T KOG0023|consen 173 PLKR-SGLGPGKWVGIVGLGGLGHMAVQYAKAM-GMRVTVISTSSK--KKEEAIKSLGADVFVDST 234 (360)
T ss_pred hhHH-cCCCCCcEEEEecCcccchHHHHHHHHh-CcEEEEEeCCch--hHHHHHHhcCcceeEEec
Confidence 3555 7999999999999888999999999877 777777765542 334577778887776544
No 265
>PLN02409 serine--glyoxylate aminotransaminase
Probab=26.00 E-value=5.5e+02 Score=24.86 Aligned_cols=12 Identities=25% Similarity=0.094 Sum_probs=4.9
Q ss_pred HHhhhcCCeEEE
Q 012774 136 RQIQLSNPVIAF 147 (456)
Q Consensus 136 ~~l~~~~~~~vi 147 (456)
.+++..+.+++.
T Consensus 101 ~~~~~~g~~v~~ 112 (401)
T PLN02409 101 DQMQRLNFDVDV 112 (401)
T ss_pred HHHHHcCCceEE
Confidence 344444444433
No 266
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=25.87 E-value=1.4e+02 Score=23.86 Aligned_cols=55 Identities=16% Similarity=0.086 Sum_probs=35.7
Q ss_pred cHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEc--CCCCcHHHHHHHHHHhCCeEecC
Q 012774 71 SFSEFTRRTNSLASYLQNVTRLSKNDTAFVLS--TNSIEIPILYFSLLSLGVIISPA 125 (456)
Q Consensus 71 Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~--~~~~~~~~~~la~~~~G~~~v~l 125 (456)
+...-.+.-..++..+.+.+.+++||.+.++. .+++..+-+...+-..|+..+-|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIal 136 (138)
T PF13580_consen 80 AISNDLEYDEGFARQLLALYDIRPGDVLIVISNSGNSPNVIEAAEEAKERGMKVIAL 136 (138)
T ss_dssp HHHHHTTGGGTHHHHHHHHTT--TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEE
T ss_pred hhhcccchhhHHHHHHHHHcCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 45555555667778887756789999988876 46677777788888888776543
No 267
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=25.79 E-value=33 Score=16.03 Aligned_cols=9 Identities=33% Similarity=0.726 Sum_probs=6.5
Q ss_pred ccCcccccc
Q 012774 339 AYGLTESTA 347 (456)
Q Consensus 339 ~yG~tE~~~ 347 (456)
.||+|++..
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 488888754
No 268
>PF14552 Tautomerase_2: Tautomerase enzyme; PDB: 2AAG_C 2AAL_A 2AAJ_A 1MWW_C.
Probab=25.78 E-value=1.1e+02 Score=22.12 Aligned_cols=51 Identities=22% Similarity=0.210 Sum_probs=28.4
Q ss_pred CCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCC
Q 012774 56 DDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSI 106 (456)
Q Consensus 56 p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~ 106 (456)
.++.-++.-..+.--|-++=.+.-+.++..|.+++|+.+.|....+.+|..
T Consensus 26 s~~~v~I~It~~~gRs~e~K~~ly~~l~~~L~~~~gi~p~Dv~I~l~e~~~ 76 (82)
T PF14552_consen 26 SDDFVIIQITSGAGRSTEQKKALYRALAERLAEKLGIRPEDVMIVLVENPR 76 (82)
T ss_dssp -TT-EEEEEEECS---HHHHHHHHHHHHHHHHHHH---GGGEEEEEEEE-G
T ss_pred CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEECCc
Confidence 344444332113344556666777888899988799999998887777654
No 269
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=25.73 E-value=3.4e+02 Score=27.59 Aligned_cols=95 Identities=12% Similarity=0.028 Sum_probs=64.0
Q ss_pred EEEEcCCCCCCCCchhcccHHHHHHHHHHhccCC---CCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEe-cCCCH
Q 012774 195 AAIMYSSGTTGRVKGVMLTHRNLTAAVASSFASS---PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVM-QRFDL 270 (456)
Q Consensus 195 a~i~~TSGtTG~PK~V~~th~~l~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~~~~ 270 (456)
..++|-+-.++. -.+|.+.+...+......+ .+. ++|++..++|+..-. ...++++...|+..... +.|.+
T Consensus 27 ~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~-~~a~LA~~riGAI~~~vf~~f~~ 101 (528)
T COG0365 27 TAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEA-VIALLATARIGAIPAVVSPGLSA 101 (528)
T ss_pred eEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHH-HHHHHHHHHcCCEEeecccCCCH
Confidence 334444433333 4677777754444333332 245 999999999986533 35677888888875554 67899
Q ss_pred HHHHHHHHHhcceeEEecHHHHHH
Q 012774 271 KMMLKAVEEFRVTHAAVTPPIVVA 294 (456)
Q Consensus 271 ~~~~~~i~~~~~t~~~~~P~~~~~ 294 (456)
+.+..-|.+.++.+++.....++.
T Consensus 102 ~al~~Ri~d~~~k~vit~d~~~~~ 125 (528)
T COG0365 102 EAVADRIADLGPKVLIADDGTFRN 125 (528)
T ss_pred HHHHHHHHccCCCEEEEecccccc
Confidence 999999999999988876655543
No 270
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=25.55 E-value=1.1e+02 Score=25.71 Aligned_cols=77 Identities=5% Similarity=0.051 Sum_probs=44.9
Q ss_pred hcceEEEecCCCHHHHHHHHHHhcceeEEecHHHHHHHhcCCCCCCCCCCCceEEEecCCCC-CHHHHHHHHHhCCCCce
Q 012774 258 LMETAVVMQRFDLKMMLKAVEEFRVTHAAVTPPIVVAMSKGGSTDGYDLSSLETVACGAAPL-GKDTIMAFASKFPKVVL 336 (456)
Q Consensus 258 ~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~v~~gG~~~-~~~~~~~~~~~~~~~~i 336 (456)
..+.+++++......+.+.+ ..++..-+..+.++..+++.... ...+..+.||.+- -.+..+.+++.+|++.+
T Consensus 4 ~~adlv~~DG~~i~~~~~~~-g~~~~~rv~g~dl~~~l~~~~~~-----~~~~ifllG~~~~~~~~~~~~l~~~yP~l~i 77 (172)
T PF03808_consen 4 NSADLVLPDGMPIVWAARLL-GRPLPERVTGSDLFPDLLRRAEQ-----RGKRIFLLGGSEEVLEKAAANLRRRYPGLRI 77 (172)
T ss_pred HhCCEEecCCHHHHHHHHHc-CCCCCcccCHHHHHHHHHHHHHH-----cCCeEEEEeCCHHHHHHHHHHHHHHCCCeEE
Confidence 44556666554444444555 44443334556666666664332 2357788887653 24666788888888887
Q ss_pred Eecc
Q 012774 337 VQAY 340 (456)
Q Consensus 337 ~~~y 340 (456)
.-.|
T Consensus 78 vg~~ 81 (172)
T PF03808_consen 78 VGYH 81 (172)
T ss_pred EEec
Confidence 6543
No 271
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=25.41 E-value=3.1e+02 Score=25.42 Aligned_cols=58 Identities=12% Similarity=0.053 Sum_probs=42.2
Q ss_pred CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEcc
Q 012774 92 LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (456)
Q Consensus 92 i~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 150 (456)
+++|++|. =...+---+.+-+.|...|..++.+=|..-..+-..+|+..++++++++.
