Query 012776
Match_columns 456
No_of_seqs 256 out of 1028
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 06:11:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012776.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012776hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1737 Oxysterol-binding prot 100.0 7E-102 2E-106 838.3 30.1 419 8-434 372-795 (799)
2 KOG2209 Oxysterol-binding prot 100.0 4E-103 9E-108 760.1 17.4 356 65-425 40-436 (445)
3 PF01237 Oxysterol_BP: Oxyster 100.0 6E-102 1E-106 794.7 26.0 350 68-425 1-354 (354)
4 KOG2210 Oxysterol-binding prot 100.0 5.2E-73 1.1E-77 575.4 23.3 327 63-423 31-377 (392)
5 PF02084 Bindin: Bindin; Inte 45.0 48 0.001 32.3 5.5 51 69-125 105-155 (238)
6 KOG3205 Rho GDP-dissociation i 40.7 1.4E+02 0.0029 28.6 7.6 109 159-293 70-192 (200)
7 KOG1693 emp24/gp25L/p24 family 32.4 4.7E+02 0.01 25.3 11.0 120 251-391 42-164 (209)
8 PF10504 DUF2452: Protein of u 29.4 1.5E+02 0.0032 27.5 5.9 86 78-165 14-109 (159)
9 PF14254 DUF4348: Domain of un 25.5 86 0.0019 31.5 3.9 42 223-264 224-266 (273)
10 PF14038 YqzE: YqzE-like prote 24.5 36 0.00079 25.8 0.9 17 384-400 28-44 (54)
11 PF12915 DUF3833: Protein of u 21.5 2.7E+02 0.0059 26.0 6.2 58 259-324 22-88 (164)
12 COG2154 Pterin-4a-carbinolamin 20.6 32 0.00069 29.5 -0.1 19 160-178 48-66 (101)
No 1
>KOG1737 consensus Oxysterol-binding protein [Lipid transport and metabolism]
Probab=100.00 E-value=7.1e-102 Score=838.27 Aligned_cols=419 Identities=41% Similarity=0.654 Sum_probs=384.3
Q ss_pred CCCcceeeecccccccccccccccccccCCCCCcccCCCC-CCcchhhhhhhcccccccchhHHHHHHhccCcccCCCcc
Q 012776 8 QGGGFFASIAAGWSTFGSAMSKSVNGLLGYEGLEVVNPEG-STEDAEDEARRGRWKQEERDNYWKMMQKYIGADVQSLVT 86 (456)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~g~~~~e~~~siw~~lk~~IG~DLts~vs 86 (456)
.+.+++.+.+|+++..+.++..++++..........+++. +.++...+......+.+.+.++|++||++||+||| +|+
T Consensus 372 ~~s~~~~s~~s~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~rr~~lp~~~~~~~~islw~~~k~~iGkDls-kv~ 450 (799)
T KOG1737|consen 372 EGSEDEESYTSDISDNGSSDALSADGDKSSQALNEKVPSGSGAEVARRTNLPAPSKPSSSISLWSILRNNIGKDLS-KVS 450 (799)
T ss_pred cccccccccccccccCCCccccccccccccccccccccccccccccccccCCCCcCcCCCccHHHHHhhccccccc-ccc
Confidence 3456888999988888888888888877776666666665 22222222222323466778999999999999998 599
Q ss_pred cCcccccccchHHHhhhccccHHHHhhhhcCCChHHHHHHHHHHHhhhhh-hccccCCCCCCCCCCeEEEEecC-cEEEE
Q 012776 87 LPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYF-AYRRAWKPFNPVLGETFEMVNHG-GVTFI 164 (456)
Q Consensus 87 lPv~i~EP~S~LQr~ae~~ey~~lL~~Aa~~~dp~eRm~~V~af~iS~~~-~~~r~~KPfNPILGETfe~~~~~-g~~fi 164 (456)
|||.||||+|+|||++|+|||++||++|++++||++||++|+||++|+|. ..+|.+|||||||||||||.+.+ |+|||
T Consensus 451 ~PV~~nEP~S~LQr~~EdlEYs~LLd~A~~~~d~~~R~~~vaafavS~Ya~t~~r~~KPFNPlLgETyE~~r~dkg~rf~ 530 (799)
T KOG1737|consen 451 MPVEFNEPLSLLQRVAEDLEYSELLDKAANYEDPLERMVYVAAFAVSSYSSTSRRTAKPFNPLLGETYEMDRPDKGLRFF 530 (799)
T ss_pred cceecCCcchHHHHhhhhccchhhhHHHHhcCCcHHHHHHHHHHHhhhcchhcccccCCCCcccccceEeeccCCceeee
Confidence 99999999999999999999999999999999999999999999999994 46799999999999999999854 89999
Q ss_pred eeecccCCcceEEEEeCceEEEEEeeeeeeeEEeeEEEEEEeeEEEEEEcCCcEEEEEeCCCceeeeeeccceeEecCCc
Q 012776 165 AEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGD 244 (456)
Q Consensus 165 aEQVSHHPPISAf~~e~~~~~~~~~~~~kskF~G~Sv~v~~~G~~~l~l~~~ge~Y~~~~P~~~v~nii~G~~~ve~~G~ 244 (456)
+|||||||||+|+|||+++|.|++++.+++||||+||+|.|+|..+|+|+.+|++|+|.+|++.|+|||+|++|+|++|+
T Consensus 531 sEqVSHhPPi~A~h~es~~w~~~~ds~~~sKF~Gksi~v~P~G~l~l~~~~~G~~~~w~kvtt~v~nii~Gk~~~D~~ge 610 (799)
T KOG1737|consen 531 SEQVSHHPPISACHAESNNWTFWGDSKVKSKFWGKSIEVPPLGILHVTLKNIGEHYSWAKVTTTVHNIILGKLWVDHYGE 610 (799)
T ss_pred eeeeccCCCcccccccCCCceeeccccccccccccceeecCCceEEEEEcCCCccccccCccceecceeecccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCC-CEEEEEEeeCccccCceeEEEEEEECCCCCceEEEeeeecceeeeeeCCCCCCcCCCCCceEEEeeccCC
Q 012776 245 MVMTNLTTG-DKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAP 323 (456)