T Consensus 59 l~pG~tIV-E~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 59 LKPGGTIV-EATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred CCCCCEEE-EcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 88998443 33344444555555566698888877777677778999999999999986
No 272
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=25.37 E-value=4.6e+02 Score=26.57 Aligned_cols=100 Identities=9% Similarity=0.130 Sum_probs=58.8
Q ss_pred CCCcEEEECC---CC----ceecHHHHHHHHHHHHHHhHhhcC-CCCCCEEEEEcCCCCc---HHHHHHHHHHhCCeEec
Q 012774 56 DDTVALINSV---TG----LRVSFSEFTRRTNSLASYLQNVTR-LSKNDTAFVLSTNSIE---IPILYFSLLSLGVIISP 124 (456)
Q Consensus 56 p~~~A~~~~~---~~----~~~Ty~eL~~~~~~~a~~L~~~~g-i~~gd~V~l~~~~~~~---~~~~~la~~~~G~~~v~ 124 (456)
++.+|++... +| -.+|+..+...+......+.. .+ +.+++.+.+....... +....+..+..|...+.
T Consensus 207 ~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 285 (560)
T PRK08751 207 PDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAG-TGKLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHL 285 (560)
T ss_pred cccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhcc-ccccCCCCceEEEecChHHHHHHHHhhhhHhhccceEEE
Confidence 5667765432 22 358899988877776666543 23 6677666554322211 11122344445555444
Q ss_pred CCCCCCHHHHHHHhhhcCCeEEEEccchHHHH
Q 012774 125 ANPVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (456)
Q Consensus 125 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 156 (456)
+........+...++..++.++...+.....+
T Consensus 286 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 317 (560)
T PRK08751 286 ISNPRDMPGFVKELKKTRFTAFTGVNTLFNGL 317 (560)
T ss_pred ecCcCCHHHHHHHHHhcceeEecChHHHHHHH
Confidence 44445677788888999988887766655544
No 273
>PRK09088 acyl-CoA synthetase; Validated
Probab=25.15 E-value=6e+02 Score=25.08 Aligned_cols=78 Identities=13% Similarity=-0.043 Sum_probs=54.8
Q ss_pred cccHHHHHHHHHHhccCC--CCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEec-CCCHHHHHHHHHHhcceeEEe
Q 012774 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (456)
Q Consensus 211 ~~th~~l~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 287 (456)
.+|...+...+......+ .+...++++....+-... .+...++++..|+..+.+. ....+.+...+++.+++.++.
T Consensus 22 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~-~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~ 100 (488)
T PRK09088 22 RWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVW-LVALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLLLG 100 (488)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEEE
Confidence 478887755544433322 156788888887775543 2455678888888877774 567889999999999998876
Q ss_pred cH
Q 012774 288 TP 289 (456)
Q Consensus 288 ~P 289 (456)
..
T Consensus 101 ~~ 102 (488)
T PRK09088 101 DD 102 (488)
T ss_pred cc
Confidence 54
No 274
>PLN03013 cysteine synthase
Probab=24.92 E-value=4.4e+02 Score=25.95 Aligned_cols=81 Identities=14% Similarity=0.047 Sum_probs=53.8
Q ss_pred ceecHHHHHHHHHHHHHHhHhhcC-CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEE
Q 012774 68 LRVSFSEFTRRTNSLASYLQNVTR-LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (456)
Q Consensus 68 ~~~Ty~eL~~~~~~~a~~L~~~~g-i~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 146 (456)
-+-|+++= -+..+-....+ .| +++|....+....+-.-+.+-++|...|..+..+-|...+.+....++..+++++
T Consensus 149 PtGSfKdR--~A~~~l~~a~~-~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi 225 (429)
T PLN03013 149 PCCSVKDR--IGYSMVTDAEQ-KGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELV 225 (429)
T ss_pred CccccHHH--HHHHHHHHHHH-cCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEE
Confidence 34556552 22222223333 35 5788665566666666677777788889877776666667777888999999999
Q ss_pred EEccc
Q 012774 147 FATSS 151 (456)
Q Consensus 147 i~~~~ 151 (456)
++++.
T Consensus 226 ~v~~~ 230 (429)
T PLN03013 226 LTDPA 230 (429)
T ss_pred EECCC
Confidence 98753
No 275
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=24.90 E-value=63 Score=28.97 Aligned_cols=70 Identities=16% Similarity=0.170 Sum_probs=53.7
Q ss_pred HHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCC--CHHHHHHHhhh-cCCeEEEEcc
Q 012774 80 NSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVN--TESEISRQIQL-SNPVIAFATS 150 (456)
Q Consensus 80 ~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~--~~~~l~~~l~~-~~~~~vi~~~ 150 (456)
+.+-..+.+ +-.-||.-=.+.||.+..+++.--++--++.+-+|++|+. ..+.+..+++. ++++++|..+
T Consensus 96 DE~ID~iiR-~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tS 168 (375)
T KOG0633|consen 96 DELIDLIIR-CVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTS 168 (375)
T ss_pred HHHHHHHHh-heecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcC
Confidence 344455555 5667885556688899999999999999999999999865 56888888874 4888888754
No 276
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=24.76 E-value=84 Score=21.73 Aligned_cols=29 Identities=10% Similarity=0.054 Sum_probs=16.0
Q ss_pred cHHHHHHHHHHHHHHhHhhcCCCCCCEEEE
Q 012774 71 SFSEFTRRTNSLASYLQNVTRLSKNDTAFV 100 (456)
Q Consensus 71 Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l 100 (456)
-|-+-.=+..-+-..|.+ .|++.||.|.|
T Consensus 34 ~rf~~~L~~~Gv~~~L~~-~G~~~GD~V~I 62 (69)
T PF09269_consen 34 RRFQRKLKKMGVEKALRK-AGAKEGDTVRI 62 (69)
T ss_dssp HHHHHHHHHTTHHHHHHT-TT--TT-EEEE
T ss_pred HHHHHHHHHCCHHHHHHH-cCCCCCCEEEE
Confidence 333333344445567777 89999999976
No 277
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=24.64 E-value=3.3e+02 Score=25.00 Aligned_cols=55 Identities=11% Similarity=0.043 Sum_probs=35.5
Q ss_pred CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCC----------CCCHHHHHHHhhh-cCCeEEEEc
Q 012774 92 LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANP----------VNTESEISRQIQL-SNPVIAFAT 149 (456)
Q Consensus 92 i~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~----------~~~~~~l~~~l~~-~~~~~vi~~ 149 (456)
+++||.|.+.-+ .+...+.++...|+.++.+.+ ..+.+.+++.++. .++++++..
T Consensus 96 ~~~gd~Vlv~~~---~h~s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 96 CGPGDKILIDRN---CHKSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred CCCCCEEEEeCC---chHHHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 468998886643 333345566678887766644 3567888888865 456765543
No 278
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=24.55 E-value=4.3e+02 Score=26.25 Aligned_cols=84 Identities=8% Similarity=-0.082 Sum_probs=58.0
Q ss_pred cccHHHHHHHHHHhccCC--CCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEec-CCCHHHHHHHHHHhcceeEEe
Q 012774 211 MLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAAV 287 (456)
Q Consensus 211 ~~th~~l~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 287 (456)
.+|...+...+......+ .+...++++....+-.. ..+..++.++..|+..+..+ ......+...+++.+++.++.
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~-~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~ 89 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNP-EFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIV 89 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCH-HHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEE
Confidence 356666644433333222 15778899888877643 33566788899999888775 567888889999999999888
Q ss_pred cHHHHHHH
Q 012774 288 TPPIVVAM 295 (456)
Q Consensus 288 ~P~~~~~l 295 (456)
.......+
T Consensus 90 ~~~~~~~~ 97 (502)
T PRK08276 90 SAALADTA 97 (502)
T ss_pred ccchhhHH
Confidence 77665544
No 279
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=24.53 E-value=4.4e+02 Score=25.34 Aligned_cols=59 Identities=14% Similarity=0.068 Sum_probs=45.1
Q ss_pred CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEcc
Q 012774 92 LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (456)
Q Consensus 92 i~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 150 (456)
+++|....+....+-.-..+-++|...|..+..+-|...+......++..+++++++++
T Consensus 107 i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 107 ITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred cCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 67785545556666666777778888899877776766667778899999999999874
No 280
>PRK05850 acyl-CoA synthetase; Validated
Probab=24.45 E-value=7.1e+02 Score=25.34 Aligned_cols=84 Identities=11% Similarity=-0.058 Sum_probs=58.7
Q ss_pred hcccHHHHHHHHHHhccCCC--CCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEecC----CCHHHHHHHHHHhcce
Q 012774 210 VMLTHRNLTAAVASSFASSP--KRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQR----FDLKMMLKAVEEFRVT 283 (456)
Q Consensus 210 V~~th~~l~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t 283 (456)
..+|...+...+......+. + .++|++...++-.. --...+++.+..|+.++.++. ...+.+...|++.++.
T Consensus 34 ~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~-~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~ 111 (578)
T PRK05850 34 ETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGL-EYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPS 111 (578)
T ss_pred eeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcc-cHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCC
Confidence 35788877554444333321 3 46788888887543 334667788889998888753 3568899999999999
Q ss_pred eEEecHHHHHHH
Q 012774 284 HAAVTPPIVVAM 295 (456)
Q Consensus 284 ~~~~~P~~~~~l 295 (456)
.++..+.....+
T Consensus 112 ~il~~~~~~~~~ 123 (578)
T PRK05850 112 VVLTTSAVVDDV 123 (578)
T ss_pred EEEEcHHHHHHH
Confidence 999888766554
No 281
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=24.20 E-value=2.4e+02 Score=21.57 Aligned_cols=39 Identities=21% Similarity=0.278 Sum_probs=29.1
Q ss_pred HHHHhHhhcCCCCCCEEEEEcCC-CCcHHHHHHHHHHhCCe
Q 012774 82 LASYLQNVTRLSKNDTAFVLSTN-SIEIPILYFSLLSLGVI 121 (456)
Q Consensus 82 ~a~~L~~~~gi~~gd~V~l~~~~-~~~~~~~~la~~~~G~~ 121 (456)
+...+.+ .++.++..|.++|.. +.....+...+...|..
T Consensus 67 ~~~~~~~-~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~~ 106 (122)
T cd01448 67 FAELLGS-LGISNDDTVVVYDDGGGFFAARAWWTLRYFGHE 106 (122)
T ss_pred HHHHHHH-cCCCCCCEEEEECCCCCccHHHHHHHHHHcCCC
Confidence 4444555 688889999999988 47777777777788854
No 282
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=23.98 E-value=1.2e+02 Score=28.45 Aligned_cols=52 Identities=17% Similarity=0.244 Sum_probs=40.7
Q ss_pred eecHHHHHHH------HHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCe
Q 012774 69 RVSFSEFTRR------TNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVI 121 (456)
Q Consensus 69 ~~Ty~eL~~~------~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~ 121 (456)
.+.|.++... ...+...+.+ .|+.+++.|.++|..+.....+++++-.+|..
T Consensus 238 nip~~~~~~~~~~~~~~~el~~~~~~-~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~ 295 (320)
T PLN02723 238 CVPFPQMLDSSQTLLPAEELKKRFEQ-EGISLDSPIVASCGTGVTACILALGLHRLGKT 295 (320)
T ss_pred ccCHHHhcCCCCCCCCHHHHHHHHHh-cCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 3666665432 4567777777 89999999999999998888888888888864
No 283
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=23.95 E-value=3.5e+02 Score=27.98 Aligned_cols=77 Identities=16% Similarity=0.128 Sum_probs=56.2
Q ss_pred cccHHHHHHHHHHhc---cCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEe-cCCCHHHHHHHHHHhcceeEE
Q 012774 211 MLTHRNLTAAVASSF---ASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVM-QRFDLKMMLKAVEEFRVTHAA 286 (456)
Q Consensus 211 ~~th~~l~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 286 (456)
.+|.+.+...+..+. ... +..++|++...+|..- -....+++++..|+..+.+ +.+..+.+...|+..++..++
T Consensus 84 ~~Ty~eL~~~v~~lA~~L~~~-Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li 161 (629)
T PRK10524 84 TYTFRQLHDEVNRMAAMLRSL-GVQRGDRVLIYMPMIA-EAAFAMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLIV 161 (629)
T ss_pred EEeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEECCCCH-HHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEE
Confidence 468887755444333 333 6789999999888643 2345677888889887666 467889999999999999987
Q ss_pred ecH
Q 012774 287 VTP 289 (456)
Q Consensus 287 ~~P 289 (456)
...
T Consensus 162 ~~~ 164 (629)
T PRK10524 162 SAD 164 (629)
T ss_pred Ecc
Confidence 754
No 284
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=23.66 E-value=3.7e+02 Score=26.70 Aligned_cols=70 Identities=13% Similarity=0.152 Sum_probs=46.6
Q ss_pred CCHHHHhhhcccCCCCCC-CCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHH
Q 012774 38 ISAVDYVSSLRATLPWRD-DDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPI 110 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~-p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~ 110 (456)
.++.+.+.+....+.... -+..|+-.. .....+|+++.+.++.++..+.+ .+.++..+.+++++..-=++
T Consensus 353 ~~l~~~i~~~l~~~~~~~~~~~~Alal~-g~~~~~f~~iq~lA~~i~~~~~~--~~~~~~Plivv~e~D~aKvL 423 (473)
T PF06277_consen 353 EELAEAIREALEWFDLEGEDQPVALALP-GKPNPSFAEIQELAEAIAEGMAE--LINPDQPLIVVVEQDMAKVL 423 (473)
T ss_pred HHHHHHHHHHHHhhcccCCCCcEEEEeC-CCCCCCHHHHHHHHHHHHHHHHh--hccCCCCEEEEECchHHHHH
Confidence 456666666655431111 234455443 24689999999999999999998 36778888888877654433
No 285
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=23.57 E-value=3.2e+02 Score=25.68 Aligned_cols=14 Identities=14% Similarity=0.124 Sum_probs=5.4
Q ss_pred HHHHHHHhHhhcCC
Q 012774 79 TNSLASYLQNVTRL 92 (456)
Q Consensus 79 ~~~~a~~L~~~~gi 92 (456)
.+++...|.+.+|.