Q Consensus 245 ~~I~~~~tg-~~a~i~F~~~~~~g~~~~~V~G~V~~~~g~~~~~i~G~W~~~l~~~~~~~~g~~l~~~~~~~lW~~~~~p 323 (456)
|.|++++++ ++|.|+|++.+||+.+.++|.|.|++.+|++++++.|+|++.|++..++..|.+.+.+..+++|++++.|
T Consensus 611 ~~i~n~~~~~~~c~L~F~~~~~~~~~~~ev~g~V~~~s~~~~~~l~GkW~e~~~~~~~~~~~~~~~~~~~~~iWk~~~~P 690 (799)
T KOG1737|consen 611 MEITNHTTGSDKCKLKFVKAGYFSRNAREVEGSVRNKSGKKVEVLTGKWDESLYYFKVDKVGLPEPETSEKLIWKANDLP 690 (799)
T ss_pred EEEecCCCCcceeEEEEeeecccCCCcceeEEEEeCCCCceeEEEeeeehhhhhhccccccccccCCccceeeeecCCCC
Confidence 999999999 7999999999999999999999999999999999999999999999999888888888899999999999
Q ss_pred CCCccccceeecccCCCCCCC-CcCCCCCcccchhhHHHHcCCchhhHHHHHHHHHHHHHHHHHHHhcCCCceecceeec
Q 012776 324 EDDKYQYTYFTHKLNSFDTAP-KKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLS 402 (456)
Q Consensus 324 ~~~~~~ft~fa~~lN~~~~~~-~~l~PtDSR~R~D~~aLe~Gd~~~A~~eK~~LEe~QR~~rk~R~~~~~~w~Pr~F~~~ 402 (456)
++.+|+||.||++||++++.+ +.|+|||||+|||+|+||+|+|++|..||.+|||+||++|+.|++.+.+|+||||.+.
T Consensus 691 kn~~y~ft~fai~LNel~p~l~~~lpPTDSRlRPDqr~lE~G~~~~a~~EK~rlEe~QR~~r~~re~~~~~~~prwF~~~ 770 (799)
T KOG1737|consen 691 KNNKYNFTGFAIELNELTPHLKKLLPPTDSRLRPDQRALENGEYDEANAEKLRLEEKQRARRRKREENGEEYEPRWFEKV 770 (799)
T ss_pred CCcccccchhheecccCCchhhccCCCCCcccCcchhhhhccChhhhhhhhHhHHHHHHHHHHHHHhhcccccccccccc
Confidence 999999999999999999855 5677899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcceEEEcCcchhccccCCCCCC
Q 012776 403 DEVTPTPWGDLEVYRYNGKYSELRATLDNSES 434 (456)
Q Consensus 403 ~d~~~~~~~~~~~~~y~g~Yw~~r~~~~~~~~ 434 (456)
.++.+ .|+|+|+||++|++.+|..+
T Consensus 771 ~~~~~-------~~~~ng~Ywe~r~~~d~~~~ 795 (799)
T KOG1737|consen 771 KDPST-------YWVYNGGYWEAREKQDWKDC 795 (799)
T ss_pred CCCcc-------eEEecCchheeecccCcccc
Confidence 87642 79999999999999999865
No 2
>KOG2209 consensus Oxysterol-binding protein [Signal transduction mechanisms]
Probab=100.00 E-value=4e-103 Score=760.13 Aligned_cols=356 Identities=36% Similarity=0.670 Sum_probs=326.6
Q ss_pred cchhHHHHHHhccCcccCCCcccCcccccccchHHHhhhccccHHHHhhhhcCCChHHHHHHHHHHHhhhhhh-ccccCC
Q 012776 65 ERDNYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFA-YRRAWK 143 (456)
Q Consensus 65 ~~~siw~~lk~~IG~DLts~vslPv~i~EP~S~LQr~ae~~ey~~lL~~Aa~~~dp~eRm~~V~af~iS~~~~-~~r~~K 143 (456)
+..|||+||++|||+||+ +|+|||+||||+|||||++|+|+|..||.+|+.++||+|||.+|+||++|+..+ -.|..|
T Consensus 40 ~d~SIW~Ilr~ciGkelS-kiTmPV~~NEPLSFLQRltEyme~~yLi~kAs~~~~p~eRmqyVAAFAvsavas~weR~gK 118 (445)
T KOG2209|consen 40 NDFSIWSILRKCIGKELS-KITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSQSDPVERMQYVAAFAVSAVASQWERTGK 118 (445)
T ss_pred ccccHHHHHHhhhchhhh-heeeeeeeCCcHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHhHHHhcC
Confidence 447999999999999995 699999999999999999999999999999999999999999999999999976 458999
Q ss_pred CCCCCCCCeEEEEecC-cEEEEeeecccCCcceEEEEe--CceEEEEEeeeeeeeEEeeEEEEEEeeEEEEEEcCCcEEE
Q 012776 144 PFNPVLGETFEMVNHG-GVTFIAEQVSHHPPMSAGHAE--NEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVL 220 (456)
Q Consensus 144 PfNPILGETfe~~~~~-g~~fiaEQVSHHPPISAf~~e--~~~~~~~~~~~~kskF~G~Sv~v~~~G~~~l~l~~~ge~Y 220 (456)
||||||||||++.+.+ |+||||||||||||||||||| +..|.|.|++.+|-||||+||++.|.|++.|+|+++||.|
T Consensus 119 PFNPLl~et~el~r~dlg~R~i~EQVSHHPPiSAfhaEgl~~dF~fhGsi~PklkFWgksvea~Pkgtitle~~k~nEaY 198 (445)
T KOG2209|consen 119 PFNPLLGETYELEREDLGFRFISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVEAEPKGTITLELLKHNEAY 198 (445)
T ss_pred CCcchhhhhhhheecccceEEeehhhccCCChhHhhhcccCcceEEeeeecccceeccceeecCCCceEEEEecccCcce
Confidence 9999999999998854 999999999999999999999 7889999999999999999999999999999999999999
Q ss_pred EEeCCCceeeeeeccceeEecCCcEEEEeCCCCCEEEEEEeeCccccCceeEEEEEEECCCCCceEEEeeeecceeeeee
Q 012776 221 DLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQP 300 (456)
Q Consensus 221 ~~~~P~~~v~nii~G~~~ve~~G~~~I~~~~tg~~a~i~F~~~~~~g~~~~~V~G~V~~~~g~~~~~i~G~W~~~l~~~~ 300 (456)
+|+.|+++|+|||+|++|||.+|.|.|+|++||++|+++|+++|+||+..|+|+|+|.|++.++++.|.|+|.+.|....