T Consensus 34 ~~~~~~~la~~~g~ 47 (356)
T cd06451 34 MDEILEGLRYVFQT 47 (356)
T ss_pred HHHHHHHHHHHhcC
Confidence 33333344433343
No 286
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=23.21 E-value=7.2e+02 Score=25.01 Aligned_cols=85 Identities=9% Similarity=-0.027 Sum_probs=56.1
Q ss_pred eecHHHHHHHHHHHHHHhHhhcCC-CCCCEEEEEcCCCC-cHHHHHHHHHHhCCeEecCC-CCCCHHHHHHHhhhcCCeE
Q 012774 69 RVSFSEFTRRTNSLASYLQNVTRL-SKNDTAFVLSTNSI-EIPILYFSLLSLGVIISPAN-PVNTESEISRQIQLSNPVI 145 (456)
Q Consensus 69 ~~Ty~eL~~~~~~~a~~L~~~~gi-~~gd~V~l~~~~~~-~~~~~~la~~~~G~~~v~l~-~~~~~~~l~~~l~~~~~~~ 145 (456)
.+|+..+...+..+.. . .++ .+++++....+-.. -.+..+++.+..|+..+..+ ....++.+...++..++..
T Consensus 193 ~~s~~~l~~~~~~~~~---~-~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~ 268 (542)
T PRK07786 193 VLTHANLTGQAMTCLR---T-NGADINSDVGFVGVPLFHIAGIGSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTG 268 (542)
T ss_pred hhhHHHHHHHHHHHHH---h-cCCCCCCceEEEecchHHHHHHHHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeE
Confidence 5788888766554332 2 455 45565554443221 12345677888898877643 2457889999999999999
Q ss_pred EEEccchHHHHh
Q 012774 146 AFATSSVVHKLA 157 (456)
Q Consensus 146 vi~~~~~~~~~~ 157 (456)
+...+.....+.
T Consensus 269 ~~~~P~~l~~l~ 280 (542)
T PRK07786 269 IFLVPAQWQAVC 280 (542)
T ss_pred EEehHHHHHHHH
Confidence 999887776553
No 287
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=23.15 E-value=5.6e+02 Score=23.59 Aligned_cols=80 Identities=11% Similarity=0.033 Sum_probs=49.9
Q ss_pred ceecHHHHHHHHHHHHHHhHhhcC-CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEE
Q 012774 68 LRVSFSEFTRRTNSLASYLQNVTR-LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIA 146 (456)
Q Consensus 68 ~~~Ty~eL~~~~~~~a~~L~~~~g-i~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 146 (456)
-+-||+. ......+...+.+ | +.+|+.|. ....+-.-..+-+++.+.|..+..+-|...+......++..+++++
T Consensus 33 ptGS~K~-R~a~~~~~~a~~~--g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~ 108 (299)
T TIGR01136 33 PSGSVKD-RIALSMIEDAEKR--GLLKPGDTII-EATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELI 108 (299)
T ss_pred CCCCccH-HHHHHHHHHHHHc--CCCCCCCEEE-EeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEE
Confidence 3445554 2222233333333 5 36777664 5555555666666777789877766665555566678899999999
Q ss_pred EEccc
Q 012774 147 FATSS 151 (456)
Q Consensus 147 i~~~~ 151 (456)
+++..
T Consensus 109 ~~~~~ 113 (299)
T TIGR01136 109 LTPAE 113 (299)
T ss_pred EeCCC
Confidence 88754
No 288
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=22.98 E-value=4e+02 Score=21.32 Aligned_cols=44 Identities=14% Similarity=0.078 Sum_probs=36.5
Q ss_pred cHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEcc
Q 012774 107 EIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATS 150 (456)
Q Consensus 107 ~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 150 (456)
-..+....+-..|.-++-+..+.+++++.....+.+|++|..+.
T Consensus 19 G~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 19 GNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 34445556667899999999999999999999999999998763
No 289
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=22.96 E-value=5.7e+02 Score=23.10 Aligned_cols=72 Identities=18% Similarity=0.095 Sum_probs=49.8
Q ss_pred CCEEEEEcCCCCcHHHHHHHHHHhCCe---EecCCCCCCHHHHHHHhhhcCCeEEEEccc-----hHHHH---hccCCeE
Q 012774 95 NDTAFVLSTNSIEIPILYFSLLSLGVI---ISPANPVNTESEISRQIQLSNPVIAFATSS-----VVHKL---AKLKHRT 163 (456)
Q Consensus 95 gd~V~l~~~~~~~~~~~~la~~~~G~~---~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~-----~~~~~---~~~~~~~ 163 (456)
+.++.+-.-...+.+. .|.++|.. .+.+.+..+.+.-..++++.++.++++.++ ...++ .++++++
T Consensus 150 ~~~~~~RvLP~~~~l~---~~~~~G~~~~~iia~~gPfs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~v 226 (256)
T TIGR00715 150 EAVVFVRVLPYPQALA---QALKLGFPSDRIIAMRGPFSEELEKALLREYRIDAVVTKASGEQGGELEKVKAAEALGINV 226 (256)
T ss_pred CceEEEEECCCchhhH---HHHHcCCChhcEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcE
Confidence 4556555444444444 67777775 677777888888889999999999999654 23333 3668888
Q ss_pred EEEcCC
Q 012774 164 ILIDSP 169 (456)
Q Consensus 164 ~~~~~~ 169 (456)
+++.-+
T Consensus 227 ivI~RP 232 (256)
T TIGR00715 227 IRIARP 232 (256)
T ss_pred EEEeCC
Confidence 887633
No 290
>COG2351 Transthyretin-like protein [General function prediction only]
Probab=22.90 E-value=1.4e+02 Score=23.07 Aligned_cols=16 Identities=19% Similarity=0.507 Sum_probs=13.2
Q ss_pred CccccccCCcEEEEEc
Q 012774 362 GSTGRLSAGLEAKIVD 377 (456)
Q Consensus 362 ~~~G~~~~~~~~~i~d 377 (456)
-..|+|.+|++|.+..
T Consensus 18 ta~GkPAagv~V~L~r 33 (124)
T COG2351 18 TASGKPAAGVKVELYR 33 (124)
T ss_pred cccCCcCCCCEEEEEE
Confidence 4579999999988876
No 291
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=22.89 E-value=5.8e+02 Score=25.89 Aligned_cols=99 Identities=8% Similarity=0.077 Sum_probs=59.8
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCC---CcHHHHHHHHHHhCCeEecC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS---IEIPILYFSLLSLGVIISPA 125 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~---~~~~~~~la~~~~G~~~v~l 125 (456)
++++|++.. .+| -.+|...+...+......+. ..+..++.+.+..-.. ..+...+++.+..|...+..
T Consensus 206 ~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~ 283 (562)
T PRK05677 206 ADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMG--SNLNEGCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILI 283 (562)
T ss_pred ccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhc--cCCCCCccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEe
Confidence 577787643 222 35888888776655554442 2445555444432211 22333455666778766655
Q ss_pred CCCCCHHHHHHHhhhcCCeEEEEccchHHHH
Q 012774 126 NPVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (456)
Q Consensus 126 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 156 (456)
......+.+...++..++..+...+.....+
T Consensus 284 ~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 314 (562)
T PRK05677 284 SNPRDLPAMVKELGKWKFSGFVGLNTLFVAL 314 (562)
T ss_pred cCcccHHHHHHHHHHcCceEEecHHHHHHHH
Confidence 5556778888889999998888766655443
No 292
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=22.76 E-value=6.8e+02 Score=25.20 Aligned_cols=91 Identities=11% Similarity=0.157 Sum_probs=58.5
Q ss_pred CCCcEEEECC---CC----ceecHHHHHHHHHHHHHHhHhhcCCCCC-CEEEEEcCCC--CcHHHHHHHHHHhCCeEecC
Q 012774 56 DDTVALINSV---TG----LRVSFSEFTRRTNSLASYLQNVTRLSKN-DTAFVLSTNS--IEIPILYFSLLSLGVIISPA 125 (456)
Q Consensus 56 p~~~A~~~~~---~~----~~~Ty~eL~~~~~~~a~~L~~~~gi~~g-d~V~l~~~~~--~~~~~~~la~~~~G~~~v~l 125 (456)
++.+|++... +| ..+|++.+...+..+.. . .++.++ |++...+|-. ..+...+++.+..|+..+.+
T Consensus 151 ~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~---~-~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 226 (545)
T PRK07768 151 EDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFV---A-AEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKV 226 (545)
T ss_pred CCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHH---h-cCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEe
Confidence 5677765432 22 35999988765544332 2 566776 7877776544 34444566778889887776
Q ss_pred CCC---CCHHHHHHHhhhcCCeEEEEcc
Q 012774 126 NPV---NTESEISRQIQLSNPVIAFATS 150 (456)
Q Consensus 126 ~~~---~~~~~l~~~l~~~~~~~vi~~~ 150 (456)
.+. ..+..+..++++.++.++.+.+
T Consensus 227 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 254 (545)
T PRK07768 227 TPMDFLRDPLLWAELISKYRGTMTAAPN 254 (545)
T ss_pred CHHHHHHhHHHHHHHHHHhCCEEEECch
Confidence 542 2456677889999998765544
No 293
>smart00467 GS GS motif. Aa approx. 30 amino acid motif that precedes the kinase domain in types I and II TGF beta receptors. Mutation of two or more of the serines or threonines in the TTSGSGSG of TGF-beta type I receptor impairs phosphorylation and signaling activity.
Probab=22.54 E-value=40 Score=18.98 Aligned_cols=14 Identities=36% Similarity=0.290 Sum_probs=10.2
Q ss_pred CCCC-CCCCchhccc
Q 012774 200 SSGT-TGRVKGVMLT 213 (456)
Q Consensus 200 TSGt-TG~PK~V~~t 213 (456)
|||| +|.|-.|..+
T Consensus 11 tSGSGSG~p~LvqRT 25 (30)
T smart00467 11 TSGSGSGLPLLVQRT 25 (30)
T ss_pred cCCCCCCchhHHHHH
Confidence 7887 6888777654
No 294
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=22.45 E-value=7.2e+02 Score=25.21 Aligned_cols=100 Identities=7% Similarity=0.066 Sum_probs=60.6
Q ss_pred CCCcEEEEC---CCC----ceecHHHHHHHHHHHHHHhHhhcC------CCCCCEEEEEcCCC---CcHHHHHHHHHHhC
Q 012774 56 DDTVALINS---VTG----LRVSFSEFTRRTNSLASYLQNVTR------LSKNDTAFVLSTNS---IEIPILYFSLLSLG 119 (456)
Q Consensus 56 p~~~A~~~~---~~~----~~~Ty~eL~~~~~~~a~~L~~~~g------i~~gd~V~l~~~~~---~~~~~~~la~~~~G 119 (456)
++.+|++.. .+| -.+|++.+...+..+...+.. .+ +..++.+.+..-.- ..+....+.++..|
T Consensus 206 ~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g 284 (562)
T PRK12492 206 LDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQ-LGPDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSG 284 (562)
T ss_pred cCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhc-ccccccccccCCCeEEEEecchHHHHHHHHHHHHHhhcC
Confidence 356676543 222 358999988888777776653 33 45566554432211 12223344556677
Q ss_pred CeEecCCCCCCHHHHHHHhhhcCCeEEEEccchHHHH
Q 012774 120 VIISPANPVNTESEISRQIQLSNPVIAFATSSVVHKL 156 (456)
Q Consensus 120 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 156 (456)
...+......+...+...++..++.+++..+.....+
T Consensus 285 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 321 (562)
T PRK12492 285 NHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVAL 321 (562)
T ss_pred ceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHH
Confidence 7655554445677777888889998888777666544
No 295
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=22.35 E-value=3.7e+02 Score=20.78 Aligned_cols=83 Identities=12% Similarity=-0.020 Sum_probs=47.3
Q ss_pred hhHhhHHHHHHHhH-hcceEEEec-CCCHHHHHHHHHHhcceeEEecHH------HHHHHhcCCCCCCCCCCCceEEEec
Q 012774 244 FHIYGLFFCFRAAA-LMETAVVMQ-RFDLKMMLKAVEEFRVTHAAVTPP------IVVAMSKGGSTDGYDLSSLETVACG 315 (456)
Q Consensus 244 ~~~~g~~~~~~~l~-~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~------~~~~l~~~~~~~~~~l~~lr~v~~g 315 (456)
.|..|...+...+. .|-.++... ...++.+.+.+.+.+++++...-. .+..+++..+... ...+ .++.|
T Consensus 11 ~H~lG~~~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~--~~~i-~i~~G 87 (122)
T cd02071 11 GHDRGAKVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELG--AGDI-LVVGG 87 (122)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcC--CCCC-EEEEE
Confidence 57777744444444 444455544 457899999999999998866532 1222222222221 2233 35666
Q ss_pred CCCCCHHHHHHHHHh
Q 012774 316 AAPLGKDTIMAFASK 330 (456)
Q Consensus 316 G~~~~~~~~~~~~~~ 330 (456)
|.. +++..+++++.
T Consensus 88 G~~-~~~~~~~~~~~ 101 (122)
T cd02071 88 GII-PPEDYELLKEM 101 (122)
T ss_pred CCC-CHHHHHHHHHC
Confidence 654 45666777665
No 296
>PF08789 PBCV_basic_adap: PBCV-specific basic adaptor domain; InterPro: IPR014897 The small PBCV-specific basic adaptor protein is found fused to S/T protein kinases and the 2-Cysteine domain [].
Probab=22.32 E-value=82 Score=19.10 Aligned_cols=29 Identities=14% Similarity=0.080 Sum_probs=17.5
Q ss_pred EEEccCCcEEEecccc-cceeeC-CeeecCC
Q 012774 426 CYIDEDGFLFIVDRLK-DLIKYK-GYQVLPL 454 (456)
Q Consensus 426 ~~~~~dg~l~~~GR~~-d~ik~~-G~~v~p~ 454 (456)
|..|..|+..|.|-.. ..++-+ |.+|++.
T Consensus 2 GkvdakgR~i~~g~rGg~yV~~~~GKKvyvk 32 (40)
T PF08789_consen 2 GKVDAKGRKIFKGPRGGTYVISDGGKKVYVK 32 (40)
T ss_pred CcccCcCCEEEECCCCCEEEeCCCCcEEeeE
Confidence 3456677777777433 333333 6888875
No 297
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=22.23 E-value=4.9e+02 Score=24.67 Aligned_cols=101 Identities=12% Similarity=0.100 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCC---------CCHHHHHHHhhhcC
Q 012774 72 FSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPV---------NTESEISRQIQLSN 142 (456)
Q Consensus 72 y~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~---------~~~~~l~~~l~~~~ 142 (456)
=.++......++..|.+ . +| |.|. +..+..+.+++.+|+.+.++.++=+.-. .+.+..++.+....