T Consensus 199 tWtnp~CcvhNiIvGklwieqyg~~eI~nh~Tg~~~vl~Fk~~G~~gk~lHkVEG~i~d~~k~kl~~lYGkWTe~l~~cd 278 (445)
T KOG2209|consen 199 TWTNPTCCVHNIIVGKLWIEQYGNVEIINHKTGHKCVLNFKPCGLFGKELHKVEGHIQDKSKKKLCALYGKWTECLYSCD 278 (445)
T ss_pred eccCCcceeeeehhhhhhHhhcCcEEEEecCccceeEEecccccccccchhheeehhhccccccchhhhccHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999988899999999998876422
Q ss_pred CC------------------------C---CCCcCCCCC-------ceEEEeeccCCCC--CccccceeecccCCCCC-C
Q 012776 301 CD------------------------S---EGEPLPGTE-------LKEVWRVADAPED--DKYQYTYFTHKLNSFDT-A 343 (456)
Q Consensus 301 ~~------------------------~---~g~~l~~~~-------~~~lW~~~~~p~~--~~~~ft~fa~~lN~~~~-~ 343 (456)
.. + +.-|.++++ .+.||.+++.|++ ++|+||.||+.||++++ +
T Consensus 279 ~esf~~~~Kq~~r~~~~r~~s~~~~~see~dd~P~~ds~~v~~iPgSk~LW~~n~rP~n~~~~y~FT~FalsLNem~~~M 358 (445)
T KOG2209|consen 279 PESFDAFKKQDKRNTEERKNSKQMSTSEELDDMPVPDSESVFIIPGSKLLWRINPRPPNSAQMYNFTSFALSLNEMDKGM 358 (445)
T ss_pred HHHHHHHHHhhhhcchhhhhhccCCchhhccCCCCCCcceeEecCCCeEEEEecCCCCCHHHhhchhhheeehhhhccCc
Confidence 10 0 001222222 3579999999987 69999999999999988 5
Q ss_pred CCcCCCCCcccchhhHHHHcCCchhhHHHHHHHHHHHHHHHHHHHhcCCCceecceeecCCCCCCCCCCcceEEEcCcch
Q 012776 344 PKKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYS 423 (456)
Q Consensus 344 ~~~l~PtDSR~R~D~~aLe~Gd~~~A~~eK~~LEe~QR~~rk~R~~~~~~w~Pr~F~~~~d~~~~~~~~~~~~~y~g~Yw 423 (456)
.+.|+|||||+|||+++||+|++|.|.++|+||||+||+.|+.|.+....|+||||.+..++.+ +...|.|.|+||
T Consensus 359 ~~tl~pTD~RlRpDi~~mE~G~~D~AseeK~rlEEkQRe~Rk~rs~~~~dw~~rWF~~~~np~t----~~~dWlYsGgYw 434 (445)
T KOG2209|consen 359 ESTLPPTDCRLRPDIRAMENGNIDQASEEKKRLEEKQREARKNRSKSEEDWKTRWFHQGPNPYT----GAQDWLYSGGYW 434 (445)
T ss_pred ccccCCcccccCchhhhhhcCCcchhHHHHHHHHHHHHHHHhhcccccccCcchhcccCCCCCC----CcccceeecCcc
Confidence 6689999999999999999999999999999999999999999988899999999999988754 335699999999
Q ss_pred hc
Q 012776 424 EL 425 (456)
Q Consensus 424 ~~ 425 (456)
+.
T Consensus 435 dR 436 (445)
T KOG2209|consen 435 DR 436 (445)
T ss_pred cc
Confidence 75
No 3
>PF01237 Oxysterol_BP: Oxysterol-binding protein ; InterPro: IPR000648 A number of eukaryotic proteins that seem to be involved with sterol synthesis and/or its regulation have been found [] to be evolutionary related. These include mammalian oxysterol-binding protein (OSBP), a protein of about 800 amino-acid residues that binds a variety of oxysterols (oxygenated derivatives of cholesterol); yeast OSH1, a protein of 859 residues that also plays a role in ergosterol synthesis; yeast proteins HES1 and KES1, highly related proteins of 434 residues that seem to play a role in ergosterol synthesis; and yeast hypothetical proteins YHR001w, YHR073w and YKR003w.; PDB: 3SPW_A 1ZI7_C 1ZHW_A 1ZHX_A 1ZHY_A 1ZHZ_A 1ZHT_A.
Probab=100.00 E-value=6.1e-102 Score=794.72 Aligned_cols=350 Identities=41% Similarity=0.742 Sum_probs=270.9
Q ss_pred hHHHHHHhccCcccCCCcccCcccccccchHHHhhhccccHHHHhhhhcCCChHHHHHHHHHHHhhhhhh-ccccCCCCC
Q 012776 68 NYWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFA-YRRAWKPFN 146 (456)
Q Consensus 68 siw~~lk~~IG~DLts~vslPv~i~EP~S~LQr~ae~~ey~~lL~~Aa~~~dp~eRm~~V~af~iS~~~~-~~r~~KPfN 146 (456)
|||++||++||+||++ |||||+||||+|+|||+||+|+|++||++|+.++||++||++|++|++|+|+. ..|++||||
T Consensus 1 s~w~~lK~~~G~dLs~-islPv~~~eP~S~Lqr~~~~~~y~~lL~~Aa~~~d~~eR~~~V~~f~~S~~~~~~~~~~KPfN 79 (354)
T PF01237_consen 1 SIWSFLKQKIGKDLSR-ISLPVFFNEPRSFLQRLAEDFEYPDLLDKAAEEDDPLERMLYVAAFALSSYSSTPGRTKKPFN 79 (354)
T ss_dssp HHHHHHHHT--S-GGG-S---GGGEEEEEGGGGGGGGSSSHHHHHGGGGS-HHHHHHHHHHHHHHHHHHHHHHHHHEEE-
T ss_pred CHHHHhhhcCCCChhc-CccCceecCCCcHHHhhhhhhhChHHHhccCCCCCHHHHHHHHHHHHHhhhhhhcCCCCcCcC
Confidence 6899999999999986 99999999999999999999999999999999999999999999999999987 567889999
Q ss_pred CCCCCeEEEEecCcEEEEeeecccCCcceEEEEeCceEEEEEeeeeeeeEEeeEEEEEEeeEEEEEEcCCcEEEEEeCCC
Q 012776 147 PVLGETFEMVNHGGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPP 226 (456)
Q Consensus 147 PILGETfe~~~~~g~~fiaEQVSHHPPISAf~~e~~~~~~~~~~~~kskF~G~Sv~v~~~G~~~l~l~~~ge~Y~~~~P~ 226 (456)
||||||||+..++|++|+||||||||||||||+++++|.++++..+++||+|+||++.+.|..+|+|.++||+|+|++|+
T Consensus 80 PiLGETfe~~~~~~~~~~aEQVSHHPPisa~~~~~~~~~~~g~~~~~~kf~g~sv~~~~~G~~~i~f~~~~e~Y~~~~p~ 159 (354)
T PF01237_consen 80 PILGETFELVRPDGTRFIAEQVSHHPPISAFHAEGRGWKFYGHIEPKSKFWGNSVEVNPIGKVTITFPDGGETYTWTKPT 159 (354)
T ss_dssp --TT-EE--TT-T-EEEEEEEEETTTTEEEEEEEETTEEEEEEEEEEEEE-TT-EEEEEEEEEEEEET--TEEEEEE--S
T ss_pred CCCcceeeeccCceEEEEEecccCCCCceEEEEEcCCEEEEEEEeeeEEEeceEEEEEECCcEEEEEcCCceEEEEecCc
Confidence 99999999986689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeeccceeEecCCcEEEEeCCCCCEEEEEEeeCccccCceeEEEEEEECCCCCceEEEeeeecceeeeeeCCCCCC
Q 012776 227 TKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQPCDSEGE 306 (456)
Q Consensus 227 ~~v~nii~G~~~ve~~G~~~I~~~~tg~~a~i~F~~~~~~g~~~~~V~G~V~~~~g~~~~~i~G~W~~~l~~~~~~~~g~ 306 (456)
++|+|||+|++|+|+.|+|+|+|++||++|+|+|+++||||++.+.|+|+|++.+++++++|.|+|++.|.+......+
T Consensus 160 ~~i~gi~~G~~~~e~~G~~~i~~~~tg~~~~i~f~~~~~f~~~~~~v~G~I~~~~~~~~~~i~G~W~~~i~~~~~~~~~- 238 (354)
T PF01237_consen 160 TYIRGIIFGKRYIEHVGKMVITCHKTGLKAEIEFKPKGWFSGKSNEVEGKIYDSKGKPIYKISGKWDEEIYIKDVKNDS- 238 (354)
T ss_dssp EEEESTTTTS-EEEEESEEEEEET-TS-EEEEEEETSSSTSSSTTEEEEEEESSGGG-SEEEEEETTSEEEEEETT----
T ss_pred EEEeeeecccEEEEecCCEEEEcCCcceEEEEEEecCCcccccceeeEEEEEEccCceeEEeeeeeCCeEEEEeccccc-
Confidence 9999999999999999999999999999999999999999999999999999988899999999999999998765221
Q ss_pred cCCCCCceEEEeeccCCCC--CccccceeecccCCCCCCC-CcCCCCCcccchhhHHHHcCCchhhHHHHHHHHHHHHHH
Q 012776 307 PLPGTELKEVWRVADAPED--DKYQYTYFTHKLNSFDTAP-KKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAE 383 (456)
Q Consensus 307 ~l~~~~~~~lW~~~~~p~~--~~~~ft~fa~~lN~~~~~~-~~l~PtDSR~R~D~~aLe~Gd~~~A~~eK~~LEe~QR~~ 383 (456)
...+...+|++++.|.. ..|+||.||+.||++++.. +.++|||||+|||++||++||+++|+++|++|||+||++
T Consensus 239 --~~~~~~~lw~~~~~~~~~~~~~~ft~fa~~LNe~~~~~~~~~~ptDSr~R~d~~al~~gd~~~A~~eK~~lEe~QR~~ 316 (354)
T PF01237_consen 239 --DTGESKLLWDANPLPPNPKKYYGFTQFAIPLNELTPELEEKLPPTDSRWRPDQRALENGDIDKAQEEKKRLEEKQRAD 316 (354)
T ss_dssp ---GGGEEEEEETTTS-SS--B----------G-------G-GS-TTBHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHH
T ss_pred --cCCCceEEEECCCCcccccceecccccccccccccccccccCCchhccchHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 12346789999998875 5799999999999998744 489999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCceecceeecCCCCCCCCCCcceEEEcCcchhc
Q 012776 384 KRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYSEL 425 (456)
Q Consensus 384 rk~R~~~~~~w~Pr~F~~~~d~~~~~~~~~~~~~y~g~Yw~~ 425 (456)
||+|+++|.+|+||||++..|+.+ +.+.|+|+|+||+.