T Consensus 49 ~~~~~~~~~~~~~~~~~-~--~P-d~Vl-v~GD~~~~la~alaA~~~~ipv~HieaGlRs~d~~~g~~de~~R~~i~~la 123 (346)
T PF02350_consen 49 AKSTGLAIIELADVLER-E--KP-DAVL-VLGDRNEALAAALAAFYLNIPVAHIEAGLRSGDRTEGMPDEINRHAIDKLA 123 (346)
T ss_dssp HHHHHHHHHHHHHHHHH-H--T--SEEE-EETTSHHHHHHHHHHHHTT-EEEEES-----S-TTSSTTHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHh-c--CC-CEEE-EEcCCchHHHHHHHHHHhCCCEEEecCCCCccccCCCCchhhhhhhhhhhh
Confidence 36677778888888887 2 34 6555 5566888889899999999998877644 66777888887776
Q ss_pred CeEEEEccchHHHHhccC---CeEEEEcCCchhhhhcc
Q 012774 143 PVIAFATSSVVHKLAKLK---HRTILIDSPEFDSMTMS 177 (456)
Q Consensus 143 ~~~vi~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 177 (456)
--.+...+.....+.+.+ .++++++.+.++.+...
T Consensus 124 ~lhf~~t~~~~~~L~~~G~~~~rI~~vG~~~~D~l~~~ 161 (346)
T PF02350_consen 124 HLHFAPTEEARERLLQEGEPPERIFVVGNPGIDALLQN 161 (346)
T ss_dssp SEEEESSHHHHHHHHHTT--GGGEEE---HHHHHHHHH
T ss_pred hhhccCCHHHHHHHHhcCCCCCeEEEEChHHHHHHHHh
Confidence 555555555566665443 46777777766666443
No 298
>COG1663 LpxK Tetraacyldisaccharide-1-P 4'-kinase [Cell envelope biogenesis, outer membrane]
Probab=21.92 E-value=6.8e+02 Score=23.65 Aligned_cols=155 Identities=11% Similarity=0.000 Sum_probs=73.3
Q ss_pred HHHHHHhh-hcCCeEEEEccchHHHHhccCCeEEEEcCCch---hhhhcccCCCccccccCCCCCCEEEEEcCC-CCCCC
Q 012774 132 SEISRQIQ-LSNPVIAFATSSVVHKLAKLKHRTILIDSPEF---DSMTMSWNSKHELDRAKVCQSDVAAIMYSS-GTTGR 206 (456)
Q Consensus 132 ~~l~~~l~-~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~a~i~~TS-GtTG~ 206 (456)
+....+++ +.++++||+|+.+.+.-...+..+++++...- ..+...+.-- + +. ...++.-+++.-+ ++...
T Consensus 130 ~~~~~l~~~~~~~diIi~DDG~Qh~rL~rD~eIvvvd~~r~fGng~~lPaGpLR-e--p~-~rl~~ad~ii~~g~~~~~~ 205 (336)
T COG1663 130 DAAKALLAAHLGCDIIVLDDGLQHYRLHRDFEIVVVDGQRGFGNGFLLPAGPLR-E--PP-KRLKSADAIITNGGGSRAD 205 (336)
T ss_pred HHHHHHHhhCCCCCEEEEcCcchhhHhhcceeEEEEeccccCCCcccccCCccc-C--Ch-hhhhcCcEEEecCCCcccc
Confidence 44555555 37899999999988776666677777775432 1111111100 1 11 1122222333333 34444
Q ss_pred CchhcccHHHHHHHHHHhccCCCCCCCCcEEEEecchhhHhhHHHHHHHhHhcc----eEEEec--CCCHHHHHHHHHHh
Q 012774 207 VKGVMLTHRNLTAAVASSFASSPKRVSPAVMLFTMPYFHIYGLFFCFRAAALME----TAVVMQ--RFDLKMMLKAVEEF 280 (456)
Q Consensus 207 PK~V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~----~~~~~~--~~~~~~~~~~i~~~ 280 (456)
|....+.+...................+.+++...-+.|...++..+-. .|. +..+++ .++.+++.....+.
T Consensus 206 ~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~v~afaGIg~P~rFf~tL~~--~g~~~~~~~~FpDH~~f~~~~l~~l~~~~ 283 (336)
T COG1663 206 PIPMRLAPGHAPNLVAPGERSDVADLKGKRVVAFAGIGNPQRFFATLRN--LGIQVVETLAFPDHYDFSAADLEDLAKKA 283 (336)
T ss_pred chhhhhcccccceeeccceecchhhcCCceEEEEEecCChHHHHHHHHH--cCcceeeeecCCchhhccHHHHHHHHhhh
Confidence 4322222221111111011111012233556666677776666544433 242 233332 35677777777766
Q ss_pred cceeEEecHHHH
Q 012774 281 RVTHAAVTPPIV 292 (456)
Q Consensus 281 ~~t~~~~~P~~~ 292 (456)
+...+.+|..=+
T Consensus 284 ~~~~Ll~TeKDa 295 (336)
T COG1663 284 QADGLLTTEKDA 295 (336)
T ss_pred ccceEEeeccce
Confidence 665566664433
No 299
>PLN00011 cysteine synthase
Probab=21.75 E-value=6.4e+02 Score=23.61 Aligned_cols=59 Identities=12% Similarity=-0.028 Sum_probs=43.2
Q ss_pred CCCC-CEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEEccc
Q 012774 92 LSKN-DTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFATSS 151 (456)
Q Consensus 92 i~~g-d~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 151 (456)
+.+| +.|. ....+-.-..+-+++...|..+..+-|...+......++..+++++++++.
T Consensus 65 ~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 65 ITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred CCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 6677 5554 455666666677788888997777666555567788899999999998753
No 300
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=21.59 E-value=2.4e+02 Score=24.03 Aligned_cols=22 Identities=14% Similarity=0.184 Sum_probs=19.8
Q ss_pred ceecHHHHHHHHHHHHHHhHhh
Q 012774 68 LRVSFSEFTRRTNSLASYLQNV 89 (456)
Q Consensus 68 ~~~Ty~eL~~~~~~~a~~L~~~ 89 (456)
.-+||.|+.+++.++|..+.+.