T Consensus 317 rk~R~~~~~~w~Pr~F~~~~d~~~----~~~~w~~~g~YW~~ 354 (354)
T PF01237_consen 317 RKERKEKGEEWKPRWFEKVEDPST----EEEEWVYKGGYWER 354 (354)
T ss_dssp HHHHHHCT--GGGSSEEEEE-SSS------T-----------
T ss_pred HHHHHHcCCCccCCeEEECCCCCC----ccccccccccccCC
Confidence 999999999999999999987653 45679999999984
No 4
>KOG2210 consensus Oxysterol-binding protein [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-73 Score=575.36 Aligned_cols=327 Identities=27% Similarity=0.392 Sum_probs=284.3
Q ss_pred cccchhHHHHHHh-ccCcccCCCcccCcccccccchHHHhhhccccHHHHhhhhcCCChHHHHHHHHHHHhhhhhhccc-
Q 012776 63 QEERDNYWKMMQK-YIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLVYASSWALSIYFAYRR- 140 (456)
Q Consensus 63 ~e~~~siw~~lk~-~IG~DLts~vslPv~i~EP~S~LQr~ae~~ey~~lL~~Aa~~~dp~eRm~~V~af~iS~~~~~~r- 140 (456)
++.+.-||.++++ ..|||||+ |+||+|++||+|+||+++++|.|+|||..|...+||++||+.|++|++|+++...+
T Consensus 31 e~~~s~i~~L~sq~rpg~DLs~-v~LPtfile~rs~Le~~~~~~~~~dll~~~~~~~~p~~R~~~VvkwylS~~~~~~~~ 109 (392)
T KOG2210|consen 31 EEGKSIILDLLSQLRPGMDLSR-VVLPTFILEPRSLLEKYTDFSYHPDLLLEASSEADPLERMLAVVKWYLSGFHAGPKG 109 (392)
T ss_pred hhccceeecHhhhccCCCCccc-ccchhhhhhhHHHHHHhhhhhhccchhcccccCCCHHHHhhhheeeeehhccccccc
Confidence 5566778888754 79999985 99999999999999999999999999999999999999999999999999998665
Q ss_pred cCCCCCCCCCCeEEEEec-------CcEEEEeeecccCCcceEEEEeCc--eEEEEEeeeeeeeEEeeEEEEEEeeEEEE
Q 012776 141 AWKPFNPVLGETFEMVNH-------GGVTFIAEQVSHHPPMSAGHAENE--HFIYDVTSKLRTKFLGNSIDVYPVGRTRV 211 (456)
Q Consensus 141 ~~KPfNPILGETfe~~~~-------~g~~fiaEQVSHHPPISAf~~e~~--~~~~~~~~~~kskF~G~Sv~v~~~G~~~l 211 (456)
.+|||||||||||.|.+. ..+.|+||||||||||||||++++ ++.+.++.++|+||.|+|+.|.+.|..+|
T Consensus 110 ~~~PyNPILGEtF~~~w~~~~~p~~~~~~~iAEQVSHHPPvSAf~~~~~~~~i~v~g~v~~kSkF~G~s~~V~~~G~~~l 189 (392)
T KOG2210|consen 110 RKKPYNPILGETFTCHWKYPPHPSKGDTVFVAEQVSHHPPVSAFYVTCPKKGIQVDGHVWAKSKFLGNSIAVAMIGKGVL 189 (392)
T ss_pred ccCCCCccchhhcccccccCCCCCCceEEEEeecccCCCCcceeeEEccccCeEEEEEEeecccccccceeEEEcCCcEE
Confidence 456999999999998762 578999999999999999999875 58889999999999999999999999999
Q ss_pred EEcCCcEEEEEeCCCceeeeeeccceeEecCCcEEEEeCCCCCEEEEEEeeCccccCceeEEEEEEECCC-CCceEEEee
Q 012776 212 TLKRDGVVLDLVPPPTKVHNLIFGRTWIDSPGDMVMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYDAA-EQPKILMTG 290 (456)
Q Consensus 212 ~l~~~ge~Y~~~~P~~~v~nii~G~~~ve~~G~~~I~~~~tg~~a~i~F~~~~~~g~~~~~V~G~V~~~~-g~~~~~i~G 290 (456)
+|.+++|+|.+|+|.++++|+|+|.+|||++|++.|.|++|++.+.++|..++|+|+..+.+.+.|+... .+..+.|+|
T Consensus 190 ~ll~~~E~Y~~t~P~~~~rg~~~~~p~velggkv~I~c~kt~~~a~~~~~~~~f~g~~~s~~~~~ik~~~~~~~~~~i~G 269 (392)
T KOG2210|consen 190 KLLDHDETYLITFPNAYARGILLGAPWVELGGKVVIECPKTGLSAILESILKPFLGGKNSFNARSIKGPIDKKDFCSISG 269 (392)
T ss_pred EEEecCcceeeccCCceeeeeeeccceEecCceEEEEcCCcceeeeEeeccCcccccccccceEEEEcccccccccccce
Confidence 9999999999999999999999999999999999999999999999999999999999999999998654 346678999
Q ss_pred eecceeeeeeCCCCCCcCCCCCceEEEeeccCCCCCccccceeecccCCCCCCC------CcCCCCCcccc--hhhHHHH
Q 012776 291 KWNESMSYQPCDSEGEPLPGTELKEVWRVADAPEDDKYQYTYFTHKLNSFDTAP------KKLLPSDSRLR--PDRYALE 362 (456)
Q Consensus 291 ~W~~~l~~~~~~~~g~~l~~~~~~~lW~~~~~p~~~~~~ft~fa~~lN~~~~~~------~~l~PtDSR~R--~D~~aLe 362 (456)
+||+.|+++..++.. .|...+ .+.++..+ .++-|.+||+. .+++||.