T Consensus 10 ~lis~~~I~~~i~~lA~~I~~~ 31 (189)
T PLN02238 10 VLWTAEDISARVAELAAQIASD 31 (189)
T ss_pred EEcCHHHHHHHHHHHHHHHHHH
Confidence 3689999999999999999883
No 301
>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional
Probab=21.59 E-value=3e+02 Score=23.21 Aligned_cols=41 Identities=12% Similarity=0.093 Sum_probs=26.6
Q ss_pred eecHHHHHHHHHHHHHHhHhhcCCCCC-CEEEEEcCCCCcHHH
Q 012774 69 RVSFSEFTRRTNSLASYLQNVTRLSKN-DTAFVLSTNSIEIPI 110 (456)
Q Consensus 69 ~~Ty~eL~~~~~~~a~~L~~~~gi~~g-d~V~l~~~~~~~~~~ 110 (456)
-+|.+|+.+++.++|..+.+.+. ..+ +.|.+...++-..++
T Consensus 8 l~~~~~i~~~i~~lA~~I~~~~~-~~~~~~vvvgI~~Gg~~fa 49 (178)
T PRK15423 8 MIPEAEIKARIAELGRQITERYK-DSGSDMVLVGLLRGSFMFM 49 (178)
T ss_pred ecCHHHHHHHHHHHHHHHHHHhc-ccCCCeEEEEEecCChHHH
Confidence 47899999999999999988332 113 344444444433333
No 302
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=21.32 E-value=4.6e+02 Score=26.55 Aligned_cols=83 Identities=10% Similarity=-0.062 Sum_probs=58.9
Q ss_pred hcccHHHHHHHHHHhccCC--CCCCCCcEEEEecchhhHhhHHHHHHHhHhcceEEEec-CCCHHHHHHHHHHhcceeEE
Q 012774 210 VMLTHRNLTAAVASSFASS--PKRVSPAVMLFTMPYFHIYGLFFCFRAAALMETAVVMQ-RFDLKMMLKAVEEFRVTHAA 286 (456)
Q Consensus 210 V~~th~~l~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 286 (456)
..+|...+...+..+...+ .+..+++++...++-.. ......++.+..|+..+... ....+.+...+++.+++.++
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~-~~~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi 125 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVL-QYPVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIV 125 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCH-HHHHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEE
Confidence 3578888865554444333 15678888888877543 23456688888999888764 56788999999999999988
Q ss_pred ecHHHHH
Q 012774 287 VTPPIVV 293 (456)
Q Consensus 287 ~~P~~~~ 293 (456)
.......
T Consensus 126 ~~~~~~~ 132 (557)
T PRK07059 126 VLENFAT 132 (557)
T ss_pred EchhhHH
Confidence 7665443
No 303
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=21.27 E-value=4.5e+02 Score=26.08 Aligned_cols=68 Identities=12% Similarity=0.011 Sum_probs=45.3
Q ss_pred ceecHHHHHHHHHHH--------------H-HHhHhhcCCCCCCEEEEEcCCCCcHHHHHHH-HHHhCCeEecC--C---
Q 012774 68 LRVSFSEFTRRTNSL--------------A-SYLQNVTRLSKNDTAFVLSTNSIEIPILYFS-LLSLGVIISPA--N--- 126 (456)
Q Consensus 68 ~~~Ty~eL~~~~~~~--------------a-~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la-~~~~G~~~v~l--~--- 126 (456)
..-||.+|.+.+..+ | +.|.. .++++||.| .+..++....+ +...|++++-+ +
T Consensus 69 g~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~-l~l~pGDeV-----psn~~f~Tt~ahIe~~Gav~vDi~~dea~ 142 (450)
T TIGR02618 69 GSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQ-IAIKPGDYV-----PGNMYFTTTRYHQEKNGATFVDIIIDEAH 142 (450)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHH-hCCCCcCEE-----CCceeHHHHHHHHHhCCeEEEeeeccccc
Confidence 344777777775433 2 23333 789999976 34666666666 68888877666 2
Q ss_pred ---------CCCCHHHHHHHhhhc
Q 012774 127 ---------PVNTESEISRQIQLS 141 (456)
Q Consensus 127 ---------~~~~~~~l~~~l~~~ 141 (456)
-+.+.+.++..++..
T Consensus 143 ~~~~~~p~~GniD~~~Le~aI~~~ 166 (450)
T TIGR02618 143 DAQLNIPFKGNVDLKKLQKLIDEV 166 (450)
T ss_pred ccccCCCCCCCcCHHHHHHHhccc
Confidence 234788999988753
No 304
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=21.19 E-value=2.8e+02 Score=23.03 Aligned_cols=20 Identities=15% Similarity=0.195 Sum_probs=18.6
Q ss_pred ecHHHHHHHHHHHHHHhHhh
Q 012774 70 VSFSEFTRRTNSLASYLQNV 89 (456)
Q Consensus 70 ~Ty~eL~~~~~~~a~~L~~~ 89 (456)
+||.|+.+.++++|..+.+.
T Consensus 3 is~~~i~~~i~~lA~~I~~~ 22 (166)
T TIGR01203 3 IPEEQIKARIAELAKQITED 22 (166)
T ss_pred cCHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999883
No 305
>PRK05939 hypothetical protein; Provisional
Probab=20.99 E-value=4.6e+02 Score=25.49 Aligned_cols=55 Identities=18% Similarity=0.186 Sum_probs=30.4
Q ss_pred CCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHHhhhcCCeEEEE
Q 012774 92 LSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQIQLSNPVIAFA 148 (456)
Q Consensus 92 i~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 148 (456)
+++||.|.+.-..-......+-.+.+.|+.+..++.. +.+.++..+.. +.++|++
T Consensus 83 l~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~-d~e~l~~~l~~-~tklV~v 137 (397)
T PRK05939 83 LRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT-DVQNVAAAIRP-NTRMVFV 137 (397)
T ss_pred cCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC-CHHHHHHhCCC-CCeEEEE
Confidence 5678877664322222223333445668777766653 55667766643 4566655
No 306
>PF10794 DUF2606: Protein of unknown function (DUF2606); InterPro: IPR019730 This entry represents bacterial proteins with unknown function.
Probab=20.90 E-value=4.1e+02 Score=20.66 Aligned_cols=33 Identities=15% Similarity=0.214 Sum_probs=25.4
Q ss_pred cccccCCcEEEEEcCCCCCCCCCCCcceEEEec
Q 012774 364 TGRLSAGLEAKIVDPETGDSLPPGKEGELSIRG 396 (456)
Q Consensus 364 ~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~i~g 396 (456)
-|.|+.++++.+....+..+.|.-++||+.=+.
T Consensus 52 e~~pi~~~ev~lmKa~ds~~qPs~eig~~IGKT 84 (131)
T PF10794_consen 52 EGQPIKDFEVTLMKAADSDPQPSKEIGISIGKT 84 (131)
T ss_pred CCCcccceEEEEEeccccCCCCchhhceeeccc
Confidence 478999999999985566677777888886543
No 307
>PTZ00397 macrophage migration inhibition factor-like protein; Provisional
Probab=20.75 E-value=2.5e+02 Score=21.55 Aligned_cols=37 Identities=11% Similarity=0.095 Sum_probs=28.2
Q ss_pred eecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCC
Q 012774 69 RVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNS 105 (456)
Q Consensus 69 ~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~ 105 (456)
..+-++-.+.+.+++..|.+.+|+.+++....+.+..
T Consensus 68 ~~~~e~k~~l~~~i~~~l~~~lgi~~~rv~I~f~~~~ 104 (116)
T PTZ00397 68 GISRSNNSSIAAAITKILASHLKVKSERVYIEFKDCS 104 (116)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhCcCcccEEEEEEECC
Confidence 3567888889999999999999998776555554443
No 308
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=20.43 E-value=96 Score=20.41 Aligned_cols=19 Identities=42% Similarity=0.777 Sum_probs=13.5
Q ss_pred ccceEEEccCCcEEEeccc
Q 012774 422 TGDLCYIDEDGFLFIVDRL 440 (456)
Q Consensus 422 TGDl~~~~~dg~l~~~GR~ 440 (456)
-|.+.+.++||.+.|.|+.