T Consensus 270 ~W~~~~~~k~~~~~~----------~~~~~d---------------~~~~~~~~~~v~pLeEQ~e~ESrrlWk~Vt~ai~ 324 (392)
T KOG2210|consen 270 EWDGVMYAKYAKSGE----------SRNFVD---------------CKKLPVTKPKVRPLEEQGEYESRRLWKEVTEAIL 324 (392)
T ss_pred eecccEEEEEcCCCc----------eeeccc---------------ccccCcCCCCcCChHHcCcHHHHHHHHHHHHHHH
Confidence 999999998765321 121111 11111111 24457889995 5899999
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHhcCCCceecceeecCCCCCCCCCCcceEEEcCcch
Q 012776 363 KGDLSKAGSEKSRLEERQRAEKRIREAKDDMFTPKWFDLSDEVTPTPWGDLEVYRYNGKYS 423 (456)
Q Consensus 363 ~Gd~~~A~~eK~~LEe~QR~~rk~R~~~~~~w~Pr~F~~~~d~~~~~~~~~~~~~y~g~Yw 423 (456)
.||++.|+++|..|||+||++||+|++.|++|+||||+..++. +.|.|...-+
T Consensus 325 ~~d~~~Ate~K~~iEe~QR~~ak~ree~g~~W~pk~F~~~~~~--------~~~~~~~~~~ 377 (392)
T KOG2210|consen 325 AGDIEQATEEKFELEEKQRELAKKREESGEEWKPKLFKVDEDG--------GDWDYRNYLP 377 (392)
T ss_pred hccHHHHhHHHhHHHHHHHHHHHHHHHhCCcceecceeEcCCC--------CCcccccccc
Confidence 9999999999999999999999999999999999999988763 2377665444
No 5
>PF02084 Bindin: Bindin; InterPro: IPR000775 Bindin, the major protein component of the acrosome granule of sea urchin sperm, mediates species-specific adhesion of sperm to the egg surface during fertilisation [, ]. The protein coats the acrosomal process after externalisation by the acrosome reaction; it binds to sulphated, fucose-containing polysaccharides on the vitelline-layer receptor proteoglycans that cover the egg plasma membrane. Bindins from different genera show high levels of sequence similarity in both the mature bindin domain and in the probindin precursor region. The most highly conserved region is a 42-residue segment in the central portion of the mature bindin protein. This domain may be responsible for conserved functions of bindin, while the more highly divergent flanking regions may be responsible for its species-specific properties [].; GO: 0007342 fusion of sperm to egg plasma membrane
Probab=45.01 E-value=48 Score=32.33 Aligned_cols=51 Identities=27% Similarity=0.372 Sum_probs=34.9
Q ss_pred HHHHHHhccCcccCCCcccCcccccccchHHHhhhccccHHHHhhhhcCCChHHHHH
Q 012776 69 YWKMMQKYIGADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECEDPYMRLV 125 (456)
Q Consensus 69 iw~~lk~~IG~DLts~vslPv~i~EP~S~LQr~ae~~ey~~lL~~Aa~~~dp~eRm~ 125 (456)
|+.-||-.+|. |+ |-|||-||.|..+==.|-..-.|++||- .+-||.-|=.