T Consensus 32 ~~~i~Y~~~dg~yli~G~l 50 (57)
T PF10411_consen 32 GGGILYVDEDGRYLIQGQL 50 (57)
T ss_dssp TTEEEEEETTSSEEEES-E
T ss_pred CCeEEEEcCCCCEEEEeEE
Confidence 4567788888888887764
No 309
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=20.30 E-value=5.4e+02 Score=23.56 Aligned_cols=81 Identities=15% Similarity=0.197 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCC--CCCCHH---HHHHHhhhcCCeEE
Q 012774 72 FSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPAN--PVNTES---EISRQIQLSNPVIA 146 (456)
Q Consensus 72 y~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~--~~~~~~---~l~~~l~~~~~~~v 146 (456)
++++.++.+.+-..+.++.. ....+..+...+...++.-.+++-..+.. -+. ...++. ++...++..++++|
T Consensus 156 ~~~~~~~L~~l~~~~~~~~~-~~~~~~~v~~H~af~Yl~~~~gl~~~~~~--~~~~~~eps~~~l~~l~~~ik~~~v~~I 232 (286)
T cd01019 156 LEAFNARLAELDATIKERLA-PVKTKPFFVFHDAYGYFEKRYGLTQAGVF--TIDPEIDPGAKRLAKIRKEIKEKGATCV 232 (286)
T ss_pred HHHHHHHHHHHHHHHHHHhh-ccCCCeEEEecccHHHHHHHcCCceeeee--cCCCCCCCCHHHHHHHHHHHHHcCCcEE
Confidence 55566666666665555222 12355666677777777776665433321 122 233455 45556678889999
Q ss_pred EEccchHHH
Q 012774 147 FATSSVVHK 155 (456)
Q Consensus 147 i~~~~~~~~ 155 (456)
|+++....+
T Consensus 233 f~e~~~~~~ 241 (286)
T cd01019 233 FAEPQFHPK 241 (286)
T ss_pred EecCCCChH
Confidence 998765544
No 310
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=20.23 E-value=3.6e+02 Score=26.15 Aligned_cols=94 Identities=11% Similarity=0.047 Sum_probs=64.6
Q ss_pred CCHHHHhhhcccCCCCCCCCCcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHH
Q 012774 38 ISAVDYVSSLRATLPWRDDDTVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLS 117 (456)
Q Consensus 38 ~~~~~~l~~~~~~~~~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~ 117 (456)
...++++.+.++.. .+.++.... .+.+-+-||.+...+.-+.+.. .-+.+.+-|.+-....-.++.+++|..-
T Consensus 43 ~~~P~fv~ea~~~~----~~~~~~~qY--t~~~G~p~L~~aL~k~~se~~~-~~~~~~~eVlVT~GA~~ai~~~~~~l~~ 115 (420)
T KOG0257|consen 43 FPPPKFVTEAAKNA----AKEPSTNQY--TRGYGLPQLRKALAKAYSEFYG-GLLDPDDEVLVTAGANEAISSALLGLLN 115 (420)
T ss_pred CCCcHHHHHHHHHH----hccchhccc--cccCCchHHHHHHHHHHHHHhc-cccCCcccEEEecCchHHHHHHHHHHcC
Confidence 45567777776666 444444433 5667778888776666666555 3345666688887777778889999999
Q ss_pred hCCeEecCCCCCCHHHHHHHh
Q 012774 118 LGVIISPANPVNTESEISRQI 138 (456)
Q Consensus 118 ~G~~~v~l~~~~~~~~l~~~l 138 (456)
.|-.++.+.|.++.-.-.-.+
T Consensus 116 ~GDeVii~eP~fd~Y~~~~~m 136 (420)
T KOG0257|consen 116 PGDEVIVFEPFFDCYIPQVVM 136 (420)
T ss_pred CCCEEEEecCcchhhhhHHhh
Confidence 999999999988764433333
No 311
>PF08515 TGF_beta_GS: Transforming growth factor beta type I GS-motif; InterPro: IPR003605 Transforming growth factor beta (TGF-beta) is a member of a large family of secreted growth factors of central importance in eukaryotic development and homeostasis. Members of this family, which includes the activins, inhibins and bone morphogenic proteins (BMPs), bind to receptors that consist of two transmembrane serine/threonine (Ser/Thr) kinases called the type I and type II receptors. Type II activates Type I upon formation of the ligand receptor complex by multiply phosphorylating the GS domain, a short (~30 residues), highly conserved regulatory sequence just N-terminal to the kinase domain on the cytoplasmic side of the receptor. The GS domain is found only in the type I receptor family and is named for the TTSGSGSG sequence at its core. At least three, and perhaps four to five of the serines and threonines in the GS domain, must be phosphorylated to fully activate TbetaR-1 []. The GS domain forms a helix-loop-helix structure in which the sites of activating phosphorylation are situated in a loop known as the GS loop. One key role for phosphorylation is to block the adoption of an inactivating configuration by the GS domain [].; GO: 0004675 transmembrane receptor protein serine/threonine kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation, 0016020 membrane; PDB: 3MY0_H 3Q4U_B 3H9R_A 3MTF_B 3OOM_A 3KCF_C 3FAA_A 1IAS_A 1PY5_A 2X7O_C ....
Probab=20.22 E-value=47 Score=18.47 Aligned_cols=14 Identities=36% Similarity=0.290 Sum_probs=9.0
Q ss_pred CCCC-CCCCchhccc
Q 012774 200 SSGT-TGRVKGVMLT 213 (456)
Q Consensus 200 TSGt-TG~PK~V~~t 213 (456)
|||| +|.|-.|.+|
T Consensus 12 tSGSGSGlplLvQRT 26 (29)
T PF08515_consen 12 TSGSGSGLPLLVQRT 26 (29)
T ss_dssp CCTSSSSS-HHHHHH
T ss_pred cCCCCCCchhhhhhh
Confidence 6776 4888877654
No 312
>PRK06381 threonine synthase; Validated
Probab=20.11 E-value=3.7e+02 Score=25.07 Aligned_cols=88 Identities=6% Similarity=-0.063 Sum_probs=53.1
Q ss_pred CcEEEECCCCceecHHHHHHHHHHHHHHhHhhcCCCCCCEEEEEcCCCCcHHHHHHHHHHhCCeEecCCCCCCHHHHHHH
Q 012774 58 TVALINSVTGLRVSFSEFTRRTNSLASYLQNVTRLSKNDTAFVLSTNSIEIPILYFSLLSLGVIISPANPVNTESEISRQ 137 (456)
Q Consensus 58 ~~A~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~~gi~~gd~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~ 137 (456)
++.+-....+-+=||++-. +..+...+.+ .|. +.| +.+..+-.-..+-++|...|..+..+-|...+......
T Consensus 32 ~i~~K~E~~nptGS~K~R~--a~~~l~~a~~-~g~---~~l-v~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~ 104 (319)
T PRK06381 32 KIYLKFEGANPTGTQKDRI--AEAHVRRAMR-LGY---SGI-TVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKE 104 (319)
T ss_pred eEEEEecCCCCccCcHHHH--HHHHHHHHHH-cCC---CEE-EEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHH
Confidence 4555555444455555522 2222222333 342 344 44556666677777888889877665555555556678
Q ss_pred hhhcCCeEEEEccch
Q 012774 138 IQLSNPVIAFATSSV 152 (456)
Q Consensus 138 l~~~~~~~vi~~~~~ 152 (456)
++..+++++++....
T Consensus 105 l~~~GA~V~~~~~~~ 119 (319)
T PRK06381 105 MEKYGAEIIYVDGKY 119 (319)
T ss_pred HHHcCCEEEEcCCCH
Confidence 999999999998653
Done!