T Consensus 105 vm~~ikavLga--TK-iDLPVDINDPYDlGLLLRhLRHHSNLLA---nIgdP~Vreq 155 (238)
T PF02084_consen 105 VMEDIKAVLGA--TK-IDLPVDINDPYDLGLLLRHLRHHSNLLA---NIGDPEVREQ 155 (238)
T ss_pred HHHHHHHHhcc--cc-cccccccCChhhHHHHHHHHHHHHHHHh---hcCCHHHHHH
Confidence 45667777885 54 8999999999876433334445678875 4567766644
No 6
>KOG3205 consensus Rho GDP-dissociation inhibitor [Signal transduction mechanisms]
Probab=40.73 E-value=1.4e+02 Score=28.56 Aligned_cols=109 Identities=17% Similarity=0.277 Sum_probs=57.9
Q ss_pred CcEEEEeeecccCCcceEEEEeCceEEEEEeeeeeeeEEeeEEEEEEeeEEEEEEcCCcEEEEEeCCCceeeeeecccee
Q 012776 159 GGVTFIAEQVSHHPPMSAGHAENEHFIYDVTSKLRTKFLGNSIDVYPVGRTRVTLKRDGVVLDLVPPPTKVHNLIFGRTW 238 (456)
Q Consensus 159 ~g~~fiaEQVSHHPPISAf~~e~~~~~~~~~~~~kskF~G~Sv~v~~~G~~~l~l~~~ge~Y~~~~P~~~v~nii~G~~~ 238 (456)
.++.+++|+ .|||+- +.+...+.++.+.++.|. .|-.|....---.-|+|+.|=.|
T Consensus 70 ~~LtLl~~~---r~pi~l----------dlt~~~~~~~k~~~f~iK-----------EGs~Y~lki~F~Vq~eIvSGLrY 125 (200)
T KOG3205|consen 70 LKLTLLSEG---RPPIVL----------DLTGDLSPELKKQWFTIK-----------EGSEYRLKISFRVQREIVSGLRY 125 (200)
T ss_pred EEEEEEeCC---CCCeEE----------eCCCCccccccCceEEee-----------cCcEEEEEEEEEEeeheecccee
Confidence 356777776 677763 333333333555555443 23333322221223567777777
Q ss_pred EecCCcEEEEeCCC-------CCEEEEEEe-------eCccccCceeEEEEEEECCCCCceEEEeeeec
Q 012776 239 IDSPGDMVMTNLTT-------GDKVVLYFQ-------PCGWFGAGRYEVDGYVYDAAEQPKILMTGKWN 293 (456)
Q Consensus 239 ve~~G~~~I~~~~t-------g~~a~i~F~-------~~~~~g~~~~~V~G~V~~~~g~~~~~i~G~W~ 293 (456)
+.+.=..=|+-.++ |-+++.+.. |+|+|..+.|.+.+...|-+.+ +-+.=.|+
T Consensus 126 ~q~v~r~Gv~VDk~~~MlGSy~P~~e~ye~~~p~eeAPsGmlaRG~Ys~~skF~DDDk~--~hLe~~w~ 192 (200)
T KOG3205|consen 126 VQTVYRTGVKVDKTKYMLGSYGPQAEPYEFVTPEEEAPSGMLARGSYSAKSKFTDDDKT--CHLEWNWT 192 (200)
T ss_pred eeEEeecceEEeehhhhcccCCCCCcceeeeCCcccCCccceeecceeeeeEEecCCCc--eEEEEEEE
Confidence 76644333333222 222333332 6789999999999988876543 33433443
No 7
>KOG1693 consensus emp24/gp25L/p24 family of membrane trafficking proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=32.37 E-value=4.7e+02 Score=25.27 Aligned_cols=120 Identities=19% Similarity=0.311 Sum_probs=63.4
Q ss_pred CCCCEEEEEEeeCccccCceeEEEEEEECCCCCceEEEeeeecceeeeeeCCCCCCcCCCCCceEEEeeccCCCCCcccc
Q 012776 251 TTGDKVVLYFQPCGWFGAGRYEVDGYVYDAAEQPKILMTGKWNESMSYQPCDSEGEPLPGTELKEVWRVADAPEDDKYQY 330 (456)
Q Consensus 251 ~tg~~a~i~F~~~~~~g~~~~~V~G~V~~~~g~~~~~i~G~W~~~l~~~~~~~~g~~l~~~~~~~lW~~~~~p~~~~~~f 330 (456)
+++.++.++|+-- .|+.+.|+-.|.+++|+++++-.++=-+...++. ..+|+ ..-.+ .+ +|
T Consensus 42 ~~~~~~~~~fqV~---tGG~fDVD~~I~aPdgkvI~~~~kk~~~~~~f~a-e~~G~------Y~fCF------sN---~f 102 (209)
T KOG1693|consen 42 KDDDTTSFEFQVQ---TGGHFDVDYDIEAPDGKVIYSEKKKRYDSFLFKA-EGKGE------YTFCF------SN---EF 102 (209)
T ss_pred cCCceEEEEEEEE---eCCceeeEEEEECCCCCEEeeccccccccEEEEE-ecceE------EEEEe------cC---cc
Confidence 4555688888753 3478899999999999999887766554444431 12221 00000 01 24
Q ss_pred ceeecccCCCCCC---CCcCCCCCcccchhhHHHHcCCchhhHHHHHHHHHHHHHHHHHHHhcC
Q 012776 331 TYFTHKLNSFDTA---PKKLLPSDSRLRPDRYALEKGDLSKAGSEKSRLEERQRAEKRIREAKD 391 (456)
Q Consensus 331 t~fa~~lN~~~~~---~~~l~PtDSR~R~D~~aLe~Gd~~~A~~eK~~LEe~QR~~rk~R~~~~ 391 (456)
.+|.+++-.++.. ...+.|.++-.-+++.-+++- .++-.+.=+.|+.-|-. -|.|+.+|
T Consensus 103 stf~~Kiv~~~~q~~~~~~~~~~~~~~~~~~~~mena-~~~I~~~L~~I~~~q~y-~R~RE~rn 164 (209)
T KOG1693|consen 103 STFSHKIVYMDFQVGEEPPLHPAVSNRDTALTQMENA-IVEIHRALNKIDDTQTY-YRLREARN 164 (209)
T ss_pred ccccceEeeehhhhccccccCccccccchHHHHHHHH-HHHHHHHHHHHHHHHHH-HHHHHhcC
Confidence 4554444333221 123456666666665555542 33333334445555554 23444443
No 8
>PF10504 DUF2452: Protein of unknown function (DUF2452); InterPro: IPR019534 This entry contains proteins that have no known function.
Probab=29.42 E-value=1.5e+02 Score=27.49 Aligned_cols=86 Identities=16% Similarity=0.225 Sum_probs=44.9
Q ss_pred CcccCCCcccCcccccccchHHHhhhccccHHHHhhhhcCCC---hHHHHHHHHHHHhhhhh------hccccCCCCCCC
Q 012776 78 GADVQSLVTLPVFISEPNSVLQRMAELMEYSHLLDLADECED---PYMRLVYASSWALSIYF------AYRRAWKPFNPV 148 (456)
Q Consensus 78 G~DLts~vslPv~i~EP~S~LQr~ae~~ey~~lL~~Aa~~~d---p~eRm~~V~af~iS~~~------~~~r~~KPfNPI 148 (456)
|..|.+ +.||.-.-|-.-|=-+|...+-++-+.+|..+.. -.++|...-.=|-.... ....++==|.|+
T Consensus 14 g~~~~~--~~~~~~~~~~~dlv~la~~iq~Ad~~~~~~t~~kL~~I~eQi~~Lq~QA~~ile~~~~~~~l~~A~cnF~pi 91 (159)
T PF10504_consen 14 GVQLVS--PYRVSRLGDPFDLVDLAQQIQKADSAMRANTCNKLEVIAEQIRFLQEQARKILEEAERNEELHHAKCNFEPI 91 (159)
T ss_pred CccccC--cccccccCCHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcccCceec
Confidence 555644 5677777444455555555555554444432211 12222222221111111 122456679999
Q ss_pred CCCeEEEEe-cCcEEEEe
Q 012776 149 LGETFEMVN-HGGVTFIA 165 (456)
Q Consensus 149 LGETfe~~~-~~g~~fia 165 (456)
.|+||++.. .+|..|++
T Consensus 92 pG~iYhLY~r~~G~~ylS 109 (159)
T PF10504_consen 92 PGQIYHLYRRENGQDYLS 109 (159)
T ss_pred CCCEEEEEECCCCCEEEE
Confidence 999999865 56766664
No 9
>PF14254 DUF4348: Domain of unknown function (DUF4348); PDB: 3SBU_A.
Probab=25.54 E-value=86 Score=31.48 Aligned_cols=42 Identities=26% Similarity=0.536 Sum_probs=25.1
Q ss_pred eCCCceeeeeeccceeEecCCcE-EEEeCCCCCEEEEEEeeCc
Q 012776 223 VPPPTKVHNLIFGRTWIDSPGDM-VMTNLTTGDKVVLYFQPCG 264 (456)
Q Consensus 223 ~~P~~~v~nii~G~~~ve~~G~~-~I~~~~tg~~a~i~F~~~~ 264 (456)
.+|...+.||++|..|.+...++ .|..-.+|+..++.|+.++
T Consensus 224 ~lP~~~i~NI~YGQky~~s~~KIl~~rGi~NG~e~~l~Fk~~~ 266 (273)
T PF14254_consen 224 ELPKGKIYNINYGQKYTESNQKILVFRGIANGLETELYFKKRG 266 (273)
T ss_dssp ---SSEEEEEESS----T-SEEEEEEEESSS--EEEEEEEEET
T ss_pred cCCccceeeeecccccCCCCceEEEEEeecCceeEEEEEEEcC
Confidence 57889999999999999944443 3456789999999998653
No 10
>PF14038 YqzE: YqzE-like protein
Probab=24.50 E-value=36 Score=25.83 Aligned_cols=17 Identities=29% Similarity=0.749 Sum_probs=12.6
Q ss_pred HHHHHhcCCCceeccee
Q 012776 384 KRIREAKDDMFTPKWFD 400 (456)
Q Consensus 384 rk~R~~~~~~w~Pr~F~ 400 (456)
|.+|++...+|.-|||-
T Consensus 28 k~~rK~~k~p~~~rWFG 44 (54)
T PF14038_consen 28 KEERKEEKEPFSYRWFG 44 (54)
T ss_pred HHHHHhcCCcHHHHHHh
Confidence 44555667899999994
No 11
>PF12915 DUF3833: Protein of unknown function (DUF3833); InterPro: IPR024409 This is a family of uncharacterised proteins found in Proteobacteria.
Probab=21.51 E-value=2.7e+02 Score=25.95 Aligned_cols=58 Identities=17% Similarity=0.390 Sum_probs=37.3
Q ss_pred EEeeCccccCceeEEEEEEECCCCCc----eEEEeeeecceee-----eeeCCCCCCcCCCCCceEEEeeccCCC
Q 012776 259 YFQPCGWFGAGRYEVDGYVYDAAEQP----KILMTGKWNESMS-----YQPCDSEGEPLPGTELKEVWRVADAPE 324 (456)
Q Consensus 259 ~F~~~~~~g~~~~~V~G~V~~~~g~~----~~~i~G~W~~~l~-----~~~~~~~g~~l~~~~~~~lW~~~~~p~ 324 (456)
.|....||.+. -.-.|.|.|..|+. ...|.|+|++..- +.+. +|+ ...++|+..+..+
T Consensus 22 ~~~l~~fF~G~-~~A~G~~~dr~G~v~rrF~v~i~g~w~g~~~tL~E~F~y~--DGe-----~q~R~W~l~~~~~ 88 (164)
T PF12915_consen 22 KFDLEEFFNGK-LVAWGMFQDRSGKVTRRFTVDIDGSWDGNTGTLDEDFVYD--DGE-----TQTRVWTLTKTGD 88 (164)
T ss_pred ccCHHHHCCCc-EEEEEEEECCCCCEEEEEEEEEEEEEECCEEEEEEEEEEC--CCC-----EEEEEEEEEECCC
Confidence 45556677654 45689999999875 3568999997532 2222 222 3467898877654
No 12
>COG2154 Pterin-4a-carbinolamine dehydratase [Coenzyme metabolism]
Probab=20.61 E-value=32 Score=29.48 Aligned_cols=19 Identities=37% Similarity=0.518 Sum_probs=15.6
Q ss_pred cEEEEeeecccCCcceEEE
Q 012776 160 GVTFIAEQVSHHPPMSAGH 178 (456)
Q Consensus 160 g~~fiaEQVSHHPPISAf~ 178 (456)
.+-.+|||.-|||=|+..|
T Consensus 48 ~vA~~Ae~~~HHPdi~~~y 66 (101)
T COG2154 48 RVAEIAEKLNHHPDIEVVY 66 (101)
T ss_pred HHHHHHHHhCCCCCeEEEe
Confidence 3456899999999999865
Done!